Natural radioactivity in soils of the state of Rio de Janeiro (Brazil): Radiological characterization and relationships to geological formation, soil types and soil properties.

PubMed

Ribeiro, F C A; Silva, J I R; Lima, E S A; do Amaral Sobrinho, N M B; Perez, D V; Lauria, D C

2018-02-01

Located in the south-western part of Brazil, the state of Rio de Janeiro is geotectonically contained within a complex structural province that resulted in the amalgamation of the Western Gondwana Paleocontinent. To undertake an extensive radiological characterization of this complex geological province and investigate the influence of bedrock, soil type and soil chemical-physical characteristics on natural radionuclide levels in soils, 259 surface soil samples were collected that encompassed the main soil types and geological formations throughout the state. Gamma spectrometry analysis of the samples resulted in median values of 114 Bq.kg -1 for 40 K, 32 Bq.kg -1 for 226 Ra and 74 Bq.kg -1 for 228 Ra. The median value for 226 Ra was similar to the world median value for soils, the 40 K value was well below the worldwide value, and that for 228 Ra exceeded the world median value. The intense weathering caused by the high rainfall rates and high temperatures may be responsible for the low levels of 40 K in the soils, of which the strongly acidic and clayey soils are markedly K-depleted. A soil from a high-grade metamorphic rock (granulite) presented the lowest 226 Ra (18 Bq.kg -1 ) content, whereas the highest levels for 226 Ra (92 Bq.kg -1 ) and 228 Ra (139 Bq.kg - 1) were observed in a young soil enriched in primary minerals (Leptsol). A lowland soil (Gleysol) showed the highest median of 40 K (301 Bq.kg -1 ). Strongly acidic soils tended to present high amounts of 226 Ra, and sandy soils tended to contain low levels of 228 Ra. The external radiation dose indicates that the state has a background radiation level within the natural range. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil water retention and plant growth response on the soil affected by continuous organic matter and plastic mulch application

NASA Astrophysics Data System (ADS)

Rasyid, B.; Oda, M.; Omae, H.

2018-05-01

Soil-water and plant growth interaction is a primary key to develop environmental plant production system. The objective of this research is to evaluate change in soil water retention characteristics and plant response as the effect of continuous organic matter and plastic mulch application. The experiment was conducted in the plastic house field with plot size of 5 m (length) x 1 m (width). The field had treatments of plastic mulch type (mesh and poly) and no mulch, nitrogen (0, 10 and 40 kg N ha-1), and 2 ton ha-1 organic matter (incorporated into all plots). Water retention measurement using sand box method for low suction and pressure plate apparatus was applied for high suction. Completely randomized block experimental design and Duncan-MRT were used to analysis the effect of treatment on the parameters. Soil organic carbon and nitrogen increased slightly in both mulch types, but C:N ratio decreased in poly mulch which had the lowest value during two planting season. Various change in soil water retention was shown in different mulch type with mesh mulch had the highest result on lower suction, and control was the lowest water retention on the high suction. Soil water availability was highest in mesh mulch type followed by control and poly mulch type. This study could conclude that continuous incorporation of organic matter and mesh-plastic mulch was useful in achieving environments to improve soil C:N ratio and soil water retention.

Land use type significantly affects microbial gene transcription in soil.

PubMed

Nacke, Heiko; Fischer, Christiane; Thürmer, Andrea; Meinicke, Peter; Daniel, Rolf

2014-05-01

Soil microorganisms play an essential role in sustaining biogeochemical processes and cycling of nutrients across different land use types. To gain insights into microbial gene transcription in forest and grassland soil, we isolated mRNA from 32 sampling sites. After sequencing of generated complementary DNA (cDNA), a total of 5,824,229 sequences could be further analyzed. We were able to assign nonribosomal cDNA sequences to all three domains of life. A dominance of bacterial sequences, which were affiliated to 25 different phyla, was found. Bacterial groups capable of aromatic compound degradation such as Phenylobacterium and Burkholderia were detected in significantly higher relative abundance in forest soil than in grassland soil. Accordingly, KEGG pathway categories related to degradation of aromatic ring-containing molecules (e.g., benzoate degradation) were identified in high abundance within forest soil-derived metatranscriptomic datasets. The impact of land use type forest on community composition and activity is evidently to a high degree caused by the presence of wood breakdown products. Correspondingly, bacterial groups known to be involved in lignin degradation and containing ligninolytic genes such as Burkholderia, Bradyrhizobium, and Azospirillum exhibited increased transcriptional activity in forest soil. Higher solar radiation in grassland presumably induced increased transcription of photosynthesis-related genes within this land use type. This is in accordance with high abundance of photosynthetic organisms and plant-infecting viruses in grassland.

