An ancient Roman bowl embedded in a soil sample: surface shaded three dimensional display using data from a multi-detector CT.

PubMed

De Maeseneer, M; Buls, N; Cleeren, N; Lenchik, L; De Mey, J

2006-01-01

We present an unusual application of multidetector CT and shaded surface rendering in the investigation of a soil sample, containing an ancient Roman bronze bowl. The CT findings were of fundamental importance in helping the archaeologists study the bronze bowl from the soil sample.

Nondestructive characterization of municipal-solid-waste-contaminated surface soil by energy-dispersive X-ray fluorescence and low-Z (atomic number) particle electron probe X-ray microanalysis.

PubMed

Gupta, Dhrubajyoti; Ghosh, Rita; Mitra, Ajoy K; Roy, Subinit; Sarkar, Manoranjan; Chowdhury, Subhajit; Bhowmik, Asit; Mukhopadhyay, Ujjal; Maskey, Shila; Ro, Chul-Un

2011-11-01

The long-term environmental impact of municipal solid waste (MSW) landfilling is still under investigation due to the lack of detailed characterization studies. A MSW landfill site, popularly known as Dhapa, in the eastern fringe of the metropolis of Kolkata, India, is the subject of present study. A vast area of Dhapa, adjoining the current core MSW dump site and evolving from the raw MSW dumping in the past, is presently used for the cultivation of vegetables. The inorganic chemical characteristics of the MSW-contaminated Dhapa surface soil (covering a 2-km stretch of the area) along with a natural composite (geogenic) soil sample (from a small countryside farm), for comparison, were investigated using two complementary nondestructive analytical techniques, energy-dispersive X-ray fluorescence (EDXRF) for bulk analysis and low-Z (atomic number) particle electron probe X-ray microanalysis (low-Z particle EPMA) for single-particle analysis. The bulk concentrations of K, Rb, and Zr remain almost unchanged in all the soil samples. The Dhapa soil is found to be polluted with heavy metals such as Cu, Zn, and Pb (highly elevated) and Ti, Cr, Mn, Fe, Ni, and Sr (moderately elevated), compared to the natural countryside soil. These high bulk concentration levels of heavy metals were compared with the Ecological Soil Screening Levels for these elements (U.S. Environment Protection Agency) to assess the potential risk on the immediate biotic environment. Low-Z particle EPMA results showed that the aluminosilicate-containing particles were the most abundant, followed by SiO2, CaCO3-containing, and carbonaceous particles in the Dhapa samples, whereas in the countryside sample only aluminosilicate-containing and SiO2 particles were observed. The mineral particles encountered in the countryside sample are solely of geogenic origin, whereas those from the Dhapa samples seem to have evolved from a mixture of raw dumped MSW, urban dust, and other contributing factors such as wind, precipitation, weather patterns, farming, and water logging, resulting in their diverse chemical compositions and the abundant observation of carbonaceous species. Particles containing C and P were more abundant in the Dhapa samples than in the countryside soil sample, suggesting that MSW-contaminated soils are more fertile. However, the levels of particles containing potentially toxic heavy metals such as Cr, Mn, Ni, Cu, Zn, and/or Pb in the Dhapa samples were significant, corroborated by their high bulk concentration levels (EDXRF), causing deep concern for the immediate environment and contamination of the food chain through food crops.

Micaceous Soil Strength And Permeability Improvement Induced By Microbacteria From Vegetable Waste

NASA Astrophysics Data System (ADS)

Omar, R. C.; Roslan, R.; Baharuddin, I. N. Z.; Hanafiah, M. I. M.

2016-11-01

Green technology method using vegetable waste are introduced in this paper for improvement of phyllite residual soil from UNITEN, Campus. Residual soil from phyllite are known as micaceous soils and it give problem in managing the stability of the slope especially in wet and extensively dry seasons. Micaceous soil are collected using tube sampler technique and mixed with liquid contain microorganism from fermented vegetable waste name as vege-grout to form remolded sample. The remolded sample are classify as 15.0%, 17.5%, 20.00% and 22.5% based on different incremental percentages of vege-grout. The curing time for the sample are 7, 14, 21, 28, and 35 days before the tests were conducted. Observation of the effect of treatment shows 20.0% of liquid contain Bacillus pasteurii and Bacillus Subtilis with 21 days curing time is the optimum value in strengthening the soil and improve the permeability.

Lead (II) removal from natural soils by enhanced electrokinetic remediation.

PubMed

Altin, Ahmet; Degirmenci, Mustafa

2005-01-20

Electrokinetic remediation is a very effective method to remove metal from fine-grained soils having low adsorption and buffering capacity. However, remediation of soil having high alkali and adsorption capacity via the electrokinetic method is a very difficult process. Therefore, enhancement techniques are required for use in these soil types. In this study, the effect of the presence of minerals having high alkali and cation exchange capacity in natural soil polluted with lead (II) was investigated by means of the efficiency of electrokinetic remediation method. Natural soil samples containing clinoptilolite, gypsum and calcite minerals were used in experimental studies. Moreover, a sample containing kaolinite minerals was studied to compare with the results obtained from other samples. Best results for soils bearing alkali and high sorption capacity minerals were obtained upon addition of 3 mol AcH and application of 20 V constant potential after a remediation period of 220 h. In these test conditions, lead (II) removal efficiencies for these samples varied between 60% and 70% up to 0.55 normalized distance. Under the same conditions, removal efficiencies in kaolinite sample varied between 50% and 95% up to 0.9 normalized distance.

Effects of fines content on hydraulic conductivity and morphology of laterite soil as hydraulic barrier

NASA Astrophysics Data System (ADS)

Bello Yamusa, Yamusa; Yunus, Nor Zurairahetty Mohd; Ahmad, Kamarudin; Rahman, Norhan Abd; Sa'ari, Radzuan

2018-03-01

Laterite soil was investigated to find out the effects of fines content and to identify the micro-structural and molecular characteristics to evaluate its potentiality as a compacted soil landfill liner material. Tests were carried out on natural soil and reconstituted soil by dry weight of soil samples to determine the physical and engineering properties of the soil. All tests were carried out on the samples by adopting the British Standard 1377:1990. The possible mechanisms that contributed to the clay mineralogy were analyzed using spectroscopic and microscopic techniques such as field emission scanning electron microscopy (FESEM), energy-dispersive X-ray (EDX) and X-ray diffractometry (XRD). The laterite soil was found to contain kaolinite as the major clay minerals. A minimum of 50% fines content of laterite soil met the required result for hydraulic barriers in waste containment facilities.

Assessment of soil and water contaminants from selected locations in and near the Idaho Army National Guard Orchard Training Area, Ada County, Idaho, 2001-2003

USGS Publications Warehouse

Parliman, D.J.

2004-01-01

In 2001, the National Guard Bureau and the U.S. Geological Survey began a project to compile hydrogeologic data and determine presence or absence of soil, surface-water, and ground-water contamination at the Idaho Army National Guard Orchard Training Area in southwestern Idaho. Between June 2002 and April 2003, a total of 114 soil, surface-water, ground-water, precipitation, or dust samples were collected from 68 sample sites (65 different locations) in the Orchard Training Area (OTA) or along the vehicle corridor to the OTA. Soil and water samples were analyzed for concentrations of selected total trace metals, major ions, nutrients, explosive compounds, semivolatile organics, and petroleum hydrocarbons. Water samples also were analyzed for concentrations of selected dissolved trace metals and major ions. Distinguishing naturally occurring large concentrations of trace metals, major ions, and nutrients from contamination related to land and water uses at the OTA was difficult. There were no historical analyses for this area to compare with modern data, and although samples were collected from 65 locations in and near the OTA, sampled areas represented only a small part of the complex OTA land-use areas and soil types. For naturally occurring compounds, several assumptions were made?anomalously large concentrations, when tied to known land uses, may indicate presence of contamination; naturally occurring concentrations cannot be separated from contamination concentrations in mid- and lower ranges of data; and smallest concentrations may represent the lowest naturally occurring range of concentrations and (or) the absence of contaminants related to land and water uses. Presence of explosive, semivolatile organic (SVOC), and petroleum hydrocarbon compounds in samples indicates contamination from land and water uses. In areas along the vehicle corridor and major access roads within the OTA, most trace metal, major ion, and nutrient concentrations in soil samples were not in the upper 10th percentile of data, but concentrations of 25 metals, ions, or nutrients were in the upper 10th percentile in a puddle sample near the heavy equipment maneuvering area, MPRC-H. The largest concentrations of tin, ammonia, and nitrite plus nitrate (as nitrogen) in water from the OTA were detected in a sample from this puddle. Petroleum hydrocarbons were the most common contaminant, detected in all soil and surface-water samples. An SVOC, bis (2-ethylhexyl) phthalate, a plasticizer, was detected at a site along the vehicle corridor. In Maneuver Areas within the OTA, many soil samples contained at least one trace metal, major ion, or nutrient in the upper 10th percentile of data, and the largest concentrations of cobalt, iron, mercury, titanium, sodium, ammonia, or total phosphorus were detected in 6 of 13 soil samples outside the Tadpole Lake area. The largest concentrations of aluminum, arsenic, beryllium, nickel, selenium, silver, strontium, thallium, vanadium, chloride, potassium, sulfate, and nitrite plus nitrate were detected in soil samples from the Tadpole Lake area. Water from Tadpole Lake contained the largest total concentrations of 19 trace metals, 4 major ions, and 1 nutrient. Petroleum hydrocarbons were detected in 5 soil samples and water from Tadpole Lake. SVOCs related to combustion of fuel or plasticizers were detected in 1 soil sample. Explosive compounds were detected in 1 precipitation sample.In the Impact Area within the OTA, most soil samples contained at least one trace metal, major ion, or nutrient in the upper 10th percentile of data, and the largest concentrations of barium, chromium, copper, manganese, lead, or orthophosphate were detected in 6 of the 18 soil samples. Petroleum hydrocarbons were detected in 4 soil samples, SVOCs in 6 samples, and explosive compounds in 4 samples. In the mobilization and training equipment site (MATES) compound adjacent to the OTA, all soil and water samples contained at lea

GICHD Mine Dog Testing Project - Soil Sample Results No.3

DOE Office of Scientific and Technical Information (OSTI.GOV)

PHELAN, JAMES M.; BARNETT, JAMES L.; BENDER, SUSAN FAE ANN

2003-03-01

A mine dog evaluation project initiated by the Geneva International Center for Humanitarian Demining is evaluating the capability and reliability of mine detection dogs. The performance of field-operational mine detection dogs will be measured in test minefields in Afghanistan and Bosnia containing actual, but unfused landmines. Repeated performance testing over two years through various seasonal weather conditions will provide data simulating near real world conditions. Soil samples will be obtained adjacent to the buried targets repeatedly over the course of the test. Chemical analysis results from these soil samples will be used to evaluate correlations between mine dog detection performancemore » and seasonal weather conditions. This report documents the analytical chemical methods and results from the third batch of soils received. This batch contained samples from Kharga, Afghanistan collected in October 2002.« less

GICHD mine dog testing project : soil sample results #5.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barnett, James L.; Phelan, James M.; Archuleta, Luisa M.

2004-01-01

A mine dog evaluation project initiated by the Geneva International Center for Humanitarian Demining is evaluating the capability and reliability of mine detection dogs. The performance of field-operational mine detection dogs will be measured in test minefields in Afghanistan containing actual, but unfused landmines. Repeated performance testing over two years through various seasonal weather conditions will provide data simulating near real world conditions. Soil samples will be obtained adjacent to the buried targets repeatedly over the course of the test. Chemical analysis results from these soil samples will be used to evaluate correlations between mine dog detection performance and seasonalmore » weather conditions. This report documents the analytical chemical methods and results from the fifth batch of soils received. This batch contained samples from Kharga, Afghanistan collected in June 2003.« less

Selenium content of game meat

DOE Office of Scientific and Technical Information (OSTI.GOV)

Medeiros, L.C.; Belden, R.P.

Selenium (Se) content of elk, deer, bison and beef were measured and compared. Samples were obtained from animals grazed on soil known to contain high, but variable amounts of Se. Beef were feedlot grazed and elk, deer, and bison were from captive or semi-captive herds. Selenium content was determined by graphite furnace after high pressure wet microwave digestion of samples. Deer and bison contained more Se than elk or beef. On a dry weight basis, deer contained more Se than bison. Game species contained more Se than beef. Within samples from male elk and deer and elk and bison ofmore » both genders, there were interactions between specie and muscle effects. Muscle and gender did not significantly influence Se content. The animals from which these samples were taken were supplemented with feeds grown on high Se containing soils, which was reflected in all values. Se values were twofold higher than those previously reported for meat. Those consuming large quantities of game from areas with high Se soil may need to monitor Se intake to avoid consuming excessive quantities.« less

Occurrence and species distribution of pathogenic Mucorales in unselected soil samples from France.

PubMed

Mousavi, B; Costa, J M; Arné, P; Guillot, J; Chermette, R; Botterel, F; Dannaoui, E

2018-04-01

Mucormycosis is a life-threatening invasive fungal disease that affects a variety of patient groups. Although Mucorales are mostly opportunistic pathogens originating from soil or decaying vegetation, there are currently few data on prevalence of this group of fungi in the environment. The aim of the present study was to assess the prevalence and diversity of species of Mucorales from soil samples collected in France. Two grams of soil were homogenized in sterile saline and plated on Sabouraud dextrose agar and RPMI agar supplemented with itraconazole or voriconazole. Both media contained chloramphenicol and gentamicin. The plates were incubated at 35 ± 2 °C and checked daily for fungal growth for a maximum of 7 d. Mucorales were subcultured for purity. Each isolate was identified phenotypically and molecular identification was performed by ITS sequencing. A total of 170 soil samples were analyzed. Forty-one isolates of Mucorales were retrieved from 38 culture-positive samples. Among the recovered isolates, 27 Rhizopus arrhizus, 11 Mucor circinelloides, one Lichtheimia corymbifera, one Rhizopus microsporus and one Cunninghamella bertholletiae were found. Positive soil samples came from cultivated fields but also from other types of soil such as flower beds. Mucorales were retrieved from samples obtained in different geographical regions of France. Voriconazole-containing medium improved the recovery of Mucorales compared with other media. The present study showed that pathogenic Mucorales are frequently recovered from soil samples in France. Species diversity should be further analyzed on a larger number of soil samples from different geographic areas in France and in other countries.

Assessment of Soil-Gas, Surface-Water, and Soil Contamination at the Installation Railhead, Fort Gordon, Georgia, 2008-2009

USGS Publications Warehouse

Landmeyer, James E.; Harrelson, Larry G.; Ratliff, W. Hagan; Wellborn, John B.

2010-01-01

The U.S. Geological Survey, in cooperation with the U.S. Department of the Army Environmental and Natural Resources Management Office of the U.S. Army Signal Center and Fort Gordon, assessed soil gas, surface water, and soil for contaminants at the Installation Railhead (IR) at Fort Gordon, Georgia, from October 2008 to September 2009. The assessment included delineation of organic contaminants present in soil-gas samples beneath the IR, and in a surface-water sample collected from an unnamed tributary to Marcum Branch in the western part of the IR. Inorganic contaminants were determined in a surface-water sample and in soil samples. This assessment was conducted to provide environmental contamination data to Fort Gordon personnel pursuant to requirements of the Resource Conservation and Recovery Act Part B Hazardous Waste Permit process. Soil-gas samples collected within a localized area on the western part of the IR contained total petroleum hydrocarbons; benzene, toluene, ethylbenzene, and total xylenes (referred to as BTEX); and naphthalene above the method detection level. These soil-gas samples were collected where buildings had previously stood. Soil-gas samples collected within a localized area contained perchloroethylene (PCE). These samples were collected where buildings 2410 and 2405 had been. Chloroform and toluene were detected in a surface-water sample collected from an unnamed tributary to Marcum Branch but at concentrations below the National Primary Drinking Water Standard maximum contaminant level (MCL) for each compound. Iron was detected in the surface-water sample at 686 micrograms per liter (ug/L) and exceeded the National Secondary Drinking Water Standard MCL for iron. Metal concentrations in composite soil samples collected at three locations from land surface to a depth of 6 inches did not exceed the U.S. Environmental Protection Agency Regional Screening Levels for industrial soil.

The Effect of Heating During In Situ Remediation on the Dynamics and Activity of Soil Microorganisms

DTIC Science & Technology

2000-10-01

understanding the microbial ecology at the lab-scale. Experiments were performed in three insulated boxes (0.5 m x 0.5 m x 0.1 m) containing medium sand...Lexan® boxes (0.5 m H x 0.5 m W X 0. 1 m H) containing soil from the Piedmont region of North Carolina (Medium sand). Nine soil sampling ports were...Soil Vapor Extraction (SVE) system operates on the principle that organic hydrocarbons contained in contaminated sites can volatize at temperatures

Evaluation of various soil water samplers for virological sampling.

PubMed Central

Wang, D S; Lance, J C; Gerba, C P

1980-01-01

Two commercially available soil water samplers and a ceramic sampler constructed in our laboratories were evaluated for their ability to recover viruses from both tap water and secondary sewage effluent. The ceramic sampler consistently gave the best recoveries of viruses from water samples. Soil columns containing ceramic samplers at various depths provide a simple method for studying virus transport through sewage-contaminated soils. Images PMID:6247976

Spatial distribution of organochlorine contaminants in soil, sediment, and fish in Bikini and Enewetak Atolls of the Marshall Islands, Pacific Ocean.

PubMed

Wang, Jun; Caccamise, Sarah A L; Wu, Liejun; Woodward, Lee Ann; Li, Qing X

2011-08-01

Several nuclear tests were performed at Enewetak and Bikini Atolls in the Marshall Islands between 1946 and 1958. The events at Bikini Atoll involved several ships that were tested for durability during nuclear explosions, and 24 vessels now rest on the bottom of the Bikini lagoon. Nine soil samples were collected from different areas on the two islands of the atoll, and eighteen sediment, nine fish, and one lobster were collected in the vicinity of the sunken ships. Organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), and polychlorinated terphenyls (PCTs) in these samples were analyzed using gas chromatography/ion trap mass spectrometry (GC/ITMS). The average recoveries ranged from 78% to 104% for the different PCB congeners. The limits of detection (LOD) for PCBs, PCTs, DDE, DDT, and dieldrin ranged 10-50 pg g(-1). Some fish from Enewetak contained PCBs at a concentration range of 37-137 ng g(-1), dry weight (dw), and most of the soils from Enewetak showed evidence of PCBs (22-392 ng g(-1)dw). Most of the Bikini lagoon sediment samples contained PCBs, and the highest was the one collected from around the Saratoga, an aircraft carrier (1555 ng g(-1)dw). Some of the fish samples, most of the soil samples, and only one of the sediment samples contained 2,2-bis(4-chlorophenyl)-1,1-dichloroethylene (DDE) and PCBs. In addition to PCBs, the soils from Enewetak Atoll contained PCTs. PCTs were not detected in the sediment samples from Bikini Atoll. The results suggest local pollution sources of PCBs, PCTs, and OCPs. Copyright © 2011. Published by Elsevier Ltd.

Volatilization and mixing in glasses of some Apollo 14 regolith breccias

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vaniman, D.T.; Heiken, G.H.

1989-01-01

Three unique samples can be distinguished by analysis of all glass types, including devitrified glasses, in a suite of 26 Apollo 14 regolith breccias. These unique samples include the well-studied sample 14315, which has an abundance of anorthositic gabbro glasses and devitrified glasses; 14004,77, which has no glasses other than those that match the local soil; and 14076,5, which contains no glasses similar to the local soil or to LKFM. Sample 14076,5 is clearly exotic, for it contains devitrified glasses of anorthositic composition and of a silica-volatilized (HASP) trend that stems from anorthosite; these silica-volatilized glasses contain the new mineralmore » yoshiokite. HASP glasses in this exotic sample and HASP glass spheres that stem from the Apollo 14 soil composition differ greatly from the HASP glasses at Apollo 16. The various HASP glasses can be just as useful as non-volatilized glasses in searching or major crustal or regolith lithologies. 18 refs., 2 figs., 2 tabs.« less

GICHD mine dog testing project - soil sample results #4.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barnett, James L.; Phelan, James M.; Archuleta, Luisa M.

2003-08-01

A mine dog evaluation project initiated by the Geneva International Center for Humanitarian Demining is evaluating the capability and reliability of mine detection dogs. The performance of field-operational mine detection dogs will be measured in test minefields in Afghanistan and Bosnia containing actual, but unfused landmines. Repeated performance testing over two years through various seasonal weather conditions will provide data simulating near real world conditions. Soil samples will be obtained adjacent to the buried targets repeatedly over the course of the test. Chemical analysis results from these soil samples will be used to evaluate correlations between mine dog detection performancemore » and seasonal weather conditions. This report documents the analytical chemical methods and results from the fourth batch of soils received. This batch contained samples from Kharga, Afghanistan collected in April 2003 and Sarajevo, Bosnia collected in May 2003.« less

Radioactivites in returned lunar materials and in meteorites

NASA Technical Reports Server (NTRS)

Fireman, E. L.

1983-01-01

The cosmic-ray, solar-flare, and solar-wind bombardments of lunar rocks and soils and meteorites were studied by measurements of tritium, carbon-14 and argon radioactivity. The radioactivity integrates the bombardment for a time period equal to several half-lines. H-3, Ar-37, Ar-39, C-14. For the interior samples of lunar rocks and for deep lunar soil samples, the amounts of the radioactivities were equal to those calculated for galactic cosmic-ray interactions. The top near-surface samples of lunar rocks and the shallow lunar soil samples show excess amounts of the radioactivities attributable to solar flares. Lunar soil fines contain a large amount of hydrogen due to implanted solar wind. Studies of the H-3 in lunar soils and in recovered Surveyor-3 materials gave an upper limit for the H-3/H ratio in the solar wind of 10 to the -11th power. Solar wind carbon is also implanted on lunar soil fines. Lunar soils collected on the surface contained a 0.14 component attributable to implanted solar wind C-14. The C-14/H ratio attributed to the solar wind from this C-14 excess is approximately 4 x 10 to the -11th power.

High resolution analysis of soil elements with laser-induced breakdown

DOEpatents

Ebinger, Michael H [Santa Fe, NM; Harris, Ronny D [Los Alamos, NM

2010-04-06

The invention is a system and method of detecting a concentration of an element in a soil sample wherein an opening or slot is formed in a container that supports a soil sample that was extracted from the ground whereupon at least a length of the soil sample is exposed via the opening. At each of a plurality of points along the exposed length thereof, the soil sample is ablated whereupon a plasma is formed that emits light characteristic of the elemental composition of the ablated soil sample. Each instance of emitted light is separated according to its wavelength and for at least one of the wavelengths a corresponding data value related to the intensity of the light is determined. As a function of each data value a concentration of an element at the corresponding point along the length of the soil core sample is determined.

History and evaluation of national-scale geochemical data sets for the United States

USGS Publications Warehouse

Smith, David B.; Smith, Steven M.; Horton, John D.

2013-01-01

Six national-scale, or near national-scale, geochemical data sets for soils or stream sediments exist for the United States. The earliest of these, here termed the ‘Shacklette’ data set, was generated by a U.S. Geological Survey (USGS) project conducted from 1961 to 1975. This project used soil collected from a depth of about 20 cm as the sampling medium at 1323 sites throughout the conterminous U.S. The National Uranium Resource Evaluation Hydrogeochemical and Stream Sediment Reconnaissance (NURE-HSSR) Program of the U.S. Department of Energy was conducted from 1975 to 1984 and collected either stream sediments, lake sediments, or soils at more than 378,000 sites in both the conterminous U.S. and Alaska. The sampled area represented about 65% of the nation. The Natural Resources Conservation Service (NRCS), from 1978 to 1982, collected samples from multiple soil horizons at sites within the major crop-growing regions of the conterminous U.S. This data set contains analyses of more than 3000 samples. The National Geochemical Survey, a USGS project conducted from 1997 to 2009, used a subset of the NURE-HSSR archival samples as its starting point and then collected primarily stream sediments, with occasional soils, in the parts of the U.S. not covered by the NURE-HSSR Program. This data set contains chemical analyses for more than 70,000 samples. The USGS, in collaboration with the Mexican Geological Survey and the Geological Survey of Canada, initiated soil sampling for the North American Soil Geochemical Landscapes Project in 2007. Sampling of three horizons or depths at more than 4800 sites in the U.S. was completed in 2010, and chemical analyses are currently ongoing. The NRCS initiated a project in the 1990s to analyze the various soil horizons from selected pedons throughout the U.S. This data set currently contains data from more than 1400 sites. This paper (1) discusses each data set in terms of its purpose, sample collection protocols, and analytical methods; and (2) evaluates each data set in terms of its appropriateness as a national-scale geochemical database and its usefulness for national-scale geochemical mapping.

Micro-PIXE evaluation of radioactive cesium transfer in contaminated soil samples

NASA Astrophysics Data System (ADS)

Fujishiro, F.; Ishii, K.; Matsuyama, S.; Arai, H.; Ishizaki, A.; Osada, N.; Sugai, H.; Kusano, K.; Nozawa, Y.; Yamauchi, S.; Karahashi, M.; Oshikawa, S.; Kikuchi, K.; Koshio, S.; Watanabe, K.; Suzuki, Y.

2014-01-01

Micro-PIXE analysis has been performed on two soil samples with high cesium activity concentrations. These soil samples were contaminated by fallout from the accident at Fukushima Daiichi Nuclear Power Plant. One exhibits a radioactive cesium transfer of ˜0.01, and the other shows a radioactive cesium transfer of less than 0.001, even though both samples have high cesium activity concentrations exceeding 10,000 Bq/kg. X-ray spectra and elemental images of the soil samples revealed the presence of chlorine, which can react with cesium to produce an inorganic soluble compound, and phosphorus-containing cesium-capturable organic compounds.

Soil Biogeochemical and Biophysical Footprint of Forest to Pasture Conversion in the Western Pyrenees Mountains, France

NASA Astrophysics Data System (ADS)

Leigh, D.; Gragson, T. L.

2017-12-01

Summits of the humid-temperate western Pyrenees were converted from mixed forests to managed grasslands thousands of years ago, including use of fire. We hypothesize differences in soil chemical and physical traits evolved because of this transformation. Paired forest versus grassland soils were sampled at four separate hillslope sites having a clear boundary between the two vegetation types. Factors of climate, topography, parent material, and time of soil formation were essentially identical in the forests and pastures of each site, but the time of soil under grassland vegetation may have varied. Each paired hillslope site included five core samples from the upper 7.6 cm of the mineral soil within each vegetation type and the A horizon thickness was recorded at each core hole. In addition, one complete soil profile was sampled in each vegetation type at each site, making a total of 20 core samples and 4 complete profiles from each respective vegetation type. Analyses included bulk density, pH, plant-available nutrients, organic matter, fulvic versus humic acids, total carbon and nitrogen, amorphous silica, and charcoal content. Results indicate pastured A horizons are about three times as thick as forested soils, contain more organic matter, and have lower bulk densities. These traits favor much greater infiltration and water holding capacities of the pastured soils, which we validated with saturated hydraulic conductivity tests. Melanization has been more pronounced in the managed pastures, which contain significantly more humic acids than forests. Significantly more charcoal (black carbon) is present in the pastured soils from long-term use of fire, and having implications for sequestration of carbon. Pastures register significantly higher soil magnetic susceptibility than forests, also related to past use of fire as a management tool. Pastures contain greater contents of amorphous silica due to more rapid phytolith production from grasses as opposed to trees. Anthropic manipulation of the biotic factor of pedogenesis has created new soil materials, processes, and functions. Our results indicate better soil quality in pastured soils, counter to stereotypical concepts of soil degradation due to grazing, and having important implications for soil sustainability

Termite infestation associated with type of soil in pulau pinang, malaysia (isoptera: rhinotermitidae).

PubMed

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-12-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil.

Termite Infestation Associated with Type of Soil in Pulau Pinang, Malaysia (Isoptera: Rhinotermitidae)

PubMed Central

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-01-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil. PMID:24575252

Removal of uranium from soil sample digests for ICP-OES analysis of trace metals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Foust, R.D. Jr.; Bidabad, M.

1996-10-01

An analytical procedure has been developed to quantitatively remove uranium from soil sample digests, permitting ICP-OES analysis of trace metals. The procedure involves digesting a soil sample with standard procedures (EPA SW-846, Method 3050), and passing the sample digestate through commercially available resin (U/TEVA{sm_bullet}Spec, Eichrom Industries, Inc.) containing diarryl amylphosphonate as the stationary phase. Quantitative removal of uranium was achieved with soil samples containing up to 60% uranium, and percent recoveries averaged better than 85% for 9 of the 10 metals evaluated (Ag, As, Cd. Cr, Cu, Ni, Pb, Se and Tl). The U/TEVA{sm_bullet}Spec column was regenerated by washing withmore » 200 mL of a 0.01 M oxalic acid/0.02 M nitric acid solution, permitting re-use of the column. GFAAS analysis of a sample spiked with 56.5% uranium, after treatment of the digestate with a U/TEVA{sm_bullet}Spec resin column, resulted in percent recoveries of 97% or better for all target metals.« less

Desert soil collection at the JPL soil science laboratory

NASA Technical Reports Server (NTRS)

Blank, G. B.; Cameron, R. E.

1969-01-01

Collection contains desert soils and other geologic materials collected from sites in the United States and foreign countries. Soils are useful for test purposes in research related to extraterrestrial life detection, sampling, harsh environmental studies, and determining suitable areas for training astronauts for lunar exploration.

HNU-HANBY PCP IMMUNOASSAY TEST KIT - INNOVATIVE TECHNOLOGY EVALUATION REPORT

EPA Science Inventory

The HNU-Hanby pentachlorophenol (PCP) test kit rapidly analyzes for PCP in soil samples. The test kit can only detect those PCP carriers that contain aromatic compounds. The test kit estimates PCP concentrations in soil samples indirectly by measuring petroleum hydrocarbon carrie...

Delignification and Enhanced Gas Release from Soil Containing Lignocellulose by Treatment with Bacterial Lignin Degraders.

PubMed

Rashid, Goran M M; Duran-Pena, Maria Jesus; Rahmanpour, Rahman; Sapsford, Devin; Bugg, Timothy D H

2017-04-10

The aim of the study was to isolate bacterial lignin-degrading bacteria from municipal solid waste soil, and to investigate whether they could be used to delignify lignocellulose-containing soil, and enhance methane release. A set of 20 bacterial lignin degraders, including 11 new isolates from municipal solid waste soil, were tested for delignification and phenol release in soil containing 1% pine lignocellulose. A group of 7 strains were then tested for enhancement of gas release from soil containing 1% lignocellulose in small-scale column tests. Using an aerobic pre-treatment, aerobic strains such as Pseudomonas putida showed enhanced gas release from the treated sample, but four bacterial isolates showed 5-10 fold enhancement in gas release in an in situ experiment under microanaerobic conditions: Agrobacterium sp., Lysinibacillus sphaericus, Comamonas testosteroni, and Enterobacter sp.. The results show that facultative anaerobic bacterial lignin degraders found in landfill soil can be used for in situ delignification and enhanced gas release in soil containing lignocellulose. The study demonstrates the feasibility of using an in situ bacterial treatment to enhance gas release and resource recovery from landfill soil containing lignocellulosic waste. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

4,4'-DDE and Endosulfan Levels in Agricultural Soils of the Çukurova Region, Mediterranean Turkey.

PubMed

Akça, Muhittin Onur; Hisatomi, Shihoko; Takemura, Manami; Harada, Naoki; Nonaka, Masanori; Sakakibara, Futa; Takagi, Kazuhiro; Turgay, Oğuz Can

2016-03-01

Mediterranean Turkey has long been at the forefront of Turkish agriculture and the use of organochlorinated pesticides (OCPs) in this area rose considerably between the 1940s and 1980s. This study aimed to determine OCP residue levels in agricultural soils collected from the Mersin and Adana Districts, Çukurova Basin in Mediterranean Turkey. Most soil samples were contaminated with one, or both, of two OCP metabolites; 4,4'-dichlorodiphenyldichloroethylene (4,4'-DDE) and endosulfan sulfate. 4,4'-DDE occurred in 27 of the 29 samples and ranged from 6 to 1090 µg kg(-1)-dry soil (ds)(-1), while six samples contained endosulfan sulfate ranging between 82 and 1226 µg kg(-1)-ds(-1). Generally, horticultural and corn-planted soils contained only 4,4'-DDE, whereas greenhouse cultivation appeared to accumulate both residues. This study indicated that 4,4'-DDE occurred above acceptable levels of risk in agricultural soils of Mersin District and further studies on the qualitative and quantitative assessment of OCPs in other agricultural regions with intensive pesticide use are necessary to fully understand the impact of OCPs on agricultural soil in Turkey.

40 CFR 265.112 - Closure plan; amendment of plan.

Code of Federal Regulations, 2010 CFR

2010-07-01

... residues and contaminated containment system components, equipment, structures, and soils during partial... contaminated soils, methods for sampling and testing surrounding soils, and criteria for determining the extent of decontamination necessary to satisfy the closure performance standard; and (5) A detailed...

40 CFR 264.112 - Closure plan; amendment of plan.

Code of Federal Regulations, 2010 CFR

2010-07-01

... residues and contaminated containment system components, equipment, structures, and soils during partial... contaminated soils, methods for sampling and testing surrounding soils, and criteria for determining the extent of decontamination required to satisfy the closure performance standard; and (5) A detailed...

View of container of green-colored lunar soil in Lunar Receiving Laboratory

NASA Image and Video Library

1971-08-13

S71-43052 (August 1971) --- A close-up view of a container full of green-colored lunar soil in the Non-Sterile Nitrogen Processing Line (NNPL) in the Lunar Receiving Laboratory (LRL) at the Manned Spacecraft Center (MSC). This sample, broken down into six separate samples after this photo was made, was made up of comprehensive fines from near Spur Crater on the Apennine Front. The numbers assigned to the sample include numbers 15300 through 15305. Astronauts David R. Scott and James B. Irwin took the sample during their second extravehicular activity (EVA) at a ground elapsed time (GET) of 146:05 to 146:06.

The Uppermost Surface of the Moon

NASA Technical Reports Server (NTRS)

Noble, Sarah K.

2009-01-01

The Ap16 Clam shell Sampling Devices (CSSDs) were designed to sample the uppermost surface of lunar soil. The two devices used beta cloth (69003) and velvet (69004) to collect soil from the top 100 and 500 micrometers of the soil, respectively. Due to the difficulty of the sampling method, little material was collected and as a result little research has been done on these samples. Initial studies attempted to look at the material which had fallen off of the fabrics and was subsequently collected from inside the sample containers. However, this material was highly fractionated and did not provide an adequate picture of the uppermost surface. Recently, samples were obtained directly from the beta cloth using carbon tape. While still fractionated, these samples provide a unique glimpse into the undisturbed soil exposed at the lunar surface.

Biogenic NO emission from a spruce forest soil in the Fichtelgebirge (Germany) under the influence of different understorey vegetation cover

NASA Astrophysics Data System (ADS)

Bargsten, A.; Andreae, M. O.; Meixner, F. X.

2009-04-01

Within the framework of the EGER project (ExchanGE processes in mountainous Regions) soil samples have been taken from the spruce forest site "Weidenbrunnen" (Fichtelgebirge, Germany) in September 2008 to determine the NO exchange in the laboratory and for a series of soil analyses. The soil was sampled below different understorey vegetation covers: young Norway spruce, moss/litter, blueberries and grass. We investigated the net NO release rate from corresponding organic layers as well as from the A horizon of respective soils. Additionally we measured pH, C/N ratio, contents of ammonium, nitrate, and organic C, bulk density, the thickness of the organic layer and the quality of the organic matter. Net NO release rates (as well as the NO production and NO consumption rates) from the soil samples were determined by a fully automated laboratory incubation & fumigation system. Purified dry air passed five dynamic incubation chambers, four containing water saturated soil samples and one reference chamber. By this procedure, the soil samples dried out slowly (within 2-6 days), covering the full range of soil moisture (0-300% gravimetric soil moisture). To quantify NO production and NO consumption rates separately, soil samples were fumigated with zero-air (approx. 0 ppb NO) and air of 133 ppb NO. The chambers were placed in a thermostatted cabinet for incubation at 10 an 20˚ C. NO and H2O concentrations at the outlet of the five dynamic chambers were measured sequentially by chemiluminescence and IR-absorption based analyzers, switching corresponding valves every two minutes. Net NO release rates were determined from the NO concentration difference between soil containing and reference chambers. Corresponding measurements of H2O mixing ratio yielded the evaporation loss of the soil samples, which (referenced to the gravimetric soil water content before and after the incubation experiment) provided the individual soil moisture contents of each soil samples during the incubation experiment. Our contribution focus net NO release rates, NO production and NO consumption rates of spruce forest soils sampled under different understorey vegetation covers. Generally, organic layers show significant higher NO production and NO consumption rates than the soils from the corresponding A horizons. Soils under the understorey vegetation cover "moos/litter" revealed the lowest NO production and NO consumption rates. Net NO release rates, NO production and NO consumption rates of soil samples obtained below the four different under- storey vegetation covers will be discussed in terms of pH, C/N ratio, contents of ammonium, nitrate, and organic C, bulk density, thickness of organic layer, as well as quality of the organic matter.

BOREAS TE-2 NSA Soil Lab Data

NASA Technical Reports Server (NTRS)

Veldhuis, Hugo; Hall, Forrest G. (Editor); Knapp, David E. (Editor)

2000-01-01

This data set contains the major soil properties of soil samples collected in 1994 at the tower flux sites in the Northern Study Area (NSA). The soil samples were collected by Hugo Veldhuis and his staff from the University of Manitoba. The mineral soil samples were largely analyzed by Barry Goetz, under the supervision of Dr. Harold Rostad at the University of Saskatchewan. The organic soil samples were largely analyzed by Peter Haluschak, under the supervision of Hugo Veldhuis at the Centre for Land and Biological Resources Research in Winnipeg, Manitoba. During the course of field investigation and mapping, selected surface and subsurface soil samples were collected for laboratory analysis. These samples were used as benchmark references for specific soil attributes in general soil characterization. Detailed soil sampling, description, and laboratory analysis were performed on selected modal soils to provide examples of common soil physical and chemical characteristics in the study area. The soil properties that were determined include soil horizon; dry soil color; pH; bulk density; total, organic, and inorganic carbon; electric conductivity; cation exchange capacity; exchangeable sodium, potassium, calcium, magnesium, and hydrogen; water content at 0.01, 0.033, and 1.5 MPascals; nitrogen; phosphorus: particle size distribution; texture; pH of the mineral soil and of the organic soil; extractable acid; and sulfur. These data are stored in ASCII text files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Laboratory Evaluation of Effects of Soil Properties on Termiticide Performance against Formosan Subterranean Termites (Isoptera: Rhinotermitidae)

USDA-ARS?s Scientific Manuscript database

Fourteen Mississippi soils representing a range of soil properties were treated with bifenthrin, chlorfenapyr, or fipronil at two rates of each termiticide. Treated soils were placed in well-drained containers, then watered. Two weeks post-treatment, core samples were removed, divided into three 5-c...

Chemical characterization of outdoor and subway fine (PM(2.5-1.0)) and coarse (PM(10-2.5)) particulate matter in Seoul (Korea) by computer-controlled scanning electron microscopy (CCSEM).

PubMed

Byeon, Sang-Hoon; Willis, Robert; Peters, Thomas M

2015-02-13

Outdoor and indoor (subway) samples were collected by passive sampling in urban Seoul (Korea) and analyzed with computer-controlled scanning electron microscopy coupled with energy dispersive x-ray spectroscopy (CCSEM-EDX). Soil/road dust particles accounted for 42%-60% (by weight) of fine particulate matter larger than 1 µm (PM(2.5-1.0)) in outdoor samples and 18% of PM2.5-1.0 in subway samples. Iron-containing particles accounted for only 3%-6% in outdoor samples but 69% in subway samples. Qualitatively similar results were found for coarse particulate matter (PM(10-2.5)) with soil/road dust particles dominating outdoor samples (66%-83%) and iron-containing particles contributing most to subway PM(10-2.5) (44%). As expected, soil/road dust particles comprised a greater mass fraction of PM(10-2.5) than PM(2.5-1.0). Also as expected, the mass fraction of iron-containing particles was substantially less in PM(10-2.5) than in PM(2.5-1.0). Results of this study are consistent with known emission sources in the area and with previous studies, which showed high concentrations of iron-containing particles in the subway compared to outdoor sites. Thus, passive sampling with CCSEM-EDX offers an inexpensive means to assess PM(2.5-1.0) and PM(10-2.5) simultaneously and by composition at multiple locations.

Azole-resistant Aspergillus fumigatus harboring TR34/L98H, TR46/Y121F/T289A and TR53 mutations related to flower fields in Colombia

NASA Astrophysics Data System (ADS)

Alvarez-Moreno, Carlos; Lavergne, Rose-Anne; Hagen, Ferry; Morio, Florent; Meis, Jacques F.; Le Pape, Patrice

2017-03-01

Resistance to triazoles in Aspergillus fumigatus has been reported in azole-naive patients in Europe, Asia, Australia and North America. This resistance has been linked to fungicide-driven mutations in the cyp51A gene and its promoter region. We investigated the presence of environmental azole-resistant A. fumigatus strains related to the use of azole fungicides in Colombia. Soil samples were collected from flower beds, flower fields and public gardens from the outskirts, suburbs and city centre of Bogotá. Out of the 86 soil samples taken, 17 (19.8%) grew A. fumigatus of whom eight (9.3%) contained 40 strains able to grow on azole-containing itraconazole and/or voriconazole supplemented media. All but one triazole-resistant strains were isolated from soil samples collected from flower fields and flower beds (39/40). Importantly, the majority had the TR46/Y121F/T289A, TR34/L98H, and TR53 molecular resistance mechanisms and one azole resistant strain had a wild-type cyp51A gene. Soil samples from flower fields and beds contained 4 azole fungicides (penconazole, difenoconazole, tetraconazole and tebuconazole) above the limit of detection. Our findings underline the need for extensive investigations to determine azole-resistant A. fumigatus prevalence in both clinical and environmental samples in other regions of Latin America.

Azole-resistant Aspergillus fumigatus harboring TR34/L98H, TR46/Y121F/T289A and TR53 mutations related to flower fields in Colombia.

PubMed

Alvarez-Moreno, Carlos; Lavergne, Rose-Anne; Hagen, Ferry; Morio, Florent; Meis, Jacques F; Le Pape, Patrice

2017-03-30

Resistance to triazoles in Aspergillus fumigatus has been reported in azole-naive patients in Europe, Asia, Australia and North America. This resistance has been linked to fungicide-driven mutations in the cyp51A gene and its promoter region. We investigated the presence of environmental azole-resistant A. fumigatus strains related to the use of azole fungicides in Colombia. Soil samples were collected from flower beds, flower fields and public gardens from the outskirts, suburbs and city centre of Bogotá. Out of the 86 soil samples taken, 17 (19.8%) grew A. fumigatus of whom eight (9.3%) contained 40 strains able to grow on azole-containing itraconazole and/or voriconazole supplemented media. All but one triazole-resistant strains were isolated from soil samples collected from flower fields and flower beds (39/40). Importantly, the majority had the TR 46 /Y121F/T289A, TR 34 /L98H, and TR 53 molecular resistance mechanisms and one azole resistant strain had a wild-type cyp51A gene. Soil samples from flower fields and beds contained 4 azole fungicides (penconazole, difenoconazole, tetraconazole and tebuconazole) above the limit of detection. Our findings underline the need for extensive investigations to determine azole-resistant A. fumigatus prevalence in both clinical and environmental samples in other regions of Latin America.

N-15 NMR spectra of naturally abundant nitrogen in soil and aquatic natural organic matter samples of the International Humic Substances Society

USGS Publications Warehouse

Thorn, K.A.; Cox, L.G.

2009-01-01

The naturally abundant nitrogen in soil and aquatic NOM samples from the International Humic Substances Society has been characterized by solid state CP/MAS 15N NMR. Soil samples include humic and fulvic acids from the Elliot soil, Minnesota Waskish peat and Florida Pahokee peat, as well as the Summit Hill soil humic acid and the Leonardite humic acid. Aquatic samples include Suwannee River humic, fulvic and reverse osmosis isolates, Nordic humic and fulvic acids and Pony Lake fulvic acid. Additionally, Nordic and Suwannee River XAD-4 acids and Suwannee River hydrophobic neutral fractions were analyzed. Similar to literature reports, amide/aminoquinone nitrogens comprised the major peaks in the solid state spectra of the soil humic and fulvic acids, along with heterocyclic and amino sugar/terminal amino acid nitrogens. Spectra of aquatic samples, including the XAD-4 acids, contain resolved heterocyclic nitrogen peaks in addition to the amide nitrogens. The spectrum of the nitrogen enriched, microbially derived Pony Lake, Antarctica fulvic acid, appeared to contain resonances in the region of pyrazine, imine and/or pyridine nitrogens, which have not been observed previously in soil or aquatic humic substances by 15N NMR. Liquid state 15N NMR experiments were also recorded on the Elliot soil humic acid and Pony Lake fulvic acid, both to examine the feasibility of the techniques, and to determine whether improvements in resolution over the solid state could be realized. For both samples, polarization transfer (DEPT) and indirect detection (1H-15N gHSQC) spectra revealed greater resolution among nitrogens directly bonded to protons. The amide/aminoquinone nitrogens could also be observed by direct detection experiments.

N-15 NMR spectra of naturally abundant nitrogen in soil and aquatic natural organic matter samples of the International Humic Substances Society

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thorn, Kevin A.; Cox, Larry G.

2009-02-28

The naturally abundant nitrogen in soil and aquatic NOM samples from the International Humic Substances Society has been characterized by solid state CP/MAS ¹⁵N NMR. Soil samples include humic and fulvic acids from the Elliot soil, Minnesota Waskish peat and Florida Pahokee peat, as well as the Summit Hill soil humic acid and the Leonardite humic acid. Aquatic samples include Suwannee River humic, fulvic and reverse osmosis isolates, Nordic humic and fulvic acids and Pony Lake fulvic acid. Additionally, Nordic and Suwannee River XAD-4 acids and Suwannee River hydrophobic neutral fractions were analyzed. Similar to literature reports, amide/aminoquinone nitrogens comprisedmore » the major peaks in the solid state spectra of the soil humic and fulvic acids, along with heterocyclic and amino sugar/terminal amino acid nitrogens. Spectra of aquatic samples, including the XAD-4 acids, contain resolved heterocyclic nitrogen peaks in addition to the amide nitrogens. The spectrum of the nitrogen enriched, microbially derived Pony Lake, Antarctica fulvic acid, appeared to contain resonances in the region of pyrazine, imine and/or pyridine nitrogens, which have not been observed previously in soil or aquatic humic substances by ¹⁵N NMR. Liquid state ¹⁵N NMR experiments were also recorded on the Elliot soil humic acid and Pony Lake fulvic acid, both to examine the feasibility of the techniques, and to determine whether improvements in resolution over the solid state could be realized. For both samples, polarization transfer (DEPT) and indirect detection (¹H–¹⁵N gHSQC) spectra revealed greater resolution among nitrogens directly bonded to protons. The amide/aminoquinone nitrogens could also be observed by direct detection experiments.« less

Diversity of Bacillus thuringiensis strains in the maize and bean phylloplane and their respective soils in Colombia.

PubMed

Jara, S; Maduell, P; Orduz, S

2006-07-01

To evaluate the distribution of Bacillus thuringiensis strains from maize and bean phylloplane and their respective soils. B. thuringiensis was isolated from the phylloplane and soil of maize and bean from three municipalities in Antioquia, Colombia. Ninety six samples of phylloplane and 24 of soil were analyzed. A total of 214 isolates were obtained from 96 phylloplane samples while 59 isolates were recovered from 24 soil samples. Sixty five per cent and 12% of the phylloplane and soil isolates, respectively, showed activity against Spodoptera frugiperda. These isolates contained delta-endotoxin proteins of 57 and 130 kDa. The most toxic isolates against S. frugiperda had the genotype cry1Aa, cry1Ac, cry1B, and cry1D. In contrast, 27% of the phylloplane isolates and 88% of the soil isolates were active against Culex quinquefasciatus and had protein profiles similar to B. thuringiensis serovar. medellin and B. thuringiensis serovar. israelensis. The most active isolates contain cry4 and cry11 genes. The predominant population of B. thuringiensis on the phylloplane harbored the cry1 gene and was active against S. frugiperda, whereas in soil, isolates harboring cry11 gene and active against C. quinquefasciatus were the majority. The predominance of specific B. thuringiensis populations, both on the leaves and in the soil, suggests the presence of selection in B. thuringiensis populations on the studied environment.

Brassicaceae tissues as inhibitors of nitrification in soil.

PubMed

Brown, Paul D; Morra, Matthew J

2009-09-09

Brassicaceae crops often produce an unexplained increase in plant-available soil N possibly related to bioactive compounds produced from glucosinolates present in the tissues. Our objective was to determine if glucosinolate-containing tissues inhibit nitrification, thereby potentially explaining this observation. Ammonium, NO(2)(-), and NO(3)(-) N were measured in soils amended with Brassicaceae ( Isatis tinctoria L., Brassica napus L., Brassica juncea L., and Sinapis alba L.) tissues containing different glucosinolate types and concentrations or Kentucky bluegrass ( Poa pratensis L.) residues with equivalent C/N ratios as the Brassicaceae samples. There was greater accumulation of NH(4)(+) N in soils amended with tissues containing high glucosinolate concentrations as compared to soils amended with tissues containing no or low glucosinolate concentrations. Nitrite N was detected only in soils amended with Brassicaceae tissues having the highest glucosinolate concentrations. The positive correlation of both NH(4)(+) and NO(2)(-) N accumulation with the glucosinolate concentration indicates the participation of glucosinolate hydrolysis products in nitrification inhibition.

Solving mercury (Hg) speciation in soil samples by synchrotron X-ray microspectroscopic techniques.

PubMed

Terzano, Roberto; Santoro, Anna; Spagnuolo, Matteo; Vekemans, Bart; Medici, Luca; Janssens, Koen; Göttlicher, Jörg; Denecke, Melissa A; Mangold, Stefan; Ruggiero, Pacifico

2010-08-01

Direct mercury (Hg) speciation was assessed for soil samples with a Hg concentration ranging from 7 up to 240 mg kg(-1). Hg chemical forms were identified and quantified by sequential extractions and bulk- and micro-analytical techniques exploiting synchrotron generated X-rays. In particular, microspectroscopic techniques such as mu-XRF, mu-XRD and mu-XANES were necessary to solve bulk Hg speciation, in both soil fractions <2 mm and <2 microm. The main Hg-species found in the soil samples were metacinnabar (beta-HgS), cinnabar (alpha-HgS), corderoite (Hg(3)S(2)Cl(2)), and an amorphous phase containing Hg bound to chlorine and sulfur. The amount of metacinnabar and amorphous phases increased in the fraction <2 microm. No interaction among Hg-species and soil components was observed. All the observed Hg-species originated from the slow weathering of an inert Hg-containing waste material (K106, U.S. EPA) dumped in the area several years ago, which is changing into a relatively more dangerous source of pollution. Copyright 2010 Elsevier Ltd. All rights reserved.

Necessity of purification during bacterial DNA extraction with environmental soils

PubMed Central

Choi, Jung-Hyun

2017-01-01

Complexity and heterogeneity of soil samples have often implied the inclusion of purification steps in conventional DNA extraction for polymerase chain reaction (PCR) assays. Unfortunately the purification steps are also time and labor intensive. Therefore the necessity of DNA purification was re-visited and investigated for a variety of environmental soil samples that contained various amounts of PCR inhibitors. Bead beating and centrifugation was used as the baseline (without purification) method for DNA extraction. Its performance was compared with that of conventional DNA extraction kit (with purification). The necessity criteria for DNA purification were established with environmental soil samples. Using lysis conditions at 3000 rpm for 3 minutes with 0.1 mm glass beads, centrifugation time of 10 minutes and 1:10 dilution ratio, the baseline method outperformed conventional DNA extraction on cell seeded sand samples. Further investigation with PCR inhibitors (i.e., humic acids, clay, and magnesium [Mg]) showed that sand samples containing less than 10 μg/g humic acids and 70% clay may not require purifications. Interestingly, the inhibition pattern of Mg ion was different from other inhibitors due to the complexation interaction of Mg ion with DNA fragments. It was concluded that DNA extraction method without purification is suitable for soil samples that have less than 10 μg/g of humic acids, less than 70% clay content and less than 0.01% Mg ion content. PMID:28793754

First Report of the new root-lesion nematode Pratylenchus sp. on soybean in North Dakota

USDA-ARS?s Scientific Manuscript database

Root-lesion nematodes (Pratylenchus spp.) are important nematode pests on soybean. In 2015, two soil samples were collected from a soybean field in Richland County, ND. Nematodes were extracted from soil using a sugar centrifugal flotation method, revealing these two samples contained 125 and 350 ro...

Re-Os Isotope Systematics in Lunar Soils and Breccias

NASA Technical Reports Server (NTRS)

Chen, J. H.; Papanastassiou, D. A; Wasserburg, G. J.

2002-01-01

Lunar soil and breccia samples show a narrow range in 187Os/188Os, in the range for H-chondrites and unfractionated irons. All samples show enrichments in 187Re/188Os, possibly reflecting loss of Os, associated with the terminal lunar cataclysm. Additional information is contained in the original extended abstract.

Sampling the Soils around a Residence Containing Lead-Based Paints: An X-Ray Fluorescence Experiment

ERIC Educational Resources Information Center

Bachofer, Steven J.

2008-01-01

Sampling experiments utilizing field portable instruments are instructional since students collect data following regulatory protocols, evaluate it, and begin to recognize their civic responsibilities upon collecting useful data. A lead-in-soil experiment educated students on a prevalent exposure pathway. The experimental site was a pre-1950…

First report of a new, unnamed lesion nematode Pratylenchus sp. infecting soybean in North Dakota

USDA-ARS?s Scientific Manuscript database

Lesion nematodes (Pratylenchus spp.) are important pests on soybean. In 2015 and 2016, nematodes in 11 soil samples from a soybean field in Richland County, ND were extracted by sugar centrifugal flotation method (Jenkins 1964). Ten samples contained lesion nematodes from 150 to 875/kg of soil. One ...

Isotope fractionation of sandy-soil water during evaporation - an experimental study.

PubMed

Rao, Wen-Bo; Han, Liang-Feng; Tan, Hong-Bing; Wang, Shuai

2017-06-01

Soil samples containing water with known stable isotopic compositions were prepared. The soil water was recovered by using vacuum/heat distillation. The experiments were held under different conditions to control rates of water evaporation and water recovery. Recoveries, δ 18 O and δ 2 H values of the soil water were determined. Analyses of the data using a Rayleigh distillation model indicate that under the experimental conditions only loosely bound water is extractable in cases where the recovery is smaller than 100 %. Due to isotopic exchange between vapour and remaining water in the micro channels or capillaries of the soil matrix, isotopic fractionation may take place under near-equilibrium conditions. This causes the observed relationship between δ 2 H and δ 18 O of the extracted water samples to have a slope close to 8. The results of this study may indicate that, in arid zones when soil that initially contains water dries out, the slope of the relationship between δ 2 H and δ 18 O values should be close to 8. Thus, a smaller slope, as observed by some groundwater and soil water samples in arid zones, may be caused by evaporation of water before the water has entered the unsaturated zone.

Cold Climate Related Structural Sinks Accommodate Unusual Soil Constituents, Pinelands National Reserve, New Jersey, USA

NASA Astrophysics Data System (ADS)

Demitroff, M.; Lecompte, M. A.; Rock, B. N.

2009-12-01

Firestone and others proposed an extraterrestrial (ET) impact upon the Laurentide Ice Sheet 12,900 years ago led to abrupt climate change and left behind a distinct suite of microscopic soil markers. If so, then soil memory of such an extreme event should be apparent across a wide swath of ice-marginal North America. New Jersey’s Pine Barrens has a remarkably well-preserved record of Late Pleistocene soil structures that provide snapshots of rigorous climatic episodes, the youngest of which are potential reservoirs for ET markers. Cryogenic macrostructures are fissures related to episodic temperature and moisture extremes providing excellent chronostratigraphic control - unlike soil horizons that are often affected by denudation and pedogenic modification. Three distinct ground structures were sampled for evidence of infill-related ET markers: 1) two ground (soil) wedges (early Holocene?); 2) a younger sand-wedge cast (late-Wisconsinan?); and 3) an older sand-wedge cast (early-Wisconsinan?). Attendant host sediment and capping colluvium coversand samples were also collected for evidence of ET markers to detect potential source sinks. Our pedocomplex contained elements ranging from Miocene Cohansey Formation basement sands to early-Holocene fluvioeolian coversands. Scanning electron microscopy (SEM), transmission electron microscopy (TEM), and energy dispersive x-ray analysis (EDX) are being used to characterize soil constituents of interest. Carbon and luminescence dating are underway to provide geomorphic events timing associated with specific soil constituent trap formation. Fly ash collected from a coal-fired electrical plant 13-km distant was also examined. Several soil constituents atypical to the local petrology as currently understood were found. Infill from two ground (soil) wedges contained ~100,000 to ~500,000 magnetic spherules/kg, 25 to 50 translucent amber-colored spherules/kg, 250 to 500 carbon spherules/kg, charcoal, and pieces of glass-like carbon. Some of these carbon spherules (~1 in 20) contained n-diamond allotrope nanodiamonds, and averaged between 2 and 60 nanometers across. Magnetic spherules were found bound within a caramel colored brittle matrix and averaged about 10 to 30 microns across, and on occasion formed raspberry-like clusters. The fly ash contained no detectable diamonds, although it did contain a few magnetic spherules. Testing of other samples is in progress.

Summary of inorganic compositional data for groundwater, soil-water, and surface-water samples collected at the Headgate Draw subsurface drip irrigation site, Johnson County, Wyoming

USGS Publications Warehouse

Geboy, Nicholas J.; Engle, Mark A.; Schroeder, Karl T.; Zupancic, John W.

2011-01-01

As part of a 5-year project on the impact of subsurface drip irrigation (SDI) application of coalbed-methane (CBM) produced waters, water samples were collected from the Headgate Draw SDI site in the Powder River Basin, Wyoming, USA. This research is part of a larger study to understand short- and long-term impacts on both soil and water quality from the beneficial use of CBM waters to grow forage crops through use of SDI. This document provides a summary of the context, sampling methodology, and quality assurance and quality control documentation of samples collected prior to and over the first year of SDI operation at the site (May 2008-October 2009). This report contains an associated database containing inorganic compositional data, water-quality criteria parameters, and calculated geochemical parameters for samples of groundwater, soil water, surface water, treated CBM waters, and as-received CBM waters collected at the Headgate Draw SDI site.

Experimental investigation of infiltration in soil with occurrence of preferential flow and air trapping

NASA Astrophysics Data System (ADS)

Snehota, Michal; Jelinkova, Vladimira; Sacha, Jan; Cislerova, Milena

2015-04-01

Recently, a number of infiltration experiments have not proved the validity of standard Richards' theory of the flow in soils with wide pore size distribution. Water flow in such soils under near-saturated conditions often exhibits preferential flow and temporal instability of the saturated hydraulic conductivity. An intact sample of coarse sandy loam from Cambisol series containing naturally developed vertically connected macropore was investigated during recurrent ponding infiltration (RPI) experiments conducted during period of 30 hours. RPI experiment consisted of two ponded infiltration runs, each followed by free gravitational draining of the sample. Three-dimensional neutron tomography (NT) image of the dry sample was acquired before the infiltration begun. The dynamics of the wetting front advancement was investigated by a sequence of neutron radiography (NR) images. Analysis of NR showed that water front moved preferentially through the macropore at the approximate speed of 2 mm/sec, which was significantly faster pace than the 0.3 mm/sec wetting advancement in the surrounding soil matrix. After the water started to flow out of the sample, changes in the local water content distribution were evaluated quantitatively by subtracting the NT image of the dry sample from subsequent tomography images. As a next stage, the experiment was repeated on a composed sample packed of ceramic and coarse sand. Series of infiltration runs was conducted in the sample with different initial water contents. The neutron tomography data quantitatively showed that both in natural soil sample containing the macropore and in the composed sample air was gradually transported from the region of fine soil matrix to the macropores or to the coarser material. The accumulation of the air bubbles in the large pores affected the hydraulic conductivity of the sample reducing it up to 50% of the initial value. This supports the hypothesis on strong influence of entrapped air amount and spatial distribution on infiltration into heterogeneous soils. The research was supported by the Czech Science Foundation Project No. 14-03691S.

Determination of water-soluble ions in soils from the dry valleys of Antarctica

NASA Technical Reports Server (NTRS)

Bustin, R.

1981-01-01

The soil chemistry of the dry valleys of Antarctica was studied. These valleys furnish a terrestrial analog for the surface of Mars. The abundance of the water-soluble ions magnesium, calcium, potassium, sodium chloride, and nitrate in soil samples was determined. All samples examined contained water-soluble salts reflecting the aridity of the area. Movement of salts to low-lying areas was verified. Upward ionic migration was evident in all core samples. Of all cations observed, sodium showed the greatest degree of migration.

Soil sampling and analytical strategies for mapping fallout in nuclear emergencies based on the Fukushima Dai-ichi Nuclear Power Plant accident.

PubMed

Onda, Yuichi; Kato, Hiroaki; Hoshi, Masaharu; Takahashi, Yoshio; Nguyen, Minh-Long

2015-01-01

The Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident resulted in extensive radioactive contamination of the environment via deposited radionuclides such as radiocesium and (131)I. Evaluating the extent and level of environmental contamination is critical to protecting citizens in affected areas and to planning decontamination efforts. However, a standardized soil sampling protocol is needed in such emergencies to facilitate the collection of large, tractable samples for measuring gamma-emitting radionuclides. In this study, we developed an emergency soil sampling protocol based on preliminary sampling from the FDNPP accident-affected area. We also present the results of a preliminary experiment aimed to evaluate the influence of various procedures (e.g., mixing, number of samples) on measured radioactivity. Results show that sample mixing strongly affects measured radioactivity in soil samples. Furthermore, for homogenization, shaking the plastic sample container at least 150 times or disaggregating soil by hand-rolling in a disposable plastic bag is required. Finally, we determined that five soil samples within a 3 m × 3-m area are the minimum number required for reducing measurement uncertainty in the emergency soil sampling protocol proposed here. Copyright © 2014 Elsevier Ltd. All rights reserved.

Phenanthrene sorption with heterogeneous organic matter in a landfill aquifer material

USGS Publications Warehouse

Karapanagioti, H.K.; Sabatini, D.A.; Kleineidam, S.; Grathwohl, P.; Ligouis, B.

1999-01-01

Phenanthrene was used as a model chemical to study the sorption properties of Canadian River Alluvium aquifer material. Both equilibrium and kinetic sorption processes were evaluated through batch studies. The bulk sample was divided into subsamples with varying properties such as particle size, organic content, equilibration time, etc. in order to determine the effect of these properties on resulting sorption parameters. The data have been interpreted and the effect of experimental variables was quantified using the Freundlich isotherm model and a numerical solution of Fick's 2nd law in porous media. Microscopic organic matter characterization proved to be a valuable tool for explaining the results. Different organic matter properties and sorption mechanisms were observed for each soil subsample. Samples containing coal particles presented high Koc values. Samples with organic matter dominated by organic coatings on quartz grains presented low Koc values and contained a high percentage of fast sorption sites. The numerical solution of Fick's 2ndlaw requires the addition of two terms (fast and slow) in order to fit the kinetics of these heterogeneous samples properly. These results thus demonstrate the need for soil organic matter characterization in order to predict and explain the sorption properties of a soil sample containing heterogeneous organic matter and also the difficulty and complexity of modeling sorption in such samples.

Soil forensics: How far can soil clay analysis distinguish between soil vestiges?

PubMed

Corrêa, R S; Melo, V F; Abreu, G G F; Sousa, M H; Chaker, J A; Gomes, J A

2018-03-01

Soil traces are useful as forensic evidences because they frequently adhere to individuals and objects associated with crimes and can place or discard a suspect at/from a crime scene. Soil is a mixture of organic and inorganic components and among them soil clay contains signatures that make it reliable as forensic evidence. In this study, we hypothesized that soils can be forensically distinguished through the analysis of their clay fraction alone, and that samples of the same soil type can be consistently distinguished according to the distance they were collected from each other. To test these hypotheses 16 Oxisol samples were collected at distances of between 2m and 1.000m, and 16 Inceptisol samples were collected at distances of between 2m and 300m from each other. Clay fractions were extracted from soil samples and analyzed for hyperspectral color reflectance (HSI), X-ray diffraction crystallographic (XRD), and for contents of iron oxides, kaolinite and gibbsite. The dataset was submitted to multivariate analysis and results were from 65% to 100% effective to distinguish between samples from the two soil types. Both soil types could be consistently distinguished for forensic purposes according to the distance that samples were collected from each other: 1000m for Oxisol and 10m for Inceptisol. Clay color and XRD analysis were the most effective techniques to distinguish clay samples, and Inceptisol samples were more easily distinguished than Oxisol samples. Soil forensics seems a promising field for soil scientists as soil clay can be useful as forensic evidence by using routine analytical techniques from soil science. Copyright © 2017 The Chartered Society of Forensic Sciences. Published by Elsevier B.V. All rights reserved.

Chemical Characterization of Outdoor and Subway Fine (PM2.5–1.0) and Coarse (PM10–2.5) Particulate Matter in Seoul (Korea) by Computer-Controlled Scanning Electron Microscopy (CCSEM)

PubMed Central

Byeon, Sang-Hoon; Willis, Robert; Peters, Thomas M.

2015-01-01

Outdoor and indoor (subway) samples were collected by passive sampling in urban Seoul (Korea) and analyzed with computer-controlled scanning electron microscopy coupled with energy dispersive x-ray spectroscopy (CCSEM-EDX). Soil/road dust particles accounted for 42%–60% (by weight) of fine particulate matter larger than 1 µm (PM2.5–1.0) in outdoor samples and 18% of PM2.5–1.0 in subway samples. Iron-containing particles accounted for only 3%–6% in outdoor samples but 69% in subway samples. Qualitatively similar results were found for coarse particulate matter (PM10–2.5) with soil/road dust particles dominating outdoor samples (66%–83%) and iron-containing particles contributing most to subway PM10–2.5 (44%). As expected, soil/road dust particles comprised a greater mass fraction of PM10–2.5 than PM2.5–1.0. Also as expected, the mass fraction of iron-containing particles was substantially less in PM10–2.5 than in PM2.5–1.0. Results of this study are consistent with known emission sources in the area and with previous studies, which showed high concentrations of iron-containing particles in the subway compared to outdoor sites. Thus, passive sampling with CCSEM-EDX offers an inexpensive means to assess PM2.5–1.0 and PM10-2.5 simultaneously and by composition at multiple locations. PMID:25689348

Progress in the Use of Rapid Molecular Techniques to Detect Life Forms in Soil: Implications for Interplanetary Astrobiology Missions

NASA Technical Reports Server (NTRS)

Warmflash, D.; Larios-Sanz, M.; Fox, G. E.; McKay, D. S.

2002-01-01

To demonstrate the feasibility of two promising technologies, we have applied Enzyme-Linked Immunosorbent Assay (ELISA) as well as probes that target the 16S rRNA molecule to search for life in terrestrial soil samples, known to contain numerous life forms. Additional information is contained in the original extended abstract.

Quantitative Estimation of the Viability of Toxoplasma gondii Oocysts in Soil

PubMed Central

Villena, Isabelle; Dardé, Marie-Laure; Aubert, Dominique; Geers, Régine; Dupuis, Emilie; Marnef, Francine; Poulle, Marie-Lazarine; Gotteland, Cécile; Dumètre, Aurélien

2012-01-01

Toxoplasma gondii oocysts spread in the environment are an important source of toxoplasmosis for humans and animal species. Although the life expectancy of oocysts has been studied through the infectivity of inoculated soil samples, the survival dynamics of oocysts in the environment are poorly documented. The aim of this study was to quantify oocyst viability in soil over time under two rain conditions. Oocysts were placed in 54 sentinel chambers containing soil and 18 sealed water tubes, all settled in two containers filled with soil. Containers were watered to simulate rain levels of arid and wet climates and kept at stable temperature for 21.5 months. At nine sampling dates during this period, we sampled six chambers and two water tubes. Three methods were used to measure oocyst viability: microscopic counting, quantitative PCR (qPCR), and mouse inoculation. In parallel, oocysts were kept refrigerated during the same period to analyze their detectability over time. Microscopic counting, qPCR, and mouse inoculation all showed decreasing values over time and highly significant differences between the decreases under dry and damp conditions. The proportion of oocysts surviving after 100 days was estimated to be 7.4% (95% confidence interval [95% CI] = 5.1, 10.8) under dry conditions and 43.7% (5% CI = 35.6, 53.5) under damp conditions. The detectability of oocysts by qPCR over time decreased by 0.5 cycle threshold per 100 days. Finally, a strong correlation between qPCR results and the dose infecting 50% of mice was found; thus, qPCR results may be used as an estimate of the infectivity of soil samples. PMID:22582074

Application of Bioassays for the Ecotoxicity Assessment of Contaminated Soils

NASA Astrophysics Data System (ADS)

Fernández, María D.; Babín, Mar; Tarazona, José V.

The use of bioassays for soil characterization is receiving significant attention as a complementary tool to chemical analysis. Bioassays consist of direct toxicity assays of environmental samples that are transferred to the laboratory and analyzed for toxicity against selected organisms. Such soil samples contain the combination of the different pollutants present in situ and enable factors such as the bioavailability of contaminants or the interactions (synergic and antagonic) between them to be simultaneously studied.

Population exposure to trace elements in the Kilembe copper mine area, Western Uganda: A pilot study.

PubMed

Mwesigye, Abraham R; Young, Scott D; Bailey, Elizabeth H; Tumwebaze, Susan B

2016-12-15

The mining and processing of copper in Kilembe, Western Uganda, from 1956 to 1982 left over 15 Mt. of tailings containing cupriferous and cobaltiferous pyrite dumped within a mountain river valley. This pilot study was conducted to assess the nature and extent of risk to local populations from metal contamination arising from those mining activities. We determined trace element concentrations in mine tailings, soils, locally cultivated foods, house dust, drinking water and human biomarkers (toenails) using ICP-MS analysis of acid digested samples. The results showed that tailings, containing higher concentrations of Co, Cu, Ni and As compared with world average crust values had eroded and contaminated local soils. Pollution load indices revealed that 51% of agricultural soils sampled were contaminated with trace elements. Local water supplies were contaminated, with Co concentrations that exceeded Wisconsin (US) thresholds in 25% of domestic water supplies and 40% of Nyamwamba river water samples. Zinc exceeded WHO/FAO thresholds of 99.4mgkg -1 in 36% of Amaranthus vegetable samples, Cu exceeded EC thresholds of 20mgkg -1 in 19% of Amaranthus while Pb exceeded WHO thresholds of 0.3mgkg -1 in 47% of Amaranthus vegetables. In bananas, 20% of samples contained Pb concentrations that exceeded the WHO/FAO recommended threshold of 0.3mgkg -1 . However, risk assessment of local foods and water, based on hazard quotients (HQ values) revealed no potential health effects. The high external contamination of volunteers' toenails with some elements (even after a washing process) calls into question their use as a biomarker for metal exposure in human populations where feet are frequently exposed to soil dust. Any mitigation of Kilembe mine impacts should be aimed at remediation of agricultural soils, regulating the discharge of underground contaminated water but also containment of tailing erosion. Copyright © 2016 Elsevier B.V. All rights reserved.

Effects of bioturbation on environmental DNA migration through soil media

PubMed Central

2018-01-01

Extracting and identifying genetic material from environmental media (i.e. water and soil) presents a unique opportunity for researchers to assess biotic diversity and ecosystem health with increased speed and decreased cost as compared to traditional methods (e.g. trapping). The heterogeneity of soil mineralogy, spatial and temporal variations however present unique challenges to sampling and interpreting results. Specifically, fate/transport of genetic material in the terrestrial environment represents a substantial data gap. Here we investigate to what degree, benthic fauna transport genetic material through soil. Using the red worm (Eisenia fetida), we investigate how natural movement through artificial soil affect the transport of genetic material. All experiments were run in Frabill® Habitat® II worm systems with approximately 5 cm depth of artificial soil. We selected an “exotic” source of DNA not expected to be present in soil, zebrafish (Danio rerio) tissue. Experiment groups contained homogenized zebrafish tissue placed in a defined location combined with a varying number of worms (10, 30 or 50 worms per experimental group). Experimental groups comprised two controls and three treatment groups (representing different worm biomass) in triplicate. A total of 210 soil samples were randomly collected over the course of 15 days to investigate the degree of genetic transfer, and the rate of detection. Positive detections were identified in 14% - 38% of samples across treatment groups, with an overall detection rate of 25%. These findings highlight two important issues when utilizing environmental DNA for biologic assessments. First, benthic fauna are capable of redistributing genetic material through a soil matrix. Second, despite a defined sample container and abundance of worm biomass, as many as 86% of the samples were negative. This has substantial implications for researchers and managers who wish to interpret environmental DNA results from terrestrial systems. Studies such as these will aid in future study protocol design and sample collection methodology. PMID:29689092

We Did This Before - The Lunar Receiving Laboratory (1969-1972)

NASA Technical Reports Server (NTRS)

Allen, Carlton; Allton, Judith

2011-01-01

The six Apollo missions to the lunar surface, between 1969 and 1972, returned 2,196 individual rock, soil and core samples, with a total mass of 381.69 kg. The astronauts selected samples, photographed the rocks and soils prior to collection, packaged them in uniquely identified containers, and transported them to the Lunar Module

Results of the radiological survey at the Town of Tonawanda Landfill, Tonawanda, New York (TNY001)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rodriguez, R.E.; Murray, M.E.; Uziel, M.S.

At the request of the US Department of Energy (DOE), a team from Oak Ridge National Laboratory conducted a radiological survey at the Town of Tonawanda Landfill, Tonawanda, New York. The survey was performed in September 1991. The purpose of the survey was to determine if radioactive materials from work performed under government contract at the Linde Air Products Division of Union Carbide Corporation, Tonawanda, New York, had been deposited in the landfill. The survey included a surface gamma scan and the collection of soil samples for radionuclide analyses. Results of the survey suggest that material originating at the Lindemore » plant may have been deposited in the landfill. Soil samples S54 and B12 contained technologically enhanced levels of [sup 238]U not unlike the product formerly produced by the Linde plant. In contrast, samples B4A, B5A and B7B, containing elevated concentrations of [sup 226]Ra and [sup 230]Th with much lower concentrations of [sup 238]U, were similar to the residue or byproduct of the refinery operation conducted at the Linde plant. In 24 instances, soil samples from the Town of Tonawanda Landfill exceeded DOE guideline values for [sup 238]U, [sup 226]Ra, and/or [sup 230]Th in surface or subsurface soil. Nine of these samples contained radionuclide concentrations more than 30 times the guideline value.« less

Effects of digestion, chemical separation, and deposition on Po-210 quantitative analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Seiner, Brienne N.; Morley, Shannon M.; Beacham, Tere A.

Polonium-210 is a radioactive isotope often used to study sedimentation processes, food chains, aerosol behavior, and atmospheric circulations related to environmental sciences. Materials for the analysis of Po-210 range from tobacco leaves or cotton fibers, to soils and sediments. The purpose of this work was to determine polonium losses from a variety of sample types (soil, cotton fiber, and air filter) due to digestion technique, chemical separation, and deposition method for alpha energy analysis. Results demonstrated that yields from a perchloric acid wet-ash were similar to that from a microwave digestion. Both were greater than the dry-ash procedure. The poloniummore » yield from the perchloric acid wet ash was 87 ± 5%, the microwave digestion had a yield of 100 ± 7%, and the dry ash had a yield of 38 ± 5%. The chemical separation of polonium by an anion exchange resin was used only on the soil samples due to the complex nature of this sample. The yield of Po-209 tracer after chemical separation and deposition for alpha analysis was 83 ± 7% for the soil samples. Spontaneous deposition yields for the cotton and air filters were 87 ± 4% and 92 ± 6%, respectively. Based on the overall process yields for each sample type the amount of Po-210 was quantified using alpha energy analysis. The soil contained 0.18 ± 0.08 Bq/g, the cotton swipe contained 0.7 mBq/g, and the air filter contained 0.04 ± 0.02 mBq/g. High and robust yields of polonium are possible using a suitable digestion, separation, and deposition method.« less

Energetic Materials Effects on Essential Soil Processes: Decomposition of Orchard Grass (Dactylis glomerata) Litter in Soil Contaminated with Energetic Materials

DTIC Science & Technology

2014-02-01

moisture level of 14% dry soil mass was maintained for the duration of the study by weekly additions of ASTM Type I water. Soil samples were collected...maintain the initial soil moisture level. One cluster of Orchard grass straw was harvested from a set of randomly selected replicate containers...decomposition is among the most integrating processes within the soil ecosystem because it involves complex interactions of soil microbial, plant , and

Bioaccumulation of pharmaceuticals and other anthropogenic waste indicators in earthworms from agricultural soil amended with biosolid or swine manure

USGS Publications Warehouse

Kinney, C.A.; Furlong, E.T.; Kolpin, D.W.; Burkhardt, M.R.; Zaugg, S.D.; Werner, S.L.; Bossio, J.P.; Benotti, M.J.

2008-01-01

Analysis of earthworms offers potential for assessing the transfer of organic anthropogenic waste indicators (AWIs) derived from land-applied biosolid or manure to biota. Earthworms and soil samples were collected from three Midwest agricultural fields to measure the presence and potential for transfer of 77 AWIs from land-applied biosolids and livestock manure to earthworms. The sites consisted of a soybean field with no amendments of human or livestock waste (Site 1), a soybean field amended with biosolids from a municipal wastewater treatment plant (Site 2), and a cornfield amended with swine manure (Site 3). The biosolid applied to Site 2 contained a diverse composition of 28 AWIs, reflecting the presence of human-use compounds. The swine manure contained 12 AWIs, and was dominated by biogenic sterols. Soil and earthworm samples were collected in the spring (about 30 days after soil amendment) and fall (140-155 days after soil amendment) at all field sites. Soils from Site 1 contained 21 AWIs and soil from Sites 2 and 3 contained 19 AWIs. The AWI profiles at Sites 2 and 3 generally reflected the relative composition of AWIs present in waste material applied. There were 20 AWIs detected in earthworms from Site 1 (three compounds exceeding concentrations of 1000 ??g/kg), 25 AWIs in earthworms from Site 2 (seven compounds exceeding concentrations of 1000 ??g/kg), and 21 AWIs in earthworms from Site 3 (five compounds exceeding concentrations of 1000 ??g/kg). A number of compounds thatwere present in the earthworm tissue were at concentrations less than reporting levels in the corresponding soil samples. The AWIs detected in earthworm tissue from the three field sites included pharmaceuticals, synthetic fragrances, detergent metabolites, polycyclic aromatic hydrocarbons (PAHs), biogenic sterols, disinfectants, and pesticides, reflecting a wide range of physicochemical properties. For those contaminants detected in earthworm tissue and soil, bioaccumulation factors (BAF) ranged from 0.05 (galaxolide) to 27 (triclosan). This study documents that when AWIs are present in source materials that are land applied, such as biosolids and swine manure, AWIs can be transferred to earthworms. ?? 2008 American Chemical Society.

Analysis of Bacterial Community Structure in Sulfurous-Oil-Containing Soils and Detection of Species Carrying Dibenzothiophene Desulfurization (dsz) Genes

PubMed Central

Duarte, Gabriela Frois; Rosado, Alexandre Soares; Seldin, Lucy; de Araujo, Welington; van Elsas, Jan Dirk

2001-01-01

The selective effects of sulfur-containing hydrocarbons, with respect to changes in bacterial community structure and selection of desulfurizing organisms and genes, were studied in soil. Samples taken from a polluted field soil (A) along a concentration gradient of sulfurous oil and from soil microcosms treated with dibenzothiophene (DBT)-containing petroleum (FSL soil) were analyzed. Analyses included plate counts of total bacteria and of DBT utilizers, molecular community profiling via soil DNA-based PCR-denaturing gradient gel electrophoresis (PCR-DGGE), and detection of genes that encode enzymes involved in the desulfurization of hydrocarbons, i.e., dszA, dszB, and dszC.Data obtained from the A soil showed no discriminating effects of oil levels on the culturable bacterial numbers on either medium used. Generally, counts of DBT degraders were 10- to 100-fold lower than the total culturable counts. However, PCR-DGGE showed that the numbers of bands detected in the molecular community profiles decreased with increasing oil content of the soil. Analysis of the sequences of three prominent bands of the profiles generated with the highly polluted soil samples suggested that the underlying organisms were related to Actinomyces sp., Arthrobacter sp., and a bacterium of uncertain affiliation. dszA, dszB, and dszC genes were present in all A soil samples, whereas a range of unpolluted soils gave negative results in this analysis. Results from the study of FSL soil revealed minor effects of the petroleum-DBT treatment on culturable bacterial numbers and clear effects on the DBT-utilizing communities. The molecular community profiles were largely stable over time in the untreated soil, whereas they showed a progressive change over time following treatment with DBT-containing petroleum. Direct PCR assessment revealed the presence of dszB-related signals in the untreated FSL soil and the apparent selection of dszA- and dszC-related sequences by the petroleum-DBT treatment. PCR-DGGE applied to sequential enrichment cultures in DBT-containing sulfur-free basal salts medium prepared from the A and treated FSL soils revealed the selection of up to 10 distinct bands. Sequencing a subset of these bands provided evidence for the presence of organisms related to Pseudomonas putida, a Pseudomonas sp., Stenotrophomonas maltophilia, and Rhodococcus erythropolis. Several of 52 colonies obtained from the A and FSL soils on agar plates with DBT as the sole sulfur source produced bands that matched the migration of bands selected in the enrichment cultures. Evidence for the presence of dszB in 12 strains was obtained, whereas dszA and dszC genes were found in only 7 and 6 strains, respectively. Most of the strains carrying dszA or dszC were classified as R. erythropolis related, and all revealed the capacity to desulfurize DBT. A comparison of 37 dszA sequences, obtained via PCR from the A and FSL soils, from enrichments of these soils, and from isolates, revealed the great similarity of all sequences to the canonical (R. erythropolis strain IGTS8) dszA sequence and a large degree of internal conservation. The 37 sequences recovered were grouped in three clusters. One group, consisting of 30 sequences, was minimally 98% related to the IGTS8 sequence, a second group of 2 sequences was slightly different, and a third group of 5 sequences was 95% similar. The first two groups contained sequences obtained from both soil types and enrichment cultures (including isolates), but the last consisted of sequences obtained directly from the polluted A soil. PMID:11229891

Chemical Analysis of Soils: An Environmental Chemistry Laboratory for Undergraduate Science Majors.

ERIC Educational Resources Information Center

Willey, Joan D.; Avery, G. Brooks, Jr.; Manock, John J.; Skrabal, Stephen A.; Stehman, Charles F.

1999-01-01

Describes a laboratory exercise for undergraduate science students in which they evaluate soil samples for various parameters related to suitability for crop production and capability for retention of contaminants. (Contains 18 references.) (WRM)

Combination of a Fast Cleanup Procedure and a DR-CALUX® Bioassay for Dioxin Surveillance in Taiwanese Soils

PubMed Central

Lin, Ding-Yan; Lee, Yi-Pin; Li, Chiu-Ping; Chi, Kai-Hsien; Liang, Bo-Wei P.; Liu, Wen-Yao; Wang, Chih-Cheng; Lin, Susana; Chen, Ting-Chien; Yeh, Kuei-Jyum C.; Hsu, Ping-Chi; Hsu, Yi-Chyun; Chao, How-Ran; Tsou, Tsui-Chun

2014-01-01

Our goal was to determine dioxin levels in 800 soil samples collected from Taiwan. An in vitro DR-CALUX® assay was carried out with the help of an automated Soxhlet system and fast cleanup column. The mean dioxin level of 800 soil samples was 36.0 pg-bioanalytical equivalents (BEQs)/g dry weight (d.w.). Soil dioxin-BEQs were higher in northern Taiwan (61.8 pg-BEQ/g d.w.) than in central, southern, and eastern Taiwan (22.2, 24.9, and 7.80 pg-BEQ/g d.w., respectively). Analysis of multiple linear regression models identified four major predictors of dioxin-BEQs including soil sampling location (β = 0.097, p < 0.001), land use (β = 0.065, p < 0.001), soil brightness (β = 0.170, p < 0.001), and soil moisture (β = 0.051, p = 0.020), with adjusted R2 = 0.947 (p < 0.001) (n = 662). An univariate logistic regression analysis with the cut-off point of 33.4 pg-BEQ/g d.w. showed significant odds ratios (ORs) for soil sampling location (OR = 2.43, p < 0.001), land use (OR = 1.47, p < 0.001), and soil brightness (OR = 2.83, p = 0.009). In conclusion, four variables, including soil sampling location, land use, soil brightness, and soil moisture, may be related to soil-dioxin contamination. Soil samples collected in northern Taiwan, and especially in Bade City, soils near industrial areas, and soils with darker color may contain higher dioxin-BEQ levels. PMID:24806195

Petrographic and petrological studies of lunar rocks. [Apollo 15 breccias and Russian tektites

NASA Technical Reports Server (NTRS)

Winzer, S. R.

1978-01-01

Clasts, rind glass, matrix glass, and matrix minerals from five Apollo 15 glass-coated breccias (15255, 15286, 15465, 15466, and 15505) were studied optically and with the SEM/microprobe. Rind glass compositions differ from sample to sample, but are identical, or nearly so, to the local soil, suggesting their origin by fusion of that soil. Most breccia samples contain green or colorless glass spheres identical to the Apollo 15 green glasses. These glasses, along with other glass shards and fragments, indicate a large soil component is present in the breccias. Clast populations include basalts and gabbros containing phases highly enriched in iron, indicative of extreme differentiation or fractional crystallization. Impact melts, anorthosites, and minor amounts of ANT suite material are also present among the clasts. Tektite glasses, impact melts, and breccias from the Zhamanshin structure, USSR, were also studied. Basic tektite glasses were found to be identical in composition to impact melts from the structure, but no satisfactory parent material has been identified in the limited suite of samples available.

Soil hydric characteristics and environmental ice nuclei influence supercooling capacity of hatchling painted turtles Chrysemys picta.

PubMed

Costanzo, J P; Litzgus, J D; Iverson, J B; Lee, R E

1998-11-01

Hatchling painted turtles (Chrysemys picta) hibernate in their shallow natal nests where temperatures occasionally fall below -10 C during cold winters. Because the thermal limit of freeze tolerance in this species is approximately -4 C, hatchlings rely on supercooling to survive exposure to extreme cold. We investigated the influence of environmental ice nuclei on susceptibility to inoculative freezing in hatchling C. picta indigenous to the Sandhills of west-central Nebraska. In the absence of external ice nuclei, hatchlings cooled to -14.6 1.9 C (mean s.e.m.; N=5) before spontaneously freezing. Supercooling capacity varied markedly among turtles cooled in physical contact with sandy soil collected from nesting locales or samples of the native soil to which water-binding agents (clay or peat) had been added, despite the fact that all substrata contained the same amount of moisture (7.5 % moisture, w/w). The temperature of crystallization (Tc) of turtles exposed to frozen native soil was -1.6 0.4 C (N=5), whereas turtles exposed to frozen soil/clay and soil/peat mixtures supercooled extensively (mean Tc values approximately -13 C). Hatchlings cooled in contact with drier (less than or equal to 4 % moisture) native soil also supercooled extensively. Thus, inoculative freezing is promoted by exposure to sandy soils containing abundant moisture and little clay or organic matter. Soil collected at turtle nesting locales in mid and late winter contained variable amounts of moisture (4-15 % w/w) and organic matter (1-3 % w/w). In addition to ice, the soil at turtle nesting locales may harbor inorganic and organic ice nuclei that may also seed the freezing of hatchlings. Bulk samples of native soil, which were autoclaved to destroy any organic nuclei, nucleated aqueous solutions at approximately -7 C (Tc range -6.1 to -8.2 C). Non-autoclaved samples contained water-extractable, presumably organic, ice nuclei (Tc range -4.4 to -5.3 C). Ice nuclei of both classes varied in potency among turtle nesting locales. Interaction with ice nuclei in the winter microenvironment determines whether hatchling C. picta remain supercooled or freeze and may ultimately account for differential mortality in nests at a given locale and for variation in winter survival rates among populations.

Assessment of subsurface chlorinated solvent contamination using tree cores at the front street site and a former dry cleaning facility at the Riverfront Superfund site, New Haven, Missouri, 1999-2003

USGS Publications Warehouse

Schumacher, John G.; Struckhoff, Garrett C.; Burken, Joel G.

2004-01-01

Tree-core sampling has been a reliable and inexpensive tool to quickly assess the presence of shallow (less than about 30 feet deep) tetrachloroethene (PCE) and trichloroethene (TCE) contamination in soils and ground water at the Riverfront Superfund Site. This report presents the results of tree-core sampling that was successfully used to determine the presence and extent of chlorinated solvent contamination at two sites, the Front Street site (operable unit OU1) and the former dry cleaning facility, that are part of the overall Riverfront Superfund Site. Traditional soil and ground-water sampling at these two sites later confirmed the results from the tree-core sampling. Results obtained from the tree-core sampling were used to design and focus subsequent soil and ground-water investigations, resulting in substantial savings in time and site assessment costs. The Front Street site is a small (less than 1-acre) site located on the Missouri River alluvium in downtown New Haven, Missouri, about 500 feet from the south bank of the Missouri River. Tree-core sampling detected the presence of subsurface PCE contamination at the Front Street site and beneath residential property downgradient from the site. Core samples from trees at the site contained PCE concentrations as large as 3,850 mg-h/kg (micrograms in headspace per kilogram of wet core) and TCE concentrations as large as 249 mg-h/kg. Soils at the Front Street site contained PCE concentrations as large as 6,200,000 mg/kg (micrograms per kilogram) and ground-water samples contained PCE concentrations as large as 11,000 mg/L (micrograms per liter). The former dry cleaning facility is located at the base of the upland that forms the south bank of the Missouri River alluvial valley. Tree-core sampling did not indicate the presence of PCE or TCE contamination at the former dry cleaning facility, a finding that was later confirmed by the analyses of soil samples collected from the site. The lateral extent of PCE contamination in trees was in close agreement with the extent of subsurface PCE contamination determined using traditional soil and ground-water sampling methods. Trees growing in soils containing PCE concentrations of 60 to 5,700 mg/kg or larger or overlying ground water containing PCE concentrations from 5 to 11,000 mg/L generally contained detectable concentrations of PCE. The depth to contaminated ground water was about 20 to 25 feet below the land surface. Significant quantitative relations [probability (p) values of less than 0.05 and correlation coefficient (r2) values of 0.88 to 0.90] were found between PCE concentrations in trees and subsurface soils between 4 and 16 feet deep. The relation between PCE concentrations in trees and underlying ground water was less apparent (r2 value of 0.17) and the poor relation is thought to be the result of equilibrium with PCE concentrations in soil and vapor in the unsaturated zone. Based on PCE concentrations detected in trees at the Front Street site and trees growing along contaminated tributaries in other operable units, and from field hydroponic experiments using hybrid poplar cuttings, analysis of tree-core samples appears to be able to detect subsurface PCE contamination in soils at levels of several hundred micrograms per liter or less and PCE concentrations in the range of 8 to 30 mg/L in ground water in direct contact with the roots. Loss of PCE from tree trunks by diffusion resulted in an exponential decrease in PCE concentrations with increasing height above the land surface in most trees. The rate of loss also appeared to be a function of the size and growth characteristics of the tree as some trees exhibited a linear loss with increasing height. Diffusional loss of PCE in small (0.5-inch diameter) trees was observed to occur at a rate more than 10 times larger than in trees 6.5 inches in diameter. Concentrations of PCE also exhibited directional variability around the tree trunks and concentration differe

Antibiotic resistance of microorganisms in agricultural soils in Russia

NASA Astrophysics Data System (ADS)

Danilova, N. V.; Galitskaya, P. Yu; Selivanovskaya, S. Yu

2018-01-01

Antibiotics are medicines that are widely used in livestock production not only for the prevention and treatment of infectious diseases, but also for accelerating the growth of animals. The application of manure for fertilizing agricultural soils leads to the entry into the soil ecosystem not only of the antibiotics themselves, but also the resistance genes to them. In this study, 30 samples of arable soils were tested for the presence of the tet(X) gene, which encodes bacterial resistance to antibiotics of the tetracycline group. Using real-time PCR, it was found that 27 out of 30 soil samples contained tet(X). 52% of these samples were heavily contaminated, 34% had a medium level of contamination and 14% were slightly contaminated by the resistance gene tet(X).

Clay Chemistry's Influence on the Average Carbon Content and Particle Size at the Ninety-Six Historical Site, South Carolina

NASA Astrophysics Data System (ADS)

Lintz, L.; Werts, S. P.

2014-12-01

The Ninety-Six National Historic Site is located in Greenwood County, SC. Recent geologic mapping of this area has revealed differences in soil properties over short distances within the park. We studied the chemistry of the clay minerals found within the soils to see if there was a correlation between the amounts of soil organic carbon contained in the soil and particle size in individual soil horizons. Three different vegetation areas, including an old field, a deciduous forest, and a pine forest were selected to see what influence vegetation type had on the clay chemistry and carbon levels as well. Four samples containing the O, A, and B horizons were taken from each location and we studied the carbon and nitrogen content using an elemental analyzer, particle size using a Laser Diffraction Particle Size Analyzer, and clay mineralogy with powder X-ray diffraction of each soil sample. Samples from the old field and pine forest gave an overall negative correlation between carbon content and clay percentage, which is against the normal trend for Southern Piedmont Ultisols. The deciduous forest samples gave no correlation at all between its carbon content and clay percentage. Together, all three locations show the same negative relationship, while once separated into vegetation type and A and B horizons it shows even more abnormal relationships of negative while several show no correlation (R2= 0.007403- 0.56268). Using powder XRD, we ran clay samples from each A and B horizon for the clay mineralogy. All three vegetation areas had the same results of containing quartz, kaolinite, and Fe oxides, therefore, clay chemistry is not a reason behind the abnormal trend of a negative correlation between average carbon content and clay percentage. Considering that all three locations have the same climate, topography, and parent material of metagranite, it could be reasonable to assume these results are a factor of environmental and biological influences rather than clay type.

Assessment of groundwater and soil quality for agricultural purposes in Kopruoren basin, Kutahya, Turkey

NASA Astrophysics Data System (ADS)

Arslan, Sebnem

2017-07-01

This research evaluated the irrigation water and agricultural soil quality in the Kopruoren Basin by using hierarchical cluster analysis. Physico-chemical properties and major ion chemistry of 19 groundwater samples were used to determine the irrigation water quality indices. The results revealed out that the groundwaters are in general suitable for irrigation and have low sodium hazard, although they are very hard in nature due to the dominant presence of Ca+2, Mg+2 and HCO3- ions. Water samples contain arsenic in concentrations below the recommended guidelines for irrigation (59.7 ± 14.7 μg/l), however, arsenic concentrations in 89% of the 9 soil samples exceed the maximum allowable concentrations set for agricultural soils (81 ± 24.3 mg/kg). Nickel element, albeit not present in high concentrations in water samples, is enriched in all of the agricultural soil samples (390 ± 118.2 mg/kg). Hierarchical cluster analysis studies conducted to identify the sources of chemical constituents in water and soil samples elicited that the chemistry of the soils in the study area are highly impacted by the soil parent material and both geogenic and anthropogenic pollution sources are responsible for the metal contents of the soil samples. On the other hand, water chemistry in the area is affected by water-rock interactions, anthropogenic and agricultural pollution.

Response of soil microorganisms to radioactive oil waste: results from a leaching experiment

NASA Astrophysics Data System (ADS)

Galitskaya, P.; Biktasheva, L.; Saveliev, A.; Ratering, S.; Schnell, S.; Selivanovskaya, S.

2015-06-01

Oil wastes produced in large amounts in the processes of oil extraction, refining, and transportation are of great environmental concern because of their mutagenicity, toxicity, high fire hazardousness, and hydrophobicity. About 40% of these wastes contain radionuclides; however, the effects of oil products and radionuclides on soil microorganisms are frequently studied separately. The effects on various microbial parameters of raw waste containing 575 g of total petroleum hydrocarbons (TPH) kg-1 waste, 4.4 of 226Ra, 2.8 of 232Th, and 1.3 kBq kg-1 of 40K and its treated variant (1.6 g kg-1 of TPH, 7.9 of 226Ra, 3.9 of 232Th, and 183 kBq kg-1 of 40K) were examined in a leaching column experiment to separate the effects of hydrocarbons from those of radioactive elements. The raw waste sample (H) was collected from tanks during cleaning and maintenance, and a treated waste sample (R) was obtained from equipment for oil waste treatment. Thermal steam treatment is used in the production yard to reduce the oil content. The disposal of H waste samples on the soil surface led to an increase in the TPH content in soil: it became 3.5, 2.8, and 2.2 times higher in the upper (0-20 cm), middle (20-40 cm), and lower (40-60cm) layers, respectively. Activity concentrations of 226Ra and 232Th increased in soil sampled from both H- and R- columns in comparison to their concentrations in control soil. The activity concentrations of these two elements in samples taken from the upper and middle layers were much higher for the R-column compared to the H-column, despite the fact that the amount of waste added to the columns was equalized with respect to the activity concentrations of radionuclides. The H waste containing both TPH and radionuclides affected the functioning of the soil microbial community, and the effect was more pronounced in the upper layer of the column. Metabolic quotient and cellulase activity were the most sensitive microbial parameters as their levels were changed 5-1.4 times in comparison to control ones. Changes in soil functional characteristics caused by the treated waste containing mainly radionuclides were not observed. PCR-SSCP (polymerase chain reaction - single strand conformation polymorphism) analysis followed by MDS (metric multidimensional scaling) and clustering analysis revealed that the shifts in microbial community structure were affected by both hydrocarbons and radioactivity. Thus, molecular methods permitted to reveal the effects on soil microbial community not only from hydrocarbons, which significantly altered functional characteristics of soil microbiome, but also from radioactive elements.

Proton-Induced X-Ray Emission Analysis of Crematorium Emissions

NASA Astrophysics Data System (ADS)

Ali, Salina; Nadareski, Benjamin; Yoskowitz, Joshua; Labrake, Scott; Vineyard, Michael

2014-09-01

There has been considerable debate in recent years about possible mercury emissions from crematoria due to amalgam tooth restorations. We have performed a proton-induced X-ray emission (PIXE) analysis of aerosol and soil samples taken near the Vale Cemetery Crematorium in Schenectady, NY, to address this concern. The aerosol samples were collected on the roof of the crematorium using a nine-stage, cascade impactor that separates the particulate matter by aerodynamic diameter and deposits it onto thin Kapton foils. The soil samples were collected at several different distances from the crematorium and compressed into pellets with a hydraulic press. The Kapton foils containing the aerosol samples and the soil pellets were bombarded with 2.2-MeV protons from the 1.1-MV tandem Pelletron accelerator in the Union College Ion-Beam Analysis Laboratory. We measured significant concentrations of sulfur, phosphorus, potassium, calcium, and iron, but essentially no mercury in the aerosol samples. The lower limit of detection for airborne mercury in this experiment was approximately 0.2 ng / m3. The PIXE analysis of the soil samples showed the presence of elements commonly found in soil (Si, K, Ca, Ti, Mn, Fe), but no trace of mercury. There has been considerable debate in recent years about possible mercury emissions from crematoria due to amalgam tooth restorations. We have performed a proton-induced X-ray emission (PIXE) analysis of aerosol and soil samples taken near the Vale Cemetery Crematorium in Schenectady, NY, to address this concern. The aerosol samples were collected on the roof of the crematorium using a nine-stage, cascade impactor that separates the particulate matter by aerodynamic diameter and deposits it onto thin Kapton foils. The soil samples were collected at several different distances from the crematorium and compressed into pellets with a hydraulic press. The Kapton foils containing the aerosol samples and the soil pellets were bombarded with 2.2-MeV protons from the 1.1-MV tandem Pelletron accelerator in the Union College Ion-Beam Analysis Laboratory. We measured significant concentrations of sulfur, phosphorus, potassium, calcium, and iron, but essentially no mercury in the aerosol samples. The lower limit of detection for airborne mercury in this experiment was approximately 0.2 ng / m3. The PIXE analysis of the soil samples showed the presence of elements commonly found in soil (Si, K, Ca, Ti, Mn, Fe), but no trace of mercury. Union College Department of Physics and Astronomy.

NG09 And CTBT On-Site Inspection Noble Gas Sampling and Analysis Requirements

NASA Astrophysics Data System (ADS)

Carrigan, Charles R.; Tanaka, Junichi

2010-05-01

A provision of the Comprehensive Test Ban Treaty (CTBT) allows on-site inspections (OSIs) of suspect nuclear sites to determine if the occurrence of a detected event is nuclear in origin. For an underground nuclear explosion (UNE), the potential success of an OSI depends significantly on the containment scenario of the alleged event as well as the application of air and soil-gas radionuclide sampling techniques in a manner that takes into account both the suspect site geology and the gas transport physics. UNE scenarios may be broadly divided into categories involving the level of containment. The simplest to detect is a UNE that vents a significant portion of its radionuclide inventory and is readily detectable at distance by the International Monitoring System (IMS). The most well contained subsurface events will only be detectable during an OSI. In such cases, 37 Ar and radioactive xenon cavity gases may reach the surface through either "micro-seepage" or the barometric pumping process and only the careful siting of sampling locations, timing of sampling and application of the most site-appropriate atmospheric and soil-gas capturing methods will result in a confirmatory signal. The OSI noble gas field tests NG09 was recently held in Stupava, Slovakia to consider, in addition to other field sampling and analysis techniques, drilling and subsurface noble gas extraction methods that might be applied during an OSI. One of the experiments focused on challenges to soil-gas sampling near the soil-atmosphere interface. During withdrawal of soil gas from shallow, subsurface sample points, atmospheric dilution of the sample and the potential for introduction of unwanted atmospheric gases were considered. Tests were designed to evaluate surface infiltration and the ability of inflatable well-packers to seal out atmospheric gases during sample acquisition. We discuss these tests along with some model-based predictions regarding infiltration under different near-surface hydrologic conditions. We also consider how naturally occurring as well as introduced (e.g., SF6) soil-gas tracers might be used to guard against the possibility of atmospheric contamination of soil gases while sampling during an actual OSI. The views expressed here do not necessarily reflect the opinion of the United States Government, the United States Department of Energy, or Lawrence Livermore National Laboratory. This work has been performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344. LLNL-ABS-418791

Infrared spectroscopy of the mineralogy of coprolites from Brean Down: evidence of past human activities and animal husbandry

NASA Astrophysics Data System (ADS)

Allen, Samantha D. M.; Almond, Matthew J.; Bell, Martin G.; Hollins, Peter; Marks, Sonja; Mortimore, Joanne L.

2002-03-01

The mineralogy of 11 concretions from the Bronze Age settlement horizons at Brean Down near Weston-super-Mare, Somerset, UK, has been examined by infrared spectroscopy. The concretions are found to contain calcite and apatite and, in some cases, quartz. Four further concretions from the later Iron Age Meare Village, soil samples from Brean Down and mineralised samples of known faecal origin from a cesspit within the Tudor Merchant's house in Tenby have been similarly examined. It is found that all samples contain calcite, but only the concretions and the Tenby cesspit samples contain apatite. None of the soil samples contain apatite, although these are relatively high in quartz. This suggests that the concretions are coprolites and that the apatite has a biological origin in small bone fragments. The infrared study is backed up by scanning electron microscopy which confirms the presence of phosphorus in the coprolite samples and shows a morphology suggestive of the presence of bone fragments; it is likely, therefore, that the coprolites result from a carnivore—most probably from dogs. The findings show the usefulness of infrared spectroscopy for the rapid identification of mineralised coprolitic material from archaeological sites.

Removal of Cr(VI) by nanoscale zero-valent iron (nZVI) from soil contaminated with tannery wastes.

PubMed

Singh, Ritu; Misra, Virendra; Singh, Rana Pratap

2012-02-01

The illegal disposal of tannery wastes at Rania, Kanpur has resulted in accumulation of hexavalent chromium [Cr(VI)], a toxic heavy metal in soil posing risk to human health and environment. 27 soil samples were collected at various depths from Rania for the assessment of Cr(VI) level in soil. Out of 27 samples, five samples had shown significant level of Cr(VI) with an average concentration of 15.84 mg Kg(-1). Varied doses of nanoscale zero-valent iron (nZVI) were applied on Cr(VI) containing soil samples for remediation of Cr(VI). Results showed that 0.10 g L(-1) nZVI completely reduces Cr(VI) within 120 min following pseudo first order kinetics. Further, to test the efficacy of nZVI in field, soil windrow experiments were performed at the contaminated site. nZVI showed significant Cr(VI) reduction at field also, indicating it an effective tool for managing sites contaminated with Cr(VI).

Evaluation of soil water stable isotope analysis by H2O(liquid)-H2O(vapor) equilibration method

NASA Astrophysics Data System (ADS)

Gralher, Benjamin; Stumpp, Christine

2014-05-01

Environmental tracers like stable isotopes of water (δ18O, δ2H) have proven to be valuable tools to study water flow and transport processes in soils. Recently, a new technique for soil water isotope analysis has been developed that employs a vapor phase being in isothermal equilibrium with the liquid phase of interest. This has increased the potential application of water stable isotopes in unsaturated zone studies as it supersedes laborious extraction of soil water. However, uncertainties of analysis and influencing factors need to be considered. Therefore, the objective of this study was to evaluate different methodologies of analysing stable isotopes in soil water in order to reduce measurement uncertainty. The methodologies included different preparation procedures of soil cores for equilibration of vapor and soil water as well as raw data correction. Two different inflatable sample containers (freezer bags, bags containing a metal layer) and equilibration atmospheres (N2, dry air) were tested. The results showed that uncertainties for δ18O were higher compared to δ2H that cannot be attributed to any specific detail of the processing routine. Particularly, soil samples with high contents of organic matter showed an apparent isotope enrichment which is indicative for fractionation due to evaporation. However, comparison of water samples obtained from suction cups with the local meteoric water line indicated negligible fractionation processes in the investigated soils. Therefore, a method was developed to correct the raw data reducing the uncertainties of the analysis.. We conclude that the evaluated method is advantageous over traditional methods regarding simplicity, resource requirements and sample throughput but careful consideration needs to be made regarding sample handling and data processing. Thus, stable isotopes of water are still a good tool to determine water flow and transport processes in the unsaturated zone.

Soil data from Picea mariana stands near delta junction, Alaska of different ages and soil drainage type

USGS Publications Warehouse

Manies, Kristen L.; Harden, Jennifer W.; Silva, Steven R.; Briggs, Paul H.; Schmid, Brian M.

2004-01-01

The U.S. Geological Survey project Fate of Carbon in Alaskan Landscapes (FOCAL) is studying the effect of fire and soil drainage on soil carbon storage in the boreal forest. This project has selected several sites to study within central Alaska of varying ages (time since fire) and soil drainage types. This report describes the location of these sampling sites, as well as the procedures used to describe, sample, and analyze the soils. This report also contains data tables with this information, including, but not limited to field descriptions, bulk density, particle size distribution, moisture content, carbon (C) concentration, nitrogen (N) concentration, isotopic data for C, and major, minor and trace elemental concentration.

Pesticides in soils and ground water in selected irrigated agricultural areas near Havre, Ronan, and Huntley, Montana

USGS Publications Warehouse

Clark, D.W.

1990-01-01

Three areas in Montana representing a range of agricultural practices and applied pesticides, were studied to document whether agricultural pesticides are being transported into the soil and shallow groundwater in irrigated areas. Analytical scans for triazine herbicides, organic-acid herbicides, and carbamate insecticides were performed on soil and shallow groundwater samples. The results indicate pesticide residue in both types of samples. The concentrations of pesticides in the groundwater were less than Federal health-advisory limits. At the Havre Agricultural Experiment Station, eight wells were installed at two sites. All four soil samples and two of four water samples collected after application of pesticides contained detectable concentrations of atrazine or dicamba. In an area where seed potatoes are grown near Ronan, eight wells were installed at two sites. Pesticides were not detected after initial application of pesticides and irrigation water. The site was resampled after irrigation water was reapplied, and aldicarb metabolities were detected in four of five soil samples and one of five water samples. At the Huntley Agricultural Experiment Station, five wells were installed in a no-tillage corn field where atrazine was applied in 1987. Soil and water samples were collected in June and July 1988; pesticides were not detected in any samples. Results indicate residue of two pesticides in soil samples and three soluble pesticides in groundwater samples. Therefore, irrigated agricultural areas in Montana might be susceptible to transport of soluble pesticides through permeable soil to the shallow groundwater system. (USGS)

Practice-Based Evidence Informs Environmental Health Policy and Regulation: A Case Study of Residential Lead-Soil Contamination in Rhode Island

PubMed Central

Thompson, Marcella Remer; Burdon, Andrea; Boekelheide, Kim

2013-01-01

Prior to 1978, the exteriors of Rhode Island's municipal water towers were painted with lead-containing paint. Over time, this lead-containing paint either flaked-off or was mechanically removed and deposited on adjacent residential properties. Residents challenged inconsistencies across state agencies and federal requirements for collecting and analyzing soil samples. The purpose of this case study was to evaluate the efficacy of Rhode Island Department of Health (RIDOH) soil sampling regulations in determining the extent of lead contamination on residential properties using real world data. Researchers interviewed key government personnel, reviewed written accounts of events and regulations, and extracted and compiled lead data from environmental soil sampling on 31 residential properties adjacent to six municipal water towers. Data were available for 498 core samples. Approximately 26% of the residential properties had lead soil concentrations >1,000 mg/kg. Overall, lead concentration was inversely related to distance from the water tower. Analysis indicated that surface samples alone were insufficient to classify a property as “lead safe”. Potential for misclassification using RIDOH regulations was 13%. For properties deemed initially “lead free”, the total number of samples was too few to analyze. Post-remediation lead-soil concentrations suggest the extent of lead contamination may have been deeper than initially determined. Additional data would improve the ability to draw more meaningful and generalized conclusions. Inconsistencies among regulatory agencies responsible for environmental health obfuscate transparency and erode the public's trust in the regulatory process. Recommendations for improvement include congruency across departmental regulations and specific modifications to soil sampling regulations reflective of lowered CDC reference blood lead value for children 1 to 5 years old (5μg/dL). While scientific research informed the initial development of these environmental health policies and regulations, practice-based evidence did not support their efficacy in context of real world practice. PMID:24055667

Regolith Evolved Gas Analyzer

NASA Technical Reports Server (NTRS)

Hoffman, John H.; Hedgecock, Jud; Nienaber, Terry; Cooper, Bonnie; Allen, Carlton; Ming, Doug

2000-01-01

The Regolith Evolved Gas Analyzer (REGA) is a high-temperature furnace and mass spectrometer instrument for determining the mineralogical composition and reactivity of soil samples. REGA provides key mineralogical and reactivity data that is needed to understand the soil chemistry of an asteroid, which then aids in determining in-situ which materials should be selected for return to earth. REGA is capable of conducting a number of direct soil measurements that are unique to this instrument. These experimental measurements include: (1) Mass spectrum analysis of evolved gases from soil samples as they are heated from ambient temperature to 900 C; and (2) Identification of liberated chemicals, e.g., water, oxygen, sulfur, chlorine, and fluorine. REGA would be placed on the surface of a near earth asteroid. It is an autonomous instrument that is controlled from earth but does the analysis of regolith materials automatically. The REGA instrument consists of four primary components: (1) a flight-proven mass spectrometer, (2) a high-temperature furnace, (3) a soil handling system, and (4) a microcontroller. An external arm containing a scoop or drill gathers regolith samples. A sample is placed in the inlet orifice where the finest-grained particles are sifted into a metering volume and subsequently moved into a crucible. A movable arm then places the crucible in the furnace. The furnace is closed, thereby sealing the inner volume to collect the evolved gases for analysis. Owing to the very low g forces on an asteroid compared to Mars or the moon, the sample must be moved from inlet to crucible by mechanical means rather than by gravity. As the soil sample is heated through a programmed pattern, the gases evolved at each temperature are passed through a transfer tube to the mass spectrometer for analysis and identification. Return data from the instrument will lead to new insights and discoveries including: (1) Identification of the molecular masses of all of the gases liberated from heated soil samples; (2) Identification of the asteroid soil mineralogy to aid in the selection process for returned samples; (3) Existence of oxygen in the asteroid soil and the potential for in-situ resource utilization (ISRU); and (4) Existence of water and other volatiles in the asteroid soil. Additional information is contained in the original extended abstract.

The effect of soil type on the bioremediation of petroleum contaminated soils.

PubMed

Haghollahi, Ali; Fazaelipoor, Mohammad Hassan; Schaffie, Mahin

2016-09-15

In this research the bioremediation of four different types of contaminated soils was monitored as a function of time and moisture content. The soils were categorized as sandy soil containing 100% sand (type I), clay soil containing more than 95% clay (type II), coarse grained soil containing 68% gravel and 32% sand (type III), and coarse grained with high clay content containing 40% gravel, 20% sand, and 40% clay (type IV). The initially clean soils were contaminated with gasoil to the concentration of 100 g/kg, and left on the floor for the evaporation of light hydrocarbons. A full factorial experimental design with soil type (four levels), and moisture content (10 and 20%) as the factors was employed. The soils were inoculated with petroleum degrading microorganisms. Soil samples were taken on days 90, 180, and 270, and the residual total petroleum hydrocarbon (TPH) was extracted using soxhlet apparatus. The moisture content of the soils was kept almost constant during the process by intermittent addition of water. The results showed that the efficiency of bioremediation was affected significantly by the soil type (Pvalue < 0.05). The removal percentage was the highest (70%) for the sandy soil with the initial TPH content of 69.62 g/kg, and the lowest for the clay soil (23.5%) with the initial TPH content of 69.70 g/kg. The effect of moisture content on bioremediation was not statistically significant for the investigated levels. The removal percentage in the clay soil was improved to 57% (within a month) in a separate experiment by more frequent mixing of the soil, indicating low availability of oxygen as a reason for low degradation of hydrocarbons in the clay soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Metal concentrations in schoolyard soils from New Orleans, Louisiana before and after Hurricanes Katrina and Rita.

PubMed

Presley, Steven M; Abel, Michael T; Austin, Galen P; Rainwater, Thomas R; Brown, Ray W; McDaniel, Les N; Marsland, Eric J; Fornerette, Ashley M; Dillard, Melvin L; Rigdon, Richard W; Kendall, Ronald J; Cobb, George P

2010-06-01

The long-term environmental impact and potential human health hazards resulting from Hurricanes Katrina and Rita throughout much of the United States Gulf Coast, particularly in the New Orleans, Louisiana, USA area are still being assessed and realized after more than four years. Numerous government agencies and private entities have collected environmental samples from throughout New Orleans and found concentrations of contaminants exceeding human health screening values as established by the United States Environmental Protection Agency (USEPA) for air, soil, and water. To further assess risks of exposure to toxic concentrations of soil contaminants for citizens, particularly children, returning to live in New Orleans following the storms, soils collected from schoolyards prior to Hurricane Katrina and after Hurricane Rita were screened for 26 metals. Concentrations exceeding USEPA Regional Screening Levels (USEPA-RSL), total exposure, non-cancer endpoints, for residential soils for arsenic (As), iron (Fe), lead (Pb), and thallium (Tl) were detected in soil samples collected from schoolyards both prior to Hurricane Katrina and after Hurricane Rita. Approximately 43% (9/21) of schoolyard soils collected prior to Hurricane Katrina contained Pb concentrations greater than 400mgkg(-1), and samples from four schoolyards collected after Hurricane Rita contained detectable Pb concentrations, with two exceeding 1700mgkg(-1). Thallium concentrations exceeded USEPA-RSL in samples collected from five schoolyards after Hurricane Rita. Based upon these findings and the known increased susceptibility of children to the effects of Pb exposure, a more extensive assessment of the soils in schoolyards, public parks and other residential areas of New Orleans for metal contaminants is warranted. 2010 Elsevier Ltd. All rights reserved.

Potential soil cleanup objectives for nitrogen-containing fertilizers at agrichemical facilities

USGS Publications Warehouse

Roy, W.R.; Krapac, I.G.

2006-01-01

Accidental and incidental chemical releases of nitrogen-containing fertilizers occur at retail agrichemical facilities. Because contaminated soil may threaten groundwater quality, the facility may require some type of site remediation. The purpose of this study was to apply the concepts of the Soil Screening Levels of the U.S. Environmental Protection Agency to derive soil cleanup objectives (SCO) that are protective of groundwater quality in Illinois for nitrogen as nitrate and as ammonium. The Soil Screening Levels are based on the solute transport mechanisms of sorption, volatilization, and groundwater dilution, and the contaminant-specific groundwater cleanup objective used to derive the SCO. Because nitrate is relatively unreactive, only groundwater dilution could be taken into account in the derivation of a SCO. Using a default groundwater objective for potable groundwater, an SCO of 38 mg N-NO3/kg was derived. For ammonium, however, the extent of sorption was measured using an uncontaminated, surface-soil sample (0 to 15 cm) of 10 different soil types that occur in Illinois and three gravel-fill samples from three different agrichemical facilities. Using a default groundwater objective, an SCO was derived for each soil type. The median SCO was 989 mg N-NH4/kg. The SCO calculated for each of the 10 soil and 3 fill samples was positively correlated with cation exchange capacity, clay content, and surface area. It was concluded that this approach can be used to derive either default of site-specific SCOs for nitrogen as nitrate and as ammonium for chemical releases. Copyright ?? Taylor & Francis Group, LLC.

Soil Rock Analyzer

NASA Technical Reports Server (NTRS)

1985-01-01

A redesigned version of a soil/rock analyzer developed by Martin Marietta under a Langley Research Center contract is being marketed by Aurora Tech, Inc. Known as the Aurora ATX-100, it has self-contained power, an oscilloscope, a liquid crystal readout, and a multichannel spectrum analyzer. It measures energy emissions to determine what elements in what percentages a sample contains. It is lightweight and may be used for mineral exploration, pollution monitoring, etc.

A new in-situ method to determine the apparent gas diffusion coefficient of soils

NASA Astrophysics Data System (ADS)

Laemmel, Thomas; Paulus, Sinikka; Schack-Kirchner, Helmer; Maier, Martin

2015-04-01

Soil aeration is an important factor for the biological activity in the soil and soil respiration. Generally, gas exchange between soil and atmosphere is assumed to be governed by diffusion and Fick's Law is used to describe the fluxes in the soil. The "apparent soil gas diffusion coefficient" represents the proportional factor between the flux and the gas concentration gradient in the soil and reflects the ability of the soil to "transport passively" gases through the soil. One common way to determine this coefficient is to take core samples in the field and determine it in the lab. Unfortunately this method is destructive and needs laborious field work and can only reflect a small fraction of the whole soil. As a consequence insecurity about the resulting effective diffusivity on the profile scale must remain. We developed a new in-situ method using new gas sampling device, tracer gas and inverse soil gas modelling. The gas sampling device contains several sampling depths and can be easily installed into vertical holes of an auger, which allows for fast installation of the system. At the lower end of the device inert tracer gas is injected continuously. The tracer gas diffuses into the surrounding soil. The resulting distribution of the tracer gas concentrations is used to deduce the diffusivity profile of the soil. For Finite Element Modeling of the gas sampling device/soil system the program COMSOL is used. We will present the results of a field campaign comparing the new in-situ method with lab measurements on soil cores. The new sampling pole has several interesting advantages: it can be used in-situ and over a long time; so it allows following modifications of diffusion coefficients in interaction with rain but also vegetation cycle and wind.

Sources of arsenic and fluoride in highly contaminated soils causing groundwater contamination in Punjab, Pakistan

DOE Office of Scientific and Technical Information (OSTI.GOV)

Farooqi, A.; Masuda, H.; Siddiqui, R.

2009-05-15

Highly contaminated groundwater, with arsenic (As) and fluoride (F{sup -}) concentrations of up to 2.4 and 22.8 mg/L, respectively, has been traced to anthropogenic inputs to the soil. In the present study, samples collected from the soil surface and sediments from the most heavily polluted area of Punjab were analyzed to determine the F{sup -} and As distribution in the soil. The surface soils mainly comprise permeable aeolian sediment on a Pleistocene terrace and layers of sand and silt on an alluvial flood plain. Although the alluvial sediments contain low levels of F, the terrace soils contain high concentrations ofmore » soluble F{sup -} (maximum, 16 mg/kg; mean, 4 mg/kg; pH > 8.0). Three anthropogenic sources were identified as fertilizers, combusted coal, and industrial waste, with phosphate fertilizer being the most significance source of F{sup -} accumulated in the soil. The mean concentration of As in the surface soil samples was 10.2 mg/kg, with the highest concentration being 35 mg/kg. The presence of high levels of As in the surface soil implies the contribution of air pollutants derived from coal combustion and the use of fertilizers. Intensive mineral weathering under oxidizing conditions produces highly alkaline water that dissolves the F{sup -} and As adsorbed on the soil, thus releasing it into the local groundwater.« less

Chemical compositions of subway particles in Seoul, Korea determined by a quantitative single particle analysis.

PubMed

Kang, Sunni; Hwang, HeeJin; Park, YooMyung; Kim, HyeKyoung; Ro, Chul-Un

2008-12-15

A novel single particle analytical technique, low-Z particle electron probe X-ray microanalysis, was applied to characterize seasonal subway samples collected at a subway station in Seoul, Korea. For all 8 samples collected twice in each season, 4 major types of subway particles, based on their chemical compositions, are significantly encountered: Fe-containing; soil-derived; carbonaceous; and secondary nitrate and/or sulfate particles. Fe-containing particles are generated indoors from wear processes at rail-wheel-brake interfaces while the others may be introduced mostly from the outdoor urban atmosphere. Fe-containing particles are the most frequently encountered with relative abundances in the range of 61-79%. In this study, it is shown that Fe-containing subway particles almost always exist either as partially or fully oxidized forms in underground subway microenvironments. Their relative abundances of Fe-containing particles increase as particle sizes decrease. Relative abundances of Fe-containing particles are higher in morning samples than in afternoon samples because of heavier train traffic in the morning. In the summertime samples, Fe-containing particles are the most abundantly encountered, whereas soil-derived and nitrate/sulfate particles are the least encountered, indicating the air-exchange between indoor and outdoor environments is limited in the summer, owing to the air-conditioning in the subway system. In our work, it was observed that the relative abundances of the particles of outdoor origin vary somewhat among seasonal samples to a lesser degree, reflecting that indoor emission sources predominate.

Space Weathering in the Fine Size Fractions of Lunar Soils: Soil Maturity Effects

NASA Technical Reports Server (NTRS)

Keller, L. P.; Wentworth, S. J.; McKay, D. S.; Taylor, L. A.; Pieters, C.; Morris, R. V.

1999-01-01

The effects of space weathering on the optical properties of lunar materials have been well documented. These effects include a reddened continuum slope, lowered albedo, and attenuated absorption features in reflectance spectra of lunar soils as compared to finely comminuted rocks from the same Apollo sites. However, the regolith processes that cause these effects are not well known, nor is the petrographic setting of the products of these processes fully understood. A Lunar Soil Characterization Consortium has been formed with the purpose of systematically integrating chemical and mineralogical data with the optical properties of lunar soils. Understanding space-weathering effects is critical in order to fully integrate the lunar sample collection with remotely-sensed data from recent robotic missions (e.g., Lunar Prospector, Clementine, and Galileo) We have shown that depositional processes (condensation of impact-derived vapors, sputter deposits, accreted impact material, e.g., splash glass, spherules, etc.) are a major factor in the modification of the optical surfaces of lunar regolith materials. In mature soils, it is the size and distribution of the nanophase metal in the soil grains that has the major effect on optical properties. In this report, we compare and contrast the space-weathering effects in an immature and a mature soil with similar elemental compositions. For this study, we analyzed <10 micron sieve fractions of two Apollo 17 soils, 79221 (mature, Is/FeO = 81) and 71061 (immature, Is/FeO = 14). Details of the sieving procedures and allocation scheme are given else where. The results of other detailed chemical, mineralogical, and spectroscopic analyses of these soil samples are reported elsewhere. A representative sample of each soil was embedded in low-viscosity epoxy, and thin sections (about 70nm thick) were obtained through ultra microtomy. The thin sections used for these analyses typically contained cross sections of up to 500 individual grains. The thin sections were studied using a JEOL 2010 transmission electron microscope (TEM) equipped with a thin window energy-dispersive X-ray (EDX) spectrometer. An individual thin section was selected from each soil, and for each grain in the section we determined (1) the elemental composition by EDX; (2) whether the grain was crystalline or glassy using electron diffraction and darkfield imaging; (3) the presence or absence of rims and accreted material; and (4) the distribution of nanophase Fe where present. Most of the categories are self-evident; however, we divide the agglutinate derived material into agglutinitic glass (glass with approximately the same composition as the bulk soil that contains nanophase Fe with or without vesicles) and agglutinate fragments, which are composed of crystalline grains and agglutinitic glass. Lithic fragments are defined as polymineralic grains with no glass. Pyroxene grains have been divided into high- and low-Ca groups. As expected, there are a number of differences in the petrography of the <10-microns fractions of 79221 and 71061 given the great difference in their respective maturities, but we focus here on two major distinctions: agglutinate content and the number of grains with micropatina. Slightly over 50% of the particles in 79221 consist of agglutinitic glass and agglutinate fragments, while the remainder are predominantly crystalline mineral grains. The agglutinic glass particles contain abundant nanophase Fe and vesicles. Angular particles are rare, with most showing smooth, rounded exteriors, Of the mineral grains analyzed thus far, over 90% of the grains have amorphous rims that contain nanophase Fe (these rims are believed to have formed by vapor deposition and irradiation effects). The nanophase Fe in these rims probably accounts for a significant fraction of the increase in Is/FeO measured in these size fractions. In addition to the rims, the majority of particles also show abundant accreted material in the form of glass splashes and spherules that also contain nanophase Fe. In stark contrast, the surfaces of the mineral grains in the 71061 sample are relatively prisitine, as only about 14% of the mineral grains in the sample exhibited amorphous rims. Furthermore, the mineral particles are more angular and show greater surface roughness than in the mature sample. Accreted material on particle surfaces is rare. Agglutinitic material is a major component of the 71061 sample; however, nanophase Fe and vesicles are not as well developed as in the 79221 sample. It is now recognized that nanophase Fe is probably the main agent in modifying the optical properties of lunar soil grains. The most important result of this study is the observation that in the fine size fractions of mature soils, nearly every grain has nanophase Fe within 100 run of the particle surface. (Additional Information contained in original)

Estimating carbon and nitrogen pools in a forest soil: Influence of soil bulk density methods and rock content

Treesearch

Martin F. Jurgensen; Deborah S. Page-Dumroese; Robert E. Brown; Joanne M. Tirocke; Chris A. Miller; James B. Pickens; Min Wang

2017-01-01

Soils with high rock content are common in many US forests, and contain large amounts of stored C. Accurate measurements of soil bulk density and rock content are critical for calculating and assessing changes in both C and nutrient pool size, but bulk density sampling methods have limitations and sources of variability. Therefore, we evaluated the use of small-...

Final report: survey and removal of radioactive surface contamination at environmental restoration sites, Sandia National Laboratories/New Mexico. Volume 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lambert, K.A.; Mitchell, M.M.; Jean, D.

1997-09-01

This report contains the Appendices A-L including Voluntary Corrective Measure Plans, Waste Management Plans, Task-Specific Health and Safety Plan, Analytical Laboratory Procedures, Soil Sample Results, In-Situ Gamma Spectroscopy Results, Radionuclide Activity Summary, TCLP Soil Sample Results, Waste Characterization Memoranda, Waste Drum Inventory Data, Radiological Risk Assessment, and Summary of Site-Specific Recommendations.

Role of root exudates in dissolution of Cd containing iron oxides

NASA Astrophysics Data System (ADS)

Rosenfeld, C.; Martinez, C. E.

2011-12-01

Dissolved organic matter (DOM) in the rhizosphere contains organic acids, amino acids and more complex organic molecules that can substantially impact the solubility of soil solid phases. Plant roots and soil microorganisms contribute a large fraction of these organic compounds to DOM, potentially accelerating the transfer of solid phase elements into solution. In highly contaminated soils, heavy metals such as Cd are commonly found coprecipitated with common minerals (e.g. iron oxides). Introducing or changing vegetation on these contaminated soils may increase DOM levels in the soil pore fluids and thus enhance the biological and chemical weathering of soil minerals. Here, we investigate the role of root exudates on mineral dissolution and Cd mobility in contaminated soils. We hypothesize that plant exudates containing nitrogen and sulfur functional groups will dissolve Cd-containing mineral phases to a greater extent than exudates containing only oxygen functional groups, resulting in higher Cd concentrations in solution. Two different iron oxide mineral phases were utilized in a laboratory-scale model study system investigating the effects of low molecular weight, oxygen-, nitrogen-, and sulfur-containing organic compounds on mineral dissolution. Goethite (α-FeOOH) was synthesized in the laboratory with 0, 2.4, 5, and 100 theoretical mol% Cd, and franklinite (ZnFe2O4) was prepared with 0, 10, and 25 theoretical mol% Cd. Phase identity of all minerals was verified with X-ray diffraction (XRD). All minerals were reacted with 0.01 mM solutions containing one of four different organic ligands (oxalic acid, citric acid, histidine or cysteine) and aliquots of these solutions were sampled periodically over 40 days. Results from solution samples suggest that oxalic acid, citric acid, and histidine consistently increase mineral dissolution relative to the control (no organic compound present) while cysteine consistently inhibits dissolution relative to the control in all minerals. Increasing Cd substitution in the franklinite resulted in increased release of Fe and Zn to solution in the presence of these organic compounds, while increasing Cd substitution in the goethite generally limited Fe release to solution. In the case of cysteine, sulfur concentrations in solution decrease over time in the presence of Cd-containing minerals, indicating strong binding of the cysteine compound to the mineral surface, inhibiting Cd dissolution from the minerals. Our work indicates that amino acids present in biological soil exudates, in addition to organic acids, may have substantial impacts on iron oxide dissolution in soils, altering the availability of both bioessential (e.g., Fe and Zn) and non-essential, or potentially toxic, (e.g., Cd) elements.

Anthropic changes to the biotic factor of soil formation from forests to managed grasslands along summits of the western Pyrenees Mountains, France

NASA Astrophysics Data System (ADS)

Leigh, David; Gragson, Theodore

2017-04-01

Mounting evidence indicates that highland pastures of the humid-temperate western Pyrenees were converted from mixed forests to managed grasslands thousands of years ago, as early as during the late Neolithic and Bronze age by human actions including use of fire. We observe pronounced differences between soil profiles of ancient pastures and old-growth forests in otherwise similar landscape positions. In order to test physical and chemical differences, we collected paired samples of forest versus grassland soils at four separate hillslope sites where there was a clear boundary between the two vegetation types. Animal trails were excluded from sampling. Factors of climate, topography, parent material, and time of soil formation were essentially identical in the forests and pastures of each site, but the time of soil under grassland vegetation may have varied. Each paired hillslope site included five core samples (7.6 cm diameter) from the upper 7.6 cm of the mineral soil within each vegetation type, and the A horizon thickness was recorded at each core hole site. In addition, one complete soil profile was sampled in each vegetation type at each site, making a total of 20 core samples and 4 complete profiles from each respective vegetation type. In addition, we measured the magnetic susceptibility of the mineral soil surface on two transects crossing the vegetation boundary. Core samples have been measured for bulk density, pH, plant-available nutrients, and organic matter; and tests for total carbon and nitrogen, amorphous silica, charcoal, and other forms of black carbon are ongoing. Preliminary results indicate pastured A horizons are about three times as thick as forested soils, contain more organic matter, have lower soil bulk densities, have much finer and stronger structural development of soil aggregates. These traits favor much greater infiltration and water holding capacities of the pastured soils, which we have validated with saturated hydraulic conductivity tests. Pedogenically, the pastured soils indicate that melanization processes have been much more pronounced than in the forested soils. Distinct changes in soil materials result from conversion to pasture. Significantly more black carbon (including macro-charcoal) appears to be present in the pastured soils, indicating that it plays an important role in melanization, in addition to long-term sequestration of carbon. Pastured soils contain greater contents of amorphous silica due to more rapid phytolith production from grasses as opposed to trees. Pastures register significantly higher soil magnetic susceptibility than forests, presumably from past use of fire. In essence, anthropic manipulation of the biotic factor of pedogenesis has created new soil materials, processes, and functions. Our current research involves radiocarbon and chronostratigraphy to establish rates of this anthropisation of the biotic factor.

Removal of uranium from soil samples for ICP-OES analysis of RCRA metals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wero, M.; Lederer-Cano, A.; Billy, C.

1995-12-01

Soil samples containing high levels of uranium present unique analytical problems when analyzed for toxic metals (Ag, As, Ba, Cd, Cr, Cu, Ni, Pb, Se and Tl) because of the spectral interference of uranium in the ICP-OES emission spectrometer. Methods to remove uranium from the digestates of soil samples, known to be high in uranium, have been developed that reduce the initial uranium concentration (1-3%) to less than 500 ppm. UTEVA ion exchange columns, used as an ICP-OES analytical pre-treatment, reduces uranium to acceptable levels, permitting good analytical results of the RCRA metals by ICP-OES.

Petrologic variations in Apollo 16 surface soils

NASA Technical Reports Server (NTRS)

Houck, K. J.

1982-01-01

Source rock, maturation history and intrasite variation data are derived for the Apollo 16 regolith by comparing modal analyses of 15 surface soils with rake and rock sample data. Triangular source rock component plots show that Apollo 16 soils have similar source rocks that are well homogenized throughout the site. The site can be divided into three soil petrographic provinces. Central site soils are mature, well homogenized, and enriched in glass. They are probably the most typical Cayley Plains materials present. North Ray soils are immature to submature, containing North Ray ejecta. South Ray soils are mature, but contain small amounts of fresh impact melts and plagioclase, due perhaps to the breakdown of blocky South Ray ejecta. The different compositions and physical properties of North and South Ray ejecta support the hypothesis that the latter event excavated Cayley material, while the former excavated Descartes materials.

Development of a method for detection and quantification of B. brongniartii and B. bassiana in soil

NASA Astrophysics Data System (ADS)

Canfora, L.; Malusà, E.; Tkaczuk, C.; Tartanus, M.; Łabanowska, B. H.; Pinzari, F.

2016-03-01

A culture independent method based on qPCR was developed for the detection and quantification of two fungal inoculants in soil. The aim was to adapt a genotyping approach based on SSR (Simple Sequence Repeat) marker to a discriminating tracing of two different species of bioinoculants in soil, after their in-field release. Two entomopathogenic fungi, Beauveria bassiana and B. brongniartii, were traced and quantified in soil samples obtained from field trials. These two fungal species were used as biological agents in Poland to control Melolontha melolontha (European cockchafer), whose larvae live in soil menacing horticultural crops. Specificity of SSR markers was verified using controls consisting of: i) soil samples containing fungal spores of B. bassiana and B. brongniartii in known dilutions; ii) the DNA of the fungal microorganisms; iii) soil samples singly inoculated with each fungus species. An initial evaluation of the protocol was performed with analyses of soil DNA and mycelial DNA. Further, the simultaneous detection and quantification of B. bassiana and B. brongniartii in soil was achieved in field samples after application of the bio-inoculants. The protocol can be considered as a relatively low cost solution for the detection, identification and traceability of fungal bio-inoculants in soil.

Development of a method for detection and quantification of B. brongniartii and B. bassiana in soil

PubMed Central

Canfora, L.; Malusà, E.; Tkaczuk, C.; Tartanus, M.; Łabanowska, B.H.; Pinzari, F.

2016-01-01

A culture independent method based on qPCR was developed for the detection and quantification of two fungal inoculants in soil. The aim was to adapt a genotyping approach based on SSR (Simple Sequence Repeat) marker to a discriminating tracing of two different species of bioinoculants in soil, after their in-field release. Two entomopathogenic fungi, Beauveria bassiana and B. brongniartii, were traced and quantified in soil samples obtained from field trials. These two fungal species were used as biological agents in Poland to control Melolontha melolontha (European cockchafer), whose larvae live in soil menacing horticultural crops. Specificity of SSR markers was verified using controls consisting of: i) soil samples containing fungal spores of B. bassiana and B. brongniartii in known dilutions; ii) the DNA of the fungal microorganisms; iii) soil samples singly inoculated with each fungus species. An initial evaluation of the protocol was performed with analyses of soil DNA and mycelial DNA. Further, the simultaneous detection and quantification of B. bassiana and B. brongniartii in soil was achieved in field samples after application of the bio-inoculants. The protocol can be considered as a relatively low cost solution for the detection, identification and traceability of fungal bio-inoculants in soil. PMID:26975931

Influence of uranium on bacterial communities: a comparison of natural uranium-rich soils with controls.

PubMed

Mondani, Laure; Benzerara, Karim; Carrière, Marie; Christen, Richard; Mamindy-Pajany, Yannick; Février, Laureline; Marmier, Nicolas; Achouak, Wafa; Nardoux, Pascal; Berthomieu, Catherine; Chapon, Virginie

2011-01-01

This study investigated the influence of uranium on the indigenous bacterial community structure in natural soils with high uranium content. Radioactive soil samples exhibiting 0.26% - 25.5% U in mass were analyzed and compared with nearby control soils containing trace uranium. EXAFS and XRD analyses of soils revealed the presence of U(VI) and uranium-phosphate mineral phases, identified as sabugalite and meta-autunite. A comparative analysis of bacterial community fingerprints using denaturing gradient gel electrophoresis (DGGE) revealed the presence of a complex population in both control and uranium-rich samples. However, bacterial communities inhabiting uraniferous soils exhibited specific fingerprints that were remarkably stable over time, in contrast to populations from nearby control samples. Representatives of Acidobacteria, Proteobacteria, and seven others phyla were detected in DGGE bands specific to uraniferous samples. In particular, sequences related to iron-reducing bacteria such as Geobacter and Geothrix were identified concomitantly with iron-oxidizing species such as Gallionella and Sideroxydans. All together, our results demonstrate that uranium exerts a permanent high pressure on soil bacterial communities and suggest the existence of a uranium redox cycle mediated by bacteria in the soil.

Influence of Uranium on Bacterial Communities: A Comparison of Natural Uranium-Rich Soils with Controls

PubMed Central

Mondani, Laure; Benzerara, Karim; Carrière, Marie; Christen, Richard; Mamindy-Pajany, Yannick; Février, Laureline; Marmier, Nicolas; Achouak, Wafa; Nardoux, Pascal; Berthomieu, Catherine; Chapon, Virginie

2011-01-01

This study investigated the influence of uranium on the indigenous bacterial community structure in natural soils with high uranium content. Radioactive soil samples exhibiting 0.26% - 25.5% U in mass were analyzed and compared with nearby control soils containing trace uranium. EXAFS and XRD analyses of soils revealed the presence of U(VI) and uranium-phosphate mineral phases, identified as sabugalite and meta-autunite. A comparative analysis of bacterial community fingerprints using denaturing gradient gel electrophoresis (DGGE) revealed the presence of a complex population in both control and uranium-rich samples. However, bacterial communities inhabiting uraniferous soils exhibited specific fingerprints that were remarkably stable over time, in contrast to populations from nearby control samples. Representatives of Acidobacteria, Proteobacteria, and seven others phyla were detected in DGGE bands specific to uraniferous samples. In particular, sequences related to iron-reducing bacteria such as Geobacter and Geothrix were identified concomitantly with iron-oxidizing species such as Gallionella and Sideroxydans. All together, our results demonstrate that uranium exerts a permanent high pressure on soil bacterial communities and suggest the existence of a uranium redox cycle mediated by bacteria in the soil. PMID:21998695

Effect of soil and a nonionic surfactant on BTE-oX and MTBE biodegradation kinetics.

PubMed

Acuna-Askar, K; Gracia-Lozano, M V; Villarreal-Chiu, J F; Marmolejo, J G; Garza-Gonzalez, M T; Chavez-Gomez, B

2005-01-01

The biodegradation kinetics of BTE-oX and MTBE, mixed all together, in the presence of 905 mg/L VSS of BTEX-acclimated biomass was evaluated. Effects of soil and Tergitol NP-10 in aqueous samples on substrate biodegradation rates were also evaluated. Biodegradation kinetics was evaluated for 36 hours, every 6 hours. MTBE biodegradation followed a first-order one-phase kinetic model in all samples, whereas benzene, toluene and ethylbenzene biodegradation followed a first-order two-phase kinetic model in all samples. O-xylene biodegradation followed a first-order two-phase kinetic model in the presence of biomass only. Interestingly, o-xylene biodegradation was able to switch to a first-order one-phase kinetic model when either soil or soil and Tergitol NP-10 were added. The presence of soil in aqueous samples retarded benzene, toluene and ethylbenzene removal rates. O-xylene and MTBE removal rates were enhanced by soil. The addition of Tergitol NP-10 to aqueous samples containing soil had a positive effect on substrate removal rate in all samples. Substrate percent removals ranged 77-99.8% for benzene, toluene and ethylbenzene. O-xylene and MTBE percent removals ranged 50.1-65.3% and 9.9-43.0%, respectively.

[Effect of environmental factors on bacterial community structure in petroleum contaminated soil of Karamay oil field].

PubMed

Liang, Jianfang; Yang, Jiangke; Yang, Yang; Chao, Qunfang; Yin, Yalan; Zhao, Yaguan

2016-08-04

This study aimed to study the phylogenetic diversity and community structure of bacteria in petroleum contaminated soils from Karamay oil field, and to analyze the relationship between the community variation and the environment parameters, to provide a reference for bioremediation of petroleum contaminated soils. We collected samples from petroleum contaminated soils in 5 cm, 20 cm and 50 cm depth layers, and measured the environment parameters subsequently. We constructed three 16S rRNA gene clone libraries of these soil samples, and then determined the operation taxonomy units (OTUs) restriction fragment length polymorphism method, and finally sequenced the representative clones of every OUT. The diversity, richness and evenness index of the bacteria communities were calculated by using Biodap software. Neighbor-Joining phylogenetic tree was constructed based on 16S rRNA gene sequences of bacteria from Karamay oil field and the references from related environments. Canonial correspondence analysis (CCA) was used to analyze the relationship between environment parameters and species by using CANOCO 4.5 software. Environment parameters showed that 50 cm deep soil contained the highest amount of total nitrogen (TN) and total phosphorus (TP), whereas the 20 cm depth soil contained the lowest amount. The 5 cm depth soil contained the highest amount of total organic carbon (TOC), whereas the 50 cm depth soil contained the lowest amount. Among the 3 layers, 20 cm depth had the highest diversity and richness of bacteria, whereas the bacteria in 50 cm depth was the lowest. Phylogenic analyses suggested that the bacteria in Karamay oil field could be distributed into five groups at the level of phylum, Cluster I to V, respectively belong to Proteobacteria, Actinobacteria, Firmicute, Bacteroidetes, Planctomycetes. Cluster I accounts for 78.57% of all tested communities. CCA results showed that TN, TP, TOC significantly affected the bacteria community structure. Especially, TOC content is significantly related to the distribution of Pseudomonas. The petroleum-contaminated soil inhabited abundant of bacteria. The diversity index and spatial distribution of these communities were affected by the environment parameters in the soil.

Treatability Test Report for Application of In Situ Vitrification Technology to Pesticide-, Arsenic-, and Mercury-Contaminated Soils from the M-1 Ponds Site of Rocky Mountain Arsenal, Colorado

DTIC Science & Technology

1989-08-31

residual product; 3] the processing characteristics of the soil and sludge, and 4] the response of the adjacent scil to the treatment. Attainment of...waste after the completion of the test. EF Sample Composite Procedure The fcllov.wng p-ccedure shculd be followed when sample compositing of scils is...mring’ cowi. The scil shCuld be removed from its original sample container Thrcugh the use cf a dioposable wooden tongue depressor. Each sample should

Polycyclic aromatic hydrocarbon (PAH)-containing soils from coal gangue stacking areas contribute to epithelial to mesenchymal transition (EMT) modulation on cancer cell metastasis.

PubMed

Yun, Yang; Gao, Rui; Yue, Huifeng; Liu, Xiaofang; Li, Guangke; Sang, Nan

2017-02-15

The total accumulative stockpiles of gangue in China comprise 4.5billion metric tons, and approximately 659million tons of additional gangue are generated per year. Considering the stacking characteristics are highly heterogeneous, the potential cancer risks from the presence of polycyclic aromatic hydrocarbons (PAHs) remain elusive. This study aimed to determine whether PAH-containing soil around coal gangue stacking areas poses a potential cancer risk and contributes to cancer cell metastasis. The results indicate that eighteen PAHs, primarily originated from coal gangue, exhibited distance variations from the coal gangues to the downstream villages, and the abandoned colliery posed increased potential carcinogenic risks for humans as a result of long-term stacking of coal gangue. Furthermore, soil samples stimulated HepG2 cell migration and invasion in a PAH-dependent manner, and the action was involved in PPARγ-mediated epithelial to mesenchymal transition (EMT) modulation. These findings highlight the potential cancer risk of PAH-containing soil samples around coal gangue stacking areas, and identify important biomarkers underlying the risk and targets preventing the outcomes in polluted areas. Copyright © 2016 Elsevier B.V. All rights reserved.

Long-term ecological effects of exposure to uranium

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hanson, W.C.; Miera, F.R. Jr.

1976-03-01

The consequences of releasing natural and depleted uranium to terrestrial ecosystems during development and testing of depleted uranium munitions were investigated. At Eglin Air Force Base, Florida, soil at various distances from armor plate target butts struck by depleted uranium penetrators was sampled. The upper 5 cm of soil at the target bases contained an average of 800 ppM of depleted uranium, about 30 times as much as soil at 5- to 10-cm depth, indicating some vertical movement of depleted uranium. Samples collected beyond about 20 m from the targets showed near-background natural uranium levels, about 1.3 +- 0.3 ..mu..g/gmore » or ppM. Two explosives-testing areas at the Los Alamos Scientific Laboratory (LASL) were selected because of their use history. E-F Site soil averaged 2400 ppM of uranium in the upper 5 cm and 1600 ppM at 5-10 cm. Lower Slobovia Site soil from two subplots averaged about 2.5 and 0.6 percent of the E-F Site concentrations. Important uranium concentration differences with depth and distance from detonation points were ascribed to the different explosive tests conducted in each area. E-F Site vegetation samples contained about 320 ppM of uranium in November 1974 and about 125 ppM in June 1975. Small mammals trapped in the study areas in November contained a maximum of 210 ppM of uranium in the gastrointestinal tract contents, 24 ppM in the pelt, and 4 ppM in the remaining carcass. In June, maximum concentrations were 110, 50, and 2 ppM in similar samples and 6 ppM in lungs. These data emphasized the importance of resuspension of respirable particles in the upper few millimeters of soil as a contamination mechanism for several components of the LASL ecosystem.« less

Effects of combined lime and fly ash stabilization on the elastic moduli of montmorillonitic soils : final report.

DOT National Transportation Integrated Search

1988-04-01

A laboratory study using bentonite to simulate the montmorillonite component of soils common to Louisiana was undertaken to evaluate the effects of combined lime and fly ash additions on stabilization reactions. Samples containing bentonite (75 weigh...

NHEXAS PHASE I ARIZONA STUDY--QA ANALYTICAL RESULTS FOR METALS IN REPLICATE SAMPLES

EPA Science Inventory

The Metals in Replicate Samples data set contains the analytical results of measurements of up to 27 metals in 133 replicate (duplicate) samples from 62 households. Measurements were made in samples of soil, blood, tap water, and drinking water. Duplicate samples for a small pe...

Astronaut Alan Bean holds Special Environmental Sample Container

NASA Technical Reports Server (NTRS)

1969-01-01

Astronaut Alan L. Bean, lunar module pilot for the Apollo 12 lunar landing mission, holds a Special Environmental Sample Container filled with lunar soil collected during the extravehicular activity (EVA) in which Astronauts Charles Conrad Jr., commander, and Bean participated. Connrad, who took this picture, is reflected in the helmet visor of the lunar module pilot.

[Effects of long-term application of pig manure containing residual tetracycline on the formation of drug-resistant bacteria and resistance genes].

PubMed

Zhang, Jun; Yang, Xiao-Hong; Ge, Feng; Wang, Na; Jiao, Shao-Jun; Jiao, Shao-Jun

2014-06-01

The effect of residual veterinary tetracycline on the formation of drug-resistant bacteria and corresponding resistance genes was investigated. During the research, the soil with long-term application of pig manure containing residual tetracycline was collected in autumn and summer respectively in the farmland around a certain pig farm in Shuyang City, Huang Huai area, north of Jiangsu province. At the same time, soils without application of pig manure in the farmland of this area were collected as the reference sample. Composition of drug-resistant bacteria in all soil samples was analyzed and three common tetracycline-resistance genes (tetA, tetC, tetE) were studied by PCR as well. During the research, 59 drug-resistant bacteria belonging to 13 bacterial genus respectively were separated from the soil sample collected in autumn while 35 drug- resistant bacteria belonging to 10 bacterial genus respectively were separated from the soil sample collected in summer and as for the reference sample, 3 drug-resistant bacteria belonging to 1 bacterial genus (Streptomyces) were separated with pathogenic bacteria up to 38.14% of total drug-resistant bacteria. PCR result showed that resistance genes were detected in all drug-resistant bacteria and tetC accounted for the most. At the same time, the residual tetracycline in the soil which was in a range of 41.1-61.9 microg x kg(-1) correlated with the amount of resistance genes (4.63 x 10(5)-37.42 x 10(5) copies x g(-1)). Besides, the climate was found accelerating the formation of drug-resistant bacteria and resistance genes.

Field Sampling Plan/Quality Assurance Project Plan Volume I of III

EPA Pesticide Factsheets

This document contains procedures related to the collection and analysis of soil, sediment, groundwater, surface water, air and biota samples at GE’s Pittsfield, Massachusetts facility and at other areas.

Chemotactic selection of pollutant degrading soil bacteria

DOEpatents

Hazen, Terry C.

1994-01-01

A method for identifying soil microbial strains which may be bacterial degraders of pollutants comprising the steps of placing a concentration of a pollutant in a substantially closed container, placing the container in a sample of soil for a period of time ranging from one minute to several hours, retrieving the container, collecting the contents of the container, and microscopically determining the identity of the bacteria present. Different concentrations of the pollutant can be used to determine which bacteria respond to each concentration. The method can be used for characterizing a polluted site or for looking for naturally occurring biological degraders of the pollutant. Then bacteria identified as degraders of the pollutant and as chemotactically attracted to the pollutant are used to inoculate contaminated soil. To enhance the effect of the bacteria on the pollutant, nutrients are cyclicly provided to the bacteria then withheld to alternately build up the size of the bacterial colony or community and then allow it to degrade the pollutant.

Soil Data from a Moderately Well and Somewhat Poorly Drained Fire Chronosequence near Thompson, Manitoba, Canada

USGS Publications Warehouse

Manies, K.L.; Harden, J.W.; Veldhuis, Hugo; Trumbore, Sue

2006-01-01

The U.S. Geological Survey project Fate of Carbon in Alaskan Landscapes (FOCAL) is studying the effect of fire and soil drainage on soil carbon storage in the boreal forest. As such this group was invited to be a part of a NSF-funded project (Fire, Ecosystem and Succession - Experiment Boreal or FIRES-ExB) to study the carbon balance of sites that varied in age (time since fire) and soil drainage in the Thompson, Manitoba, Canada region. This report describes the location of our FIRES-ExB sampling sites as well as the procedures used to describe, sample, and analyze the soils. This report also contains data tables with sample related information including, but not limited to, field descriptions, bulk density, particle size distribution, moisture content, carbon (C) concentration, nitrogen (N) concentration, isotopic data for C, and major, minor and trace elemental concentration.

NHEXAS PHASE I MARYLAND STUDY--QA ANALYTICAL RESULTS FOR PESTICIDES IN REPLICATE SAMPLES

EPA Science Inventory

The Pesticides in Replicates data set contains the analytical results of measurements of up to 10 pesticides in 68 replicate (duplicate) samples from 41 households. Measurements were made in samples of indoor air, dust, soil, drinking water, food, and beverages. Duplicate sampl...

Evaluation of carbon and nitrogen pools in different soil types amended with different organic inputs by thermogravimetric/calorimetric analysis

NASA Astrophysics Data System (ADS)

Yanardaǧ, Ibrahim H.; Zornoza, Raúl; Büyükkiliç-Yanardaǧ, Asuman; Acosta, Jose A.; Faz, Ángel; Mermut, Ahmet R.

2017-04-01

The objective of this study was to assess the short-term changes in soil organic C (SOC) and N pools after incubation of three different soil types (Regosol, Luvisol and Kastanozem) treated with three amendments differing in organic matter stability (raw pig slurry (PS), manure, and biochar (BC), and to establish relationships between different chemical, spectral and thermal/calorimetric data to assess if thermal/calorimetric analysis could replace conventional analyses to monitor changes in SOC and N poos. Thermogravimetry-Differential Scanning Calorimetry (TG-DSC) analysis showed that amendments had little effect on volatile SOC and inorganic matter, compared to unamended samples in all soils. All amendments significantly increased the labile SOC in Regosol. Manure and BC increased recalcitrant SOC in Regosol and Luvisol. BC significantly increased recalcitrant SOC in all soils. Refractory SOC slightly increased with amendments in the Luvisol compared to the control. These results support the findings obtained with chemical analyses. Selected evolved ions (m/z 30 and 44) detected by quadrupole mass spectrometry (QMS) confirmed findings from TG-DSC. Emissions of C and N containing gases from the Regosol significantly increased with the amendments because this soil contains low SOC content, and the application of these amendments provided additional C. An increase in the CO2 containing gas species (m/z 44) from volatile SOC was observed with PS application only in the Regosol. Carbon dioxide increments (m/z 44) from recalcitrant (380-475°C) and refractory (475-550/600°C) SOC pools were observed with all amendments in all soils especially with BC application. The evolved ions at m/z 44 were higher in the initial soil samples from Kastanozem than after incubation, suggesting a loss of organic compounds, mainly volatile and labile upon incubation. NO peaks (m/z 30) showed similar trends to the C containing gas species in all soils. We carried out linear regressions to estimate soil properties measured by conventional chemical procedures by the use of TG-DSC-QMS. We obtained accurate models to estimate SOC, soil carbonates, recalcitrant C, soluble C and soluble N. These results encourage the use of thermal analyses to study SOM dynamics in soils, since it provides feasible and accurate information about different organic and inorganic C and N fractions. Thermal methods are quite inexpensive, require little sample preparation, are rapid and give reproducible results. However, no relationship between thermal analyses and C and N mineralization and N volatilization was found, suggesting that this technique may be valid to assess the current value of different organic fractions in a soil in a concrete time, but not indicated to predict mineralization or volatilization trends after application of amendments.

A heterogeneous boron distribution in soil influences the poplar root system architecture development

NASA Astrophysics Data System (ADS)

Rees, R.; Robinson, B. H.; Hartmann, S.; Lehmann, E.; Schulin, R.

2009-04-01

Poplars are well suited for the phytomanagement of boron (B)-contaminated sites, due to their high transpiration rate and tolerance to elevated soil B concentrations. However, the uptake and the fate of B in poplar stands are not well understood. This information is crucial to improve the design of phytomanagement systems, where the primary role of poplars is to reduce B leaching by reducing the water flux through the contaminated material. Like other trace elements, B occurs heterogeneously in soils. Concentrations can differ up to an order of magnitude within centimetres. These gradients affect plant root growth and thus via preferential flow along the roots water and mass transport in soils to ground and surface waters. Generally there are three possible reactions of plant roots to patches with elevated trace element concentrations in soils: indifference, avoidance, or foraging. While avoidance or indifference might seem to be the most obvious strategies, foraging cannot be excluded a priori, because of the high demand of poplars for B compared to other tree species. We aimed to determine the rooting strategies of poplars in soils where B is either homo- or heterogeneously distributed. We planted 5 cm cuttings of Populus tremula var. Birmensdorf clones in aluminum (Al) containers with internal dimensions of 64 x 67 x 1.2 cm. The soil used was subsoil from northern Switzerland with a naturally low B and organic C concentration. We setup two treatments and a control with three replicates each. We spiked a bigger and a smaller portion of the soil with the same amount of B(OH)3-salt, in order to obtain soil concentrations of 7.5 mg B kg-1 and 20 mg B kg-1. We filled the containers with (a) un-spiked soil, (b) the 7.5 mg B kg-1 soil and (c) heterogeneously. The heterogeneous treatment consisted of one third 20 mg B kg-1 soil and two thirds control soil. We grew the poplars in a small greenhouse over 2 months and from then on in a climate chamber for another 3 months. We irrigated the poplars with modified Hoagland's solution that contained no B. We imaged the roots in the soil every 3rd week using neutron radiography (NR) at the Paul-Scherrer Institute. Living roots can be visualised in soil by NR because of their higher water content compared to the surrounding soil. At the end of the growing period, the Al containers were opened and the soil surface was scanned by a standard office scanner. The soil in the containers was divided into nine equal portions representing different depths and spiked or un-spiked regions in soil profile. We separated roots and soil as well as the aerial parts (stems and leaves). We obtained data on root morphological parameters like root length and root density by evaluating scans of the washed root samples with an image evaluation software. All soil and plant samples were dried, weighed and analyzed for B and mineral nutrients using ICP-OES. Plant vitality parameters like water use, growth and number of living leaves did not show any reaction to the treatments. The oldest poplar leaves from poplars in the B-spiked treatments showed signs of light to serious necrosis. From the neutron radiographs it was apparent that poplar roots reached the walls of the Al- containers during the experiment. Primary roots grew at first strongly in lengths in horizontal as well as in vertical direction and only after this lateral root growth was visible. Although the filling and packing of the containers was done with great care to establish an ideally homogeneous soil profile settlement occurred in some containers resulting in gaps in the profile. However, roots growth did not seem to be deranged since roots simply crossed these gaps and continued growth in the adjacent soil patch. The complete results will be available at the time of the conference.

The influence comparing of activated biochar and conventional biochar on the soil biological properties

NASA Astrophysics Data System (ADS)

Dvořáčková, Helena; Mykajlo, Irina; Záhora, Jaroslav

2016-04-01

In our experiment we have used biochar. This material is the product of the pyrolysis that has shown a positive effect on numerous physical and chemical soil properties. However, its influence on the biological component of the soil is very variable. A number of toxic substances that inhibit the soil productivity may be produced during pyrolysis process. The experiment dealt with the hypothesis concerning biochar toxicity reduction by simulating natural processes in the soil. Biochar has been exposed to aeration in the aquatic environment, enriched with nutrients and a source of native soil microflora. It has been created 6 variants in total, each with four replications. The soils samples have been placed in a phytotron for 90 days. Variants consisted of the soil with fertilizers adding (compost, biochar, activated biochar) and have been prepared as well as variants containing compost and biochar and activated biochar optionally. The highest aboveground biomass production has been estimated in variants containing compost, while the lowest production - in the variants containing conventional biochar. During production comparing of the variants with the conventional biochar, activated biochar and control samples it has been evident that activated biochar promotes plant growth, and in contradiction conventional biochar inhibits it. We will approach to the same conclusions when comparing variants with a combination of conventional biochar + compost and activated biochar + compost. Mineral nitrogen leaching has been another investigated parameter. The highest leaching has occurred in the control variant, while the lowest - in the variant with activated biochar (the leaching of nitrate nitrogen has been negligeable). Our results suggest that activated biochar has the potential; however, it is necessary to carry out similar experiments in the field conditions.

Lease Operations Environmental Guidance Document

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bureau of Land Management

This report contains discussions in nine different areas as follows: (1) Good Lease Operating Practices; (2) Site Assessment and Sampling; (3) Spills/Accidents; (4) Containment and Disposal of Produced Waters; (5) Restoration of Hydrocarbon Impacted Soils; (6) Restoration of Salt Impacted Soils; (7) Pit Closures; (8) Identification, Removal and Disposal of Naturally Occurring Radioactive Materials (NORM); and (9) Site Closure and Construction Methods for Abandonment Wells/Locations. This report is primary directed towards the operation of oil and gas producing wells.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strayer, R.F.; Edwards, N.T.; Walton, B.T.

Contaminated soil samples collected from the site of a coal liquefaction product spill were used to study potential fates and effects of this synthetic fuel. Simulated weathering in the laboratory caused significant changes in residual oil composition. Soil column leachates contained high phenol levels that decreased exponentially over time. Toxicity tests demonstrated that the oil-contaminated soil was phytotoxic and caused embryotoxic and teratogenic effects on eggs of the cricket Acheta domesticus.

Neonicotinoid Insecticide Residues in Surface Water and Soil Associated with Commercial Maize (Corn) Fields in Southwestern Ontario

PubMed Central

Schaafsma, Arthur; Limay-Rios, Victor; Baute, Tracey; Smith, Jocelyn; Xue, Yingen

2015-01-01

Neonicotinoid insecticides have come under scrutiny for their potential unintended effects on non-target organisms, particularly pollinators in agro-ecosystems. As part of a larger study of neonicotinoid residues associated with maize (corn) production, 76 water samples within or around the perimeter of 18 commercial maize fields and neighbouring apiaries were collected in 5 maize-producing counties of southwestern Ontario. Residues of clothianidin (mean = 2.28, max. = 43.60 ng/mL) and thiamethoxam (mean = 1.12, max. = 16.50 ng/mL) were detected in 100 and 98.7% of the water samples tested, respectively. The concentration of total neonicotinoid residues in water within maize fields increased six-fold during the first five weeks after planting, and returned to pre-plant levels seven weeks after planting. However, concentrations in water sampled from outside the fields were similar throughout the sampling period. Soil samples from the top 5 cm of the soil profile were also collected in these fields before and immediately following planting. The mean total neonicotinoid residue was 4.02 (range 0.07 to 20.30) ng/g, for samples taken before planting, and 9.94 (range 0.53 to 38.98) ng/g, for those taken immediately after planting. Two soil samples collected from within an conservation area contained detectable (0.03 and 0.11 ng/g) concentrations of clothianidin. Of three drifted snow samples taken, the drift stratum containing the most wind-scoured soil had 0.16 and 0.20 ng/mL mainly clothianidin in the melted snow. The concentration was at the limit of detection (0.02 ng/mL) taken across the entire vertical profile. With the exception of one sample, water samples tested had concentrations below those reported to have acute, chronic or sublethal effects to honey bees. Our results suggest that neonicotinoids may move off-target by wind erosion of contaminated soil. These results are informative to risk assessment models for other non-target species in maize agro-ecosytems. PMID:25710560

Community-level physiological profiles of microorganisms inhabiting soil contaminated with heavy metals

NASA Astrophysics Data System (ADS)

Kuźniar, Agnieszka; Banach, Artur; Stępniewska, Zofia; Frąc, Magdalena; Oszust, Karolina; Gryta, Agata; Kłos, Marta; Wolińska, Agnieszka

2018-01-01

The aim of the study was to assess the differences in the bacterial community physiological profiles in soils contaminated with heavy metals versus soils without metal contaminations. The study's contaminated soil originated from the surrounding area of the Szopienice non-ferrous metal smelter (Silesia Region, Poland). The control was soil unexposed to heavy metals. Metal concentration was appraised by flame atomic absorption spectrometry, whereas the the community-level physiological profile was determined with the Biolog EcoPlatesTM system. The soil microbiological activity in both sites was also assessed via dehydrogenase activity. The mean concentrations of metals (Cd and Zn) in contaminated soil samples were in a range from 147.27 to 12265.42 mg kg-1, and the heavy metal contamination brought about a situation where dehydrogenase activity inhibition was observed mostly in the soil surface layers. Our results demonstrated that there is diversity in the physiological profiles of microorganisms inhabiting contaminated and colntrol soils; therefore, for assessment purposes, these were treated as two clusters. Cluster I included colntrol soil samples in which microbial communities utilised most of the available substrates. Cluster II incorporated contaminated soil samples in which a smaller number of the tested substrates was utilised by the contained microorganisms. The physiological profiles of micro-organisms inhabiting the contaminated and the colntrol soils are distinctly different.

Impacts of road salts on leaching behavior of lead contaminated soil.

PubMed

Wu, Jingjing; Kim, Hwidong

2017-02-15

Research was conducted to explore the effects of road salts on lead leaching from lead contaminated soil samples that were collected in an old residence area in Erie, PA. The synthetic precipitate leaching procedure (SPLP) test was employed to evaluate lead leaching from one of the lead contaminated soils in the presence of various levels of road salts (5%, 10%, 20%, 30% and 40%). The results of the leaching test showed that lead leaching dramatically increased as the road salt content increased as a result of the formation of lead-chloride complexes, but different lead leaching patterns were observed in the presence of NaCl- and CaCl 2 -based road salts at a high content of road salts (>20%). Additional leaching tests that include 30% road salts and different soil samples showed a variety of leaching patterns by soil samples. The sequential extraction of each soil sample showed that a high fraction of organic matter bound lead was associated with lead contamination. The higher the fraction of organic matter bound lead contained in soil, the greater the effects of calcium on reducing lead leaching, observations showed. Copyright © 2016 Elsevier B.V. All rights reserved.

The analysis of soil cores polluted with certain metals using the Box-Cox transformation.

PubMed

Meloun, Milan; Sánka, Milan; Nemec, Pavel; Krítková, Sona; Kupka, Karel

2005-09-01

To define the soil properties for a given area or country including the level of pollution, soil survey and inventory programs are essential tools. Soil data transformations enable the expression of the original data on a new scale, more suitable for data analysis. In the computer-aided interactive analysis of large data files of soil characteristics containing outliers, the diagnostic plots of the exploratory data analysis (EDA) often find that the sample distribution is systematically skewed or reject sample homogeneity. Under such circumstances the original data should be transformed. The Box-Cox transformation improves sample symmetry and stabilizes spread. The logarithmic plot of a profile likelihood function enables the optimum transformation parameter to be found. Here, a proposed procedure for data transformation in univariate data analysis is illustrated on a determination of cadmium content in the plough zone of agricultural soils. A typical soil pollution survey concerns the determination of the elements Be (16 544 values available), Cd (40 317 values), Co (22 176 values), Cr (40 318 values), Hg (32 344 values), Ni (34 989 values), Pb (40 344 values), V (20 373 values) and Zn (36 123 values) in large samples.

Exposure of school children to polycyclic aromatic hydrocarbons, heavy metals and radionuclides in the urban soil of Kragujevac city, Central Serbia.

PubMed

Stajic, J M; Milenkovic, B; Pucarevic, M; Stojic, N; Vasiljevic, I; Nikezic, D

2016-03-01

The concentrations of radionuclides, polycyclic aromatic hydrocarbons (PAHs) and heavy metals were measured in soil samples collected from school backyards and playgrounds in Kragujevac, one of the largest cities of Central Serbia. The activity concentrations of (226)Ra, (232)Th, (40)K and (137)Cs were determined using the HPGe semiconductor detector. The average values were 34.6, 44.7, 428.9 and 45.1 Bq kg(-1), respectively. The correlation between the activity concentrations of (226)Ra in the soil samples and the results of the previous measurement of (222)Rn concentrations in the indoor air was examined. The absorbed dose rates, the annual effective doses and excess lifetime cancer risk were also estimated. The activity concentrations of (226)Ra and (232)Th have shown normal distribution. The collected soil samples were analysed for PAHs by HPLC. All analysed soil samples contained PAHs, and their total amounts (for 15 measured compounds) were found to be between 0.038 and 3.136 mg kg(-1) of absolutely dry soil (a.d.s). In addition the concentrations of As, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb and Zn were measured in the fourteen soil samples collected from the playgrounds of kindergartens. Copyright © 2015 Elsevier Ltd. All rights reserved.

Soil Components in Heterogeneous Impact Glass in Martian Meteorite EETA79001

NASA Technical Reports Server (NTRS)

Schrader, C. M.; Cohen, B. A.; Donovan, J. J.; Vicenzi, E. P.

2010-01-01

Martian soil composition can illuminate past and ongoing near-surface processes such as impact gardening [2] and hydrothermal and volcanic activity [3,4]. Though the Mars Exploration Rovers (MER) have analyzed the major-element composition of Martian soils, no soil samples have been returned to Earth for detailed chemical analysis. Rao et al. [1] suggested that Martian meteorite EETA79001 contains melted Martian soil in its impact glass (Lithology C) based on sulfur enrichment of Lithology C relative to the meteorite s basaltic lithologies (A and B) [1,2]. If true, it may be possible to extract detailed soil chemical analyses using this meteoritic sample. We conducted high-resolution (0.3 m/pixel) element mapping of Lithology C in thin section EETA79001,18 by energy dispersive spectrometry (EDS). We use these data for principal component analysis (PCA).

Fate and transport of the ß-adrenergic agonist ractopamine hydrochloride in soil-water systems

USDA-ARS?s Scientific Manuscript database

The feed additive ractopamine hydrochloride was fortified at four concentrations into batch vials containing soils that differed in both biological activity and organic matter (OM). Sampling of the liquid layer for 14 d demonstrated that ractopamine rapidly dissipated from the liquid layer. Less t...

Factors affecting temporal and spatial soil moisture variation in and adjacent to group selection openings

Treesearch

W.H. McNab

1991-01-01

Soil moisture content was intensively sampled in three, 1-acre blocks containing an opening and surrounding mature upland hardwoods. Openings covering 0.19-0.26 ac were created by group-selection cutting, and they were occupied by 1-year-old trees and shrubs.

Response of soil microorganisms to radioactive oil waste: results from a leaching experiment

NASA Astrophysics Data System (ADS)

Galitskaya, P.; Biktasheva, L.; Saveliev, A.; Ratering, S.; Schnell, S.; Selivanovskaya, S.

2015-01-01

Oil wastes produced in large amounts in the processes of oil extraction, refining, and transportation are of great environmental concern because of their mutagenicity, toxicity, high fire hazardousness, and other properties. About 40% of these wastes contain radionuclides; however, the effects of oil products and radionuclides on soil microorganisms are frequently studied separately. The toxicity and effects on various microbial parameters of raw waste (H) containing 575 g of total petroleum hydrocarbons (TPH) kg-1 waste, 4.4 kBq kg-1 of 226Ra, 2.8 kBq kg-1 of 232Th, and 1.3 kBq kg-1 of 40K and its treated variant (R) (1.6 g kg-1 of TPH, 7.9 kBq kg-1 of 226Ra, 3.9 kBq kg-1 of 232Th, and 183 kBq kg-1 of 40K) were estimated in a leaching column experiment to separate the effects of hydrocarbons from those of radioactive elements. The disposal of H waste samples on the soil surface led to an increase of the TPH content in soil: it became 3.5, 2.8, and 2.2 times higher in the upper (0-20 cm), middle (20-40 cm), and lower (40-60 cm) layers respectively. Activity concentrations of 226Ra and 232Th increased in soil sampled from both H- and R-columns in comparison to their concentrations in control soil. The activity concentrations of these two elements in samples taken from the upper and middle layers were much higher for the R-column compared to the H-column, despite the fact that the amount of waste added to the columns was equalized with respect to the activity concentrations of radionuclides. The H waste containing both TPH and radionuclides affected the functioning of the soil microbial community, and the effect was more pronounced in the upper layer of the column. Metabolic quotient and cellulase activity were the most sensitive microbial parameters as their levels were changed 5-1.4 times in comparison to control ones. Changes of soil functional characteristics caused by the treated waste containing mainly radionuclides were not observed. PCR-SSCP (polymerase chain reaction - single strand conformation polymorphism) analysis followed by MDS (metric multidimensional scaling) and clustering analysis revealed that the shifts in microbial community structure were affected by both hydrocarbons and radioactivity.

Antibiotic resistance of microorganisms in agricultural soils in Russia

NASA Astrophysics Data System (ADS)

Danilova, Natasha; Galitskaya, Polina; Selivanovskaya, Svetlana

2017-04-01

Antibiotics are medicines widely used to treat and prevent bacterial infections not only in human medicine but also in veterinary. Besides, in animal husbandry antibiotics are often used in for stimulation of animal's growth. Many antibiotics used for veterinary purposes are weakly absorbed in the animal's gut. So up to 90% of the administered antibiotics are excreted with manure and urine. Therefore use of manure as an organic fertilizer leads to formation and spreading of antibiotic resistance among soil microbes. Another reason of such spreading is the horizontal transfer of genes encoding antibiotic resistance from manure to soil microflora. The level of antibiotic resistance genes pollution of soils has not been properly studied yet. The aim of this study was to estimate the contamination of agricultural soils by antibiotic resistant genes. 30 samples of agricultural soils were selected around of Kazan city (Tatarstan Republic) with 1.3 Mio citizens. Since tetracycline is reported to be the most wide spread veterinary antibiotic in Russia, we estimated the level of soil contamination by tet(X) gene encoding tetracycline decomposition in microbial cell. Real time PCR method with specific primers was used as a method of investigation. Particle size type distribution of 31% of soil samples was estimated to be sandy clay, and 69% of soil samples - to silty clay. Content of dissoluble organic carbon ranged from 0,02 mg g -1 (sample 20) to 0,46 mg g -1 (sample 16). Respiration activity and microbial biomass of soils were estimated to be 0,80-5,28 CO2 C mg g -1 h-1 and 263,51-935,77 µg kg - 1 respectively. The values presented are typical for soils of Tatarstan Republic. In terms of the antibiotic resistant gene content, 27 of 30 samples investigated contained tet(X) gene, while 52% of the samples were highly contaminated, 34% of samples were middle contaminated and 14% of samples - weakly contaminated.

Roundup Ready soybean gene concentrations in field soil aggregate size classes.

PubMed

Levy-Booth, David J; Gulden, Robert H; Campbell, Rachel G; Powell, Jeff R; Klironomos, John N; Pauls, K Peter; Swanton, Clarence J; Trevors, Jack T; Dunfield, Kari E

2009-02-01

Roundup Ready (RR) soybeans containing recombinant Agrobacterium spp. CP4 5-enol-pyruvyl-shikimate-3-phosphate synthase (cp4 epsps) genes tolerant to the herbicide glyphosate are extensively grown worldwide. The concentration of recombinant DNA from RR soybeans in soil aggregates was studied due to the possibility of genetic transformation of soil bacteria. This study used real-time PCR to examine the concentration of cp4 epsps in four field soil aggregate size classes (>2000 microm, 2000-500 microm, 500-250 microm and <250 microm). Aggregates over 2000 microm in diameter had significantly greater gene concentrations than those with diameters under 2000 microm. The >2000 mum fraction contained between 66.62% and 99.18% of total gene copies, although it only accounted for about 30.00% of the sampled soil. Aggregate formation may facilitate persistence of recombinant DNA.

Interaction of Benzo(a)pyrene with the natural organic matter of soil using three-dimensional (3-D) fluorescence spectroscopy with Parallel Factor Analysis

NASA Astrophysics Data System (ADS)

El Fallah, Rawa

2017-04-01

Benzo(a)pyrene (BaP) is a polycyclic aromatic hydrocarbon arising mainly from the incomplete combustion of organic material. It is toxic and has mutagenic and carcinogenic properties. It is classified as a priority pollutant by The United States Environmental Protection Agency (US-EPA). After it's emission in the atmosphere, and due to its physico-chemical properties, BaP will be deposited in the soil. Its aromaticity gives it the capacity to be studied by fluorescence spectroscopy so that of the Natural Organic Matter (NOM). In this study we used fluorescence excitation-emission-matrix (FEEM) with Parallel Factor analysis (PARAFAC) to study the interaction between NOM of soil and BaP. Soil sample was treated with Tetrasodium pyrophosphate along with Sodium hydroxide to obtain the Humic Substances, which afterwards were physically fractioned under acidic pH into solid Humic Acid and liquid Fulvic Acid. Three concentrations of BaP solution were added to each soil fraction. We compared the results of PARAFAC analysis of the samples containing BaP and the original NOM fractions. In the samples containing BaP, four fluorophores (components) were found, the fourth identified as BaP. Out of the three other fluorophores characteristic of NOM, two were found similar in all NOM fractions whereas only one fluorophore had some variations in its spectral characteristics. The presence of BaP changed the fluorescence of NOM. These modifications were depending on the type of soil fraction.