Geological and geotechnical characteristics of Metro Manila volcanic soils and their suitability for landfill soil liner

NASA Astrophysics Data System (ADS)

Mendoza, Edna Patricia; Catane, Sandra; Pascua, Chelo; Zarco, Mark Albert

2010-05-01

Due to the Philippines's island-arc setting, andesitic tuff and volcanic ash constitute two-thirds of the country's agricultural land. In situ weathering of these volcanic sediments produces volcanic soils. Metro Manila volcanic soils were studied to determine their suitability for landfill soil liner. The soils were analyzed using XRD and XRF, and were tested for geotechnical properties. The results show the presence of the smectite group, a swelling variety of clay. The smectite-type clays are weathering products of volcanic glasses which are dominant components of the parental rocks. The high amounts of Al2O3 indicate an Al-rich type of soil. The clay species is either di- or tri-octahedral type, which points to montmorillonite as the main clay species. Swelling clay lowers the permeability of soils and reduces the infiltration and lateral movement of leachates in the ground. Also, geotechnical tests revealed moderate to high plasticity indices and low hydraulic conductivity values. The study shows that the physicochemical characteristics of volcanic soils meet the criteria for a soil liner for future sanitary landfill projects as mandated by RA 9003, a recently ratified solid waste management act of the Philippines. Being widespread, volcanic soils can be viewed as an important resource of the country.

Soil compaction vulnerability at Organ Pipe Cactus National Monument, Arizona

USGS Publications Warehouse

Webb, Robert H.; Nussear, Kenneth E.; Carmichael, Shinji; Esque, Todd C.

2014-01-01

Compaction vulnerability of different types of soils by hikers and vehicles is poorly known, particularly for soils of arid and semiarid regions. Engineering analyses have long shown that poorly sorted soils (for example, sandy loams) compact to high densities, whereas well-sorted soils (for example, eolian sand) do not compact, and high gravel content may reduce compaction. Organ Pipe Cactus National Monument (ORPI) in southwestern Arizona, is affected greatly by illicit activities associated with the United States–Mexico border, and has many soils that resource managers consider to be highly vulnerable to compaction. Using geospatial soils data for ORPI, compaction vulnerability was estimated qualitatively based on the amount of gravel and the degree of sorting of sand and finer particles. To test this qualitative assessment, soil samples were collected from 48 sites across all soil map units, and undisturbed bulk densities were measured. A scoring system was used to create a vulnerability index for soils on the basis of particle-size sorting, soil properties derived from Proctor compaction analyses, and the field undisturbed bulk densities. The results of the laboratory analyses indicated that the qualitative assessments of soil compaction vulnerability underestimated the area of high vulnerability soils by 73 percent. The results showed that compaction vulnerability of desert soils, such as those at ORPI, can be quantified using laboratory tests and evaluated using geographic information system analyses, providing a management tool that managers potentially could use to inform decisions about activities that reduce this type of soil disruption in protected areas.

Impact of soil water regime on degradation and plant uptake behaviour of the herbicide isoproturon in different soil types.