PIXE analysis of sand and soil from Ulaanbaatar and Karakurum, Mongolia

NASA Astrophysics Data System (ADS)

Markwitz, A.; Barry, B.; Shagjjamba, D.

2008-09-01

Twenty-one sand and soil samples were collected at the surface from 22 to 25 June 2007 at sampling sites from Ulaanbaatar to Karakurum, Mongolia. The sand samples were collected from constantly changing sand dunes which may still contain salt from prehistoric oceans. The dry sand and soil samples were processed for PIXE and PIGE analyses. A clear division between soils and sand become apparent in the silicon results. Concentrations of all bulk elements in human habitation samples and of Si, Al, K and Fe in dry lake/flood plain samples are similar to those in the soils and sands. Among elements which could be regarded as being at trace concentrations the average S concentration in the soils is 0.9 g kg-1 whereas it is not detected in the sand samples. Zinc and Cu concentrations are both higher in the soils than the sands and are strongly correlated. A surprising presence of uranium at a concentration of 350 mg kg-1 was detected in the PIXE measurement on one of the dry lake samples. Gamma spectrometry confirmed the presence of U in this sample and also at a lower level in a sample from the lake shore, but in none of the other samples. Further, the gamma spectrometry showed that 238U decay products were present only at a level corresponding to about 3 mg kg-1 U for a system in radioactive equilibrium, a figure which is typical for U in the earth's crust. Disequilibria between 238U and its decay products occur naturally but such a high degree of separation at high concentration would be unique if confirmed. PIXE and PIGE measurements of these samples highlight the difficulty in correlating trace element measurements with occurrence of indicators of sea salt in air particulate samples.

The Moon Beams on Westlake.

ERIC Educational Resources Information Center

Bishop, Jeanne E.

1979-01-01

Presented is a community's experience with a lunar sample education kit containing actual pieces of moon rocks and soil on loan from NASA. School and community activities including mini-labs, seminars, and lunar sample viewing sessions, are described. (SA)

Mercury concentrations and distribution in soil, water, mine waste leachates, and air in and around mercury mines in the Big Bend region, Texas, USA.

PubMed

Gray, John E; Theodorakos, Peter M; Fey, David L; Krabbenhoft, David P

2015-02-01

Samples of soil, water, mine waste leachates, soil gas, and air were collected from areas mined for mercury (Hg) and baseline sites in the Big Bend area, Texas, to evaluate potential Hg contamination in the region. Soil samples collected within 300 m of an inactive Hg mine contained elevated Hg concentrations (3.8-11 µg/g), which were considerably higher than Hg in soil collected from baseline sites (0.03-0.05 µg/g) distal (as much as 24 km) from mines. Only three soil samples collected within 300 m of the mine exceeded the probable effect concentration for Hg of 1.06 µg/g, above which harmful effects are likely to be observed in sediment-dwelling organisms. Concentrations of Hg in mine water runoff (7.9-14 ng/L) were generally higher than those found in springs and wells (0.05-3.1 ng/L), baseline streams (1.1-9.7 ng/L), and sources of drinking water (0.63-9.1 ng/L) collected in the Big Bend region. Concentrations of Hg in all water samples collected in this study were considerably below the 2,000 ng/L drinking water Hg guideline and the 770 ng/L guideline recommended by the U.S. Environmental Protection Agency (USEPA) to protect aquatic wildlife from chronic effects of Hg. Concentrations of Hg in water leachates obtained from leaching of mine wastes varied widely from <0.001 to 760 µg of Hg in leachate/g of sample leached, but only one leachate exceeded the USEPA Hg industrial soil screening level of 31 µg/g. Concentrations of Hg in soil gas collected at mined sites (690-82,000 ng/m(3)) were highly elevated compared to soil gas collected from baseline sites (1.2-77 ng/m(3)). However, air collected from mined areas at a height of 2 m above the ground surface contained concentrations of Hg (4.9-64 ng/m(3)) that were considerably lower than Hg in soil gas from the mined areas. Although concentrations of Hg emitted from mine-contaminated soils and mine wastes were elevated, persistent wind in southwest Texas disperses Hg in the air within a few meters of the ground surface.

Degradation of soil cyanide by single and mixed cultures of Pseudomonas stutzeri and Bacillus subtilis.

PubMed

Nwokoro, Ogbonnaya; Dibua, Marie Esther Uju

2014-03-01

The aim of this investigation was to study whether certain bacteria could be used for cyanide degradation in soil. The bacteria Pseudomonas stutzeri and Bacillus subtilis were selected based on their good growth in a minimal medium containing 0.8 mg mL-1 potassium cyanide (KCN). In this study we tested their ability to reduce cyanide levels in a medium containing 1.5 mg mL-1 of KCN. Although both microorganisms reduced cyanide levels, Pseudomonas stutzeri was the more effective test organism. Later on, the selected cultures were grown, diluted and their various cell concentrations were used individually and in combination to test their ability of cyanide degradation in soil samples collected around a cassava processing mill. Bacillus subtilis caused degradation of soil cyanide from 0.218 mg g-1 soil immediately with an inoculum concentration of 0.1 (OD600nm) to 0.072 mg g-1 soil after 10 days with an inoculum concentration of 0.6 (OD600nm) implying a 66.9 % reduction. Pseudomonas stutzeri cell concentration of 0.1 (OD600nm) decreased soil cyanide from 0.218 mg g-1 soil initially to 0.061 mg g-1 soil after 10 days with an inoculum concentration of 0.6 (OD600nm) (72 % reduction). The mixed culture of the two bacteria produced the best degradation of soil cyanide from 0.218 mg g-1 soil sample with a combined inoculum concentration of 0.1 (OD600nm) initially to 0.025 mg g-1 soil with a combined inoculum concentration of 0.6 (OD600nm) after 10 days incubation resulting in an 88.5 % degradation of soil cyanide. The analysed bacteria displayed high cyanide degradation potential and may be useful for efficient decontamination of cyanide contaminated sites.

Sonication standard laboratory module

DOEpatents

Beugelsdijk, Tony; Hollen, Robert M.; Erkkila, Tracy H.; Bronisz, Lawrence E.; Roybal, Jeffrey E.; Clark, Michael Leon

1999-01-01

A standard laboratory module for automatically producing a solution of cominants from a soil sample. A sonication tip agitates a solution containing the soil sample in a beaker while a stepper motor rotates the sample. An aspirator tube, connected to a vacuum, draws the upper layer of solution from the beaker through a filter and into another beaker. This beaker can thereafter be removed for analysis of the solution. The standard laboratory module encloses an embedded controller providing process control, status feedback information and maintenance procedures for the equipment and operations within the standard laboratory module.

BOREAS TGB-12 Isotropic Carbon Dioxide Data over the NSA

NASA Technical Reports Server (NTRS)

Trumbore, Susan; Hall, Forrest G. (Editor); Sundquist, Eric; Winston, Greg; Conrad, Sara K. (Editor)

2000-01-01

The BOREAS TGB-12 team made measurements of soil carbon inventories, carbon concentration in soil gases, and rates of soil respiration at several sites to estimate the rates of carbon accumulation and turnover in each of the major vegetation types. This data set contains information on the carbon isotopic content of carbon dioxide sampled from soils in the NSA-OBS, NSA-YJP, and NSA-OJP sites. Data were collected from 14-Nov-1993 to 10-Oct-1996. The data are stored in tabular ASCII files.

Using the VegeSafe community science program to measure, evaluate risk and advise on soil-metal contamination in Sydney backyards

NASA Astrophysics Data System (ADS)

Taylor, M. P.; Rouillon, M.; Harvey, P.; Kristensen, L. J.; Steven, G. G.

2016-12-01

The extent of metal contamination in Sydney residential garden soils was evaluated using data collated from a 3-year university community science program called VegeSafe. Despite knowledge of industrial and urban contamination amongst scientists, the general public remains under informed about the potential risks of exposure from legacy contaminants in their home environments. The Australian community was offered free soil metal screening allowing access to soil samples for research purposes. Participants followed specific soil sampling instructions and posted samples to the University for analysis with a field portable X-ray Fluorescence (pXRF) spectrometer. Over the 3-year period >5000 soil samples were collected and analysed from >1000 households across Australia, primarly from vegetable gardens. As anticipated, the primary soil metal of concern was lead: mean concentrations were 413 mg/kg (front garden), 707 mg/kg (drip line), 226 mg/kg (back yard) and 301 mg/kg (vegetable garden). The Australian soil lead guideline of 300 mg/kg for residential yards was exceeded at 40% of domestic properties. Soil lead concentrations >1000 mg/kg were identified in 15% of Sydney backyards. The incidence of highest soil lead contamination was greatest in the inner city area with concentrations declining towards background values of 20-30 mg/kg at 30-40 km distance from the city. Community engagement with VegeSafe participants has resulted in useful outcomes: dissemination of knowledge related to contamination legacies and health risks, owners building raised beds containing clean soil, and, in numerous cases owners replacing their contaminated soil. This study demonstrates the potential for similar community science programs for expediting mass sample collection of soils and dusts for analysis of traditional and emerging contaminants within the home environment.

Endospores of halophilic bacteria of the family Bacillaceae isolated from non-saline Japanese soil may be transported by Kosa event (Asian dust storm)

PubMed Central

Echigo, Akinobu; Hino, Miki; Fukushima, Tadamasa; Mizuki, Toru; Kamekura, Masahiro; Usami, Ron

2005-01-01

Background Generally, extremophiles have been deemed to survive in the extreme environments to which they had adapted to grow. Recently many extremophiles have been isolated from places where they are not expected to grow. Alkaliphilic microorganisms have been isolated from acidic soil samples with pH 4.0, and thermophiles have been isolated from samples of low temperature. Numerous moderately halophilic microorganisms, defined as those that grow optimally in media containing 0.5–2.5 Molar (3–15%) NaCl, and halotolerant microorganisms that are able to grow in media without added NaCl and in the presence of high NaCl have been isolated from saline environments such as salterns, salt lakes and sea sands. It has tacitly been believed that habitats of halophiles able to grow in media containing more than 20% (3.4 M) are restricted to saline environments, and no reports have been published on the isolation of halophiles from ordinary garden soil samples. Results We demonstrated that many halophilic bacteria that are able to grow in the presence of 20% NaCl are inhabiting in non-saline environments such as ordinary garden soils, yards, fields and roadways in an area surrounding Tokyo, Japan. Analyses of partial 16S rRNA gene sequences of 176 isolates suggested that they were halophiles belonging to genera of the family Bacillaceae, Bacillus (11 isolates), Filobacillus (19 isolates), Gracilibacillus (6 isolates), Halobacillus (102 isolates), Lentibacillus (1 isolate), Paraliobacillus (5 isolates) and Virgibacillus (17 isolates). Sequences of 15 isolates showed similarities less than 92%, suggesting that they may represent novel taxa within the family Bacillaceae. Conclusion The numbers of total bacteria of inland soil samples were in a range from 1.4 × 107/g to 1.1 × 106/g. One tenth of the total bacteria was occupied by endospore-forming bacteria. Only very few of the endospore-forming bacteria, roughly 1 out of 20,000, are halophilic bacteria. Most of the halophilic bacteria were surviving as endospores in the soil samples, in a range of less than 1 to about 500/g soil. Samples collected from seashore in a city confronting Tokyo Bay gave the total numbers of bacteria and endospores roughly 1000 time smaller than those of inland soil samples. Numbers of halophilic bacteria per gram, however, were almost the same as those of inland soil samples. A possible source of the halophilic endospore originating from Asian dust storms is discussed. PMID:16242015

Integrated field lysimetry and porewater sampling for evaluation of chemical mobility in soils and established vegetation.

PubMed

Matteson, Audrey R; Mahoney, Denis J; Gannon, Travis W; Polizzotto, Matthew L

2014-07-04

Potentially toxic chemicals are routinely applied to land to meet growing demands on waste management and food production, but the fate of these chemicals is often not well understood. Here we demonstrate an integrated field lysimetry and porewater sampling method for evaluating the mobility of chemicals applied to soils and established vegetation. Lysimeters, open columns made of metal or plastic, are driven into bareground or vegetated soils. Porewater samplers, which are commercially available and use vacuum to collect percolating soil water, are installed at predetermined depths within the lysimeters. At prearranged times following chemical application to experimental plots, porewater is collected, and lysimeters, containing soil and vegetation, are exhumed. By analyzing chemical concentrations in the lysimeter soil, vegetation, and porewater, downward leaching rates, soil retention capacities, and plant uptake for the chemical of interest may be quantified. Because field lysimetry and porewater sampling are conducted under natural environmental conditions and with minimal soil disturbance, derived results project real-case scenarios and provide valuable information for chemical management. As chemicals are increasingly applied to land worldwide, the described techniques may be utilized to determine whether applied chemicals pose adverse effects to human health or the environment.

Integrated Field Lysimetry and Porewater Sampling for Evaluation of Chemical Mobility in Soils and Established Vegetation

PubMed Central

Gannon, Travis W.; Polizzotto, Matthew L.

2014-01-01

Potentially toxic chemicals are routinely applied to land to meet growing demands on waste management and food production, but the fate of these chemicals is often not well understood. Here we demonstrate an integrated field lysimetry and porewater sampling method for evaluating the mobility of chemicals applied to soils and established vegetation. Lysimeters, open columns made of metal or plastic, are driven into bareground or vegetated soils. Porewater samplers, which are commercially available and use vacuum to collect percolating soil water, are installed at predetermined depths within the lysimeters. At prearranged times following chemical application to experimental plots, porewater is collected, and lysimeters, containing soil and vegetation, are exhumed. By analyzing chemical concentrations in the lysimeter soil, vegetation, and porewater, downward leaching rates, soil retention capacities, and plant uptake for the chemical of interest may be quantified. Because field lysimetry and porewater sampling are conducted under natural environmental conditions and with minimal soil disturbance, derived results project real-case scenarios and provide valuable information for chemical management. As chemicals are increasingly applied to land worldwide, the described techniques may be utilized to determine whether applied chemicals pose adverse effects to human health or the environment. PMID:25045915

BTE-OX biodegradation kinetics with MTBE through bioaugmentation.

PubMed

Acuna-Askar, K; Villarreal-Chiu, J F; Gracia-Lozano, M V; Garza-Gonzalez, M T; Chavez-Gomez, B; Rodriguez-Sanchez, I P; Barrera-Saldana, H A

2004-01-01

The biodegradation kinetics of BTE-oX and MTBE, mixed all together, in the presence of bioaugmented bacterial populations as high as 880 mg/L VSS was evaluated. The effect of soil in aqueous samples and the effect of Tergitol NP-10 on substrate biodegradation rates were also evaluated. Biodegradation kinetics was evaluated for 36 hours, every 6 hours. Benzene and o-xylene biodegradation followed a first-order one-phase kinetic model, whereas toluene and ethylbenzene biodegradation was well described by a first-order two-phase kinetic model in all samples. MTBE followed a zero-order removal kinetic model in all samples. The presence of soil in aqueous samples retarded BTE-oX removal rates, with the highest negative effect on o-xylene. The presence of soil enhanced MTBE removal rate. The addition of Tergitol NP-10 to aqueous samples containing soil had a positive effect on substrate removal rate in all samples. Substrate percent removals ranged from 95.4-99.7% for benzene, toluene and ethylbenzene. O-xylene and MTBE percent removals ranged from 55.9-90.1% and 15.6-30.1%, respectively.

Detection of environmentally persistent free radicals at a superfund wood treating site.

PubMed

dela Cruz, Albert Leo N; Gehling, William; Lomnicki, Slawomir; Cook, Robert; Dellinger, Barry

2011-08-01

Environmentally persistent free radicals (EPFRs) have previously been observed in association with combustion-generated particles and airborne PM(2.5) (particulate matter, d < 2.5um). The purpose of this study was to determine if similar radicals were present in soils and sediments at Superfund sites. The site was a former wood treating facility containing pentachlorophenol (PCP) as a major contaminant. Both contaminated and noncontaminated (just outside the contaminated area) soil samples were collected. The samples were subjected to the conventional humic substances (HS) extraction procedure. Electron paramagnetic resonance (EPR) spectroscopy was used to measure the EPFR concentrations and determine their structure for each sample fraction. Analyses revealed a ∼30× higher EPFR concentration in the PCP contaminated soils (20.2 × 10(17) spins/g) than in the noncontaminated soil (0.7 × 10(17) spins/g). Almost 90% of the EPFR signal originated from the minerals/clays/humins fraction. GC-MS analyses revealed ∼6500 ppm of PCP in the contaminated soil samples and none detected in the background samples. Inductively coupled plasma-atomic emission spectrophotometry (ICP-AES) analyses revealed ∼7× higher concentrations of redox-active transition metals, in the contaminated soils than the noncontaminated soil. Vapor phase and liquid phase dosing of the clays/minerals/humins fraction of the soil with PCP resulted in an EPR signal identical to that observed in the contaminated soil, strongly suggesting the observed EPFR is pentachlorophenoxyl radical. Chemisorption and electron transfer from PCP to transition metals and other electron sinks in the soil are proposed to be responsible for EPFR formation.

Comparing molecular composition of dissolved organic matter in soil and stream water: Influence of land use and chemical characteristics.

PubMed

Seifert, Anne-Gret; Roth, Vanessa-Nina; Dittmar, Thorsten; Gleixner, Gerd; Breuer, Lutz; Houska, Tobias; Marxsen, Jürgen

2016-11-15

Electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FT-ICR-MS) was used to examine the molecular composition of dissolved organic matter (DOM) from soils under different land use regimes and how the DOM composition in the catchment is reflected in adjacent streams. The study was carried out in a small area of the Schwingbach catchment, an anthropogenic-influenced landscape in central Germany. We investigated 30 different soil water samples from 4 sites and different depths (managed meadow (0-5cm, 40-50cm), deciduous forest (0-5cm), mixed-coniferous forest (0-5cm) and agricultural land (0-5cm, 40-50cm)) and 8 stream samples. 6194 molecular formulae and their magnitude-weighted parameters ((O/C)w, (H/C)w, (N/C)w, (AI-mod)w, (DBE/C)w, (DBE/O)w, (DBE-O)w, (C#)w, (MW)w) were used to describe the molecular composition of the samples. The samples can be roughly divided in three groups. Group 1 contains samples from managed meadow 40-50cm and stream water, which are characterized by high saturation compared to samples from group 2 including agricultural samples and samples from the surface meadow (0-5cm), which held more nitrogen containing and aromatic compounds. Samples from both forested sites (group 3) are characterized by higher molecular weight and O/C ratio. Environmental parameters vary between sites and among these parameters pH and nitrate significantly affect chemical composition of DOM. Results indicate that most DOM in streams is of terrestrial origin. However, 120 molecular formulae were detected only in streams and not in any of the soil samples. These compounds share molecular formulae with peptides, unsaturated aliphatics and saturated FA-CHO/FA-CHOX. Compounds only found in soil samples are much more aromatic, have more double bonds and a much lower H/C ratio but higher oxygen content, which indicates the availability of fresh plant material and less microbial processed material compared to stream samples. Copyright © 2016 Elsevier B.V. All rights reserved.

Environmental fate of roxarsone in poultry litter. Part II. Mobility of arsenic in soils amended with poultry litter

USGS Publications Warehouse

Rutherford, D.W.; Bednar, A.J.; Garbarino, J.R.; Needham, R.; Staver, K.W.; Wershaw, R. L.

2003-01-01

Poultry litter often contains arsenic as a result of organo-arsenical feed additives. When the poultry litter is applied to agricultural fields, the arsenic is released to the environment and may result in increased arsenic in surface and groundwater and increased uptake by plants. The release of arsenic from poultry litter, litter-amended soils, and soils without litter amendment was examined by extraction with water and strong acids (HCI and HN03). The extracts were analyzed for As, C, P, Cu, Zn, and Fe. Copper, zinc, and iron are also poultry feed additives. Soils with a known history of litter application and controlled application rate of arsenic-containing poultry litter were obtained from the University of Maryland Agricultural Experiment Station. Soils from fields with long-term application of poultry litter were obtained from a tilled field on the Delmarva Peninsula (MD) and an untilled Oklahoma pasture. Samples from an adjacent forest or nearby pasture that had no history of litter application were used as controls. Depth profiles were sampled for the Oklahoma pasture soils. Analysis of the poultry litter showed that 75% of the arsenic was readily soluble in water. Extraction of soils shows that weakly bound arsenic mobilized by water correlates positively with C, P, Cu, and Zn in amended fields and appears to come primarily from the litter. Strongly bound arsenic correlates positively with Fe in amended fields and suggests sorption or coprecipitation of As and Fe in the soil column.

Preliminary examination of lunar samples from apollo 14.

PubMed

1971-08-20

The major findings of the preliminary examination of the lunar samples are as follows: 1) The samples from Fra Mauro base may be contrasted with those from Tranquillity base and the Ocean of Storms in that about half the Apollo 11 samples consist of basaltic rocks, and all but three Apollo 12 rocks are basaltic, whereas in the Apollo 14 samples only two rocks of the 33 rocks over 50 grams have basaltic textures. The samples from Fra Mauro base consist largely of fragmental rocks containing clasts of diverse lithologies and histories. Generally the rocks differ modally from earlier lunar samples in that they contain more plagioclase and contain orthopyroxene. 2) The Apollo 14 samples differ chemically from earlier lunar rocks and from their closest meteorite and terrestrial analogs. The lunar material closest in composition is the KREEP component (potassium, rare earth elements, phosphorus), "norite," "mottled gray fragments" (9) from the soil samples (in particular, sample 12033) from the Apollo 12 site, and the dark portion of rock 12013 (10). The Apollo 14 material is richer in titanium, iron, magnesium, and silicon than the Surveyor 7 material, the only lunar highlands material directly analyzed (11). The rocks also differ from the mare basalts, having much lower contents of iron, titanium, manganese, chromium, and scandium and higher contents of silicon, aluminum, zirconium, potassium, uranium, thorium, barium, rubidium, sodium, niobium, lithium, and lanthanum. The ratios of potassium to uranium are lower than those of terrestrial rocks and similar to those of earlier lunar samples. 3) The chemical composition of the soil closely resembles that of the fragmental rocks and the large basaltic rock (sample 14310) except that some elements (potassium, lanthanum, ytterbium, and barium) may be somewhat depleted in the soil with respect to the average rock composition. 4) Rocks display characteristic surface features of lunar material (impact microcraters, rounding) and shock effects similar to those observed in rocks and soil from the Apollo 11 and Apollo 12 missions. The rocks show no evidence of exposure to water, and their content of metallic iron suggests that they, like the Apollo 11 and Apollo 12 material, were formed and have remained in an environment with low oxygen activity. 5) The concentration of solar windimplanted material in the soil is large, as was the case for Apollo 11 and Apollo 12 soil. However, unlike previous fragmental rocks, Apollo 14 fragmental rocks possess solar wind contents ranging from approximately that of the soil to essentially zero, with most rocks investigated falling toward one extreme of this range. A positive correlation appears to exist between the solar wind components, carbon, and (20)Ne, of fragmental rocks and their friability (Fig. 12). 6) Carbon contents lie within the range of carbon contents for Apollo 11 and Apollo 12 samples. 7) Four fragmental rocks show surface exposure times (10 x 10(6) to 20 x 10(6) years) about an order of magnitude less than typical exposure times of Apollo 11 and Apollo 12 rocks. 8) A much broader range of soil mechanics properties was encountered at the Apollo 14 site than has been observed at the Apollo 11, Apollo 12, and Surveyor landing sites. At different points along the traverses of the Apollo 14 mission, lesser cohesion, coarser grain size, and greater resistance to penetration was found than at the Apollo 11 and Apollo 12 sites. These variations are indicative of a very complex, heterogeneous deposit. The soils are more poorly sorted, but the range of grain size is similar to those of the Apollo 11 and Apollo 12 soils. 9) No evidence of biological material has been found in the samples to date.

NHEXAS PHASE I MARYLAND STUDY--QA ANALYTICAL RESULTS FOR PESTICIDES IN BLANKS

EPA Science Inventory

The Pesticides in Blanks data set contains the analytical results of measurements of up to 20 pesticides in 70 blank samples from 46 households. Measurements were made in blank samples of indoor air, dust, soil, drinking water, food, beverages, and blood serum. Blank samples we...

Evaluation of meso fauna soil as bio-indicator of environmental quality in forests remnants in the city of São Paulo - Preliminary Results

NASA Astrophysics Data System (ADS)

Patucci, Natalia; Oliveira, Deborah

2014-05-01

Soil quality is particularly through composition and structure, as well as by, measured by physical and chemical indicators, as well as by living organisms contained therein, which play the most varied ecological functions. The abundance and diversity of soil macrofauna in ecosystems can be affected by many factors, precisely because these organisms are sensitive to environmental changes, whether induced or natural. Thus, soil populations can be measured as bioindicators, since changes in the community may indicate possible changes in soil functioning. This research aims to survey the biodiversity of meso soil fauna environments with remaining Atlantic Forest (Fontes do Ipiranga park, Cantareira park and Jaraguá park) in order to detect specific features and significant changes in ecological function performed by these soil communities. The project aims to develop an overview of multivariate understanding about soil, especially the relation of variation of pedofauna with the occurring physical and chemical modifications in order to be able to prove the adaptation of soil fauna with variations in temperature, humidity, sunshine, influence of vegetation, soil genesis and topographic gradient. According to Lavelle & Spain (2001), the temperature and humidity are the main factors that activate the metabolic regulation in subjects of soil fauna, which ultimately determine their spatial distribution, periods of increased activity, peculiarities and significant changes, the function of these communities in the substrate. Two combining sampling will be performed, one in the rainy season, in January, and another in the dry season, in July, with the purpose of measuring the diversity of populations according to seasonality. Invertebrates associated soil interface - burlap (Moreira et al, 2010) will be caught by pitfall traps, which will be distributed in three installments by park, containing a sampling gride with nine equidistant points 30 meters of each other. Through Provid method, idealized by Antoniolli, ZI et al,. (2006) capture is the use of Pet Bottle 2l as a trap where her windows with dimensions of 6 cm are made powder 4 cm in height of 20 cm which will be buried in the ground. The solution 200ml placed inside the bottle is a mixture of water and a neutral detergent to 2.5%. Identification of macro invertebrate fauna will be made as soon as possible to avoid loss of physiological characteristics or death of the animal, which complicates the identification. During the extraction place the soil or animals collected in a tray, and carefully, with the aid of forceps, pulls out all visible animals, which are passed on to a container containing 70% alcohol, properly identified. With the aid of microscope and are grouped taxonomically in the kingdom, phylum, class and order (Papavero, 1994). To quantify biodiversity, ie, to understand the number of individuals relating the amount and manner in which they are distributed in the environment, the tests of abundance and heterogeneity (Martin & Santos, 1999), Simpson dominance (Odum , 1983), Tukey test 5% and multivariate analysis. Soil surveys (Embrapa, 1997) will be conducted so that the plots overlap to the same kinds of soil stains. Soil samples will be collected near the sampling sites for analysis of some physical parameters (Embrapa, 1997), such as texture, structure, porosity, aggregation, field capacity and compaction ; chemical (Embrapa, 1997) as pH, fractional organic matter, phosphorus, potassium, calcium and magnesium and other mineral nutrients such as nitrogen, sulfur, boron, manganese, zinc, copper, cobalt, chlorinebecause these nutrients are some activators enzymes that perform specific functions in the environment such as: regulation of water balance, fixing and cycling of nutrients in soil, plant growth and development, but also interfere with the functioning of organisms of soil fauna. This analysis is very important in research because the shortage or excess of any of these nutrients cited, may cause changes in soil functioning (Embrapa, 1997). Ecological Indicators ; forests remnants ; soil invertebrates

Capillary-driven microfluidic paper-based analytical devices for lab on a chip screening of explosive residues in soil.

PubMed

Ueland, Maiken; Blanes, Lucas; Taudte, Regina V; Stuart, Barbara H; Cole, Nerida; Willis, Peter; Roux, Claude; Doble, Philip

2016-03-04

A novel microfluidic paper-based analytical device (μPAD) was designed to filter, extract, and pre-concentrate explosives from soil for direct analysis by a lab on a chip (LOC) device. The explosives were extracted via immersion of wax-printed μPADs directly into methanol soil suspensions for 10min, whereby dissolved explosives travelled upwards into the μPAD circular sampling reservoir. A chad was punched from the sampling reservoir and inserted into a LOC well containing the separation buffer for direct analysis, avoiding any further extraction step. Eight target explosives were separated and identified by fluorescence quenching. The minimum detectable amounts for all eight explosives were between 1.4 and 5.6ng with recoveries ranging from 53-82% from the paper chad, and 12-40% from soil. This method provides a robust and simple extraction method for rapid identification of explosives in complex soil samples. Copyright © 2016 Elsevier B.V. All rights reserved.

A study of psychrophilic organisms isolated from the manufacture and assembly areas of spacecraft to be used in the Viking mission

NASA Technical Reports Server (NTRS)

Foster, T. L.

1974-01-01

The effect of storage of dry heat treated Teflon ribbons under nitrogen gas followed by high vacuum on the recovery of hardy organisms from the ribbons was studied. A similar experiment was performed on spore crops of hardy organisms recovered previously from Cape Canaveral. Hardy organisms have been inoculated onto slides and subjected to an artificial Martian environment in an attempt to demonstrate their growth in this environment. Additional experiments using the artificial Martian environment include response of soil samples from the VAB with both constant temperature and freeze-thaw cycles. These experiments were performed with dried soil and soil containing added water. Other investigations included the effect of heatshock on soil samples, psychrophilic counts of new soil samples from the manufacture area of the Viking spacecraft, effect of pour plate versus spread plate on psychrophilic counts, and preparation of spore crops of hardy organisms from Cape Canaveral.

Trench 'bathtubbing' and surface plutonium contamination at a legacy radioactive waste site.

PubMed

Payne, Timothy E; Harrison, Jennifer J; Hughes, Catherine E; Johansen, Mathew P; Thiruvoth, Sangeeth; Wilsher, Kerry L; Cendón, Dioni I; Hankin, Stuart I; Rowling, Brett; Zawadzki, Atun

2013-01-01

Radioactive waste containing a few grams of plutonium (Pu) was disposed between 1960 and 1968 in trenches at the Little Forest Burial Ground (LFBG), near Sydney, Australia. A water sampling point installed in a former trench has enabled the radionuclide content of trench water and the response of the water level to rainfall to be studied. The trench water contains readily measurable Pu activity (~12 Bq/L of (239+240)Pu in 0.45 μm-filtered water), and there is an associated contamination of Pu in surface soils. The highest (239+240)Pu soil activity was 829 Bq/kg in a shallow sample (0-1 cm depth) near the trench sampling point. Away from the trenches, the elevated concentrations of Pu in surface soils extend for tens of meters down-slope. The broader contamination may be partly attributable to dispersion events in the first decade after disposal, after which a layer of soil was added above the trenched area. Since this time, further Pu contamination has occurred near the trench-sampler within this added layer. The water level in the trench-sampler responds quickly to rainfall and intermittently reaches the surface, hence the Pu dispersion is attributed to saturation and overflow of the trenches during extreme rainfall events, referred to as the 'bathtub' effect.

Apollo 16 soils - Grain size analyses and petrography

NASA Technical Reports Server (NTRS)

Heiken, G. H.; Mckay, D. S.; Fruland, R. M.

1973-01-01

Soils from South Ray Crater, North Ray Crater, and the interray area of Station 10 have a similar provenance, containing breccia fragments of low to medium metamorphic grade and low light/dark lithic fragment ratios; these appear to be characteristic of the Cayley Formation. The primary difference between soils possibly derived from North Ray and South Ray craters is in the agglutinate content. A soil from Stone Mountain (Station 4) is characterized by breccia fragments of medium to high metamorphic grade and a high light/dark lithic fragment ratio; this soil may be derived from the Descartes Formation. Differences between the selenomorphic units, the Descartes and Cayley formations, may be lithologic as well as structural. The mean grain size varies from 84 to 280 microns, and all of the samples are poorly to very poorly sorted. There appears to be a relation between the sorting, grain size, and agglutinate content, with the finer-grained, better sorted soils containing more than 30% agglutinates. 'Shadowed' soils, collected close to large boulders, are similar in all respects to the 'reference' soils collected at least 5 m from the boulders.

Measurement of helium isotopes in soil gas as an indicator of tritium groundwater contamination.

PubMed

Olsen, Khris B; Dresel, P Evan; Evans, John C; McMahon, William J; Poreda, Robert

2006-05-01

The focus of this study was to define the shape and extent of tritium groundwater contamination emanating from a legacy burial ground and to identify vadose zone sources of tritium using helium isotopes (3He and 4He) in soil gas. Helium isotopes were measured in soil-gas samples collected from 70 sampling points around the perimeter and downgradient of a burial ground that contains buried radioactive solid waste. The soil-gas samples were analyzed for helium isotopes using rare gas mass spectrometry. 3He/4He ratios, reported as normalized to the air ratio (RA), were used to locate the tritium groundwater plume emanating from the burial ground. The 3He (excess) suggested that the general location of the tritium source is within the burial ground. This study clearly demonstrated the efficacy of the 3He method for application to similar sites elsewhere within the DOE weapons complex.

Vadose zone studies at an industrial contaminated site: the vadose zone monitoring system and cross-hole geophysics

NASA Astrophysics Data System (ADS)

Fernandez de Vera, Natalia; Beaujean, Jean; Jamin, Pierre; Nguyen, Frédéric; Dahan, Ofer; Vanclooster, Marnik; Brouyère, Serge

2014-05-01

In order to improve risk characterization and remediation measures for soil and groundwater contamination, there is a need to improve in situ vadose zone characterization. However, most available technologies have been developed in the context of agricultural soils. Such methodologies are not applicable at industrial sites, where soils and contamination differ in origin and composition. In addition, most technologies are applicable only in the first meters of soils, leaving deeper vadose zones with lack of information, in particular on field scale heterogeneity. In order to overcome such difficulties, a vadose zone experiment has been setup at a former industrial site in Belgium. Industrial activities carried out on site left a legacy of soil and groundwater contamination in BTEX, PAH, cyanide and heavy metals. The experiment comprises the combination of two techniques: the Vadose Zone Monitoring System (VMS) and cross-hole geophysics. The VMS allows continuous measurements of water content and temperature at different depths of the vadose zone. In addition, it provides the possibility of pore water sampling at different depths. The system is formed by a flexible sleeve containing monitoring units along its depth which is installed in a slanted borehole. The flexible sleeve contains three types of monitoring units in the vadose zone: Time Domain Transmissometry (TDT), which allows water content measurements; Vadose Sampling Ports (VSP), used for collecting water samples coming from the matrix; the Fracture Samplers (FS), which are used for retrieving water samples from the fractures. Cross-hole geophysics techniques consist in the injection of an electrical current using electrodes installed in vertical boreholes. From measured potential differences, detailed spatial patterns about electrical properties of the subsurface can be inferred. Such spatial patterns are related with subsurface heterogeneities, water content and solute concentrations. Two VMS were installed in two slanted boreholes on site, together with four vertical boreholes containing electrodes for geophysical measurements. Currently the site is being monitored under natural recharge conditions. Initial results show the reaction of the vadose zone to rainfall events, as well as chemical evolution of soil water with depth.

Public-health assessment for Algoma Municipal Landfill, Algoma, Kewaunee County, Wisconsin, Region 5. CERCLIS No. WID980610380. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1992-07-22

The Algoma Landfill Superfund Site is a former municipal landfill which accepted hazardous industrial waste from several area companies. The contaminant of concern is benzene in on-site groundwater. Samples taken from off-site private water supplies in the vicinity of the landfill did not indicate the presence of contaminants. On-site soil and sediment samples revealed low levels of inorganic chemicals. Although soil samples were not analyzed for asbestos it remains a contaminant of concern since asbestos-containing debris was reportedly buried as the site. The Algoma Landfill Superfund Site is a indeterminate public health hazard. There is insufficient data to evaluate workermore » exposure to airborne asbestos in the past when Kalo dust was deposited at the site. The public health assessment recommends that access to the site be restricted to prevent trespassing and disturbance of the soil. Additional groundwater monitoring and characterization is recommended as well as sampling of surface soil for asbestos contamination.« less

Chitinolytic and pectinolytic community in the vertical structure of chernozem's zone ecosystems

NASA Astrophysics Data System (ADS)

Lukacheva, E.; Manucharova, N.

2012-04-01

Chitin is a long-chain polymer of a N-acetylglucosamine and is found in many places throughout the natural world. Pectin is a structural heteropolysaccharide contained in the primary cell walls of terrestrial plants. Roots of the plants and root crops contain pectin. Chitin and pectin are widely distributed throughout the natural world. For this reason it is important to investigate the structural and functional properties of complex organisms, offering degradation of these biopolymers in the terrestrial and soil ecosystems. It is known that ecosystems have their own structure. It is possible to allocate some vertical tiers: phylloplane, litter (soil covering), soil. We investigated chitinolytic and pektinolytic microbial communities dedicated to different layers of the ecosystem of the chernozem zone. Quantity of eukaryote and procaryote organisms increased in the test samples with chitin and pectin. Increasing of eukaryote in samples with pectin was more then in samples with chitin. Also should be noted the significant increasing of actinomycet`s quantity in the samples with chitin in comparison with samples with pectin. The variety and abundance of bacteria in the litter samples increased an order of magnitude as compared to other options investigated. Further prokaryote community was investigated by method FISH (fluorescence in situ hybridization). FISH is a cytogenetic technique developed that is used to detect and localize the presence or absence of specific DNA sequences on chromosomes. Quantity of Actinomycets and Firmicutes was the largest among identified cells with metabolic activity in soil samples. Should be noted significant increasing of the quantity of Acidobateria and Bacteroidetes in pectinolytic community and Alphaproteobacteria in chitinolytic community. In considering of the phylogenetic structure investigated communities in samples of the litter should be noted increase in the segment of Proteobacteria. Increasing of this group of microorganisms was also detected in samples of the phylloplane. Also should be noted increasing of Baceroidetes in these samples. Further inoculation from investigated samples was provided. The dominant species of microorganisms were isolated on dense nutrient media. These microorganisms were detected by sequence analysis. Thus the differences of decomposing biopolymers were educed in the microbial communities in the terrestrial and soil ecosystems.

Detection of salts in soil using transversely excited atmospheric (TEA) carbon dioxide (CO2) laser-induced breakdown spectroscopy (LIBS) by the aid of a metal mesh

NASA Astrophysics Data System (ADS)

Idris, N.; Ramli, M.; Khumaeni, A.; Kurihara, K.

2018-04-01

In this work, a nickel metal mesh was used to allow a direct detection of salt in soil sample by LIBS utilizing unique characteristics of a TEA CO2. The metal mesh is placed in the front of the soil sample to prevent the soil sample from blowing off upon focusing the high pulsed laser beam irradiation. LIBS apparatus used in this work is a TEA CO2 laser operated at wavelength of 10.6 μm with pulse energy and duration of 3J and 200 ns, respectively. The laser beam was focused using a ZnSe lens (f = 200 mm) onto soil sample after passing through the metal mesh. The emission spectrum from the induced plasma was detected using an optical multichannel analyzer (OMA) system consisting of a 0.32-m-focal length spectrograph with a grating of 1200 graves/mm and a 1024-channel photodiode detector array with a micro-channel plate intensifier. The soil sample used is a standard soil and ordinary soil containing several salts such as Ca, Mg at high concentration. The LIBS experiment was carried out at high pressure surrounding gas of 1 atmosphere. It was observed that by the aid of the metal mesh, strong breakdown gas plasma can be produced just after TEA CO2 laser irradiation on soil sample without significant sample blowing off. It was found that emission lines from salts, Ca (Ca II 393. 3 nm, Ca II 396.3 nm, Ca I 422.5 nm), and also other salts including Mg and Na can clearly be detected with strong emission intensity and narrow spectral width. This result implies that a TEA CO2 LIBS assisted by the metal mesh (metal mesh method) can be used for direct analysis several salts such as Ca, Mg, and Na in soil sample.

Combinational effects of sulfomethoxazole and copper on soil microbial community and function.

PubMed

Liu, Aiju; Cao, Huansheng; Yang, Yan; Ma, Xiaoxuan; Liu, Xiao

2016-03-01

Sulfonamides and Cu are largely used feed additives in poultry farm. Subsequently, they are spread onto agricultural soils together with contaminated manure used as fertilizer. Both sulfonamides and Cu affect the soil microbial community. However, an interactive effect of sulfonamides and Cu on soil microorganisms is not well understood. Therefore, a short-time microcosm experiment was conducted to investigate the interaction of veterinary antibiotic sulfomethoxazole (SMX) and Cu on soil microbial structure composition and functions. To this end, selected concentrations of SMX (0, 5, and 50 mg kg(-1)) and Cu (0, 300, and 500 mg kg(-1)) were combined, respectively. Clear dose-dependent effects of SMX on microbial biomass and basal respiration were determined, and these effects were amplified in the presence of additional Cu. For activities of soil enzymes including β-glucosidase, urease, and protease, clear reducing effects were determined in soil samples containing 5 or 50 mg kg(-1) of SMX, and the interaction of SMX and Cu was significant, particularly in soil samples containing 50 mg kg(-1) SMX or 500 mg kg(-1) Cu. SMX amendments, particularly in combination with Cu, significantly reduced amounts of the total, bacterial, and fungal phospholipid fatty acids (PLFAs) in soil. Moreover, the derived ratio of bacteria to fungi decreased significantly with incremental SMX and Cu, and principal component analysis of the PLFAs showed that soil microbial composition was significantly affected by SMX interacted with Cu at 500 mg kg(-1). All of these results indicated that the interaction of SMX and Cu was synergistic to amplify the negative effect of SMX on soil microbial biomass, structural composition, and even the enzymatic function.

Interaction of Sr-90 with site candidate soil for demonstration disposal facility at Serpong

NASA Astrophysics Data System (ADS)

Setiawan, Budi; Mila, Oktri; Safni

2014-03-01

Interaction of radiostrontium (Sr-90) with site candidate soil for demonstration disposal facility to be constructed in the near future at Serpong has been done. This activity is to anticipate the interim storage facility at Serpong nuclear area becomes full off condition, and show to the public how radioactive waste can be well managed with the existing technology. To ensure that the location is save, a reliability study of site candidate soil becomes very importance to be conducted through some experiments consisted some affected parameters such as contact time, effect of ionic strength, and effect of Sr+ ion in solution. Radiostrontium was used as a tracer on the experiments and has role as radionuclide reference in low-level radioactive waste due to its long half-live and it's easy to associate with organism in nature. So, interaction of radiostrontium and soil samples from site becomes important to be studied. Experiment was performed in batch method, and soil sample-solution containing radionuclide was mixed in a 20 ml of PE vial. Ratio of solid: liquid was 10-2 g/ml. Objective of the experiment is to collect the specific characteristics data of radionuclide sorption onto soil from site candidate. Distribution coefficient value was used as indicator where the amount of initial and final activities of radiostrontium in solution was compared. Result showed that equilibrium condition was reached after contact time 10 days with Kd values ranged from 1600-2350 ml/g. Increased in ionic strength in solution made decreased of Kd value into soil sample due to competition of background salt and radiostrontium into soil samples, and increased in Sr ion in solution caused decreased of Kd value in soil sample due to limitation of sorption capacity in soil samples. Fast condition in saturated of metal ion into soil samples was reached due to a simple reaction was occurred.

Natural radioactivity in soils of the state of Rio de Janeiro (Brazil): Radiological characterization and relationships to geological formation, soil types and soil properties.

PubMed

Ribeiro, F C A; Silva, J I R; Lima, E S A; do Amaral Sobrinho, N M B; Perez, D V; Lauria, D C

2018-02-01

Located in the south-western part of Brazil, the state of Rio de Janeiro is geotectonically contained within a complex structural province that resulted in the amalgamation of the Western Gondwana Paleocontinent. To undertake an extensive radiological characterization of this complex geological province and investigate the influence of bedrock, soil type and soil chemical-physical characteristics on natural radionuclide levels in soils, 259 surface soil samples were collected that encompassed the main soil types and geological formations throughout the state. Gamma spectrometry analysis of the samples resulted in median values of 114 Bq.kg -1 for 40 K, 32 Bq.kg -1 for 226 Ra and 74 Bq.kg -1 for 228 Ra. The median value for 226 Ra was similar to the world median value for soils, the 40 K value was well below the worldwide value, and that for 228 Ra exceeded the world median value. The intense weathering caused by the high rainfall rates and high temperatures may be responsible for the low levels of 40 K in the soils, of which the strongly acidic and clayey soils are markedly K-depleted. A soil from a high-grade metamorphic rock (granulite) presented the lowest 226 Ra (18 Bq.kg -1 ) content, whereas the highest levels for 226 Ra (92 Bq.kg -1 ) and 228 Ra (139 Bq.kg - 1) were observed in a young soil enriched in primary minerals (Leptsol). A lowland soil (Gleysol) showed the highest median of 40 K (301 Bq.kg -1 ). Strongly acidic soils tended to present high amounts of 226 Ra, and sandy soils tended to contain low levels of 228 Ra. The external radiation dose indicates that the state has a background radiation level within the natural range. Copyright © 2017 Elsevier Ltd. All rights reserved.

Chemotactic selection of pollutant degrading soil bacteria

DOEpatents

Hazen, T.C.

1991-03-04

A method is described for identifying soil microbial strains which may be bacterial degraders of pollutants. This method includes: Placing a concentration of a pollutant in a substantially closed container; placing the container in a sample of soil for a period of time ranging from one minute to several hours; retrieving the container and collecting its contents; microscopically determining the identity of the bacteria present. Different concentrations of the pollutant can be used to determine which bacteria respond to each concentration. The method can be used for characterizing a polluted site or for looking for naturally occurring biological degraders of the pollutant. Then bacteria identified as degraders of the pollutant and as chemotactically attracted to the pollutant are used to innoculate contaminated soil. To enhance the effect of the bacteria on the pollutant, nutrients are cyclicly provided to the bacteria then withheld to alternately build up the size of the bacterial colony or community and then allow it to degrade the pollutant.

A Multifaceted Sampling Approach to Better Understanding Biogeochemical and Hydrogeological Controls on Uranium Mobility at a Former Uranium Mill Tailings Site in Riverton, Wyoming

NASA Astrophysics Data System (ADS)

Dam, W. L.; Johnson, R. H.; Campbell, S.; Bone, S. E.; Noel, V.; Bargar, J.

2015-12-01

Understanding uranium mobility in subsurface environments is not trivial. Obtaining sufficient data to accurately represent soil and aquifer characteristics can require unique approaches that evolve with added site knowledge. At Riverton, the primary source of uranium mill tailings remaining from ore processing was removed but contaminant plumes have persisted longer than predicted by groundwater modeling. What are the primary mechanisms controlling plume persistence? DOE is conducting new characterization studies to assist our understanding of underlying biogeochemical and hydrogeological mechanisms affecting secondary sources. A variety of field sampling techniques are being sequentially employed including augering, trenching, pore water sampling, and installing multi-level wells. In August 2012, vadose zone soil samples from 34 locations and groundwater from 103 boreholes were collected with Geoprobe ® direct push rods. Lower than expected uranium concentrations in composited shallow soils indicated the need for more focused and deeper samples. In May 2014, soil samples containing evaporites were collected along the bank of the Little Wind River; elevated uranium concentrations in evaporite minerals correlated with plume configurations and reflect contaminated groundwater discharge at the river. In September 2014, hand anger samples collected by the river and oxbow lake also indicated the presence of organic rich zones containing elevated uranium (>50 mg/kg). Subsequent samples collected from five backhoe trenches in May 2015 revealed a highly heterogeneous vadose zone composed of clay, silt, sand and cobbles containing evaporites and organic rich zones which may interact with groundwater plumes.Plans for August 2015 include sonic drilling to obtain continuous cores from the surface down to the base of the surficial aquifer with multi-level monitoring wells constructed in each borehole to assess vertical variation in groundwater chemistry. Temporary well-points will be installed adjacent to the river to assess geochemical and flow controls in the area of plume stagnation. Analyses include critical element speciation (C, S, Fe, and U), microbes, isotopes, diffusivity and flow characteristics. These activities support a dramatically improved understanding of plume persistence.

Electrical properties of lunar soil dependence on frequency, temperature and moisture.

NASA Technical Reports Server (NTRS)

Strangway, D. W.; Chapman, W. B.; Olhoeft, G. R.; Carnes, J.

1972-01-01

It was found that the dielectric constant and loss tangent of lunar soil samples in the range from 100 Hz to 1 MHz are not strongly dependent on frequency provided care is taken to avoid exposure of the sample to atmospheric air containing moisture. The loss tangent value obtained is lower by nearly a factor 10 than any previously reported value. The measurement data imply that the surface layers of the moon are probably extremely transparent to radiowaves.

Development of a Scalable Process Control System for Chemical Soil Washing to Remove Uranyl Oxide

DTIC Science & Technology

2015-05-01

ICET also has a fully equipped counting laboratory for the evaluation of radioactive samples . Photographs of the 1-meter and 3-meter motorized...the leachate will be monitored using a gamma detector. There are numerous naturally occurring radioactive materials in soil . ICET has developed a...48.6% from 238U and 49.2% from 234U. The 238U in NU also contains daughters that are radioactive . This increases the activity of samples over long

Qualitative relation between heavy metal concentration in soil and agricultural products: a Chinese peri-urban case study

NASA Astrophysics Data System (ADS)

Kikuchi, Ryunosuke; Ferreira, Carla Sofia; Dinis Ferreira, Antonio

2017-04-01

A peri-urban area refers to a transition or interaction zone, where urban and rural activities are juxtaposed, and landscape features are subject to rapid modifications, mainly due to human activities. It is reported that peri-urban areas which might include valuable protected areas (e.g. forested hills, preserved woodlands, prime agricultural lands, etc.) can provide essential life support services for urban residents. A peri-urban area is not only a zone experiencing the immediate impacts of land demands from urban growth and pollution, but it is also a wider market-related zone of influence, recognized for the supply of agricultural and natural resource products. It is reported that China's environmental crisis is one of the most pressing challenges to emerge from the country's rapid industrialization; therefore a field study was carried out to investigate the qualitative relation of soil property with vegetable agricultural products in the Chinese peri-urban area located in Luoyang city (34°37'N and 112°27'E). Soil, water and plant (e.g. squash, Cucurbita maxima) samples were taken over the study site, and heavy metal concentrations were analyzed. All the soil samples showed Cd concentrations exceeded the permissible level established by Chinese guidelines for soil quality (0.3 mg/kg). The contents of Zn, Pb and Cu also surpassed the Chinese guideline levels (Zn = 250 mg/kg, Pb = 50 mg/kg and Cu = 100 mg/kg) in several soil samples. Although the sampled plants contained some degree of all the heavy metals, only the Al concentration was high in the Cucurbita maxima samples (317 mg/kg), which is a specie of cultivated squash. Considering the world market and the global trade of agricultural products, it can be said that the food risk associated with farm products containing Al is not local but global. It is concluded that an environmental contamination of the peri-urban areas may lead to the threat to food security.

Changes in metal mobility associated with bark beetle-induced tree mortality.

PubMed

Mikkelson, Kristin M; Bearup, Lindsay A; Navarre-Sitchler, Alexis K; McCray, John E; Sharp, Jonathan O

2014-05-01

Recent large-scale beetle infestations have caused extensive mortality to conifer forests resulting in alterations to dissolved organic carbon (DOC) cycling, which in turn can impact metal mobility through complexation. This study analyzed soil-water samples beneath impacted trees in concert with laboratory flow-through soil column experiments to explore possible impacts of the bark beetle infestation on metal release and transport. The columns mimicked field conditions by introducing pine needle leachate and artificial rainwater through duplicate homogenized soil columns and measuring effluent metal (focusing on Al, Cu, and Zn) and DOC concentrations. All three metals were consistently found in higher concentrations in the effluent of columns receiving pine needle leachate. In both the field and laboratory, aluminum mobility was largely correlated with the hydrophobic fraction of the DOC, while copper had the largest correlation with total DOC concentrations. Geochemical speciation modeling supported the presence of DOC-metal complexes in column experiments. Copper soil water concentrations in field samples supported laboratory column results, as they were almost twice as high under grey phase trees than under red phase trees further signifying the importance of needle drop. Pine needle leachate contained high concentrations of Zn (0.1 mg l(-1)), which led to high effluent zinc concentrations and sorption of zinc to the soil matrix representing a future potential source for release. In support, field soil-water samples underneath beetle-impacted trees where the needles had recently fallen contained approximately 50% more zinc as samples from under beetle-impacted trees that still held their needles. The high concentrations of carbon in the pine needle leachate also led to increased sorption in the soil matrix creating the potential for subsequent carbon release. While unclear if manifested in adjacent surface waters, these results demonstrate an increased potential for Zn, Cu, and Al mobility, along with increased deposition of metals and carbon beneath beetle-impacted trees.

A comparison of in situ methods for measuring net nitrogen mineralization rates of organic soil amendments.

PubMed

Hanselman, Travis A; Graetz, Donald A; Obreza, Thomas A

2004-01-01

In situ incubation methods may help provide site-specific estimates of N mineralization from land-applied wastes. However, there are concerns about the reliability of the data generated by the various methods due to containment artifacts. We amended a sandy soil with either poultry manure, biosolids, or yard-waste compost and incubated the mixtures using four in situ methods (buried bags, covered cylinders, standard resin traps, and "new" soil-resin traps) and a conventional laboratory technique in plastic bags. Each incubation device was destructively sampled at 45-d intervals for 180 d and net N mineralization was determined by measuring the amount of inorganic N that accumulated in the soil or soil plus resin traps. Containment effects were evaluated by comparing water content of the containerized soil to a field-reference soil column. In situ incubation methods provided reasonable estimates of short-term (< 45 d) N mineralization, but long-term (> 45 d) mineralization data were not accurate due to a variety of problems specific to each technique. Buried bags and covered cylinders did not retain mineralized N due to water movement into and out of the containers. Neither resin method captured all of the mineralized N that leached through the soil columns, but the new soil-resin trap method tracked field soil water content better than all other in situ methods evaluated. With further refinement and validation, the new soil-resin trap method may be a useful in situ incubation technique for measuring net N mineralization rates of organic soil amendments.

Soil Carbon in North American, Arctic, and Boreal Regions

NASA Astrophysics Data System (ADS)

Lajtha, K.; Bailey, V. L.; Schuur, E.; McGuire, D.; Romanovsky, V. E.

2017-12-01

Globally, soils contain more than 3 times as much as C as the atmosphere and >4 times more C than the world's biota, therefore even small changes in soil C stocks could lead to large changes in the atmospheric concentration of CO2. Since SOCCR-1, improvements have been made in quantifying stocks and uncertainties in stocks of soil C to a depth of 1 m across North America. Estimates for soil carbon stocks in the US (CONUS + Alaska) range from 151 - 162 Pg C, based on extensive sampling and analysis. Estimates for Canada average about 262 Pg C, but sampling is not as extensive. Soil C for Mexico is calculated as 18 Pg C, but there is a great deal of uncertainty surrounding this value. These soil carbon stocks are sensitive to agricultural management, land use and land cover change, and development and loss of C-rich soils such as wetlands. Climate change is a significant threat although may be partially mitigated by increased plant production. Carbon stored in permafrost zone circumpolar soils is equal to 1330-1580 Pg C, almost twice that contained in the atmosphere and about order of magnitude greater than carbon contained in plant biomass, woody debris, and litter in the boreal and tundra biomes combined. Surface air temperature change is amplified in high latitude regions such that Arctic temperature rise is about 2.5 times faster than for the globe as a whole, and thus 5 - 15% of this carbon is considered vulnerable to release to the atmosphere by the year 2100 following the current trajectory of global and Arctic warming. This amount is likely to be up to an order of magnitude larger loss than the increase in carbon stored in plant biomass under the same changing conditions. Models of soil organic matter dynamics have been greatly improved in the last decade by including greater process-level understanding of factors that affect soil C stabilization and destabilization, yet structural features of many models are still limited in representing Arctic and boreal zone processes.

Secondary metabolites and metal content dynamics in Teucrium montanum L. and Teucrium chamaedrys L. from habitats with serpentine and calcareous substrate.

PubMed

Zlatić, Nenad M; Stanković, Milan S; Simić, Zoran S

2017-03-01

The purpose of this comparative analysis is the determination of the total quantity of metals (Mg, Ca, K, Ni, Fe, Mn, Zn, Cu, Cr and Pb) in soil samples, above ground plant parts and tea made of plants Teucrium montanum and T. chamaedrys from different serpentine and calcareous habitats as well as of the total quantity of phenolic compounds and antioxidant activity. The obtained results showed that the quantities of certain metals (Mg, Fe, Ni and Mn) in the soil from the serpentine habitats were greater in comparison with other metals (Ca, Zn and Pb) which were more frequently found in the soil from the calcareous habitats. The results demonstrated that the analysed plant samples from the serpentine habitats contained higher quantity of Fe, Ni and Cr as opposed to the plant samples from the calcareous habitats which contained greater quantity of Ca and Zn. Although the studied species accumulate analysed metals in different quantities, depending on the substrate type, they are not hyperaccumulators of these metals. The use of these species from serpentine habitats for tea preparation is safe to a great extent, because in spite of the determined metal absorption by plant organs, the tea does not contain dangerous quantity of heavy metals. The results showed greater total quantity of phenolic compounds and the higher level of antioxidant activity in the plant samples from serpentine habitats in comparison with the samples from calcareous habitats, which is an indicator of one of the mechanisms of adaptation to the serpentine habitat conditions.

[Change in soil enzymes activities after adding biochar or straw by fluorescent microplate method].

PubMed

Zhang, Yu-Lan; Chen, Li-Jun; Duan, Zheng-Hu; Wu, Zhi-Jie; Sun, Cai-Xia; Wang, Jun-Yu

2014-02-01

The present work was aimed to study soil a-glucosidase and beta-glucosidase activities of and red soils based on fluorescence detection method combined with 96 microplates with TECAN Infinite 200 Multi-Mode Microplate Reader. We added biochar or straw (2.5 g air dry sample/50g air dry soil sample) into and red soils and the test was carried under fixed temperature and humidity condition (25 degrees C, 20% soil moisture content). The results showed that straw addition enhances soil alpha-glucosidase and beta-glucosidase activities, beta-glucosidase activity stimulated by rice straw treatment was higher than that of corn straw treatment, and activity still maintains strong after 40 days, accounting for increasing soil carbon transformation with straw inputting. Straw inputting increased soil nutrients contents and may promote microbial activity, which also lead to the increase oin enzyme Straw inputting increased soil nutrients contents and may promote microbial activity, which also lead to the increase oin enzyme activities. Different effects of straw kinds may be related to material source that needs further research. However, biochar inputting has little effect on soil alpha-glucosidase and beta-glucosidase activity. Biochar contains less available nutrients than straw and have degradation-resistant characteristics. Compared with the conventional spectrophotometric method, fluorescence microplate method is more sensitive to soil enzyme activities in suspension liquid, which can be used in a large number of samples. In brief, fluorescence microplate method is fast, accurate, and simple to determine soil enzymes activities.

CO2 dinamics and priming effect of different Hungarian soils based on laboratory incubation experiment

NASA Astrophysics Data System (ADS)

Zacháry, Dóra; Szalai, Zoltán; Filep, Tibor; Kovács, József; Jakab, Gergely

2017-04-01

Soil processes are particularly important in terms of global carbon cycle, as soils globally contain approximately 2000 Gt carbon, which is higher than the carbon stock of the atmosphere and the terrestrial ecosystem together. Therefore small alterations in the soils' carbon sequestration potential can generate rapid and significant changes in the atmosphere carbon concentration. Soil texture is one of the most important soil parameters which plays a significant role in soil carbon sequestration. Fine textured soils generally considered containing more microbial biomass, and having a lower rate of biomass turnover and organic matter decomposition than coarse textured soils. In spite of this, several recent studies have shown contradicting trends. Our aim was to investigate the influence of the basic soil properties (texture, pH, organic matter content, etc.) on the biological and physicochemical processes determining the soil CO2 emission. Thirteen Hungarian soil samples (depth of 0-20 cm) were incubated during six months. The samples are mainly high clay and organic matter content forest soils, but two forest soils developed on sand were also collected. The soils are derived from C3 forests and C3 croplands from different sites of Hungary. C4 maize residues were added to the soils in order to get natural 13C enrichment for stable isotope measurement purposes and for quantifying the priming effect caused by the crop residue addition. The temperature (20°C) and humidity (70% field capacity) conditions were kept constant in an incubator. The soil respiration was measured at specified intervals (on day 3, 8, 15, 30, 51, 79, 107, 135 and 163) and trapped in 2M NaOH and quantified by titration with 1M HCl. Our first results based on the cumulative CO2 respiration values show positive priming for all type of soils. Results confirm the statement that in certain cases fine textured soils release more CO2. To determine which soil properties influence the most the soil CO2 emission, the linking among the mathematical model parameters and the soil properties would be useful. G. Jakab was supported by the János Bolyai scholarship of the HAS, which is kindly acknowledge.

Thermal volatilization (TV) of different hyperarid Mars like-soils from the Atacama Desert: Implications for the analysis of the Phoenix Mission

NASA Astrophysics Data System (ADS)

Valdivia-Silva, J. E.; Navarro-Gonzalez, R.; McKay, C. P.

2008-09-01

The Phoenix spacecraft will search for organics in the soil and ice in the Martian north polar regions using thermal volatilization (TV) followed by mass spectrometry (MS). This experiment is a combination of a high-temperature furnace and a mass spectrometer that will be use to analyze samples delivered to instrument via a robotic arm. The samples will be heated from ambient to 1000ºC while evolved gases, including organic molecules and fragments, if they are present, will be simultaneously measured by a magnetic sector mass spectrometer (1). Our laboratory has developed a sample characterization method using a pyrolizer integrated to a quadrupole mass spectrometer to support the interpretations of TV data. The Atacama Desert, on northern Chile and southern Peru, has been considered the most arid region over the world (2) and an excellent Mars-like soil analogous (3). These soils contain very low levels to organic matter (10-40 ppm of organic C), and exotic mineralogical composition including iron oxides, which are common characteristics expected on Mars. A previous paper that examined the release of organics from samples soils by flash TV (pyrolisis) coupled to GC-MS (4). This work showed low efficiency of flash TV in soils with low organics or high contents of iron minerals. In addition, other study of agricultural soils showed low correlation between organics concentration and TV response, when levels of total organic matter were below 50000 ppm C or high presence of iron oxides (5). However, the efficiency of gradual heating by TV analysis from hyperarid soils has not been investigated. Here we examine the thermal and evolved gas properties of six types of soils from the two hyperarid core regions from the Atacama Desert: Yungay (northern Chile) and Pampas de La Joya (southern Peru), in order to investigate the effect of soil matrix and low organics contents over TV response. Between 20 to 40 mg of soil was loaded in a capillary quartz tube and it was mounted in the center of platinum coil filament pyrolizer probe. Then sample into de quartz tube was subjected to a thermal treatment from 30°C to 1200°C with a heating rate of 20°C/min. The resulting volatiles evolved from the sample were carried away by helium and transferred into a HP quadrupole mass spectrometer operating in electron ionization mode at 70 eV with a resolution of 1m/z. The mass analyzer was scanned from 10 to 200 m/z at a rate 5.3 scans per second. The nominal sensitivity of the mass analyzer is 0.02 ppb of hexachlorobenzene. Blanks were prepared with no soil added. As expected, there were significant differences in the evolved gas behaviors between soils samples depending of the soil matrix under similar heating conditions. First, the samples belonging to the most arid environments (PE001, PE389) had significant differences compared with less arid soils (PE378, PE386). Carbon in hyperarid soils, in the form of CO2 (ion 44 m/z) began its release to 330±30°C, while the less arid soils to 245±45°C. Volatile ions released from soils during TV-MS analysis were analyzed searching organics fragments. Soil type VI (PE-001), which contains ~11.4 ppm organic C, showed the release of the following mass fragments: 18, 44, 48, 64, and 66. Sources for the release of CO2 in TV analysis of soils comes to oxidation of organic matter (<600ºC), and thermal decomposition of carbonates (>600ºC). Mass 18 originates from water releasing in the course of dehydration processes that is bound in soil minerals, and from oxidation of organics in different temperatures depending the mineral fraction in the soil. The masses 48, 64, and 66 have similar thermal properties, beginning to be released at ~370°C and continue to rise up to 1200°C. These masses are due to the decomposition of sulfates into SO+, SO2 +, and S34O2 +. Mass 66 is detected only if the abundance of mass 64 is very high. TV traces from soils type V (PE-276), type I (PE-361), and type II (PE-388), which contain low organics concentrations (3-23 ppm of organic C), presented similar ions released to soil type VI, but with some variations at times of peak start or maximum release. The TV-MS trace for soil type IV (PE-287) showed the release of the following ions: 16, 18, 36, 44, 48, and 64. In this soil, the mass 44 showed the highest value at >760°C, probably by thermal decomposition of carbonates at higher temperatures; however at 700ºC, CO2 could result from the decomposition oxidation of refractory organics that have been detected by pyrolisis-GC-MS at 750ºC (4). In contrast, the TV-MS trace for sample soil type III (PE-386), which contains 35 ppm of organic C, showed the release of the following major mass fragments (m/z): 18, 30, 36, 44, 48 and 64 (Figure 1). EPSC Abstracts, Vol. 3, EPSC2008-A-00490, 2008 European Planetary Science Congress, Author(s) 2008 Probably, the mass 30 is due to NO that evolves from the thermal oxidation of N-organics at low temperature or degradation of nitrates at high temperatures. Additionally, ion 36 could be due to thermal degradation to chlorides. Our results show interesting ions released from Marslike soils by TV analysis, however soils that have low levels to organic carbon (3-40 ppm), were not detected by this method. If the concentrations of organics in the soils and ice on Mars at the Phoenix landing site are low than 30 ppm, the experiment could fail. Recently, our laboratory investigated the presence of organics in the samples soils by the release of NO (mass 30) at low temperatures using TV-MS (Research submitted). Hence, Phoenix mission could have an option in the searching for organic matter on Mars. These data indicate the importance of the study of Mars-like soils to prevent similar problems in space research.

USGS/EPA collection protocol for bacterial pathogens in soil

USGS Publications Warehouse

Griffin, Dale W.; Shaefer, F.L.; Charlena Bowling,; Dino Mattorano,; Tonya Nichols,; Erin Silvestri,

2014-01-01

This Sample Collection Procedure (SCP) describes the activities and considerations for the collection of bacterial pathogens from representative surface soil samples (0-5 cm). This sampling depth can be reached without the use of a drill rig, direct-push technology, or other mechanized equipment. This procedure can be used in most soil types but is limited to sampling at or near the ground surface. This protocol has components for two different types of sampling applications: (1) typical sampling, when there is no suspicion of contamination (e.g., surveillance or background studies); and (2) in response to known or suspected accidental contamination (e.g., the presence of animal carcasses). This protocol does not cover sampling in response to a suspected bioterrorist or intentional release event. Surface material is removed to the required depth (0-5 cm) and clean trowel or 50 ml sample tube is used to collect the sample. Sample containers are sealed, bagged, and shipped to the laboratory for analysis. Associated documentation, including a Field Data Log and Chain-of-Custody are also included in this document.

Chemistry and Mineralogy of Martian Soils from In-Situ Analyses

NASA Astrophysics Data System (ADS)

Yen, A. S.

2017-12-01

In-situ analyses of typical martian soils by the Spirit, Opportunity and Curiosity rovers have shown remarkable planet-scale similarities in composition. The Alpha Particle X-ray Spectrometer data indicate that fine-grained, basaltic soils analyzed at Gusev Crater, Meridiani Planum and Gale Crater are nearly identical when cross-calibration uncertainties between the individual instruments are considered. Martian soils generally exhibit correlated increases in S, Cl and Zn with finer grain sizes, balanced by decreasing Si and Al from the feldspar component. The trends in S, Cl and Zn are consistent with condensates of volcanic exhalations and indicate minimal aqueous alteration of the soil samples after the accumulation of the volcanic volatiles. The mineralogy established by the CheMin X-ray diffractometer on the Curiosity rover show that soils are dominated by plagioclase feldspar, pyroxenes, olivine, and amorphous material. Minor phases include hematite, magnetite and anhydrite. These results are consistent with the Mössbauer spectrometer data from Spirit and Opportunity which indicate that the iron is contained in olivine, pyroxene, hematite, magnetite, and a nanophase ferric iron oxide/hydroxide. With the exception of the nanophase/amorphous component, typical martian soils are fundamentally basaltic in nature and remain relatively unaltered. Variations from typical basaltic soils have also been observed: Local contributions to the soil are evident in a number of samples which contain characteristic chemical signatures of nearby rocks. Larger sand grains on surfaces of aeolian bedforms have distinct compositions consistent with greater proportions of olivine, and in some cases, magnetite. Extensively altered fine-grained deposits dominated by sulfates and silica at Gusev Crater are distinct from basaltic soils and are consistent with fumarolic origins.

X-ray diffraction results from Mars Science Laboratory: mineralogy of Rocknest at Gale crater.

PubMed

Bish, D L; Blake, D F; Vaniman, D T; Chipera, S J; Morris, R V; Ming, D W; Treiman, A H; Sarrazin, P; Morrison, S M; Downs, R T; Achilles, C N; Yen, A S; Bristow, T F; Crisp, J A; Morookian, J M; Farmer, J D; Rampe, E B; Stolper, E M; Spanovich, N

2013-09-27

The Mars Science Laboratory rover Curiosity scooped samples of soil from the Rocknest aeolian bedform in Gale crater. Analysis of the soil with the Chemistry and Mineralogy (CheMin) x-ray diffraction (XRD) instrument revealed plagioclase (~An57), forsteritic olivine (~Fo62), augite, and pigeonite, with minor K-feldspar, magnetite, quartz, anhydrite, hematite, and ilmenite. The minor phases are present at, or near, detection limits. The soil also contains 27 ± 14 weight percent x-ray amorphous material, likely containing multiple Fe(3+)- and volatile-bearing phases, including possibly a substance resembling hisingerite. The crystalline component is similar to the normative mineralogy of certain basaltic rocks from Gusev crater on Mars and of martian basaltic meteorites. The amorphous component is similar to that found on Earth in places such as soils on the Mauna Kea volcano, Hawaii.

Soil characterisation by bacterial community analysis for forensic applications: A quantitative comparison of environmental technologies.

PubMed

Habtom, Habteab; Demanèche, Sandrine; Dawson, Lorna; Azulay, Chen; Matan, Ofra; Robe, Patrick; Gafny, Ron; Simonet, Pascal; Jurkevitch, Edouard; Pasternak, Zohar

2017-01-01

The ubiquity and transferability of soil makes it a resource for the forensic investigator, as it can provide a link between agents and scenes. However, the information contained in soils, such as chemical compounds, physical particles or biological entities, is seldom used in forensic investigations; due mainly to the associated costs, lack of available expertise, and the lack of soil databases. The microbial DNA in soil is relatively easy to access and analyse, having thus the potential to provide a powerful means for discriminating soil samples or linking them to a common origin. We compared the effectiveness and reliability of multiple methods and genes for bacterial characterisation in the differentiation of soil samples: ribosomal intergenic spacer analysis (RISA), terminal restriction fragment length polymorphism (TRFLP) of the rpoB gene, and five methods using the 16S rRNA gene: phylogenetic microarrays, TRFLP, and high throughput sequencing with Roche 454, Illumina MiSeq and IonTorrent PGM platforms. All these methods were also compared to long-chain hydrocarbons (n-alkanes) and fatty alcohol profiling of the same soil samples. RISA, 16S TRFLP and MiSeq performed best, reliably and significantly discriminating between adjacent, similar soil types. As TRFLP employs the same capillary electrophoresis equipment and procedures used to analyse human DNA, it is readily available for use in most forensic laboratories. TRFLP was optimized for forensic usage in five parameters: choice of primer pair, fluorescent tagging, concentrating DNA after digestion, number of PCR amplifications per sample and number of capillary electrophoresis runs per PCR amplification. This study shows that molecular microbial ecology methodologies are robust in discriminating between soil samples, illustrating their potential usage as an evaluative forensic tool. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

BOREAS TGB-6 Soil Methane Oxidation and Production from NSA BP and Fen Sites

NASA Technical Reports Server (NTRS)

Deck, Bruce; Wahlen, Martin; Hall, Forrest G. (Editor); Conrad, Sara K. (Editor)

2000-01-01

The BOReal Ecosystem-Atmosphere Study Trace Gas Biogeochemistry (BOREAS TGB-6) team collected soil methane measurements at several sites in the Southern Study Area (SSA) and Northern Study Area (NSA). This data set contains soil methane consumption (bacterial CH4 oxidation) and associated C-13 fractionation effects in samples that were collected at various sites in 1994 and 1996 from enclosures (chambers). Methane C-13 data in soil gas samples from the NSA Young Jack Pine (YJP) and Old Jack Pine (OJP) sites for 1994 and 1996 are also given. Additional data on the isotopic composition of methane (carbon and hydrogen isotopes) produced in the NSA beaver ponds and fen bog in 1993 and 1994 are given as well. The data are stored in tabular ASCII files.

Mercury concentrations and distribution in soil, water, mine waste leachates, and air in and around mercury mines in the Big Bend region, Texas, USA

USGS Publications Warehouse

Gray, John E.; Theodorakos, Peter M.; Fey, David L.; Krabbenhoft, David P.

2015-01-01

Samples of soil, water, mine waste leachates, soil gas, and air were collected from areas mined for mercury (Hg) and baseline sites in the Big Bend area, Texas, to evaluate potential Hg contamination in the region. Soil samples collected within 300 m of an inactive Hg mine contained elevated Hg concentrations (3.8–11 µg/g), which were considerably higher than Hg in soil collected from baseline sites (0.03–0.05 µg/g) distal (as much as 24 km) from mines. Only three soil samples collected within 300 m of the mine exceeded the probable effect concentration for Hg of 1.06 µg/g, above which harmful effects are likely to be observed in sediment-dwelling organisms. Concentrations of Hg in mine water runoff (7.9–14 ng/L) were generally higher than those found in springs and wells (0.05–3.1 ng/L), baseline streams (1.1–9.7 ng/L), and sources of drinking water (0.63–9.1 ng/L) collected in the Big Bend region. Concentrations of Hg in all water samples collected in this study were considerably below the 2,000 ng/L drinking water Hg guideline and the 770 ng/L guideline recommended by the U.S. Environmental Protection Agency (USEPA) to protect aquatic wildlife from chronic effects of Hg. Concentrations of Hg in water leachates obtained from leaching of mine wastes varied widely from <0.001 to 760 µg of Hg in leachate/g of sample leached, but only one leachate exceeded the USEPA Hg industrial soil screening level of 31 µg/g. Concentrations of Hg in soil gas collected at mined sites (690–82,000 ng/m3) were highly elevated compared to soil gas collected from baseline sites (1.2–77 ng/m3). However, air collected from mined areas at a height of 2 m above the ground surface contained concentrations of Hg (4.9–64 ng/m3) that were considerably lower than Hg in soil gas from the mined areas. Although concentrations of Hg emitted from mine-contaminated soils and mine wastes were elevated, persistent wind in southwest Texas disperses Hg in the air within a few meters of the ground surface.

Determination of low methylmercury concentrations in peat soil samples by isotope dilution GC-ICP-MS using distillation and solvent extraction methods.

PubMed

Pietilä, Heidi; Perämäki, Paavo; Piispanen, Juha; Starr, Mike; Nieminen, Tiina; Kantola, Marjatta; Ukonmaanaho, Liisa

2015-04-01

Most often, only total mercury concentrations in soil samples are determined in environmental studies. However, the determination of extremely toxic methylmercury (MeHg) in addition to the total mercury is critical to understand the biogeochemistry of mercury in the environment. In this study, N2-assisted distillation and acidic KBr/CuSO4 solvent extraction methods were applied to isolate MeHg from wet peat soil samples collected from boreal forest catchments. Determination of MeHg was performed using a purge and trap GC-ICP-MS technique with a species-specific isotope dilution quantification. Distillation is known to be more prone to artificial MeHg formation compared to solvent extraction which may result in the erroneous MeHg results, especially with samples containing high amounts of inorganic mercury. However, methylation of inorganic mercury during the distillation step had no effect on the reliability of the final MeHg results when natural peat soil samples were distilled. MeHg concentrations determined in peat soil samples after distillation were compared to those determined after the solvent extraction method. MeHg concentrations in peat soil samples varied from 0.8 to 18 μg kg(-1) (dry weight) and the results obtained with the two different methods did not differ significantly (p=0.05). The distillation method with an isotope dilution GC-ICP-MS was shown to be a reliable method for the determination of low MeHg concentrations in unpolluted soil samples. Furthermore, the distillation method is solvent-free and less time-consuming and labor-intensive when compared to the solvent extraction method. Copyright © 2014 Elsevier Ltd. All rights reserved.

Presence and distribution of wastewater-derived pharmaceuticals in soil irrigated with reclaimed water

USGS Publications Warehouse

Kinney, C.A.; Furlong, E.T.; Werner, S.L.; Cahill, J.D.

2006-01-01

Three sites in the Front Range of Colorado, USA, were monitored from May through September 2003 to assess the presence and distribution of pharmaceuticals in soil irrigated with reclaimed water derived from urban wastewater. Soil cores were collected monthly, and 19 pharmaceuticals, all of which were detected during the present study, were measured in 5-cm increments of the 30-cm cores. Samples of reclaimed water were analyzed three times during the study to assess the input of pharmaceuticals. Samples collected before the onset of irrigation in 2003 contained numerous pharmaceuticals, likely resulting from the previous year's irrigation. Several of the selected pharmaceuticals increased in total soil concentration at one or more of the sites. The four most commonly detected pharmaceuticals were erythromycin, carbamazepine, fluoxetine, and diphenhydramine. Typical concentrations of the individual pharmaceuticals observed were low (0.02-15 ??g/kg dry soil). The existence of subsurface maximum concentrations and detectable concentrations at the lowest sampled soil depth might indicate interactions of soil components with pharmaceuticals during leaching through the vadose zone. Nevertheless, the present study demonstrates that reclaimed-water irrigation results in soil pharmaceutical concentrations that vary through the irrigation season and that some compounds persist for months after irrigation. ?? 2006 SETAC.

The Effects of GH Transgenic Goats on the Microflora of the Intestine, Feces and Surrounding Soil.

PubMed

Bao, Zekun; Gao, Xue; Zhang, Qiang; Lin, Jian; Hu, Weiwei; Yu, Huiqing; Chen, Jianquan; Yang, Qian; Yu, Qinghua

2015-01-01

The development of genetically engineered animals has brought with it increasing concerns about biosafety issues. We therefore evaluated the risks of growth hormone from transgenic goats, including the probability of horizontal gene transfer and the impact on the microbial community of the goats' gastrointestinal tracts, feces and the surrounding soil. The results showed that neither the GH nor the neoR gene could be detected in the samples. Moreover, there was no significant change in the microbial community of the gastrointestinal tracts, feces and soil, as tested with PCR-denaturing gradient gel electrophoresis and 16S rDNA sequencing. Finally, phylogenetic analysis showed that the intestinal content, feces and soil samples all contained the same dominant group of bacteria. These results demonstrated that expression of goat growth hormone in the mammary of GH transgenic goat does not influence the microflora of the intestine, feces and surrounding soil.

Superfund Record of Decision (EPA Region 5): Rose Township Cemetery Dump Site, Oakland County, Michigan. (Second remedial action), September 1989. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1989-09-29

The 4-acre Cemetery Dump site is a former sand and gravel pit in Rose Township, Oakland County, Michigan. During the late 1960s or early 1970s, approximately 300 to 600 drums, containing paint sludges, solvents, PCBs, and oils, were illegally dumped and buried onsite. A 1985 Record of Decision (ROD) addressed the soil cleanup which included excavation and offsite disposal of visually-contaminated soil and drum fragments. Soil which was not visually contaminated was sampled and backfilled with clean soil into the excavated areas. Subsequent soil and ground water sampling indicated that zinc contaminants in the ground water exceed the Federal secondarymore » MCL, a nonenforceable standard based on taste and odor, not protection of health. Zinc contamination, however, is most likely a result of monitoring well construction materials. No other contaminants exceed Federal or State environmental standards.« less

Biodegradation kinetics of BTE-OX and MTBE by a diesel-grown biomass.

PubMed

Acuna-Askar, K; de la Torre-Torres, M A; Guerrero-Munoz, M J; Garza-Gonzalez, M T; Chavez-Gomez, B; Rodriguez-Sanchez, I P; Barrera-Saldana, H A

2006-01-01

The biodegradation kinetics of BTE-oX and MTBE, mixed all together in the presence of diesel-grown bioaugmented bacterial populations as high as 885 mg/L VSS, was evaluated. The effect of soil in aqueous samples and the effect of Tergitol NP-10 on substrate biodegradation rates were also evaluated. Biodegradation kinetics was evaluated for 54 h, every 6 h. All BTE-oX chemicals followed a first-order two-phase biodegradation kinetic model, whereas MTBE followed a zero-order removal kinetic model in all samples. BTE-oX removal rates were much higher than those of MTBE in all samples. The presence of soil in aqueous samples retarded BTE-oX and MTBE removal rates. The addition of Tergitol NP-10 to aqueous samples containing soil had a positive effect on substrate removal rate in all samples. Substrate percent removals ranged between 64.8-98.9% for benzene, toluene and ethylbenzene. O-xylene and MTBE percent removals ranged between 18.7-40.8% and 7.2-10.3%, respectively.

Microbial effects on two tropical soils amended with different types of biochar

NASA Astrophysics Data System (ADS)

Paz, Jorge; Méndez, Ana; Fun, Shenglei; Gascó, Gabriel

2013-04-01

There is an increasing interest in using biochar as soil amendment due to its potential to reduce greenhouse gas emissions from soils and to mitigate heavy metal pollution. In addition, sometimes biochar has been found to increase soil productivity due to its favourable effect on soil aggregation and water holding capacity. However, results obtained can differ greatly depending on the type of biochar utilised. On the other hand, the response of the microbial community to biochar addition is not so well understood. In our experiment we have sampled two soils, differing in their fertility status. A greenhouse pot experiment was established to see the effect of adding four different biochars, differing on their feedstock (Miscanthus, sewage sludge, paper mill waste and pinewood). Additionally, half of the samples excluded soil earthworms, while the other half had 3 individuals of the earthworm Pontoscolex corethrurus. Pots, containing 400 g of soil, were planted with proso millet. Assessed parameters included millet height, soil microbial biomass and soil enzymatic activity related to different biogeochemical cycles (invertase, B-glucosaminidase, B-glucosidase, urease, phosphomonoesterase, arylsulphatase) The effects of biochar on soil biological properties depended on the type of feedstock used for biochar production and pre-existent soil parameters such as soil fertility status. Earthworm presence generally had a positive effect on soil microbial properties.

INTEGRITY OF VOA-VIAL SEALS

EPA Science Inventory

Preservation of soil samples for the analysis of volatile organic compounds (VOCs) requires both the inhibition of VOC degradation and the restriction of vapor movement in or out of the sample container. Clear, 40,mL glass VOA vials manufactured by the four major U.S. glass manu...

Determination of 13 endocrine disrupting chemicals in environmental solid samples using microwave-assisted solvent extraction and continuous solid-phase extraction followed by gas chromatography-mass spectrometry.

PubMed

Azzouz, Abdelmonaim; Ballesteros, Evaristo

2016-01-01

Soil can contain large numbers of endocrine disrupting chemicals (EDCs). The varied physicochemical properties of EDCs constitute a great challenge to their determination in this type of environmental matrix. In this work, an analytical method was developed for the simultaneous determination of various classes of EDCs, including parabens, alkylphenols, phenylphenols, bisphenol A, and triclosan, in soils, sediments, and sewage sludge. The method uses microwave-assisted extraction (MAE) in combination with continuous solid-phase extraction for determination by gas chromatography-mass spectrometry. A systematic comparison of the MAE results with those of ultrasound-assisted and Soxhlet extraction showed MAE to provide the highest extraction efficiency (close to 100%) in the shortest extraction time (3 min). The proposed method provides a linear response over the range 2.0 - 5000 ng kg(-1) and features limits of detection from 0.5 to 4.5 ng kg(-1) depending on the properties of the EDC. The method was successfully applied to the determination of target compounds in agricultural soils, pond and river sediments, and sewage sludge. The sewage sludge samples were found to contain all target compounds except benzylparaben at concentration levels from 36 to 164 ng kg(-1). By contrast, the other types of samples contained fewer EDCs and at lower concentrations (5.6 - 84 ng kg(-1)).

Elemental Analysis of Soils by Laser Induced Breakdown Spectroscopy

NASA Astrophysics Data System (ADS)

Gondal, Mohammed Ashraf; Dastageer, Mohamed A.

The chemical and elemental composition of soil is very complex as it contains many constituents like minerals, organic matters, living organisms, fossils, air and water. Considering the diversity of soil contents, quality and usability, a systematic scientific study on the elemental and chemical composition of soil is very important. In order to study the chemical composition of soil, Laser induced breakdown spectroscopy (LIBS) has been applied recently. The important features of LIBS system and its applications for the measurement of nutrients in green house soil, on-line monitoring of remediation process of chromium polluted soil, determination of trace elements in volcanic erupted soil samples collected from ancient cenozoic lava eruption sites and detection of toxic metals in Gulf war oil spill contaminated soil using LIBS are described in this chapter.

Preparation of DNA-containing extract for PCR amplification

DOEpatents

Dunbar, John M.; Kuske, Cheryl R.

2006-07-11

Environmental samples typically include impurities that interfere with PCR amplification and DNA quantitation. Samples of soil, river water, and aerosol were taken from the environment and added to an aqueous buffer (with or without detergent). Cells from the sample are lysed, releasing their DNA into the buffer. After removing insoluble cell components, the remaining soluble DNA-containing extract is treated with N-phenacylthiazolium bromide, which causes rapid precipitation of impurities. Centrifugation provides a supernatant that can be used or diluted for PCR amplification of DNA, or further purified. The method may provide a DNA-containing extract sufficiently pure for PCR amplification within 5–10 minutes.

Analytical methods of the U.S. Geological Survey's New York District Water-Analysis Laboratory

USGS Publications Warehouse

Lawrence, Gregory B.; Lincoln, Tricia A.; Horan-Ross, Debra A.; Olson, Mark L.; Waldron, Laura A.

1995-01-01

The New York District of the U.S. Geological Survey (USGS) in Troy, N.Y., operates a water-analysis laboratory for USGS watershed-research projects in the Northeast that require analyses of precipitation and of dilute surface water and soil water for major ions; it also provides analyses of certain chemical constituents in soils and soil gas samples.This report presents the methods for chemical analyses of water samples, soil-water samples, and soil-gas samples collected in wateshed-research projects. The introduction describes the general materials and technicques for each method and explains the USGS quality-assurance program and data-management procedures; it also explains the use of cross reference to the three most commonly used methods manuals for analysis of dilute waters. The body of the report describes the analytical procedures for (1) solution analysis, (2) soil analysis, and (3) soil-gas analysis. The methods are presented in alphabetical order by constituent. The method for each constituent is preceded by (1) reference codes for pertinent sections of the three manuals mentioned above, (2) a list of the method's applications, and (3) a summary of the procedure. The methods section for each constitutent contains the following categories: instrumentation and equipment, sample preservation and storage, reagents and standards, analytical procedures, quality control, maintenance, interferences, safety considerations, and references. Sufficient information is presented for each method to allow the resulting data to be appropriately used in environmental investigations.

Phosphatase activity in Antarctica soil samples as a biosignature of extant life

NASA Astrophysics Data System (ADS)

Sato, Shuji; Itoh, Yuki; Takano, Yoshinori; Fukui, Manabu; Kaneko, Takeo; Kobayashi, Kensei

Microbial activities have been detected in such extreme terrestrial environments as deep lithosphere, a submarine hydrothermal systems, stratosphere, and Antarctica. Microorganisms have adapted to such harsh environments by evolving their biomolecules. Some of these biomolecules such as enzymes might have different characteristics from those of organisms in ordinary environments. Many biosignatures (or biomarkers) have been proposed to detect microbial activities in such extreme environments. A number of techniques are proposed to evaluate biological activities in extreme environments including cultivation methods, assay of metabolism, and analysis of bioorganic compounds like amino acids and DNA. Enzyme activities are useful signature of extant life in extreme environments. Among many enzymes, phosphatase could be a good indicator of biological activities, since phosphate esters are essential for all the living terrestrial organisms. In addition, alkaline phosphatase is known as a typical zinc-containing metalloenzyme and quite stable in environments. We analyzed phosphatase activities in Antarctica soil samples to see whether they can be used as biosignatures for extant life. In addition, we characterized phosphatases extracted from the Antarctica soil samples, and compared with those obtained from other types of environments. Antarctica surface environments are quite severe environments for life since it is extremely cold and dry and exposed to strong UV and cosmic rays. We tried to evaluate biological activities in Antarctica by measuring phosphatase activities. Surface soil samples are obtained at the Sites 1-8 near Showa Base in Antarctica during the 47th Japan Antarctic exploration mission in 2005-6. Activities of acid phosphatase (ACP) and alkaline phosphatase (ALP) are measured spectrophotometrically after mixing the powdered sample and p-nitrophenyl phosphate solution (pH 6.5 for ACP, pH 8.0 for ALP). ALP was characterized after extraction from soils with Tris-HCl buffer (pH 9.0), where the activity was measured fluorometrically with 4-methylumbelliferyl phosphate (pH 8.0) as a substance. The soil of Site 8 (near a penguin rookery) showed almost the same level of ACP and ALP activities as usual surface soil sampled in YNU campus, while the soil of Sites 1-7 showed much less activities. ALP in the extract from the soil of Site 8 was characterized. It showed the maximal at 338 K, while ALP from the campus soil showed the maximal at 358 K. Gel filtration chromatography showed that the ALP activity was found only in the fraction whose molecular weights were over 60000. The ALP activity was diminished with EDTA and was recovered with addition of zinc ion. The present results showed that zinc-containing metalloenzymes, which had lower optimum temperature than those in usual environments, are present in Antarctica soil. It was suggested that phosphatases are good bio-signatures for extant life in extreme environments.

Laser fluorometric analysis of plants for uranium exploration

USGS Publications Warehouse

Harms, T.F.; Ward, F.N.; Erdman, J.A.

1981-01-01

A preliminary test of biogeochemical exploration for locating uranium occurrences in the Marfa Basin, Texas, was conducted in 1978. Only 6 of 74 plant samples (mostly catclaw mimosa, Mimosa biuncifera) contained uranium in amounts above the detection limit (0.4 ppm in the ash) of the conventional fluorometric method. The samples were then analyzed using a Scintrex UA-3 uranium analyzer* * Use of trade names in this paper is for descriptive purposes only and does not constitute endorsement by the U.S. Geological Survey. - an instrument designed for direct analysis of uranium in water, and which can be conveniently used in a mobile field laboratory. The detection limit for uranium in plant ash (0.05 ppm) by this method is almost an order of magnitude lower than with the fluorometric conventional method. Only 1 of the 74 samples contained uranium below the detection limit of the new method. Accuracy and precision were determined to be satisfactory. Samples of plants growing on mineralized soils and nonmineralized soils show a 15-fold difference in uranium content; whereas the soils themselves (analyzed by delayed neutron activation analysis) show only a 4-fold difference. The method involves acid digestion of ashed tissue, extraction of uranium into ethyl acetate, destruction of the ethyl acetate, dissolution of the residue in 0.005% nitric acid, and measurement. ?? 1981.

Removal of polycyclic aromatic hydrocarbons from soil using a composite material containing iron and activated carbon in the freeze-dried calcium alginate matrix: Novel soil cleanup technique.

PubMed

Funada, Mako; Nakano, Takeshi; Moriwaki, Hiroshi

2018-06-05

A novel clean-up technology to remove polycyclic aromatic hydrocarbons (PAHs) from solid samples by magnetic separation using a composite containing iron powder as a magnetic material and activated carbon as an adsorbent in the freeze-dried calcium alginate matrix (Fe-AC-alg) has been developed. The Fe-AC-alg powder (50 mg), mixed with 1.0 g of glass beads having 12 kinds of adsorbed PAHs, was shaken without adding solvents at 300 rpm. After shaking, the Fe-AC-alg powder was separated using a permanent magnet. The quantity of the PAHs extracted from the glass beads treated by this method was determined. The removal (%) of the PAHs was over 96%. A roadside soil sample (10 g) was mixed with the Fe-AC-alg (1.0 g) for 2 weeks. The removal (%) of benzo[a]pyrene from the sample by the presented technique was 78%. The toxic equivalent concentration (Σ BaP eq ) for the sample decreased from 0.27 to 0.10 mg kg -1 by this method. The presented method is very simple, economical, and environment-friendly. Copyright © 2018 Elsevier B.V. All rights reserved.

Dissolved organic carbon concentrations and compositions, and trihalomethane formation potentials in waters from agricultural peat soils, Sacramento-San Joaquin Delta, California; implications for drinking-water quality

USGS Publications Warehouse

Fujii, Roger; Ranalli, Anthony J.; Aiken, George R.; Bergamaschi, Brian A.

1998-01-01

Water exported from the Sacramento-San Joaquin River delta (Delta) is an important drinking-water source for more than 20 million people in California. At times, this water contains elevated concentrations of dissolved organic carbon and bromide, and exceeds the U.S. Environmental Protection Agency's maximum contaminant level for trihalomethanes of 0.100 milligrams per liter if chlorinated for drinking water. About 20 to 50 percent of the trihalomethane precursors to Delta waters originates from drainage water from peat soils on Delta islands. This report elucidates some of the factors and processes controlling and affecting the concentration and quality of dissolved organic carbon released from peat soils and relates the propensity of dissolved organic carbon to form trihalomethanes to its chemical composition.Soil water was sampled from near-surface, oxidized, well-decomposed peat soil (upper soil zone) and deeper, reduced, fibrous peat soil (lower soil zone) from one agricultural field in the west central Delta over 1 year. Concentrations of dissolved organic carbon in the upper soil zone were highly variable, with median concentrations ranging from 46.4 to 83.2 milligrams per liter. Concentrations of dissolved organic carbon in samples from the lower soil zone were much less variable and generally slightly higher than samples from the upper soil zone, with median concentrations ranging from 49.3 to 82.3 milligrams per liter. The dissolved organic carbon from the lower soil zone had significantly higher aromaticity (as measured by specific ultraviolet absorbance) and contained significantly greater amounts of aromatic humic substances (as measured by XAD resin fractionation and carbon-13 nuclear magnetic resonance analysis of XAD isolates) than the dissolved organic carbon from the upper soil zone. These results support the conclusion that more aromatic forms of dissolved organic carbon are produced under anaerobic conditions compared to aerobic conditions. Dissolved organic carbon concentration, trihalomethane formation potential, and ultraviolet absorbance were all highly correlated, showing that trihalomethane precursors increased with increasing dissolved organic carbon and ultraviolet absorbance for whole water samples. Contrary to the generally accepted conceptual model for trihalomethane formation that assumes that aromatic forms of carbon are primary precursors to trihalomethanes, results from this study indicate that dissolved organic carbon aromaticity appears unrelated to trihalomethane formation on a carbon-normalized basis. Thus, dissolved organic carbon aromaticity alone cannot fully explain or predict trihalomethane precursor content, and further investigation of aromatic and nonaromatic forms of carbon will be needed to better identify trihalomethane precursors.

Content and distribution of arsenic, bismuth, lithium and selenium in mineral and synthetic fertilizers and their contribution to soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Senesi, N.; Polemio, M.; Lorusso, L.

1979-01-01

Concentrations of arsenic, bismuth, lithium and selenium were determined by atomic absorption spectrophotometry in 32 samples of commercial fertilizers from various manufacturers and distributors. Arsenic and lithium were detected in all investigated samples, bismuth in 50% of samples and selenium only in two samples. Arsenic content ranged from 2 to 321 ppM; lithium varied from 5 to 0.1 ppM; bismuth was always lower than 0.5 ppM; selenium was detectable at the levels of 10 and 13 ppM. Fertilizers made from rock phosphates contained trace element amounts generally higher than those derived from rock carbonates, synthetic nitrogen fertilizers and potassium sulphate.more » Additions of trace elements from fertilizers applied at common rates to cultivated soils are tabulated and discussed on the basis of the natural soil reserves and toxicity levels for plants. Whereas applications of bismuth resulted always very low to influence the usual soil content and plant uptakes and selenium was only rarely present in fertilizers, lithium and moreover arsenic additions by fertilizers could influence the trace element status in soil, overcoming occasionally the toxicity levels for more sensitive crops.« less

Lead identification in soil surrounding a used lead acid battery smelter area in Banten, Indonesia

NASA Astrophysics Data System (ADS)

Adventini, N.; Santoso, M.; Lestiani, D. D.; Syahfitri, W. Y. N.; Rixson, L.

2017-06-01

A used lead acid battery smelter generates particulates containing lead that can contaminate the surrounding environment area. Lead is a heavy metal which is harmful to health if it enters the human body through soil, air, or water. An identification of lead in soil samples surrounding formal and informal used lead acid battery smelters area in Banten, Indonesia using EDXRF has been carried out. The EDXRF accuracy and precision evaluated from marine sediment IAEA 457 gave a good agreement to the certified value. A number of 16 soil samples from formal and informal areas and 2 soil samples from control area were taken from surface and subsurface soils. The highest lead concentrations from both lead smelter were approximately 9 folds and 11 folds higher than the reference and control samples. The assessment of lead contamination in soils described in Cf index was in category: moderately and strongly polluted by lead for formal and informal lead smelter. Daily lead intake of children in this study from all sites had exceeded the recommended dietary allowance. The HI values for adults and children living near both lead smelter areas were greater than the value of safety threshold 1. This study finding confirmed that there is a potential health risk for inhabitants surrounding the used lead acid battery smelter areas in Banten, Indonesia.

[Citrus boron nutrient level and its impact factors in the Three Gorges Reservoir region of Chongqing, China].

PubMed

Zhou, Wei; Peng, Liang-Zhi; Chun, Chang-Pin; Jiang, Cai-Lun; Ling, Li-Li; Wang, Nan-Qi; Xing, Fei; Huang, Yi

2014-04-01

To investigate the level of boron nutrient in citrus and its impact factors, a total of 954 citrus leaf samples and 302 soil samples were collected from representative orchards in the 12 main citrus production counties in the Three Gorges Reservoir region of Chongqing to determine the boron content in citrus leaves, as well as the relationships between leaf boron content with soil available boron content, soil pH value, cultivar, rootstock and the age of tree. Results indicated that the leaf samples from 41.6% orchards (< 35 mg x kg(-1)) and the soil samples from 89.4% orchards (< 0.5 mg x kg(-1)) were boron insufficient. The correlation of leaf boron content and soil available boron content was not significant. The soil pH, cultivar, rootstock and the age of tree did affect the leaf boron content. The leaves from the orchards with soil pH of 4.5-6.4 demonstrated significantly higher boron contents than with the soil pH of 6.5-8.5. The leaf boron contents in the different cultivars was ranged as Satsuma mandarin > pomelo > valencia orange > sweet orange > tangor > navel orange. The citrus on trifoliate orange and sour pomelo rootstocks had significantly higher leaf boron contents than on Carrizo citrange and red tangerine rootstocks. Compared with the adult citrus trees (above 8 year-old), 6.6% more of leaf samples of younger trees (3 to 8 year-old) contained boron contents in the optimum range (35-100 mg x kg(-1)).

Somatic mutation frequencies in the stamen hairs of Tradescantia grown in soil samples from the Bikini Island.

PubMed

Ichikawa, S; Ishii, C

1991-02-01

Somatic pink mutation frequencies in the stamen hairs of Tradescantia BNL 02 clone grown for 76 days in two soil samples taken from the Bikini Island (where a hydrogen bomb explosion test had been conducted in 1954) were investigated. A significantly high mutation frequency (2.58 +/- 0.17 pink mutant events per 10(3) hairs or 1.34 +/- 0.09 pink mutant events per 10(4) hair-cell divisions) was observed for the plant grown in one of the two Bikini soil samples, as compared to the control plants (1.70 +/- 0.14 or 0.88 +/- 0.07, respectively) grown in the field soil of Saitama University. The soil sample which caused the significant increase in mutation frequency contained 6,880 +/- 330 mBq/g 137Cs, 62.5 +/- 4.4 mBq/g 60Co, and some other nuclides; a 150 microR/hr exposure rate being measured on the surface of the soil sample. The effective cumulative external exposures measured for the inflorescences of the plant grown in this soil sample averaged at most 60.8 mR, being too small to explain the significant elevation in mutation frequency observed. On the other hand, internal exposure due to uptake of radioactive nuclides was estimated to be 125 mrad (1.25 mGy) as an accumulated effective dose, mainly based on a gamma-spectrometrical analysis. However, it seemed highly likely that this value of internal exposure was a considerable underestimate, and the internal exposure was considered to be more significant than the external exposure.

Process for the solvent extraction for the radiolysis and dehalogenation of halogenated organic compounds in soils, sludges, sediments and slurries

DOEpatents

Golden, Jeffry

2007-02-13

A process of extracting halogenated organic compounds, and particularly PCBs, from soil, sediment, slurry, sludge and dehalogenating the compounds contacts a contaminated soil sample with an extraction medium of a mixture of an alkane and a water miscible alcohol. The organic compounds dissolve in the extraction medium which is separated from the soil by passing water upwardly through the soil. The extraction medium floats to the surface of the water and is separated. Thereafter, the extraction medium containing the halogenated organic contaminants is subjected to ionizing radiation to radiolytically dehalogenate the compounds.

Process for the solvent extraction for the radiolysis and dehalogenation of halogenated organic compounds in soils, sludges, sediments and slurries

DOEpatents

Mincher, Bruce J.; Curry, Randy Dale; Clevenger, Thomas E.; Golden, Jeffry

2003-05-27

A process of extracting halogenated organic compounds, and particularly PCBs, from soil, sediment, slurry, sludge and dehalogenating the compounds contacts a contaminated soil sample with an extraction medium of a mixture of an alkane and a water miscible alcohol. The organic compounds dissolve in the extraction medium which is separated from the soil by passing water upwardly through the soil. The extraction medium floats to the surface of the water and is separated. Thereafter, the extraction medium containing the halogenated organic contaminants is subjected to ionizing radiation to radiolytically dehalogenate the compounds.

Process for the solvent extraction for the radiolysis and dehalogenation of halogenated organic compounds in soils, sludges, sediments and slurries

DOEpatents

Mincher, Bruce J.; Curry, Randy Dale; Clevenger, Thomas E.; Golden, Jeffry

2000-01-01

A process of extracting halogenated organic compounds, and particularly PCBs, from soil, sediment, slurry, sludge and dehalogenating the compounds contacting a contaminated soil sample with an extraction medium of a mixture of an alkane and a water miscible alcohol. The organic compounds dissolve in the extraction medium which is separated from the soil by passing water upwardly through the soil. The extraction medium floats to the surface of the water and is separated. Thereafter, the extraction medium containing the halogenated organic contaminants is subjected to ionizing radiation to radiolytically dehalogenate the compounds.

Effects of sewage sludge amendment on the properties of two Brazilian oxisols and their humic acids.

PubMed

Bertoncini, E I; D'Orazio, V; Senesi, N; Mattiazzo, M E

2008-07-01

The effect of sewage sludge (SS) amendment on the general properties of the top layers of a sandy and a clayey oxisols and on the nature of their humic acid (HA) fractions was evaluated by chemical and physico-chemical techniques. The amended soils, especially the sandy soil, benefited of SS amendment by increasing their pH to above neutrality and enhancing the contents of C, N, P, and Ca and cation exchange capacity. The SS-HA-like sample showed larger H and N contents and a greater aliphatic character and humification degree than the HAs isolated from non-amended soils. The composition and structure of amended soil HAs were affected by SS application as a function of soil type and layer. In particular, N-containing groups and aliphatic structures of SS-HA-like sample appears to be partially incorporated in the amended soil HAs, and these effects were more evident in the HAs from the sandy oxisol.

Distribution of Heavy Metals in the Soils Associated with the Commonly Used Pesticides in Cotton Fields

PubMed Central

Shafiq, Musharaf; Chotana, Ghayoor Abbas

2016-01-01

Agricultural soils contain both heavy metals and pesticides originating from various agricultural practices. It is quite important to study the relationships between these two classes of compounds. To accomplish this, 52 soil samples were collected from cotton fields and analyzed for their metal contents (Ni, Cu, Co, Pb, Cr, and Cd) and levels of most commonly used pesticides (imidacloprid, acetamiprid, and emamectin). FAAS was used for metal estimation and the pesticides were determined by HPLC equipped with UV detector. The results of the study revealed slightly enhanced levels of Ni and Cd in these samples while the rest of the metals were present within tolerable range. Acetamiprid residues in soil were strongly positively correlated with Cu and negatively correlated with Cr. Similarly, imidacloprid in soil was negatively correlated with Ni. Thus it was evidenced that Cu stabilizes acetamiprid while Cr and Ni facilitate the degradation of acetamiprid and imidacloprid in the soil. PMID:27051560

Ferrihydrite in soils

NASA Astrophysics Data System (ADS)

Vodyanitskii, Yu. N.; Shoba, S. A.

2016-07-01

Ferrihydrite—an ephemeral mineral—is the most active Fe-hydroxide in soils. According to modern data, the ferrihydrite structure contains tetrahedral lattice in addition to the main octahedral lattice, with 10-20% of Fe being concentrated in the former. The presence of Fe tetrahedrons influences the surface properties of this mineral. The chemical composition of ferrihydrite samples depends largely on the size of lattice domains ranging from 2 to 6 nm. Chemically pure ferrihydrite rarely occurs in the soil; it usually contains oxyanion (SiO14 4-, PO4 3-) and cation (Al3+) admixtures. Aluminum replace Fe3+ in the structure with a decrease in the mineral particle size. Oxyanions slow down polymerization of Fe3+ aquahydroxomonomers due to the films at the surface of mineral nanoparticles. Si- and Al-ferrihydrites are more resistant to the reductive dissolution than the chemically pure ferrihydrite. In addition, natural ferrihydrite contains organic substance that decreases the grain size of the mineral. External organic ligands favor ferrihydrite dissolution. In the European part of Russia, ferrihydrite is more widespread in the forest soils than in the steppe soils. Poorly crystallized nanoparticles of ferrihydrite adsorb different cations (Zn, Cu) and anions (phosphate, uranyl, arsenate) to immobilize them in soils; therefore, ferrihydrite nanoparticles play a significant role in the biogeochemical cycle of iron and other elements.

Phosphorus mitigation during springtime runoff by amendments applied to grassed soil.

PubMed

Uusi-Kämppä, J; Turtola, E; Närvänen, A; Jauhiainen, L; Uusitalo, R

2012-01-01

Permanent grass vegetation on sloping soils is an option to protect fields from erosion, but decaying grass may liberate considerable amounts of dissolved reactive P (DRP) in springtime runoff. We studied the effects of freezing and thawing of grassed soil on surface runoff P concentrations by indoor rainfall simulations and tested whether the peak P concentrations could be reduced by amending the soil with P-binding materials containing Ca or Fe. Forty grass-vegetated soil blocks (surface area 0.045 m, depth 0.07 m) were retrieved from two permanent buffer zones on a clay and loam soil in southwest Finland. Four replicates were amended with either: (i) gypsum from phosphoric acid processing (CaSO × 2HO, 6 t ha), (ii) chalk powder (CaCO, 3.3 t ha), (iii) Fe-gypsum (6 t ha) from TiO processing, or (iv) granulated ferric sulfate (Fe[SO], 0.7 t ha), with four replicates serving as untreated controls. Rainfall (3.3 h × 5 mm h) was applied on presaturated samples set at a slope of 5% and the surface runoff was analyzed for DRP, total dissolved P (TDP), total P (TP), and suspended solids. Rainfall simulation was repeated twice after the samples were frozen. Freezing and thawing of the samples increased the surface runoff DRP concentration of the control treatment from 0.19 to 0.46 mg L, up to 2.6-3.7 mg L, with DRP being the main P form in surface runoff. Compared with the controls, surface runoff from soils amended with Fe compounds had 57 to 80% and 47 to 72% lower concentrations of DRP and TP, respectively, but the gypsum and chalk powder did not affect the P concentrations. Thus, amendments containing Fe might be an option to improve DRP retention in, e.g., buffer zones. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Floodplain Assessment for the Middle Los Alamos Canyon Aggregate Area Investigations in Technical Area 02 at Los Alamos National Laboratory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hathcock, Charles Dean

The proposed action being assessed in this document occurs in TA-02 in the bottom of Los Alamos Canyon. The DOE proposes to conduct soil sampling at AOC 02-011 (d), AOC 02- 011(a)(ii), and SWMU 02-005, and excavate soils in AOC 02-011(a)(ii) as part of a corrective actions effort. Additional shallow surface soil samples (soil grab samples) will be collected throughout the TA-02 area, including within the floodplain, to perform ecotoxicology studies (Figures 1 and 2). The excavation boundaries in AOC 02-011(a)(ii) are slightly within the delineated 100-year floodplain. The project will use a variety of techniques for soil sampling andmore » remediation efforts to include hand/digging, standard hand auger/sampling, excavation using machinery such as backhoe and front end loader and small drill rig. Heavy equipment will traverse the floodplain and spoils piles will be staged in the floodplain within developed or previously disturbed areas (e.g., existing paved roads and parking areas). The project will utilize and maintain appropriate best management practices (BMPs) to contain excavated materials, and all pollutants, including oil from machinery/vehicles. The project will stabilize disturbed areas as appropriate at the end of the project.« less

Soil analyses for 1,3-dichloropropene (1,3-DCP), sodium n-methyldithiocarbamate (metam-sodium), and their degradation products near Fort Hall Idaho, September 1999 through March 2000

USGS Publications Warehouse

Parliman, D.J.

2001-01-01

Between September 1999 and March 2000, soil samples from the Fort Hall, Idaho, area were analyzed for two soil fumigants, 1,3-dichloropropene (1,3-DCP) and sodium n-methyldithiocarbamate (metam-sodium), and their degradation products. Ground water is the only source of drinking water at Fort Hall, and the purpose of the investigation was to determine potential risk of ground-water contamination from persistence and movement of these pesticides in cropland soils. 1,3-DCP, metam-sodium, or their degradation products were detected in 42 of 104 soil samples. The samples were collected from 1-, 2-, and 3-foot depths in multiple backhoe trenches during four sampling events—before pesticide application in September; after application in October; before soil freeze in December; and after soil thaw in March. In most cases, concentrations of the pesticide compounds were at or near their laboratory minimum reporting limits. U.S. Environmental Protection Agency Method 5035 was used as the guideline for soil sample preparation and analyses, and either sodium bisulfate (NaHSO4), an acidic preservative, or pesticide-free water was added to samples prior to analyses. Addition of NaHSO4 to the samples resulted in a greater number of compound detections, but pesticide-free water was added to most samples to avoid the strong reactions of soil carbonate minerals with the NaHSO4. As a result, nondetection of compounds in samples containing pesticide-free water did not necessarily indicate that the compounds were absent. Detections of these compounds were inconsistent among trenches with similar soil characteristics and histories of soil fumigant use. Compounds were detected at different depths and different trench locations during each sampling event. Overall results of this study showed that the original compounds or their degradation products can persist in soil 6 months or more after their application and are present to at least 3 feet below land surface in some areas. A few of the soil analyses results were unexpected. Degradation products of metam-sodium were detected in samples from croplands with a history of 1,3-DCP applications only, and were not detected in samples from croplands with a history of metam-sodium applications. Although 1,2-dibromoethane (EDB) has not been used in the area for many years, EDB was detected in a few soil samples. The presence of EDB in soil could be caused by irrigation of croplands with EDBcontaminated ground water. Analyses of these soil samples resulted in many unanswered questions, and further studies are needed. One potential study to determine vertical extent of pesticide compound migration in sediments, for example, would include analysis of one or more columns of soil and sediments (land surface to ground water, about 35 to 50 feet below land surface) in areas with known soil contamination. Another study would expand the scope of soil contamination to include broader types of cropland conditions and compound analyses.

SEPARATION AND ISOLATION OF VOLATILE ORGANIC COMPOUNDS USING VACUUM DISTILLATION WITH GC/MS DETERMINATION

EPA Science Inventory

Vacuum distillation of water, soil, oil, and fish samples is presented as an alternative technique for determining volatile organic compounds (VOCs). Analyses of samples containing VOCs and non-VOCs at 50ppb concentrations were performed to evaluate method limitations. Analyte re...

Health risk assessment of heavy metals in soil-plant system amended with biogas slurry in Taihu basin, China.

PubMed

Bian, Bo; Lin, Cheng; Lv, Lin

2016-09-01

Biogas slurry is a product of anaerobic digestion of manure that has been widely used as a soil fertilizer. Although the use for soil fertilizer is a cost-effective solution, it has been found that repeated use of biogas slurry that contains high heavy metal contents can cause pollution to the soil-plant system and risk to human health. The objective of this study was to investigate effects of biogas slurry on the soil-plant system and the human health. We analyzed the heavy metal concentrations (including As, Pb, Cu, Zn, Cr and Cd) in 106 soil samples and 58 plant samples in a farmland amended with biogas slurry in Taihu basin, China. Based on the test results, we assessed the potential human health risk when biogas slurry containing heavy metals was used as a soil fertilizer. The test results indicated that the Cd and Pb concentrations in soils exceeded the contamination limits and Cd exhibited the highest soil-to-root migration potential. Among the 11 plants analyzed, Kalimeris indica had the highest heavy metal absorption capacity. The leafy vegetables showed higher uptake of heavy metals than non-leafy vegetables. The non-carcinogenic risks mainly resulted from As, Pb, Cd, Cu and Zn through plant ingestion exposure. The integrated carcinogenic risks were associated with Cr, As and Cd in which Cr showed the highest risk while Cd showed the lowest risk. Among all the heavy metals analyzed, As and Cd appeared to have a lifetime health threat, which thus should be attenuated during production of biogas slurry to mitigate the heavy metal contamination.

Relationships between groundwater, surface water, and soil salinity in Polder 32, Southwest Bangladesh

NASA Astrophysics Data System (ADS)

Fry, D. C.; Ayers, J. C.

2014-12-01

In the coastal areas of Southwest Bangladesh polders are surrounded by tidal channels filled with brackish water. In the wet season, farmers create openings in the embankments to irrigate rice paddies. In the dry season, farmers do the same to create saline shrimp ponds. Residents on Polder 32, located within the Ganges-Brahmaputra-Meghna delta system, practice these seasonal farming techniques. Soils in the area are entisols, being sediment recently deposited, and contain mostly silt-sized particles. Brackish water in brine shrimp ponds may deposit salt in the soil, causing soil salinization. However, saline connate groundwater could also be contributing to soil salinization. Groundwater, surface water (fresh water pond, rice paddy and tidal channel water) and soil samples have been analyzed via inductively coupled plasma optical emission spectroscopy, inductively coupled plasma mass spectroscopy and ion chromatography in an attempt to correlate salinity measurements with each other in order to determine major sources of soil salinity. Multiple parameters, including distances of samples from tidal channels, inland streams, shrimp ponds and tube wells were measured to see if spatial correlations exist. Similarly, values from wet and dry seasons were compared to quantify temporal variations. Salt content in many soil samples were found to be high enough to significantly decrease rice yields. Continued soil salinization can decrease these yields even more, leading to farmers not producing enough food to sustain their families.

Monitoring Natural Occurring Asbestos in ophiolite sequences and derived soils: implication with human activities

NASA Astrophysics Data System (ADS)

Punturo, Rosalda; Bloise, Andrea; Cirrincione, Rosolino

2016-04-01

The present contribution focuses on soils that developed on serpentinite-metabasite bedrocks, which could potentially be rich in asbestos minerals and, as a consequence, have a negative impact on agricultural activity and on environmental quality. In order to investigate the natural occurrences of asbestos (NOA) on the surface of the soil formed from serpentinites and metabasite, we selected a study area located in Sila Piccola (Calabrian Peloritani Orogen, southern Italy), where previous studies highlighted the presence of asbestiform minerals within the large ophiolitic sequences that crop out (Punturo et al., 2015; Bloise et al., 2015). Agricultural soil samples have been collected mainly close to urban centres and characterized by using different analytical techniques such as X-ray powder diffraction (XRPD), transmission electron microscopy combined with energy dispersive spectrometry (TEM-EDS), thermogravimetry (TG) and differential scanning calorimetry (DSC) Results pointed out as all the collected soil samples contain serpentine minerals (e.g., chrysotile), asbestos amphiboles, clays, chlorite, muscovite, plagioclase and iron oxides in various amounts. Electron microscope images of the soils show that their contain a variety of aggregating agents such as organic matter and clay in which individual fibres of chrysotile and tremolite-actinolite are trapped. The investigation showed that both serpentinite and metabasite rocks act as a perennial source of contamination for the agriculture lands because of the high amount of tremolite-actinolite found in the studied soil samples developed on such lithotypes. Even if asbestiform minerals usually occur in aggregates which cannot be suspended in the air, agricultural activities such as plowing can destroy these soil aggregates with the creation of dust containing inhalable asbestos fibres that evolve into airborne increasing the exposure of population to them. Since the dispersion of fibres could be associated with carcinogenic lung cancer, in our opinion further research is required to investigate the variation in the asbestos content in soils with increase in distance from serpentinites outcrops, in order to assess the non-occupational lifelong exposure of population to Natural Occurring Asbestos. References Punturo R., Bloise A., Critelli T., Catalano M., Fazio E., and Apollaro C. (2015). Environmental implications related to natural asbestos occurrences in the ophiolites of the Gimigliano-Mount Reventino unit (Calabria, southern Italy). Intern. J. of Environmental Research, 9(2), 405-418. Bloise A., Punturo R., Catalano M., Miriello D., and Cirrincione R. (2016). Naturally occurring asbestos (NOA) in rock and soil and relation with human activities: the monitoring example of selected sites in Calabria (southern Italy) Ital. J. Geosci., 135, 2, (doi: 10.3301/IJG.2015.24).

Occurrences of uranium at Clinton, Hunterdon County, New Jersey

USGS Publications Warehouse

McKeown, F.A.; Klemic, H.; Choquette, P.W.

1954-01-01

An occurrence of uranium at Clinton, Hunterdon County, N. J. was first brought to the attention of the U.S. Geological Survey when Mr. Thomas L. Eak of Avenel, N. J. submitted to the Survey a sample containing 0.068 percent uranium. Subsequent examinations of the area around Clinton indicated that detailed mapping and study were warranted. The uranium occurrences at Clinton are in or associated with fault zones in the Kittatinny limestone of Cambro-Ordovician age. The limestone generally light gray, thick bedded, and dolomitic; chert is common but not abundant. Regionally and locally, faults are the most significant structural features. The local faults at Clinton are the loci for most of the uranium. The largest fault can be traced for about 700 feet and is radioactive everywhere it crops out. Samples from this fault contain as much as 0.038 percent uranium; the average content is about 0.010 percent uranium. Uranium also occurs disseminated in two 4-inch layers of black feldspathic dolomite and in several zones of residual soil derived from the Kittatinny limestone. The black layers contain as much as 0.046 percent uranium and can be traced only about 20 feet along strike. They are cut by a small fault that is also radioactive. The radioactive soil zones are roughly elongated parallel to bedding. Soil from them contains up to 0.008 percent uranium. The uranium occurrences are best explained by a supergene origin. The sampling, mapping, and radioactivity testing of uranium occurrences at Clinton indicate they are too low grade to be of current economic interest.

Trench ‘Bathtubbing’ and Surface Plutonium Contamination at a Legacy Radioactive Waste Site

PubMed Central

2013-01-01

Radioactive waste containing a few grams of plutonium (Pu) was disposed between 1960 and 1968 in trenches at the Little Forest Burial Ground (LFBG), near Sydney, Australia. A water sampling point installed in a former trench has enabled the radionuclide content of trench water and the response of the water level to rainfall to be studied. The trench water contains readily measurable Pu activity (∼12 Bq/L of 239+240Pu in 0.45 μm-filtered water), and there is an associated contamination of Pu in surface soils. The highest 239+240Pu soil activity was 829 Bq/kg in a shallow sample (0–1 cm depth) near the trench sampling point. Away from the trenches, the elevated concentrations of Pu in surface soils extend for tens of meters down-slope. The broader contamination may be partly attributable to dispersion events in the first decade after disposal, after which a layer of soil was added above the trenched area. Since this time, further Pu contamination has occurred near the trench-sampler within this added layer. The water level in the trench-sampler responds quickly to rainfall and intermittently reaches the surface, hence the Pu dispersion is attributed to saturation and overflow of the trenches during extreme rainfall events, referred to as the ‘bathtub’ effect. PMID:24256473

Apollo 17 "Orange soil" and meteorite impact on liquid lava

USGS Publications Warehouse

Roedder, E.; Weiblen, P.W.

1973-01-01

THE 'orange soil' from Shorty Crater differs greatly from ordinary lunar soils in that it consists of ???99% 10-300 ??m smooth shiny spherules and broken fragments of spherules of transparent orange glass, about 20% of which contain partly crystallized to opaque material. The remaining 1 % is chiefly crystalline basalt fragments. Although the colour of the individual orange spherule varies with thickness from yellow-orange to red-brown, all orange glass in our sample (74220, 70; 0.25 g) has a uniform index of refraction (??? 1.712). By contrast, other lunar soils contain spherules ranging from 1.50 to 1.75. The orange glass is also completely free of bubbles, to the limit of resolution of the light microscope, whereas bubbles are present in many other spherule samples. The spherules generally appear spherical in a normal microscope mount, but when viewed from two directions many are found to be oblate spheroids with axial ratios varying from near 1.00 to as low as 0.42 (Fig. 1a). Some have fissioned during free flight1 and all stages of the fission process are found, as described for the Apollo 11 samples. Only a few spherules seem to have been distorted by landing while still soft. One notable exception is the occurrence of small spherules of orange glass conforming and adhering to the surface of larger black spherules (Fig. 1b). ?? 1973 Nature Publishing Group.

Transport of Cryptosporidium parvum Oocysts in Soil Columns following Applications of Raw and Separated Liquid Slurries

PubMed Central

Petersen, Heidi H.; Enemark, Heidi L.; Olsen, Annette; Amin, M. G. Mostofa

2012-01-01

The potential for the transport of viable Cryptosporidium parvum oocysts through soil to land drains and groundwater was studied using simulated rainfall and intact soil columns which were applied raw slurry or separated liquid slurry. Following irrigation and weekly samplings over a 4-week period, C. parvum oocysts were detected from all soil columns regardless of slurry type and application method, although recovery rates were low (<1%). Soil columns with injected liquid slurry leached 73 and 90% more oocysts compared to columns with injected and surface-applied raw slurries, respectively. Among leachate samples containing oocysts, 44/72 samples yielded viable oocysts as determined by a dye permeability assay (DAPI [4′,6′-diamidino-2-phenylindole]/propidium iodide) with the majority (41%) of viable oocysts found in leachate from soil columns with added liquid slurry. The number of viable oocysts was positively correlated (r = 0.63) with the total number of oocysts found. Destructively sampling of the soil columns showed that type of slurry and irrigation played a role in the vertical distribution of oocysts, with more oocysts recovered from soil columns added liquid slurry irrespective of the irrigation status. Further studies are needed to determine the effectiveness of different slurry separation technologies to remove oocysts and other pathogens, as well as whether the application of separated liquid slurry to agricultural land may represent higher risks for groundwater contamination compared to application of raw slurry. PMID:22706058

Atmospheric dust deposition on soils around an abandoned fluorite mine (Hammam Zriba, NE Tunisia).

PubMed

Djebbi, Chaima; Chaabani, Fredj; Font, Oriol; Queralt, Ignasi; Querol, Xavier

2017-10-01

The present study focuses on the eolian dispersion and dust deposition, of major and trace elements in soils in a semi-arid climate, around an old fluorite (CaF 2 ) and barite (BaSO 4 ) mine, located in Hammam Zriba in Northern Tunisia. Ore deposits from this site contain a high amount of metal sulphides constituting heavy metal pollution in the surrounding environment. Samples of waste from the surface of mine tailings and agricultural topsoil samples in the vicinity of the mine were collected. The soil samples and a control sample from unpolluted area, were taken in the direction of prevailing northwest and west winds. Chemical analysis of these solids was performed using both X-ray fluorescence and X-ray diffraction. To determine the transfer from mine wastes to the soils, soluble fraction was performed by inductively coupled plasma and ionic chromatography. The fine grained size fraction of the un-restored tailings, still contained significant levels of barium, strontium, sulphur, fluorine, zinc and lead with mean percentages (wt%) of 30 (calculated as BaO), 13 (as SrO), 10 (as SO 3 ), 4 (F), 2 (Zn) and 1.2 (Pb). Also, high concentrations of cadmium (Cd), arsenic (As) and mercury (Hg) were found with an averages of 36, 24 and 1.2mgkg -1 , respectively. As a result of the eolian erosion of the tailings and their subsequent wind transport, the concentrations of Ba, Sr, S, F, Zn and Pb were extremely high in the soils near to the tailings dumps, with 5%, 4%, 7%, 1%, 0.8% and 0.2%, respectively. Concentration of major pollutants decreases with distance, but they were high even in the farthest samples. Same spatial distribution was observed for Cd, As and Hg. While, the other elements follow different spatial patterns. The leaching test revealed that most elements in the mining wastes, except for the anions, had a low solubility despite their high bulk concentrations. According the 2003/33/CE Decision Threshold, some of these tailings samples were considered as hazardous. Furthermore, other waste samples, considered non hazardous, were not inert. In contrast, the SO 4 2- , Ba, Pb and Sb leachable contents measured in most of the soil samples were relatively high, exceeding the inert threshold for landfill disposal of wastes. Copyright © 2017 Elsevier Inc. All rights reserved.

VegeSafe: A community science program measuring soil-metal contamination, evaluating risk and providing advice for safe gardening.

PubMed

Rouillon, Marek; Harvey, Paul J; Kristensen, Louise J; George, Steven G; Taylor, Mark P

2017-03-01

The extent of metal contamination in Sydney residential garden soils was evaluated using data collected during a three-year Macquarie University community science program called VegeSafe. Despite knowledge of industrial and urban contamination amongst scientists, the general public remains under-informed about the potential risks of exposure from legacy contaminants in their home garden environment. The community was offered free soil metal screening, allowing access to soil samples for research purposes. Participants followed specific soil sampling instructions and posted samples to the University for analysis with a field portable X-ray Fluorescence (pXRF) spectrometer. Over the three-year study period, >5200 soil samples, primarily from vegetable gardens, were collected from >1200 Australian homes. As anticipated, the primary soil metal of concern was lead; mean concentrations were 413 mg/kg (front yard), 707 mg/kg (drip line), 226 mg/kg (back yard) and 301 mg/kg (vegetable garden). The Australian soil lead guideline of 300 mg/kg for residential gardens was exceeded at 40% of Sydney homes, while concentrations >1000 mg/kg were identified at 15% of homes. The incidence of highest soil lead contamination was greatest in the inner city area with concentrations declining towards background values of 20-30 mg/kg at 30-40 km distance from the city. Community engagement with VegeSafe participants has resulted in useful outcomes: dissemination of knowledge related to contamination legacies and health risks; owners building raised beds containing uncontaminated soil and in numerous cases, owners replacing all of their contaminated soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Geophagy practices and the content of chemical elements in the soil eaten by pregnant women in artisanal and small scale gold mining communities in Tanzania.

PubMed

Nyanza, Elias C; Joseph, Mary; Premji, Shahirose S; Thomas, Deborah Sk; Mannion, Cynthia

2014-04-15

Geophagy, a form of pica, is the deliberate consumption of soil and is relatively common across Sub-Saharan Africa. In Tanzania, pregnant women commonly eat soil sticks sold in the market (pemba), soil from walls of houses, termite mounds, and ground soil (kichuguu). The present study examined geophagy practices of pregnant women in a gold mining area of Geita District in northwestern Tanzania, and also examined the potential for exposure to chemical elements by testing soil samples. We conducted a cross sectional study using a convenience sample of 340 pregnant women, ranging in age from 15-49 years, who attended six government antenatal clinics in the Geita District, Tanzania. Structured interviews were conducted in June-August, 2012, to understand geophagy practices. In addition, soil samples taken from sources identified by pregnant women practicing geophagy were analysed for mineral element content. Geophagy was reported by 155 (45.6%) pregnant women with 85 (54.8%) initiating the practice in the first trimester. A total of 101 (65%) pregnant women reported eating soil 2 to 3 times per day while 20 (13%) ate soil more than 3 times per day. Of 155 pregnant women 107 (69%) bought pemba from local shops, while 48 (31%) consumed ground soil kichuguu. The estimated mean quantity of soil consumed from pemba was 62.5 grams/day. Arsenic, chromium, copper, iron, manganese, nickel and zinc levels were found in both pemba and kichuguu samples. Cadmium and mercury were found only in the kichuguu samples. Based on daily intake estimates, arsenic, copper and manganese for kichuguu and copper and manganese for pemba samples exceed the oral Minimum Risk Levels designated by the U.S. Agency for Toxic Substance and Disease Registry. Almost 50% of participants practiced geophagy in Geita District consistent with other reports from Africa. Both pemba and kichuguu contained chemical elements at varying concentration, mostly above MRLs. As such, pregnant women who eat soil in Geita District are exposed to potentially high levels of chemical elements, depending upon frequency of consumption, daily amount consumed and the source location of soil eaten.

FMR thermomagnetic studies up to 900 C of lunar soils and potential magnetic analogues. [Ferromagnetic Resonance studies

NASA Technical Reports Server (NTRS)

Morris, R. V.; Gibbons, R. V.; Hoerz, F.

1975-01-01

Using a recently developed furnace, ferromagnetic resonance (FMR) thermomagnetic studies up to 900 C were employed to measure the Curie points of the superparamagnetic (SP) and single domain (SD) particles in lunar soils and potential magnetic analogue materials. Based on measured Curie points of 775 C, the SP and SD particles in lunar soils 10084-853, 12070-29, 14161-46, and 67010-4 are essentially pure metallic Fe. Synthetic and terrestrial samples containing magnetite, titanomaghemites, and magnetite-like particles have measured Curie points below 600 C are thus not magnetic analogues of lunar soils.

Rapid immobilization of simulated radioactive soil waste by microwave sintering.

PubMed

Zhang, Shuai; Shu, Xiaoyan; Chen, Shunzhang; Yang, Huimin; Hou, Chenxi; Mao, Xueli; Chi, Fangting; Song, Mianxin; Lu, Xirui

2017-09-05

A rapid and efficient method is particularly necessary in the timely disposal of seriously radioactive contaminated soil. In this paper, a series of simulated radioactive soil waste containing different contents of neodymium oxide (3-25wt.%) has been successfully vitrified by microwave sintering at 1300°C for 30min. The microstructures, morphology, element distribution, density and chemical durability of as obtained vitrified forms have been analyzed. The results show that the amorphous structure, homogeneous element distribution, and regular density improvement are well kept, except slight cracks emerge on the magnified surface for the 25wt.% Nd 2 O 3 -containing sample. Moreover, all the vitrified forms exhibit excellent chemical durability, and the leaching rates of Nd are kept as ∼10 -4 -10 -6 g/(m 2 day) within 42days. This demonstrates a potential application of microwave sintering in radioactive contaminated soil disposal. Copyright © 2017 Elsevier B.V. All rights reserved.

[Study on composite stabilization of arsenic (As) contaminated soil].

PubMed

Wang, Hao; Pan, Li-xiang; Zhang, Xiang-yu; Li, Meng; Song, Bao-hua

2013-09-01

Since the contaminated soil may contain various kinds of heavy metals, use of single chemical reagent leads to poor remediation and high cost. In this study, soil containing As, Zn, Cd was sampled, and different reagents were selected to carry out the rapid stabilization of contaminated soil. The TCLP (toxicity characteristic leaching procedure) was used to evaluate the leachate toxicity of heavy metals and the results indicated that calcium-containing, sulphur-containing and iron-containing reagents had good performance in reducing the metal mobility. The stabilization efficiency of the six reagents tested ranked in the order of CaO > Na2S > organic sulfur > Chitosan > FeSO4 > (C2H5)2NCS2Na. Two types of reagents (six reagents) were combined based on the target properties of different reagents and the stabilization efficiency was evaluated and analyzed. The results indicated that the composite reagents had higher stabilization efficiency: the efficiency of 3% FeSO4 + 5% CaO was 81.7%, 97.2% and 68.2% for As, Cd and Zn, respectively, and the efficiency of 3% CaO + 5% organic sulfur was 76.6%, 95.7% and 93.8% for these three metals, respectively. Speciation analysis was carried out in this study and the results suggested that it was the change of metals from the exchangeable state to the reduction (for inorganic reagent) or oxidation state (for organic reagent) that caused the soil stabilization and the degree of change determined the stabilization efficiency.

Application of laboratory reflectance spectroscopy to target and map expansive soils: example of the western Loiret, France

NASA Astrophysics Data System (ADS)

Hohmann, Audrey; Dufréchou, Grégory; Grandjean, Gilles; Bourguignon, Anne

2014-05-01

Swelling soils contain clay minerals that change volume with water content and cause extensive and expensive damage on infrastructures. Based on spatial distribution of infrastructure damages and existing geological maps, the Bureau de Recherches Géologiques et Minières (BRGM, i.e. the French Geological Survey) published in 2010 a 1:50 000 swelling hazard map of France, indexing the territory to low, moderate, or high swelling risk. This study aims to use SWIR (1100-2500 nm) reflectance spectra of soils acquired under laboratory controlled conditions to estimate the swelling potential of soils and improve the swelling risk map of France. 332 samples were collected at the W of Orléans (France) in various geological formations and swelling risk areas. Comparisons of swelling potential of soil samples and swelling risk areas of the map show several inconsistent associations that confirm the necessity to redraw the actual swelling risk map of France. New swelling risk maps of the sampling area were produce from soil samples using three interpolation methods. Maps produce using kriging and Natural neighbour interpolation methods did not permit to show discrete lithological units, introduced unsupported swelling risk zones, and did not appear useful to refine swelling risk map of France. Voronoi polygon was also used to produce map where swelling potential estimated from each samples were extrapolated to a polygon and all polygons were thus supported by field information. From methods tested here, Voronoi polygon appears thus the most adapted method to produce expansive soils maps. However, size of polygon is highly dependent of the samples spacing and samples may not be representative of the entire polygon. More samples are thus needed to provide reliable map at the scale of the sampling area. Soils were also sampled along two sections with a sampling interval of ca. 260 m and ca. 50 m. Sample interval of 50 m appears more adapted for mapping of smallest lithological units. The presence of several samples close to themselves indicating the same swelling potential is a good indication of the presence of a zone with constant swelling potential. Combination of Voronoi method and sampling interval of ca. 50 m appear adapted to produce local swelling potential maps in areas where doubt remain or where infrastructure damages attributed to expansive soils are knew.

Abundance and diversity of ammonia-oxidizing archaea and bacteria in the rhizosphere soil of three plants in the Ebinur Lake wetland.

PubMed

He, Yuan; Hu, Wenge; Ma, Decao; Lan, Hongzhu; Yang, Yang; Gao, Yan

2017-07-01

Ammonia oxidation is carried out by ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA). The Ebinur Lake wetland is the best example of a temperate arid zone wetland ecosystem in China. Soil samples were collected from rhizosphere and non-rhizosphere soil containing Halocnemum strobilaceum (samples H and H'), Phragmites australis (samples R and R'), and Karelinia caspia (samples K and K') to study the relationship between environmental factors and the community structure of AOB and AOA. Phylogenetic analysis showed that the AOA sequences belonged to the Nitrosopumilus and Nitrososphaera clusters. AOB were grouped into Nitrosospira sp. and Nitrosomonas sp. Quantitative polymerase chain reaction results showed that the AOA abundance ranged from 2.09 × 10 4 to 2.94 × 10 5 gene copies/g soil. The highest number of AOA was detected in sample K, followed by samples R and H. AOB abundance varied between 2.91 × 10 5 and 1.05 × 10 6 gene copies/g soil, which was higher than that of AOA. Redundancy analysis indicated that electrical conductivity, pH, and NH 4 + -N might influence the community structure of AOA and AOB. AOB might play a more crucial role than AOA in ammonia oxidation based on AOB's higher diversity and abundance in the Ebinur Lake wetland in Xinjiang.

Comparison of Adsorbed Mercury Screening Method With Cold-Vapor Atomic Absorption Spectrophotometry for Determination of Mercury in Soil

NASA Technical Reports Server (NTRS)

Easterling, Donald F.; Hovanitz, Edward S.; Street, Kenneth W.

2000-01-01

A field screening method for the determination of elemental mercury in environmental soil samples involves the thermal desorption of the mercury from the sample onto gold and then the thermal desorption from the gold to a gold-film mercury vapor analyzer. This field screening method contains a large number of conditions that could be optimized for the various types of soils encountered. In this study, the conditions were optimized for the determination of mercury in silty clay materials, and the results were comparable to the cold-vapor atomic absorption spectrophotometric method of determination. This paper discusses the benefits and disadvantages of employing the field screening method and provides the sequence of conditions that must be optimized to employ this method of determination on other soil types.

Persistence of chlorpyrifos in a mineral and an organic soil.

PubMed

Chapman, R A; Harris, C R

1980-01-01

Chlorpyrifos (Lorsban emulsifiable concentrate) was applied at 3.4 kg AI/ha and incorporated into sand and muck soil contained in small field plots. Soil samples were taken at intervals over 2 yr. Radishes and carrots, seeded yearly, served as indicator crops for absorption of insecticide residues. Samples were extracted and analyzed, by gas-liquid chromatography, for chlorpyrifos, oxychlorpyrifos, and 3,5,6-trichloro-2-pyridinol. Chlorpyrifos residues declined rapidly, with 50% of the initial application remaining after 2 and 8 wk in sand and muck, respectively, and 4 and 9% after 1 yr. Pyridinol residues increased to 13 and 39% of the initial chlorpyrifos application in sand and muck after 1 and 8 wk, respectively, and declined thereafter. Oxychlorpyrifos was detected in the 2 soils at very low levels only in immediate posttreatment samples. In the first year of the study low levels (less than 0.1 ppm) of chlorpyrifos and the pyridinol were detected in radishes and carrots.

Inventory and vertical migration of ¹³⁷Cs in Spanish mainland soils.

PubMed

Legarda, F; Romero, L M; Herranz, M; Barrera, M; Idoeta, R; Valiño, F; Olondo, C; Caro, A

2011-06-01

In this study the total activity of (137)Cs deposited per unit area over the Spanish peninsular territory was analysed using a 150 × 150 km(2) mesh grid, with samples taken from 29 points. The deposited activities ranged between 251 and 6074 Bq/m(2). A linear relationship was obtained between these values and the mean annual rainfall at each sampling point which allowed a map to be drawn, using GIS software, which shows the distribution of total deposited (137)Cs activity across the Spanish mainland. At twelve of these sampling points the vertical migration profile of (137)Cs was obtained. These profiles are separated into two groups with different behaviour, one of which includes clay and loam soils and the other containing sandy soils. For both groups of profiles the parameters of the convective-diffusive model, which describes the vertical migration of (137)Cs in the soil, v (apparent convection velocity) and D (apparent diffusion coefficient) were calculated. Copyright © 2011 Elsevier Ltd. All rights reserved.

Soil quality evolution after land use change from paddy soil to vegetable land.

PubMed

Cao, Z H; Huang, J F; Zhang, C S; Li, A F

2004-01-01

A survey was done in 15 typical villages, 150 soil and 86 vegetable plant samples were taken in Jiaxin prefecture of the Taihu Lake region, northern Zhejian province. Results indicate that after 15-20 years land use changed from the paddy rice-wheat (or oilseed rape) double cropping system, to a continuous vegetable land has caused soil quality dramatic change. (1) Acidification: average soil pH was 5.4; about 61% of total samples were pH < 5.5. It was 0.9 units lower than 10 years ago with same upland vegetable cultivation and was 1.2 units lower than soil pH of paddy rice-wheat (or oilseed rape) rotation. (2) Fertilizer salt accumulation: the average salt content was 0.28%, among these about 36.2% of the total samples contained more than 0.3%. (3) Nitrate N and available phosphorus (P) over accumulation: on average it was 279 mg NO3-N/kg, and 45-115 mg P/kg. Nitrate N four times higher and available P 4-10 times more than it is in present paddy rice-wheat rotation soils respectively. This has caused wide concern because of possible groundwater and well drinking water pollution by leached nitrate N and the P losses to water by runoff from vegetable lands induce surface water eutrophication.

Part C: Geochemistry of Soil Samples from 50 Solution-Collapse Features on the Coconino Plateau, Northern Arizona

USGS Publications Warehouse

Van Gosen, Bradley S.; Wenrich, Karen J.

1991-01-01

Soil sampling surveys were conducted during 1984-1986 across 50 solution-collapse features exposed on the Coconino Plateau of northern Arizona in order to determine whether soil geochemistry can be used to distinguish mineralized breccia pipes from unmineralized collapse features. The 50 sampled features represent the variety of collapse features that crop out on plateau surfaces in northwestern Arizonaoodeeplyorooted solution-collapse breccia pipes, near-surface gypsum collapses, and sinkholes. Of the 50 features that were sampled in this study, 3 are confirmed breccia pipes that contain significant uranium and base-metal minerals, I is believed to be a sinkhole with no economic potential, and 4 are stratabound copper deposits whose possible relationship to breccia pipes is yet to be determined. The remaining collapse features are suspected to overlie breccia pipes, although some of these may represent near surface gypsum collapse features. However, no exploratory drilling results or breccia exposures exist to indicate their underlying structure. The low cost and ease of soil sampling suggested that this technique be evaluated for breccia pipe exploration. This report provides the locations and geochemical results for the soil sampling surveys and brief descriptions of the 50 collapse features. The analytical results of almost 2,000 soil samples are provided in tabular hardcopy and dBase III Plus diskcopy format. The analytical data is provided in digital format to allow the reader to choose their own methods for evaluating the effectiveness of soil sampling over known and suspected breccia pipes. A pilot survey conducted over 17 collapse features in 1984 suggested that soil sampling might be useful in distinguishing mineralized breccia pipes from other circular features. Followup detailed surveys in 1985 and 1986 used a radial sampling pattern at each of 50 sites; at least one third of the samples were collected from areas outside of the collapse feature to provide background data. Samples were consistently collected from 3-4 inches depth after the pilot survey showed that metal concentrations were similar in samples from 3-4 inches and 7-8 inches depth. The geochemical analyses of the <80 mesh fractions of the soil samples were performed by the U.S. Geological Survey Analytical Laboratories and Geochemical Services, Inc. The analytical methods applied to these samples by the U.S. Geological Survey laboratories included inductively coupled plasma-atomic emission spectroscopy, X-ray fluorescence spectrometry, neutron activation, atomic absorption, delayed neutron activation, and classical wet chemistry for carbon, fluorine, and sulfur. Geochemical Services, Inc. analyzed the soil samples by inductively coupled plasma emission spectroscopy.

Part B: Geochemistry of Soil Samples from 50 Solution-Collapse Features on the Coconino Plateau, Northern Arizona

USGS Publications Warehouse

Van Gosen, Bradley S.; Wenrich, Karen J.

1991-01-01

Soil sampling surveys were conducted during 1984-1986 across 50 solution-collapse features exposed on the Coconino Plateau of northern Arizona in order to determine whether soil geochemistry can be used to distinguish mineralized breccia pipes from unmineralized collapse features. The 50 sampled features represent the variety of collapse features that crop out on plateau surfaces in northwestern Arizonaoodeeplyorooted solution-collapse breccia pipes, near-surface gypsum collapses, and sinkholes. Of the 50 features that were sampled in this study, 3 are confirmed breccia pipes that contain significant uranium and base-metal minerals, I is believed to be a sinkhole with no economic potential, and 4 are stratabound copper deposits whose possible relationship to breccia pipes is yet to be determined. The remaining collapse features are suspected to overlie breccia pipes, although some of these may represent near surface gypsum collapse features. However, no exploratory drilling results or breccia exposures exist to indicate their underlying structure. The low cost and ease of soil sampling suggested that this technique be evaluated for breccia pipe exploration. This report provides the locations and geochemical results for the soil sampling surveys and brief descriptions of the 50 collapse features. The analytical results of almost 2,000 soil samples are provided in tabular hardcopy and dBase III Plus diskcopy format. The analytical data is provided in digital format to allow the reader to choose their own methods for evaluating the effectiveness of soil sampling over known and suspected breccia pipes. A pilot survey conducted over 17 collapse features in 1984 suggested that soil sampling might be useful in distinguishing mineralized breccia pipes from other circular features. Followup detailed surveys in 1985 and 1986 used a radial sampling pattern at each of 50 sites; at least one third of the samples were collected from areas outside of the collapse feature to provide background data. Samples were consistently collected from 3-4 inches depth after the pilot survey showed that metal concentrations were similar in samples from 3-4 inches and 7-8 inches depth. The geochemical analyses of the <80 mesh fractions of the soil samples were performed by the U.S. Geological Survey Analytical Laboratories and Geochemical Services, Inc. The analytical methods applied to these samples by the U.S. Geological Survey laboratories included inductively coupled plasma-atomic emission spectroscopy, X-ray fluorescence spectrometry, neutron activation, atomic absorption, delayed neutron activation, and classical wet chemistry for carbon, fluorine, and sulfur. Geochemical Services, Inc. analyzed the soil samples by inductively coupled plasma emission spectroscopy.

Geochemistry of Soil Samples from 50 Solution-Collapse Features on the Coconino Plateau, Northern Arizona

USGS Publications Warehouse

Van Gosen, Bradley S.; Wenrich, Karen J.

1991-01-01

Soil sampling surveys were conducted during 1984-1986 across 50 solution-collapse features exposed on the Coconino Plateau of northern Arizona in order to determine whether soil geochemistry can be used to distinguish mineralized breccia pipes from unmineralized collapse features. The 50 sampled features represent the variety of collapse features that crop out on plateau surfaces in northwestern Arizonaoodeeplyorooted solution-collapse breccia pipes, near-surface gypsum collapses, and sinkholes. Of the 50 features that were sampled in this study, 3 are confirmed breccia pipes that contain significant uranium and base-metal minerals, I is believed to be a sinkhole with no economic potential, and 4 are stratabound copper deposits whose possible relationship to breccia pipes is yet to be determined. The remaining collapse features are suspected to overlie breccia pipes, although some of these may represent near surface gypsum collapse features. However, no exploratory drilling results or breccia exposures exist to indicate their underlying structure. The low cost and ease of soil sampling suggested that this technique be evaluated for breccia pipe exploration. This report provides the locations and geochemical results for the soil sampling surveys and brief descriptions of the 50 collapse features. The analytical results of almost 2,000 soil samples are provided in tabular hardcopy and dBase III Plus diskcopy format. The analytical data is provided in digital format to allow the reader to choose their own methods for evaluating the effectiveness of soil sampling over known and suspected breccia pipes. A pilot survey conducted over 17 collapse features in 1984 suggested that soil sampling might be useful in distinguishing mineralized breccia pipes from other circular features. Followup detailed surveys in 1985 and 1986 used a radial sampling pattern at each of 50 sites; at least one third of the samples were collected from areas outside of the collapse feature to provide background data. Samples were consistently collected from 3-4 inches depth after the pilot survey showed that metal concentrations were similar in samples from 3-4 inches and 7-8 inches depth. The geochemical analyses of the <80 mesh fractions of the soil samples were performed by the U.S. Geological Survey Analytical Laboratories and Geochemical Services, Inc. The analytical methods applied to these samples by the U.S. Geological Survey laboratories included inductively coupled plasma-atomic emission spectroscopy, X-ray fluorescence spectrometry, neutron activation, atomic absorption, delayed neutron activation, and classical wet chemistry for carbon, fluorine, and sulfur. Geochemical Services, Inc. analyzed the soil samples by inductively coupled plasma emission spectroscopy.

Part D: Geochemistry of Soil Samples from 50 Solution-Collapse Features on the Coconino Plateau, Northern Arizona

USGS Publications Warehouse

Van Gosen, Bradley S.; Wenrich, Karen J.

1991-01-01

Soil sampling surveys were conducted during 1984-1986 across 50 solution-collapse features exposed on the Coconino Plateau of northern Arizona in order to determine whether soil geochemistry can be used to distinguish mineralized breccia pipes from unmineralized collapse features. The 50 sampled features represent the variety of collapse features that crop out on plateau surfaces in northwestern Arizonaoodeeplyorooted solution-collapse breccia pipes, near-surface gypsum collapses, and sinkholes. Of the 50 features that were sampled in this study, 3 are confirmed breccia pipes that contain significant uranium and base-metal minerals, I is believed to be a sinkhole with no economic potential, and 4 are stratabound copper deposits whose possible relationship to breccia pipes is yet to be determined. The remaining collapse features are suspected to overlie breccia pipes, although some of these may represent near surface gypsum collapse features. However, no exploratory drilling results or breccia exposures exist to indicate their underlying structure. The low cost and ease of soil sampling suggested that this technique be evaluated for breccia pipe exploration. This report provides the locations and geochemical results for the soil sampling surveys and brief descriptions of the 50 collapse features. The analytical results of almost 2,000 soil samples are provided in tabular hardcopy and dBase III Plus diskcopy format. The analytical data is provided in digital format to allow the reader to choose their own methods for evaluating the effectiveness of soil sampling over known and suspected breccia pipes. A pilot survey conducted over 17 collapse features in 1984 suggested that soil sampling might be useful in distinguishing mineralized breccia pipes from other circular features. Followup detailed surveys in 1985 and 1986 used a radial sampling pattern at each of 50 sites; at least one third of the samples were collected from areas outside of the collapse feature to provide background data. Samples were consistently collected from 3-4 inches depth after the pilot survey showed that metal concentrations were similar in samples from 3-4 inches and 7-8 inches depth. The geochemical analyses of the <80 mesh fractions of the soil samples were performed by the U.S. Geological Survey Analytical Laboratories and Geochemical Services, Inc. The analytical methods applied to these samples by the U.S. Geological Survey laboratories included inductively coupled plasma-atomic emission spectroscopy, X-ray fluorescence spectrometry, neutron activation, atomic absorption, delayed neutron activation, and classical wet chemistry for carbon, fluorine, and sulfur. Geochemical Services, Inc. analyzed the soil samples by inductively coupled plasma emission spectroscopy.

Microbial colonization in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota

NASA Astrophysics Data System (ADS)

Marteinsson, V.; Klonowski, A.; Reynisson, E.; Vannier, P.; Sigurdsson, B. D.; Ólafsson, M.

2015-02-01

Colonization of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue-green algae, most studies have been focused on the settlement of plants and animals but less on microbial succession. To explore microbial colonization in diverse soils and the influence of associated vegetation and birds on numbers of environmental bacteria, we collected 45 samples from different soil types on the surface of the island. Total viable bacterial counts were performed with the plate count method at 22, 30 and 37 °C for all soil samples, and the amount of organic matter and nitrogen (N) was measured. Selected samples were also tested for coliforms, faecal coliforms and aerobic and anaerobic bacteria. The subsurface biosphere was investigated by collecting liquid subsurface samples from a 181 m borehole with a special sampler. Diversity analysis of uncultivated biota in samples was performed by 16S rRNA gene sequences analysis and cultivation. Correlation was observed between nutrient deficits and the number of microorganisms in surface soil samples. The lowest number of bacteria (1 × 104-1 × 105 cells g-1) was detected in almost pure pumice but the count was significantly higher (1 × 106-1 × 109 cells g-1) in vegetated soil or pumice with bird droppings. The number of faecal bacteria correlated also to the total number of bacteria and type of soil. Bacteria belonging to Enterobacteriaceae were only detected in vegetated samples and samples containing bird droppings. The human pathogens Salmonella, Campylobacter and Listeria were not in any sample. Both thermophilic bacteria and archaea 16S rDNA sequences were found in the subsurface samples collected at 145 and 172 m depth at 80 and 54 °C, respectively, but no growth was observed in enrichments. The microbiota sequences generally showed low affiliation to any known 16S rRNA gene sequences.

Petroleum contaminated soil in Oman: evaluation of bioremediation treatment and potential for reuse in hot asphalt mix concrete.

PubMed

Jamrah, Ahmad; Al-Futaisi, Ahmed; Hassan, Hossam; Al-Oraimi, Salem

2007-01-01

This paper presents a study that aims at evaluating the leaching characteristics of petroleum contaminated soils as well as their application in hot mix asphalt concrete. Soil samples are environmentally characterized in terms of their total heavy metals and hydrocarbon compounds and leachability. The total petroleum hydrocarbon (TPH) present in the PCS before and after treatment was determined to be 6.8% and 5.3% by dry weight, indicating a reduction of 1% in the TPH of PCS due to the current treatment employed. Results of the total heavy metal analysis on soils indicate that the concentrations of heavy metals are lower when extraction of the soil samples is carried out using hexane in comparison to TCE. The results show that the clean soils present in the vicinity of contaminated sites contain heavy metals in the following decreasing order: nickel (Ni), followed by chromium (Cr), zinc (Zn), copper (Cu), lead (Pb), and vanadium (V). The current treatment practice employed for remediation of the contaminated soil reduces the concentrations of nickel and chromium, but increases the concentrations of all remaining heavy metals.

Geothermal activity supports islands of biodiversity in a hyper-arid, high-elevation landscape, Socompa Volcano, Puna de Atacama, Andes: A cultivation-independent molecular-phylogenetic view of soil microbial communities from an extreme

NASA Astrophysics Data System (ADS)

Costello, E.; Reed, S.; Sowell, P.; Halloy, S.; Schmidt, S.

2006-12-01

Socompa Volcano is a relatively young, unglaciated, 6051 m (19,852`) elevation stratovolcano that lies at the Chilean-Argentine border (24° 25`S, 68° 15`W) at the eastern edge of the Atacama Basin in the Arid Core of the Andes. A 1984 exploration revealed isolated mats of moss, liverwort, algae and lichen- dominated autotrophic communities associated with geothermal vents or warmspots near Socompa`s summit (Halloy, 1991). If extant, this system would present a unique opportunity to study life`s limits in a hyper-arid, high-elevation Mars-like landscape. Returning to Socompa in 2005, we encountered previously described warmspot "2" (Halloy, 1991) at 5824 m (19,107`) and found it partially disturbed by recent foot traffic. We collected warmspot-associated gas and soil samples, as well as other non-vent associated soils on Socompa. These soils were subjected to a battery of analyses, including cultivation-independent surveys of bacterial and eukaryotic small-subunit (SSU) ribosomal RNA (rRNA) gene sequences. Gas samples contained elevated CO2 and CH4 that, along with water vapor, vent directly from rocky "tubes" and percolate diffusely through the ground at the site. In general, Socompa soils were unvegetated, poorly sorted sands and gravels. Non-vent and vent-associated soils had pH 5.23 and 6.8, respectively. Non-vent and warm (25°C), disturbed (mat destroyed) vent-associated soils had no measurable moisture or nitrogen and 0.03% carbon (with SOM δ13C of -26‰). These soils also contained no measurable photosynthetic or photoprotective pigments and low enzyme activities. Conversely, cold (-5°C), undisturbed (but not overlain with dense mat) vent-associated soil had 10% water, 0.02% nitrogen and 0.25% carbon (C:N=13, SOM δ13C of -23.5‰). These soils had higher enzyme activities, contained chlorophyll a, and harbored a diverse array of algae, moss, liverwort, ascomycete, alveolate, and metazoan 18S rRNA sequences (~30 species). On the other hand, in the warm, disturbed vent-associated soil, 1 of only 4 observed eukaryotic species dominated (a cercomonad), and non-vent soil contained only 6 species and was dominated by fungi such as the basidiomycete yeast Cryptococcus. Bacterial diversity was high and significantly different among the three soils. Cyanobacterial sequences were only observed in the cold, undisturbed vent- associated soils. All soils produced colonies on soil extract agar at 0°C, but 10-100X more originated from the cold, undisturbed vent-associated soil. These results suggest that water vapor and possibly CO2, but not necessarily heat, may infiltrate soil across a wider area than previously thought on Socompa, and that these minimal inputs support a complex community whose parent populations may exist hundreds of kilometers away. However, we also note that non-vent associated soils from this cold, arid site are not completely "lifeless". Finally, we caution travelers to this area that physical disturbance can easily destroy these delicate, cryptic communities.

Single-particle characterization of indoor aerosol particles collected at an underground shopping area in Seoul, Korea.

PubMed

Maskey, Shila; Kang, TaeHee; Jung, Hae-Jin; Ro, Chul-Un

2011-02-01

In this study, single-particle characterization of aerosol particles collected at an underground shopping area was performed for the first time. A quantitative single-particle analytical technique, low-Z particle electron probe X-ray microanalysis, was used to characterize a total of 7900 individual particles for eight sets of aerosol samples collected at an underground shopping area in Seoul, Korea. Based on secondary electron images and X-ray spectral data of individual particles, fourteen particle types were identified, in which primary soil-derived particles were the most abundant, followed by carbonaceous, Fe-containing, secondary soil-derived, and secondary sea-salt particles. Carbonaceous particles exist in three types: organic carbon, carbon-rich, and CNO-rich. A significant number of textile particles with chemical composition C, N, and O were encountered in some of the aerosol samples, which were from the textile shops and/or from clothes of passersby. Primary soil-derived particles showed seasonal variation, with peak values in spring samples, reflecting higher air exchange between indoor and outdoor environments in the spring. Secondary soil-derived, secondary sea-salt, and ammonium sulfate particles were frequently encountered in winter samples. Fe-containing particles, contributed from a nearby subway station, were in the range of about 19% relative abundances for all samples. In underground shopping areas, particulate matters can be a considerable health hazard to the workers, shoppers, passersby, and shop-keepers as they spend their considerable time in this closed microenvironment. However, no study on the characteristics of indoor aerosols in an underground shopping area has been reported to our knowledge. This work provides detailed information on characteristics of underground shopping area aerosols on a single particle level. © 2010 John Wiley & Sons A/S.

Leachability of Arsenic (As) Contaminated Landfill Soil Stabilised by Cement and Bagasse Ash

NASA Astrophysics Data System (ADS)

Azhar, A. T. S.; Azim, M. A. M.; Aziman, M.; Nabila, A. T. A.

2016-11-01

Contaminated soil with heavy metals, especially Arsenic (As) has become a major issue worldwide. As is reported to be a metal that affects human health and is related to have caused serious diseases that interrupts the nervous system, blood vessels and kidneys. However, proper treatment techniques such as Stabilization/Solidification (S/S) method can be employed and is capable of controlling these heavy metals from contaminating the soil strata and groundwater resources. This study is to investigate the leachability of Arsenic (As) in S/S method when bagasse ash (BA) is added to remedy contaminated Landfill soil. Cement is added at a proportion of 5%, 10%, 15% and 20% in sample weights without BA while in another sample; the cement replaces BA at a proportion of 2.5%, 5%, 7.5%. and 10%. All samples were allowed to harden and cured at room temperature for 7, 14 and 28 days. The effectiveness of the treatment was assessed by conducting Synthetic Precipitation Leaching Procedure (SPLP). Results indicate that pH and leachability are found to have major influence on metal release. The final pH after leaching tests showed improvements especially samples containing BA. In addition, the concentration of As in the SPLP test after the curing period of 28 days were detected to be below the leachability limit as regulated by WHO's Guidelines for Drinking-water Quality. As a whole, the results obtained from testing showed that sample containing 10% cement with 10% BA is the most effective and is the optimum mix since this proportion succeeded in minimising the leachability of As at total reduction by 100%, In conclusion, partial replacement of cement with BA in the binder system has been successful in reducing the leachability.

Effects of Nitrogen Fertilization and Thinning Treatments on Subsurface Soil Carbon and Nitrogen

NASA Astrophysics Data System (ADS)

Gross, C. D.; James, J. N.; Harrison, R. B.

2016-12-01

Increases in intensively managed forest plantations have caused concern for the long-term productivity and sustainability of these stands, as decreased organic matter retention and shorter rotations can substantially impact soil nutrition both in the short- and long-term. This study aims to provide data for regional responses of soil carbon (C) and nitrogen (N) by depth to fertilization and thinning treatments. Soil was sampled at an intensively managed Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) plantation in northwestern Oregon, USA. Nine 0.2-ha plots were sampled with at least three pits per plot. Management regimes included no treatment (control), fertilization (F+), minimal thinning (mT), repeated thinning (rT), and combination treatments (mTF+ and rTF+). Fertilized plots received a total of 1120 kg N ha-1 as urea over 16 years. Bulk density and chemical analysis samples were taken in the middle of succeeding soil layers at depths of 0.1, 0.2, 0.5, 1.0, and 1.5 m. Forest floor samples were collected from a randomly placed quadrat. Preliminary results show an increase in total soil C and N of 113 and 106%, respectively, on the mTF+ plot compared to a control plot. The subsoil, defined here as below 0.2 m, contained over 50% of both soil C and N on the mTF+ plot and experienced greater C and N increases than the surface soil following treatment. This study demonstrates that forest management practices over a relatively short time span (<30 years) can significantly alter subsoil, which comprises a substantial portion of biologically available C and N in terrestrial ecosystems. Subsoil processes are critical to our understanding of changes in soil quality and our ability to accurately assess changes in soil C and N reservoirs.

Minute tubular forms in soil

NASA Technical Reports Server (NTRS)

Casida, L. E., Jr.; Liu, K.-C.

1979-01-01

Large numbers of long, straight, flattened structures were observed during an electron-microscope study of bacteriophage in aqueous extracts. These structures were called tubules and ranged in width from 10 to 50 nm. Materials and methods were discussed relative to extraction of tubules from soil, electron microscopy, quantitation of tubules in filtrate suspension, tests performed on tubules, plaque formation, and nutrient amendments. It is found that all of the tubules recovered from soil are broken at one or both ends. They are present in surface soils but not in a subsurface sample. Their numbers decrease during bacterial multiplication in soil or broth-containing soil. The tubules appear to be composed of protein that could be disintegrated to liberate nonprotein fibers. A possible clue to the nature of the tubules is their apparent relation to soil bacteria.

Microbial colonisation in diverse surface soil types in Surtsey and diversity analysis of its subsurface microbiota

NASA Astrophysics Data System (ADS)

Marteinsson, V.; Klonowski, A.; Reynisson, E.; Vannier, P.; Sigurdsson, B. D.; Ólafsson, M.

2014-09-01

Colonisation of life on Surtsey has been observed systematically since the formation of the island 50 years ago. Although the first colonisers were prokaryotes, such as bacteria and blue-green algae, most studies have been focusing on settlement of plants and animals but less on microbial succession. To explore microbial colonization in diverse soils and the influence of associate vegetation and birds on numbers of environmental bacteria, we collected 45 samples from different soils types on the surface of the island. Total viable bacterial counts were performed with plate count at 22, 30 and 37 °C for all soils samples and the amount of organic matter and nitrogen (N) was measured. Selected samples were also tested for coliforms, faecal coliforms aerobic and anaerobic bacteria. The deep subsurface biosphere was investigated by collecting liquid subsurface samples from a 182 m borehole with a special sampler. Diversity analysis of uncultivated biota in samples was performed by 16S rRNA gene sequences analysis and cultivation. Correlation was observed between N deficits and the number of microorganisms in surface soils samples. The lowest number of bacteria (1 × 104-1 × 105 g-1) was detected in almost pure pumice but the count was significant higher (1 × 106-1 × 109 g-1) in vegetated soil or pumice with bird droppings. The number of faecal bacteria correlated also to the total number of bacteria and type of soil. Bacteria belonging to Enterobacteriaceae were only detected in vegetated and samples containing bird droppings. The human pathogens Salmonella, Campylobacter and Listeria were not in any sample. Both thermophilic bacteria and archaea 16S rDNA sequences were found in the subsurface samples collected at 145 m and 172 m depth at 80 °C and 54 °C, respectively, but no growth was observed in enrichments. The microbiota sequences generally showed low affiliation to any known 16S rRNA gene sequences.

A simple and automated sample preparation system for subsequent halogens determination: Combustion followed by pyrohydrolysis.

PubMed

Pereira, L S F; Pedrotti, M F; Vecchia, P Dalla; Pereira, J S F; Flores, E M M

2018-06-20

A simple and automated system based on combustion followed by a pyrohydrolysis reaction was proposed for further halogens determination. This system was applied for digestion of soils containing high (90%) and also low (10%) organic matter content for further halogens determination. The following parameters were evaluated: sample mass, use of microcrystalline cellulose and heating time. For analytes absorption, a diluted alkaline solution (6 mL of 25 mmol L -1  NH 4 OH) was used in all experiments. Up to 400 mg of soil with high organic matter content and 100 mg of soil with low organic matter content (mixed with 400 mg of cellulose) could be completely digested using the proposed system. Quantitative results for all halogens were obtained using less than 12 min of sample preparation step (about 1.8 min for sample combustion and 10 min for pyrohydrolysis). The accuracy was evaluated using a certified reference material of coal and spiked samples. No statistical difference was observed between the certified values and results obtained by the proposed method. Additionally, the recoveries obtained using spiked samples were in the range of 98-103% with relative standard deviation values lower than 5%. The limits of quantification obtained for F, Cl, Br and I for soil with high (400 mg of soil) and low (100 mg of soil) organic matter were in the range of 0.01-2 μg g -1 and 0.07-59 μg g -1 , respectively. The proposed system was considered as a simple and suitable alternative for soils digestion for further halogens determination by ion chromatography and inductively coupled plasma mass spectrometry techniques. Copyright © 2018 Elsevier B.V. All rights reserved.

Spectral mapping of soil organic matter

NASA Technical Reports Server (NTRS)

Kristof, S. J.; Baumgardner, M. F.; Johannsen, C. J.

1974-01-01

Multispectral remote sensing data were examined for use in the mapping of soil organic matter content. Computer-implemented pattern recognition techniques were used to analyze data collected in May 1969 and May 1970 by an airborne multispectral scanner over a 40-km flightline. Two fields within the flightline were selected for intensive study. Approximately 400 surface soil samples from these fields were obtained for organic matter analysis. The analytical data were used as training sets for computer-implemented analysis of the spectral data. It was found that within the geographical limitations included in this study, multispectral data and automatic data processing techniques could be used very effectively to delineate and map surface soils areas containing different levels of soil organic matter.

Tritium environmental transport studies at TFTR

NASA Astrophysics Data System (ADS)

Ritter, P. D.; Dolan, T. J.; Longhurst, G. R.

1993-06-01

Environmental tritium concentrations will be measured near the Tokamak Fusion Test Reactor (TFTR) to help validate dynamic models of tritium transport in the environment. For model validation the database must contain sequential measurements of tritium concentrations in key environmental compartments. Since complete containment of tritium is an operational goal, the supplementary monitoring program should be able to glean useful data from an unscheduled acute release. Portable air samplers will be used to take samples automatically every 4 hours for a week after an acute release, thus obtaining the time resolution needed for code validation. Samples of soil, vegetation, and foodstuffs will be gathered daily at the same locations as the active air monitors. The database may help validate the plant/soil/air part of tritium transport models and enhance environmental tritium transport understanding for the International Thermonuclear Experimental Reactor (ITER).

Geochemical soil sampling for deeply-buried mineralized breccia pipes, northwestern Arizona

USGS Publications Warehouse

Wenrich, K.J.; Aumente-Modreski, R. M.

1994-01-01

Thousands of solution-collapse breccia pipes crop out in the canyons and on the plateaus of northwestern Arizona; some host high-grade uranium deposits. The mineralized pipes are enriched in Ag, As, Ba, Co, Cu, Mo, Ni, Pb, Sb, Se, V and Zn. These breccia pipes formed as sedimentary strata collapsed into solution caverns within the underlying Mississippian Redwall Limestone. A typical pipe is approximately 100 m (300 ft) in diameter and extends upward from the Redwall Limestone as much as 1000 m (3000 ft). Unmineralized gypsum and limestone collapses rooted in the Lower Permian Kaibab Limestone or Toroweap Formation also occur throughout this area. Hence, development of geochemical tools that can distinguish these unmineralized collapse structures, as well as unmineralized breccia pipes, from mineralized breccia pipes could significantly reduce drilling costs for these orebodies commonly buried 300-360 m (1000-1200 ft) below the plateau surface. Design and interpretation of soil sampling surveys over breccia pipes are plagued with several complications. (1) The plateau-capping Kaibab Limestone and Moenkopi Formation are made up of diverse lithologies. Thus, because different breccia pipes are capped by different lithologies, each pipe needs to be treated as a separate geochemical survey with its own background samples. (2) Ascertaining true background is difficult because of uncertainties in locations of poorly-exposed collapse cones and ring fracture zones that surround the pipes. Soil geochemical surveys were completed on 50 collapse structures, three of which are known mineralized breccia pipes. Each collapse structure was treated as an independent geochemical survey. Geochemical data from each collapse feature were plotted on single-element geochemical maps and processed by multivariate factor analysis. To contrast the results between geochemical surveys (collapse structures), a means of quantifying the anomalousness of elements at each site was developed. This degree of anomalousness, named the "correlation value", was used to rank collapse features by their potential to overlie a deeply-buried mineralized breccia pipe. Soil geochemical results from the three mineralized breccia pipes (the only three of the 50 that had previously been drilled) show that: (1) Soils above the SBF pipe contain significant enrichment of Ag, Al, As, Ba, Ga, K, La, Mo, Nd, Ni, Pb, Sc, Th, U and Zn, and depletion in Ca, Mg and Sr, in contrast to soils outside the topographic and structural rim; (2) Soils over the inner treeless zone of the Canyon pipe show Mo and Pb enrichment anf As and Ga depletion, in contrast to soils from the surrounding forest; and (3) The soil survey of the Mohawk Canyon pipe was a failure because of the rocky terrane and lack of a B soil horizon, or because the pipe plunges. At least 11 of the 47 other collapse structures studied contain anomalous soil enrichments similar to the SBF uranium ore-bearing pipe, and thus have good potential as exploration targets for uranium. One of these 11, #1102, does contain surface mineralized rock. These surveys suggest that soil geochemical sampling is a useful tool for the recognition of many collapse structures with underlying ore-bearing breccia pipes. ?? 1994.

Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons

PubMed Central

Penton, C. Ryan; Gupta, Vadakattu V. S. R.; Yu, Julian; Tiedje, James M.

2016-01-01

We examined the effect of different soil sample sizes obtained from an agricultural field, under a single cropping system uniform in soil properties and aboveground crop responses, on bacterial and fungal community structure and microbial diversity indices. DNA extracted from soil sample sizes of 0.25, 1, 5, and 10 g using MoBIO kits and from 10 and 100 g sizes using a bead-beating method (SARDI) were used as templates for high-throughput sequencing of 16S and 28S rRNA gene amplicons for bacteria and fungi, respectively, on the Illumina MiSeq and Roche 454 platforms. Sample size significantly affected overall bacterial and fungal community structure, replicate dispersion and the number of operational taxonomic units (OTUs) retrieved. Richness, evenness and diversity were also significantly affected. The largest diversity estimates were always associated with the 10 g MoBIO extractions with a corresponding reduction in replicate dispersion. For the fungal data, smaller MoBIO extractions identified more unclassified Eukaryota incertae sedis and unclassified glomeromycota while the SARDI method retrieved more abundant OTUs containing unclassified Pleosporales and the fungal genera Alternaria and Cercophora. Overall, these findings indicate that a 10 g soil DNA extraction is most suitable for both soil bacterial and fungal communities for retrieving optimal diversity while still capturing rarer taxa in concert with decreasing replicate variation. PMID:27313569

The influence of water-soluble As(III) and As(V) on dehydrogenase activity in soils affected by mine tailings.

PubMed

Fernández, Pilar; Sommer, Irene; Cram, Silke; Rosas, Irma; Gutiérrez, Margarita

2005-09-15

Dehydrogenase activity (DHA) in soils contaminated by arsenic-bearing tailings was correlated with total arsenic and total water-soluble arsenic (As(III)+As(V)) to evaluate the impact of tailings dispersion on the oxidative capacity of soil microorganisms. Georeferenced surface soil samples (0-10 cm depth) were collected at different distances from a tailings dam. In the samples farthest from the dam, all water-soluble arsenic (avg. 0.6+/-0.1 mg kg(-1)) was As(V). The highest concentration of water-soluble As(III)+As(V) (>1.9 mg kg(-1)) was found where As(III) was present. DHA averaged 438.9+/-79.3 microg INTF g(-1) h(-1) at the greatest distance from the dam and decreased to 92.3+/-27.1 microg INTF g(-1) h(-1) with decreasing distance from the dam. Pearson correlation coefficient between DHA and samples containing water-soluble As(V) (r=-0.87) was greater than that between DHA and total water-soluble arsenic (r=-0.57). The correlation between DHA and soluble arsenic containing both As(V) and As(III) was not significant (r=0.24). In soils with detectable As(III) concentrations where wet conditions prevail (i.e., reducing conditions), there is an abiotic response in addition to a biotic one. The correlation between DHA and total water-soluble As(III)+ As(V) was higher (r=-0.79) when the abiotic response was excluded. Our study demonstrated the importance of distinguishing between total and available fraction and its species and the need to evaluate biological functions in addition to purely geochemical analyses. DHA bioassay combined with other microbial properties offers a good tool for evaluating soil microbial activity and status and is a suitable indicator of the oxidative capacity of soil microorganisms affected by tailings in an oxidizing environment; however, under reducing conditions, abiotic responses must also be studied.

Lithologic distribution and geologic history of the Apollo 17 site: The record in soils and small rock particles from the highland massifs

NASA Astrophysics Data System (ADS)

Jolliff, Bradley L.; Rockow, Kaylynn M.; Korotev, Randy L.; Haskin, Larry A.