PubMed

Grundmann, Sabine; Doerfler, Ulrike; Munch, Jean Charles; Ruth, Bernhard; Schroll, Reiner

2011-03-01

The environmental fate of the worldwide used herbicide isoproturon was studied in four different, undisturbed lysimeters in the temperate zone of Middle Europe. To exclude climatic effects due to location, soils were collected at different regions in southern Germany and analyzed at a lysimeter station under identical environmental conditions. (14)C-isoproturon mineralization varied between 2.59% and 57.95% in the different soils. Barley plants grown on these lysimeters accumulated (14)C-pesticide residues from soil in partially high amounts and emitted (14)CO(2) in an extent between 2.01% and 13.65% of the applied (14)C-pesticide. Plant uptake and (14)CO(2) emissions from plants were inversely linked to the mineralization of the pesticide in the various soils: High isoproturon mineralization in soil resulted in low plant uptake whereas low isoproturon mineralization in soil resulted in high uptake of isoproturon residues in crop plants and high (14)CO(2) emission from plant surfaces. The soil water regime was identified as an essential factor that regulates degradation and plant uptake of isoproturon whereby the intensity of the impact of this factor is strongly dependent on the soil type. Copyright © 2010 Elsevier Ltd. All rights reserved.

Soil fertility controls soil-atmosphere carbon dioxide and methane fluxes in a tropical landscape converted from lowland forest to rubber and oil palm plantations

NASA Astrophysics Data System (ADS)

Hassler, E.; Corre, M. D.; Tjoa, A.; Damris, M.; Utami, S. R.; Veldkamp, E.

2015-10-01

Expansion of palm oil and rubber production, for which global demand is increasing, causes rapid deforestation in Sumatra, Indonesia, and is expected to continue in the next decades. Our study aimed to (1) quantify changes in soil CO2 and CH4 fluxes with land-use change and (2) determine their controlling factors. In Jambi Province, Sumatra, we selected two landscapes on heavily weathered soils that differ mainly in texture: loam and clay Acrisol soils. In each landscape, we investigated the reference land-use types (forest and secondary forest with regenerating rubber) and the converted land-use types (rubber, 7-17 years old, and oil palm plantations, 9-16 years old). We measured soil CO2 and CH4 fluxes monthly from December 2012 to December 2013. Annual soil CO2 fluxes from the reference land-use types were correlated with soil fertility: low extractable phosphorus (P) coincided with high annual CO2 fluxes from the loam Acrisol soil that had lower fertility than the clay Acrisol soil (P < 0.05). Soil CO2 fluxes from the oil palm (107.2 to 115.7 mg C m-2 h-1) decreased compared to the other land-use types (between 178.7 and 195.9 mg C m-2 h-1; P < 0.01). Across land-use types, annual CO2 fluxes were positively correlated with soil organic carbon (C) and negatively correlated with 15N signatures, extractable P and base saturation. This suggests that the reduced soil CO2 fluxes from oil palm were the result of strongly decomposed soil organic matter and reduced soil C stocks due to reduced litter input as well as being due to a possible reduction in C allocation to roots due to improved soil fertility from liming and P fertilization in these plantations. Soil CH4 uptake in the reference land-use types was negatively correlated with net nitrogen (N) mineralization and soil mineral N, suggesting N limitation of CH4 uptake, and positively correlated with exchangeable aluminum (Al), indicating a decrease in methanotrophic activity at high Al saturation. Reduction in soil CH4 uptake in the converted land-use types (ranging from -3.0 to -14.9 μg C m-2 h-1) compared to the reference land-use types (ranging from -20.8 to -40.3 μg C m-2 h-1; P < 0.01) was due to a decrease in soil N availability in the converted land-use types. Our study shows for the first time that differences in soil fertility control the soil-atmosphere exchange of CO2 and CH4 in a tropical landscape, a mechanism that we were able to detect by conducting this study on the landscape scale.

A universal method to assess the potential of phosphorus loss from soil to aquatic ecosystems.