1996-01-01

Through analysis by instrumental neutron activation (INAA) of 789 individual lithic fragments from the 2 mm-4 mm grain-size fractions of five Apollo 17 soil samples (72443, 72503, 73243, 76283, and 76503) and petrographic examination of a subset, we have determined the diversity and proportions of rock types recorded within soils from the highland massifs. The distribution of rock types at the site, as recorded by lithic fragments in the soils, is an alternative to the distribution inferred from the limited number of large rock samples. The compositions and proportions of 2 mm-4 mm fragments provide a bridge between compositions of <1 mm fines, and types and proportions of rocks observed in large collected breccias and their clasts. The 2 mm-4 mm fraction of soil from South Massif, represented by an unbiased set of lithic fragments from station-2 samples 72443 and 72503, consists of 71% noritic impact-melt breccia, 7% incompatible-trace-element-(ITE)-poor highland rock types (mainly granulitic breccias), 19% agglutinates and regolith breccias, 1% high-Ti mare basalt, and 2% others (very-low-Ti (VLT) basalt, monzogabbro breccia, and metal). In contrast, the 2 mm-4 mm fraction of a soil from the North Massif, represented by an unbiased set of lithic fragments from station-6 sample 76503, has a greater proportion of ITE-poor highland rock types and mare-basalt fragments: it consists of 29% ITE-poor highland rock types (mainly granulitic breccias and troctolitic anorthosite), 25% impact-melt breccia, 13% high-Ti mare basalt, 31% agglutinates and regolith breccias, 1% orange glass and related breccia, and 1% others. Based on a comparison of mass-weighted mean compositions of the lithic fragments with compositions of soil fines from all Apollo 17 highland stations, differences between the station-2 and station-6 samples are representative of differences between available samples from the two massifs. From the distribution of different rock types and their compositions, we conclude the following: (1) North-Massif and South-Massif soil samples differ significantly in types and proportions of ITE-poor highland components and ITE-rich impact-melt-breccia components. These differences reflect crudely layered massifs and known local geology. The greater percentage of impact-melt breccia in the South-Massif light-mantle soil stems from derivation of the light mantle from the top of the massif, which apparently is richer in noritic impact-melt breccia than are lower parts of the massifs. (2) At station 2, the 2 mm-4 mm grain-size fraction is enriched in impact-melt breccias compared to the <1 mm fraction, suggesting that the <1 mm fraction within the light mantle has a greater proportion of lithologies such as granulitic breccias which are more prevalent lower in the massifs and which we infer to be older (pre-basin) highland components. (3) Soil from station 6, North Massif, contains magnesian troctolitic anorthosite, which is a component that is rare in station-2 South-Massif soils. (4) Compositional differences between poikilitic impact-melt breccias from the two massifs suggest broad-scale heterogeneity in impact-melt breccia interpreted by most investigators to be ejecta from the Serenitatis basin. We have found rock types not previously recognized or uncommon at the Apollo 17 site. These include (1) ITE-rich impact-melt breccias that are compositionally distinct from previously recognized "aphanitic" and "poikilitic" groups at Apollo 17; (2) regolith breccias that are free of mare components and poor in impact melt of the types associated with the main melt-breccia groups, and that, if those groups derive from the Serenitatis impact, may represent the pre-Serenitatis surface; (3) several VLT basalts, including an unusual very-high-K basaltic breccia; (4) orange-glass regolith breccias; (5) aphanitic-matrix melt breccias at station 6; (6) fragments of alkali-rich composition, including alkali anorthosite, and monzogabbro; (7) one fragment of 72275-type KREEP basalt from station 3; (8) seven lithic fragments of ferroan-anorthositic-suite rocks; and (9) a fragment of metal, possibly from an L chondrite. Some of these lithologies have been found only as lithic fragments in the soils and not among the large rock samples. In contrast, we have not found among the 2 mm-4 mm lithic fragments individual samples of certain lithologies that have been recognized as clasts in breccias (e.g., dunite and spinel troctolite). The diversity of lithologic information contained in the lithic fragments of these soils nearly equals that found among large rock samples, and most information bearing on petrographic relationships is maintained, even in such small samples. Given a small number of large samples for "petrologic ground truth," small lithic fragments contained in soil "scoop" samples can provide the basis for interpreting the diversity of rock types and their proportions in remotely sensed geologic units. They should be considered essential targets for future automated sample-analysis and sample-return missions.

The characterization, mobility, and persistence of roaster-derived arsenic in soils at Giant Mine, NWT

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bromstad, Mackenzie J.; Wrye, Lori A.; Jamieson, Heather E.

Approximately 20,000 tonnes of arsenic (As)-bearing emissions from roasting gold (Au)-bearing arsenopyrite ore were aerially released from 1949 to 1999 at Giant Mine, near Yellowknife, Canada. Soil samples collected within 4 km of the former roaster from sites undisturbed by mining or other human activity contain up to 7700 mg/kg total As. Total As concentrations are highest within a few cm of the surface, and particularly enriched in soil pockets on rock outcrops. Scanning electron microscopy and synchrotron microanalysis show that roaster-derived arsenic trioxide (As2O3) has persisted in shallow soils in the area. Roaster-generated maghemite and hematite are also present.more » These anthropogenic forms of As are much more common in near-surface soils than natural As-bearing minerals. Comparison of the proportions of As, Sb, and Au concentrations in outcrop soil samples and historic As2O3-rich dust captured by emission controls suggest most of the roaster-derived As in soils at Giant was likely deposited before 1964. Topographic restriction by rock outcrops and a dry, cold climate likely contribute to the persistence of As2O3 in outcrop soils.« less

Entisol land characteristics with and without cover crop (Mucuna bracteata) on rubber plantation

NASA Astrophysics Data System (ADS)

Sakiah; Sembiring, M.; Hasibuan, J.

2018-02-01

Optimal nutrient delivery is one way to improve the quality and quantity of crop production. This is because the crops needs for nutrient is quite high, while the soil capacity in providing nutrients is limited. In addition to fertilization, nutrients can be given in the form of added organic material or planted as cover crop. The research took place from April to August 2016 in Bandar Pinang, Bandar Sumatera Indonesia Ltd. (SIPEF Group) plantation, with survey method. Soil samples were taken based on: Topography (flat and slope 15-30%), cover crop (with or without Mucuna bracteata) and plant age (seedling periods 1, 2 and 3). The soil sample is taken composite by zig zag method. The observed parameters were organic matter, N total, soil texture, bulk density and infiltration rate. Mucuna bracteata planting increased the contain of soil organic matter by 30.43% in flat area and 53.33% in hilly area, amount of N total soil by 27.27% in flat area and 7.69% at hilly area, bulk density 3.73 % In flat area and 0.41% in hilly area, soil infiltration by 48.88% with sandy clay dominant soil texture.

A Comparative Analyses of Granulometry, Mineral Composition and Major and Trace Element Concentrations in Soils Commonly Ingested by Humans

PubMed Central

Ngole-Jeme, Veronica M.; Ekosse, Georges-Ivo E.

2015-01-01

This study compared the granulometric properties, mineralogical composition and concentrations of major and trace element oxides of commonly ingested soils (geophagic soil) collected from different countries with a view of understanding how varied they may be in these properties and to understand the possible health implications of ingesting them. Soil samples were collected from three different countries (South Africa, Swaziland and Democratic Republic of Congo (DRC)) and their granulometric properties, concentrations of major and trace element oxides as well as mineralogical composition determined. Differences were observed in the granulometric properties of geophagic soil from the three different countries with most of them having <20% clay content. The soils also showed varied degrees of weathering with values of Chemical Index of Alteration (CIA) and Chemical Index of Weathering (CIW) being between 60% and 99.9% respectively. The mineral assemblages of the soils from South Africa and Swaziland were dominated by the primary minerals quartz and feldspar whereas soils from DRC had more of kaolinite, a secondary mineral than primary minerals. Soils from DRC were associated with silt, clay, Al2O3, and CIA unlike most samples from South Africa which were associated with SiO2, sand, K2O, CaO, and MgO. The soils from Swaziland were closely associated with silt, H2O and Fe2O3(t). These associations reflect the mineralogy of the samples. These soils are not likely to serve as nutrient supplements because of the low concentrations of the nutrient elements contained. The coarse texture of the samples may also result in dental destruction during mastication. Sieving of the soils before ingestion to remove coarse particles is recommended to reduce the potential health threat associated with the ingestion of coarse-textured soils. PMID:26264010

CO2 efflux from soil under influence of cadmium and glucose

NASA Astrophysics Data System (ADS)

Gilmullina, Aliia; Galitskaya, Polina; Selivanovskaya, Svetlana

2017-04-01

Soil is the largest pool of organic carbon. Any anthropogenic activity may change the soil organic carbon stock resulting in the atmospheric carbon concentration increase. Organic wastes and sewage sludge are often used for soil fertilization. These amendments often contain not only organic compounds stimulating soil microflora but also toxic compounds e.g. metals inhibiting them. The question about the influence of such amendments on soil carbon stock still remains open. The aim of this study was to evaluate individual glucose and cadmium (Cd) additions and their combined effects on carbon mineralization and microbial community structure in forest soil sampled from different depths (0-20 cm, 20-40 cm and 40-60 cm). We incubated soil samples for 14 days after the addition of: glucose (10000 mg kg-1), Cd (300 mg kg-1) and their mixture. CO2 efflux was measured by CO2 trapping in NaOH, at the 3rd, 7th and 14th days of incubation DNA was extracted from soil samples for assessment of microbial community structure via real-time PCR and Illumina sequencing. Glucose addition induced the increase of soil respiration and fungal-bacterial ratio. However, bacterial alpha-biodiversity decreased as glucose addition caused the dominance of Proteobacteria (0-20 cm, 20-40 cm and 40-60 cm), Actinobacteria (20-40 cm) and Acidobacteria (40-60 cm) phyla. Single Cd addition did not have any effect on parameters studied. In case of simultaneous addition of glucose and Cd, soil respiration and microbial community structure mainly depended more on glucose amendment as compared with metal.

Dissolved organic C and N pools in soils amended with composted and thermally-dried sludge as affected by soil tillage systems and sampling depth

NASA Astrophysics Data System (ADS)

García-Gil, Juan Carlos; Soler-Rovira, Pedro Angel; García López de Sa, Esther; Polo, Alfredo

2013-04-01

Soil tillage practices exert a significant influence on the dynamic of soluble organic C and N pools, affecting nutrient cycling in agricultural systems by enhancing its mineralization through microbial activities or stabilization in soil microaggregates, which contribute to mitigate greenhouse gases emissions. The objective of the present research was to determine the influence of three different soil management systems (moldboard plowing, chisel and no-tillage) and the application of composted sludge (CS) and thermally-dried sewage sludge (TSS) obtained from wastewater treatment processes on dissolved organic C (water-soluble organic C -WSOC-, carbohydrates, phenolic compounds) and soluble N (total-N, NH4+, NO3-) pools in a long-term field experiment (27 years) conducted on a sandy-loam soil at the experimental station "La Higueruela" (40° 03'N, 4° 24'W) under semi-arid conditions. Both organic amendments were applied at a rate of 30 tonnes per hectare prior to tillage practices. Unamended soils were used as control for each tillage system. Soil sampling was performed two months after tillage practices at the following depths for each treatment: 0-10 cm, 10-20 cm and 20-30 cm. Results obtained for unamended soils showed that no-tillage management increased total-N, NH4+ and NO3- contents at the 0-10 cm depth samples, meanwhile WSC and carbohydrates contents were larger at 20-30 cm depth samples in both moldboard and no-tillage plots. CS and TSS-amended soils presented a general increase in soluble C and N compounds, being significantly higher in TSS-amended soils, as TSS contains a great amount of labile organic C and N substrates due to the lack of stabilization treatment. TSS-amended soils under no-tillage and chisel plowing showed larger N, NH4+ and NO3- content at the 0-10 cm samples, meanwhile moldboard management exhibited larger NH4+ and NO3- content at 10-20 and 20-30 cm samples, possibly due to the incorporation of TSS at deeper depths (20-40 cm). CS and TSS-amended soils in no-tillage system showed the largest content of organic C pools at 0-10 cm depth samples due to less soil disturbance and the input of organic substrates with CS and TSS on soil surface. CS and TSS-amended soils under chisel plowing exhibited similar contents of soluble organic C pools at 10-20 and 20-30 cm depth samples and only TSS-amended soils increased significantly WSOC content at 0-10 cm samples. Similarly, contents of WSOC and carbohydrates in moldboard plowing were distributed more uniformly throughout the soil profile due to the turnover of soil and CS and TSS amendments into the plow layer. Acknowledgements: this research was supported by the Spanish CICYT, Project no. CTM2011-25557.

Polyoxyethylene Tallow Amine, a Glyphosate Formulation Adjuvant: Soil Adsorption Characteristics, Degradation Profile, and Occurrence on Selected Soils from Agricultural Fields in Iowa, Illinois, Indiana, Kansas, Mississippi, and Missouri.

PubMed

Tush, Daniel; Meyer, Michael T

2016-06-07

Polyoxyethylene tallow amine (POEA) is an inert ingredient added to formulations of glyphosate, the most widely applied agricultural herbicide. POEA has been shown to have toxic effects to some aquatic organisms making the potential transport of POEA from the application site into the environment an important concern. This study characterized the adsorption of POEA to soils and assessed its occurrence and homologue distribution in agricultural soils from six states. Adsorption experiments of POEA to selected soils showed that POEA adsorbed much stronger than glyphosate; calcium chloride increased the binding of POEA; and the binding of POEA was stronger in low pH conditions. POEA was detected on a soil sample from an agricultural field near Lawrence, Kansas, but with a loss of homologues that contain alkenes. POEA was also detected on soil samples collected between February and early March from corn and soybean fields from ten different sites in five other states (Iowa, Illinois, Indiana, Missouri, Mississippi). This is the first study to characterize the adsorption of POEA to soil, the potential widespread occurrence of POEA on agricultural soils, and the persistence of the POEA homologues on agricultural soils into the following growing season.

Polyoxyethylene tallow amine, a glyphosate formulation adjuvant: Soil adsorption characteristics, degradation profile, and occurrence on selected soils from agricultural fields in Iowa, Illinois, Indiana, Kansas, Mississippi, and Missouri

USGS Publications Warehouse

Tush, Daniel L.; Meyer, Michael T.

2016-01-01

Polyoxyethylene tallow amine (POEA) is an inert ingredient added to formulations of glyphosate, the most widely applied agricultural herbicide. POEA has been shown to have toxic effects to some aquatic organisms making the potential transport of POEA from the application site into the environment an important concern. This study characterized the adsorption of POEA to soils and assessed its occurrence and homologue distribution in agricultural soils from six states. Adsorption experiments of POEA to selected soils showed that POEA adsorbed much stronger than glyphosate; calcium chloride increased the binding of POEA; and the binding of POEA was stronger in low pH conditions. POEA was detected on a soil sample from an agricultural field near Lawrence, Kansas, but with a loss of homologues that contain alkenes. POEA was also detected on soil samples collected between February and early March from corn and soybean fields from ten different sites in five other states (Iowa, Illinois, Indiana, Missouri, Mississippi). This is the first study to characterize the adsorption of POEA to soil, the potential widespread occurrence of POEA on agricultural soils, and the persistence of the POEA homologues on agricultural soils into the following growing season.

Distribution of selenium in soils of agricultural fields, western San Joaquin Valley, California

USGS Publications Warehouse

Fujii, Roger; Deverel, S.J.; Hatfield, D.B.

1988-01-01

Soils from three agricultural fields in the Panoche Creek alluvial fan area in the western San Joaquin Valley, California, were analyzed for soluble, adsorbed, and total concentrations of selenium (Se) to assess the distribution and forms of Se in relation to the leaching of Se from soils. This assessment is needed to evaluate the importance of soil Se in affecting ground water concentrations. Soil samples were collected from three fields with drainage systems of different ages (6, 15, 1.5 yr) and different Se concentrations in drain water (58, 430, 3700 µg L−1, respectively). Concentrations of soluble Se and salinity were highest in soils from the field drained for 1.5 yr and lowest in the field drained for 6 yr. Of the total concentration of soil Se from all three fields, the proportion of adsorbed and soluble Se ranged from 1 to 11% and 2 > 0.68) in saturation extracts of soils sampled from below the water table. In contrast, most soluble salts and Se apparently have been leached from the unsaturated soils in the fields drained for 6 and 15 yr. For the leached soils, dissolution and precipitation of evaporite minerals containing Se may no longer control concentrations of soluble Se.

How do peat type, sand addition and soil moisture influence the soil organic matter mineralization in anthropogenically disturbed organic soils?

NASA Astrophysics Data System (ADS)

Säurich, Annelie; Tiemeyer, Bärbel; Don, Axel; Burkart, Stefan

2017-04-01

Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. As a consequence of both drainage induced mineralization and anthropogenic sand mixing, large areas of former peatlands under agricultural use contain soil organic carbon (SOC) at the boundary between mineral and organic soils. Studies on SOC dynamics of such "low carbon organic soils" are rare as the focus of previous studies was mainly either on mineral soils or "true" peat soil. However, the variability of CO2 emissions increases with disturbance and therefore, we have yet to understand the reasons behind the relatively high CO2 emissions of these soils. Peat properties, soil organic matter (SOM) quality and water content are obviously influencing the rate of CO2 emissions, but a systematic evaluation of the hydrological and biogeochemical drivers for mineralization of disturbed peatlands is missing. With this incubation experiment, we aim at assessing the drivers of the high variability of CO2 emissions from strongly anthropogenically disturbed organic soil by systematically comparing strongly degraded peat with and without addition of sand under different moisture conditions and for different peat types. The selection of samples was based on results of a previous incubation study, using disturbed samples from the German Agricultural Soil Inventory. We sampled undisturbed soil columns from topsoil and subsoil (three replicates of each) of ten peatland sites all used as grassland. Peat types comprise six fens (sedge, Phragmites and wood peat) and four bogs (Sphagnum peat). All sites have an intact peat horizon that is permanently below groundwater level and a strongly disturbed topsoil horizon. Three of the fen and two of the bog sites have a topsoil horizon altered by sand-mixing. In addition the soil profile was mapped and samples for the determination of soil hydraulic properties were collected. All 64 soil columns (including four additional reference samples) will be installed in a microcosm system under a constant temperature of 10°C. The water-saturated soil columns will be drained via suction plates at the bottom of the columns by stepwise increase of the suction. The head space of the soil columns will be permanently flushed with moistened synthetic air and CO2 concentrations will be measured via online gas chromatography. First results will be presented.

Performance of vertical up-flow constructed wetlands on swine wastewater containing tetracyclines and tet genes.

PubMed

Huang, Xu; Liu, Chaoxiang; Li, Ke; Su, Jianqiang; Zhu, Gefu; Liu, Lin

2015-03-01

Antibiotics and antibiotic resistance genes (ARGs) pollution in animal feeding farms received more public attention recently. Livestock wastewater contains large quantities of antibiotics and ARGs even after traditional lagoon treatment. In this study, the performance of vertical up-flow constructed wetlands (VUF-CWs) on swine wastewater containing tetracycline compounds (TCs) and tet genes was evaluated based on three aspects, TCs and tet genes removal efficiencies, residual TCs and tet genes in soils and plants, and the effect of TCs accumulation on nutrients removal and tet genes development. High removal efficiencies (69.0-99.9%) were achieved for oxytetracycline (OTC), tetracycline (TC) and chlortetracycline (CTC) with or without OTC spiked in the influent additionally. TCs concentrations in surface soils increased at first two sampling periods and then decreased after plants were harvested. Satisfactory nutrients removal efficiencies were also obtained, but TN and NH4-N removal efficiencies were significantly negative correlated with total concentration of TCs (∑TCs) in the soils (p < 0.01). The absolute abundances of all the target genes (tetO, tetM, tetW, tetA, tetX and intI1) were greatly reduced with their log units ranging from 0.26 to 3.3. However, the relative abundances of tetO, tetM and tetX in some effluent samples were significantly higher than those in the influent (p < 0.05). The relative abundances of tet genes except for tetO were significantly correlated with ∑TCs in the soils (p < 0.05). In summary, the proposed VUF-CWs are effective alternative for the removal of TCs and tet genes. But it is of great importance to prevent large accumulation of TCs in the soils. Copyright © 2014 Elsevier Ltd. All rights reserved.

Kinetics of hydrogen release from lunar soil

NASA Technical Reports Server (NTRS)

Bustin, Roberta

1990-01-01

With increasing interest in a lunar base, there is a need for extensive examination of possible lunar resources. Hydrogen will be needed on a lunar base for many activities including providing fuel, making water, and serving as a reducing agent in the extraction of oxygen from its ores. Previous studies have shown the solar wind has implanted hydrogen in the lunar regolith and that hydrogen is present not only in the outer layer of soil but to considerable depths, depending on the sampling site. If this hydrogen is to be mined and used on the lunar surface, a number of questions need to be answered. How much energy must be expended in order to release the hydrogen from the soil. What temperatures must be attained, and how long must the soil be heated. This study was undertaken to provide answers to practical questions such as these. Hydrogen was determined using a Pyrolysis/GC technique in which hydrogen was released by heating the soil sample contained in a quartz tube in a resistance wire furnace, followed by separation and quantitative determination using a gas chromatograph with a helium ionization detector. Heating times and temperatures were varied, and particle separates were studied in addition to bulk soils. The typical sample size was 10 mg of lunar soil. All of the soils used were mature soils with similar hydrogen abundances. Pre-treatments with air and steam were used in an effort to find a more efficient way of releasing hydrogen.

Sorbent amendment as a remediation strategy to reduce PFAS mobility and leaching in a contaminated sandy soil from a Norwegian firefighting training facility.

PubMed

Hale, Sarah E; Arp, Hans Peter H; Slinde, Gøril Aasen; Wade, Emma Jane; Bjørseth, Kamilla; Breedveld, Gijs D; Straith, Bengt Fredrik; Moe, Kamilla Grotthing; Jartun, Morten; Høisæter, Åse

2017-03-01

Aqueous film-forming foams (AFFF) containing poly- and perfluoroalkyl substances (PFAS) used for firefighting have led to the contamination of soil and water at training sites. The unique physicochemical properties of PFAS results in environmental persistency, threatening water quality and making remediation of such sites a necessity. This work investigated the role of sorbent amendment to PFAS contaminated soils in order to immobilise PFAS and reduce mobility and leaching to groundwater. Soil was sampled from a firefighting training facility at a Norwegian airport and total and leachable PFAS concentrations were quantified. Perfluorooctanesulfonic acid (PFOS) was the most dominant PFAS present in all soil samples (between 9 and 2600 μg/kg). Leaching was quantified using a one-step batch test with water (L/S 10). PFOS concentrations measured in leachate water ranged between 1.2 μg/L and 212 μg/L. Sorbent amendment (3%) was tested by adding activated carbon (AC), compost soil and montmorillonite to selected soils. The extent of immobilisation was quantified by measuring PFAS concentrations in leachate before and after amendment. Leaching was reduced between 94 and 99.9% for AC, between 29 and 34% for compost soil and between 28 and 40% for the montmorillonite amended samples. Sorbent + soil/water partitioning coefficients (K D ) were estimated following amendment and were around 8 L/kg for compost soil and montmorillonite amended soil and ranged from 1960 to 16,940 L/kg for AC amended soil. The remediation of AFFF impacted soil via immobilisation of PFAS following sorbent amendment with AC is promising as part of an overall remediation strategy. Copyright © 2016 Elsevier Ltd. All rights reserved.

Role of indigenous arsenate and iron(III) respiring microorganisms in controlling the mobilization of arsenic in a contaminated soil sample.

PubMed

Vaxevanidou, K; Christou, C; Kremmydas, G F; Georgakopoulos, D G; Papassiopi, N

2015-03-01

In this study two different treatment options were investigated for the release of arsenic from a contaminated soil sample. The first option was based on the "bioaugmentation" principle and involved addition of a pure Fe(III)-reducing culture, i.e. Desulfuromonas palmitatis. The second option consisted in the "biostimulation" of indigenous bacteria and involved simple addition of nutrients. Due to the strong association of As with soil ferric oxides, the reductive dissolution of soil oxides by D. palmitatis lead to 45 % arsenic release in solution (2.15 mM). When only nutrients were supplied to the soil, the same amounts of Fe and As were dissolved with slower rates and most aqueous As was found to be in the trivalent state, indicating the presence of arsenate reducing species. The arsenate reducing microorganisms were enriched with successive cultures, using Na2HAsO4 as electron acceptor. The phylogenetic analysis revealed that the enriched microbial consortium contained Desulfosporosinus species, which are known arsenate reducers.

The Apollo 14 regolith - Chemistry of cores 14210/14211 and 14220 and soils 14141, 14148, and 14149

NASA Technical Reports Server (NTRS)

Laul, J. C.; Papike, J. J.; Simon, S. B.

1982-01-01

Neutron activation analysis was performed on bulk and size fractions from drive tube specimens from 39 cm and 16.5 cm depths, and soil samples taken at the Apollo 14 landing site. Chemical data were obtained for 31 major, minor, and trace elements in the KREEPy soils. The cores were homogeneous in chemical composition, containing 20% LKFM, 15% mare basalt, 6% ANT, and 59% high-K KREEP, according to the classifications of Laul and Papike (1980). The meteoritic fraction was 3-7% for both cores, while the chemical compositions of both cores and soils were similar. Differences were detected in the fractions finer than 10 microns, which were more feldspathic than the coarser samples. The similarities between the grains 1000-90 micron in diam and less than 10 micron in diam, in terms of chemical contents, indicates that the observed agglutinates were derived from fusion of the finest grained fraction. The dominant soil-forming processes were comminution and vertical mixing of the regolith.

Gamma-spectrometric measurement of radioactivity in agricultural soils of the Lombardia region, northern Italy.

PubMed

Guidotti, Laura; Carini, Franca; Rossi, Riccardo; Gatti, Marina; Cenci, Roberto M; Beone, Gian Maria

2015-04-01

This work is part of a wider monitoring project of the agricultural soils in Lombardia, which aims to build a database of topsoil properties and the potentially toxic elements, organic pollutants and gamma emitting radionuclides that the topsoils contain. A total of 156 agricultural soils were sampled according to the LUCAS (Land Use/Cover Area frame statistical Survey) standard procedure. The aim was to provide a baseline to document the conditions present at the time of sampling. The results of the project concerning soil radioactivity are presented here. The aim was to assess the content of (238)U, (232)Th, (137)Cs and (40)K by measuring soil samples by gamma spectrometry. (238)U, (232)Th and (40)K activities range 24-231, 20-70, and 242-1434 Bq kg(-1) respectively. The geographic distribution of (238)U reflects the geophysical framework of the Lombardia region: the soils with high content of uranium are distributed for the most part in the South Alpine belt, where the presence of magmatic rocks is widespread. These soils show an higher activity of (238)U than of (232)Th. The (238)U activities become lower than (232)Th when soils are located in the plain, originating from basic sedimentary rocks. (137)Cs activity ranges 0.4-86.8 kBq m(-2). The lowest activity of (137)Cs is in the plain, whereas the highest is in the North on soils kept as lawn or pasture. The (137)Cs activity of some samples suggests the presence of accumulation processes that lead to (137)Cs enriched soils. This is the first survey of gamma emitting radionuclides in Lombardia that is based on the LUCAS standard sampling. The results from this monitoring campaign are important for the human radiation exposure and provide the zero point, which will be useful for assessing future effects due to external factors such as human activities. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Genus-Specific Primers for Study of Fusarium Communities in Field Samples

PubMed Central

Edel-Hermann, Véronique; Gautheron, Nadine; Durling, Mikael Brandström; Kolseth, Anna-Karin; Steinberg, Christian; Persson, Paula; Friberg, Hanna

2015-01-01

Fusarium is a large and diverse genus of fungi of great agricultural and economic importance, containing many plant pathogens and mycotoxin producers. To date, high-throughput sequencing of Fusarium communities has been limited by the lack of genus-specific primers targeting regions with high discriminatory power at the species level. In the present study, we evaluated two Fusarium-specific primer pairs targeting translation elongation factor 1 (TEF1). We also present the new primer pair Fa+7/Ra+6. Mock Fusarium communities reflecting phylogenetic diversity were used to evaluate the accuracy of the primers in reflecting the relative abundance of the species. TEF1 amplicons were subjected to 454 high-throughput sequencing to characterize Fusarium communities. Field samples from soil and wheat kernels were included to test the method on more-complex material. For kernel samples, a single PCR was sufficient, while for soil samples, nested PCR was necessary. The newly developed primer pairs Fa+7/Ra+6 and Fa/Ra accurately reflected Fusarium species composition in mock DNA communities. In field samples, 47 Fusarium operational taxonomic units were identified, with the highest Fusarium diversity in soil. The Fusarium community in soil was dominated by members of the Fusarium incarnatum-Fusarium equiseti species complex, contradicting findings in previous studies. The method was successfully applied to analyze Fusarium communities in soil and plant material and can facilitate further studies of Fusarium ecology. PMID:26519387

Magnetic studies on Apollo 15 and 16 lunar samples

NASA Technical Reports Server (NTRS)

Pearce, G. W.; Gose, W. A.; Strangway, D. W.

1973-01-01

The magnetic properties of lunar samples are almost exclusively due to rather pure metallic iron. The mare basalt contains about 0.06 wt.% Fe, the soils 0.5-0.6 wt.%, and the breccias 0.3-1.0 wt.%. Most of the additional iron in the soils and breccias is believed to be the result of reduction processes operating on the lunar surface. Whereas the total metallic iron content of the soils from all landing sites is rather constant, the Fe(0)/Fe(++) ratio and the average iron grain size increase with the age of the landing site, reflecting increasing maturity. The crystalline rocks studied from Apollo 16 have highly variable, but generally, very high metallic Fe content (up to 1.7 wt.% Fe). It is suggested that these rocks are either breccias or igneous samples which have been severely thermally metamorphosed in a highly reducing environment.

Identifying root exudates in field contaminated soil systems

NASA Astrophysics Data System (ADS)

Rosenfeld, C.; Martinez, C. E.

2012-12-01

Carbon (C) compounds exuded from plant roots comprise a significant and reactive fraction of belowground C pools. These exudates substantially alter the soil directly surrounding plant roots and play a vital role in the global C cycle, soil ecology, and ecosystem mobility of both nutrients and contaminants. In soils, the solubility and bioavailability of metals such as iron, zinc, and cadmium are intricately linked to the quantity and chemical characteristics of the C compounds allocated to the soil by plants. Cadmium (Cd), a toxic heavy metal, forms stronger bonds with reduced S- and N-containing compounds than with carboxylic acids, which may influence exudate composition in hyperaccumulator and tolerant plants grown in Cd contaminated soils. We hypothesize that hyperaccumulator plants will exude a larger quantity of aromatic N and chelating di- and tri-carboxylic acid molecules, while plants that exclude heavy metals from uptake will exude a larger proportion of reduced S containing molecules. This study examines how a variety of techniques can measure the low concentrations of complex organic mixtures exuded by hyperaccumulator and non-hyperaccumulator plants grown in Cd-contaminated soils. Two congeneric plants, Thlaspi caerulescens (Ganges ecotype), and T. caerulescens (Prayon ecotype) were grown in 0.5 kg pots filled with Cd-contaminated field soils from Chicago, IL. Field soils were contaminated as a result of the application of contaminated biosolids in the 1960's and 1970's. Pots were fitted for rhizon soil moisture samplers, micro-lysimeters developed for in situ collection of small volumes in unsaturated soils, prior to planting. Plants were grown for 8 weeks before exudate collection. After the 8 weeks of growth, a pulse-chase isotope tracer method using the C stable isotope, 13C, was employed to differentiate plant-derived compounds from background soil and microbial-derived compounds. Plants were placed in a CO2 impermeable chamber, and the soil surface was covered by CO2 impermeable sheets to ensure that all 13C in the soil results from photoassimilated C released by roots and not soil-atmosphere gas exchange. Ambient CO2 was drawn down in the system until the CO2 concentration within the tent was less than 50 ppm, after which the labeled 13CO2 was introduced, returning the CO2 concentration to the ambient level (~375 ppm). The CO2 pulse lasted for 60 minutes to allow enough time for 13C assimilation within the plants. In order to determine the ideal sampling time, soil pore water samples were extracted every 1-2 hours following the 13C pulse application, over the course of 24 hours. Samples were analyzed for delta 13C as well as %C, and results indicate that the greatest plant-derived dissolved organic C is present at about 6 hours following the 13C pulse. A second experiment will also be conducted using a combination of NMR and mass spectrometry methods to obtain detailed information regarding chemical structures within exudate samples.

Phase II. Environmental baseline survey of McCormick Ranch, Kirtland Air Force Base, New Mexico. Part 4. Final report, October 1993-January 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hagaraty, G.; Johnson, J.; Middlebrooks, P.

The Phase II EBS results document the extent of environmental contamination believed to be present on McCormick Ranch. Explosive test areas having the greatest potential for containing soil contaminants were identified using several geophysical survey methods: EM 31 terrain conductivity meter, magnetometer/gradiometer, and ground penetrating radar. From the geophysical surveys, five areas selected to conduct further environmental analysis. A total of 310 soil samples were collected from the five areas and 13 specific high explosive test sites. The samples were screened for semi-volatile organic compounds, PETN, TNT, TNT-degradation products, nitrates and radioactivity. Laboratory analyses were performed and no explosives ormore » degradation products were identified. Semi-volatile organic compounds were in 2 samples, manganese was detected in 3 samples, nitrates were discovered below soil action levels, and radiation levels were below background. Consequently, it is unlikely that significant contamination exists.« less

Phase II. Environmental baseline survey of McCormick Ranch, Kirtland Air Force Base, New Mexico. Part 3. Final report, October 1993-January 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hagaraty, G.; Johnson, J.; Middlebrooks, P.

The Phase II EBS results document the extent of environmental contamination believed to be present on McCormick Ranch. Explosive test areas having the greatest potential for containing soil contaminants were identified using several geophysical survey methods: EM 31 terrain conductivity meter, magnetometer/gradiometer, and ground penetrating radar. From the geophysical surveys, five areas were selected to conduct further environmental analysis. A total of 310 soil samples were collected from the five areas and 13 specific high explosive test sites. The samples were screened for semi-volatile organic compounds, PETN, TNT, TNT-degradation products, nitrates and radioactivity. Laboratory analyses were and no explosives ormore » degradation products were identified. Semi-volatile organic compounds were in 2 samples, manganese was detected in 3 samples, nitrates were discovered below soil action levels, and radiation levels were below background. Consequently, it is unlikely that significant contamination exists.« less

Phase II. Environmental baseline survey of McCormick Ranch, Kirtland Air Force Base, New Mexico. Part 1. Final report, October 1993-January 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hagaraty, G.; Johnson, J.; Middlebrooks, P.

The Phase II EBS results document the extent of environmental contamination believed to be present on McCormick Ranch. Explosive test areas having the greatest potential for containing soil contaminants were identified using several geophysical survey methods: EM 31 terrain conductivity meter, magnetometer/gradiometer, and ground penetrating radar. From the geophysical surveys, five areas were selected to conduct further environmental analysis. A total of 310 soil samples were collected from the and 13 specific high explosive test sites. The samples were screened for semi-volatile organic PETN, TNT, TNT-degradation products, nitrates and radioactivity. Laboratory analyses were and no explosives or degradation products weremore » identified. Semi-volatile organic compounds were in 2 samples, manganese was detected in 3 samples, nitrates were discovered below soil action levels, and radiation levels were below background. Consequently, it is unlikely that significant contamination exists.« less

Phase II. Environmental baseline survey of McCormick Ranch, Kirtland Air Force Base, New Mexico. Part 2. Final report, October 1993-January 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hagaraty, G.; Johnson, J.; Middlebrooks, P.

The Phase II EBS results document the extent of environmental contamination believed to be present on McCormick Ranch. Explosive test areas having the greatest potential for containing soil contaminants were identified using several geophysical survey methods: EM 31 terrain conductivity meter, magnetometer/gradiometer, and ground penetrating radar. From the geophysical surveys, five areas were selected to conduct further environmental analysis. A total of 310 soil samples were collected from the five areas and 13 specific high explosive test sites. The samples were screened for semi-volatile organic compounds, PETN, TNT, TNT-degradation products, nitrates and radioactivity. Laboratory analyses were performed and no explosivesmore » or degradation products were identified. Semi-volatile organic compounds were found in 2 samples, manganese was detected in 3 samples, nitrates were discovered below soil action levels, and radiation levels were below background. Consequently, it is unlikely that significant contamination exists.« less

Phase II. Environmental baseline survey of McCormick Ranch, Kirtland Air Force Base, New Mexico. Part 5. Final report, October 1993-January 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hagaraty, G.; Johnson, J.; Middlebrooks, P.

The Phase II EBS results document the extent of environmental contamination believed to be present on McCormick Ranch. Explosive test areas having the greatest potential for containing soil contaminants were identified using several geophysical survey methods: EM 31 terrain conductivity meter, magnetometer/gradiometer, and ground penetrating radar. From the geophysical surveys, five areas were selected to conduct further environmental analysis. A total of 310 soil samples were collected from the areas and 13 specific high explosive test sites. The samples were screened for semi-volatile organic compounds, PETN, TNT, TNT-degradation products, nitrates and radioactivity. Laboratory analyses were performed and no explosives ormore » degradation products were identified. Semi-volatile organic compounds were in 2 samples, manganese was detected in 3 samples, nitrates were discovered below soil action levels and radiation levels were below background. Consequently, it is unlikely that significant contamination exists.« less

Fumigant Management Plan - Phase 1 Templates

EPA Pesticide Factsheets

FMPs are required by pesticide labels, so EPA provides chemical-specific soil fumigant templates and samples in PDF and Word formats. Choose the appropriate template for products containing chloropicrin, dazomet, metam sodium/potassium, or methyl bromide.

Microbial degradation of total petroleum hydrocarbons in crude oil: a field-scale study at the low-land rainforest of Ecuador.

PubMed

Maddela, Naga Raju; Scalvenzi, Laura; Venkateswarlu, Kadiyala

2017-10-01

A field-level feasibility study was conducted to determine total petroleum hydrocarbon (TPH)-degrading potential of two bacterial strains, Bacillus thuringiensis B3 and B. cereus B6, and two fungi, Geomyces pannorum HR and Geomyces sp. strain HV, all soil isolates obtained from an oil field located in north-east region of Ecuador. Crude oil-treated soil samples contained in wooden boxes received a mixture of all the four microorganisms and were incubated for 90 days in an open low-land area of Amazon rainforest. The percent removal of TPHs in soil samples that received the mixed microbial inoculum was 87.45, indicating the great potential of the soil isolates in field-scale removal of crude oil. The TPHs-degrading efficiency was verified by determining the toxicity of residues, remained in soil after biodegradation, toward viability of Artemia salina or seed germination and plant growth of cowpea. Our results clearly suggest that the selected soil isolates of bacteria and fungi could be effectively used for large-scale bioremediation of sites contaminated with crude oil.

Dynamic leaching behavior of geogenic As in soils after cement-based stabilization/solidification.

PubMed

Li, Jiang-Shan; Wang, Lei; Tsang, Daniel C W; Beiyuan, Jingzi; Poon, Chi Sun

2017-12-01

Cement-based stabilization/solidification (S/S) is a practical treatment approach for hazardous waste with anthropogenic As sources; however, its applicability for geogenic As-containing soil and the long-term leaching potential remain uncertain. In this study, semi-dynamic leaching test was performed to investigate the influence of S/S binders (cement blended with fuel ash (FA), furnace bottom ash (FBA), or ground granulated blast furnace slag (GGBS)) on the long-term leaching characteristics of geogenic As. The results showed that mineral admixtures with higher Ca content and pozzolanic activity were more effective in reducing the leached As concentrations. Thus, cement blended with FBA was inferior to other binders in suppressing the As leaching, while 20% replacement of ordinary Portland cement by GGBS was considered most feasible for the S/S treatment of As-containing soils. The leachability of geogenic As was suppressed by the encapsulation effect of solidified matrix and interlocking network of hydration products that were supported by scanning electron microscopy (SEM), X-ray diffraction (XRD), and X-ray photoelectron spectroscopy (XPS) results. The long-term leaching of geogenic As from the monolithic samples was diffusion-controlled. Increasing the Ca content in the samples led to a decrease in diffusion coefficient and an increase in feasibility for "controlled utilization" of the S/S-treated soils.

Communities of Arbuscular Mycorrhizal Fungi Detected in Forest Soil Are Spatially Heterogeneous but Do Not Vary throughout the Growing Season

PubMed Central

Davison, John; Öpik, Maarja; Zobel, Martin; Vasar, Martti; Metsis, Madis; Moora, Mari

2012-01-01

Despite the important ecosystem role played by arbuscular mycorrhizal fungi (AMF), little is known about spatial and temporal variation in soil AMF communities. We used pyrosequencing to characterise AMF communities in soil samples (n = 44) from a natural forest ecosystem. Fungal taxa were identified by BLAST matching of reads against the MaarjAM database of AMF SSU rRNA gene diversity. Sub-sampling within our dataset and experimental shortening of a set of long reads indicated that our approaches to taxonomic identification and diversity analysis were robust to variations in pyrosequencing read length and numbers of reads per sample. Different forest plots (each 10×10 m and separated from one another by 30 m) contained significantly different soil AMF communities, and the pairwise similarity of communities decreased with distance up to 50 m. However, there were no significant changes in community composition between different time points in the growing season (May-September). Spatial structure in soil AMF communities may be related to the heterogeneous vegetation of the natural forest study system, while the temporal stability of communities suggests that AMF in soil represent a fairly constant local species pool from which mycorrhizae form and disband during the season. PMID:22879900

Open charcoal chamber method for mass measurements of radon exhalation rate from soil surface.

PubMed

Tsapalov, Andrey; Kovler, Konstantin; Miklyaev, Peter

2016-08-01

Radon exhalation rate from the soil surface can serve as an important criterion in the evaluation of radon hazard of the land. Recently published international standard ISO 11665-7 (2012) is based on the accumulation of radon gas in a closed container. At the same time since 1998 in Russia, as a part of engineering and environmental studies for the construction, radon flux measurements are made using an open charcoal chamber for a sampling duration of 3-5 h. This method has a well-defined metrological justification and was tested in both favorable and unfavorable conditions. The article describes the characteristics of the method, as well as the means of sampling and measurement of the activity of radon absorbed. The results of the metrological study suggest that regardless of the sampling conditions (weather, the mechanism and rate of radon transport in the soil, soil properties and conditions), uncertainty of method does not exceed 20%, while the combined standard uncertainty of radon exhalation rate measured from the soil surface does not exceed 30%. The results of the daily measurements of radon exhalation rate from the soil surface at the experimental site during one year are reported. Copyright © 2016 Elsevier Ltd. All rights reserved.

Selenium speciation in acidic environmental samples: application to acid rain-soil interaction at Mount Etna volcano.

PubMed

Floor, Geerke H; Iglesías, Mònica; Román-Ross, Gabriela; Corvini, Philippe F X; Lenz, Markus

2011-09-01

Speciation plays a crucial role in elemental mobility. However, trace level selenium (Se) speciation analyses in aqueous samples from acidic environments are hampered due to adsorption of the analytes (i.e. selenate, selenite) on precipitates. Such solid phases can form during pH adaptation up till now necessary for chromatographic separation. Thermodynamic calculations in this study predicted that a pH<4 is needed to prevent precipitation of Al and Fe phases. Therefore, a speciation method with a low pH eluent that matches the natural sample pH of acid rain-soil interaction samples from Etna volcano was developed. With a mobile phase containing 20mM ammonium citrate at pH 3, selenate and selenite could be separated in different acidic media (spiked water, rain, soil leachates) in <10 min with a LOQ of 0.2 μg L(-1) using (78)Se for detection. Applying this speciation analysis to study acid rain-soil interaction using synthetic rain based on H(2)SO(4) and soil samples collected at the flanks of Etna volcano demonstrated the dominance of selenate over selenite in leachates from samples collected close to the volcanic craters. This suggests that competitive behavior with sulfate present in acid rain might be a key factor in Se mobilization. The developed speciation method can significantly contribute to understand Se cycling in acidic, Al/Fe rich environments. Copyright © 2011 Elsevier Ltd. All rights reserved.

The viking biological investigation: preliminary results.

PubMed

Klein, H P; Horowitz, N H; Levin, G V; Oyama, V I; Lederberg, J; Rich, A; Hubbard, J S; Hobby, G L; Straat, P A; Berdahl, B J; Carle, G C; Brown, F S; Johnson, R D

1976-10-01

Three different types of biological experiments on samples of martian surface material ("soil") were conducted inside the Viking lander. In the carbon assimilation or pyrolytic release experiment, (14)CO(2) and (14)CO were exposed to soil in the presence of light. A small amount of gas was found to be converted into organic material. Heat treatment of a duplicate sample prevented such conversion. In the gas exchange experiment, soil was first humidified (exposed to water vapor) for 6 sols and then wet with a complex aqueous solution of metabolites. The gas above the soil was monitored by gas chromatography. A substantial amount of O(2) was detected in the first chromatogram taken 2.8 hours after humidification. Subsequent analyses revealed that significant increases in CO(2) and only small changes in N(2) had also occurred. In the labeled release experiment, soil was moistened with a solution containing several (14)C-labeled organic compounds. A substantial evolution of radioactive gas was registered but did not occur with a duplicate heat-treated sample. Alternative chemical and biological interpretations are possible for these preliminary data. The experiments are still in process, and these results so far do not allow a decision regarding the existence of life on the plonet Mars.

[Culturable psychrotolerant methanotrophic bacteria in landfill cover soil].

PubMed

Kallistova, A Iu; Montonen, L; Jurgens, G; Munster, U; Kevbrina, M V; Nozhevnikova, A N

2014-01-01

Methanotrophs closely related to psychrotolerant members of the genera Methylobacter and Methylocella were identified in cultures enriched at 10@C from landfill cover soil samples collected in the period from April to November. Mesophilic methanotrophs of the genera Methylobacter and Methylosinus were found in cultures enriched at 20 degrees C from the same cover soil samples. A thermotolerant methanotroph related to Methylocaldum gracile was identified in the culture enriched at 40 degrees C from a sample collected in May (the temperature of the cover soil was 11.5-12.5 degrees C). In addition to methanotrophs, methylobacteria of the genera Methylotenera and Methylovorus and members of the genera Verrucomicrobium, Pseudomonas, Pseudoxanthomonas, Dokdonella, Candidatus Protochlamydia, and Thiorhodospira were also identified in the enrichment cultures. A methanotroph closely related to the psychrotolerant species Methylobacter tundripaludum (98% sequence identity of 16S r-RNA genes with the type strain SV96(T)) was isolated in pure culture. The introduction of a mixture of the methanotrophic enrichments, grown at 15 degrees C, into the landfill cover soil resulted in a decrease in methane emission from the landfill surface in autumn (October, November). The inoculum used was demonstrated to contain methanotrophs closely related to Methylobacter tundripaludum SV96.

Innovative solidification/stabilization of lead contaminated soil using incineration sewage sludge ash.

PubMed

Li, Jiangshan; Poon, Chi Sun

2017-04-01

The proper treatment of lead (Pb) contaminated soils and incinerated sewage sludge ash (ISSA) has become an environmental concern. In this study, ordinary Portland cement (OPC) and blended OPC containing incinerated sewage sludge ash (ISSA) were used to solidify/stabilize (S/S) soils contaminated with different concentrations of Pb. After curing for 7 and 28 d, the S/S soils were subjected to a series of strength, leaching and microscopic tests. The results showed that replacement of OPC by ISSA significantly reduced the unconfined compressive strength (UCS) of S/S soils and leached Pb. In addition, the leaching of Pb from the monolithic samples was diffusion controlled, and increasing the ISSA addition in the samples led to a lower diffusion coefficient and thus an increase in the feasibility for "controlled utilization" of S/S soils. Furthermore, the proposed S/S method significantly decreased the amount of Pb associated with carbonates and increased the amount of organic and residual Pb in S/S soils, reflecting that the risk of Pb contaminated soils can be effectively mitigated by the incorporating of ISSA. Overall, the leachability of Pb was controlled by the combined effect of adsorption, encapsulation or precipitation in the S/S soils. Copyright © 2017 Elsevier Ltd. All rights reserved.

Biological Sterilization of Returned Mars Samples

NASA Technical Reports Server (NTRS)

Allen, C. C.; Albert, F. G.; Combie, J.; Bodnar, R. J.; Hamilton, V. E.; Jolliff, B. L.; Kuebler, K.; Wang, A.; Lindstrom, D. J.; Morris, P. A.

1999-01-01

Martian rock and soil, collected by robotic spacecraft, will be returned to terrestrial laboratories early in the next century. Current plans call for the samples to be immediately placed into biological containment and tested for signs of present or past life and biological hazards. It is recommended that "Controlled distribution of unsterilized materials from Mars should occur only if rigorous analyses determine that the materials do not constitute a biological hazard. If any portion of the sample is removed from containment prior to completion of these analyses it should first be sterilized." While sterilization of Mars samples may not be required, an acceptable method must be available before the samples are returned to Earth. The sterilization method should be capable of destroying a wide range of organisms with minimal effects on the geologic samples. A variety of biological sterilization techniques and materials are currently in use, including dry heat, high pressure steam, gases, plasmas and ionizing radiation. Gamma radiation is routinely used to inactivate viruses and destroy bacteria in medical research. Many commercial sterilizers use Co-60 , which emits gamma photons of 1.17 and 1.33 MeV. Absorbed doses of approximately 1 Mrad (10(exp 8) ergs/g) destroy most bacteria. This study investigates the effects of lethal doses of Co-60 gamma radiation on materials similar to those anticipated to be returned from Mars. The goals are to determine the gamma dose required to kill microorganisms in rock and soil samples and to determine the effects of gamma sterilization on the samples' isotopic, chemical and physical properties. Additional information is contained in the original extended abstract.

Phobos-Grunt Mission: Planetary Protection Issues and how to Solve Them (the Approaches Based on the Exobiological Experiments Results)

NASA Astrophysics Data System (ADS)

Novikova, Nataliya; Orlov, Oleg; Deshevaya, Elena; Sychev, Vladimir; Khamidullina, N.; Aleksashkin, Sergey; Martynov, Maxim

The launch of a Russian spaceship to Phobos is being planned in 2011 as a part of the project "Phobos-Soil". Major goals of the mission are: -Landing of the orbital vehicle (transport module) on the Phobos surface, collecting soil samples for delivery to Earth in a sealed inde-structible container; -Some experiments, including exobiological experiment aimed to evaluate viability of dormant organisms-representatives of a variety of taxonomic groups after extended interplanetary trip. According to COSPAR classification the orbital Mars spaceship flight is related to the category III and the mission of Phobos soil delivery to the Earth in a capsule on a descent vehicle is related to the category V to which any missions of return to the Earth are related. In order to supply Mars and Earth protection a number of actions is worked out: -The probability of space craft destruction and its falling down on the Mars surface is limited, and that is proved by the calculations; -The proposals to break the "chain of contact" with Earth of equipment used on the Phobos surface; -Preservation of tightness of the containers with Phobos soil and biological samples should be provided at all the stages of the mission up to the landing onto the Earth; -Phobos soil and biological samples delivery to specialized organiza-tion licensed to carry out works with highly dangerous microorganisms should be organized. So severe measures of the planet protection are based not only on the COSPAR demands, but also on the results of the Russian exobiological experiments, which proved that ability of survival in outer space was shown experimentally not only for spores of bacteria and microscopic fungi, but also for resting stages of higher organisms.

Geophagy practices and the content of chemical elements in the soil eaten by pregnant women in artisanal and small scale gold mining communities in Tanzania

PubMed Central

2014-01-01

Background Geophagy, a form of pica, is the deliberate consumption of soil and is relatively common across Sub-Saharan Africa. In Tanzania, pregnant women commonly eat soil sticks sold in the market (pemba), soil from walls of houses, termite mounds, and ground soil (kichuguu). The present study examined geophagy practices of pregnant women in a gold mining area of Geita District in northwestern Tanzania, and also examined the potential for exposure to chemical elements by testing soil samples. Method We conducted a cross sectional study using a convenience sample of 340 pregnant women, ranging in age from 15–49 years, who attended six government antenatal clinics in the Geita District, Tanzania. Structured interviews were conducted in June-August, 2012, to understand geophagy practices. In addition, soil samples taken from sources identified by pregnant women practicing geophagy were analysed for mineral element content. Results Geophagy was reported by 155 (45.6%) pregnant women with 85 (54.8%) initiating the practice in the first trimester. A total of 101 (65%) pregnant women reported eating soil 2 to 3 times per day while 20 (13%) ate soil more than 3 times per day. Of 155 pregnant women 107 (69%) bought pemba from local shops, while 48 (31%) consumed ground soil kichuguu. The estimated mean quantity of soil consumed from pemba was 62.5 grams/day. Arsenic, chromium, copper, iron, manganese, nickel and zinc levels were found in both pemba and kichuguu samples. Cadmium and mercury were found only in the kichuguu samples. Based on daily intake estimates, arsenic, copper and manganese for kichuguu and copper and manganese for pemba samples exceed the oral Minimum Risk Levels designated by the U.S. Agency for Toxic Substance and Disease Registry. Conclusion Almost 50% of participants practiced geophagy in Geita District consistent with other reports from Africa. Both pemba and kichuguu contained chemical elements at varying concentration, mostly above MRLs. As such, pregnant women who eat soil in Geita District are exposed to potentially high levels of chemical elements, depending upon frequency of consumption, daily amount consumed and the source location of soil eaten. PMID:24731450

Infiltration and soil erosion modelling on Lausatian post mine sites

NASA Astrophysics Data System (ADS)

Kunth, Franziska; Schmidt, Jürgen

2013-04-01

Land management of reclaimed lignite mine sites requires long-term and safe structuring of recultivation areas. Erosion by water leads to explicit soil losses, especially on heavily endangered water repellent and non-vegetated soil surfaces. Beyond that, weathering of pyrite-containing lignite burden dumps causes sulfuric acid-formation, and hence the acidification of groundwater, seepage water and surface waters. Pyrite containing sediment is detached by precipitation and transported into worked-out open cuts by draining runoff. In addition to ground water influence, erosion processes are therefore involved in acidification of surface waters. A model-based approach for the conservation of man-made slopes of post mining sites is the objective of this ongoing study. The study shall be completed by modeling of the effectiveness of different mine site recultivation scenarios. Erosion risks on man-made slopes in recultivation areas should be determined by applying the physical, raster- and event based computer model EROSION 2D/3D (Schmidt, 1991, 1992; v. Werner, 1995). The widely used erosion model is able to predict runoff as well as detachment, transport and deposition of sediments. Lignite burden dumps contain hydrophobic substances that cover soil particles. Consequently, these soils show strong water repellency, which influences the processes of infiltration and soil erosion on non-vegetated, coal containing dump soils. The influence of water repellency had to be implemented into EROSION 2D/3D. Required input data for soil erosion modelling (e.g. physical soil parameters, infiltration rates, calibration factors, etc.) were gained by soil sampling and rainfall experiments on non-vegetated as well as recultivated reclaimed mine sites in the Lusatia lignite mining region (southeast of Berlin, Germany). The measured infiltration rates on the non-vegetated water repellent sites were extremely low. Therefore, a newly developed water repellency-factor was applied to depict infiltration and erosion processes on water repellent dump soils. For infiltration modelling with EROSION 2D calibration factors (e.g. water repellency factor, skin-factor, etc.) were determined in different steps by calibrating computer modelled infiltration, respectively volume rate of flow to the measured data.

Toxicological responses of red-backed salamander (Plethodon cinereus) exposed to aged and amended soils containing lead.

PubMed

Bazar, Matthew A; Quinn, Michael J; Mozzachio, Kristie; Bleiler, John A; Archer, Christine R; Phillips, Carlton T; Johnson, Mark S

2010-05-01

The use of lead in military and civilian small arms projectiles is widely acknowledged to have resulted in high soil lead concentrations at many small arms ranges. These ranges are often adjacent to wildlife habitat or have become habitat when no longer used. To assess the potential toxicity of lead to terrestrial amphibians in contaminated areas, we exposed 100 red-backed salamanders (Plethodon cinereus) to either a control soil or one of four soil treatments amended with lead acetate for 28 days. Analytical mean soil concentrations were 14 (control), 553, 1700, 4700, and 9167 mg Pb/kg soil dry weight. An additional 60 salamanders were also exposed for 28 days to one of six field-collected soil samples from a small arms range and a skeet range. The field soil concentrations ranged from 11 (background) to 16,967 mg Pb/kg soil dry weight. Food consisted of uncontaminated flightless Drosophila melanogaster. Salamander survival was reduced in amended soil treatments of 4700 and 9167 mg/kg by 15% and 80%, respectively. Inappetence was observed at 4700 and 9167 mg/kg and growth decreased in the 9167 mg/kg treatment. Total white blood cells decreased 32% at 4700 mg/kg compared to controls and were 22% lower in the 9167 mg/kg treatment. In contrast, survival was 100% for all field-collected soils with no hematological effects. At 16,967 mg/kg there was evidence of soil avoidance and decreased growth. These data suggest marked differences in toxicity and bioavailability of the lead-amended soil in contrast to the field-collected soil containing lead.

Lunar regolith densification

NASA Technical Reports Server (NTRS)

Ko, Hon-Yim; Sture, Stein

1991-01-01

Core tube samples of the lunar regolith obtained during the Apollo missions showed a rapid increase in the density of the regolith with depth. Various hypotheses have been proposed for the possible cause of this phenomenon, including the densification of the loose regolith material by repeated shaking from the seismic tremors which have been found to occur at regular monthly intervals when the moon and earth are closest to one another. A test bed was designed to study regolith densification. This test bed uses Minnesota Lunar Simulant (MLS) to conduct shaking experiments in the geotechnical centrifuge with an inflight shake table system. By reproducing realistic in-situ regolith properties, the experiment also serves to test penetrator concepts. The shake table system was designed and used for simulation experiments to study effects of earthquakes on terrestrial soil structures. It is mounted on a 15 g-ton geotechnical centrifuge in which the self-weight induced stresses are replicated by testing an n-th scale model in a gravity field which is n times larger than Earth's gravity. A similar concept applies when dealing with lunar prototypes, where the gravity ratio required for proper simulation of lunar gravity effects is that between the centrifugal acceleration and the lunar gravity. Records of lunar seismic tremors, or moonquakes, were obtained. While these records are being prepared for use as the input data to drive the shake table system, records from the El Centro earthquake of 1940 are being used to perform preliminary tests, using a soil container which was previously used for earthquake studies. This container has a laminar construction, with the layers free to slide on each other, so that the soil motion during the simulated earthquake will not be constrained by the otherwise rigid boundaries. The soil model is prepared by pluviating the MLS from a hopper into the laminar container to a depth of 6 in. The container is mounted on the shake table and the centrifuge is operated to generate an acceleration of 10 times Earth's gravity or 60 times the lunar gravity, thus simulating a lunar regolith thickness of 30 ft. The shake table is then operated using the scaled 'moonquake' as the input motion. One or more model moonquakes are used in each experiment, after which the soil is analyzed for its density profile with depth. This is accomplished by removing from the soil bed a column of soil contained within a thin rubber sleeve which has been previously embedded vertically in the soil during pluviation. This column of soil is transferred to a gamma ray device, in which the gamma ray transmission transversely through the soil is measured and compared with standard calibration samples. In this manner, the density profile can be determined. Preliminary results to date are encouraging, and the Center plans to study the effects of duration of shaking, intensity of the shaking motion, and the frequency of the motion.

Agriculture in an area impacted by past uranium mining activities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carvalho, F. P.; Oliveira, J. M.; Neves, O.

2007-07-01

The shallow aquifer near the old Cunha Baixa uranium mine (Viseu, Portugal) was contaminated by acid mine drainage. Concentration of radionuclides in water from irrigation wells and in the topsoil layer of the agriculture fields nearby display enhanced concentrations of uranium, radium and polonium. Two types of agriculture land in this area were selected, one with enhanced and another with low uranium concentrations, for controlled growth of lettuce and potatoes. Plants were grown in replicate portions of land (two plots) in each soil type and were periodically irrigated with water from wells. In each soil, one plot was irrigated withmore » water containing low concentration of dissolved uranium and the other plot with water containing enhanced concentration of dissolved uranium. At the end of the growth season, plants were harvested and analysed, along with soil and irrigation water samples. Results show the accumulation of radionuclides in edible parts of plants, specially in the field plots with higher radionuclide concentrations in soil. Radionuclides in irrigation water contributed less to the radioactivity accumulated in plants than radionuclides from soils. (authors)« less

Feasibility of diffuse reflectance infrared Fourier spectroscopy (DRIFTS) to quantify iron-cyanide (Fe-CN) complexes in soil

NASA Astrophysics Data System (ADS)

Sut-Lohmann, Magdalena; Raab, Thomas

2017-04-01

Contaminated sites create a significant risk to human health, by poisoning drinking water, soil, air and as a consequence food. Continuous release of persistent iron-cyanide (Fe-CN) complexes from various industrial sources poses a high hazard to the environment and indicates the necessity to analyze considerable amount of samples. At the present time quantitative determination of Fe-CN concentration in soil usually requires a time consuming two step process: digestion of the sample (e.g., micro distillation system) and its analytical detection performed, e.g., by automated spectrophotometrical flow injection analysis (FIA). In order to determine the feasibility of diffuse reflectance infrared Fourier spectroscopy (DRIFTS) to quantify the Fe-CN complexes in soil matrix, 42 soil samples were collected (8 to 12.520 mg kg-1CN) indicating single symmetrical CN band in the range 2092 - 2084 cm-1. Partial least squares (PLS) calibration-validation model revealed IR response to CNtot exceeding 1268 mg kg-1 (limit of detection, LOD). Subsequently, leave-one-out cross-validation (LOO-CV) was performed on soil samples containing low CNtot (<900 mg kg-1), which improved the sensitivity of the model by reducing the LOD to 154 mg kg-1. Finally, the LOO-CV conducted on the samples with CNtot >900 mg kg-1 resulted in LOD equal to 3494 mg kg-1. Our results indicate that spectroscopic data in combination with PLS statistics can efficiently be used to predict Fe-CN concentrations in soil. We conclude that the protocol applied in this study can strongly reduce the time and costs essential for the spatial and vertical screening of the site affected by complexed Fe-CN.

Uptake of explosives from contaminated soil by existing vegetation at the Iowa Army Ammunition Plant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schneider, J.F.; Zellmer, S.D.; Tomczyk, N.A.

This study examines the uptake of explosives by existing vegetation growing in soils contaminated with 2,4,6-trinitrotoluene (TNT) and 1,3,5-trinitro-3,5-triazine (RDX) in three areas at the Iowa Army Ammunition Plant (IAAP). To determine explosives uptake under natural environmental conditions, existing plant materials and soil from the root zone were sampled at different locations in each area, and plant materials were separated by species. Standard methods were used to determine the concentrations of explosives, their derivatives, and metabolites in the soil samples. Plant materials were also analyzed. The compound TNT was not detected in the aboveground portion of plants, and vegetation growingmore » on TNT-contaminated soils is not considered a health hazard. However, soil and plant roots may contain TNT degradation products that may be toxic; hence, their consumption is not advised. The compound RDX was found in the tops and roots of plants growing on RDX-contaminated soils at all surveyed sites. Although RDX is not a listed carcinogen, several of its potentially present degradation products are carcinogens. Therefore, the consumption of any plant tissues growing on RDX-contaminated sites should be considered a potential health hazard.« less

Brazilian Cerrado soil Actinobacteria ecology.

PubMed

Suela Silva, Monique; Naves Sales, Alenir; Teixeira Magalhães-Guedes, Karina; Ribeiro Dias, Disney; Schwan, Rosane Freitas

2013-01-01

A total of 2152 Actinobacteria strains were isolated from native Cerrado (Brazilian Savannah) soils located in Passos, Luminárias, and Arcos municipalities (Minas Gerais State, Brazil). The soils were characterised for chemical and microbiological analysis. The microbial analysis led to the identification of nine genera (Streptomyces, Arthrobacter, Rhodococcus, Amycolatopsis, Microbacterium, Frankia, Leifsonia, Nakamurella, and Kitasatospora) and 92 distinct species in both seasons studied (rainy and dry). The rainy season produced a high microbial population of all the aforementioned genera. The pH values of the soil samples from the Passos, Luminárias, and Arcos regions varied from 4.1 to 5.5. There were no significant differences in the concentrations of phosphorus, magnesium, and organic matter in the soils among the studied areas. Samples from the Arcos area contained large amounts of aluminium in the rainy season and both hydrogen and aluminium in the rainy and dry seasons. The Actinobacteria population seemed to be unaffected by the high levels of aluminium in the soil. Studies are being conducted to produce bioactive compounds from Actinobacteria fermentations on different substrates. The present data suggest that the number and diversity of Actinobacteria spp. in tropical soils represent a vast unexplored resource for the biotechnology of bioactives production.

Brazilian Cerrado Soil Actinobacteria Ecology

PubMed Central

Suela Silva, Monique; Naves Sales, Alenir; Teixeira Magalhães-Guedes, Karina; Ribeiro Dias, Disney; Schwan, Rosane Freitas

2013-01-01

A total of 2152 Actinobacteria strains were isolated from native Cerrado (Brazilian Savannah) soils located in Passos, Luminárias, and Arcos municipalities (Minas Gerais State, Brazil). The soils were characterised for chemical and microbiological analysis. The microbial analysis led to the identification of nine genera (Streptomyces, Arthrobacter, Rhodococcus, Amycolatopsis, Microbacterium, Frankia, Leifsonia, Nakamurella, and Kitasatospora) and 92 distinct species in both seasons studied (rainy and dry). The rainy season produced a high microbial population of all the aforementioned genera. The pH values of the soil samples from the Passos, Luminárias, and Arcos regions varied from 4.1 to 5.5. There were no significant differences in the concentrations of phosphorus, magnesium, and organic matter in the soils among the studied areas. Samples from the Arcos area contained large amounts of aluminium in the rainy season and both hydrogen and aluminium in the rainy and dry seasons. The Actinobacteria population seemed to be unaffected by the high levels of aluminium in the soil. Studies are being conducted to produce bioactive compounds from Actinobacteria fermentations on different substrates. The present data suggest that the number and diversity of Actinobacteria spp. in tropical soils represent a vast unexplored resource for the biotechnology of bioactives production. PMID:23555089

Howardites - Samples of the regolith of the eucrite parent-body: Petrology of Frankfort, Pavlovka, Yurtuk, Malvern, and ALHA 77302

NASA Technical Reports Server (NTRS)

Labotka, T. C.; Papike, J. J.

1980-01-01

Modal petrographic methods have been applied to the meteorites Frankfort, Pavlovka, Yurtuk, Malvern, and ALHA 77302, to determine some of the characteristics of the regolith of the eucrite parent body. Lithic clasts in the meteorites fall into three major groups: pyroxene + plagioclase rocks, orthopyroxenites, and fused-soil clasts. Lithic clasts make up a small proportion of the soil; mineral clasts from orthopyroxenites dominate the coarse-grained fraction; and the fine-grained fraction contains minerals from both orthopyroxenites and plagioclase + pyroxene rocks. The eucrite regolith appears to have the following characteristics: the source rocks are friable, the soils are immature, comminution is the major soil-forming process, and the soil is well mixed.

Comparison of Soil Organic Matter Dynamics at Four Temperate Deciduous Forests with Physical Fractionation and Radiocarbon Measurements

NASA Astrophysics Data System (ADS)

McFarlane, K. J.; Torn, M. S.; Hanson, P. J.; Swanston, C.; Guilderson, T. P.; Porras, R. C.

2009-12-01

Forest soils represent a significant pool for C sequestration and storage, but the factors controlling soil C cycling are not well constrained. We used density fractionation and radiocarbon measurements to assess differences in soil C cycling amongst four eastern deciduous forests that are part of the AmeriFlux Network and vary in climate, soil type, parent material, and soil ecology. We collected mineral soil from 0-5 cm and 5-15 cm depth at Harvard Forest (HAF) in central Massachusetts, Bartlett Experimental Forest (BEF) in New Hampshire, the University of Michigan Biological Station (UMBS), and Baskett Wildlife Recreation and Education Area in the Missouri Ozarks (MOZ). Deeper soil samples have been collected (to 75 cm in some cases) for future analysis. We fractionated soil samples by density into free light (unprotected SOM), occluded light (physically protected SOM), and dense (mineral-protected) fractions using sodium polytungstate (1.65 g ml-1), measured C concentration and radiocarbon in bulk soil and fractions, and used a three-pool steady-state model to determine radiocarbon-based turnover times for fractions. The northeastern sites, HAF and BEF, had higher bulk soil C (65 and 40 g C kg soil-1, respectively) than did MOZ or UMBS (20 and 10 g C kg soil-1). Bulk soil radiocarbon values (Δ14C) decreased with depth and were lower at northeastern sites than Midwestern sites (36, 8, 113, and 65 ‰ for 0-5 cm at HF, BEF, MOZ, and UMBS, respectively). Soil C distribution amongst fractions was similar at HAF, BEF, and MOZ with the unprotected free light fraction containing about 40% of bulk soil C for 0-5 cm and 20% of bulk soil C for 5-15 cm. At these three sites, the physically protected occluded light fraction contained about 10% of bulk soil C, with the mineral-protected dense fraction containing the remaining 50-70%. In contrast, UMBS, the site with the sandiest soil, had a greater portion of bulk soil C recovered in the unprotected free light fraction and very little C recovered in the occluded light fraction. Radiocarbon-based SOM turnover times for the sites suggest that soil carbon pools in all three fractions turn over much more quickly at MOZ, the warmest site, than at the other sites. In addition, turnover times for free and occluded light fractions were slower at UMBS and BEF, the coolest sites, than at HAF and MOZ. These results suggest that soil type and climate interact to control soil organic matter cycling. Specifically, soil organic matter decomposition is slower in cooler than in warmer climates and there is more physically protected C in soils of finer texture, at least at the scale encompassed by our study. Acknowledgments This work was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344 and by Lawrence Berkeley National Laboratory under Contract DE-AC02-05CH11231.

Aspergillus flavus aflatoxin occurrence and expression of aflatoxin biosynthesis genes in soil.

PubMed

Accinelli, Cesare; Abbas, H K; Zablotowicz, R M; Wilkinson, J R

2008-05-01

The carcinogen aflatoxin B1 (AFB1) produced by Aspergillus flavus is a major food safety concern in crops. However, information on AFB1 occurrence in soil and crop residue is scarce. A series of experiments investigated the occurrence of AFB1 in soil and corn residues and ascertained the ecology of A. flavus in a Dundee silt loam soil. Samples of untilled soil (0-2 cm) and residues were collected in March 2007 from plots previously planted with a corn isoline containing the Bacillus thuringiensis (Bt) endotoxin gene or the parental non-Bt isoline. AFB1 levels were significantly different in various corn residues. The highest AFB1 levels were observed in cobs containing grain, with 145 and 275 ng.g-1 in Bt and non-Bt, respectively (P > or = F = 0.001). Aflatoxin levels averaged 3.3 and 9.6 ng.g-1 in leaves and (or) stalks and cobs without grain, respectively. All soils had AFB1 ranging from 0.6 to 5.5 ng.g-1 with similar levels in plots from Bt and non-Bt corn. Based on cultural methods, soil contained from log10 3.1 to 4.5 A. flavus cfu.g-1 with about 60% of isolates producing aflatoxin. Laboratory experiments demonstrated that AFB1 is rapidly degraded in soil at 28 degrees C (half-life < or = 5 days). The potential of the soil A. flavus to produce aflatoxins was confirmed by molecular methods. Transcription of 5 aflatoxin biosynthesis genes, including aflD, aflG, aflP, aflR, and aflS, were detected by reverse transcription - polymerase chain reaction analysis in soil. Although AFB1 appears to be transient in soils, it is clear that AFB1 is produced in surface soil in the presence of corn residues, as indicated by A. flavus cfu levels, AFB1 detection, and expression of aflatoxin biosynthetic genes.

Carbon and Sulfur Isotopic Composition of Rocknest Soil as Determined with the Sample Analysis at Mars(SAM) Quadrupole Mass Spectrometer

NASA Technical Reports Server (NTRS)

Franz, H. B.; McAdam, C.; Stern, J. C.; Archer, P. D., Jr.; Sutter, B.; Grotzinger, J. P.; Jones, J. H.; Leshin, L. A.; Mahaffy, P. R.; Ming, D. W.;

Arsenic Speciation and Extraction and the Significance of Biodegradable Acid on Arsenic Removal—An Approach for Remediation of Arsenic-Contaminated Soil

PubMed Central

Nguyen Van, Thinh; Osanai, Yasuhito; Do Nguyen, Hai; Kurosawa, Kiyoshi

2017-01-01

A series of arsenic remediation tests were conducted using a washing method with biodegradable organic acids, including oxalic, citric and ascorbic acids. Approximately 80% of the arsenic in one sample was removed under the effect of the ascorbic and oxalic acid combination, which was roughly twice higher than the effectiveness of the ascorbic and citric acid combination under the same conditions. The soils treated using biodegradable acids had low remaining concentrations of arsenic that are primarily contained in the crystalline iron oxides and organic matter fractions. The close correlation between extracted arsenic and extracted iron/aluminum suggested that arsenic was removed via the dissolution of Fe/Al oxides in soils. The fractionation of arsenic in four contaminated soils was investigated using a modified sequential extraction method. Regarding fractionation, we found that most of the soil contained high proportions of arsenic (As) in exchangeable fractions with phosphorus, amorphous oxides, and crystalline iron oxides, while a small amount of the arsenic fraction was organic matter-bound. This study indicated that biodegradable organic acids can be considered as a means for arsenic-contaminated soil remediation.

Prediction of hydrocarbon surface seepage potential using infiltrometer data

NASA Astrophysics Data System (ADS)

Connors, J. J.; Jackson, J. L.; Engle, R. A.; Connors, J. L.

2017-12-01

Environmental regulations addressing above-ground storage tank (AST) spill control activities typically require owners/operators to demonstrate that local soil permeability values are low enough to adequately contain released liquids while emergency-response procedures are conducted. Frequently, geotechnical borings and soil samples/analyses, and/or monitoring well slug-test analyses, are used to provide hydraulic conductivity data for the required calculations. While these techniques are useful in assessing hydrological characteristics of the subsurface, they do not always assess the uppermost surface soil layer, where the bulk of the containment can occur. This layer may have been subject to long-term permeability-reduction by activities such as compaction by vehicular and foot traffic, micro-coatings by hydrophobic pollutants, etc. This presentation explores the usefulness of dual-ring infiltrometers, both in field and bench-scale tests, to rapidly acquire actual hydraulic conductivity values of surficial soil layers, which can be much lower than subsurface values determined using more traditional downhole geotechnical and hydrogeological approaches.

Assessment of Trace Metals in Soil, Vegetation and Rodents in Relation to Metal Mining Activities in an Arid Environment.

PubMed

Méndez-Rodríguez, Lia C; Alvarez-Castañeda, Sergio Ticul

2016-07-01

Areas where abandoned metal-extraction mines are located contain large quantities of mineral wastes derived from environmentally unsafe mining practices. These wastes contain many pollutants, such as heavy metals, which could be released to the environment through weathering and leaching, hence becoming an important source of environmental metal pollution. This study evaluates differences in the levels of lead, iron, nickel, manganese, copper and cadmium in rodents sharing the same type of diet under different microhabitat use in arid areas with past mining activities. Samples of soil, roots, branches and seeds of Palo Adán (Fouquieria diguetii) and specimens of two rodent species (Chaetodipus arenarius and C. spinatus) were collected in areas with impact from past metal mining activities as well as from areas with no mining impact. Both rodent species mirrored nickel and iron levels in soil and seeds, as well as lead levels in soil; however, C. arenarius accumulated higher levels of manganese, copper and cadmium.

Elemental Analysis of the JSC Mars-1 Soil Simulant using Laser Ablation and Magnetic Separation

NASA Technical Reports Server (NTRS)

Nasab, Ahab S.

2005-01-01

Future long-duration missions to Mars require capabilities in terms of manufacture of structures and chemical compounds essential for human habitat and exploratory activities. Currently, it is not feasible to import all the required raw and finished materials from Earth. In fact, essential items such as structural members as well as various gases for human consumption and material processing need to be largely extracted from the available planetary resources. The resources on Mars include its soil and rocks, its atmosphere and the polar caps. Mars atmosphere consists of 95% carbon dioxide and the balance contains small percentages of oxygen, nitrogen, and argon. The Mars regolith contains many metal oxides in various mineralogical forms. Presently, Martian soil samples are not available. However, a closely matched Martian soil simulant developed by the Johnson Space Center has been available for scientific research and engineering studies. The chemical makeup of this simulant is compared with the data from Viking Lander and Path Finder missions are shown..

U-Th-Pb systematics of some Apollo 16 lunar samples

NASA Technical Reports Server (NTRS)

Nunes, P. D.; Tatsumoto, M.; Knight, R. J.; Unruh, D. M.; Doe, B. R.

1973-01-01

U, Th, and Pb concentrations and lead isotopic compositions of Apollo 16 samples are interpreted as follows: (1) an early period of lunar differentiation of either global or regional scale occurred about 4.47 b.y. ago; (2) the Imbrian impact event affected many Apollo 16 samples about 3.99 b.y. ago; (3) some Apollo 16 metaclastic rocks and breccias contain a large amount of KREEP-like material; (4) lead produced in the early history of the moon has been concentrated in lunar highland soils yielding high Pb-207/Pb-206 ratios corresponding to apparent ages of more than 4.8 b.y.; and (5) South Ray Crater soils reflect the approximately 2-b.y.-old event previously proposed for the Apollo 12 and 14 samples.

Characterization of Martian Soil Fines Fraction in SNC Meteorites

NASA Technical Reports Server (NTRS)

Rao, M. N.; McKay, D. S.

2003-01-01

Some impact-melt glasses in shergottite meteorites contain large abundances of martian atmospheric noble gases with high (129)Xe/(132)Xe ratios, accompanied by varying (87)Sr/(86)Sr (initial) ratios. These glasses contain Martian Soil Fines (MSF) probably from young volcanic terrains such as Tharsis or Elysium Mons. The composition of the MSF bearing samples is different from the average bulk composition of the host rock. These samples show the following charecteristics: a) simultaeneous enrichment of the felsic component and depletion of the mafic component relative to the host phase and b) significant secondary sulfur/sulfate excesses over the host material. The degree of enrichment and associated depletion varies from one sample to another. Earlier, we found large enrichments of felsic (Al, Ca, Na and K) component and depletion of mafic (Fe, Mg, Mn and Ti) component in several impact melt glass veins and pods of samples ,77 ,78 , 18, and ,20A in EET79001 accompanied by large sulfur/sulfate excesses. Based on these results, we proposed a model where the comminution of basaltic rocks takes place by meteoroid bombardment on the martian surface, leading to the generation of fine-grained soil near the impact sites. This fine-grained soil material is subsequently mobilized by saltation and deflation processes on Mars surface due to pervasive aeolian activity. This movement results in mechanical fractionation leading to the felsic enrichment and mafic depletion in the martian dust. We report, here, new data on an impact-melt inclusion ,507 (PAPA) from EET79001, Lith B and ,506 (ALPHA) from EET79001, Lith A and compare the results with those obtained on Shergotty impact melt glass (DBS).

Biodegradation of simazine in olive fields.

PubMed

Santiago, R; De Prado, R; Franco, A R

2003-01-01

Simazine (2-chloro-4, bis ethylamino-1,3,5-triazine) is a herbicide of the s-triazine group used mainly to control broad-leaved weeds in different crops. Several papers report about simazine and other s-triazine derivates as being actual polluting agents. In fact, simazine has been detected in groundwater and soil. Since this herbicide has been extensively used in Andalusia (south of Spain), we are analyzing the levels of simazine residues found in the soil of olive fields. We are also simazine could be detected isolating live micro organisms able to degrade this compound, and are characterizing the metabolic pathways leading to this degradation and the fate of this compound in nature. With all these data in mind, we will try to develop a strategy for the bioremediation of contaminated soils. We have taken samples of soil from many olive orchards of Andalusia that have been treated with simazine. These samples were located with the help of a handheld GPS. The presence of simazine of these samples was detected by HPLC. In most of the samples taken no, and those where it could be, contained very low levels of this herbicide (lower than 0.5 ppm). Soil samples are being characterized to determine their physicochemical characteristics [pH, organic matter, texture, etc), and we are attempting to correlate all these parameters with the presence or absence of simazine. From some of the soils, we have isolated a group of micro organisms that can grow using simazine as the sole carbon and nitrogen sources. We are analyzing how the addition of carbon or nitrogen can influence the rate of the simazine degradation.

Digital soil mapping using remote sensing indices, terrain attributes, and vegetation features in the rangelands of northeastern Iran.

PubMed

Mahmoudabadi, Ebrahim; Karimi, Alireza; Haghnia, Gholam Hosain; Sepehr, Adel

2017-09-11

Digital soil mapping has been introduced as a viable alternative to the traditional mapping methods due to being fast and cost-effective. The objective of the present study was to investigate the capability of the vegetation features and spectral indices as auxiliary variables in digital soil mapping models to predict soil properties. A region with an area of 1225 ha located in Bajgiran rangelands, Khorasan Razavi province, northeastern Iran, was chosen. A total of 137 sampling sites, each containing 3-5 plots with 10-m interval distance along a transect established based on randomized-systematic method, were investigated. In each plot, plant species names and numbers as well as vegetation cover percentage (VCP) were recorded, and finally one composite soil sample was taken from each transect at each site (137 soil samples in total). Terrain attributes were derived from a digital elevation model, different bands and spectral indices were obtained from the Landsat7 ETM+ images, and vegetation features were calculated in the plots, all of which were used as auxiliary variables to predict soil properties using artificial neural network, gene expression programming, and multivariate linear regression models. According to R 2 RMSE and MBE values, artificial neutral network was obtained as the most accurate soil properties prediction function used in scorpan model. Vegetation features and indices were more effective than remotely sensed data and terrain attributes in predicting soil properties including calcium carbonate equivalent, clay, bulk density, total nitrogen, carbon, sand, silt, and saturated moisture capacity. It was also shown that vegetation indices including NDVI, SAVI, MSAVI, SARVI, RDVI, and DVI were more effective in estimating the majority of soil properties compared to separate bands and even some soil spectral indices.

Leveraging Machine Learning to Estimate Soil Salinity through Satellite-Based Remote Sensing

NASA Astrophysics Data System (ADS)

Welle, P.; Ravanbakhsh, S.; Póczos, B.; Mauter, M.

2016-12-01

Human-induced salinization of agricultural soils is a growing problem which now affects an estimated 76 million hectares and causes billions of dollars of lost agricultural revenues annually. While there are indications that soil salinization is increasing in extent, current assessments of global salinity levels are outdated and rely heavily on expert opinion due to the prohibitive cost of a worldwide sampling campaign. A more practical alternative to field sampling may be earth observation through remote sensing, which takes advantage of the distinct spectral signature of salts in order to estimate soil conductivity. Recent efforts to map salinity using remote sensing have been met with limited success due to tractability issues of managing the computational load associated with large amounts of satellite data. In this study, we use Google Earth Engine to create composite satellite soil datasets, which combine data from multiple sources and sensors. These composite datasets contain pixel-level surface reflectance values for dates in which the algorithm is most confident that the surface contains bare soil. We leverage the detailed soil maps created and updated by the United States Geological Survey as label data and apply machine learning regression techniques such as Gaussian processes to learn a smooth mapping from surface reflection to noisy estimates of salinity. We also explore a semi-supervised approach using deep generative convolutional networks to leverage the abundance of unlabeled satellite images in producing better estimates for salinity values where we have relatively fewer measurements across the globe. The general method results in two significant contributions: (1) an algorithm that can be used to predict levels of soil salinity in regions without detailed soil maps and (2) a general framework that serves as an example for how remote sensing can be paired with extensive label data to generate methods for prediction of physical phenomenon.

Employing a portable X-Ray fluorescence (P-XRF) analyser and GIS to identify and map heavy metal pollution in soils of a traditional bonfire site

NASA Astrophysics Data System (ADS)

Dao, Ligang; Zhang, Chaosheng; Morrison, Liam

2010-05-01

Soils in the vicinity of bonfires are recipients of metal contaminants from burning of metal-containing materials. In order to better understand the impacts of bonfires on soils, a total of 218 surface soil samples were collected from a traditional bonfire site in Galway City, Ireland. Concentrations of Cu, Pb and Zn were determined using a portable X-ray Fluorescence (P-XRF) analyser. Strong variations were observed for these metals, and several samples contained elevated Zn concentrations which exceeded the intervention threshold of the Dutch criteria (720 mg kg-1). Spatial clusters and spatial outliers were detected using the local Moran's I index and were mapped using GIS. Two clear high value spatial clusters could be observed on the upper left side and centre part of the study area for Cu, Pb and Zn. Results of variogram analyses showed high nugget-sill-ratios for Cu, Pb and Zn, indicating strong spatial variation over short distances which could be resulted from anthropogenic activities. The spatial interpolation method of ordinary kriging was applied to produce the spatial interpolation maps for Cu, Pb and Zn, and the areas with elevated concentrations were in line with historical locations of the bonfires. The hazard maps showed small parts of the study area with Zn concentrations exceeding the Dutch intervention values. In order to prevent further contamination from bonfires, it is advised that tyres and other metal-containing wastes should not be burnt. The results in this study provide useful information for management of bonfires.

GEMAS: Unmixing magnetic properties of European agricultural soil

NASA Astrophysics Data System (ADS)

Fabian, Karl; Reimann, Clemens; Kuzina, Dilyara; Kosareva, Lina; Fattakhova, Leysan; Nurgaliev, Danis

2016-04-01

High resolution magnetic measurements provide new methods for world-wide characterization and monitoring of agricultural soil which is essential for quantifying geologic and human impact on the critical zone environment and consequences of climatic change, for planning economic and ecological land use, and for forensic applications. Hysteresis measurements of all Ap samples from the GEMAS survey yield a comprehensive overview of mineral magnetic properties in European agricultural soil on a continental scale. Low (460 Hz), and high frequency (4600 Hz) magnetic susceptibility k were measured using a Bartington MS2B sensor. Hysteresis properties were determined by a J-coercivity spectrometer, built at the paleomagnetic laboratory of Kazan University, providing for each sample a modified hysteresis loop, backfield curve, acquisition curve of isothermal remanent magnetization, and a viscous IRM decay spectrum. Each measurement set is obtained in a single run from zero field up to 1.5 T and back to -1.5 T. The resulting data are used to create the first continental-scale maps of magnetic soil parameters. Because the GEMAS geochemical atlas contains a comprehensive set of geochemical data for the same soil samples, the new data can be used to map magnetic parameters in relation to chemical and geological parameters. The data set also provides a unique opportunity to analyze the magnetic mineral fraction of the soil samples by unmixing their IRM acquisition curves. The endmember coefficients are interpreted by linear inversion for other magnetic, physical and chemical properties which results in an unprecedented and detailed view of the mineral magnetic composition of European agricultural soils.

Assessment of soil-gas and soil contamination at the South Prong Creek Disposal Area, Fort Gordon, Georgia, 2009-2010

USGS Publications Warehouse

Caldwell, Andral W.; Falls, W. Fred; Guimaraes, Wladmir B.; Ratliff, W. Hagan; Wellborn, John B.; Landmeyer, James E.

2011-01-01

Soil gas and soil were assessed for contaminants at the South Prong Creek Disposal Area at Fort Gordon, Georgia, from October 2009 to September 2010. The assessment included identifying and delineating organic contaminants present in soil-gas and inorganic contaminants present in soil samples collected from the area estimated to be the South Prong Creek Disposal Area, including two seeps and the hyporheic zone. This assessment was conducted to provide environmental contamination data to Fort Gordon personnel pursuant to requirements for the Resource Conservation and Recovery Act Part B Hazardous Waste Permit process. All soil-gas samplers in the two seeps and the hyporheic zone contained total petroleum hydrocarbons above the method detection level. The highest total petroleum hydrocarbon concentration detected from the two seeps was 54.23 micrograms per liter, and the highest concentration in the hyporheic zone was 344.41 micrograms per liter. The soil-gas samplers within the boundary of the South Prong Creek Disposal Area and along the unnamed road contained total petroleum hydrocarbon mass above the method detection level. The highest total petroleum hydrocarbon mass detected was 147.09 micrograms in a soil-gas sampler near the middle of the unnamed road that traverses the South Prong Creek Disposal Area. The highest undecane mass detected was 4.48 micrograms near the location of the highest total petroleum hydrocarbon mass. Some soil-gas samplers detected undecane mass greater than the method detection level of 0.04 micrograms, with the highest detection of toluene mass of 109.72 micrograms in the same location as the highest total petroleum hydrocarbon mass. Soil-gas samplers installed in areas of high contaminant mass had no detections of explosives and chemical agents above their respective method detection levels. Inorganic concentrations in five soil samples did not exceed regional screening levels established by the U.S. Environmental Protection Agency. Barium concentrations, however, were up to four times higher than the background concentrations reported in similar Coastal Plain sediments of South Carolina.

Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons

DOE PAGES

Penton, C. Ryan; Gupta, Vadakattu V. S. R.; Yu, Julian; ...