PubMed

Pöthig, Rosemarie; Behrendt, Horst; Opitz, Dieter; Furrer, Gerhard

2010-02-01

Phosphorus loss from terrestrial to the aquatic ecosystems contributes to eutrophication of surface waters. To maintain the world's vital freshwater ecosystems, the reduction of eutrophication is crucial. This needs the prevention of overfertilization of agricultural soils with phosphorus. However, the methods of risk assessment for the P loss potential from soils lack uniformity and are difficult for routine analysis. Therefore, the efficient detection of areas with a high risk of P loss requires a simple and universal soil test method that is cost effective and applicable in both industrialized and developing countries. Soils from areas which varied highly in land use and soil type were investigated regarding the degree of P saturation (DPS) as well as the equilibrium P concentration (EPC(0)) and water-soluble P (WSP) as indicators for the potential of P loss. The parameters DPS and EPC(0) were determined from P sorption isotherms. Our investigation of more than 400 soil samples revealed coherent relationships between DPS and EPC(0) as well as WSP. The complex parameter DPS, characterizing the actual P status of soil, is accessible from a simple standard measurement of WSP based on the equation [Formula: see text]. The parameter WSP in this equation is a function of remaining phosphorous sorption capacity/total accumulated phosphorous (SP/TP). This quotient is independent of soil type due to the mutual compensation of the factors SP and TP. Thus, the relationship between DPS and WSP is also independent of soil type. The degree of P saturation, which reflects the actual state of P fertilization of soil, can be calculated from the easily accessible parameter WSP. Due to the independence from soil type and land use, the relation is valid for all soils. Values of WSP, which exceed 5 mg P/kg soil, signalize a P saturation between 70% and 80% and thus a high risk of P loss from soil. These results reveal a new approach of risk assessment for P loss from soils to surface and ground waters. The consequent application of this method may globally help to save the vital resources of our terrestrial and aquatic ecosystems.

Differences in hydrological responses for different vegetation types on a steep slope on the Loess Plateau, China

NASA Astrophysics Data System (ADS)

Duan, Liangxia; Huang, Mingbin; Zhang, Luodan

2016-06-01

Extensive vegetation restoration practices have been implemented to control soil erosion on the Loess Plateau, China. However, no strict guidelines are available to determine the most suitable plant species for vegetation restoration within a given area. The objective of this study was to quantify the changes of each component (soil water storage, surface runoff, and actual evapotranspiration) of a water balance model and soil loss over time under eight different vegetation types, and to further determine the optimal vegetation type for soil and water conservation and sustainable ecological restoration on the steep slopes (>25°) on the Loess Plateau. The results indicated that vegetation type substantially affected soil water storage and that the greatest soil water storage in both the shallow (0-2 m) and the deep soil layers (2-5 m) occurred under Bothriochloa ischaemum L. (BOI). Vegetation type also affected surface runoff and soil losses. The most effective vegetation types for reducing soil erosion were BOI and Sea-buckthorn (Hippophae rhamnoides L.), while Chinese pine (Pinus tabulaeformis Carr.) and Chinese pine + Black locust (Robinia pseudoacacia L.) were the most ineffective types. Soil water dynamics and evapotranspiration varied considerably among the different vegetation types. A soil water surplus was only found under BOI, while insufficient water replenishment existed under the other seven vegetation types. The higher water consumption rates of the seven vegetation types could result in soil desiccation, which could lead to severe water stresses that would adversely affect plant growth. This study suggested that both vegetation type and its effect on controlling soil erosion should be considered when implementing vegetation restoration and that BOI should be highly recommended for vegetation restoration on the steep slopes of the Loess Plateau. A similar approach to the one used in this study could be applied to other regions of the world confronted by the same problems of water scarcity along with the need for vegetation restoration.

Plant selection and soil legacy enhance long-term biodiversity effects.

PubMed

Zuppinger-Dingley, Debra; Flynn, Dan F B; De Deyn, Gerlinde B; Petermann, Jana S; Schmid, Bernhard

2016-04-01

Plant-plant and plant-soil interactions can help maintain plant diversity and ecosystem functions. Changes in these interactions may underlie experimentally observed increases in biodiversity effects over time via the selection of genotypes adapted to low or high plant diversity. Little is known, however, about such community-history effects and particularly the role of plant-soil interactions in this process. Soil-legacy effects may occur if co-evolved interactions with soil communities either positively or negatively modify plant biodiversity effects. We tested how plant selection and soil legacy influence biodiversity effects on productivity, and whether such effects increase the resistance of the communities to invasion by weeds. We used two plant selection treatments: parental plants growing in monoculture or in mixture over 8 yr in a grassland biodiversity experiment in the field, which we term monoculture types and mixture types. The two soil-legacy treatments used in this study were neutral soil inoculated with live or sterilized soil inocula collected from the same plots in the biodiversity experiment. For each of the four factorial combinations, seedlings of eight species were grown in monocultures or four-species mixtures in pots in an experimental garden over 15 weeks. Soil legacy (live inoculum) strongly increased biodiversity complementarity effects for communities of mixture types, and to a significantly weaker extent for communities of monoculture types. This may be attributed to negative plant-soil feedbacks suffered by mixture types in monocultures, whereas monoculture types had positive plant-soil feedbacks, in both monocultures and mixtures. Monocultures of mixture types were most strongly invaded by weeds, presumably due to increased pathogen susceptibility, reduced biomass, and altered plant-soil interactions of mixture types. These results show that biodiversity effects in experimental grassland communities can be modified by the evolution of positive vs. negative plant-soil feedbacks of plant monoculture vs. mixture types.