2016-06-02

We examined the effect of different soil sample sizes obtained from an agricultural field, under a single cropping system uniform in soil properties and aboveground crop responses, on bacterial and fungal community structure and microbial diversity indices. DNA extracted from soil sample sizes of 0.25, 1, 5, and 10 g using MoBIO kits and from 10 and 100 g sizes using a bead-beating method (SARDI) were used as templates for high-throughput sequencing of 16S and 28S rRNA gene amplicons for bacteria and fungi, respectively, on the Illumina MiSeq and Roche 454 platforms. Sample size significantly affected overall bacterial and fungalmore » community structure, replicate dispersion and the number of operational taxonomic units (OTUs) retrieved. Richness, evenness and diversity were also significantly affected. The largest diversity estimates were always associated with the 10 g MoBIO extractions with a corresponding reduction in replicate dispersion. For the fungal data, smaller MoBIO extractions identified more unclassified Eukaryota incertae sedis and unclassified glomeromycota while the SARDI method retrieved more abundant OTUs containing unclassified Pleosporales and the fungal genera Alternaria and Cercophora. Overall, these findings indicate that a 10 g soil DNA extraction is most suitable for both soil bacterial and fungal communities for retrieving optimal diversity while still capturing rarer taxa in concert with decreasing replicate variation.« less

Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons

DOE Office of Scientific and Technical Information (OSTI.GOV)

Penton, C. Ryan; Gupta, Vadakattu V. S. R.; Yu, Julian

We examined the effect of different soil sample sizes obtained from an agricultural field, under a single cropping system uniform in soil properties and aboveground crop responses, on bacterial and fungal community structure and microbial diversity indices. DNA extracted from soil sample sizes of 0.25, 1, 5, and 10 g using MoBIO kits and from 10 and 100 g sizes using a bead-beating method (SARDI) were used as templates for high-throughput sequencing of 16S and 28S rRNA gene amplicons for bacteria and fungi, respectively, on the Illumina MiSeq and Roche 454 platforms. Sample size significantly affected overall bacterial and fungalmore » community structure, replicate dispersion and the number of operational taxonomic units (OTUs) retrieved. Richness, evenness and diversity were also significantly affected. The largest diversity estimates were always associated with the 10 g MoBIO extractions with a corresponding reduction in replicate dispersion. For the fungal data, smaller MoBIO extractions identified more unclassified Eukaryota incertae sedis and unclassified glomeromycota while the SARDI method retrieved more abundant OTUs containing unclassified Pleosporales and the fungal genera Alternaria and Cercophora. Overall, these findings indicate that a 10 g soil DNA extraction is most suitable for both soil bacterial and fungal communities for retrieving optimal diversity while still capturing rarer taxa in concert with decreasing replicate variation.« less

Pesticides in persimmons, jujubes and soil from China: Residue levels, risk assessment and relationship between fruits and soils.

PubMed

Liu, Yihua; Li, Shiliang; Ni, Zhanglin; Qu, Minghua; Zhong, Donglian; Ye, Caifen; Tang, Fubin

2016-01-15

Extreme and uncontrolled usage of pesticides produces a number of problems for vegetation and human health. In this study, the existence of organophosphates (OPs), organochlorines (OCs), pyrethroids (PYs) and fungicides (FUs) were investigated in persimmons/jujubes and their planted soils, which were collected from China. One OP (dimethoate), three OCs (DDT, quintozene and aldrin), six PYs (bifenthrin, fenpropathrin, cyhalothrin, cypermethrin, fenvalerate and deltamethrin) and two FUs (triadimefon and buprofezin) were found in 36.4% of persimmons and 70.8% of jujubes, with concentrations from 1.0 μg/kg to 2945.0 μg/kg. The most frequently detected pesticides in the two fruits were fenpropathrin in persimmons and cypermethrin in jujubes, with the detection frequencies of 30.0% and 22.7%, respectively. The residues of 4.5% (persimmon) and 25.0% (jujube) of samples were higher than the maximum residue limits (MRLs) of China. Compared with the fruits, more types of pesticides and higher residues were observed in their planted soils. The most frequently detected pesticides were HCH in persimmon soil and DDT in jujube soil, with the detection frequencies of 10.9% and 12.7%, respectively. For the tested samples, 39.1% of fruit samples and 63.0% of soil samples with multiple residues (containing more than two pesticides) were noted, even up to 8 residues in fruits and 14 residues in soils. Except for cyhalothrin, the other short-term risks for the tested pesticides in the fruits were below 10%, and the highest long-term risk was 14.13% for aldrin and dieldrin. There was no significant health risk for consumers via consumption of the two fruits. Copyright © 2015 Elsevier B.V. All rights reserved.

RHIZOSPHERE MICROBIOLOGY OF CHLORINATED ETHENE CONTAMINATED SOILS: EFFECTS ON PHOSPHOLIPID FATTY ACID CONTENT

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brigmon, R. L.; Stanhopc, A.; Franck, M. M.

2005-05-26

Microbial degradation of chlorinated ethenes (CE) in rhizosphere soils was investigated at seepline areas impacted by CE plumes. Successful bioremediation of CE in rhizosphere soils is dependent on microbial activity, soil types, plant species, and groundwater CE concentrations. Seepline soils were exposed to trichloroethylene (TCE) and perchloroethylene (PCE) in the 10-50 ppb range. Greenhouse soils were exposed to 2-10 ppm TCE. Plants at the seepline were poplar and pine while the greenhouse contained sweet gum, willow, pine, and poplar. Phospholipid fatty acid (PLFA) analyses were performed to assess the microbial activity in rhizosphere soils. Biomass content was lowest in themore » nonvegetated control soil and highest in the Sweet Gum soil. Bacterial rhizhosphere densities, as measured by PLFA, were similar in different vegetated soils while fungi biomass was highly variable. The PLFA soil profiles showed diverse microbial communities primarily composed of Gram-negative bacteria. Adaptation of the microbial community to CE was determined by the ratio of {omega}7t/{omega}7c fatty acids. Ratios (16:1{omega}7v16:1{omega}7c and 18:l{omega}7t/18:1{omega}7c) greater than 0.1 were demonstrated in soils exposed to higher CE concentrations (10-50 ppm), indicating an adaptation to CE resulting in decreased membrane permeability. Ratios of cyclopropyl fatty acids showed that the vegetated control soil sample contained the fastest microbial turnover rate and least amount of environmental stress. PLFA results provide evidence that sulfate reducing bacteria (SRB) are active in these soils. Microcosm studies with these soils showed CE dechlorinating activity was occurring. This study demonstrates microbial adaptation to environmental contamination and supports the application of natural soil rhizosphere activity as a remedial strategy.« less

Species and Media Effects on Soil Carbon Dynamics in the Landscape

PubMed Central

Marble, S. Christopher; Prior, Stephen A.; Runion, G. Brett; Torbert, H. Allen; Gilliam, Charles H.; Fain, Glenn B.; Sibley, Jeff L.; Knight, Patricia R.

2016-01-01

Three woody shrub species [cleyera (Ternstroemia gymnanthera Thunb. ‘Conthery’), Indian hawthorn (Rhaphiolepis indica L.) and loropetalum (Loropetalum chinensis Oliv.‘Ruby’)] were container-grown for one growing season in 2008 using either pinebark (industry standard), clean chip residual or WholeTree (derived by-products from the forestry industry) as potting substrates and then transplanted into the landscape in 2008. An Automated Carbon Efflux System was used to continually monitor soil CO2 efflux from December 2010 through November 2011 in each species and substrate combination. Changes in soil carbon (C) levels as a result of potting substrate were assessed through soil sampling in 2009 and 2011 and plant biomass was determined at study conclusion. Results showed that soil CO2-C efflux was similar among all species and substrates, with few main effects of species or substrate observed throughout the study. Soil analysis showed that plots with pinebark contained higher levels of soil C in both 2009 and 2011, suggesting that pinebark decomposes slower than clean chip residual or WholeTree and consequently has greater C storage potential than the two alternative substrates. Results showed a net C gain for all species and substrate combinations; however, plants grown in pinebark had greater C sequestration potential. PMID:27140321

Species and Media Effects on Soil Carbon Dynamics in the Landscape

NASA Astrophysics Data System (ADS)

Marble, S. Christopher; Prior, Stephen A.; Runion, G. Brett; Torbert, H. Allen; Gilliam, Charles H.; Fain, Glenn B.; Sibley, Jeff L.; Knight, Patricia R.

2016-05-01

Three woody shrub species [cleyera (Ternstroemia gymnanthera Thunb. ‘Conthery’), Indian hawthorn (Rhaphiolepis indica L.) and loropetalum (Loropetalum chinensis Oliv.‘Ruby’)] were container-grown for one growing season in 2008 using either pinebark (industry standard), clean chip residual or WholeTree (derived by-products from the forestry industry) as potting substrates and then transplanted into the landscape in 2008. An Automated Carbon Efflux System was used to continually monitor soil CO2 efflux from December 2010 through November 2011 in each species and substrate combination. Changes in soil carbon (C) levels as a result of potting substrate were assessed through soil sampling in 2009 and 2011 and plant biomass was determined at study conclusion. Results showed that soil CO2-C efflux was similar among all species and substrates, with few main effects of species or substrate observed throughout the study. Soil analysis showed that plots with pinebark contained higher levels of soil C in both 2009 and 2011, suggesting that pinebark decomposes slower than clean chip residual or WholeTree and consequently has greater C storage potential than the two alternative substrates. Results showed a net C gain for all species and substrate combinations; however, plants grown in pinebark had greater C sequestration potential.

Spatial Prediction of Soil Classes by Using Soil Weathering Parameters Derived from vis-NIR Spectroscopy

NASA Astrophysics Data System (ADS)

Ramirez-Lopez, Leonardo; Alexandre Dematte, Jose

2010-05-01

There is consensus in the scientific community about the great need of spatial soil information. Conventional mapping methods are time consuming and involve high costs. Digital soil mapping has emerged as an area in which the soil mapping is optimized by the application of mathematical and statistical approaches, as well as the application of expert knowledge in pedology. In this sense, the objective of the study was to develop a methodology for the spatial prediction of soil classes by using soil spectroscopy methodologies related with fieldwork, spectral data from satellite image and terrain attributes in simultaneous. The studied area is located in São Paulo State, and comprised an area of 473 ha, which was covered by a regular grid (100 x 100 m). In each grid node was collected soil samples at two depths (layers A and B). There were extracted 206 samples from transect sections and submitted to soil analysis (clay, Al2O3, Fe2O3, SiO2 TiO2, and weathering index). The first analog soil class map (ASC-N) contains only soil information regarding from orders to subgroups of the USDA Soil Taxonomy System. The second (ASC-H) map contains some additional information related to some soil attributes like color, ferric levels and base sum. For the elaboration of the digital soil maps the data was divided into three groups: i) Predicted soil attributes of the layer B (related to the soil weathering) which were obtained by using a local soil spectral library; ii) Spectral bands data extracted from a Landsat image; and iii) Terrain parameters. This information was summarized by a principal component analysis (PCA) in each group. Digital soil maps were generated by supervised classification using a maximum likelihood method. The trainee information for this classification was extracted from five toposequences based on the analog soil class maps. The spectral models of weathering soil attributes shown a high predictive performance with low error (R2 0.71 to 0.90). The spatial prediction of these attributes also showed a high performance (validations with R2> 0.78). These models allowed to increase spatial resolution of soil weathering information. On the other hand, the comparison between the analog and digital soil maps showed a global accuracy of 69% for the ASC-N map and 62% in the ASC-H map, with kappa indices of 0.52 and 0.45 respectively.

Characterization of soils from an industrial complex contaminated with elemental mercury

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Carrie L., E-mail: millercl@ornl.gov; Watson, David B.; Lester, Brian P.

2013-08-15

Historical use of liquid elemental mercury (Hg(0){sub l}) at the Y-12 National Security Complex in Oak Ridge, TN, USA, resulted in large deposits of Hg(0){sub l} in the soils. The fate and distribution of the spilled Hg(0) are not well characterized. In this study we evaluated analytical tools for characterizing the speciation of Hg in the contaminated soils and then used the analytical techniques to examine the speciation of Hg in two soil cores collected at the site. These include x-ray fluorescence (XRF), soil Hg(0) headspace analysis, and total Hg determination by acid digestion coupled with cold vapor atomic absorptionmore » (HgT). XRF was not found to be suitable for evaluating Hg concentrations in heterogeneous soils containing low concentration of Hg or Hg(0) because Hg concentrations determined using this method were lower than those determined by HgT analysis and the XRF detection limit is 20 mg/kg. Hg(0){sub g} headspace analysis coupled with HgT measurements yielded good results for examining the presence of Hg(0){sub l} in soils and the speciation of Hg. The two soil cores are highly heterogeneous in both the depth and extent of Hg contamination, with Hg concentrations ranging from 0.05 to 8400 mg/kg. In the first core, Hg(0){sub l} was distributed throughout the 3.2 m depth, whereas the second core, from a location 12 m away, contained Hg(0){sub l} in a 0.3 m zone only. Sequential extractions showed organically associated Hg dominant at depths with low Hg concentration. Soil from the zone of groundwater saturation showed reducing conditions and the Hg is likely present as Hg-sulfide species. At this depth, lateral Hg transport in the groundwater may be a source of Hg detected in the soil at the deeper soil depths. Overall, characterization of soils containing Hg(0){sub l} is difficult because of the heterogeneous distribution of Hg within the soils. This is exacerbated in industrial facilities where fill materials make up much of the soils and historical and continued reworking of the subsurface has remobilized the Hg. -- Highlights: • Presence of Hg(0) and chemical transformations control the Hg speciation in soil. • Redox reactions can result in the mobilization and sequestration of Hg in soils. • Analysis of soils containing Hg(0) is complex due to sample heterogeneity.« less

Application of cattle slurry containing Mycobacterium avium subsp. paratuberculosis (MAP) to grassland soil and its effect on the relationship between MAP and free-living amoeba.

PubMed

Salgado, M; Alfaro, M; Salazar, F; Badilla, X; Troncoso, E; Zambrano, A; González, M; Mitchell, R M; Collins, M T

2015-01-30

Slurry from dairy farms is commonly used to fertilize crops and pastures. This mixture of manure, urine and water can harbor multiple microbial pathogens among which Mycobacterium avium subsp. paratuberculosis (MAP) is a major concern. Persistence of MAP in soil and infection of soil Acanthamoeba was evaluated by culture, real-time IS900 PCR, and by staining of amoeba with acid-fast and vital stains comparing soils irrigated with MAP-spiked or control dairy farm slurry. MAP DNA was detected in soil for the 8 month study duration. MAP was detected by PCR from more soil samples for plots receiving MAP-spiked slurry (n=61/66) than from soils receiving control slurry (n=10/66 samples). Vital stains verified that intracellular MAP in amoeba was viable. More MAP was found in amoeba at the end of the study than immediately after slurry application. There was no relationship between MAP presence in soil and in amoeba over time. Infection of amoeba by MAP provides a protected niche for the persistence and even possibly the replication of MAP in soils. As others have suggested, MAP-infected amoeba may act like a "Trojan horse" providing a means for persistence in soils and potentially a source of infection for grazing animals. Copyright © 2014 Elsevier B.V. All rights reserved.

Lithologic Distribution and Geologic History of the Apollo 17 Site: The Record in Soils and Small Rock Particles from the Highland Massifs

NASA Technical Reports Server (NTRS)

Jolliff, Bradley L.; Rockow, Kaylynn M.; Korotev, Randy L.; Haskin, Larry A.

1996-01-01

Through analysis by instrumental neutron activation (INAA) of 789 individual lithic fragments from the 2 mm-4 mm grain-size fractions of five Apollo 17 soil samples (72443, 72503, 73243, 76283, and 76503) and petrographic examination of a subset, we have determined the diversity and proportions of rock types recorded within soils from the highland massifs. The distribution of rock types at the site, as recorded by lithic fragments in the soils, is an alternative to the distribution inferred from the limited number of large rock samples. The compositions and proportions of 2 mm-4 mm fragments provide a bridge between compositions of less than 1 mm fines and types and proportions of rocks observed in large collected breccias and their clasts. The 2 mm-4 mm fraction of soil from South Massif, represented by an unbiased set of lithic fragments from station-2 samples 72443 and 72503, consists of 71% noritic impact-melt breccia, 7% Incompatible-Trace-Element-(ITE)-poor highland rock types (mainly granulitic breccias), 19% agglutinates and regolith breccias, 1% high-Ti mare basalt, and 2% others (very-low-Ti (VLT) basalt, monzogabbro breccia, and metal). In contrast, the 2 mm - 4 mm fraction of a soil from the North Massif, represented by an unbiased set of lithic fragments from station-6 sample 76503, has a greater proportion of ITE-poor highland rock types and mare-basalt fragments: it consists of 29% ITE-poor highland rock types (mainly granulitic breccias and troctolitic anorthosite), 25% impact-melt breccia, 13% high-Ti mare basalt, 31 % agglutinates and regolith breccias, 1% orange glass and related breccia, and 1% others. Based on a comparison of mass- weighted mean compositions of the lithic fragments with compositions of soil fines from all Apollo 17 highland stations, differences between the station-2 and station-6 samples are representative of differences between available samples from the two massifs. From the distribution of different rock types and their compositions, we conclude the following: (1) North-Massif and South-Massif soil samples differ significantly in types and proportions of ITE-poor highland components and ITE-rich impact-melt-breccia components. These differences reflect crudely layered massifs and known local geology. The greater percentage of impact-melt breccia in the South- Massif light-mantle soil stems from derivation of the light mantle from the top of the massif, which apparently is richer in noritic impact-melt breccia than are lower parts of the massifs. (2) At station 2, the 2 mm-4 mm grain-size fraction is enriched in impact-melt breccias compared to the less than 1 mm fraction, suggesting that the <1 mm fraction within the light mantle has a greater proportion of lithologies such as granulitic breccias which are more prevalent lower in the massifs and which we infer to be older (pre-basin) highland components. (3) Soil from station 6, North Massif, contains magnesian troctolitic anorthosite, which is a component that is rare in station-2 South-Massif,contains magnesian troctolitic in impact-melt breccia interpreted by most investigators to be ejecta from the Serenitatis basin.

Astronaut Alan Bean holds Special Environmental Sample Container

NASA Image and Video Library

1969-11-20

AS12-49-7278 (19-20 Nov. 1969) --- Astronaut Alan L. Bean holds a Special Environmental Sample Container filled with lunar soil collected during the extravehicular activity (EVA) in which astronauts Charles Conrad Jr., commander, and Bean, lunar module pilot, participated. Conrad, who took this picture, is reflected in Bean's helmet visor. Conrad and Bean descended in the Apollo 12 Lunar Module (LM) to explore the lunar surface while astronaut Richard F. Gordon Jr., command module pilot, remained with the Command and Service Modules (CSM) in lunar orbit. Photo credit: NASA

Results of a Study Investigating the Plant Uptake of Explosive Residues From Compost of Explosives-Contaminated Soil Obtained from the Umatilla Army Depot Activity

DTIC Science & Technology

1998-11-01

Avoid contact with samples. Be aware of broken containers, corrosives, irritants, biohazards, flammability, pyrophoricity , reactivity, radioactivity...Revision RO 9/23/97 Page 3 NOj-N by Flow Injection Analysis 6.2.2.2 Low results may be obtained for samples that contain high concentrations of iron ...however, for analytes such as iron that may be found at high concentration, a more appropriate test would be to use a concentration near the upper

[Effects of rice straw returning on the community structure and diversity of nitrogen-fixing gene (nifH) in paddy soil].

PubMed

Zhang, Miao-miao; Liu, Yi; Sheng, Rong; Qin, Hong-ling; Wu, Yan-zheng; Wei, Wen-xue

2013-08-01

Taking a long-term fertilization experiment in Taoyuan Agro-ecosystem Research Station under Chinese Academy of Sciences as the platform, and selecting four treatments (no fertilization, CK; rice straw returning, C; nitrogen, phosphorus and potassium fertilization, NPK; and NPK+C) as the objects, soil samples were collected at the tillering, booting and maturing stages of rice, and the abundance, composition and diversity of nifH-containing bacterial community were measured by real-time quantitative PCR and terminal restriction fragment length polymorphism (T-RFLP), aimed to understand the effects of rice straw returning on the nifH-containing bacterial community in paddy soil. Compared with CK, treatments NPK+C and NPK increased the abundance of nifH-containing microorganisms significantly (except at tillering stage), and NPK+C had the highest abundance of nifH-containing microorganisms. Under the effects of long-term fertilization, the composition of nifH gene community in CK differed obviously from that in the other three treatments. The nifH composition had definite difference between C and NPK, but less difference between NPK and NPK+C. Long-term fertilization did not induce significant changes in nifH diversity. Therefore, long-term rice straw returning not only induced the changes of nifH gene community composition, but also resulted in a significant increase in the abundance of nifH-containing community, and hence, the increase of soil nitrogen fixing capacity.

Effect of Increasing Nitrogen Deposition on Soil Microbial Communities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xiao, Shengmu; Xue, Kai; He, Zhili

2010-05-17

Increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity are three main environmental changes occurring on a global scale. The BioCON (Biodiversity, CO2, and Nitrogen) ecological experiment site at the University of Minnesota's Cedar Creek Ecosystem Science Reserve started in 1997, to better understand how these changes would affect soil systems. To understand how increasing nitrogen deposition affects the microbial community diversity, heterogeneity, and functional structure impact soil microbial communities, 12 samples were collected from the BioCON plots in which nitrogenous fertilizer was added to simulate the effect of increasing nitrogen deposition and 12 samples from without added fertilizer. DNAmore » from the 24 samples was extracted using a freeze-grind protocol, amplified, labeled with a fluorescent dye, and then hybridized to GeoChip, a functional gene array containing probes for genes involved in N, S and C cycling, metal resistance and organic contaminant degradation. Detrended correspondence analysis (DCA) of all genes detected was performed to analyze microbial community patterns. The first two axes accounted for 23.5percent of the total variation. The samples fell into two major groups: fertilized and non-fertilized, suggesting that nitrogenous fertilizer had a significant impact on soil microbial community structure and diversity. The functional gene numbers detected in fertilized samples was less that detected in non-fertilizer samples. Functional genes involving in the N cycling were mainly discussed.« less

Carbon stocks in mangroves, salt marshes, and salt barrens in Tampa Bay, Florida, USA: Vegetative and soil characteristics.

NASA Astrophysics Data System (ADS)

Moyer, R. P.; Radabaugh, K.; Chappel, A. R.; Powell, C.; Bociu, I.; Smoak, J. M.

2017-12-01

When compared to other terrestrial environments, coastal "blue carbon" habitats such as salt marshes and mangrove forests sequester disproportionately large amounts of carbon as standing plant biomass and sedimentary peat deposits. This study quantified total carbon stocks in vegetation and soil of 17 salt marshes, salt barrens, and mangrove forests in Tampa Bay, Florida, USA. The sites included natural, restored, and created wetlands of varying ages and degrees of anthropogenic impacts. The average vegetative carbon stock in mangrove forests was 60.1 ± 2.7 Mg ha-1. Mangrove forests frequently consisted of a few large Avicennia germinans trees with smaller, abundant Rhizophora mangle and/or Laguncularia racemosa trees. The average vegetative carbon stock was 11.8 ± 3.7 Mg ha-1 for salt marshes and 2.0 ± 1.2 Mg ha-1 for salt barrens. Vegetative carbon did not significantly differ between natural and newly created salt marsh habitats, indicating that mature restored wetlands can be included with natural wetlands for the calculation of vegetative carbon in coastal blue carbon assessments. Peat deposits were generally less than 50 cm thick and organic content rapidly decreased with depth in all habitats. Soil in this study was analyzed in 1 cm intervals; the accuracy of subsampling or binning soil into depth intervals of 2-5 cm was also assessed. In most cases, carbon stock values obtained from these larger sampling intervals were not statistically different from values obtained from sampling at 1 cm intervals. In the first 15 cm, soil in mangrove forests contained an average of 15.1% organic carbon by weight, salt marshes contained 6.5%, and salt barrens contained 0.8%. Total carbon stock in mangroves was 187.1±17.3 Mg ha-1, with 68% of that carbon stored in soil. Salt marshes contained an average of 65.2±25.3 Mg ha-1 (82% soil carbon) and salt barrens had carbon stocks of 21.4±7.4 Mg ha-1 (89% soil carbon). These values were much lower than global averages for carbon stocks in mangroves and salt marshes, likely due to Tampa Bay's location near the northern limit of mangrove habitat, recent habitat conversion from salt marshes to mangroves, young age of the restored wetlands, and proximity to intense coastal development. Vulnerability of these blue carbon habitats to climate change and sea-level rise will also be discussed.

Biogeochemical study of termite mounds: a case study from Tummalapalle area of Andhra Pradesh, India.

PubMed

Arveti, Nagaraju; Reginald, S; Kumar, K Sunil; Harinath, V; Sreedhar, Y

2012-04-01

Termite mounds are abundant components of Tummalapalle area of uranium mineralization of Cuddapah District of Andhra Pradesh, India. The systematic research has been carried out on the application of termite mound sampling to mineral exploration in this region. The distribution of chemical elements Cu, Pb, Zn, Ni, Co, Cr, Li, Rb, Sr, Ba, and U were studied both in termite soils and adjacent surface soils. Uranium accumulations were noticed in seven termite mounds ranging from 10 to 36 ppm. A biogeochemical parameter called "Biological Absorption Coefficient" of the termite mounds indicated the termite affected soils contained huge amounts of chemical elements than the adjacent soils.

Mechanical Abrasion as a Low Cost Technique for Contamination-Free Sample Acquisition from a Category IVA Clean Platform

NASA Technical Reports Server (NTRS)

Dolgin, B.; Yarbrough, C.; Carson, J.; Troy, R.

2000-01-01

The proposed Mars Sample Transfer Chain Architecture provides Planetary Protection Officers with clean samples that are required for the eventual release from confinement of the returned Martian samples. At the same time, absolute cleanliness and sterility requirement is not placed of any part of the Lander (including the deep drill), Mars Assent Vehicle (MAV), any part of the Orbiting Sample container (OS), Rover mobility platform, any part of the Minicorer, Robotic arm (including instrument sensors), and most of the caching equipment on the Rover. The removal of the strict requirements in excess of the Category IVa cleanliness (Pathfinder clean) is expected to lead to significant cost savings. The proposed architecture assumes that crosscontamination renders all surfaces in the vicinity of the rover(s) and the lander(s) contaminated. Thus, no accessible surface of Martian rocks and soil is Earth contamination free. As a result of the latter, only subsurface samples (either rock or soil) can be and will be collected for eventual return to Earth. Uncontaminated samples can be collected from a Category IVa clean platform. Both subsurface soil and rock samples can be maintained clean if they are collected by devices that are self-contained and clean and sterile inside only. The top layer of the sample is removed in a manner that does not contaminate the collection tools. Biobarrier (e.g., aluminum foil) covering the moving parts of these devices may be used as the only self removing bio-blanket that is required. The samples never leave the collection tools. The lids are placed on these tools inside the collection device. These single use tools with the lid and the sample inside are brought to Earth in the OS. The lids have to be designed impenetrable to the Earth organisms. The latter is a well established art.

Organic and inorganic nitrogen pools in talus fields and subtalus water, Green Lakes Valley, Colorado front range

USGS Publications Warehouse

Williams, M.W.; Davinroy, T.; Brooks, P.D.

1997-01-01

Organic and inorganic pools of nitrogen (N) were measured in talus fines or 'soils' and subtalus water during the summer of 1995 in the alpine Green Lakes Valley catchment of the Colorado Front Range. Nineteen talus soil samples were divided into four classes: subtalus dry, subtalus wet, surface vegetated and surface bare. The size of the individual talus soil patches ranged from 0.5 to 12.0 m2 in area, with bulk density ranging from 0-98 to 1-71 kg m-3 and soil texture ranging from sandy gravel in the subsurface talus to a loam in the vegetated surface. All samples contained KCl-extractable NH4+ and NO3-, organic N and carbon (C), and 17 of 19 samples contained microbial biomass. The mean subtalus values for KCl-extractable NH4-, of 3.2 mg N kg-1, and NO3-, of 1.0 mg N kg-1, were comparable with developed alpine soils on Niwot Ridge. Average microbial biomass in subtalus soils of 5.4 mg N kg-1 and total N of 1000 mg N kg-1 were about an order of magnitude lower than alpine tundra soils, reflecting the reduced amount of vegetation in talus areas. However, these measurements in surface-vegetated patches of talus were comparable with the well-developed soils on Niwot Ridge. These measurements in talus of microbial biomass, total N and KCl-extractable NH4+ and NO3-, show that there is sufficient biotically conditioned 'soil' within talus fields to influence the solute content of interstitial waters. Mean NO3- concentrations of 20 ??eq 1-1 from 29 samples of subtalus water were significantly higher than the 6-7 ??eq 1-1 in snow, while NH4+ concentrations in subtalus water of 0??7 ??eq 1-1 was significantly lower than in snow at 5??2 ??eq 1-1 (p = 0??001). Nitrate concentrations in subtalus water were significantly (p < 0??0001) correlated with concentrations of geochemica??l weathering products such as Ca2+ (r2 = 0??84) and silica (r2 = 0??49). The correlation of NO3- in subtalus water with geochemical weathering products suggests that NO3- concentrations in subtalus water increased with increased residence time, consistent with a biological source for this subtalus water NO3-. The high NO3- concentrations in subtalus water compared with atmospheric deposition of NO3- suggests that NO3- in talus fields may contribute to NO3- in stream waters of high-elevation catchments. ?? 1997 John Wiley & Sons, Ltd.

BOREAS TGB-1 Soil CH4 and CO2 Profile Data from NSA Tower Sites

NASA Technical Reports Server (NTRS)

Crill, Patrick; Varner, Ruth K.; Hall, Forrest G. (Editor); Conrad, Sara K. (Editor)

2000-01-01

The BOREAS TGB-1 team made numerous measurements of trace gas concentrations and fluxes at various NSA sites. This data set contains methane (CH4) and carbon dioxide (CO2) concentrations in soil profiles from the NSA-OJP, NSA-OBS, NSA-YJP, and NSA-BP sites during the period of 23-May to 20-Sep-1994. The soil gas sampling profiles of CH 4 and CO 2 were completed to quantify controls on CO2 and CH4 fluxes in the boreal forest. The data are provided in tabular ASCII files.

Lead isotope systematics of some Apollo 17 soils and some separated components from 76501

NASA Technical Reports Server (NTRS)

Church, S. E.; Tilton, G. R.

1974-01-01

Isotopic lead data from bulk samples of Apollo 17 soils were analyzed, and they define a chord in a concordia diagram, showing the presence of a component or components containing excess radiogenic lead with Pb-207/Pb-206 equal to about 1.32. The chord is distinctly different from the cataclysm chord, for which Pb-207/Pb-206 is approximately 1.45. Nitric acid analysis of plagioclase indicates lead ages of around 4.35 AE, in agreement with previous findings. Agglutinates from soil 76501,34 show loss of approximately 15% of lead.

Bacterial community composition in Brazilian Anthrosols and adjacent soils characterized using culturing and molecular identification.

PubMed

O'Neill, B; Grossman, J; Tsai, M T; Gomes, J E; Lehmann, J; Peterson, J; Neves, E; Thies, J E

2009-07-01

Microbial community composition was examined in two soil types, Anthrosols and adjacent soils, sampled from three locations in the Brazilian Amazon. The Anthrosols, also known as Amazonian dark earths, are highly fertile soils that are a legacy of pre-Columbian settlement. Both Anthrosols and adjacent soils are derived from the same parent material and subject to the same environmental conditions, including rainfall and temperature; however, the Anthrosols contain high levels of charcoal-like black carbon from which they derive their dark color. The Anthrosols typically have higher cation exchange capacity, higher pH, and higher phosphorus and calcium contents. We used culture media prepared from soil extracts to isolate bacteria unique to the two soil types and then sequenced their 16S rRNA genes to determine their phylogenetic placement. Higher numbers of culturable bacteria, by over two orders of magnitude at the deepest sampling depths, were counted in the Anthrosols. Sequences of bacteria isolated on soil extract media yielded five possible new bacterial families. Also, a higher number of families in the bacteria were represented by isolates from the deeper soil depths in the Anthrosols. Higher bacterial populations and a greater diversity of isolates were found in all of the Anthrosols, to a depth of up to 1 m, compared to adjacent soils located within 50-500 m of their associated Anthrosols. Compared to standard culture media, soil extract media revealed diverse soil microbial populations adapted to the unique biochemistry and physiological ecology of these Anthrosols.

DRY–WET CYCLES INCREASE PESTICIDE RESIDUE RELEASE FROM SOIL

PubMed Central

Jablonowski, Nicolai David; Linden, Andreas; Köppchen, Stephan; Thiele, Björn; Hofmann, Diana; Burauel, Peter

2012-01-01

Soil drying and rewetting may alter the release and availability of aged pesticide residues in soils. A laboratory experiment was conducted to evaluate the influence of soil drying and wetting on the release of pesticide residues. Soil containing environmentally long-term aged (9–17 years) 14C-labeled residues of the herbicides ethidimuron (ETD) and methabenzthiazuron (MBT) and the fungicide anilazine (ANI) showed a significantly higher release of 14C activity in water extracts of previously dried soil compared to constantly moistened soil throughout all samples (ETD: p < 0.1, MBT and ANI: p < 0.01). The extracted 14C activity accounted for 44% (ETD), 15% (MBT), and 20% (ANI) of total residual 14C activity in the samples after 20 successive dry–wet cycles, in contrast to 15% (ETD), 5% (MBT), and 6% (ANI) in extracts of constantly moistened soils. In the dry–wet soils, the dissolved organic carbon (DOC) content correlated with the measured 14C activity in the aqueous liquids and indicated a potential association of DOC with the pesticide molecules. Liquid chromatography MS/MS analyses of the water extracts of dry–wet soils revealed ETD and MBT in detectable amounts, accounting for 1.83 and 0.01%, respectively, of total applied water-extractable parent compound per soil layer. These findings demonstrate a potential remobilization of environmentally aged pesticide residue fractions from soils due to abiotic stresses such as wet–dry cycles. Environ. Toxicol. Chem. 2012; 31: 1941–1947. © 2012 SETAC PMID:22782855

Carbon Storage in Soil Size Fractions Under Two Cacao Agroforestry Systems in Bahia, Brazil

NASA Astrophysics Data System (ADS)

Gama-Rodrigues, Emanuela F.; Ramachandran Nair, P. K.; Nair, Vimala D.; Gama-Rodrigues, Antonio C.; Baligar, Virupax C.; Machado, Regina C. R.

2010-02-01

Shaded perennial agroforestry systems contain relatively high quantities of soil carbon (C) resulting from continuous deposition of plant residues; however, the extent to which the C is sequestered in soil will depend on the extent of physical protection of soil organic C (SOC). The main objective of this study was to characterize SOC storage in relation to soil fraction-size classes in cacao ( Theobroma cacao L.) agroforestry systems (AFSs). Two shaded cacao systems and an adjacent natural forest in reddish-yellow Oxisols in Bahia, Brazil were selected. Soil samples were collected from four depth classes to 1 m depth and separated by wet-sieving into three fraction-size classes (>250 μm, 250-53 μm, and <53 μm)—corresponding to macroaggregate, microaggregate, and silt-and-clay size fractions—and analyzed for C content. The total SOC stock did not vary among systems (mean: 302 Mg/ha). On average, 72% of SOC was in macroaggregate-size, 20% in microaggregate-size, and 8% in silt-and-clay size fractions in soil. Sonication of aggregates showed that occlusion of C in soil aggregates could be a major mechanism of C protection in these soils. Considering the low level of soil disturbances in cacao AFSs, the C contained in the macroaggregate fraction might become stabilized in the soil. The study shows the role of cacao AFSs in mitigating greenhouse gas (GHG) emission through accumulation and retention of high amounts of organic C in the soils and suggests the potential benefit of this environmental service to the nearly 6 million cacao farmers worldwide.

Carbon storage in soil size fractions under two cacao agroforestry systems in Bahia, Brazil.

PubMed

Gama-Rodrigues, Emanuela F; Ramachandran Nair, P K; Nair, Vimala D; Gama-Rodrigues, Antonio C; Baligar, Virupax C; Machado, Regina C R

2010-02-01

Shaded perennial agroforestry systems contain relatively high quantities of soil carbon (C) resulting from continuous deposition of plant residues; however, the extent to which the C is sequestered in soil will depend on the extent of physical protection of soil organic C (SOC). The main objective of this study was to characterize SOC storage in relation to soil fraction-size classes in cacao (Theobroma cacao L.) agroforestry systems (AFSs). Two shaded cacao systems and an adjacent natural forest in reddish-yellow Oxisols in Bahia, Brazil were selected. Soil samples were collected from four depth classes to 1 m depth and separated by wet-sieving into three fraction-size classes (>250 microm, 250-53 microm, and <53 microm)-corresponding to macroaggregate, microaggregate, and silt-and-clay size fractions-and analyzed for C content. The total SOC stock did not vary among systems (mean: 302 Mg/ha). On average, 72% of SOC was in macroaggregate-size, 20% in microaggregate-size, and 8% in silt-and-clay size fractions in soil. Sonication of aggregates showed that occlusion of C in soil aggregates could be a major mechanism of C protection in these soils. Considering the low level of soil disturbances in cacao AFSs, the C contained in the macroaggregate fraction might become stabilized in the soil. The study shows the role of cacao AFSs in mitigating greenhouse gas (GHG) emission through accumulation and retention of high amounts of organic C in the soils and suggests the potential benefit of this environmental service to the nearly 6 million cacao farmers worldwide.

Experiments with a small behaviour controlled planetary rover

NASA Technical Reports Server (NTRS)

Miller, David P.; Desai, Rajiv S.; Gat, Erann; Ivlev, Robert; Loch, John

1993-01-01

A series of experiments that were performed on the Rocky 3 robot is described. Rocky 3 is a small autonomous rover capable of navigating through rough outdoor terrain to a predesignated area, searching that area for soft soil, acquiring a soil sample, and depositing the sample in a container at its home base. The robot is programmed according to a reactive behavior control paradigm using the ALFA programming language. This style of programming produces robust autonomous performance while requiring significantly less computational resources than more traditional mobile robot control systems. The code for Rocky 3 runs on an eight bit processor and uses about ten k of memory.

Uncertainty in accounting for carbon accumulation following forest harvesting

NASA Astrophysics Data System (ADS)

Lilly, P.; Yanai, R. D.; Arthur, M. A.; Bae, K.; Hamburg, S.; Levine, C. R.; Vadeboncoeur, M. A.

2014-12-01

Tree biomass and forest soils are both difficult to quantify with confidence, for different reasons. Forest biomass is estimated non-destructively using allometric equations, often from other sites; these equations are difficult to validate. Forest soils are destructively sampled, resulting in little measurement error at a point, but with large sampling error in heterogeneous soil environments, such as in soils developed on glacial till. In this study, we report C contents of biomass and soil pools in northern hardwood stands in replicate plots within replicate stands in 3 age classes following clearcut harvesting (14-19 yr, 26-29 yr, and > 100 yr) at the Bartlett Experimental Forest, USA. The rate of C accumulation in aboveground biomass was ~3 Mg/ha/yr between the young and mid-aged stands and <1 Mg/ha/yr between the mid-aged and mature stands. We propagated model uncertainty through allometric equations, and found errors ranging from 3-7%, depending on the stand. The variation in biomass among plots within stands (6-19%) was always larger than the allometric uncertainties. Soils were described by quantitative soil pits in three plots per stand, excavated by depth increment to the C horizon. Variation in soil mass among pits within stands averaged 28% (coefficient of variation); variation among stands within an age class ranged from 9-25%. Variation in carbon concentrations averaged 27%, mainly because the depth increments contained varying proportions of genetic horizons, in the upper part of the soil profile. Differences across age classes in soil C were not significant, because of the high variability. Uncertainty analysis can help direct the design of monitoring schemes to achieve the greatest confidence in C stores per unit of sampling effort. In the system we studied, more extensive sampling would be the best approach to reducing uncertainty, as natural spatial variation was higher than model or measurement uncertainties.

High-throughput NIR spectroscopic (NIRS) detection of microplastics in soil.

PubMed

Paul, Andrea; Wander, Lukas; Becker, Roland; Goedecke, Caroline; Braun, Ulrike

2018-05-12

The increasing pollution of terrestrial and aquatic ecosystems with plastic debris leads to the accumulation of microscopic plastic particles of still unknown amount. To monitor the degree of contamination, analytical methods are urgently needed, which help to quantify microplastics (MP). Currently, time-costly purified materials enriched on filters are investigated both by micro-infrared spectroscopy and/or micro-Raman. Although yielding precise results, these techniques are time consuming, and are restricted to the analysis of a small part of the sample in the order of few micrograms. To overcome these problems, we tested a macroscopic dimensioned near-infrared (NIR) process-spectroscopic method in combination with chemometrics. For calibration, artificial MP/ soil mixtures containing defined ratios of polyethylene, polyethylene terephthalate, polypropylene, and polystyrene with diameters < 125 μm were prepared and measured by a process FT-NIR spectrometer equipped with a fiber-optic reflection probe. The resulting spectra were processed by chemometric models including support vector machine regression (SVR), and partial least squares discriminant analysis (PLS-DA). Validation of models by MP mixtures, MP-free soils, and real-world samples, e.g., fermenter residue, suggests a reliable detection and a possible classification of MP at levels above 0.5 to 1.0 mass% depending on the polymer. The benefit of the combined NIRS chemometric approach lies in the rapid assessment whether soil contains MP, without any chemical pretreatment. The method can be used with larger sample volumes and even allows for an online prediction and thus meets the demand of a high-throughput method.

PAH sorption mechanism and partitioning behavior in lampblack-impacted soils from former oil-gas plant sites.

PubMed

Hong, Lei; Ghosh, Upal; Mahajan, Tania; Zare, Richard N; Luthy, Richard G

2003-08-15

This study assessed polycyclic aromatic hydrocarbon (PAH) association and aqueous partitioning in lampblack-impacted field soils from five sites in California that formerly housed oil-gas process operations. Lampblack is the solid residue resulting from the decomposition of crude oil at high temperatures in the gas-making operation and is coated or impregnated with oil gasification byproducts, among which PAHs are the compounds of the greatest regulatory concern. A suite of complementary measurements investigated the character of lampblack particles and PAH location and the associated effects on PAH partitioning between lampblack and water. PAH analyses on both whole samples and density-separated components demonstrated that 81-100% of PAHs in the lampblack-impacted soils was associated with lampblack particles. FTIR, 13C NMR, and SEM analyses showed that oil-gas lampblack solids comprise primarily aromatic carbon with soot-like structures. A free-phase aromatic oil may be present in some of the lampblack soils containing high PAH concentrations. Comparable long-term aqueous partitioning measurements were obtained with an air-bridge technique and with a centrifugation/alum flocculation procedure. Large solid/water partition coefficient (Kd) values were observed in samples exhibiting lower PAH and oil levels, whereas smaller Kd values were measured in lampblack samples containing high PAH levels. The former result is in agreement with an oil-soot partitioning model, and the latter is in agreement with a coal tar-water partitioning model. Lampblack containing high PAH levels appears to exhaust the sorption capacity of the soot-carbon, creating a free aromatic oil phase that exhibits partitioning behavior similar to PAHs in coal tar. This study improves mechanistic understanding of PAH sorption on aged lampblack residuals at former oil-gas sites and provides a framework for mechanistic assessment of PAH leaching potential and risk from such site materials.

Survival of rhizobia in two soils as influenced by storage conditions.

PubMed

Martyniuk, Stefan; Oroń, Jadwiga

2008-01-01

Two soils were kept moist at 4 degrees C, -20 degrees C or air-dried at 20-22 degrees C and after one week, one month, two months and six months of storage at these conditions changes in soil populations of Rhizobium leguminosarum bv. trifolii (Rlt) and Rhizobium leguminosarum bv. viciae (Rlv) were examined. In one air-dried soil (from Grab6w) markedly lower numbers of both Rlt and Rlv., as compared to the refrigerated or frozen samples, were found already after 1 week of storage. In the case of the second soil (from Osiny) air-drying significantly reduced numbers of the rhizobia after 2 and 6 months of storage. The soil from Osiny contained higher amounts of C org, total N and clay than the Grabów soil. Both soils stored moist in a refrigerator (4 degrees C) or frozen (-20 degrees C) retained similar populations of the examined rhizobia throughout the entire storage period, indicating that soil freezing is not detrimental for the examined rhizobia.

Estimating the Pollution Risk of Cadmium in Soil Using a Composite Soil Environmental Quality Standard

PubMed Central

Huang, Biao; Zhao, Yongcun

2014-01-01

Estimating standard-exceeding probabilities of toxic metals in soil is crucial for environmental evaluation. Because soil pH and land use types have strong effects on the bioavailability of trace metals in soil, they were taken into account by some environmental protection agencies in making composite soil environmental quality standards (SEQSs) that contain multiple metal thresholds under different pH and land use conditions. This study proposed a method for estimating the standard-exceeding probability map of soil cadmium using a composite SEQS. The spatial variability and uncertainty of soil pH and site-specific land use type were incorporated through simulated realizations by sequential Gaussian simulation. A case study was conducted using a sample data set from a 150 km2 area in Wuhan City and the composite SEQS for cadmium, recently set by the State Environmental Protection Administration of China. The method may be useful for evaluating the pollution risks of trace metals in soil with composite SEQSs. PMID:24672364

Movement of Endotoxin Through Soil Columns

PubMed Central

Goyal, Sagar M.; Gerba, Charles P.; Lance, J. Clarence

1980-01-01

Land treatment of wastewater is an attractive alternative to conventional sewage treatment systems and is gaining widespread acceptance. Although land application systems prevent surface water pollution and augment the available water supplies, the potential dangers to human health should be evaluated. Since sewage may contain high amounts of bacterial endotoxin, the removal of endotoxin from sewage by percolation through soil was investigated. It was found that 90 to 99% of the endotoxin was removed after travel of sewage through 100 to 250 cm of loamy sand soil. When distilled water was allowed to infiltrate into the soil to simulate rainfall, the endotoxin was mobilized and moved in a concentrated band through the soil column. On testing samples from actual land treatment sites, as much as 480 ng of endotoxin per milliliter was found in some groundwater samples. The presence of endotoxin in potable water is known to be a potential problem under some circumstances, but the importance of endotoxin in water supplies has not been fully assessed. Therefore, the design, operation, and management of land application systems should take into account the fate of endotoxin in groundwater beneath the sites. PMID:7387154

Persistence of culturable Escherichia coli fecal contaminants in dairy alpine grassland soils.

PubMed

Texier, Stéphanie; Prigent-Combaret, Claire; Gourdon, Marie Hélène; Poirier, Marie Andrée; Faivre, Pierre; Dorioz, Jean Marcel; Poulenard, Jérome; Jocteur-Monrozier, Lucile; Moënne-Loccoz, Yvan; Trevisan, Dominique

2008-01-01

Our knowledge of Escherichia coli (E. coli) ecology in the field is very limited in the case of dairy alpine grassland soils. Here, our objective was to monitor field survival of E. coli in cow pats and underlying soils in four different alpine pasture units, and to determine whether the soil could constitute an environmental reservoir. E. coli was enumerated by MPN using a selective medium. E. coli survived well in cow pats (10(7) to 10(8) cells g(-1) dry pat), but cow pats disappeared within about 2 mo. In each pasture unit, constant levels of E. coli (10(3) to 10(4) cells g(-1) dry soil) were recovered from all topsoil (0-5 cm) samples regardless of the sampling date, that is, under the snow cover, immediately after snow melting, or during the pasture season (during and after the decomposition of pats). In deeper soil layers below the root zone (5-25 cm), E. coli persistence varied according to soil type, with higher numbers recovered in poorly-drained soils (10(3) to 10(4) cells g(-1) dry soil) than in well-drained soils (< 10(2) cells g(-1) dry soil). A preliminary analysis of 38 partial uidA sequences of E. coli from pat and soils highlighted a cluster containing sequences only found in this work. Overall, this study raises the possibility that fecal E. coli could have formed a naturalized (sub)population, which is now part of the indigenous soil community of alpine pasture grasslands, the soil thus representing an environmental reservoir of E. coli.

Microbial removal of toxic metals from a heavily polluted soil

NASA Astrophysics Data System (ADS)

Nicolova, Marina; Spasova, Irena; Georgiev, Plamen; Groudev, Stoyan

2015-04-01

Samples of a leached cinnamonic forest soil heavily polluted with uranium and some toxic heavy metals (mainly copper, zinc and cadmium) were subjected to cleaning by means of bioleaching with acidophilic chemolithotrophic bacteria. The treatment was carried out in a green house in which several plots containing 150 kg of soil each were constructed. The effect of some essential environmental factors such as pH, humidity, temperature and contents of nutrients on the cleaning process was studied. It was found that under optimal conditions the content of pollutants were decreased below the relevant permissible levels within a period of 170 days. The soil cleaned in this way was characterized by a much higher production of biomass of different plants (alfalfa, clover, red fescue, vetch) than the untreated polluted soil.

Field-based Evaluation of a Novel SPME-GC-MS Method for Investigation of Below-ground Interaction between Brassica Roots and Larvae of Cabbage Root Fly, Delia radicum L.

PubMed

Deasy, William; Shepherd, Tom; Alexander, Colin J; Birch, A Nicholas E; Evans, K Andrew

2016-11-01

Collection of volatiles from plant roots poses technical challenges due to difficulties accessing the soil environment without damaging the roots. To validate a new non-invasive method for passive sampling of root volatiles in situ, from plants grown under field conditions, using solid phase micro-extraction (SPME). SPME fibres were inserted into perforated polytetrafluoroethene (PTFE) tubes positioned in the soil next to broccoli plants for collection of root volatiles pre- and post-infestation with Delia radicum larvae. After sample analysis by gas chromatography-mass spectrometry (GC-MS), principal component analysis (PCA) was applied to determine differences in the profiles of volatiles between samples. GC-MS analysis revealed that this method can detect temporal changes in root volatiles emitted before and after Delia radicum damage. PCA showed that samples collected pre- and post-infestation were compositionally different due to the presence of root volatiles induced by D. radicum feeding. Sulphur containing compounds, in particular, accounted for the differences observed. Root volatiles emission patterns post-infestation are thought to follow the feeding and developmental progress of larvae. This study shows that volatiles released by broccoli roots can be collected in situ using SPME fibres within perforated PTFE tubes under field conditions. Plants damaged by Delia radicum larvae could be distinguished from plants sampled pre-infestation and soil controls on the basis of larval feeding-induced sulphur-containing volatiles. These results show that this new method is a powerful tool for non-invasive sampling of root volatiles below-ground. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Comprehensive multiphase NMR spectroscopy: Basic experimental approaches to differentiate phases in heterogeneous samples

NASA Astrophysics Data System (ADS)

Courtier-Murias, Denis; Farooq, Hashim; Masoom, Hussain; Botana, Adolfo; Soong, Ronald; Longstaffe, James G.; Simpson, Myrna J.; Maas, Werner E.; Fey, Michael; Andrew, Brian; Struppe, Jochem; Hutchins, Howard; Krishnamurthy, Sridevi; Kumar, Rajeev; Monette, Martine; Stronks, Henry J.; Hume, Alan; Simpson, André J.

2012-04-01

Heterogeneous samples, such as soils, sediments, plants, tissues, foods and organisms, often contain liquid-, gel- and solid-like phases and it is the synergism between these phases that determine their environmental and biological properties. Studying each phase separately can perturb the sample, removing important structural information such as chemical interactions at the gel-solid interface, kinetics across boundaries and conformation in the natural state. In order to overcome these limitations a Comprehensive Multiphase-Nuclear Magnetic Resonance (CMP-NMR) probe has been developed, and is introduced here, that permits all bonds in all phases to be studied and differentiated in whole unaltered natural samples. The CMP-NMR probe is built with high power circuitry, Magic Angle Spinning (MAS), is fitted with a lock channel, pulse field gradients, and is fully susceptibility matched. Consequently, this novel NMR probe has to cover all HR-MAS aspects without compromising power handling to permit the full range of solution-, gel- and solid-state experiments available today. Using this technology, both structures and interactions can be studied independently in each phase as well as transfer/interactions between phases within a heterogeneous sample. This paper outlines some basic experimental approaches using a model heterogeneous multiphase sample containing liquid-, gel- and solid-like components in water, yielding separate 1H and 13C spectra for the different phases. In addition, 19F performance is also addressed. To illustrate the capability of 19F NMR soil samples, containing two different contaminants, are used, demonstrating a preliminary, but real-world application of this technology. This novel NMR approach possesses a great potential for the in situ study of natural samples in their native state.

Comprehensive multiphase NMR spectroscopy: basic experimental approaches to differentiate phases in heterogeneous samples.

PubMed

Courtier-Murias, Denis; Farooq, Hashim; Masoom, Hussain; Botana, Adolfo; Soong, Ronald; Longstaffe, James G; Simpson, Myrna J; Maas, Werner E; Fey, Michael; Andrew, Brian; Struppe, Jochem; Hutchins, Howard; Krishnamurthy, Sridevi; Kumar, Rajeev; Monette, Martine; Stronks, Henry J; Hume, Alan; Simpson, André J

2012-04-01

Heterogeneous samples, such as soils, sediments, plants, tissues, foods and organisms, often contain liquid-, gel- and solid-like phases and it is the synergism between these phases that determine their environmental and biological properties. Studying each phase separately can perturb the sample, removing important structural information such as chemical interactions at the gel-solid interface, kinetics across boundaries and conformation in the natural state. In order to overcome these limitations a Comprehensive Multiphase-Nuclear Magnetic Resonance (CMP-NMR) probe has been developed, and is introduced here, that permits all bonds in all phases to be studied and differentiated in whole unaltered natural samples. The CMP-NMR probe is built with high power circuitry, Magic Angle Spinning (MAS), is fitted with a lock channel, pulse field gradients, and is fully susceptibility matched. Consequently, this novel NMR probe has to cover all HR-MAS aspects without compromising power handling to permit the full range of solution-, gel- and solid-state experiments available today. Using this technology, both structures and interactions can be studied independently in each phase as well as transfer/interactions between phases within a heterogeneous sample. This paper outlines some basic experimental approaches using a model heterogeneous multiphase sample containing liquid-, gel- and solid-like components in water, yielding separate (1)H and (13)C spectra for the different phases. In addition, (19)F performance is also addressed. To illustrate the capability of (19)F NMR soil samples, containing two different contaminants, are used, demonstrating a preliminary, but real-world application of this technology. This novel NMR approach possesses a great potential for the in situ study of natural samples in their native state. Copyright © 2012 Elsevier Inc. All rights reserved.

Percolation behavior of tritiated water into a soil packed bed

DOE Office of Scientific and Technical Information (OSTI.GOV)

Honda, T.; Katayama, K.; Uehara, K.

2015-03-15

A large amount of cooling water is used in a D-T fusion reactor. The cooling water will contain tritium with high concentration because tritium can permeate metal walls at high temperature easily. A development of tritium handling technology for confining tritiated water in the fusion facility is an important issue. In addition, it is also important to understand tritium behavior in environment assuming severe accidents. In this study, percolation experiments of tritiated water in soil packed bed were carried out and tritium behavior in soil was discussed. Six soil samples were collected in Hakozaki campus of Kyushu University. These particlemore » densities were of the same degree as that of general soils and moisture contents were related to BET surface area. For two soil samples used in the percolation experiment of tritiated water, saturated hydraulic conductivity agreed well with the estimating value by Creager. Tritium retention ratio in the soil packed bed was larger than water retention. This is considered to be due to an effect of tritium sorption on the surface of soil particles. The isotope exchange capacity estimated by assuming that H/T ratio of supplied tritiated water and H/T ratio of surface water of soil particle was equal was comparable to that on cement paste and mortar which were obtained by exposure of tritiated water vapor. (authors)« less

The mobilization of aluminum in a natural soil system: Effects of hydrologic pathways

USGS Publications Warehouse

Cozzarelli, Isabelle M.; Herman, Janet S.; Parnell, Roderic A.

1987-01-01

A two-component soil water flow model was used in conjunction with an equilibrium speciation model WATEQF to study aluminum mobility in soils of a forested watershed, White Oak Run, in the Shenandoah National Park, Virginia. Soil solution samples, taken from the O, E, B, C1, and C2horizons, were collected from zero-tension lysimeters designed to collect faster gravitational macropore flow and tension lysimeters designed to collect slower capillary micropore flow. Dissolved aluminum was fractionated into acid-soluble, inorganic monomeric, and organic monomeric aluminum. Soil water aluminum concentrations decreased with depth indicating that the deep soil is a sink for aluminum. All waters contained significant concentrations of acid-soluble aluminum and exhibited a negative correlation between pH and the inorganic monomeric aluminum concentrations. Water in the shallow soil showed distinctly different chemical compositions for the two flow types, while C horizon micropore and macropore waters were more similar. Because of its shorter residence time, water flowing in deep soil macropores underwent less extensive neutralization and immobilization of aqueous aluminum than micropore water. The O horizon macropore waters were undersaturated for all hydroxide, silicate, and sulfate mineral phases considered. The C horizon samples from both flow types were near equilibrium with respect to kaolinite and synthetic gibbsite, indicating that mineral solubility controls water chemistry in the deep soil, while organic substances are the key control in the shallow macropore waters.

Carbon Storage in US Wetlands. | Science Inventory | US EPA

EPA Pesticide Factsheets

Background/Question/Methods Wetland soils contain some of the highest stores of soil carbon in the biosphere. However, there is little understanding of the quantity and distribution of carbon stored in US wetlands or of the potential effects of human disturbance on these stocks. We provide unbiased estimates of soil carbon stocks for wetlands at regional and national scales and describe how soil carbon stocks vary by anthropogenic disturbance to the wetland. To estimate the quantity and distribution of carbon stocks in wetlands of the conterminous US, we used data gathered in the field as part of the 2011 National Wetland Condition Assessment (NWCA) conducted by USEPA. During the growing season, field crews collected soil samples by horizon from 120-cm deep soil pits at 967 randomly selected wetland sites. Soil samples were analyzed for bulk density and organic carbon. We applied site carbon stock averages by soil depth back to the national population of wetlands and to several subpopulations, including five geographic areas and anthropogenic disturbance level. Disturbance levels were categorized by the NWCA as least, intermediately, or most disturbed using a priori defined physical, chemical, and biological indicators that were observable at the time of the site visit.Results/Conclusions We find that wetlands in the conterminous US store a total of 11.52 PgC – roughly equivalent to four years of annual carbon emissions by the US, with the greatest soil ca

A Sabbatical Journey into the Microbial World.

ERIC Educational Resources Information Center

Lundgren, Linda

1991-01-01

Presents research results on photosynthetic, carbon monoxide utilizing bacteria. Discusses applications of the research and offers three sets of experimental procedures and data that students analyze to determine which bacterium from a soil sample uses carbon monoxide fastest. (Contains 21 references.) (MDH)

Biological Responses in Rats Exposed to Cigarette Smoke and Middle East Sand (Dust)

DTIC Science & Technology

2012-01-01

surface dust (upper 10 mm of soil) was collected in an area no larger than 15.24 m × 15.24 m, and sampling was confined to local soil containing no fill...2004). Airway histopathology One day after the last sand exposure, necropsy was performed. Rats were anesthetized with sodium Iraqi sand toxicity 113...olfactory epithelial necrosis . During the light microscope examination, histopatho- logic diagnoses for tissues of each animal were recorded

Thermomagnetic properties of peat-soil layers from Sag pond near Lembang Fault, West Java, Indonesia

NASA Astrophysics Data System (ADS)

Iryanti, Mimin; Wibowo, Dimas Maulana; Bijaksana, Satria

2015-09-01

Sag pond is a body of water near fault system as water flows blocked by the fault. Sag pond is a special type of environment for peat formation as peat layers in were deposited as the fault moves in episodic fashion. Depending on the history of the fault, peat layers are often interrupted by soil layers. In this study, core of peat-soil layers from a Sag pond in Karyawangi Village near Lembang Fault was obtained and analyzed for its magnetic properties. The 5 m core was obtained using a hand auger. Individual samples were obtained every cm and measured for their magnetic susceptibility. In general, there are three distinct magnetic susceptibility layers that were associated with peat and soil layers. The upper first 1 m is unconsolidated mud layer with its relatively high magnetic susceptibility. Between 1-2.81 m, there is consolidated mud layer and the lowest part (2.82-5) m is basically peat layer. Six samples were then measured for their thermomagnetic properties by measuring their susceptibility during heating and cooling from room temperature to 700°C. The thermomagnetic profiles provide Curie temperatures for various magnetic minerals in the cores. It was found that the upper part (unconsolidated mud) contains predominantly iron-oxides, such as magnetite while the lowest part (peat layer) contains significant amount of iron-sulphides, presumably greigite.

Source identification of petroleum hydrocarbons in soil and sediments from Iguaçu River Watershed, Paraná, Brazil using the CHEMSIC method (CHEMometric analysis of Selected Ion Chromatograms).

PubMed

Gallotta, Fabiana D C; Christensen, Jan H

2012-04-27

A chemometric method based on principal component analysis (PCA) of pre-processed and combined sections of selected ion chromatograms (SICs) is used to characterise the hydrocarbon profiles in soil and sediment from Araucária, Guajuvira, General Lúcio and Balsa Nova Municipalities (Iguaçu River Watershed, Paraná, Brazil) and to indicate the main sources of hydrocarbon pollution. The study includes 38 SICs of polycyclic aromatic compounds (PACs) and four of petroleum biomarkers in two separate analyses. The most contaminated samples are inside the Presidente Getúlio Vargas Refinery area. These samples represent a petrogenic pattern and different weathering degrees. Samples from outside the refinery area are either less or not contaminated, or contain mixtures of diagenetic, pyrogenic and petrogenic inputs where different proportions predominate. The locations farthest away from industrial activity (Balsa Nova) contains the lowest levels of PAC contamination. There are no evidences to conclude positive matches between the samples from outside the refinery area and the Cusiana spilled oil. Copyright © 2012 Elsevier B.V. All rights reserved.

DDT, DDD, and DDE in soil of Xiangfen County, China: Residues, sources, spatial distribution, and health risks.

PubMed

Ma, Jin; Pan, Li-Bo; Yang, Xiao-Yang; Liu, Xiao-Ling; Tao, Shi-Yang; Zhao, Long; Qin, Xiao-Peng; Sun, Zai-Jin; Hou, Hong; Zhou, Yong-Zhang

2016-11-01

We collected and analyzed 128 surface soil samples from Xiangfen County for dichlorodiphenyltrichloroethane (DDT), dichlorodiphenyldichloroethane (DDD), and dichlorodiphenyldichloroethylene (DDE). Total DDT concentrations (DDTs; sum of p,p'-DDD, p,p'-DDE, and p,p'-DDT) ranged from ND to 427.81 ng g(-1) (dry weight, dw), with a mean of 40.26 ng g(-1) (dw). Among the three compounds, p,p'-DDD was the most dominant. The DDTs in Xiangfen County soils mainly originated from historical DDT use, but there were also new inputs likely related to dicofol use. The DDTs in Xiangfen County soils were mainly degraded under anaerobic conditions, and direct degradation to DDD was the main degradation route. Regions with relatively high concentrations of DDTs were mainly located in North and South Xiangfen County. In these regions, many soil samples contained p,p'-DDT as the predominant pollutant, suggestive of extensive new inputs of DDT. A health risk assessment revealed that there are no serious long-term health impacts of exposure to DDTs in soil, for adults or children. Copyright © 2016 Elsevier Ltd. All rights reserved.

Dynamics of Cd, Cu and Pb added to soil through different kinds of sewage sludge.

PubMed

Torri, S I; Lavado, R S

2008-01-01

A greenhouse experiment was set up to study the distribution of Cd, Cu and Pb in three typical soils of the Pampas Region amended with sewage sludge. A sequential extraction procedure was used to obtain four operationally defined geochemical species: exchangeable, bound to organic matter, bound to carbonates, and residual. Two kinds of sewage sludge were used: pure sewage sludge and sewage sludge containing 30% DM of its own incinerated ash, at rates equivalent to a field application of 150 t DM ha(-1). Pots were maintained at 80% of field capacity through daily irrigation with distilled water. Soil samples were obtained on days 1, 60, 270 and 360, and then air-dried and passed through a 2 mm sieve for analysis. Results showed that sludge application increased the less available forms of Cd, Cu and Pb. The inorganic forms became the most prevalent forms for Cu and Pb, whereas Cd was only found in the residual fraction. The concentrations of OM-Cu and INOR-Cu in the amended soil samples were closely correlated with soil pH, whereas the chemical behavior of Cd and Pb did not depend on soil physico-chemical characteristics.

Distribution and risk factors of Ascarididae and other geohelminths in the soil of Uberlandia, Minas Gerais, Brazil

PubMed Central

Mota, Kelem Cristina Pereira; Grama, Daliane Faria; Fava, Natália M. Nasser; Úngari, Letícia Pereira; Faria, Elaine Silva Marques; Cury, Márcia Cristina

2018-01-01

ABSTRACT Among the geohelminths, parasites from the Ascarididae family have a significant role in the human and animal health. This research aims to determine the prevalence of Ascarididae species in the soil in different areas located in a city of Minas Gerais State, Brazil (South America). The study was developed in squares, parks, sports clubs, orchards and municipal children's schools. Samples of sand/soil/grass were collected from January to August 2014. The optical microscope screening was performed through formal-ether and spontaneous sedimentation techniques. Out of the 183 collected samples, eight (4.4%) belonged to parks, 16 (8.7%) to sports clubs, 76 (41.5%) to squares, 23 (12.6%) to orchards, and 60 (32.8%) to schools. Out of the total, 28 (15.3%) contained Ascarididae eggs. Higher levels of positivity were demonstrated in the raining season (25.0%), in samples collected in the southern region of the town (25.1%), on ground soils (27.3%). Twenty-three (12.6%) were detected by the formal-ether sedimentation technique and 10 (5.5%) by spontaneous sedimentation technique. Therefore, it was concluded that the soils in the city of Uberlandia are contaminated with eggs and larvae of geohelminths, enabling dissemination of illnesses among animals and human beings. PMID:29694601

Distribution and risk factors of Ascarididae and other geohelminths in the soil of Uberlandia, Minas Gerais, Brazil.

PubMed

Mota, Kelem Cristina Pereira; Grama, Daliane Faria; Fava, Natália M Nasser; Úngari, Letícia Pereira; Faria, Elaine Silva Marques; Cury, Márcia Cristina

2018-01-01

Among the geohelminths, parasites from the Ascarididae family have a significant role in the human and animal health. This research aims to determine the prevalence of Ascarididae species in the soil in different areas located in a city of Minas Gerais State, Brazil (South America). The study was developed in squares, parks, sports clubs, orchards and municipal children's schools. Samples of sand/soil/grass were collected from January to August 2014. The optical microscope screening was performed through formal-ether and spontaneous sedimentation techniques. Out of the 183 collected samples, eight (4.4%) belonged to parks, 16 (8.7%) to sports clubs, 76 (41.5%) to squares, 23 (12.6%) to orchards, and 60 (32.8%) to schools. Out of the total, 28 (15.3%) contained Ascarididae eggs. Higher levels of positivity were demonstrated in the raining season (25.0%), in samples collected in the southern region of the town (25.1%), on ground soils (27.3%). Twenty-three (12.6%) were detected by the formal-ether sedimentation technique and 10 (5.5%) by spontaneous sedimentation technique. Therefore, it was concluded that the soils in the city of Uberlandia are contaminated with eggs and larvae of geohelminths, enabling dissemination of illnesses among animals and human beings.

Assessment of soil contamination by (210)Po and (210)Pb around heavy oil and natural gas fired power plants.

PubMed

Al-Masri, M S; Haddad, Kh; Doubal, A W; Awad, I; Al-Khatib, Y

2014-06-01

Soil contamination by (210)Pb and (210)Po around heavy oil and natural gas power plants has been investigated; fly and bottom ash containing enhanced levels of (210)Pb and (210)Po were found to be the main source of surface soil contamination. The results showed that (210)Pb and (210)Po in fly-ash (economizer, superheater) is highly enriched with (210)Pb and (210)Po, while bottom-ash (boiler) is depleted. The highest (210)Pb and (210)Po activity concentrations were found to be in economizer ash, whereas the lowest activity concentration was in the recirculator ash. On the other hand, (210)Pb and (210)Po activity concentrations in soil samples were found to be higher inside the plant site area than those samples collected from surrounding areas. The highest levels were found in the vicinity of Mhardeh and Tishreen power plants; both plants are operated by heavy oil and natural fuels, while the lowest values were found to be in those samples collected from Nasrieh power plant, which is only operated by one type of fuel, viz. natural gas. In addition, the levels of surface soil contamination have decreased as the distance from the power plant site center increased. Copyright © 2014 Elsevier Ltd. All rights reserved.

Point-of-care mobile digital microscopy and deep learning for the detection of soil-transmitted helminths and Schistosoma haematobium.

PubMed

Holmström, Oscar; Linder, Nina; Ngasala, Billy; Mårtensson, Andreas; Linder, Ewert; Lundin, Mikael; Moilanen, Hannu; Suutala, Antti; Diwan, Vinod; Lundin, Johan

2017-06-01

Microscopy remains the gold standard in the diagnosis of neglected tropical diseases. As resource limited, rural areas often lack laboratory equipment and trained personnel, new diagnostic techniques are needed. Low-cost, point-of-care imaging devices show potential in the diagnosis of these diseases. Novel, digital image analysis algorithms can be utilized to automate sample analysis. Evaluation of the imaging performance of a miniature digital microscopy scanner for the diagnosis of soil-transmitted helminths and Schistosoma haematobium, and training of a deep learning-based image analysis algorithm for automated detection of soil-transmitted helminths in the captured images. A total of 13 iodine-stained stool samples containing Ascaris lumbricoides, Trichuris trichiura and hookworm eggs and 4 urine samples containing Schistosoma haematobium were digitized using a reference whole slide-scanner and the mobile microscopy scanner. Parasites in the images were identified by visual examination and by analysis with a deep learning-based image analysis algorithm in the stool samples. Results were compared between the digital and visual analysis of the images showing helminth eggs. Parasite identification by visual analysis of digital slides captured with the mobile microscope was feasible for all analyzed parasites. Although the spatial resolution of the reference slide-scanner is higher, the resolution of the mobile microscope is sufficient for reliable identification and classification of all parasites studied. Digital image analysis of stool sample images captured with the mobile microscope showed high sensitivity for detection of all helminths studied (range of sensitivity = 83.3-100%) in the test set (n = 217) of manually labeled helminth eggs. In this proof-of-concept study, the imaging performance of a mobile, digital microscope was sufficient for visual detection of soil-transmitted helminths and Schistosoma haematobium. Furthermore, we show that deep learning-based image analysis can be utilized for the automated detection and classification of helminths in the captured images.

Point-of-care mobile digital microscopy and deep learning for the detection of soil-transmitted helminths and Schistosoma haematobium

PubMed Central

Holmström, Oscar; Linder, Nina; Ngasala, Billy; Mårtensson, Andreas; Linder, Ewert; Lundin, Mikael; Moilanen, Hannu; Suutala, Antti; Diwan, Vinod; Lundin, Johan

2017-01-01

ABSTRACT Background: Microscopy remains the gold standard in the diagnosis of neglected tropical diseases. As resource limited, rural areas often lack laboratory equipment and trained personnel, new diagnostic techniques are needed. Low-cost, point-of-care imaging devices show potential in the diagnosis of these diseases. Novel, digital image analysis algorithms can be utilized to automate sample analysis. Objective: Evaluation of the imaging performance of a miniature digital microscopy scanner for the diagnosis of soil-transmitted helminths and Schistosoma haematobium, and training of a deep learning-based image analysis algorithm for automated detection of soil-transmitted helminths in the captured images. Methods: A total of 13 iodine-stained stool samples containing Ascaris lumbricoides, Trichuris trichiura and hookworm eggs and 4 urine samples containing Schistosoma haematobium were digitized using a reference whole slide-scanner and the mobile microscopy scanner. Parasites in the images were identified by visual examination and by analysis with a deep learning-based image analysis algorithm in the stool samples. Results were compared between the digital and visual analysis of the images showing helminth eggs. Results: Parasite identification by visual analysis of digital slides captured with the mobile microscope was feasible for all analyzed parasites. Although the spatial resolution of the reference slide-scanner is higher, the resolution of the mobile microscope is sufficient for reliable identification and classification of all parasites studied. Digital image analysis of stool sample images captured with the mobile microscope showed high sensitivity for detection of all helminths studied (range of sensitivity = 83.3–100%) in the test set (n = 217) of manually labeled helminth eggs. Conclusions: In this proof-of-concept study, the imaging performance of a mobile, digital microscope was sufficient for visual detection of soil-transmitted helminths and Schistosoma haematobium. Furthermore, we show that deep learning-based image analysis can be utilized for the automated detection and classification of helminths in the captured images. PMID:28838305

Off-Site Radiation Exposure Review Project: Phase 2 soils program

DOE Office of Scientific and Technical Information (OSTI.GOV)

McArthur, R.D.; Miller, F.L. Jr.

1989-12-01

To help estimate population doses of radiation from fallout originating at the Nevada Test Site, soil samples were collected throughout the western United States. Each sample was prepared by drying and ball-milling, then analyzed by gamma-spectrometry to determine the amount of {sup 137}Cs it contained. Most samples were also analyzed by chemical separation and alpha-spectrometry to determine {sup 239 + 240}Pu and by isotope mass spectroscopy to determine the ratios of {sup 240}Pu to {sup 239}Pu and {sup 241}Pu to {sup 239}Pu. The total inventories of cesium and plutonium at 171 sites were computed from the results. This report describesmore » the sample collection, processing, and analysis, presents the analytical results, and assesses the quality of the data. 10 refs., 9 figs., 12 tabs.« less

Geo-Accumulation Indices of Heavy Metals in Soil and Groundwater of Kanpur, India Under Long Term Irrigation of Tannery Effluent.

PubMed

Dotaniya, M L; Meena, V D; Rajendiran, S; Coumar, M Vassanda; Saha, J K; Kundu, S; Patra, A K

2017-05-01

Soil and groundwater from long-term (>50 years) tannery effluent irrigated areas of Kanpur were analyzed and significant buildup of heavy metals such as Cr, Ni, Cd, Pb, Zn, and As in the range of 252-972, 23-30, 2.3-14.1, 23.7-58.8, 138-338 and 6.8-11 mg kg -1 , respectively in soil was found. Few groundwater samples in the effluent irrigated areas also exhibited high Cr concentration above the permissible limit of United States Environmental Protection Agency. The tannery effluents contained 1.53-57.3 ppm Cr, 0-0.12 ppm Ni, 0-0.02 ppm Cd, 0-0.07 ppm Pb, 0-0.48 ppm Zn and 0-0.03 ppm As. The Geo-accumulation index (I geo ) revealed that soil samples were unpolluted to moderately polluted with Cu, Ni, Zn, Pb and As; moderately polluted in case of Cd; and heavily to extremely polluted by Cr.

Speciation of cadmium and zinc with application to soil solutions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Holm, P.E.; Christensen, T.H.; Tjell, J.C.

1995-01-01

A two-part method has been developed for determination of Cd and Zn species in 50-mL soil solution samples containing low concentrations of Cd and Zn (1-10 {mu}g Cd L{sup -1} and 50-1000 {mu}g Zn L{sup -1}). The method uses two cation exchange resins (Amberlite CG 120 and Chelex 100) in a batch-column-batch procedure and relies on analytical determinations of Cd and Zn by graphite furnace atomic absorption spectrophotometry. The first part (batch) of the method allows determination of free divalent Cd{sup 2+} and Zn{sup 2+}. This part is experimentally sensitive to cation concentrations and ionic strength and these parameters shouldmore » be controlled during the experimental procedures. However, it is shown that Cd and Zn concentrations and pH do not influence the method. Speciations performed on samples containing chloride and sulfate were in accordance with theoretical calculations. The second part (column-batch) of the method operationally separates the complexed fraction into labile complexes, slowly labile complexes, and stable complexes. Chloro complexes were identified as labile complexes, while EDTA complexes were identified as stable complexes. The method works well with relatively small volumes of sample solutions and at low metal concentrations and may be useful in characterization of Cd and Zn in soil solutions. 12 refs., 6 figs., 3 tabs.« less

Presence and Persistence of Viable, Clinically Relevant Legionella pneumophila Bacteria in Garden Soil in the Netherlands

PubMed Central

van Heijnsbergen, E.; van Deursen, A.; Bouwknegt, M.; Bruin, J. P.; Schalk, J. A. C.

2016-01-01

ABSTRACT Garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. Legionella bacteria were detected in 22 of 177 garden soil samples (12%) by amoebal coculture. Of these 22 Legionella-positive soil samples, seven contained Legionella pneumophila. Several other species were found, including the pathogenic Legionella longbeachae (4 gardens) and Legionella sainthelensi (9 gardens). The L. pneumophila isolates comprised 15 different sequence types (STs), and eight of these STs were previously isolated from patients according to the European Working Group for Legionella Infections (EWGLI) database. Six gardens that were found to be positive for L. pneumophila were resampled after several months, and in three gardens, L. pneumophila was again isolated. One of these gardens was resampled four times throughout the year and was found to be positive for L. pneumophila on all occasions. IMPORTANCE Tracking the source of infection for sporadic cases of Legionnaires' disease (LD) has proven to be hard. L. pneumophila ST47, the sequence type that is most frequently isolated from LD patients in the Netherlands, is rarely found in potential environmental sources. As L. pneumophila ST47 was previously isolated from a garden soil sample during an outbreak investigation, garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. The detection of viable, clinically relevant Legionella strains indicates that garden soil is a potential source of Legionella bacteria, and future research should assess the public health implication of the presence of L. pneumophila in garden soil. PMID:27316958

Presence and Persistence of Viable, Clinically Relevant Legionella pneumophila Bacteria in Garden Soil in the Netherlands.

PubMed

van Heijnsbergen, E; van Deursen, A; Bouwknegt, M; Bruin, J P; de Roda Husman, A M; Schalk, J A C

2016-09-01

Garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. Legionella bacteria were detected in 22 of 177 garden soil samples (12%) by amoebal coculture. Of these 22 Legionella-positive soil samples, seven contained Legionella pneumophila Several other species were found, including the pathogenic Legionella longbeachae (4 gardens) and Legionella sainthelensi (9 gardens). The L. pneumophila isolates comprised 15 different sequence types (STs), and eight of these STs were previously isolated from patients according to the European Working Group for Legionella Infections (EWGLI) database. Six gardens that were found to be positive for L. pneumophila were resampled after several months, and in three gardens, L. pneumophila was again isolated. One of these gardens was resampled four times throughout the year and was found to be positive for L. pneumophila on all occasions. Tracking the source of infection for sporadic cases of Legionnaires' disease (LD) has proven to be hard. L. pneumophila ST47, the sequence type that is most frequently isolated from LD patients in the Netherlands, is rarely found in potential environmental sources. As L. pneumophila ST47 was previously isolated from a garden soil sample during an outbreak investigation, garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. The detection of viable, clinically relevant Legionella strains indicates that garden soil is a potential source of Legionella bacteria, and future research should assess the public health implication of the presence of L. pneumophila in garden soil. Copyright © 2016 van Heijnsbergen et al.

Microbial and enzymatic activity of soil contaminated with azoxystrobin.

PubMed

Baćmaga, Małgorzata; Kucharski, Jan; Wyszkowska, Jadwiga

2015-10-01

The use of fungicides in crop protection still effectively eliminates fungal pathogens of plants. However, fungicides may dissipate to various elements of the environment and cause irreversible changes. Considering this problem, the aim of the presented study was to evaluate changes in soil biological activity in response to contamination with azoxystrobin. The study was carried out in the laboratory on samples of sandy loam with a pH of 7.0 in 1 Mol KCl dm(-3). Soil samples were treated with azoxystrobin in one of four doses: 0.075 (dose recommended by the manufacturer), 2.250, 11.25 and 22.50 mg kg(-1) soil DM (dry matter of soil). The control soil sample did not contain fungicide. Bacteria were identified based on 16S rRNA gene sequencing, and fungi were identified by internal transcribed spacer (ITS) region sequencing. The study revealed that increased doses of azoxystrobin inhibited the growth of organotrophic bacteria, actinomycetes and fungi. The fungicide also caused changes in microbial biodiversity. The lowest values of the colony development (CD) index were recorded for fungi and the ecophysiological (EP) index for organotrophic bacteria. Azoxystrobin had an inhibitory effect on the activity of dehydrogenases, catalase, urease, acid phosphatase and alkaline phosphatase. Dehydrogenases were found to be most resistant to the effects of the fungicide, while alkaline phosphatase in the soil recovered the balance in the shortest time. Four species of bacteria from the genus Bacillus and two species of fungi from the genus Aphanoascus were isolated from the soil contaminated with the highest dose of azoxystrobin (22.50 mg kg(-1)).

Determination of free Zn2+ concentration in synthetic and natural samples with AGNES (Absence of Gradients and Nernstian Equilibrium Stripping) and DMT (Donnan Membrane Technique).

PubMed

Chito, Diana; Weng, Liping; Galceran, Josep; Companys, Encarnació; Puy, Jaume; van Riemsdijk, Willem H; van Leeuwen, Herman P

2012-04-01

The determination of free Zn(2+) ion concentration is a key in the study of environmental systems like river water and soils, due to its impact on bioavailability and toxicity. AGNES (Absence of Gradients and Nernstian Equilibrium Stripping) and DMT (Donnan Membrane Technique) are emerging techniques suited for the determination of free heavy metal concentrations, especially in the case of Zn(2+), given that there is no commercial Ion Selective Electrode. In this work, both techniques have been applied to synthetic samples (containing Zn and NTA) and natural samples (Rhine river water and soils), showing good agreement. pH fluctuations in DMT and N(2)/CO(2) purging system used in AGNES did not affect considerably the measurements done in Rhine river water and soil samples. Results of DMT in situ of Rhine river water are comparable to those of AGNES in the lab. The comparison of this work provides a cross-validation for both techniques. Copyright © 2012 Elsevier B.V. All rights reserved.

Contributions of root and shoot derived-C to soil organic matter throughout an agricultural soil profile assessed by compound-specific 13C analysis

NASA Astrophysics Data System (ADS)

Mendez-Millan, Mercedes; Dignac, Marie-France; Rumpel, Cornelia; Rasse, Daniel P.; Derenne, Sylvie

2010-05-01

The turnover of soil organic matter (SOM) is generally studied in the topsoil horizons, where the highest concentrations of organic carbon (OC) are found. Subsoils, although containing lower amounts of organic carbon compared to topsoils, greatly contribute to the total carbon stocks within a soil profile. An increase in SOM aliphaticity was observed during SOM degradation, and also down the soil profile, suggesting that the stable pool of SOM is enriched in aliphatic structures. These alkyl-C structures might mainly derive from cutins and suberins, two biomacromolecules, which contain biomarkers specific for shoot and root plant biomass. The aim of this study was to use cutin and suberin structural units to follow the incorporation of plant biomass originating from roots and shoots throughout an agricultural soil profile. We measured the 13C natural abundance of root and shoot biomarkers in samples taken from 15 to 105 cm depth in a C3/C4 chronosequence. After 9 years of maize (C4) cropping, the distribution of root biomarkers (diacids) significantly changed and their concentration increased compared to the wheat (CC3) soil. The largest increase was observed at 60-75 cm where diacids reached up to 134 ?g/gOC compared to 23 ?g/gOC in the wheat soil. Higher inputs from maize root biomass are also suggested by an average 13C enrichment of the root markers in the maize compared to the wheat soil.

Polybrominated diphenyl ether (PBDE) accumulation by earthworms (Eisenia fetida) exposed to biosolids-, polyurethane foam microparticle-, and Penta-BDE-amended soils.

PubMed

Gaylor, Michael O; Harvey, Ellen; Hale, Robert C

2013-12-03

Polybrominated diphenyl ether (PBDE) flame retardants have been used in consumer polymers at up to percent levels. While long viewed as biologically inaccessible therein, PBDEs may become bioaccessible following volatilization or polymer deterioration. PBDEs may then enter soils via polymer fragmentation or following land application of sewage sludge-derived biosolids. Studies of direct PBDE uptake from these materials by soil organisms are scarce. We thus exposed earthworms ( Eisenia fetida ) to artificial soil amended with a Class B anaerobically digested biosolid (ADB), an exceptional quality composted biosolid (CB), PBDE-containing polyurethane foam (PUF) microparticles, and Penta-BDE-spiked artificial soil (SAS). Worms accumulated mg/kg (lipid) ∑Penta-PBDE burdens from all substrates. Biota-soil accumulation factors (BSAFs) for worms exposed to ADB- and CB-amended soils were comparable after 28 d. BSAFs generally decreased with increasing congener KOW and substrate dosage. Biosolids-associated PBDE bioavailability was lower than spiked PBDEs. BSAFs for worms exposed to PUF microparticles ranged from 3.9 to 33.4, with ∑Penta-PBDE tissue burdens reaching 3740 mg/kg lipid. Congener accumulation patterns were similar in worms and polyethylene passive sampling devices immersed in ADB-amended soil coincident with exposed worms. However, passive sampler accumulation factors were lower than BSAFs. Our results demonstrate that PBDEs may accumulate in organisms ingesting soils containing biosolids or waste plastics. Such organisms may then transfer their burdens to predators or translocate them from the site of application/disposal.

Effect of soil type and moisture availability on the foraging behavior of the Formosan subterranean termite (Isoptera: Rhinotermitidae).

PubMed

Cornelius, Mary L; Osbrink, Weste L A

2010-06-01

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and shelter tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termites built shelter tubes on the sides of the containers. In containers with sand, termites built shelter tubes directly into the air and covered the sides of the container with a layer of sand. The interaction of soil type and moisture availability affected termite movement, feeding, and survival. In assays with moist soils, termites were more likely to aggregate in top soil over potting soil and peat moss. However, termites were more likely to move into containers with dry peat moss and potting soil than containers with dry sand and clay. Termites were also significantly more likely to move into containers with dry potting soil than dry top soil. In the assay with dry soils, termite mortality was high even though termites were able to travel freely between moist sand and dry soil, possibly due to desiccation caused by contact with dry soil. Evaporation from potting soil and peat moss resulted in significant mortality, whereas termites were able to retain enough moisture in top soil, sand, and clay to survive for 25 d. The interaction of soil type and moisture availability influences the distribution of foraging termites in microhabitats.

Stray animal and human defecation as sources of soil-transmitted helminth eggs in playgrounds of Peninsular Malaysia.

PubMed

Mohd Zain, S N; Rahman, R; Lewis, J W

2015-11-01

Soil contaminated with helminth eggs and protozoan cysts is a potential source of infection and poses a threat to the public, especially to young children frequenting playgrounds. The present study determines the levels of infection of helminth eggs in soil samples from urban and suburban playgrounds in five states in Peninsular Malaysia and identifies one source of contamination via faecal screening from stray animals. Three hundred soil samples from 60 playgrounds in five states in Peninsular Malaysia were screened using the centrifugal flotation technique to identify and determine egg/cyst counts per gram (EPG) for each parasite. All playgrounds, especially those in Penang, were found to be contaminated with eggs from four nematode genera, with Toxocara eggs (95.7%) the highest, followed by Ascaris (93.3%), Ancylostoma (88.3%) and Trichuris (77.0%). In addition, faeces from animal shelters were found to contain both helminth eggs and protozoan cysts, with overall infection rates being 54% and 57% for feline and canine samples, respectively. The most frequently occurring parasite in feline samples was Toxocara cati (37%; EPG, 42.47 ± 156.08), while in dog faeces it was Ancylostoma sp. (54%; EPG, 197.16 ± 383.28). Infection levels also tended to be influenced by season, type of park/playground and the texture of soil/faeces. The occurrence of Toxocara, Ancylostoma and Trichuris eggs in soil samples highlights the risk of transmission to the human population, especially children, while the presence of Ascaris eggs suggests a human source of contamination and raises the issue of hygiene standards and public health risks at sites under investigation.

Environmental contamination with Toxocara spp. eggs in public parks and playground sandpits of Greater Lisbon, Portugal.

PubMed

Otero, David; Alho, Ana M; Nijsse, Rolf; Roelfsema, Jeroen; Overgaauw, Paul; Madeira de Carvalho, Luís

Toxocarosis is a zoonotic parasitic disease transmitted from companion animals to humans. Environmental contamination with Toxocara eggs is considered to be the main source of human infections. In Portugal, knowledge regarding the current situation, including density, distribution and environmental contamination by Toxocara spp., is largely unknown. The present study investigated environmental contamination with Toxocara spp. eggs, in soil and faecal samples collected from public parks and playground sandpits in Greater Lisbon, Portugal. A total of 151 soil samples and 135 canine faecal samples were collected from 7 public sandpits and 12 public parks, over a 4 month-period. Soil samples were tested by a modified centrifugation and sedimentation/flotation technique and faecal samples were tested by an adaptation of the Cornell-Wisconsin method. Molecular analysis and sequencing were performed to discriminate Toxocara species in the soil. Overall, 85.7% of the sandpits (6/7) and 50.0% of the parks (6/12) were contaminated with Toxocara spp. eggs. The molecular analysis of soil samples showed that, 85.5% of the sandpits and 34.4% of the parks were contaminated with Toxocara cati eggs. Faecal analysis showed that 12.5% of the sandpits and 3.9% of the parks contained Toxocara canis eggs. In total, 53.0% of soil and 5.9% of faecal samples were positive for Toxocara spp. Additionally, 56.0% of the eggs recovered from the samples were embryonated after 60 days of incubation, therefore considered viable and infective. The average density was 4.2 eggs per hundred grams of soil. Public parks and playground sandpits in the Lisbon area were found to be heavily contaminated with T. cati eggs, representing a serious menace to public health as the studied areas represent common places where people of all ages, particularly children, recreate. This study sounds an alarm bell regarding the necessity to undertake effective measures such as reduction of stray animals, active faecal collection by pet owners, awareness campaigns and control strategies to decrease the high risk to both animal and human health. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.

Organic compound composition in soil and sediments collected in Jackson, Mississippi.

PubMed

Gołębiowski, Marek; Stepnowski, Piotr; Hemmingway, Tometrick; Leszczyńska, Danuta

2016-01-01

The aim of our study was to identify organic pollutants found in soil and sediment samples collected within the Jackson, MS metropolitan area. The chemical characterization of the organic compound fractions in soil and sediment samples was carried out by separating the organic fraction using column chromatography (CC) and quantitatively analyzing the polycyclic aromatic hydrocarbons (PAHs), n-alkanes and other organic compounds using gas chromatography-electron impact mass spectrometry (GC-MS). Fifty-six compounds were identified and quantified in the soil samples and 33 compounds were identified and quantified in the sediment samples. The PAHs, n-alkanes and other organic compound profiles in the soil and sediment samples were compared. The percentage contents of the organic compounds in the soil samples were very diverse (from traces to 12.44 ± 1.47%). The compounds present in the highest concentrations were n-alkanes: n-C31 (12.44 ± 1.47%), n-C29 (11.64 ± 1.21%), and n-C33 (8.95 ± 1.08%). The components occurring in smaller quantities (from 1% to 5%) were 2 PAHs (fluoranthene 1.28 ± 0.25%, pyrene 1.16 ± 0.20%), 10 n-alkanes from n-C21 (1.25 ± 0.29%) to n-C32 (2.67 ± 0.52%) and 11 other compounds (e.g., 2-pentanol, 4-methyl (3.33 ± 0.44%), benzyl butyl phthalate (4.25 ± 0.59%), benzenedicarboxylic acid (1.14 ± 0.08%), ethane, 1,1-diethoxy (3.15 ± 0.41) and hexadecanoic acid (2.52 ± 0.34). The soil samples also contained 30 compounds present in concentrations <1% (e.g., anthracene (0.13 ± 0.04%), n-C20 (0.84 ± 0.21%) and acetic acid (0.12 ± 0.04%). The compounds present in the highest concentrations in the sediment samples were PAHs: pyrene (7.73 ± 1.15%) and fluoranthene (6.23 ± 1.07%) and n-alkanes: n-C31 (6.74 ± 1.21%), n-C29 (6.65 ± 0.98%) and n-C27 (6.13 ± 1.09%). The remaining organic compounds were present in smaller quantities (< 5%).

Isolation and identification of halotolerant soil bacteria from coastal Patenga area.

PubMed

Rahman, Shafkat Shamim; Siddique, Romana; Tabassum, Nafisa

2017-10-30

Halotolerant bacteria have multiple uses viz. fermentation with lesser sterility control and industrial production of bioplastics. Moreover, it may increase the crop productivity of coastal saline lands in Bangladesh by transferring the salt tolerant genes into the plants. The study focused on the isolation and identification of the halotolerant bacteria from three soil samples, collected from coastal Patenga area. The samples were inoculated in nutrient media containing a wide range of salt concentrations. All the samples showed 2, 4 and 6% (w/v) salt tolerance. The isolates from Patenga soil (4, 6%) and beach soil (2%) showed catalase activity and all the isolates showed negative results for oxidase activity, indole production, lactose and motility. All the samples provided positive results for dextrose fermentation. Other tests provided mixed results. Based on the morphological characteristics, biochemical tests and ABIS software analysis the isolates fall within the Enterobacteriaceae, Clostridium and Corynebacterium, with a predominance of Vibrios. Overall the isolates can be considered as mild halotolerant, with the best growth observed at lower salinities and no halophilism detected. Among many possibilities, the genes responsible for the salt tolerant trait in these species can be identified, extracted and inserted into the crop plants to form a transgenic plant to result in higher yield for the rest of the year.

Effectiveness of mineral soil to adsorb the natural occurring radioactive material (norm), uranium and thorium

NASA Astrophysics Data System (ADS)

Amir, Muhammad Nur Iman; Ismail, Nurul Izzatiafifi; Wood, Ab. Khalik; Saat, Ahmad; Hamzah, Zaini

2015-04-01

A study has been performed on U-soil and Th-soil adsorption of three types of soil collected from Selangor State of Malaysia which are Saujana Putra, Bukit Changgang and Jenderam Hilir. In this study, natural radionuclide (U and Th) soil adsorption based on batch experiments with various initial concentrations of the radionuclide elements were carried out. Parameters that were set constant include pH at 5;amount of soil used was 5 g each, contact time was 24 hour and different initial concentration for each solution of U and Th which is 5 mg/L, 10 mg/L, 15 mg/L, 20 mg/L, 25 mg/L and 40 mg/L were used. The Kd values for each type of soil were determined in this batch experiments which was based on US-EPA method, in order to estimate adsorption capacity of the soil.The Kd values of Th found higher than Kd values of U for all of the soil samples, and the highest was found on the soil collected from Bukit Changgang. The soil clay content was one of factors to influence the adsorption of both U and Th from dilute initial solution. The U-soil and Th-soil adsorption process for all the soil samples studied are generally obeying unimolecular layer Langmuir isotherm model. From Langmuir isotherm, the maximum adsorption capacity for U was 0.393mg/g and for Th was 1.53 mg/g for the soil that was taken from Bukit Changgang. From the study, it suggested that the soil from Bukit Changgang applicable as potential enhanced barrier for site disposing waste containing U and Th.

Effectiveness of mineral soil to adsorb the natural occurring radioactive material (norm), uranium and thorium

DOE Office of Scientific and Technical Information (OSTI.GOV)

Amir, Muhammad Nur Iman; Ismail, Nurul Izzatiafifi; Wood, Ab. Khalik, E-mail: khalik@salam.uitm.edu.my

2015-04-29

A study has been performed on U-soil and Th-soil adsorption of three types of soil collected from Selangor State of Malaysia which are Saujana Putra, Bukit Changgang and Jenderam Hilir. In this study, natural radionuclide (U and Th) soil adsorption based on batch experiments with various initial concentrations of the radionuclide elements were carried out. Parameters that were set constant include pH at 5;amount of soil used was 5 g each, contact time was 24 hour and different initial concentration for each solution of U and Th which is 5 mg/L, 10 mg/L, 15 mg/L, 20 mg/L, 25 mg/L and 40 mg/L were used. The K{sub d}more » values for each type of soil were determined in this batch experiments which was based on US-EPA method, in order to estimate adsorption capacity of the soil.The K{sub d} values of Th found higher than Kd values of U for all of the soil samples, and the highest was found on the soil collected from Bukit Changgang. The soil clay content was one of factors to influence the adsorption of both U and Th from dilute initial solution. The U-soil and Th-soil adsorption process for all the soil samples studied are generally obeying unimolecular layer Langmuir isotherm model. From Langmuir isotherm, the maximum adsorption capacity for U was 0.393mg/g and for Th was 1.53 mg/g for the soil that was taken from Bukit Changgang. From the study, it suggested that the soil from Bukit Changgang applicable as potential enhanced barrier for site disposing waste containing U and Th.« less

Fine-scale spatial distribution of orchid mycorrhizal fungi in the soil of host-rich grasslands.

PubMed

Voyron, Samuele; Ercole, Enrico; Ghignone, Stefano; Perotto, Silvia; Girlanda, Mariangela

2017-02-01

Mycorrhizal fungi are essential for the survival of orchid seedlings under natural conditions. The distribution of these fungi in soil can constrain the establishment and resulting spatial arrangement of orchids at the local scale, but the actual extent of occurrence and spatial patterns of orchid mycorrhizal (OrM) fungi in soil remain largely unknown. We addressed the fine-scale spatial distribution of OrM fungi in two orchid-rich Mediterranean grasslands by means of high-throughput sequencing of fungal ITS2 amplicons, obtained from soil samples collected either directly beneath or at a distance from adult Anacamptis morio and Ophrys sphegodes plants. Like ectomycorrhizal and arbuscular mycobionts, OrM fungi (tulasnelloid, ceratobasidioid, sebacinoid and pezizoid fungi) exhibited significant horizontal spatial autocorrelation in soil. However, OrM fungal read numbers did not correlate with distance from adult orchid plants, and several of these fungi were extremely sporadic or undetected even in the soil samples containing the orchid roots. Orchid mycorrhizal 'rhizoctonias' are commonly regarded as unspecialized saprotrophs. The sporadic occurrence of mycobionts of grassland orchids in host-rich stands questions the view of these mycorrhizal fungi as capable of sustained growth in soil. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Enantioselectivity of anteiso-fatty acids in hitherto uninspected sample matrices.

PubMed

Eibler, Dorothee; Seyfried, Carolin; Vetter, Walter

2017-09-01

Anteiso-fatty acids (aFAs) are chiral molecules due to a methyl substituent on the antepenultimate carbon of the otherwise straight acyl chain. 12-Methyltetradecanoic acid (a15:0) and 14-methylhexadecanoic acid (a17:0) are the predominant aFAs in nature but their individual contributions e.g. to food lipids are usually low. Enantioselective data has been collected in fish, bovine milk/cheese, and Brussels sprouts. In this study, we determined the enantioselectivity of a15:0 and a17:0 in shea butter, moose and camel milk, two soil samples and mold (collected from contaminated cheese). For this purpose, sample lipids were extracted and containing fatty acids were converted into methyl esters. Methyl esters of aFAs were selectively enriched by hydrogenation, urea complexation and/or RP-HPLC-fractionation. Enantioselective gas chromatography with mass spectrometry operated in the selected ion monitoring mode using a chiral stationary phase consisting of 66% tert.-butyldimethylsilylated β-cyclodextrin in OV-1701. While a15:0 and a17:0 in moose milk were (S)-enantiopure, all other determined samples contained up to 10% (R)-aFAs. The highest proportions of (R)-enantiomers were detected in the soil samples (ee=80%). Copyright © 2017 Elsevier B.V. All rights reserved.

Lead isotopic compositions of soil and near-surface till profiles from a watershed containing arsenic-enriched groundwater in coastal Maine

USGS Publications Warehouse

Ayuso, Robert; Foley, Nora; Wandless, Gregory; Dillingham, Jeremy; Colvin, Anna

2005-01-01

Lead isotope compositions of soils and near-surface tills from an area of coastal Maine known to have groundwater with anomalously high arsenic contents were measured in order to determine the source of the lead and, by inference, possible sources of arsenic. Five soil and till sites were selected for detailed chemical and isotopic analysis. To construct profiles of the soil and till horizons, five samples were collected at 10-cm intervals from the surface to the base of each horizon. Total lead and arsenic concentrations and lead isotopic compositions were measured for 48 leaches and bulk residues. The soils and tills are underlain by sulfidic schists of the Penobscot Formation. Several generations of minerals containing arsenic and lead exist in the regional bedrock, including rock-forming silicates (feldspar and micas), sulfide minerals formed during diagenesis (for example, arsenic-rich pyrite), and sulfide and oxide minerals that formed as a result of Silurian metamorphic and igneous events (for example, arsenopyrite, galena, iron-oxides, and arsenic-sulfides). A young group of secondary minerals (for example, iron-hydroxides, arsenic-hydroxides, lead-sulfate, and arsenic-jarosite) formed from recent weathering and pedogenic processes.

Assessing the strength of soil aggregates produced by two types of organic matter amendments using the ultrasonic energy

NASA Astrophysics Data System (ADS)

Zhu, Zhaolong; minasny, Budiman; Field, Damien; Angers, Denis

2017-04-01

The presence of organic matter (OM) is known to stimulate the formation of soil aggregates, but the aggregation strength may vary with different amount and type/quality of OM. Conventionally wet sieving method was used to assess the aggregates' strength. In this study, we wish to get insight of the effects of different types of C inputs on aggregate dynamics using quantifiable energy via ultrasonic agitation. A clay soil with an inherently low soil organic carbon (SOC) content, was amended with two different sources of organic matter (alfalfa, C:N = 16.7 and barley straw, C:N = 95.6) at different input levels (0, 10, 20, & 30 g C kg-1 soil). The soil's inherent macro aggregates were first destroyed via puddling. The soils were incubated in pots at moisture content 70% of field capacity for a period of 3 months. The pots were housed in a 1.2L sealed opaque plastic container. The CO2 generated during the incubation was captured by a vial of NaOH which was placed in each of the sealed containers and sampled per week. At 14, 28, 56, and 84 days, soil samples were collected and the change in aggregation was assessed using a combination of wet sieving and ultrasonic agitation. The relative strength of aggregates exposed to ultrasonic agitation was modelled using the aggregate disruption characteristic curve (ADCC) and soil dispersion characteristic curve (SDCC). Both residue quality and quantity of organic matter input influenced the amount of aggregates formed and their relative strength. The MWD of soils amended with alfalfa residues was greater than that of barley straw at lower input rates and early in the incubation. In the longer term, the use of ultrasonic energy revealed that barley straw resulted in stronger aggregates, especially at higher input rates despite showing similar MWD as alfalfa. The use of ultrasonic agitation, where we quantify the energy required to liberate and disperse aggregates allowed us to differentiate the effects of C inputs on the size of stable aggregates and their relative strength.

Arsenic, Sb and Bi contamination of soils, plants, waters and sediments in the vicinity of the Dalsung Cu-W mine in Korea.

PubMed

Jung, Myung Chae; Thornton, Iain; Chon, Hyo-Taek

2002-08-05

The objective of this study is to investigate environmental contamination derived from metalliferous mining activities. In the study area, the Dalsung Cu-W mine, soils, various crop plants, stream waters, sediments and particulates were sampled in and around the mine and analyzed for As, Sb and Bi by ICP-AES with a hydride generator. In addition, soil pH, cation exchange capacity, loss-on-ignition and soil texture were also measured. Concentrations of As, Sb and Bi in surface soils sampled in the mine dump sites averaged 2500, 54 and 436 microg g(-1), respectively. Relatively lower concentrations, however, were found in soils from alluvial and high land sites and household garden sites. Arsenic, Sb and Bi contents in plant samples varied depending upon their species and parts, with higher concentrations in spring onions, soybean leaves and perilla leaves and lower levels in red peppers, corn grains and jujube grains. These results confirm that elemental concentrations in plant leaves are much higher than those in plant grain. Elevated levels of As, Sb and Bi were also found in stream sediments sampled in the vicinity of the mine and decreased with distance from the mine. Concentrations in stream water samples ranged from 0.8 to 19.1 microg As l(-1) and from 0.3 to 8.4 microg Bi l(-1); all the samples contained less than 1.0 microg Sb l(-1). Because of very low particulate loading at the time of sampling, the metal contents in particulates were very low (< 8.2 microg As l(-1), < 0.22 microg Sb l(-1) and 2.8 microg Bi l(-1). This may be mainly due to the low solubility of those elements under moderately acidic and oxidizing conditions of the mining area.

Characterization of EPA's 16 priority pollutant polycyclic aromatic hydrocarbons (PAHs) in tank bottom solids and associated contaminated soils at oil exploration and production sites in Texas.

PubMed

Bojes, Heidi K; Pope, Peter G

2007-04-01

The purpose of this study was to determine the concentration and types of polycyclic aromatic hydrocarbons (PAHs), a group of environmentally toxic and persistent chemicals, at contaminated oil exploration and production (E&P) sites located in environmentally sensitive and geographically distinct areas throughout Texas. Samples of tank bottom solids, the oily sediment that collects at the bottom of the tanks, were collected from inactive crude oil storage tanks at E&P sites and hydrocarbon contaminated soil samples were collected from the area surrounding each tank that was sampled. All samples were analyzed for the 16 PAH priority pollutant listed by US EPA and for total petroleum hydrocarbons (TPH). The results demonstrate that overall average PAH concentrations were significantly higher in tank bottom solids than in contaminated soils. Total PAH concentrations decreased predictably with diminishing hydrocarbon concentrations; but the percent fraction of carcinogenic PAHs per total measured PAH content increased from approximately 12% in tank bottom solids to about 46% in the contaminated soils. These results suggest that the PAH content found in tank bottom solids cannot reliably be used to predict the PAH content in associated contaminated soil. Comparison of PAHs to conservative risk-based screening levels for direct exposure to soil and leaching from soil to groundwater indicate that PAHs are not likely to exceed default risk-based thresholds in soils containing TPH of 1% (10,000mg/kg) or less. These results show that the magnitude of TPH concentration may be a useful indicator of potential risk from PAHs in crude oil-contaminated soils. The results also provide credibility to the 1% (10,000mg/kg) TPH cleanup level, used in Texas as a default management level at E&P sites located in non-sensitive areas, with respect to PAH toxicity.

To what extent clay mineralogy affects soil aggregation? Consequences for soil organic matter stabilization

NASA Astrophysics Data System (ADS)

Fernandez-Ugalde, O.; Barré, P.; Hubert, F.; Virto, I.; Chenu, C.; Ferrage, E.; Caner, L.

2012-12-01

Aggregation is a key process for soil functioning as it influences C storage, vulnerability to erosion and water holding capacity. While the influence of soil organic C on aggregation has been documented, much less is known about the role of soil mineralogy. Soils usually contain a mixture of clay minerals with contrasted surface properties, which should result on different abilities of clay minerals to aggregation. We took advantage of the intrinsic mineral heterogeneity of a temperate Luvisol to compare the role of clay minerals (illite, smectite, kaolinite, and mixed-layer illite-smectite) in aggregation. In a first step, grassland and tilled soil samples were fractionated in water in aggregate-size classes according to the hierarchical model of aggregation (Tisdall and Oades, 1982). Clay mineralogy and organic C in the aggregate-size classes were analyzed. The results showed that interstratified minerals containing swelling phases accumulated in aggregated fractions (>2 μm) compared to free clay fractions (<2 μm) in the two land-uses. The accumulation increased from large macro-aggregates (>500 μm) to micro-aggregates (50-250 μm). C concentration and C/N ratio followed the opposite trend. These results constitute a clay mineral-based evidence for the hierarchical model of aggregation, which postulates an increasing importance of the reactivity of clay minerals in the formation of micro-aggregates compared to larger aggregates. In the latter aggregates, formation relies on the physical enmeshment of particles by fungal hyphae, and root and microbial exudates. In a second step, micro-aggregates from the tilled soil samples were submitted to increasingly disaggregating treatments by sonication to evaluate the link between their water stability and clay mineralogy. Micro-aggregates with increasing stability showed an increase of interstratified minerals containing swelling phases and C concentration for low intensities of disaggregation (from 0 to 5 J mL-1). This suggests that swelling phases promote their stability. Swelling phases and organic C decreased for greater intensities of disaggregation. These results and the SEM images taken at different disaggregation intensities indicate that when increasing disaggregation intensity above 5 J mL-1, the recovered material consists on sand particles covered by physical coatings of illite and kaolinite. Our results show that different clay minerals have different contribution to soil aggregation. Swelling phases are especially important for water-stable aggregates formation, whereas illite and kaolinite can either contribute to aggregation or been coated to sand grains in "mineral aggregates", without porosity and organic C protection capability. In conclusion, soils with large proportion of swelling clay minerals have greater potential for carbon storage by occlusion in aggregates and greater resistance to erosion. Tisdall JM, Oades JM (1982) Organic matter and water-stable aggregates in soils. J Soil Sci 62: 141-163.

Linking Carbonic Anhydrase Abundance and Diversity in Soils to Ecological Function

NASA Astrophysics Data System (ADS)

Pang, E.; Meredith, L. K.; Welander, P. V.

2015-12-01

Carbonic anhydrase (CA) is an ancient enzyme widespread among bacteria, archaea, and eukarya that catalyzes the following reaction: CO2 + H2O ⇌ HCO3- + H+. Its functions are critical for key cellular processes such as concentrating CO2 for autotrophic growth, pH regulation, and pathogen survival in hosts. Currently, there are six known CA classes (α, β, γ, δ, η, ζ) arising from several distinct evolutionary lineages. CA are widespread in sequenced genomes, with many organisms containing multiple classes of CA or multiple CA of the same class. Soils host rich microbial communities with diverse and important ecological functions, but the diversity and abundance of CA in soils has not been explored. CA appears to play an important, but poorly understood, role in some biogeochemical cycles such as those of CO2 and its oxygen isotope composition and also carbonyl sulfide (COS), which are potential tracers in predictive carbon cycle models. Recognizing the prevalence and functional significance of CA in soils, we used a combined bioinformatics and molecular biology approach to address fundamental questions regarding the abundance, diversity, and function of CA in soils. To characterize the abundance and diversity of the different CA classes in soils, we analyzed existing soil metagenomic and metatranscriptomic data from the DOE Joint Genome Institute databases. Out of the six classes of CA, we only found the α, β, and γ classes to be present in soils, with the β class being the most abundant. We also looked at genomes of sequenced soil microorganisms to learn what combination of CA classes they contain, from which we can begin to predict the physiological role of CA. To characterize the functional roles of the different CA classes in soils, we collected soil samples from a variety of biomes with diverse chemical and physical properties and quantified the rate of two CA-mediated processes: soil uptake of COS and acceleration of the oxygen isotope exchange between CO2 and H2O. We employed PCR-based methods to quantify the abundance and diversity of CA encoding genes and their expression in our samples to link CA classes to the gas flux data. These studies provide the first survey of CA in soils, a step towards understanding CA's potentially significant role in microbial survival and microbe-mediated biogeochemical cycles.

After Sample-Delivery Attempt, Sol 62

NASA Technical Reports Server (NTRS)

2008-01-01

NASA's Phoenix Mars Lander collected a soil sample and attempted to deliver some of it to a laboratory oven on the deck during the mission's 62nd Martian day, or sol, (July 28, 2008). The sample came from a hard layer at the bottom of the 'Snow White' trench and might have contained water ice mixed with the soil. This image taken after the attempt to deliver the sample through the open doors to cell number zero on the Thermal and Evolved-Gas Analyzer shows that very little of the soil fell onto the screened opening.

Not enough material reached the oven, through a funnel under the screen, to proceed with analysis of the sample material.

Phoenix's Robotic Arm Camera took this image at 7:54 a.m. local solar time on Sol 62. The size of the screened opening is about 10 centimeters (4 inches) long by 4 centimeters (1.5 inches) wide.

The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

An integrated view of the chemistry and mineralogy of martian soils

USGS Publications Warehouse

Yen, A. S.; Gellert, Ralf; Schroder, C.; Morris, R.V.; Bell, J.F.; Knudson, A.T.; Clark, B. C.; Ming, D. W.; Crisp, J.A.; Arvidson, R. E.; Blaney, D.; Brückner, J.; Christensen, P.R.; DesMarais, D.J.; De Souza, P.A.; Economou, T.E.; Ghosh, A.; Hahn, B.C.; Herkenhoff, K. E.; Haskin, L.A.; Hurowitz, J.A.; Joliff, B.L.; Johnson, J. R.; Klingelhofer, G.; Madsen, M.B.; McLennan, S.M.; McSween, H.Y.; Richter, L.; Rieder, R.; Rodionov, D.; Soderblom, L.; Squyres, S. W.; Tosca, N.J.; Wang, A.; Wyatt, M.; Zipfel, J.

2005-01-01

The mineralogical and elemental compositions of the martian soil are indicators of chemical and physical weathering processes. Using data from the Mars Exploration Rovers, we show that bright dust deposits on opposite sides of the planet are part of a global unit and not dominated by the composition of local rocks. Dark soil deposits at both sites have similar basaltic mineralogies, and could reflect either a global component or the general similarity in the compositions of the rocks from which they were derived. Increased levels of bromine are consistent with mobilization of soluble salts by thin films of liquid water, but the presence of olivine in analysed soil samples indicates that the extent of aqueous alteration of soils has been limited. Nickel abundances are enhanced at the immediate surface and indicate that the upper few millimetres of soil could contain up to one per cent meteoritic material.

Determination of trace heavy metals in soil and sediments by atomic spectrometry following preconcentration with Schiff bases on Amberlite XAD-4.

PubMed

Kara, Derya; Fisher, Andrew; Hill, Steve J

2009-06-15

A matrix separation and analyte preconcentration system using Amberlite XAD copolymer resins functionalized by Schiff base reactions coupled with atomic spectrometry has been developed. Three different functionalized Amberlite XAD resins were synthesized using 4-phenylthiosemicarbazide, 2,3-dihydroxybenzaldehyde and 2-thiophenecarboxaldehyde as reagents. These resins could be used to preconcentrate transition and other trace heavy metal analytes from nitric acid digests of soil and sediment samples. Analyte retention was shown to work well at pH 6.0. After treatment of the digests with sodium fluoride and buffering to pH 6, samples that contain extremely large concentrations of iron were analysed for trace analytes without the excess iron overloading the capacity of the resin. The analytes Cd, Co, Cu, Ni and Pb were preconcentrated from acid extracts of certified soil/sediment samples and then eluted with 0.1M HNO(3) directly to the detection system. Flame atomic absorption spectrometry was used as a means of detection during the studies. The efficiency of the chelating resin and the accuracy of the proposed method were evaluated by the analysis of soil (SO-2) and sediment (LGC 6157 and MESS-3) certified reference materials.

Magnetic Properties of Soils from Sarimukti Landfill as Proxy Indicators of Pollution (Case Study: Desa Sarimukti, Kabupaten Bandung Barat)

NASA Astrophysics Data System (ADS)

Cita Novala, Gesti; Fitriani, Dini; Susanto, Kusnahadi; Hajar Kirana, Kartika

2016-01-01

Leachate is the liquid arises from waste disposal. It contains heavy metals and magnetic minerals. Leachate could penetrate into sub surface that cause soil contamination. We have studied magnetic properties of soils from three zones in the Sarimukti landfill. We measured magnetic susceptibility in dual frequency and temperature dependent of susceptibility. The results showed that magnetic susceptibility at low frequency (xlf) of soil samples have the value ranging from 50-1400 (x 10-8 m3/kg). It infers that the samples were dominated by ferrimagnetic minerals. The relative difference of magnetic susceptibility measured at two frequency (xfd(%)) are less than 4%. It indicates that magnetic minerals probably derived from anthropogenic sources. There is negative correlation between xlf and Xfd(%). It supports the analysis that the source of magnetic minerals is anthropogenic. The results of the temperature dependent magnetic susceptibility measurements showed that the peak of magnetic susceptibility in heating curve occurs at the temperature about 200°C and 500°C. After 500°C, heating curve rapidly decreases. It can be inferred that the dominant type of magnetic minerals in the samples is titanomagnetite.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Thomas, J.M.; Callahan, C.A.; Cline, J.F.

Bioassays were used in a three-phase research project to assess the comparative sensitivity of test organisms to known chemicals, determine if the chemical components in field soil and water samples containing unknown contaminants could be inferred from our laboratory studies using known chemicals, and to investigate kriging (a relatively new statistical mapping technique) and bioassays as methods to define the areal extent of chemical contamination. The algal assay generally was most sensitive to samples of pure chemicals, soil elutriates and water from eight sites with known chemical contamination. Bioassays of nine samples of unknown chemical composition from the Rocky Mountainmore » Arsenal (RMA) site showed that a lettuce seed soil contact phytoassay was most sensitive. In general, our bioassays can be used to broadly identify toxic components of contaminated soil. Nearly pure compounds of insecticides and herbicides were less toxic in the sensitive bioassays than were the counterpart commercial formulations. This finding indicates that chemical analysis alone may fail to correctly rate the severity of environmental toxicity. Finally, we used the lettuce seed phytoassay and kriging techniques in a field study at RMA to demonstrate the feasibility of mapping contamination to aid in cleanup decisions. 25 references, 9 figures, 9 tables.« less

Diversity of epothilone producers among Sorangium strains in producer-positive soil habitats.

PubMed

Li, Shu-Guang; Zhao, Lin; Han, Kui; Li, Peng-Fei; Li, Zhi-Feng; Hu, Wei; Liu, Hong; Wu, Zhi-Hong; Li, Yue-Zhong

2014-03-01

Large-scale surveys show that the anti-tumour compounds known as epothilones are produced by only a small proportion of Sorangium strains, thereby greatly hampering the research and development of these valuable compounds. In this study, to investigate the niche diversity of epothilone-producing Sorangium strains, we re-surveyed four soil samples where epothilone producers were previously found. Compared with the < 2.5% positive strains collected from different places, epothilone producers comprised 25.0-75.0% of the Sorangium isolates in these four positive soil samples. These sympatric epothilone producers differed not only in their 16S rRNA gene sequences and morphologies but also in their production of epothilones and biosynthesis genes. A further exploration of 14 soil samples collected from a larger area around a positive site showed a similar high positive ratio of epothilone producers among the Sorangium isolates. The present results suggest that, in an area containing epothilone producers, the long-term genetic variations and refinements resulting from selective pressure form a large reservoir of epothilone-producing Sorangium strains with diverse genetic compositions. © 2013 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

Evaluation of soil toxicity at Joliet Army Ammunition Plant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simini, M.; Amos, J.C.; Wentsel, R.S.

1995-04-01

Environmental toxicity testing and chemical analyses of soil were performed as part of an ecological risk assessment at the Joliet Army Ammunition Plant (JAAP), Joliet, Illinois. Soils were collected from an area where munitions were loaded, assembled, and packed (area L7, group 1), and from an area where waste explosives were burned on unprotected soil (area L2). Control samples were collected from an adjacent field. Soil toxicity was determined using early seedling growth and vigor tests, earthworm survival and growth tests, and Microtox{reg_sign} assays. Relative toxicity of soils was determined within each area based on statistical significant (p = 0.05)more » of plant and earthworm growth and survival, and the effective concentration at which luminescence of the bacterium Photobacterium phosphoreum was reduced by 50% (EC50) in the Microtox assay. Samples were designated as having high, moderate, or no significant toxicity. Soil that had significant toxicity according to at least one test, and representative samples showing no toxicity, were analyzed for munitions via HPLC. Chemical residues found in soils were 2,4,6-trinitrotoluene (TNT); 1,3,5-trinitrobenzene (TNB); 2,4-dinitrotoluene (2,4-DNT); 2,6-dinitrotoluene; 2-amino-4,6-DNT; 4-amino-2,6-DNT; 1,3,5-trinitro-1,3,5-triazine (RDX); and octahydro-1,3,5,7-tetranitro-1,3,5,7-tetrazocine (HMX). All soils with no significant toxicity were void of these chemicals. However, some soils void of munitions still showed toxicity that may have been caused by elevated levels of heavy metals. Linear regressions of toxicity test results vs. chemical concentrations showed that TNT and TNB accounted for most off the soil toxicity. Lowest-observable-effect concentrations (LOEC) of TNT were determined from these data. This study presents a simple, relatively inexpensive methodology for assessing toxicity of soils containing TNT, RDX, and other contaminants related to munitions production.« less

Changes in quantity and spectroscopic properties of water-extractable organic matter during soil aquifer treatment.

PubMed

Xue, S; Zhao, Q L; Wei, L L; Ma, X P; Tie, M

2013-01-01

The aim of this study was to identify qualitative and quantitative changes in the character of water-extractable organic matter (WEOM) in soils as a consequence of soil aquifer treatment (SAT). Soil samples were obtained from a soil-column system with a 2-year operation, and divided into seven layers from top to bottom: CS1 (0-12.5 cm), CS2 (12.5-25 cm), CS3 (25-50 cm), CS4 (50-75 cm), CS5 (75-100 cm), CS6 (100-125 cm) and CS7 (125-150 cm). A sample of the original soil used to pack the columns was also analysed to determine the effects of SAT. Following 2 years of SAT operation, both soil organic carbon and water-extractable organic carbon were shown to accumulate in the top soil layer (0-12.5 cm), and to decrease in soil layers deeper than 12.5 cm. The WEOM in the top soil layer was characterized by low aromaticity index (AI), low emission humification index (HIX) and low fluorescence efficiency index (F(eff)). On the other hand, the WEOM in soil layers deeper than 12.5 cm had increased values of HIX and F(eff), as well as decreased AI values relative to the original soil before SAT. In all soil layers, the percentage of hydrophobic and transphilic fractions decreased, while that of the hydrophilic fraction increased, as a result of SAT. The production of the amide-2 functional groups was observed in the top soil layer. SAT operation also led to the enrichment of hydrocarbon and amide-1 functional groups, as well as the depletion of oxygen-containing functional groups in soil layers deeper than 12.5 cm.

The apollo 15 lunar samples: A preliminary description

USGS Publications Warehouse

Gast, P.W.; Phinney, W.C.; Duke, M.B.; Silver, L.T.; Hubbard, N.J.; Heiken, G.H.; Butler, P.; McKay, D.S.; Warner, J.L.; Morrison, D.A.; Horz, F.; Head, J.; Lofgren, G.E.; Ridley, W.I.; Reid, A.M.; Wilshire, H.; Lindsay, J.F.; Carrier, W.D.; Jakes, P.; Bass, M.N.; Brett, P.R.; Jackson, E.D.; Rhodes, J.M.; Bansal, B.M.; Wainwright, J.E.; Parker, K.A.; Rodgers, K.V.; Keith, J.E.; Clark, R.S.; Schonfeld, E.; Bennett, L.; Robbins, Martha M.; Portenier, W.; Bogard, D.D.; Hart, W.R.; Hirsch, W.C.; Wilkin, R.B.; Gibson, E.K.; Moore, C.B.; Lewis, C.F.

1972-01-01

Samples returned from the Apollo 15 site consist of mare basalts and breccias with a variety of premare igneous rocks. The mare basalts are from at least two different lava flows. The bulk chemical compositions and textures of these rocks confirm the previous conclusion that the lunar maria consist of a series of extrusive volcanic rocks that are rich in iron and poor in sodium. The breccias contain abundant clasts of anorthositic fragments along with clasts of basaltic rocks much richer in plagioclase than the mare basalts. These two rock types also occur as common components in soil samples from this site. The rocks and soils from both the front and mare region exhibit a variety of shock characteristics that can best be ascribed to ray material from the craters Aristillus or Autolycus.

Biochemical changes in black oat (avena strigosa schreb) cultivated in vineyard soils contaminated with copper.

PubMed

Girotto, Eduardo; Ceretta, Carlos A; Rossato, Liana V; Farias, Julia G; Brunetto, Gustavo; Miotto, Alcione; Tiecher, Tadeu L; de Conti, Lessandro; Lourenzi, Cledimar R; Schmatz, Roberta; Giachini, Admir; Nicoloso, Fernando T

2016-06-01

Soils used for the cultivation of grapes generally have a long history of copper (Cu) based fungicide applications. As a result, these soils can accumulate Cu at levels that are capable of causing toxicity in plants that co-inhabit the vineyards. The aim of the present study was to evaluate growth parameters and oxidative stress in black oat plants grown in vineyard soils contaminated with high levels of Cu. Soil samples were collected from the Serra Gaúcha and Campanha Gaúcha regions, which are the main wine producing regions in the state of Rio Grande do Sul, in southern Brazil. Experiments were conducted in a greenhouse in 2009, with soils containing Cu concentrations from 2.2 to 328.7 mg kg(-1). Evaluated parameters included plant root and shoot dry matter, Cu concentration in the plant's tissues, and enzymatic and non-enzymatic biochemical parameters related to oxidative stress in the shoots of plants harvested 15 and 40 days after emergence. The Cu absorbed by plants predominantly accumulated in the roots, with little to no translocation to the shoots. Even so, oat plants showed symptoms of toxicity when grown in soils containing high Cu concentrations. The enzymatic and non-enzymatic antioxidant systems of oat plants were unable to reverse the imposed oxidative stress conditions. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Land use type significantly affects microbial gene transcription in soil.

PubMed

Nacke, Heiko; Fischer, Christiane; Thürmer, Andrea; Meinicke, Peter; Daniel, Rolf

2014-05-01

Soil microorganisms play an essential role in sustaining biogeochemical processes and cycling of nutrients across different land use types. To gain insights into microbial gene transcription in forest and grassland soil, we isolated mRNA from 32 sampling sites. After sequencing of generated complementary DNA (cDNA), a total of 5,824,229 sequences could be further analyzed. We were able to assign nonribosomal cDNA sequences to all three domains of life. A dominance of bacterial sequences, which were affiliated to 25 different phyla, was found. Bacterial groups capable of aromatic compound degradation such as Phenylobacterium and Burkholderia were detected in significantly higher relative abundance in forest soil than in grassland soil. Accordingly, KEGG pathway categories related to degradation of aromatic ring-containing molecules (e.g., benzoate degradation) were identified in high abundance within forest soil-derived metatranscriptomic datasets. The impact of land use type forest on community composition and activity is evidently to a high degree caused by the presence of wood breakdown products. Correspondingly, bacterial groups known to be involved in lignin degradation and containing ligninolytic genes such as Burkholderia, Bradyrhizobium, and Azospirillum exhibited increased transcriptional activity in forest soil. Higher solar radiation in grassland presumably induced increased transcription of photosynthesis-related genes within this land use type. This is in accordance with high abundance of photosynthetic organisms and plant-infecting viruses in grassland.

BIOACCESSIBILITY TESTS ACCURATELY ESTIMATE ...

EPA Pesticide Factsheets

Hazards of soil-borne Pb to wild birds may be more accurately quantified if the bioavailability of that Pb is known. To better understand the bioavailability of Pb to birds, we measured blood Pb concentrations in Japanese quail (Coturnix japonica) fed diets containing Pb-contaminated soils. Relative bioavailabilities were expressed by comparison with blood Pb concentrations in quail fed a Pb acetate reference diet. Diets containing soil from five Pb-contaminated Superfund sites had relative bioavailabilities from 33%-63%, with a mean of about 50%. Treatment of two of the soils with P significantly reduced the bioavailability of Pb. The bioaccessibility of the Pb in the test soils was then measured in six in vitro tests and regressed on bioavailability. They were: the “Relative Bioavailability Leaching Procedure” (RBALP) at pH 1.5, the same test conducted at pH 2.5, the “Ohio State University In vitro Gastrointestinal” method (OSU IVG), the “Urban Soil Bioaccessible Lead Test”, the modified “Physiologically Based Extraction Test” and the “Waterfowl Physiologically Based Extraction Test.” All regressions had positive slopes. Based on criteria of slope and coefficient of determination, the RBALP pH 2.5 and OSU IVG tests performed very well. Speciation by X-ray absorption spectroscopy demonstrated that, on average, most of the Pb in the sampled soils was sorbed to minerals (30%), bound to organic matter 24%, or present as Pb sulfate 18%. Ad

Ecotoxicological characteristic of a soil polluted by radioactive elements and heavy metals before and after its bioremediation

NASA Astrophysics Data System (ADS)

Georgiev, P.; Groudev, S.; Spasova, I.; Nikolova, M.

2012-04-01

Cinnamon soils from southeastern Bulgaria are heavily polluted with radionuclides (uranium, radium) and toxic heavy metals (copper and lead) due to the winds transportation of fine particles from flotation dumps to the soil surface. As a result of this, the polluted soils are characterized by a slightly alkaline pH (7.82) and positive net neutralization potential (+136.8 kg CaCO3/t). A fresh sample of cinnamon soil was subjected to remediation under laboratory conditions in four lysimeters each containing 70 kg of soil. The preliminary study revealed that most of the pollutants were presented as carbonate, reducible and oxidisable mobility fractions, i.e. pollutants ions were specifically adsorbed by carbonate and ferric iron minerals or were capsulated in sulfides. The applied soil treatment was connected with leaching of the pollutants located mainly in the horizon A, their transportation through the soil profile as soluble forms, and their precipitation in the rich-in-clay subhorizon B3. The efficiency of leaching depended on the activity of the indigenous microflora and on the chemical processes connected with solubilization of pollutants and formation of stable complexes with some organic compounds, chloride and hydrocarbonate ions. These processes were considerably enhanced by adding hay to the horizon A and irrigating the soil with water solutions containing the above-mentioned ions and some nutrients. After 18 months of treatment, each of the soil profiles in the different lysimeters was divided into five sections reflecting the different soil layers. The soil in these sections was subjected to a detailed chemical analysis and the data obtained were compared with the relevant data obtained before the start of the experiment. The best leaching of pollutants from horizon A was measured in the variants where soil mulching was applied. For example, the best leaching of lead (54.5 %) was found in the variant combining this technique and irrigation with solutions containing only nutrients. The best leaching of uranium (66.3 %), radium (62.5 %), and copper (15.1 %) were measured in the variant in which the soil was subjected to mulching and irrigation with alkaline solutions containing hydocarbonate ions. Despite the higher removal of these pollutants from the soil, the acute soil toxicity towards earthworms (Lumbricus terrestris) was higher in comparison to the toxicity of soil that had been treated in the other variant. Furthermore, the highly alkaline soil pH (10.47) that was determined due to the applied alkaline leaching resulted in an acute soil toxicity to oats (Avena sativa) and clover (Trifolium repens) that was even higher in comparison to the toxicity of the non-treated soil. These data revealed that the soil detoxification was depended not only on the decrease of the total concentration and on the bioavailable forms of above-mentioned pollutants but also on the changes that had taken place in chemical and geotechnical properties of the treated soil.

Assessment of soil-gas and soil contamination at the Old Metal Workshop Hog Farm Area, Fort Gordon, Georgia, 2009-2010

USGS Publications Warehouse

Caldwell, Andral W.; Falls, W. Fred; Guimaraes, Wladmir B.; Ratliff, W. Hagan; Wellborn, John B.; Landmeyer, James E.

2011-01-01

Soil gas and soil were assessed for contaminants at the Old Metal Workshop Hog Farm Area at Fort Gordon, Georgia, from October 2009 to September 2010. The assessment included delineating organic contaminants present in soil-gas and inorganic contaminants present in soil samples collected from the area estimated to be the Old Metal Workshop Hog Farm Area. This assessment was conducted to provide environmental contamination data to Fort Gordon personnel pursuant to requirements for the Resource Conservation and Recovery Act Part B Hazardous Waste Permit process. All soil-gas samplers contained total petroleum hydrocarbons above the method detection level. The highest total petroleum hydrocarbon mass detected was 121.32 micrograms in a soil-gas sampler from the western corner of the Old Metal Workshop Hog Farm Area along Sawmill Road. The highest undecane mass detected was 73.28 micrograms at the same location as the highest total petroleum hydrocarbon mass. Some soil-gas samplers detected toluene mass greater than the method detection level of 0.02 microgram; the highest detection of toluene mass was 0.07 microgram. Some soil-gas samplers were installed in areas of high-contaminant mass to assess for explosives and chemical agents. Explosives or chemical agents were not detected above their respective method detection levels for all soil-gas samplers installed. Inorganic concentrations in five soil samples collected did not exceed regional screening levels established by the U.S. Environmental Protection Agency. Barium concentrations, however, were up to eight times higher than the background concentrations reported in similar Coastal Plain sediments of South Carolina.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

This volume contains the interim change notice for sample preparation methods. Covered are: acid digestion for metals analysis, fusion of Hanford tank waste solids, water leach of sludges/soils/other solids, extraction procedure toxicity (simulate leach in landfill), sample preparation for gamma spectroscopy, acid digestion for radiochemical analysis, leach preparation of solids for free cyanide analysis, aqueous leach of solids for anion analysis, microwave digestion of glasses and slurries for ICP/MS, toxicity characteristic leaching extraction for inorganics, leach/dissolution of activated metal for radiochemical analysis, extraction of single-shell tank (SST) samples for semi-VOC analysis, preparation and cleanup of hydrocarbon- containing samples for VOCmore » and semi-VOC analysis, receiving of waste tank samples in onsite transfer cask, receipt and inspection of SST samples, receipt and extrusion of core samples at 325A shielded facility, cleaning and shipping of waste tank samplers, homogenization of solutions/slurries/sludges, and test sample preparation for bioassay quality control program.« less

Lead shot incidence on a New Mexico public hunting area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schranck, B.W.; Dollahon, G.R.

The incidence of lead shot was investigated on a 20.2-ha (50-acre) seasonal marsh used for waterfowl hunting at the Bitter Lake National Wildlife Refuge, Roswell, New Mexico. Of the 162 soil samples taken randomly, 59% contained 1 to 5 lead shot. A minimum lead shot incidence of 98,985 shot per ha (40,075 per acre) was calculated. More shot was found in firm than in mucky soils. Management recommendations to limit waterfowl exposure to lead ingestion are offered.

Genome Sequence of an Ammonia-Oxidizing Soil Archaeon, “Candidatus Nitrosoarchaeum koreensis” MY1

PubMed Central

Kim, Byung Kwon; Jung, Man-Young; Yu, Dong Su; Park, Soo-Je; Oh, Tae Kwang; Rhee, Sung-Keun; Kim, Jihyun F.

2011-01-01

Ammonia-oxidizing archaea are ubiquitous microorganisms which play important roles in global nitrogen and carbon cycle on earth. Here we present the high-quality draft genome sequence of an ammonia-oxidizing archaeon, “Candidatus Nitrosopumilus koreensis” MY1, that dominated an enrichment culture of a soil sample from the rhizosphere. Its genome contains genes for survival in the rhizosphere environment as well as those for carbon fixation and ammonium oxidation to nitrite. PMID:21914867

Landscapes to riverscapes: bridging the gap between research and conservation of stream fishes

USGS Publications Warehouse

Fausch, Kurt D.; Torgersen, Christian E.; Baxter, Colden V.; Li, Hiram W.

2002-01-01

Woodcock (Philohela minor), earthworms, and soil samples were collected from January-March 1965, from fields in southeastern Louisiana approximately 3 years after discontinuance of areal treatments with heptachlor in this region. Heptachlor epoxide residues in woodcock averaged 0.42 ppm (dry weight), conspicuously lower than in 1961 and 1962. Residues of DDE in woodcock averaged 3.62 pprn, higher than in birds taken in the same area in 1961-62. Earthworms and soils contained traces of several organochlorine pesticides.

Apollo rocks, fines and soil cores

NASA Astrophysics Data System (ADS)

Allton, J.; Bevill, T.

Apollo rocks and soils not only established basic lunar properties and ground truth for global remote sensing, they also provided important lessons for planetary protection (Adv. Space Res ., 1998, v. 22, no. 3 pp. 373-382). The six Apollo missions returned 2196 samples weighing 381.7 kg, comprised of rocks, fines, soil cores and 2 gas samples. By examining which samples were allocated for scientific investigations, information was obtained on usefulness of sampling strategy, sampling devices and containers, sample types and diversity, and on size of sample needed by various disciplines. Diversity was increased by using rakes to gather small rocks on the Moon and by removing fragments >1 mm from soils by sieving in the laboratory. Breccias and soil cores are diverse internally. Per unit weight these samples were more often allocated for research. Apollo investigators became adept at wringing information from very small sample sizes. By pushing the analytical limits, the main concern was adequate size for representative sampling. Typical allocations for trace element analyses were 750 mg for rocks, 300 mg for fines and 70 mg for core subsamples. Age-dating and isotope systematics allocations were typically 1 g for rocks and fines, but only 10% of that amount for core depth subsamples. Historically, allocations for organics and microbiology were 4 g (10% for cores). Modern allocations for biomarker detection are 100mg. Other disciplines supported have been cosmogenic nuclides, rock and soil petrology, sedimentary volatiles, reflectance, magnetics, and biohazard studies . Highly applicable to future sample return missions was the Apollo experience with organic contamination, estimated to be from 1 to 5 ng/g sample for Apollo 11 (Simonheit &Flory, 1970; Apollo 11, 12 &13 Organic contamination Monitoring History, U.C. Berkeley; Burlingame et al., 1970, Apollo 11 LSC , pp. 1779-1792). Eleven sources of contaminants, of which 7 are applicable to robotic missions, were identified and reduced; thus, improving Apollo 12 samples to 0.1 ng/g. Apollo sample documentation preserves the parentage, orientation, and location, packaging, handling and environmental histories of each of the 90,000 subsamples currently curated. Active research on Apollo samples continues today, and because 80% by weight of the Apollo collection remains pristine, researchers have a reservoir of material to support studies well into the future.

A High Resolution Microprobe Study of EETA79001 Lithology C

NASA Technical Reports Server (NTRS)

Schrader, Christian M.; Cohen, B. A.; Donovan, J. J.; Vicenzi, E. P.

2010-01-01

Antarctic meteorite EETA79001 has received substantial attention for possibly containing a component of Martian soil in its impact glass (Lithology C) [1]. The composition of Martian soil can illuminate near-surface processes such as impact gardening [2] and hydrothermal and volcanic activity [3,4]. Impact melts in meteorites represent our most direct samples of Martian regolith. We present the initial findings from a high-resolution electron microprobe study of Lithology C from Martian meteorite EETA79001. As this study develops we aim to extract details of a potential soil composition and to examine Martian surface processes using elemental ratios and correlations.

Thermoradiation inactivation of naturally occurring organisms in soil

NASA Technical Reports Server (NTRS)

Reynolds, M. C.; Lindell, K. F.; David, T. J.

1973-01-01

Samples of soil collected from Kennedy Space Center near spacecraft assembly facilities were found to contain microorganisms very resistant to conventional sterilization techniques. The inactivation behavior of the naturally occurring spores in soil was investigated using dry heat and ionizing radiation, first separately, then in combination. Dry heat inactivation rates of spores were determined for 105 and 125 C. Radiation inactivation rates were determined for dose rates of 660 and 76 krad/hr at 25 C. Simultaneous combinations of heat and radiation were then investigated at 105, 110, 115, 120, and 125 C. Combined treatment was found to be highly synergistic requiring greatly reduced radiation doses to accomplish sterilization.

Decontamination of soil containing POPs by the combined action of solid Fenton-like reagents and microwaves.

PubMed

Cravotto, Giancarlo; Di Carlo, Stefano; Ondruschka, Bernd; Tumiatti, Vander; Roggero, Carlo Maria

2007-10-01

The effect on halogenated aromatics of solid, non-toxic oxidants such as sodium percarbonate and the urea/hydrogen peroxide complex (Fenton-like reagents) was investigated. A microwaves-assisted, solvent-free method for soil decontamination is presented. It marks a considerable advance in the search of more efficient, environment-friendly procedures for the degradative oxidation of persistent organic pollutants. Residual pollutants in treated soil samples were determined by GC/MS analysis after solvent extraction or direct thermal desorption. Results showed that 4-chloronaphthol, 2,4-dichlorophenoxyacetic acid and p-nonylphenol had been degraded completely, 2,4-dibromophenol to a large extent.

Laboratory and exterior decay of wood plastic composite boards: voids analysis and computed tomography

Treesearch

Grace Sun; Rebecca E. Ibach; Meghan Faillace; Marek Gnatowski; Jessie A. Glaeser; John Haight

2016-01-01

After exposure in the field and laboratory soil block culture testing, the void content of wood–plastic composite (WPC) decking boards was compared to unexposed samples. A void volume analysis was conducted based on calculations of sample density and from micro-computed tomography (microCT) data. It was found that reference WPC contains voids of different sizes from...

Seeds in the Organic Layers and Soil of Four Beech-Birch-Maple Stands

Treesearch

Raymond E. Graber; Donald F. Thompson

1978-01-01

Forest floor samples were collected in northern hardwood stands 5, 38, 95, and 200+ years old. The seeds contained in these samples were germinated in a greenhouse. Thirty-five species of herbs, shrubs, and trees were identified. The largest number of species, 23, were from the 5-year-old stand. The oldest stand had the fewest species, 17. Rubus and...

The dynamics of mercury near Idrija mercury mine, Slovenia: Horizontal and vertical distributions of total, methyl, and ethyl mercury concentrations in soils.

PubMed

Tomiyasu, Takashi; Kodamatani, Hitoshi; Imura, Ryusuke; Matsuyama, Akito; Miyamoto, Junko; Akagi, Hirokatsu; Kocman, David; Kotnik, Jože; Fajon, Vesna; Horvat, Milena

2017-10-01

The distributions of the total mercury (T-Hg), methylmercury (MeHg), and ethylmercury (EtHg) concentrations in soil and their relationship to chemical composition of the soil and total organic carbon content (TOC, %) were investigated. Core samples were collected from hill slope on the right and left riverbanks of the Idrija River. Former smelting plant is located on the right bank. The T-Hg average in each of the core samples ranged from 0.25 to 1650 mg kg -1 . The vertical T-Hg variations in the samples from the left bank showed no significant change with depth. Conversely, the T-Hg varied with depth, with the surface, or layers several centimeters from the surface, tending to show the highest values in the samples from the right bank. Since the right and left bank soils have different chemical compositions, different pathways of mercury delivery into soils were suggested. The MeHg and EtHg concentrations ranged from n.d. (not detected) to 444 μg kg -1 and n.d. to 17.4 μg kg -1 , respectively. The vertical variations of MeHg and EtHg were similar to those of TOC, except for the near-surface layers containing TOC greater than 20%. These results suggest that the decomposition of organic matter is closely related to organic mercury formation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Redistribution of soil nitrogen, carbon and organic matter by mechanical disturbance during whole-tree harvesting in northern hardwoods

USGS Publications Warehouse

Ryan, D.F.; Huntington, T.G.; Wayne, Martin C.

1992-01-01

To investigate whether mechanical mixing during harvesting could account for losses observed from forest floor, we measured surface disturbance on a 22 ha watershed that was whole-tree harvested. Surface soil on each 10 cm interval along 81, randomly placed transects was classified immediately after harvesting as mineral or organic, and as undisturbed, depressed, rutted, mounded, scarified, or scalped (forest floor scraped away). We quantitatively sampled these surface categories to collect soil in which preharvest forest floor might reside after harvest. Mechanically mixed mineral and organic soil horizons were readily identified. Buried forest floor under mixed mineral soil occurred in 57% of mounds with mineral surface soil. Harvesting disturbed 65% of the watershed surface and removed forest floor from 25% of the area. Mechanically mixed soil under ruts with organic or mineral surface soil, and mounds with mineral surface soil contained organic carbon and nitrogen pools significantly greater than undisturbed forest floor. Mechanical mixing into underlying mineral soil could account for the loss of forest floor observed between the preharvest condition and the second growing season after whole-tree harvesting. ?? 1992.

[Effects of different fertilization treatments on soil humic acid structure characteristics].

PubMed

Zhao, Nan; Lü, Yi-Zhong

2012-07-01

The present article used soil humic acid as research object to study effects on the structure characteristics of soil humic acid under the condition of applying cake fertilizer, green manure, straw fertilizer with the same contents of nitrogen and phosphorus. It used element analysis, micro infrared, and solid 13C-NMR for structure analysis, the results indicated that: The chemical composition and structure characteristics of humic acids were similar, but they also had many obvious differences. (1) The atomic ratios of H/C, O/C, and C/N were all different for the humic acids, the soil humic acid of cake fertilizer processing had the highest contents of H and N, green manure processing of soil humic acid contained the highest content of O, while straw fertilizer processing of soil humic acid contained highest content of C. (2) Infrared analysis displayed that the three soil humic acids contained protein Cake fertilizer processing of soil humic acid contained the most amino compounds, green manure processing of soil humic acid contained the maximum contents of hydroxyl and aliphatic hydrocarbon, while straw fertilizer processing of soil humic acid contained the highest contents of alcohol and phenol. (3) Solid 13C-NMR data indicated that cake fertilizer processing of soil humic acid contained the most carboxyl carbon, green manure processing of soil humic acid contained the highest contents of alkyl carbon and carbonyl carbon, while straw fertilizer processing of soil humic acids had the most alkoxy carbon and aromatic carbon

Size-fractionation and characterization of landfill leachate and the improvement of Cu{sup 2+} adsorption capacity in soil and aged refuse

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lou Ziyang; State Key Laboratory of Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Tongji University, Shanghai 200092; Chai Xiaoli

2009-01-15

Leachate was collected from an anaerobic lagoon at Shanghai Laogang refuse landfill, the largest landfill in China, and the sample was separated into six fractions using micro-filtration membranes, followed by ultra-filtration membranes. Several parameters of the samples were measured, including chemical oxygen demand (COD), total organic carbon (TOC), total solids (TS), pH, total phosphate (TP), total nitrogen (TN), fixed solids (FS), NH{sub 4}{sup +}, orthophosphate, color, turbidity, and conductivity. These parameters were then quantitatively correlated with the molecular weight cutoff of the membrane used. Organic matter in the dissolved fraction (MW < 1 kDa) predominated in the leachate, accounting formore » 65% of TOC. Thermal infrared spectroscopy was used to characterize the filter residues. Asymmetric and symmetric stretching of methyl and methylene groups, and of functional groups containing nitrogen and oxygen atoms, were observed. In addition, the ability of two different samples to adsorb heavy metals was tested. Cu{sup 2+} was chosen as the representative heavy metal in this study, and the samples were soil; aged refuse, which had spent 8 years in a conventional sanitary landfill; and samples of soil and aged refuse treated for 48 h with leachate in the ratio of 5 g of sample per 50 ml of leachate. Cu{sup 2+} uptake by the raw soil was {approx}4.60 {mu}g/g, while uptake by the leachate-contacted soil and leachate-contacted aged refuse were 5.66 and 5.11 {mu}g/g, respectively. These results show that the organic matter in the leachate enhanced the capacity of aqueous solutions to adsorb Cu{sup 2+}.« less

Influences of sampling size and pattern on the uncertainty of correlation estimation between soil water content and its influencing factors

NASA Astrophysics Data System (ADS)

Lai, Xiaoming; Zhu, Qing; Zhou, Zhiwen; Liao, Kaihua

2017-12-01

In this study, seven random combination sampling strategies were applied to investigate the uncertainties in estimating the hillslope mean soil water content (SWC) and correlation coefficients between the SWC and soil/terrain properties on a tea + bamboo hillslope. One of the sampling strategies is the global random sampling and the other six are the stratified random sampling on the top, middle, toe, top + mid, top + toe and mid + toe slope positions. When each sampling strategy was applied, sample sizes were gradually reduced and each sampling size contained 3000 replicates. Under each sampling size of each sampling strategy, the relative errors (REs) and coefficients of variation (CVs) of the estimated hillslope mean SWC and correlation coefficients between the SWC and soil/terrain properties were calculated to quantify the accuracy and uncertainty. The results showed that the uncertainty of the estimations decreased as the sampling size increasing. However, larger sample sizes were required to reduce the uncertainty in correlation coefficient estimation than in hillslope mean SWC estimation. Under global random sampling, 12 randomly sampled sites on this hillslope were adequate to estimate the hillslope mean SWC with RE and CV ≤10%. However, at least 72 randomly sampled sites were needed to ensure the estimated correlation coefficients with REs and CVs ≤10%. Comparing with all sampling strategies, reducing sampling sites on the middle slope had the least influence on the estimation of hillslope mean SWC and correlation coefficients. Under this strategy, 60 sites (10 on the middle slope and 50 on the top and toe slopes) were enough to ensure the estimated correlation coefficients with REs and CVs ≤10%. This suggested that when designing the SWC sampling, the proportion of sites on the middle slope can be reduced to 16.7% of the total number of sites. Findings of this study will be useful for the optimal SWC sampling design.

Deep horizons: Soil Carbon sequestration and storage potential in grassland soils

NASA Astrophysics Data System (ADS)

Torres-Sallan, Gemma; Schulte, Rogier; Lanigan, Gary J.; Byrne, Kenneth A.; Reidy, Brian; Creamer, Rachel

2016-04-01

Soil Organic Carbon (SOC) enhances soil fertility, holding nutrients in a plant-available form. It also improves aeration and water infiltration. Soils are considered a vital pool for C (Carbon) sequestration, as they are the largest pool of C after the oceans, and contain 3.5 more C than the atmosphere. SOC models and inventories tend to focus on the top 30 cm of soils, only analysing total SOC values. Association of C with microaggregates (53-250 μm) and silt and clay (<53 μm) is considered C sequestration as these fractions offer the greatest protection against mineralization. This study assessed the role of aggregation in C sequestration throughout the profile, down to 1 m depth, of 30 grassland sites divided in 6 soil types. One kg sample was collected for each horizon, sieved at 8 mm and dried at 40 °C. Through a wet sieving procedure, four aggregate sizes were isolated: large macroaggregates (>2000 μm); macroaggregates (250-2000 μm); microaggregates and silt & clay. Organic C associated to each aggregate fraction was analysed on a LECO combustion analyser. Sand-free C was calculated for each aggregate size. For all soil types, 84% of the SOC located in the first 30 cm was contained inside macroaggregates and large macroaggregates. Given that this fraction has a turnover time of 1 to 10 years, sampling at that depth only provides information on the labile fraction in soil, and does not consider the longer term C sequestration potential. Only when looking at the whole profile, two clear trends could be observed: 1) soils with a clay increase at depth had most of their C located in the silt and clay fractions, which indicate their enhanced C sequestration capacity, 2) free-draining soils had a bigger part of their SOC located in the macroaggregate fractions. These results indicate that current C inventories and models that focus on the top 30 cm, do not accurately measure soil C sequestration potential in soils, but rather the more labile fraction. However, at depth soil forming processes have been identified as a major factor influencing C sequestration potential in soils. This has a major impact in further quantifying and sustaining C sequestration into the future. Soils with a high sequestration potential at depth need to be managed to enhance the residence time to contribute to future off-setting of greenhouse gas emissions.

Mobility of selected trace elements in Mediterranean red soil amended with phosphogypsum: experimental study.

PubMed

Kassir, Lina Nafeh; Darwish, Talal; Shaban, Amin; Ouaini, Naim

2012-07-01

Soil amendment by phosphogypsum (PG) application becomes of increasing importance in agriculture. This may lead, however, to soil, plant, and groundwater contamination with trace elements (TEs) inherently present in PG. Monitoring of selected TEs (Pb, Zn, Cu, and Cd) distribution and mobility in a Mediterranean red soil profile has been performed in soil parcels applied with PG over a 16-month period. Concentrations were measured in soil and plant samples collected from various depth intervals at different points in time. TEs sequential extraction was performed on soil and PG samples. Results showed soil profile enrichment peaked 5 months after PG application for Cd, and 12 months for Pb, Zn, and Cu. Rainwater, pH, total organic carbon, and cationic exchange capacity were the main controlling factors in TEs accumulation in soils. Cd was transferred to a soil depth of about 20 cm. Zn exhibited mobility towards deeper layers. Pb and Cu were accumulated in around 20-55-cm-deep layers. PG increased the solubility of the studied TEs; PG-applied soils contained TEs bound to exchangeable and acid-soluble fractions in higher percentages than reference soil. Pb, Zn, and Cu were sorbed into mineral soil phases, while Cd was mainly found in the exchangeable (bio-available) form. The order of TEs decreasing mobility was Zn > Cd > Pb > Cu. Roots and leaves of existed plants, Cichorium intybus L., accumulated high concentrations of Cd (1-2.4 mg/kg), exceeding recommended tolerable levels, and thus signifying potential health threats through contaminated crops. It was therefore recommended that PG should be applied in carefully established, monitored, and controlled quantities to agricultural soils.

Rapid Method of Determining Factors Limiting Bacterial Growth in Soil

PubMed Central

Aldén, L.; Demoling, F.; Bååth, E.

2001-01-01

A technique to determine which nutrients limit bacterial growth in soil was developed. The method was based on measuring the thymidine incorporation rate of bacteria after the addition of C, N, and P in different combinations to soil samples. First, the thymidine incorporation method was tested in two different soils: an agricultural soil and a forest humus soil. Carbon (as glucose) was found to be the limiting substance for bacterial growth in both of these soils. The effect of adding different amounts of nutrients was studied, and tests were performed to determine whether the additions affected the soil pH and subsequent bacterial activity. The incubation time required to detect bacterial growth after adding substrate to the soil was also evaluated. Second, the method was used in experiments in which three different size fractions of straw (1 to 2, 0.25 to 1, and <0.25 mm) were mixed into the agricultural soil in order to induce N limitation for bacterial growth. When the straw fraction was small enough (<0.25 mm), N became the limiting nutrient for bacterial growth after about 3 weeks. After the addition of the larger straw fractions (1 to 2 and 0.25 to 1 mm), the soil bacteria were C limited throughout the incubation period (10 weeks), although an increase in the thymidine incorporation rate after the addition of C and N together compared with adding them separately was seen in the sample containing the size fraction from 0.25 to 1 mm. Third, soils from high-pH, limestone-rich areas were examined. P limitation was observed in one of these soils, while tendencies toward P limitation were seen in some of the other soils. PMID:11282640

Effects of X-Ray Dose On Rhizosphere Studies Using X-Ray Computed Tomography

PubMed Central

Zappala, Susan; Helliwell, Jonathan R.; Tracy, Saoirse R.; Mairhofer, Stefan; Sturrock, Craig J.; Pridmore, Tony; Bennett, Malcolm; Mooney, Sacha J.

2013-01-01

X-ray Computed Tomography (CT) is a non-destructive imaging technique originally designed for diagnostic medicine, which was adopted for rhizosphere and soil science applications in the early 1980s. X-ray CT enables researchers to simultaneously visualise and quantify the heterogeneous soil matrix of mineral grains, organic matter, air-filled pores and water-filled pores. Additionally, X-ray CT allows visualisation of plant roots in situ without the need for traditional invasive methods such as root washing. However, one routinely unreported aspect of X-ray CT is the potential effect of X-ray dose on the soil-borne microorganisms and plants in rhizosphere investigations. Here we aimed to i) highlight the need for more consistent reporting of X-ray CT parameters for dose to sample, ii) to provide an overview of previously reported impacts of X-rays on soil microorganisms and plant roots and iii) present new data investigating the response of plant roots and microbial communities to X-ray exposure. Fewer than 5% of the 126 publications included in the literature review contained sufficient information to calculate dose and only 2.4% of the publications explicitly state an estimate of dose received by each sample. We conducted a study involving rice roots growing in soil, observing no significant difference between the numbers of root tips, root volume and total root length in scanned versus unscanned samples. In parallel, a soil microbe experiment scanning samples over a total of 24 weeks observed no significant difference between the scanned and unscanned microbial biomass values. We conclude from the literature review and our own experiments that X-ray CT does not impact plant growth or soil microbial populations when employing a low level of dose (<30 Gy). However, the call for higher throughput X-ray CT means that doses that biological samples receive are likely to increase and thus should be closely monitored. PMID:23840640

Defluorination of Sodium Fluoroacetate by Bacteria from Soil and Plants in Brazil

PubMed Central

Camboim, Expedito K. A.; Tadra-Sfeir, Michelle Z.; de Souza, Emanuel M.; Pedrosa, Fabio de O.; Andrade, Paulo P.; McSweeney, Chris S.; Riet-Correa, Franklin; Melo, Marcia A.

2012-01-01

The aim of this work was to isolate and identify bacteria able to degrade sodium fluoroacetate from soil and plant samples collected in areas where the fluoroacetate-containing plants Mascagnia rigida and Palicourea aenofusca are found. The samples were cultivated in mineral medium added with 20 mmol L−1 sodium fluoroacetate. Seven isolates were identified by 16S rRNA gene sequencing as Paenibacillus sp. (ECPB01), Burkholderia sp. (ECPB02), Cupriavidus sp. (ECPB03), Staphylococcus sp. (ECPB04), Ancylobacter sp. (ECPB05), Ralstonia sp. (ECPB06), and Stenotrophomonas sp. (ECPB07). All seven isolates degraded sodium-fluoroacetate-containing in the medium, reaching defluorination rate of fluoride ion of 20 mmol L−1. Six of them are reported for the first time as able to degrade sodium fluoroacetate (SF). In the future, some of these microorganisms can be used to establish in the rumen an engineered bacterial population able to degrade sodium fluoroacetate and protect ruminants from the poisoning by this compound. PMID:22619595

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

The Adrian Municipal Well Field is listed on the National Priorities List. Adrian is located in Nobles County which is in southwestern Minnesota. In September 1983, 1,2-dichloroethane (1,2-DCA), a volatile organic compound (VOC), was detected in Municipal Wells 3 and 4. Subsequent sampling in January 1984 indicated increased levels of VOC contamination in Wells 3 and 4. In these sampling events, a number of VOCs were detected. Source identification has also focused on a number of underground storage tanks (USTs) used to store gasoline and fuel oil. Twelve contaminants have been identified in ground water from the surficial aquifer. Subsurfacemore » soil contamination has also been detected. A Soil Organic Vapor survey measured both total ionizable hydrocarbons and the gasoline constituents benzene, toluene, and total xylenes at 2-3 feet feet above the water table. Because of the high concentrations of gasoline contaminants in the soil and ground water at the site, there exists the potential for combustion or explosion if gasoline vapors migrate from these media into nearby businesses or homes. Several of the USTs contained or did contain fuel oil. Fuel oil contains semi-volatile constituents (e.g., polynuclear aromatic hydrocarbons, etc.) not found in gasoline. Based on the available information, the site is considered to be of potential public health concern because of the risk to human health caused by the possibility of exposure to hazardous substances via ground water, and potentially surface water, air, and biota.« less

Identification of Burkholderia pseudomallei Near-Neighbor Species in the Northern Territory of Australia

PubMed Central

Ginther, Jennifer L.; Mayo, Mark; Warrington, Stephanie D.; Kaestli, Mirjam; Mullins, Travis; Wagner, David M.; Currie, Bart J.; Tuanyok, Apichai; Keim, Paul

2015-01-01

Identification and characterization of near-neighbor species are critical to the development of robust molecular diagnostic tools for biothreat agents. One such agent, Burkholderia pseudomallei, a soil bacterium and the causative agent of melioidosis, is lacking in this area because of its genomic diversity and widespread geographic distribution. The Burkholderia genus contains over 60 species and occupies a large range of environments including soil, plants, rhizospheres, water, animals and humans. The identification of novel species in new locations necessitates the need to identify the true global distribution of Burkholderia species, especially the members that are closely related to B. pseudomallei. In our current study, we used the Burkholderia-specific recA sequencing assay to analyze environmental samples from the Darwin region in the Northern Territory of Australia where melioidosis is endemic. Burkholderia recA PCR negative samples were further characterized using 16s rRNA sequencing for species identification. Phylogenetic analysis demonstrated that over 70% of the bacterial isolates were identified as B. ubonensis indicating that this species is common in the soil where B. pseudomallei is endemic. Bayesian phylogenetic analysis reveals many novel branches within the B. cepacia complex, one novel B. oklahomensis-like species, and one novel branch containing one isolate that is distinct from all other samples on the phylogenetic tree. During the analysis with recA sequencing, we discovered 2 single nucleotide polymorphisms in the reverse priming region of B. oklahomensis. A degenerate primer was developed and is proposed for future use. We conclude that the recA sequencing technique is an effective tool to classify Burkholderia and identify soil organisms in a melioidosis endemic area. PMID:26121041

Ecotoxicological Assessment of Immersion Samples from Façade Render Containing Free or Encapsulated Biocides.

PubMed

Vermeirssen, Etiënne L M; Campiche, Sophie; Dietschweiler, Conrad; Werner, Inge; Burkhardt, Michael

2018-05-22

To protect house façades from fouling by microorganisms, biocides can be added to a render or paint before it is applied. During driving rain events, these biocides gradually leach out and have the potential to pollute soil or aquatic ecosystems. We studied the leaching behaviour of biocides and toxicity of leachates from renders with either free or encapsulated biocides. Both render types contained equal amounts of terbutryn, 2-octyl-3(2H)-isothiazolinone (OIT) and 4,5-dichloro-2-n-octyl-4-isothiazolino-3-one (DCOIT). Leachate samples were generated over nine immersion cycles according to a European standard and biocides were quantified. The first and ninth samples were tested using bioassays with algae, bacteria and water flea, the first sample with earthworms and springtails. Encapsulation reduced leaching of terbutryn, OIT and DCOIT four-, 17-, and 27-fold. For aquatic organisms, the toxicity of water from render containing encapsulated biocides was always lower than that of render with free biocides. Furthermore, toxicity decreased four- to five-fold over the nine immersion cycles. Inhibition of photosynthesis was the most sensitive endpoint, followed by algal growth rate, bacterial bioluminescence and water flea reproduction. Toxicity to algae was explained by terbutryn and toxicity to bacteria by OIT. None of the samples affected soil organisms. Results demonstrate that combining standardised leaching tests with standardised bioassays is a promising approach to evaluate the ecotoxicity of biocides that leach from façade renders. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Near infrared spectra are more sensitive to land use changes than physical, chemical and biological soil properties

NASA Astrophysics Data System (ADS)

Guerrero, C.; Zornoza, R.; Mataix-Solera, J.; Mataix-Beneyto, J.; Scow, K.

2009-04-01

We studied the sensibility of the near infrared spectra (NIR) of soils to the changes caused by land use, and we compared with the sensibility of different sets of physical, chemical and biological soil properties. For this purpose, we selected three land uses, constituted by forest, almond trees orchards, and orchards abandoned between 10 and 15 years previously to sampling. Sampling was carried out in four different locations from the province of Alicante (SE Spain). We used discriminant analysis (DA) using different sets of soil properties. The different sets tested in this study using DA were: (1) physical and chemical properties (organic carbon, total nitrogen, available phosphorus, pH, electrical conductivity, cation exchange capacity, aggregate stability, water holding capacity, and available Ca, Mg, K and Na), (2) biochemical properties (microbial biomass carbon, basal respiration and urease, phosphatase and β-glucosidase activities), (3) phospholipids fatty acids (PLFAs), (4) physical, chemical and biochemical properties (all properties of the previous sets), and (5) the NIR spectra of soils (scores of the principal components). In general, all sets of properties were sensible to land use. This was observed in the DAs by the separation (more or less clear) of samples in groups defined by land use (irrespective of site). The worst results were obtained using soil physical and chemical properties. The combination of physical, chemical and biological properties enhanced the separation of samples in groups, indicating higher sensibility. It is accepted than combination of properties of different nature is more effective to evaluate the soil quality. The microbial community structure (PLFAs) was highly sensible to the land use, grouping correctly the 100% of the samples according with the land use. The NIR spectra were also sensitive to land use. The scores of the first 5 components, which explained 99.97% of the variance, grouped correctly the 85% of the soil samples by land use, but were unable to group correctly the 100% of the samples. Surprisingly, when the scarce variance presents in components 5 to 40 was also used, the 100% of the samples were grouped by land use, as it was observed with PLFAs. But PLFAs analysis is expensive and time-consuming (some weeks). In contrast, only some minutes are needed for the obtainment of the NIR spectra. Additionally, no chemicals are need, decreasing the costs. The NIR spectrum of a soil contains relevant information about physical, chemical and biochemical properties. NIR spectrum could be considered as an integrated vision of soil quality, and as consequence offers an integrated vision of perturbations. Thus, NIR spectroscopy could be used as tool to monitoring soil quality in large areas. Acknowledgements: Authors acknowledge to "Bancaja-UMH" for the financial support of the project "NIRPRO"

Could saponins be used to enhance bioremediation of polycyclic aromatic hydrocarbons in aged-contaminated soils?

PubMed

Davin, Marie; Starren, Amandine; Deleu, Magali; Lognay, Georges; Colinet, Gilles; Fauconnier, Marie-Laure

2018-03-01

Polycyclic aromatic hydrocarbons (PAH) are persistent organic compounds of major concern that tend to accumulate in the environment, threatening ecosystems and health. Brownfields represent an important tank for PAHs and require remediation. Researches to develop bioremediation and phytoremediation techniques are being conducted as alternatives to environmentally aggressive, expensive and often disruptive soil remediation strategies. The objectives of the present study were to investigate the potential of saponins (natural surfactants) as extracting agents and as bioremediation enhancers on an aged-contaminated soil. Two experiments were conducted on a brownfield soil containing 15 PAHs. In a first experiment, soil samples were extracted with saponins solutions (0; 1; 2; 4 and 8 g.L -1 ). In a second experiment conducted in microcosms (28 °C), soil samples were incubated for 14 or 28 days in presence of saponins (0; 2.5 and 5 mg g -1 ). CO 2 emissions were monitored throughout the experiment. After the incubation, dehydrogenase activity was measured as an indicator of microbiological activity and residual PAHs were determined. In both experiments PAHs were determined using High-Performance Liquid Chromatography and Fluorimetric Detection. The 4 g.L -1 saponins solution extracted significantly more acenaphtene, fluorene, phenanthrene, anthracene, and pyrene than water. PAHs remediation was not enhanced in presence of saponins compared to control samples after 28 days. However CO 2 emissions and dehydrogenase activities were significantly more important in presence of saponins, suggesting no toxic effect of these surfactants towards soil microbiota. Copyright © 2017 Elsevier Ltd. All rights reserved.

Toward a simple, repeatable, non-destructive approach to measuring stable-isotope ratios of water within tree stems

NASA Astrophysics Data System (ADS)

Raulerson, S.; Volkmann, T.; Pangle, L. A.

2017-12-01

Traditional methodologies for measuring ratios of stable isotopes within the xylem water of trees involve destructive coring of the stem. A recent approach involves permanently installed probes within the stem, and an on-site assembly of pumps, switching valves, gas lines, and climate-controlled structure for field deployment of a laser spectrometer. The former method limits the possible temporal resolution of sampling, and sample size, while the latter may not be feasible for many research groups. We present results from initial laboratory efforts towards developing a non-destructive, temporally-resolved technique for measuring stable isotope ratios within the xylem flow of trees. Researchers have used direct liquid-vapor equilibration as a method to measure isotope ratios of the water in soil pores. Typically, this is done by placing soil samples in a fixed container, and allowing the liquid water within the soil to come into isotopic equilibrium with the headspace of the container. Water can also be removed via cryogenic distillation or azeotropic distillation, with the resulting liquid tested for isotope ratios. Alternatively, the isotope ratios of the water vapor can be directly measured using a laser-based water vapor isotope analyzer. Well-established fractionation factors and the isotope ratios in the vapor phase are then used to calculate the isotope ratios in the liquid phase. We propose a setup which would install a single, removable chamber onto a tree, where vapor samples could non-destructively and repeatedly be taken. These vapor samples will be injected into a laser-based isotope analyzer by a recirculating gas conveyance system. A major part of what is presented here is in the procedure of taking vapor samples at 100% relative humidity, appropriately diluting them with completely dry N2 calibration gas, and injecting them into the gas conveyance system without inducing fractionation in the process. This methodology will be helpful in making temporally resolved measurements of the stable isotopes in xylem water, using a setup that can be easily repeated by other research groups. The method is anticipated to find broad application in ecohydrological analyses, and in tracer studies aimed at quantifying age distributions of soil water extracted by plant roots.

The IRHUM database - bioavailable strontium isotope ratios of France for geochemical fingerprinting

NASA Astrophysics Data System (ADS)

Willmes, Malte; Moffat, Ian; Grün, Rainer; Armstrong, Richard; Kinsley, Les; McMorrow, Linda

2013-04-01

Strontium isotope ratios (87Sr/86Sr) are used as a geochemical tracer in a wide range of fields including archaeology, ecology, soil, food and forensic sciences. These applications are based on the principle that strontium isotopic ratios of materials reflect the geological sources of the strontium, which were available during its formation. Geologic regions with distinct strontium isotope ranges, which depend on their age and composition, can be differentiated. A major constraint for current studies is the lack of robust reference maps to evaluate the strontium isotope ratios measured in the samples. The aim of the IRHUM (isotopic reconstruction of human migration) database is to provide a reference map of bioavailable strontium isotope ratios for continental France. The current dataset contains 400 sample locations covering the major geologic units of the Paris and Aquitaine Basin, the Massif Central, and the Pyrenees. At each site soil and plant samples have been collected to cover the whole range of strontium ratios at a specific location. The database is available online at www.rses.anu.edu.au/research-areas/archaeogeochemistry and contains the bioavailable strontium isotope data as well as major and trace element concentrations for soil and plant samples. Strontium isotopes were analysed using a Neptune multi-collector inductively-coupled plasma mass spectrometer (MC-ICP-MS) and elemental concentrations with a Varian Vista Pro Axial ICP-AES (inductively-coupled plasma atomic emission spectrometer). In addition, IRHUM provides spatial context for each sample, including background geology, field observations and soil descriptions. This metadata allows users to evaluate the suitability of a specific data point for their study. The IRHUM database fills an important gap between high resolution studies from specific sites (e.g. archaeological sites), to the very broad geochemical mapping of Europe. Thus it provides an excellent tool to evaluate the regional context of a sample and complement more closed spaced studies. New results will be added to the database continuously with the aim of covering all major geologic units of France within the next year.

Mechanical environmental transport of actinides and ¹³⁷Cs from an arid radioactive waste disposal site

DOE PAGES

Snow, Mathew S.; Clark, Sue B.; Morrison, Samuel S.; ...

2015-10-01

Particulate transport represents an important mechanism for actinides and fission products at the Earth's surface; soil samples taken in the early 1970's near the Subsurface Disposal Area (SDA) at Idaho National Laboratory (INL) provide a case study for examining the mechanisms and characteristics of actinide transport under arid conditions. Transuranic waste was disposed via shallow land burial at the SDA until shortly after a flooding event that occurred in 1969. In this study we analyze soils collected in the early 1970's for ¹³⁷Cs, ²⁴¹Am, and Pu using a combination of radiometric and mass spectrometric techniques. Two distinct ²⁴⁰Pu/²³⁹Pu isotopic ratiosmore » are observed for contamination from the SDA, with values ranging from at least 0.059 to 0.069. ²⁴¹Am concentrations are observed to increase only slightly in 0-4 cm soils over the ~40 year period since soil sampling, contrary to Markham's previous hypothesis that ²⁴¹Pu is principally associated with the 0-4 cm soil fractions (Markham 1978). The lack of statistical difference in ²⁴¹Am/²³⁹⁺²⁴⁰Pu ratios with depth suggests mechanical transport and mixing discrete contaminated particles under arid conditions. Occasional samples beyond the northeastern corner are observed to contain anomalously high Pu concentrations with corresponding low ²⁴⁰Pu/²³⁹Pu atoms ratios, suggesting the occurrence of "hot particles;" application of a background Pu subtraction results in calculated Pu atom ratios for the "hot particles" which are statistically similar to those observed in the northeastern corner. Taken together, our data suggests that flooding resulted in mechanical transport of contaminated particles into the area between the SDA and the flood containment dike in the northeastern corner, following which subsequent contamination spreading resulted from wind transport of discrete particles.« less

Mechanical environmental transport of actinides and ¹³⁷Cs from an arid radioactive waste disposal site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Snow, Mathew S.; Clark, Sue B.; Morrison, Samuel S.

Particulate transport represents an important mechanism for actinides and fission products at the Earth's surface; soil samples taken in the early 1970's near the Subsurface Disposal Area (SDA) at Idaho National Laboratory (INL) provide a case study for examining the mechanisms and characteristics of actinide transport under arid conditions. Transuranic waste was disposed via shallow land burial at the SDA until shortly after a flooding event that occurred in 1969. In this study we analyze soils collected in the early 1970's for ¹³⁷Cs, ²⁴¹Am, and Pu using a combination of radiometric and mass spectrometric techniques. Two distinct ²⁴⁰Pu/²³⁹Pu isotopic ratiosmore » are observed for contamination from the SDA, with values ranging from at least 0.059 to 0.069. ²⁴¹Am concentrations are observed to increase only slightly in 0-4 cm soils over the ~40 year period since soil sampling, contrary to Markham's previous hypothesis that ²⁴¹Pu is principally associated with the 0-4 cm soil fractions (Markham 1978). The lack of statistical difference in ²⁴¹Am/²³⁹⁺²⁴⁰Pu ratios with depth suggests mechanical transport and mixing discrete contaminated particles under arid conditions. Occasional samples beyond the northeastern corner are observed to contain anomalously high Pu concentrations with corresponding low ²⁴⁰Pu/²³⁹Pu atoms ratios, suggesting the occurrence of "hot particles;" application of a background Pu subtraction results in calculated Pu atom ratios for the "hot particles" which are statistically similar to those observed in the northeastern corner. Taken together, our data suggests that flooding resulted in mechanical transport of contaminated particles into the area between the SDA and the flood containment dike in the northeastern corner, following which subsequent contamination spreading resulted from wind transport of discrete particles.« less

Heavy metals and health risk assessment of arable soils and food crops around Pb-Zn mining localities in Enyigba, southeastern Nigeria

NASA Astrophysics Data System (ADS)

Obiora, Smart C.; Chukwu, Anthony; Davies, Theophilus C.

2016-04-01

This study determined the heavy metals concentration in arable soils and associated food crops around the Pb-Zn mines in Enyigba, Nigeria, and metal transfer factors were calculated. Air-dried samples of the soils and food crops were analyzed for 8 known nutritional and toxic heavy metals by Inductively Coupled Plasma - Mass Spectrometer (ICP-MS) method. Eighty seven percent of all the 20 sampled soils contain Pb in excess of the maximum allowable concentration (MAC) set by Canadian Environmental Quality Guideline (CCME) and European Union (EU) Standard, while Zn in thirty-one percent of the samples exceeded the CCME for MAC of 200 mg/kg. All the food crops, with the exception of yam tuber, contain Pb which exceeded the 0.43 mg/kg and 0.3 mg/kg MAC standards of EU and WHO/FAO respectively, with the leafy vegetables accumulating more Pb than the tubers. The metal transfer factors in the tubers and the leafy vegetables were in the order: Mo > Cu > Zn > Mn > As > Cd > Cr > Ni > Pb and Cd > Cu > Zn > Mn > Mo > As > Ni > Pb > Cr, respectively. Risk assessment studies revealed no health risk in surrounding populations for most of the heavy metals. However, Pb had a high health risk index (HRI) of 1.1 and 1.3, in adults and children, respectively for cassava tuber; Pb had HRI > 1 in lemon grass while Mn also had HRI > 1 in all the leafy vegetables for both adult and children. This high level of HRI for Pb and Mn is an indication that consumers of the food crops contaminated by these metals are at risk of health problems such as Alzheimers' disease and Manganism, associated with excessive intake of these metals. Further systematic monitoring of heavy metal fluxes in cultivable soils around the area of these mines is recommended.

Effects on soil phosphorus dynamics of municipal solid waste compost addition to a burnt and unburnt forest soil.

PubMed

Turrión, María-Belén; Bueis, Teresa; Lafuente, Francisco; López, Olga; San José, Esther; Eleftheriadis, Alexandros; Mulas, Rafael

2018-06-12

The main aim of this research was to assess the effects of municipal solid waste compost (MSWC) addition to a burnt and unburnt calcareous soil, on the distribution of soil P forms in particle-size and extractable fractions. Three MSWC doses (1, 2 and 4% w/w) were added to burnt and unburnt soil samples and were incubated for 92 days at 29 °C and 75% of field capacity moisture. A particle-size fractionation followed by a sequential P extraction procedure was carried out. The burnt soil showed significantly lower concentrations of organic P forms (P org ) and significantly higher concentrations of stable P forms than the unburnt soil. Besides, in both burnt and unburnt soils, most P-forms presented higher concentrations in the clay fractions than in the sand and silt fractions, possibly due to the different proportions of microbial synthesized and plant-derived substances in the different particle-size fractions. Finer fractions of MSWC showed higher total P and P org concentrations than coarser fractions. Our results showed that the highest dose of MSWC was the most effective one for the rehabilitation of the burnt soil. MSWC amendment also caused an increase in soil P availability in the unburnt soil which initially contained relatively low levels of P. During the incubation process, a high proportion of organic P contained in the MSWC was mineralized into inorganic P forms. These forms were precipitated with Ca cations which are very abundant in these calcareous soils, significantly increasing the P fraction extracted by HCl in both amended soils. Hence, adding compost to the soil involved an increase in the available P reservoir in the long term. The combination of particle-size fractionation, chemical sequential extraction and incubation experiments can be a valuable tool for splitting soil phosphorus into different fractions regarding their availability in relation to short and long-term transformations in soil. Copyright © 2017 Elsevier B.V. All rights reserved.

Leaching of arsenic, copper and chromium from thermally treated soil.

PubMed

Kumpiene, Jurate; Nordmark, Désirée; Hamberg, Roger; Carabante, Ivan; Simanavičienė, Rūta; Aksamitauskas, Vladislovas Česlovas

2016-12-01

Thermal treatment, if properly performed, is an effective way of destroying organic compounds in contaminated soil, while impact on co-present inorganic contaminants varies depending on the element. Leaching of trace elements in thermally treated soil can be altered by co-combusting different types of materials. This study aimed at assessing changes in mobility of As, Cr and Cu in thermally treated soil as affected by addition of industrial by-products prior to soil combustion. Contaminated soil was mixed with either waste of gypsum boards, a steel processing residue (Fe 3 O 4 ), fly ash from wood and coal combustion or a steel abrasive (96.5% Fe 0 ). The mixes and unamended soil were thermally treated at 800 °C and divided into a fine fraction <0.125 mm and a coarse fraction >0.125 mm to simulate particle separation occurring in thermal treatment plants. The impact of the treatment on element behaviour was assessed by a batch leaching test, X-ray absorption spectroscopy and dispersive X-ray spectrometry. The results suggest that thermal treatment is highly unfavourable for As contaminated soils as it increased both the As leaching in the fine particle size fraction and the mass of the fines (up to 92%). Soil amendment with Fe-containing compounds prior to the thermal treatment reduced As leaching to the levels acceptable for hazardous waste landfills, but only in the coarse fraction, which does not justify the usefulness of such treatment. Among the amendments used, gypsum most effectively reduced leaching of Cr and Cu in thermally treated soil and could be recommended for soils that do not contain As. Fly ash was the least effective amendment as it increased leaching of both Cr and As in majority of samples. Copyright © 2016 Elsevier Ltd. All rights reserved.

Phosphate fertilizer impacts on glyphosate sorption by soil.

PubMed

Munira, Sirajum; Farenhorst, Annemieke; Flaten, Don; Grant, Cynthia

2016-06-01

This research examined the impact of field-aged phosphate and cadmium (Cd) concentrations, and fresh phosphate co-applications, on glyphosate sorption by soil. Soil samples were collected in 2013 from research plots that had received, from 2002 to 2009, annual applications of mono ammonium phosphate (MAP) at 20, 40 and 80 kg P ha(-1) and from products containing 0.4, 70 or 210 mg Cd kg(-1) as an impurity. A series of batch equilibrium experiments were carried out to quantify the glyphosate sorption distribution constant, Kd. Extractable Cd concentrations in soil had no significant effect on glyphosate sorption. Glyphosate Kd values significantly decreased with increasing Olsen-P concentrations in soil, regardless of the pH conditions studied. Experiments repeated with a commercially available glyphosate formulation showed statistically similar results as the experiments performed with analytical-grade glyphosate. Co-applications of MAP with glyphosate also reduced the available sorption sites to retain glyphosate, but less so when soils already contain large amounts of phosphate. Glyphosate Kd values in soils ranged from 173 to 939 L kg(-1) under very strong to strongly acidic condition but the Kd was always <100 L kg(-1) under moderately acidic to slightly alkaline conditions. The highest Olsen-P concentrations in soil reduced Kd values by 25-44% relative to control soils suggesting that, under moderately acidic to slightly alkaline conditions, glyphosate may become mobile by water in soils with high phosphate levels. Otherwise, glyphosate residues in agricultural soils are more likely to be transported off-site by wind and water-eroded sediments than by leaching or runoff. Copyright © 2016 Elsevier Ltd. All rights reserved.

A regional-scale study of chromium and nickel in soils of northern California, USA

USGS Publications Warehouse

Morrison, J.M.; Goldhaber, M.B.; Lee, L.; Holloway, J.M.; Wanty, R.B.; Wolf, R.E.; Ranville, J.F.

2009-01-01

A soil geochemical survey was conducted in a 27,000-km2 study area of northern California that includes the Sierra Nevada Mountains, the Sacramento Valley, and the northern Coast Range. The results show that soil geochemistry in the Sacramento Valley is controlled primarily by the transport and weathering of parent material from the Coast Range to the west and the Sierra Nevada to the east. Chemically and mineralogically distinctive ultramafic (UM) rocks (e.g. serpentinite) outcrop extensively in the Coast Range and Sierra Nevada. These rocks and the soils derived from them have elevated concentrations of Cr and Ni. Surface soil samples derived from UM rocks of the Sierra Nevada and Coast Range contain 1700-10,000 mg/kg Cr and 1300-3900 mg/kg Ni. Valley soils west of the Sacramento River contain 80-1420 mg/kg Cr and 65-224 mg/kg Ni, reflecting significant contributions from UM sources in the Coast Range. Valley soils on the east side contain 30-370 mg/kg Cr and 16-110 mg/kg Ni. Lower Cr and Ni concentrations on the east side of the valley are the result of greater dilution by granitic sources of the Sierra Nevada. Chromium occurs naturally in the Cr(III) and Cr(VI) oxidation states. Trivalent Cr is a non-toxic micronutrient, but Cr(VI) is a highly soluble toxin and carcinogen. X-ray diffraction and scanning electron microscopy of soils with an UM parent show Cr primarily occurs within chromite and other mixed-composition spinels (Al, Mg, Fe, Cr). Chromite contains Cr(III) and is highly refractory with respect to weathering. Comparison of a 4-acid digestion (HNO3, HCl, HF, HClO4), which only partially dissolves chromite, and total digestion by lithium metaborate (LiBO3) fusion, indicates a lower proportion of chromite-bound Cr in valley soils relative to UM source soils. Groundwater on the west side of the Sacramento Valley has particularly high concentrations of dissolved Cr ranging up to 50 ??g L-1 and averaging 16.4 ??g L-1. This suggests redistribution of Cr during weathering and oxidation of Cr(III)-bearing minerals. It is concluded that regional-scale transport and weathering of ultramafic-derived constituents have resulted in enrichment of Cr and Ni in the Sacramento Valley and a partial change in the residence of Cr.

Comparative phosphorus sorption by marine sediments and agricultural soils in a tropical environment.

PubMed

Fox, Robert L; Fares, Ali; Wan, Y; Evensen, Carl I

2006-01-01

The influence of soil phosphorus (P) sources on P sorption characteristics of marine sediments was investigated for Pearl Harbor and off shore Molokai in Hawaii. Estuary sediments were sampled in seven locations; these represented different soils and on-shore activities. The soil samples included nine major soils that contributed sediment to the Harbor and coastal sediments near the island of Molokai. Sediment and soil samples were equilibrated for 6 days in 0.01 M CaCl(2) solution and synthetic seawater containing differing amounts of P. Phosphorus sorption curves were constructed. The equilibrated solution P, with no P added, ranged from 0.01 to 0.2 mg L(-1); P sorption by sediments at standard solution concentration 0.2 mg L(-1), ranged from 0 to 230 mg kg(-1). Sediment P sorption corresponded closely with soil sorption characteristics. Soils contributing sediments to the west reach of Pearl Harbor are highly weathered Oxisols with high standard P sorption values while those in the southeast of the Harbor were Vertisols and Mollisols which sorb little P. The influence of source materials on sediment P sorption was also observed for off-shore sediments near Molokai. Sediments serve as both source and sink for P in Pearl Harbor and in this role can be a stabilizing influence on P concentration in the water column. Phosphorus sorption curves in conjunction with water quality data can help to understand P dynamics between sediments and the water column and help evaluate concerns about P loading to a water body. For Pearl Harbor, solution P in equilibrium with sediments from the Lochs was 0.021 mg L(-1); a value unlikely to produce an algal bloom. (Measured total P in the water columns (mean) was 0.060.).

A Study of an Unmanned Lunar Mission for the Assay of Volatile Gases from the Soil

NASA Astrophysics Data System (ADS)

Wittenberg, L. J.; Sviatoslavsky, I. N.; Kulcinski, G. L.; Mogahed, E. A.

1999-01-01

The success of a manned lunar outpost may require that indigenous resources be utilized in order to reduce the requirements for the periodic resupply from Earth for the human inhabitants. Some indigenous lunar resources do exist. For instance, studies of the lunar regoliths, acquired by the Apollo and Luna missions from several maria, indicate that upon heating in a vacuum, these soils evolve the volatile gases: helium (He), hydrogen (H2), carbon dioxide (CO2), carbon monoxide (CO), nitrogen (N2), and sulfur dioxide (SO2). The He, H, C, and N were originally implanted by solar wind These gases would be valuable to supply life-support systems. For instance, the H2 could be used as a rocket fuel, or alternatively, reacted with the mineral ilmenite (FeTiO3), indigenous to the lunar soil, to yield water (H2O). In an enclosed structure irradiated by solar energy, the H2O, N2, and CO2 could be utilized to grow edible plants for lunar inhabitants. Alternatively, the H2O could be electrolyzed, using photovoltaic cells, yielding breathable O. The inert gas He, would be useful for filling inflatable structures. In addition, the lunar He contains a high abundance of the rare isotopic He-3, which has been identified as a potentially valuable fuel for nuclear-fusion space power systems. In order to determine the economic potential of these lunar volatiles, we need information to assess the in situ quantities of these gases and identify the most abundant sites. In order to acquire such information, a large number of soil samples must be acquired and analyzed because it is not known if these volatile gases in the soil vary widely over the distance of a few meters or several kilometers. In addition, all of the lunar soil samples were analyzed on Earth, after being contaminated by terrestrial air and water. For these reasons, therefore, a mobile, robotic vehicle has been proposed that would be landed-on a lunar maria and assay the volatiles evolved by heating the indigenous lunar regolith. A lunar rover platform with the sample equipment attached has been designed. This science platform was conceptionally designed to fit on a small Marsokhod Rover (75 kg) with a 100-km range. The proposed sampling protocol would be to collect two samples, nearly adjacent. If the results agreed within the experimental deviation, the rover would proceed 0.5 km along the planned route and select two new samples. The progress of the rover and the results of the analyses would be continuously monitored from Earth so that the sampling protocol could be revised as needed. The scientific equipment would accomplish the assay of the regolith samples in the following sequence: (1) retrieve a sample of regolith from the lunar surface by use of a scoop mounted on the platform; (2) reduce the sample to about 1 g of particles <200 pm; (3) weigh the sample; (4) characterize the mineral content (TiO2); (5) heat the sample to 1200C in a vacuum furnace; (6) collect the volatiles; (7) characterize the volatile products; and (8) transmit the data. The components of the scientific package were conceptually designed and are briefly described: (1) The heater unit. A 1 g sample of the surface regolith would be placed in a ferritic steel crucible 0.8 cm OD x 1.57 cm high. This container would be placed in a coiled electrical heater inside an evacuated 1-L container. Heat transfer calculations indicate that the sample would attain 1200C in 14 min with a 25-W heater. For a high-Ti maria regolith sufficient gases are released to create a pressure of 70 Pa at 30C, which is a sufficient sample for the mass spectrometer. (2) Determination of metallic elements. Before the sample is heated, a laser beam delivers 0.45-2.0 Joules per pulse at a wave length of 1 micron to the surface of the sample. The absorption of the laser energy vaporizes some of the minerals in the soils. The vaporized ions are quantitatively determined by the mass spectrometer. (3) Mass spectrometer. This instrument must be utilized to characterize the mineral content of the soil and the volatile gases, essentially from 1 to 72 AMU range. A Fourier Transform Mass Spectrometer (FTMS) may be particularly useful for this analysis, but requires testing. (4) Powersupply. The initial power subsystem assumed the availability of a general purpose heat source, or a Radioisotope Thermoelectric Generator. If the launch of an RTG is forbidden for safety reasons, alternative power supplies would be considered such as solar-electric or beamed microwave sources.

Determination of Depleted Uranium in Environmental Bio-monitor Samples and Soil from Target sites in Western Balkan Region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sahoo, Sarata K.; Enomoto, Hiroko; Tokonami, Shinji

2008-08-07

Lichen and Moss are widely used to assess the atmospheric pollution by heavy metals and radionuclides. In this paper, we report results of uranium and its isotope ratios using mass spectrometric measurements (followed by chemical separation procedure) for mosses, lichens and soil samples from a depleted uranium (DU) target site in western Balkan region. Samples were collected in 2003 from Han Pijesak (Republika Srpska in Bosnia and Hercegovina). Inductively coupled plasma mass spectrometry (ICP-MS) measurements show the presence of high concentration of uranium in some samples. Concentration of uranium in moss samples ranged from 5.2-755.43 Bq/Kg. We have determined {supmore » 235}U/{sup 238}U isotope ratio using thermal ionization mass spectrometry (TIMS) from the samples with high uranium content and the ratios are in the range of 0.002097-0.002380. TIMS measurement confirms presence of DU in some samples. However, we have not noticed any traces of DU in samples containing lesser amount of uranium or from any samples from the living environment of same area.« less

Large uncertainty in permafrost carbon stocks due to hillslope soil deposits

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shelef, Eitan; Rowland, Joel C.; Wilson, Cathy J.

Here, northern circumpolar permafrost soils contain more than a third of the global Soil Organic Carbon pool (SOC). The sensitivity of this carbon pool to a changing climate is a primary source of uncertainty in simulationbased climate projections. These projections, however, do not account for the accumulation of soil deposits at the base of hillslopes (hill-toes), and the influence of this accumulation on the distribution, sequestration, and decomposition of SOC in landscapes affected by permafrost. Here we combine topographic models with soil-profile data and topographic analysis to evaluate the quantity and uncertainty of SOC mass stored in perennially frozen hill-toemore » soil deposits. We show that in Alaska this SOC mass introduces an uncertainty that is > 200% than state-wide estimates of SOC stocks (77 PgC), and that a similarly large uncertainty may also pertain at a circumpolar scale. Soil sampling and geophysical-imaging efforts that target hill-toe deposits can help constrain this large uncertainty.« less

Large uncertainty in permafrost carbon stocks due to hillslope soil deposits

DOE PAGES

Shelef, Eitan; Rowland, Joel C.; Wilson, Cathy J.; ...

2017-05-31

Here, northern circumpolar permafrost soils contain more than a third of the global Soil Organic Carbon pool (SOC). The sensitivity of this carbon pool to a changing climate is a primary source of uncertainty in simulationbased climate projections. These projections, however, do not account for the accumulation of soil deposits at the base of hillslopes (hill-toes), and the influence of this accumulation on the distribution, sequestration, and decomposition of SOC in landscapes affected by permafrost. Here we combine topographic models with soil-profile data and topographic analysis to evaluate the quantity and uncertainty of SOC mass stored in perennially frozen hill-toemore » soil deposits. We show that in Alaska this SOC mass introduces an uncertainty that is > 200% than state-wide estimates of SOC stocks (77 PgC), and that a similarly large uncertainty may also pertain at a circumpolar scale. Soil sampling and geophysical-imaging efforts that target hill-toe deposits can help constrain this large uncertainty.« less

Molecular biodiversity of arbuscular mycorrhizal fungi in trace metal-polluted soils.

PubMed

Hassan, Saad El Din; Boon, Eva; St-Arnaud, Marc; Hijri, Mohamed

2011-08-01

We assessed the indigenous arbuscular mycorrhizal fungi (AMF) community structure from the roots and associated soil of Plantago major (plantain) plants growing on sites polluted with trace metals (TM) and on unpolluted sites. Uncontaminated and TM-contaminated sites containing As, Cd, Cu, Pb, Sn and Zn were selected based on a survey of the TM concentration in soils of community gardens in the City of Montréal. Total genomic DNA was extracted directly from these samples. PCR followed by denaturing gradient gel electrophoresis (PCR-DGGE), augmented by cloning and sequencing, as well as direct sequencing techniques, was all used to investigate AMF community structure. We found a decreased diversity of native AMF (assessed by the number of AMF ribotypes) in soils and plant roots harvested from TM-polluted soils compared with unpolluted soils. We also found that community structure was modified by TM contamination. Various species of Glomus, Scutellospora aurigloba and S. calospora were the most abundant ribotypes detected in unpolluted soil; ribotypes of G. etunicatum, G. irregulare/G. intraradices and G. viscosum were found in both polluted and unpolluted soils, while ribotypes of G. mosseae and Glomus spp. (B9 and B13) were dominant in TM-polluted soils. The predominance of G. mosseae in metal-polluted sites suggests the tolerance of this species to TM stress, as well as its potential use for phytoremediation. These data are relevant for our understanding of how AMF microbial communities respond to natural environments that contain a broad variety of toxic inorganic compounds and will substantially expand our knowledge of AMF ecology and biodiversity. © 2011 Blackwell Publishing Ltd.

Viral impacts on microbial carbon cycling in thawing permafrost soils

NASA Astrophysics Data System (ADS)

Trubl, G. G.; Roux, S.; Bolduc, B.; Jang, H. B.; Emerson, J. B.; Solonenko, N.; Li, F.; Solden, L. M.; Vik, D. R.; Wrighton, K. C.; Saleska, S. R.; Sullivan, M. B.; Rich, V. I.

2017-12-01

Permafrost contains 30-50% of global soil carbon (C) and is rapidly thawing. While the fate of this C is unknown, it will be shaped in part by microbes and their associated viruses, which modulate host activities via mortality and metabolic control. To date, viral research in soils has been outpaced by that in aquatic environments, due to the technical challenges of accessing viruses as well as the dramatic physicochemical heterogeneity in soils. Here, we describe advances in soil viromics from our research on permafrost-associated soils, and their implications for associated terrestrial C cycling. First, we optimized viral resuspension-DNA extraction methods for a range of soil types. Second, we applied cutting-edge viral-specific informatics methods to recover viral populations, define their gene content, connect them to potential hosts, and analyze their relationships to environmental parameters. A total of 781 viral populations were recovered from size-fractionated virus samples of three soils along a permafrost thaw gradient. Ecological analyses revealed endemism as recovered viral populations were largely unique to each habitat and unlike those in aquatic communities. Genome- and network-based classification assigned these viruses into 226 viral clusters (VCs; genus-level taxonomy), 55% of which were novel. This increases the number of VCs by a third and triples the number of soil viral populations in the RefSeq database (currently contains 256 VCs and 316 soil viral populations). Genomic analyses revealed 85% of the genes were functionally unknown, though 5% of the annotatable genes contained C-related auxiliary metabolic genes (AMGs; e.g. glycoside hydrolases). Using sequence-based features and microbial population genomes, we were able to in silico predict hosts for 30% of the viral populations. The identified hosts spanned 3 phyla and 6 genera but suggested these viruses have species-specific host ranges as >80% of hosts for a given virus were in the same species. Several identified hosts (e.g. Acidobacterium) are dominant community members that play major roles in C cycling through organic matter degradation. Together these findings show that permafrost viruses play a major role in the fate of soil C through infection of key hosts and metabolic reprogramming using specific C cycling AMGs.

Effect of simulated tillage on microbial autotrophic CO2 fixation in paddy and upland soils

PubMed Central

Ge, Tida; Wu, Xiaohong; Liu, Qiong; Zhu, Zhenke; Yuan, Hongzhao; Wang, Wei; Whiteley, A. S.; Wu, Jinshui

2016-01-01

Tillage is a common agricultural practice affecting soil structure and biogeochemistry. To evaluate how tillage affects soil microbial CO2 fixation, we incubated and continuously labelled samples from two paddy soils and two upland soils subjected to simulated conventional tillage (CT) and no-tillage (NT) treatments. Results showed that CO2 fixation (14C-SOC) in CT soils was significantly higher than in NT soils. We also observed a significant, soil type- and depth-dependent effect of tillage on the incorporation rates of labelled C to the labile carbon pool. Concentrations of labelled C in the carbon pool significantly decreased with soil depth, irrespective of tillage. Additionally, quantitative PCR assays revealed that for most soils, total bacteria and cbbL-carrying bacteria were less abundant in CT versus NT treatments, and tended to decrease in abundance with increasing depth. However, specific CO2 fixation activity was significantly higher in CT than in NT soils, suggesting that the abundance of cbbL-containing bacteria may not always reflect their functional activity. This study highlights the positive effect of tillage on soil microbial CO2 fixation, and the results can be readily applied to the development of sustainable agricultural management. PMID:26795428

Polybrominated dibenzo-p-dioxins/ dibenzofurans and polybrominated diphenyl ethers in soil, vegetation, workshop-floor dust, and electronic shredder residue from an electronic waste recycling facility and in soils from a chemical industrial complex in eastern China.

PubMed

Ma, Jing; Addink, Rudolf; Yun, Sehun; Cheng, Jinping; Wang, Wenhua; Kannan, Kurunthachalam

2009-10-01

The formation and release of polybrominated dibenzo-p-dioxins and dibenzofurans (PBDD/Fs) from the incineration of electronic wastes (e-waste) that contain brominated flame retardants (BFRs) are a concern. However, studies on the determination of PBDD/Fs in environmental samples collected from e-waste recycling facilities are scarce. In this study, 11 2,3,7,8-substituted PBDD/Fs and 10 polybrominated diphenyl ether (PBDE) congeners were determined in electronic shredder waste, workshop-floor dust soil, and leaves (of plants on the grounds of the facility) from a large-scale e-waste recycling facility and in surface soil from a chemical-industrial complex (comprising a coke-oven plant, a coal-fired power plant, and a chlor-alkali plant) as well as agricultural areas in eastern China. Total PBDD/F concentrations in environmental samples were in the range of 113-818 pg/g dry wt (dw) for leaves, 392-18500 pg/g dw for electronic shredder residues, 716-800000 pg/g dw for soil samples, and 89600-pg/g dw for workshop-floor dust from the e-waste recycling facility and in a range from nondetect (ND) to 427 pg/g dw in soil from the chemical-industrial complex. The highest mean concentrations of total PBDD/Fs were found in soil samples and workshop-floor dust from the e-waste recycling facility. The dioxin-like toxic equivalent (measured as TEQ) concentrations of PBDD/Fs were greater than the TEQs of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) reported in our previous study for the same set of samples. The concentrations of PBDFs were several orders of magnitude higher than the concentrations of PBDDs in samples from the e-waste facility or from soil from the chemical-industrial complex. A significant correlation was found between the concentrations of sigmaPBDD/Fs and sigmaPBDEs (r = 0.769, p < 0.01) and between sigmaPBDD/Fs and the previously reported sigmaPCDD/F concentrations (r = 0.805, p < 0.01). The estimated daily human intakes of TEQs contributed by PBDD/Fs via soil/dust ingestion and dermal exposures in e-waste recycling facilities were higher than the intakes of TEQs contributed by PCDD/ Fs, calculated in our previous study.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

This document contains information about the research programs being conducted at the Savannah River Plant. Topics of discussion include: thermal cycling absorption process, development of new alloys, ion exchange, oxalate precipitation, calcination, environmental research, remedial action, ecological risk assessments, chemical analysis of salt cakes, natural phenomena hazards assessment, and sampling of soils and groundwater.

An invisible soil acidification: Critical role of soil carbonate and its impact on heavy metal bioavailability

PubMed Central

Wang, Cheng; Li, Wei; Yang, Zhongfang; Chen, Yang; Shao, Wenjing; Ji, Junfeng

2015-01-01

It is well known that carbonates inhibit heavy metals transferring from soil to plants, yet the mechanism is poorly understood. Based on the Yangtze River delta area, we investigated bioaccumulation of Ni and Cd in winter wheat as affected by the presence of carbonates in soil. This study aimed to determine the mechanism through which soil carbonates restrict transport and plant uptake of heavy metals in the wheat cropping system. The results indicate that soil carbonates critically influenced heavy metal transfer from soil to plants and presented a tipping point. Wheat grains harvested from carbonates-depleted (due to severe leaching) soils showed Ni and Cd concentrations 2–3 times higher than those of the wheat grains from carbonates-containing soils. Correspondingly, the incidence of Ni or Cd contamination in the wheat grain samples increased by about three times. With the carbonate concentration >1% in soil, uptake and bioaccumulation of Ni and Cd by winter wheat was independent with the soil pH and carbonate content. The findings suggest that soil carbonates play a critical role in heavy metal transfer from soil to plants, implying that monitoring soil carbonate may be necessary in addition to soil pH for the evaluating soil quality and food safety. PMID:26227091

Preliminary results on the influence of mineralogy on the turnover rates of SOM from different Hungarian soils

NASA Astrophysics Data System (ADS)

Zacháry, Dóra; Szalai, Zoltán; Jakab, Gergely; Németh, Tibor; Sipos, Péter; Filep, Tibor

2016-04-01

Fine textured soils generally considered containing more microbial biomass, and having a lower rate of biomass turnover and organic matter decomposition than coarse textured soils. In spite of this, several recent studies have shown contradicting trends. For example, the relative importance of different clay minerals for stabilizing SOM remains an open question. The aim of this study is to evaluate soil mineralological effect on the turnover of SOM by identifying and quantifying soil phyllosilicates. Our samples are derived from C3 forests and C3 croplands from different sites of Hungary. C4 maize residues are added to the soils in order to get natural 13C enrichment as tracer for the young carbon. Bulk samples of the soils from 0 to 20 cm depth were collected. The samples were dried at room temperature and preincubated in the dark for 4 months at 20 °C. The basic soil properties (pH, cation exchange capacity) were analysed after 2 mm sieving and homogenization. The amount of total C and N in the soils and maize residues were analysed using NDIR-chemiluminescent analyzer (Tekmar Dohrman Apollo 9000N). Particle size distribution was determined by laser diffraction (Fritsch Analysette MicroTec 22 plus) and particle imaging method (Malvern Morphologi G3-ID). The mineralological composition of the samples was determined by X-ray diffraction (Philips PW 1730 X-ray diffractometer). Moist soil equivalent to 400 g dry soil mixed with 2 g maize leaves is kept in air tight glass chambers for 183 days at 20°C. The leaves had previously been dried at 60 °C, were cut into pieces and sieved through a 2 mm mesh. The evolved CO2 is trapped by 10 mL 2 M NaOH, which is exchanged on day 1, 3, 5, 7, 10, 14, 21, 28 and subsequently every 31 days. The fractional abundance of 13C of the soils, the plant material and the evolved CO2 is measured with isotope ratio mass spectrometer (Thermo Scientific Delta V IRMS). Our work show the preliminary results on the link between phyllosilicate mineralogy and soil C dynamic by reporting a quantified phyllosilicate data in connection with SOM turnover and stabilization. Acknowledgement This research was supported by the Hungarian Scientific National Fund (OTKA K100180).

Persistence of isofenphos and isazophos in a mineral and an organic soil.

PubMed

Chapman, R A; Harris, C R

1982-01-01

Isofenphos (Amaze (R), Oftanol (R), BAY 92114, 1-methylethyl 2- [[ethoxy [(1-methylethyl)amino] phosphinothioyl] oxy] benzoate) (20% granular) and isazophos (Miral (R), CGA 12223, 0,0-diethyl 0- [1-isopropyl-5-chloro-1,2,4-triazolyl(3)] phosphorothioate) (50% emulsifiable concentrate) were applied at 3.4 Kg AI/ha and incorporated into sand and muck soil contained in small field plots. Soil samples were taken at intervals, extending over 2 yr in the case of isofenphos. Radishes and carrots served as indicator crops for absorption of insecticides. Soil and crop samples were extracted and analyzed for the insecticides by glc. Isazophos residues in soil declined rapidly with ca. 50% of the initial applications remaining after 2 and 5 wk in the sand and muck respectively, and less than 1 and 3% after 1 yr. Isofenphos residues declined slowly with ca. 50% of the initial application remaining at 12 wk in both soil types. Residues of isofenphos after 1 yr were 15 and 45% of the initial application to sand and muck, respectively, and after 2 yr they had declined to 4 and 14%, respectively. Residues of both materials in radishes and carrots generally did not exceed 0.04 ppm except for carrots grown the first yr in isofenphos treated sand, where 0.25 ppm was found.

Toxic industrial deposit remediation by ant activity

NASA Astrophysics Data System (ADS)

Jilkova, Veronika; Frouz, Jan

2016-04-01

Toxic industrial deposits are often contaminated by heavy metals and the substrates have low pH values. In such systems, soil development is thus slowed down by high toxicity and acidic conditions which are unfavourable to soil fauna. Ants (Hymenoptera, Formicidae) are considered tolerant to heavy metal pollution and are known to increase organic matter content and microbial activity in their nests. Here, we focused on soil remediation caused by three ant species (Formica sanguinea, Lasius niger, and Tetramorium sp.) in an ore-washery sedimentation basin near Chvaletice (Czech Republic). Soil samples were taken from the centre of ant nests and from the nest surroundings (>3 m from nests). Samples were then analyzed for microbial activity and biomass and contents of organic matter and nutrients. As a result, ant species that most influenced soil properties was F. sanguinea as there were higher microbial activity and total nitrogen and ammonia contents in ant nests than in the surrounding soil. We expected such a result because F. sanguinea builds conspicuous large nests and is a carnivorous species that brings substantial amounts of nitrogen in insect prey to their nests. Effects of the other two ant species might be lower because of smaller nests and different feeding habits as they rely mainly on honeydew from aphids or on plant seeds that do not contain much nutrients.

Spatial distribution of vanadium and microbial community responses in surface soil of Panzhihua mining and smelting area, China.

PubMed

Cao, Xuelong; Diao, Muhe; Zhang, Baogang; Liu, Hui; Wang, Song; Yang, Meng

2017-09-01

Spatial distribution of vanadium in surface soils from different processing stages of vanadium-bearing titanomagnetite in Panzhihua mining and smelting area (China) as well as responses of microbial communities including bacteria and fungi to vanadium were investigated by fieldwork and laboratory incubation experiment. The vanadium contents in this region ranged from 149.3 to 4793.6 mg kg -1 , exceeding the soil background value of vanadium in China (82 mg kg -1 ) largely. High-throughput DNA sequencing results showed bacterial communities from different manufacturing locations were quite diverse, but Bacteroidetes and Proteobacteria were abundant in all samples. The contents of organic matter, available P, available S and vanadium had great influences on the structures of bacterial communities in soils. Bacterial communities converged to similar structure after long-term (240 d) cultivation with vanadium containing medium, dominating by bacteria which can tolerate or reduce toxicities of heavy metals. Fungal diversities decreased after cultivation, but Ascomycota and Ciliophora were still the most abundant phyla as in the original soil samples. Results in this study emphasize the urgency of investigating vanadium contaminations in soils and provide valuable information on how vanadium contamination influences bacterial and fungal communities. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of Vegetation Type on Soil Carbon Dynamics Along the Kaidu River in the Yanqi Basin of Northwestern China

NASA Astrophysics Data System (ADS)

Wang, J.; Wang, X.; Wang, W.

2010-12-01

The Kaidu River originates from the central southern slopes of the Tian Shan from where it flows through the Yulduz Basin and the Yanqi Basin into Lake Bosten. There has been intensive agricultural development along the Kaidu River in the Yanqi Basin. Corn and pepper are two of the main crops. Here, we present a study includes comparisons of soil organic carbon (SOC) between typical native vegtation types (e.g., Glycyrhiza uralensis Fisch, Achnatherum splendens and Sophora alopecuroides Linn) and agricultural crops (i.e., corn and pepper). Fourteen soil pits were sampled at five depths (0-5, 5-15, 15-30, 30-50 and 50-100 cm) in August 2010 (Figure 1). Soil organic matter are determined using the traditional Walkley and Black method and Loss-on-ignition at 375°C for 17 hours. As expected, agricultural soils contain higher SOC than non-agriculatural lands. Native vegetation has various effects on vertical distribution of SOC. We discuss how root system influences SOC dynamics along the Kaidu River in the central Xinjiang, China. Fig. 1. Map of sampling sites along the Kaidu River in northwestern China.

Microscope Image of a Martian Soil Surface Sample

NASA Technical Reports Server (NTRS)

2008-01-01

This is the closest view of the material underneath NASA's Phoenix Mars Lander. This sample was taken from the top centimeter of the Martian soil, and this image from the lander's Optical Microscope demonstrates its overall composition.

The soil is mostly composed of fine orange particles, and also contains larger grains, about a tenth of a millimeter in diameter, and of various colors. The soil is sticky, keeping together as a slab of material on the supporting substrate even though the substrate is tilted to the vertical.

The fine orange grains are at or below the resolution of the Optical Microscope. Mixed into the soil is a small amount&mdashabout 0.5 percent&mdashof white grains, possibly of a salt. The larger grains range from black to almost transparent in appearance. At the bottom of the image, the shadows of the Atomic Force Microscope (AFM) beams are visible. This image is 1 millimeter x 2 millimeters.

The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by JPL, Pasadena, Calif. Spacecraft development was by Lockheed Martin Space Systems, Denver.

Laboratory measurements of electrical resistivity versus water content on small soil cores

NASA Astrophysics Data System (ADS)

Robain, H.; Camerlynck, C.; Bellier, G.; Tabbagh, A.

2003-04-01

The assessment of soil water content variations more and more leans on geophysical methods that are non invasive and that allow a high spatial sampling. Among the different methods, DC electrical imaging is moving forward. DC Electrical resistivity shows indeed strong seasonal variations that principally depend on soil water content variations. Nevertheless, the widely used Archie's empirical law [1], that links resistivity with voids saturation and water conductivity is not well suited to soil materials with high clay content. Furthermore, the shrinking and swelling properties of soil materials have to be considered. Hence, it is relevant to develop new laboratory experiments in order to establish a relation between electrical resistivity and water content taking into account the rheological and granulometrical specificities of soil materials. The experimental device developed in IRD laboratory allows to monitor simultaneously (i) the water content, (ii) the electrical resistivity and (iii) the volume of a small cylindrical soil core (100cm3) put in a temperature controlled incubator (30°C). It provides both the shrinkage curve of the soil core (voids volume versus water content) and the electrical resistivity versus water content curve The modelisation of the shrinkage curve gives for each moisture state the water respectively contained in macro and micro voids [2], and then allows to propose a generalized Archie's like law as following : 1/Rs = 1/Fma.Rma + 1/Fmi.Rmi and Fi = Ai/(Vi^Mi.Si^Ni) with Rs : the soil resistivity. Fma and Fmi : the so called "formation factor" for macro and micro voids, respectively. Rma and Rmi : the resistivity of the water contained in macro and micro voids, respectively. Vi : the volume of macro and micro voids, respectively. Si : the saturation of macro and micro voids, respectively. Ai, Mi and Ni : adjustment coefficients. The variations of Rmi are calculated, assuming that Rma is a constant. Indeed, the rise of ionic concentration in water may be neglected during the sewage of macro voids as it corresponds to a small quantity of water for the studied samples. Soil solid components are generally electrical insulators, the conduction of electrical current only lies on two phenomenon occurring in water : (i) volume conduction controlled by the electrolyte concentration in water and the geometrical characteristics of macro voids network ; (ii) surface conduction controlled by the double diffuse layer that depends on the solid-liquid interactions, the specific surface of clay minerals and the geometry of particles contacts. For the water contained in macro voids the preeminent phenomenon seems to be volume conduction while for the water contained in micro voids, it seems to be surface conduction. This hypothesis satisfyingly explains the shape of the electrical resistivity versus water content curves obtained for three different oxisols with clayey, clayey-sandy and sandy-clayey texture. [1] Archie G.E. 1942. The electrical resistivity log as an aid in determining some reservoirs characteristics. Trans. AIME, 146, 54-67. [2] Braudeau E. et al. 1999. New device and method for soil shrinkage curve measurement and characterization. S.S.S.A.J., 63(3), 525-535.

Contamination of Fresh Produce by Microbial Indicators on Farms and in Packing Facilities: Elucidation of Environmental Routes

PubMed Central

Bartz, Faith E.; Lickness, Jacquelyn Sunshine; Heredia, Norma; Fabiszewski de Aceituno, Anna; Newman, Kira L.; Hodge, Domonique Watson; Jaykus, Lee-Ann; García, Santos

2017-01-01

ABSTRACT To improve food safety on farms, it is critical to quantify the impact of environmental microbial contamination sources on fresh produce. However, studies are hampered by difficulties achieving study designs with powered sample sizes to elucidate relationships between environmental and produce contamination. Our goal was to quantify, in the agricultural production environment, the relationship between microbial contamination on hands, soil, and water and contamination on fresh produce. In 11 farms and packing facilities in northern Mexico, we applied a matched study design: composite samples (n = 636, equivalent to 11,046 units) of produce rinses were matched to water, soil, and worker hand rinses during two growing seasons. Microbial indicators (coliforms, Escherichia coli, Enterococcus spp., and somatic coliphage) were quantified from composite samples. Statistical measures of association and correlations were calculated through Spearman's correlation, linear regression, and logistic regression models. The concentrations of all microbial indicators were positively correlated between produce and hands (ρ range, 0.41 to 0.75; P < 0.01). When E. coli was present on hands, the handled produce was nine times more likely to contain E. coli (P < 0.05). Similarly, when coliphage was present on hands, the handled produce was eight times more likely to contain coliphage (P < 0.05). There were relatively low concentrations of indicators in soil and water samples, and a few sporadic significant associations were observed between contamination of soil and water and contamination of produce. This methodology provides a foundation for future field studies, and results highlight the need for interventions surrounding farmworker hygiene and sanitation to reduce microbial contamination of farmworkers' hands. IMPORTANCE This study of the relationships between microbes on produce and in the farm environment can be used to support the design of targeted interventions to prevent or reduce microbial contamination of fresh produce with associated reductions in foodborne illness. PMID:28363965

Contamination of Fresh Produce by Microbial Indicators on Farms and in Packing Facilities: Elucidation of Environmental Routes.

PubMed

Bartz, Faith E; Lickness, Jacquelyn Sunshine; Heredia, Norma; Fabiszewski de Aceituno, Anna; Newman, Kira L; Hodge, Domonique Watson; Jaykus, Lee-Ann; García, Santos; Leon, Juan S

2017-06-01

To improve food safety on farms, it is critical to quantify the impact of environmental microbial contamination sources on fresh produce. However, studies are hampered by difficulties achieving study designs with powered sample sizes to elucidate relationships between environmental and produce contamination. Our goal was to quantify, in the agricultural production environment, the relationship between microbial contamination on hands, soil, and water and contamination on fresh produce. In 11 farms and packing facilities in northern Mexico, we applied a matched study design: composite samples ( n = 636, equivalent to 11,046 units) of produce rinses were matched to water, soil, and worker hand rinses during two growing seasons. Microbial indicators (coliforms, Escherichia coli , Enterococcus spp., and somatic coliphage) were quantified from composite samples. Statistical measures of association and correlations were calculated through Spearman's correlation, linear regression, and logistic regression models. The concentrations of all microbial indicators were positively correlated between produce and hands (ρ range, 0.41 to 0.75; P < 0.01). When E. coli was present on hands, the handled produce was nine times more likely to contain E. coli ( P < 0.05). Similarly, when coliphage was present on hands, the handled produce was eight times more likely to contain coliphage ( P < 0.05). There were relatively low concentrations of indicators in soil and water samples, and a few sporadic significant associations were observed between contamination of soil and water and contamination of produce. This methodology provides a foundation for future field studies, and results highlight the need for interventions surrounding farmworker hygiene and sanitation to reduce microbial contamination of farmworkers' hands. IMPORTANCE This study of the relationships between microbes on produce and in the farm environment can be used to support the design of targeted interventions to prevent or reduce microbial contamination of fresh produce with associated reductions in foodborne illness. Copyright © 2017 American Society for Microbiology.

Constraints on Martian Soil Composition as Inferred from Viking XRFS and Pathfinder APXS and IMP Data

NASA Technical Reports Server (NTRS)

Bridges, N. T.; Crisp, J. A.

2000-01-01

With the successful operation of the Alpha Proton X-Ray Spectrometer (APXS) during 1997's Mars Pathfinder (MPF) mission, geochemistry data are now available from three sites on Mars. APXS raw spectra for six soils and five rocks have been converted to compositional abundances. The Viking Lander X-Ray Fluorescence Spectrometer (XRFS) successfully measured elemental abundances of nine soils at Viking 1 and eight soils at Viking 2. Although the three landing sites are located in different parts of Mars, the soils exhibit broad similarities, with an iron-rich chemistry similar to that of palagonite. However, the Pathfinder sods show some significant differences from Viking soils, notably an enrichment in silica and depletion in sulfur. The XRFS samples consisted of near-surface and deep (up to 22 cm) soils acquired by a collector head at the cod of a retractable boom. It was possible to collect and analyze pebbles as large a 2 cm, but only sod, some in the form of consolidated clods, was sampled. In contrast, the APXS measured materials in situ. This resulted in MPF "rock" analyses that probably had a significant dust component and, as explored here, "soil" analyses that may have contained a rocky component We examine several possibilities to explain these differences and other attributes of the APXS and XRFS data sets: 1) The APXS soil measurements actually sampled a mixture of Viking-like soil and small bits of high-silica, low-sulfur rock, 2) The soils were derived from high-silica rocks mixed with a minor component of globally-homogenized dust; these soils are chemically distinct and have a separate geologic history from the Viking soils. 3) The weathering environment was different at the Pathfinder landing site compared to the Viking sites, and 4) Uncertainties in the XRFS and APXS measurements result in reported elemental abundances different than those that are actually present We show that none of the possibilities can be discounted, but that an MPF soil distinct in composition from Viking sods is best supported by the available data.

Application of Molecular Techniques To Elucidate the Influence of Cellulosic Waste on the Bacterial Community Structure at a Simulated Low-Level-Radioactive-Waste Site▿ †

PubMed Central

Field, Erin K.; D'Imperio, Seth; Miller, Amber R.; VanEngelen, Michael R.; Gerlach, Robin; Lee, Brady D.; Apel, William A.; Peyton, Brent M.

2010-01-01

Low-level-radioactive-waste (low-level-waste) sites, including those at various U.S. Department of Energy sites, frequently contain cellulosic waste in the form of paper towels, cardboard boxes, or wood contaminated with heavy metals and radionuclides such as chromium and uranium. To understand how the soil microbial community is influenced by the presence of cellulosic waste products, multiple soil samples were obtained from a nonradioactive model low-level-waste test pit at the Idaho National Laboratory. Samples were analyzed using 16S rRNA gene clone libraries and 16S rRNA gene microarray (PhyloChip) analyses. Both methods revealed changes in the bacterial community structure with depth. In all samples, the PhyloChip detected significantly more operational taxonomic units, and therefore relative diversity, than the clone libraries. Diversity indices suggest that diversity is lowest in the fill and fill-waste interface (FW) layers and greater in the wood waste and waste-clay interface layers. Principal-coordinate analysis and lineage-specific analysis determined that the Bacteroidetes and Actinobacteria phyla account for most of the significant differences observed between the layers. The decreased diversity in the FW layer and increased members of families containing known cellulose-degrading microorganisms suggest that the FW layer is an enrichment environment for these organisms. These results suggest that the presence of the cellulosic material significantly influences the bacterial community structure in a stratified soil system. PMID:20305022

[X-ray diffraction (XRD) and near infrared spectrum (NIR) analysis of the soil overlying the Bairendaba deposit of the Inner Mongolia Grassland].

PubMed

Luo, Song-ying; Cao, Jian-jin; Wu, Zheng-quan

2014-08-01

The soil samples uniformly overlying the Bairendaba deposit of the Inner Mongolia grassland were collected, and ana- lyzed with X-ray diffraction (XRD) and near infrared spectrum (NIR), for exploring the origins of the soil from the, grassland mining area and the relationship with the underground rock. The results show that the samp]s consist of quartz, graphite, carbonate, hornblende, mica, chlorite, montmorillonite, illite, berlinite, diaspore, azurite, hen tite, etc. These indicate that the soil samples were not only from the weathering products of the surface rock, but also from the underground rock mass and the alteration of the wall rock. The azurite and the hematite contained in the soil, mainly coming from the oxidation zone of the orebodies, can be used as the prospecting marks. The alteration mineral assemblage is mainly chlorite-illite-montmorillonite and it experienced the alteration process of potassic alteration-->silicification-->carbonatization-->silk greisenization-->clayization. Also, the wall rock alteration and the physical weathering processes can be accurately restored by analyzing the combination of the alteration minerals, which can provide important reference information for the deep ore prospecting and the ore deposit genesis study, improving the rate of the prospecting. The XRD and NIR with the characteristics of the economy and quickness can be used for the identification of mineral composition of soil, and in the study of mineral and mineral deposits. Especially, NIR has its unique superiority, that is, its sample request is low, and it can analyze a batch of samples quickly. With the development of INR, it will be more and more widely applied in geological field, and can play an important role in the ore exploration.

The potential of flow-through microdialysis for probing low-molecular weight organic anions in rhizosphere soil solution.

PubMed

Sulyok, Michael; Miró, Manuel; Stingeder, Gerhard; Koellensperger, Gunda

2005-08-01

In this paper, flow-through microdialysis is presented as a novel analytical tool for automatic sampling of low molecular weight organic anions (LMWOA), such as oxalate and citrate, in solid samples of environmental concern. The microsampling methodology involves the implantation of dedicated capillary-type probes offering unrivalled spatial resolution (ca. 200μm) in definite soil sites. These passive samplers are aimed at monitoring local processes, such as the release of organic acids occurring in the rhizosphere environment, in nearly real-time. The influence of chemical and physical variables (composition and flow rate of the perfusion liquid, ionic strength and pH of the outer medium and presence of metal ions therein) was assessed in vitro using liquid-phase assays. On the other hand, the resistance of the external solid medium to mass transfer, and the actual applicability of in vivo calibration methods were investigated using quartz sand as an inert model soil. Microdialysers furnished with 3cm long semipermeable tubular membranes were perfused with 0.01M NaNO 3 at a flow rate of 2.0μl/min, yielding dialysis recoveries ≥45% for both assayed LMWOAs in simulated background soil electrolyte solutions, and ≥24% in the interstitial liquid of complex solid samples. Full knowledge of the fate of LMWOAs in soils was obtained through the application of stimulus-response approaches that mimic the discrete exudation pulses of roots. Highly time-resolved microdialysates were used to discern readily available species such as free carboxylic anions and LMW metal-organic acid complexes from adsorbed, precipitated or mineralised analyte species in a variety of soil samples containing variable amounts of organic matter, exchangeable cations and different levels of metal pollution.

Novel colorimetric method overcoming phosphorus interference during trace arsenic analysis in soil solution.

PubMed

Makris, Konstantinos C; Punamiya, Pravin; Sarkar, Dibyendu; Datta, Rupali

2008-02-01

A sensitive (method detection limit, 2.0 microg As L(-1)) colorimetric determination of trace As(v) and As(iii) concentrations in the presence of soluble phosphorus (P) concentrations in soil/water extracts is presented. The proposed method modifies the malachite green method (MG) originally developed for P in soil and water. Our method relies upon the finding that As(iii) and As(v) do not develop the green color during P analysis using the MG method. When an optimum concentration of ascorbic acid (AA) is added to a sample containing up to 15 times P > As (microM) concentrations, the final sample absorbance due to P will be equal to that of As(v) molecules. The soluble As concentration can then be quantified by the concentration difference between the mixed oxyanion (As + P) absorbance (proposed method) and the MG method absorbance that measures only P. Our method is miniaturized using a 96-well microplate UV-VIS reader that utilizes minute reagent and sample volumes (120 and 200 microL sample(-1), respectively), thus, minimizing waste and offering flexibility in the field. Our method was tested in a suite of As-contaminated soils that successfully measured both As and P in soil water extracts and total digests. Mean% As recoveries ranged between 84 and 117%, corroborating data obtained with high-resolution inductively-coupled plasma mass-spectrometry. The performance of the proposed colorimetric As method was unaffected by the presence of Cu, Zn, Pb, Ni, Fe, Al, Si, and Cr in both neutral and highly-acidic (ca. pH 2) soil extracts. Data from this study provide the proof of concept towards creating a field-deployable, portable As kit.

A geophysical and biochemical investigation of buried remains in contrasting soil textures in southern Ontario

NASA Astrophysics Data System (ADS)

Lowe, Amanda C.

Ground penetrating radar (GPR) is a non-invasive, geophysical tool used for the detection of clandestine graves. GPR operates by detecting density differences in soil by the transmission of high frequency electromagnetic (EM) waves from an antenna. A 500 Megahertz (MHz) frequency antenna is typically used for forensic investigations, as it provides a suitable compromise between depth of penetration and sub-surface resolution. Domestic pig (Sus scrofa) carcasses were clothed in 100% cotton t-shirts and 50% cotton/50% polyester briefs, and buried at a consistent depth at three field sites of contrasting soil texture (silty clay loam, fine sand and fine sandy loam) in southern Ontario. GPR was used to detect and monitor the graves for a period of 14 months post burial. Analysis of collected data revealed that GPR had applicability in the detection of clandestine graves containing remains in silty clay loam and fine sandy loam soils, but was not suitable for detection in fine sandy soil. Specifically, within a fine sandy loam soil, there is the potential to estimate the post burial interval (PBI), as hyperbolic grave response was well defined at the beginning of the 14 month burial duration, but became less distinctive near the completion of the study. Following the detection of a clandestine grave containing a carcass, collection of gravesoil, tissue and textile samples is important for the estimation of the stage of decomposition and the post burial interval (PBI) of the remains. Throughout the decomposition process of a carcass, adipose tissue is subjected to hydrolytic enzymes that convert triglycerides to their corresponding unsaturated, saturated and salts of fatty acids. The composition of fatty acids in the decomposed tissue will vary with the post mortem period, but it is unknown what affect the soil texture has on lipid degradation. As decomposition proceeds, fatty acids can leach from the tissues into the surrounding burial environment. Fatty acid analysis of gravesoil, tissue and textile samples, exhumed at two, eleven and fourteen month post burial intervals, was conducted using diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS), attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy and gas chromatography-mass spectrometry (GC-MS). Infrared (IR) spectroscopy analysis of the samples provided a qualitative profile of lipid degradation. Analysis of gravesoil samples did not reveal IR spectroscopy bands attributable to fatty acid degradation or adipocere formation. IR spectroscopy analysis of tissue samples is applicable for the estimation of carcass decomposition in all of the soil textures tested. Results of textile IR spectroscopy analysis revealed limited potential to estimate the stage of carcass decomposition in silty clay loam soil. GC-MS was used to quantify the peak area ratio (area/int std area) (PAR) of myristic (C14:0), palmitic (C16:0), palmitoleic (C16:1), stearic (C18:0) and oleic (C18:1) acids. GC-MS results revealed that analysis of both tissue and textile samples can be useful in the estimation of the stage of decomposition and the PBI of carcasses in all three of the soil textures tested. The results of this research may have applicability within forensic investigations involving decomposing bodies by aiding in the location of clandestine graves in silty clay loam and fine sandy loam soil through the use of GPR. Infrared spectroscopy and GC-MS analysis of the fatty acid composition of tissue and textile samples may also be incorporated into investigational protocols to aid in the estimation of the stage of decomposition and the PBI of a body. Key Words: forensic science, ground penetrating radar, soil texture, buried remains, fatty acids, gas chromatography-mass spectrometry (GC-MS), infrared spectroscopy

Soil risk assessment of As and Zn contamination in a coal mining region using geostatistics [corrected].

PubMed

Komnitsas, Kostas; Modis, Kostas

2006-12-01

The present paper aims to map As and Zn contamination and assess the risk for agricultural soils in a wider disposal site containing wastes derived from coal beneficiation. Geochemical data related to environmental studies show that the waste characteristics favor solubilisation and mobilization of inorganic contaminants and in some cases the generation of acidic leachates. 135 soil samples were collected from a 34 km(2) area and analysed by using geostatistics under the maximum entropy principle in order to produce risk assessment maps and estimate the probability of soil contamination. In addition, the present paper discusses the main issues related to risk assessment in wider mining and waste disposal sites in order to assist decision makers in selecting feasible rehabilitation schemes.

Residues and potential ecological risks of veterinary antibiotics in manures and composts associated with protected vegetable farming.

PubMed

Zhang, Haibo; Luo, Yongming; Wu, Longhua; Huang, Yujuan; Christie, Peter

2015-04-01

Veterinary antibiotics (VAs) are emerging contaminants and enter into soil principally by agricultural application of organic fertilizer. A total of 33 solid animal manures and 17 compost samples from protected vegetable farms in nine areas of China were analyzed for the antibiotic classes of tetracyclines, fluoroquinolones, sulfonamides, and macrolides (17 substances in total). Oxytetracycline was found as a dominant compound in the samples, and its highest concentration reached 416.8 mg kg(-1) in a chicken manure sample from Shouguang, Shandong Province. Among the samples, animal manures (especially pig manure) contained higher VA residues than composts. However, fluoroquinolones exhibited higher persistence in the compost samples than other antibiotic classes. This is particularly the case in the rice husk compost, which contained the highest level of ofloxacin and ciprofloxacin (1334.5 and 1717.4 μg kg(-1) on average, respectively). The veterinary antibiotic profile in the risk husk compost had a good relationship with that in the corresponding manures. The refined commercial compost had the lowest VA residues among the compost samples in general. This implied that composting process might be important to reduce the antibiotic residue. High residue of antibiotics in soil was assumed to be a hazard to ecosystem. This is especially noticeable under current application rates (150 t ha(-1) a(-1)) in protected vegetable farming because over half of the samples exhibited a risk quotient (RQ) >1 for one or more antibiotics.

The initial exploration of Mars - Rationale for a return mission to Chryse Planitia and the Viking 1 Lander

NASA Technical Reports Server (NTRS)

Craddock, Robert A.

1992-01-01

A discussion of the concepts behind planning a landing site on Mars is presented. On the basis of the engineering constraints and the scientific objectives which are likely to be imposed on the first few missions to the surface, reasons for supporting a return to Chryse Planitia and the Viking 1 landing site are given. Samples from the Hesperian ridged plains would be useful in establishing an absolute age for the present crater chronology, and samples of soils from the vicinity of the Viking 1 lander would be useful in determining the significance of the results from the Viking biological experiments. Soil samples would provide consistency between unmanned and manned missions, may contain fossil microorganisms, and could be useful in determining the mechanism responsible for outflow channel formation.

Ice nucleation activity of agricultural soil dust aerosols from Mongolia, Argentina, and Germany

NASA Astrophysics Data System (ADS)

Steinke, I.; Funk, R.; Busse, J.; Iturri, A.; Kirchen, S.; Leue, M.; Möhler, O.; Schwartz, T.; Schnaiter, M.; Sierau, B.; Toprak, E.; Ullrich, R.; Ulrich, A.; Hoose, C.; Leisner, T.

2016-11-01

Soil dust particles emitted from agricultural areas contain considerable mass fractions of organic material. Also, soil dust particles may act as carriers for potentially ice-active biological particles. In this work, we present ice nucleation experiments conducted in the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) cloud chamber. We investigated the ice nucleation efficiency of four types of soil dust from different regions of the world. The results are expressed as ice nucleation active surface site (INAS) densities and presented for the immersion freezing and the deposition nucleation mode. For immersion freezing occurring at 254 K, samples from Argentina, China, and Germany show ice nucleation efficiencies which are by a factor of 10 higher than desert dusts. On average, the difference in ice nucleation efficiencies between agricultural and desert dusts becomes significantly smaller at temperatures below 247 K. In the deposition mode the soil dusts showed higher ice nucleation activity than Arizona Test Dust over a temperature range between 232 and 248 K and humidities RHice up to 125%. INAS densities varied between 109 and 1011 m-2 for these thermodynamic conditions. For one soil dust sample (Argentinian Soil), the effect of treatments with heat was investigated. Heat treatments (383 K) did not affect the ice nucleation efficiency observed at 249 K. This finding presumably excludes proteinaceous ice-nucleating entities as the only source of the increased ice nucleation efficiency.

[Bare Soil Moisture Inversion Model Based on Visible-Shortwave Infrared Reflectance].

PubMed

Zheng, Xiao-po; Sun, Yue-jun; Qin, Qi-ming; Ren, Hua-zhong; Gao, Zhong-ling; Wu, Ling; Meng, Qing-ye; Wang, Jin-liang; Wang, Jian-hua

2015-08-01

Soil is the loose solum of land surface that can support plants. It consists of minerals, organics, atmosphere, moisture, microbes, et al. Among its complex compositions, soil moisture varies greatly. Therefore, the fast and accurate inversion of soil moisture by using remote sensing is very crucial. In order to reduce the influence of soil type on the retrieval of soil moisture, this paper proposed a normalized spectral slope and absorption index named NSSAI to estimate soil moisture. The modeling of the new index contains several key steps: Firstly, soil samples with different moisture level were artificially prepared, and soil reflectance spectra was consequently measured using spectroradiometer produced by ASD Company. Secondly, the moisture absorption spectral feature located at shortwave wavelengths and the spectral slope of visible wavelengths were calculated after analyzing the regular spectral feature change patterns of different soil at different moisture conditions. Then advantages of the two features at reducing soil types' effects was synthesized to build the NSSAI. Thirdly, a linear relationship between NSSAI and soil moisture was established. The result showed that NSSAI worked better (correlation coefficient is 0.93) than most of other traditional methods in soil moisture extraction. It can weaken the influences caused by soil types at different moisture levels and improve the bare soil moisture inversion accuracy.

Zinc distribution in soils amended with different kinds of sewage sludge.

PubMed

Torri, Silvana Irene; Lavado, Raúl

2008-09-01

Sewage sludge (SS) can be applied to cropland to supply and recycle nutrients and organic carbon. Potentially toxic elements in the sludge, however, are of environmental concern. This study evaluates the changes in chemical speciation of Zn in three representative pristine soils of the Pampas Region, Argentina, measured with sequential extraction over a one-year period. Pure SS or SS containing 30% (DM) of its own incineration ash (AS) was applied to the soils at an application rate of 150 Mg ha(-1). Zn was sequentially fractionated into exchangeable, organically bound, inorganic and residual fractions. The application of the SS and AS amendments significantly increased Zn concentration in all soil fractions at each sampling date. At day 1, Zn was mainly found in the residual fraction. A year after the application of the amendments, redistribution towards the inorganic fraction was observed (41-76% of total Zn content). Zn found in exchangeable and inorganic fractions depended on soil pH rather than on the type of soil used. A negative and significant correlation was found between exchangeable Zn concentrations and soil pH (r=0.94), and a positive and significant correlation between inorganic Zn concentrations and soil pH (r=0.92). For each amended soil and sampling date, no significant differences were observed between SS or AS treatments for the exchangeable fraction. Moreover, the use of AS did not cause significant differences in Zn concentration in the other soil fractions compared to SS. Based on these results, land spreading of AS may be similar to SS diaposal in terms of Zn mobility.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dorfman, D.

Earthworms can live in soils containing high quantities of mercury, lead, and zinc. The worms (Lumbricus terrestris) concentrate these heavy metals in their tissues. The use of these worms to reduce the quantities of mercury and other heavy metals in soils may be practical. In July, 1993, a preliminary study was made using earthworms and soils with differing amounts of mercury, The quantities were 0.0 grams, 0.5 grams, and 1.0 grams of mercury as mercuric chloride. Earthworms were placed into these soils for two or more weeks, then harvested. The worms were rinsed with deionized water, then dissolved in nitricmore » acid. Each sample was prepared for analysis with the addition of HNO{sub 3}, H{sub 2}SO{sub 4}, potassium permanganate, and hydrozylamine hydrochloride. A Jerome Instrument gold foil analyzer was used to determine levels of mercury after volatilizing the sample with stannous chloride. Worms exposed to contaminated soils remove 50 to 1,400 times as much mercury as do worms in control soils. In a hypothetical case, a site contaminated with one pound of mercury, 1,000 to 45,000 worms would be required to reduce mercury levels to background levels in the soil (about 250 ppb). After harvesting worms in contaminated soil they could be dried (90% of their weight is water), and the mercury regained by chemical processes. Soil conducive to earthworm survival is required. This includes a well aerated loamy soil, proper pH (7.0), and periodic watering and feeding. There are several methods of harvesting worms, including flooding and electricity. Large numbers of worms can be obtained from commercial growers.« less

A Model for Formation of Dust, Soil and Rock Coatings on Mars: Physical and Chemical Processes on the Martian Surface

NASA Technical Reports Server (NTRS)

Bishop, Janice; Murchie, Scott L.; Pieters, Carle M.; Zent, Aaron P.

2001-01-01

This model is one of many possible scenarios to explain the generation of the current surface material on Mars using chemical, magnetic and spectroscopic data From Mars and geologic analogs from terrestrial sites. One basic premise of this model is that the dust/soil units are not derived exclusively from local rocks, but are rather a product of global, and possibly remote, weathering processes. Another assumption in this model is that there are physical and chemical interactions of the atmospheric dust particles and that these two processes create distinctly different results on the surface. Physical processes distribute dust particles on rocks and drift units, forming physically-aggregated layers; these are reversible processes. Chemical reactions of the dust/soil particles create alteration rinds on rock surfaces and cohesive, crusted surface units between rocks, both of which are relatively permanent materials. According to this model the dominant components of the dust/soil particles are derived from alteration of volcanic ash and tephra, and contain primarily nanophase and poorly crystalline ferric oxides/oxyhydroxide phases as well as silicates. These phases are the alteration products that formed in a low moisture environment. These dust/soil particles also contain a smaller amount of material that was exposed to more water and contains crystalline ferric oxides/oxyhydroxides, sulfates and clay silicates. These components could have formed through hydrothermal alteration at steam vents or fumeroles, thermal fluids, or through evaporite deposits. Wet/dry cycling experiments are presented here on mixtures containing poorly crystalline and crystalline ferric oxides/oxyhydroxides, sulfates and silicates that range in size from nanophase to 1-2 pm diameter particles. Cemented products of these soil mixtures are formed in these experiments and variation in the surface texture was observed for samples containing smectites, non-hydrated silicates or sulfates. Reflectance spectra were measured of the initial particulate mixtures, the cemented products and ground versions of the cemented material. The spectral contrast in the visible/near-infrared and mid-infrared regions is significantly reduced for the cemented material compared to the initial soil, and somewhat reduced for the ground, cemented soil compared to the initial soil. The results of this study suggest that diurnal and seasonal cycling on Mars will have a profound effect on the texture and spectral properties of the dust/soil particles on the surface. The model developed in this study provides an explanation for the generation of cemented or crusted soil units and rock coatings on Mars and may explain albedo variations on the surface observed near large rocks or crater rims.

Concentrations of trace elements and iron in the Arctic soils of Belyi Island (the Kara Sea, Russia): patterns of variation across landscapes.

PubMed

Moskovchenko, D V; Kurchatova, A N; Fefilov, N N; Yurtaev, A A

2017-05-01

The concentrations of several trace elements and iron were determined in 26 soil samples from Belyi Island in the Kara Sea (West Siberian sector of Russian Arctic). The major types of soils predominating in the soil cover were sampled. The concentrations of trace elements (mg kg -1 ) varied within the following ranges: 119-561 for Mn, 9.5-126 for Zn, 0.082-2.5 for Cd, <0.5-19.2 for Cu, <0.5-132 for Pb, 0.011-0.081 for Hg, <0.5-10.3 for Co, and 7.6-108 for Cr; the concentration of Fe varied from 3943 to 37,899 mg kg -1 . The impact of particular soil properties (pH, carbon and nitrogen contents, particle-size distribution) on metal concentrations was analyzed by the methods of correlation, cluster, and factor analyses. The correlation analysis showed that metal concentrations are negatively correlated with the sand content and positively correlated with the contents of silt and clay fractions. The cluster analysis allowed separation of the soils into three clusters. Cluster I included the soils with the high organic matter content formed under conditions of poor drainage; cluster II, the low-humus sandy soils of the divides and slopes; and cluster III, saline soils of coastal marshes. It was concluded that the geomorphic position largely controls the soil properties. The obtained data were compared with data on metal concentrations in other regions of the Russian Arctic. In general, the concentrations of trace elements in the studied soils were within the ranges typical of the background Arctic territories. However, some soils of Belyi Island contained elevated concentrations of Pb and Cd.

Effects of biochar amendment on geotechnical properties of landfill cover soil.

PubMed

Reddy, Krishna R; Yaghoubi, Poupak; Yukselen-Aksoy, Yeliz

2015-06-01

Biochar is a carbon-rich product obtained when plant-based biomass is heated in a closed container with little or no available oxygen. Biochar-amended soil has the potential to serve as a landfill cover material that can oxidise methane emissions for two reasons: biochar amendment can increase the methane retention time and also enhance the biological activity that can promote the methanotrophic oxidation of methane. Hydraulic conductivity, compressibility and shear strength are the most important geotechnical properties that are required for the design of effective and stable landfill cover systems, but no studies have been reported on these properties for biochar-amended landfill cover soils. This article presents physicochemical and geotechnical properties of a biochar, a landfill cover soil and biochar-amended soils. Specifically, the effects of amending 5%, 10% and 20% biochar (of different particle sizes as produced, size-20 and size-40) to soil on its physicochemical properties, such as moisture content, organic content, specific gravity and pH, as well as geotechnical properties, such as hydraulic conductivity, compressibility and shear strength, were determined from laboratory testing. Soil or biochar samples were prepared by mixing them with 20% deionised water based on dry weight. Samples of soil amended with 5%, 10% and 20% biochar (w/w) as-is or of different select sizes, were also prepared at 20% initial moisture content. The results show that the hydraulic conductivity of the soil increases, compressibility of the soil decreases and shear strength of the soil increases with an increase in the biochar amendment, and with a decrease in biochar particle size. Overall, the study revealed that biochar-amended soils can possess excellent geotechnical properties to serve as stable landfill cover materials. © The Author(s) 2015.

Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems.

PubMed

Noyes, Noelle R; Yang, Xiang; Linke, Lyndsey M; Magnuson, Roberta J; Cook, Shaun R; Zaheer, Rahat; Yang, Hua; Woerner, Dale R; Geornaras, Ifigenia; McArt, Jessica A; Gow, Sheryl P; Ruiz, Jaime; Jones, Kenneth L; Boucher, Christina A; McAllister, Tim A; Belk, Keith E; Morley, Paul S

2016-04-20

It has been proposed that livestock production effluents such as wastewater, airborne dust and manure increase the density of antimicrobial resistant bacteria and genes in the environment. The public health risk posed by this proposed outcome has been difficult to quantify using traditional microbiological approaches. We utilized shotgun metagenomics to provide a first description of the resistome of North American dairy and beef production effluents, and identify factors that significantly impact this resistome. We identified 34 mechanisms of antimicrobial drug resistance within 34 soil, manure and wastewater samples from feedlot, ranch and dairy operations. The majority of resistance-associated sequences found in all samples belonged to tetracycline resistance mechanisms. We found that the ranch samples contained significantly fewer resistance mechanisms than dairy and feedlot samples, and that the resistome of dairy operations differed significantly from that of feedlots. The resistome in soil, manure and wastewater differed, suggesting that management of these effluents should be tailored appropriately. By providing a baseline of the cattle production waste resistome, this study represents a solid foundation for future efforts to characterize and quantify the public health risk posed by livestock effluents.

Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems

PubMed Central

Noyes, Noelle R.; Yang, Xiang; Linke, Lyndsey M.; Magnuson, Roberta J.; Cook, Shaun R.; Zaheer, Rahat; Yang, Hua; Woerner, Dale R.; Geornaras, Ifigenia; McArt, Jessica A.; Gow, Sheryl P.; Ruiz, Jaime; Jones, Kenneth L.; Boucher, Christina A.; McAllister, Tim A.; Belk, Keith E.; Morley, Paul S.

2016-01-01

It has been proposed that livestock production effluents such as wastewater, airborne dust and manure increase the density of antimicrobial resistant bacteria and genes in the environment. The public health risk posed by this proposed outcome has been difficult to quantify using traditional microbiological approaches. We utilized shotgun metagenomics to provide a first description of the resistome of North American dairy and beef production effluents, and identify factors that significantly impact this resistome. We identified 34 mechanisms of antimicrobial drug resistance within 34 soil, manure and wastewater samples from feedlot, ranch and dairy operations. The majority of resistance-associated sequences found in all samples belonged to tetracycline resistance mechanisms. We found that the ranch samples contained significantly fewer resistance mechanisms than dairy and feedlot samples, and that the resistome of dairy operations differed significantly from that of feedlots. The resistome in soil, manure and wastewater differed, suggesting that management of these effluents should be tailored appropriately. By providing a baseline of the cattle production waste resistome, this study represents a solid foundation for future efforts to characterize and quantify the public health risk posed by livestock effluents. PMID:27095377

Chemical compositions and sources of organic matter in fine particles of soils and sands from the vicinity of Kuwait city.

PubMed

Rushdi, Ahmed I; Al-Zarban, Sheikha; Simoneit, Bernd R T

2006-09-01

Fine particles in the atmosphere from soil and sand resuspension contain a variety of organic compounds from natural biogenic and anthropogenic matter. Soil and sand samples from various sites near Kuwait city were collected, sieved to retain the fine particles, and extracted with a mixture of dichloromethane and methanol. The extracts were derivatized and analyzed by gas chromatography-mass spectrometry in order to characterize the chemical compositions and sources of the organic components. The major inputs of organic compounds were from both natural biogenic and anthropogenic sources in these samples. Vegetation was the major natural source of organic compounds and included n-alkanols, n-alkanoic acids, n-alkanes, sterols and triterpenoids. Saccharides had high concentrations (31-43%) in the sand dune and seafront samples, indicating sources from decomposed vegation materials and/or the presence of viable microbiota such as bacteria and fungi. Vehicular emission products, leakage of lubricating oils, discarded plastics and emissions from cooking operations were the major anthropogenic inputs in the samples from the urban areas. This input was mainly UCM, n-alkanes, hopanes, plasticizers and cholesterol, respectively.

Chemical characterization of iron-mediated soil organic matter stabilization in tropical subsoils

NASA Astrophysics Data System (ADS)

Coward, E.; Plante, A. F.; Thompson, A.

2015-12-01

Tropical forest soils contribute disproportionately to the poorly-characterized and persistent deep soil carbon (C) pool. Highly-weathered and often extending one to two meters deep, these soils also contain an abundance of semicrystalline, Fe- and Al-containing short-range-order (SRO) minerals, metastable derivatives of framework silicate and ferromagnesian parent materials. SRO minerals are capable of soil organic matter (SOM) stabilization through sorption or co-precipitation, a faculty enhanced by their high specific surface area (SSA). As such, SRO-mediated organomineral associations may prove a critical, yet matrix-selective, driver of SOM stabilization capacity in tropical soils, particularly at depth. Surface (0-20 cm) and subsoil (50-80 cm) samples were taken from 20 quantitative soil pits dug in the Luquillo Critical Zone Observatory, located in northeast Puerto Rico. Soils were stratified across granodiorite and volcaniclastic parent materials, spanning primary mineral contents of 5 to 40%. Selective dissolution procedures were used to isolate distinct forms of Fe-C interactions: (1) sodium pyrophosphate to isolate organo-mineral complexes, (2) hydroxylamine and (3) oxalate to isolate SRO phases, and (4) inorganic dithionite to isolate crystalline Fe oxides. Extracts were analysed for dissolved organic C (DOC) and Fe and Al concentrations to estimate SOM associated with each mineral phase. Soils were also subjected to SSA analysis, 57Fe-Mössbauer spectroscopy and X-ray diffraction before and after extraction to determine the contribution of extracted mineral phases to SOM stabilization capacity. Preliminary results indicate a dominance of secondary (hydr)oxides and kaolin minerals in surface soils, strongly driven by parent material. With depth, however, we observe a marked shift towards SRO mineral phases across both parent materials, suggesting that SRO-mediated organomineral associations are significant contributors to observed C storage in tropical subsoils.

Determination of (90)Sr in soil samples using inductively coupled plasma mass spectrometry equipped with dynamic reaction cell (ICP-DRC-MS).

PubMed

Feuerstein, J; Boulyga, S F; Galler, P; Stingeder, G; Prohaska, T

2008-11-01

A rapid method is reported for the determination of (90)Sr in contaminated soil samples in the vicinity of the Chernobyl Nuclear Power Plant by ICP-DRC-MS. Sample preparation and measurement procedures focus on overcoming the isobaric interference of (90)Zr, which is present in soils at concentrations higher by more than six orders of magnitude than (90)Sr. Zirconium was separated from strontium in two steps to reduce the interference by (90)Zr(+) ions by a factor of more than 10(7): (i) by ion exchange using a Sr-specific resin and (ii) by reaction with oxygen as reaction gas in a dynamic reaction cell (DRC) of a quadrupole ICP-MS. The relative abundance sensitivity of the ICP-MS was studied systematically and the peak tailing originating from (88)Sr on mass 90 u was found to be about 3 x 10(-9). Detection limits of 4 fg g(-1) (0.02 Bq g(-1)) were achieved when measuring Sr solutions containing no Zr. In digested uncontaminated soil samples after matrix separation as well as in a solution of 5 microg g(-1) Sr and 50 ng g(-1) Zr a detection limit of 0.2 pg g(-1) soil (1 Bq g(-1) soil) was determined. (90)Sr concentrations in three soil samples collected in the vicinity of the Chernobyl Nuclear Power Plant were 4.66+/-0.27, 13.48+/-0.68 and 12.9+/-1.5 pg g(-1) corresponding to specific activities of 23.7+/-1.3, 68.6+/-3.5 and 65.6+/-7.8 Bq g(-1), respectively. The ICP-DRC-MS results were compared to the activities measured earlier by radiometry. Although the ICP-DRC-MS is inferior to commonly used radiometric methods with respect to the achievable minimum detectable activity it represents a time- and cost-effective alternative technique for fast monitoring of high-level (90)Sr contamination in environmental or nuclear industrial samples down to activities of about 1 Bq g(-1).

Thermomagnetic identification of manganese and iron minerals present in soils and industrial dusts

NASA Astrophysics Data System (ADS)

Wawer, Małgorzata; Rachwał, Marzena; Jabłońska, Mariola; Krzykawski, Tomasz; Magiera, Tadeusz

2017-04-01

Many industries (e.g. metallurgy, power, cement, and coking plants) constitute a sources of industrial dusts containing technogenic magnetic particles (TMP). TMP are mostly iron oxides with ferrimagnetic or antiferromagnetic properties, therefore their presence in dusts, soils and sediments can be easily detected by magnetic susceptibility measurements. TMP, thanks their specific mineral and magnetic properties, and well developed specific surface area, are characterized by a chemical affinity for some elements like heavy metals. The main objective of this study was identification of manganese and iron (hydro)oxides occurring in industrial dusts and soils being under their deposition for long time period. In principle, Mn and Fe (hydro)oxides present in these samples originate from high-temperature technological processes. Soils samples (collected from different soil horizons) taken from surroundings of power station, iron/steel and non-ferrous plants as well as metallurgical dusts and fly ashes from power stations were subjected to investigation. During the studies temperature dependent magnetic susceptibility measurements and X-ray powder diffraction analyses were applied. Thermomagnetic analyses (K-T) revealed differences between samples from particular industries, however an inflexion at 450-500°C of all curves was observed indicating a probable occurrence of maghemite- or titanomagnetite-like phases. The curves of TMP emitted by power plants have inflection at 580 °C indicating that magnetite was the main magnetic phase. In case of TMP originated from non-ferrous metal smelting additional curve deflection at 130 and 210 °C occurred relating to intermediate titanomagnetite or iron sulfides. X-ray diffraction proved the occurrence of magnetite and maghemite in almost all samples, especially connected with power industry and iron/steel metallurgy. Mineral analysis revealed that kind of industrial process influenced on the dominating mineral forms found in polluted soils and specific industrial dusts. Fly ashes were composed mainly of anhydrite (2-46%), quartz (18-33%), muscovite (0-8%), feldspar (0-8%) and hematite (2-8%), while different spinels (19-53%), hematite (0-38%), wüstite (0-40%) and additives of calcite, halite, sylvine and graphite are the components of metallurgical dusts. Dusts from non-ferrous metal smelting contain Pb and Zn minerals: zincite (1-95%), lanarkite (0-45%), gordaite (0-10%), challacoloite and sphalerite. Additionally, some rare minerals were found in these dusts, such as: anglesite, sphalerite, galena, metasideronatrite and in soil, coronadite. Acknowledgements: The research project received funding from the National Science Centre of Poland on the basis of the decision number DEC-2013/09/B/ST10/02227.

Risk assessments of polybrominated diphenyl ethers (PBDEs) during sludge application in China

NASA Astrophysics Data System (ADS)

Qian, Jun

2018-02-01

Due to increasingly less space in municipal environment, waste management has become an urgent issue worldwide. As one of common municipal waste, sewage sludge from wastewater treatment plants (WWTPs) contains abundant nutrients, some of which can be quite essential for plant growth. In consideration of nutrient recycling and energy saving, sludge application has been frequently promoted in many countries across the world. However, even after several sludge stabilization procedures, sewage sludge may still contain a large variety of toxic pollutants, especially some emerging organic contaminants (EOCs). Applied in various household products and plastic industries as additives, polybrominated diphenyl ethers (PBDEs) have been constantly detected in sewage sludge samples from several cities in China since 2005, as well as some biosolid samples after sludge stabilization processes, suggesting their strong persistence and wide occurrence. During sludge application onto farmland soils, PBDEs may desorb from sludge particles and get attached by soil organic matter (SOM), followed by plant root uptake and translocation to aboveground tissues. In this study, data about current pollution of PBDEs in sewage sludge samples from China was reviewed, and the potential risks during sludge application was comprehensively assessed.

Chemical sensing thresholds for mine detection dogs

NASA Astrophysics Data System (ADS)

Phelan, James M.; Barnett, James L.

2002-08-01

Mine detection dogs have been found to be an effective method to locate buried landmines. The capabilities of the canine olfaction method are from a complex combination of training and inherent capacity of the dog for odor detection. The purpose of this effort was to explore the detection thresholds of a limited group of dogs that were trained specifically for landmine detection. Soils were contaminated with TNT and 2,4-DNT to develop chemical vapor standards to present to the dogs. Soils contained ultra trace levels of TNT and DNT, which produce extremely low vapor levels. Three groups of dogs were presented the headspace vapors from the contaminated soils in work environments for each dog group. One positive sample was placed among several that contained clean soils and, the location and vapor source (strength, type) was frequently changed. The detection thresholds for the dogs were determined from measured and extrapolated dilution of soil chemical residues and, estimated soil vapor values using phase partitioning relationships. The results showed significant variances in dog sensing thresholds, where some dogs could sense the lowest levels and others had trouble with even the highest source. The remarkable ultra-trace levels detectable by the dogs are consistent with the ultra-trace chemical residues derived from buried landmines; however, poor performance may go unnoticed without periodic challenge tests at levels consistent with performance requirements.

Experimental assessment of the microbocenosis stability in chemically polluted soils

NASA Astrophysics Data System (ADS)

Sorokin, N. D.; Grodnitskaya, I. D.; Shapchenkova, O. A.; Evgrafova, S. Yu.

2009-06-01

Water solutions of fluorine and sulfur-containing salts of sodium—NaF, Na2SO3, and NaF + Na2SO3 (30, 150, and 300 MPC, respectively)—and salts of heavy metals—(Cu(NO3)2 · 3H2O, NiSO4, and Pb(NO3)2 (10, 25, and 50 MPC, respectively)—were applied as pollutants to dark gray forest soils of experimental plots (1 m2) in Siberian larch ( Larix sibirica Ledeb.) plantations once per growing period. The soil samples for the determination of the microbial biomass, respiration, and enzymatic activity (urease, protease, invertase, and catalase) were taken from the mineral soil layer (0-5 cm) at the beginning of the growing seasons before the application of the pollutants then in 14- to 18-day intervals every month. The fluorine and sulfur-containing compounds applied activated the respiration, lowered the enzymatic activity of the microorganisms, and decreased the microbial biomass by 1.3-2.2 times in the soils of the test plots as compared to the control one. The single application of Cu, Ni, and Pb increased the microbial biomass, while the changes in the basal respiration were compatible with its natural variability. Two months after the beginning of the experiment, all the parameters characterizing the functioning of the soil microbocenoses were restored.

Synthetic Origin of Tramadol in the Environment.

PubMed

Kusari, Souvik; Tatsimo, Simplice Joel N; Zühlke, Sebastian; Spiteller, Michael

2016-01-04

The presence of tramadol in roots of Sarcocephalus latifolius trees in Northern Cameroon was recently attributed to point contamination with the synthetic compound. The synthetic origin of tramadol in the environment has now been unambiguously confirmed. Tramadol samples isolated from tramadol pills bought at a street market in downtown Maroua and highly contaminated soil at Houdouvou were analyzed by high-precision (14)C measurements by accelerator mass spectrometry ((14)C AMS): Tramadol from the pills did not contain any radiocarbon, thus indicating that it had been synthesized from (14)C-free petroleum-derived precursors. Crucially, tramadol isolated from the soil was also radiocarbon-free. As all biosynthetic plant compounds must contain radiocarbon levels close to that of the contemporary environment, these results thus confirm that tramadol isolated from the soil cannot be plant-derived. Analyses of S. latifolius seeds, in vitro grown plants, plants from different origins, and stable-isotope labeling experiments further confirmed that synthetic tramadol contaminates the environment. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Occurrence and sources of natural and anthropogenic lipid tracers in surface soils from arid urban areas of Saudi Arabia.

PubMed

Rushdi, Ahmed I; Al-Mutlaq, Khalid F; El-Mubarak, Aarif H; Al-Saleh, Mohammed A; El-Otaibi, Mubarak T; Ibrahim, Sami M M; Simoneit, Bernd R T

2016-01-01

Soil particles contain a variety of natural and anthropogenic organic components, and in urban areas can be considered as local collectors of pollutants. Surface soil samples were taken from ten urban areas in Riyadh during early winter of 2007. They were extracted with dichloromethane-methanol mixture and the extracts were analyzed by gas chromatography-mass spectrometry. The major compounds were unresolved complex mixture (UCM), plasticizers, n-alkanes, carbohydrates, n-alkanoic acids, hopanes, n-alkanols, and sterols. Vegetation detritus was the major natural source of organic compounds (24.0 ± 15.7%) in samples from areas with less human activities and included n-alkanes, n-alkanoic acids, n-alkanols, sterols and carbohydrates. Vehicular emission products and discarded plastics were the major anthropogenic sources in the soil particles (53.3 ± 21.3% and 22.7 ± 10.7%, respectively). The anthropogenic tracers were UCM, plasticizers, n-alkanes, hopanes and traces of steranes. Vegetation and human activities control the occurrence and distribution of natural and anthropogenic extractable organic matter in this arid urban area. Copyright © 2015 Elsevier Ltd. All rights reserved.

Sensitive PCR Detection of Meloidogyne arenaria, M. incognita, and M. javanica Extracted from Soil

PubMed Central

Qiu, Jinya Jack; Westerdahl, Becky B.; Anderson, Cindy; Williamson, Valerie M.

2006-01-01

We have developed a simple PCR assay protocol for detection of the root-knot nematode (RKN) species Meloidogyne arenaria, M. incognita, and M. javanica extracted from soil. Nematodes are extracted from soil using Baermann funnels and centrifugal flotation. The nematode-containing fraction is then digested with proteinase K, and a PCR assay is carried out with primers specific for this group of RKN and with universal primers spanning the ITS of rRNA genes. The presence of RKN J2 can be detected among large numbers of other plant-parasitic and free-living nematodes. The procedure was tested with several soil types and crops from different locations and was found to be sensitive and accurate. Analysis of unknowns and spiked soil samples indicated that detection sensitivity was the same as or higher than by microscopic examination. PMID:19259460

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ho, S.V.; Athmer, C.; Sheridan, P.W.

A novel, in situ remediation technology called Lasagna is being developed for cleaning up contamination in heterogeneous or low-permeability soils. The technology uses electrical current to drive contaminants from the soil into treatment zones installed directly in the contaminated area. The collaboration between a consortium of industry (Monsanto, DuPont, and General Electric) with the Department of Energy (DOE) and the Environmental Protection Agency (EPA) has led to two field tests at a DOE plant, chosen for its combination of low-permeability soil and trichloroethylene (TCE) as the sole contaminant. This paper describes the first field test in which TCE in themore » contaminated soil was transported into carbon-containing treatment zones where it was trapped. The test was very successful, removing over 98% TCE from the contaminated soil, with most treated samples showing greater than 99% removal. The success of this test paved the way for the second and much larger field test in which TCE was degraded in place.« less

Effect of biochar or activated carbon amendment on the volatilisation and biodegradation of organic soil pollutants

NASA Astrophysics Data System (ADS)

Werner, David; Meynet, Paola; Bushnaf, Khaled

2013-04-01

Biochar or activated carbon added to contaminated soil may temporarily reduce the volatilisation of organic pollutants by enhanced sorption. The long-term effect of sorbent amendments on the fate of volatile petroleum hydrocarbon mixtures (VPHs) will depend on the responses of the soil bacterial community members, especially those which may utilize VPHs as carbon substrates. We investigated the volatilisation and biodegradation of VPHs emanating from NAPL sources and migrating through one meter long columns containing unsaturated sandy soil with and without 2% biochar or activated carbon amendment. After 420 days, VPH volatilisation from AC amended soil was less than 10 percent of the cumulative VPH volatilisation flux from unamended soil. The cumulative CO2 volatilisation flux increased more slowly in AC amended soil, but was comparable to the untreated soil after 420 days. This indicated that the pollution attenuation over a 1 meter distance was improved by the AC amendment. Biochar was a weaker VPH sorbent than AC and had a lesser effect on the cumulative VPH and CO2 fluxes. We also investgated the predominant bacterial community responses in sandy soil to biochar and/or VPH addition with a factorially designed batch study, and by analyzing preserved soil samples. Biochar addition alone had only weak effects on soil bacterial communities, while VPH addition was a strong community structure shaping factor. The bacterial community effects of biochar-enhanced VPH sorption were moderated by the limited biomass carrying capacity of the sandy soil investigated which contained only low amounts of inorganic nitrogen. Several Pseudomonas spp., including Pseudomonas putida strains, became dominant in VPH polluted soil with and without biochar. The ability of these versatile VPH degraders to effectively regulate their metabolic pathways according to substrate availabilities may additionally have moderated bacterial community structure responses to the presence of biochar in VPH polluted soil.

Supercritical water oxidation of dioxins and furans in waste incinerator fly ash, sewage sludge and industrial soil.

PubMed

Zainal, Safari; Onwudili, Jude A; Williams, Paul T

2014-08-01

Three environmental samples containing dioxins and furans have been oxidized in the presence of hydrogen peroxide under supercritical water oxidation conditions. The samples consisted of a waste incinerator fly ash, sewage sludge and contaminated industrial soil. The reactor system was a batch, autoclave reactor operated at temperatures between 350 degrees C and 450degrees C, corresponding to pressures of approximately 20-33.5 MPa and with hydrogen peroxide concentrations from 0.0 to 11.25 vol%. Hydrogen peroxide concentration and temperature/pressure had a strong positive effect on the oxidation of dioxins and furans. At the highest temperatures and pressure of supercritical water oxidation of 4500C and 33.5 MPa and with 11.25 vol% of hydrogen peroxide, the destruction efficiencies of the individual polychlorinated dibenzo-p-dioxins/polychlorinated dibenzofurans (PCDD/PCDF) isomers were between 90% and 99%. There did not appear to be any significant differences in the PCDD/PCDF destruction efficiencies in relation to the different sample matrices of the waste incinerator fly ash, sewage sludge and contaminated industrial soil.