Impact of Plant Functional Types on Coherence Between Precipitation and Soil Moisture: A Wavelet Analysis

NASA Astrophysics Data System (ADS)

Liu, Qi; Hao, Yonghong; Stebler, Elaine; Tanaka, Nobuaki; Zou, Chris B.

2017-12-01

Mapping the spatiotemporal patterns of soil moisture within heterogeneous landscapes is important for resource management and for the understanding of hydrological processes. A critical challenge in this mapping is comparing remotely sensed or in situ observations from areas with different vegetation cover but subject to the same precipitation regime. We address this challenge by wavelet analysis of multiyear observations of soil moisture profiles from adjacent areas with contrasting plant functional types (grassland, woodland, and encroached) and precipitation. The analysis reveals the differing soil moisture patterns and dynamics between plant functional types. The coherence at high-frequency periodicities between precipitation and soil moisture generally decreases with depth but this is much more pronounced under woodland compared to grassland. Wavelet analysis provides new insights on soil moisture dynamics across plant functional types and is useful for assessing differences and similarities in landscapes with heterogeneous vegetation cover.

Influence of elk grazing on soil properties in Rocky Mountain National Park

USGS Publications Warehouse

Binkley, Dan; Singer, F.; Kaye, M.; Rochelle, R.

2003-01-01

We used three 35-year exclosures to examine the effects of high elk populations on a variety of soil properties in three vegetation types: upland sagebrush, aspen, and meadow. Grazing and hoof action by elk significantly increased bulk density (from 0.87 kg/l ungrazed to 0.94 kg/l grazed), with greater effects on soils with fewer rocks. Grazing substantially reduced extractable calcium, magnesium, potassium and phosphorus in the sagebrush type, but not in the aspen or meadow types. The only grazing effect on pH came in aspen types, where grazing prevented aspen establishment, and kept soil pH about 0.7 units higher than under aspen inside the exclosures. Grazing had no overall effect on total soil C and N across all exclosures and vegetation types. The availability of soil nitrogen, indexed by in-field resin bags and net mineralization in soil cores, showed little overall effect of grazing. Limited data on soil leaching indicated a possibility of strong increases in nitrate leaching with grazing for an aspen vegetation type at one exclosure. Although we found little effect of grazing on soil N supply, we note that N fertilization doubled the production of grasses and shrubs; if grazing eventually led to changes in soil N supply, species composition and growth would likely change. ?? 2003 Elsevier B.V. All rights reserved.

Analysis of volatile organic compound from Elaeis guineensis inflorescences planted on different soil types in Malaysia

NASA Astrophysics Data System (ADS)

Muhamad Fahmi, M. H.; Ahmad Bukhary, A. K.; Norma, H.; Idris, A. B.

2016-11-01

The main attractant compound for Eleidobius kamerunicus to male spikelet Elaeis guineensis (oil palm) were determined by analyzing volatile organic compound extracted from E. guineenses inflorescences planted on different soil types namely peat soil, clay soil and sandy soil. Anthesizing male oil palm inflorescences were randomly choosen from palm aged between 4-5 years old age. Extraction of the volatiles from the oil palm inflorescences were performed by Accelerated Solvent Extraction method (ASE). The extracted volatile compound were determined by using gas chromatography-mass spectrometry. Out of ten identified compound, estragole was found to be a major compound in sandy soil (37.49%), clay soil (30.71%) and peat soil (27.79%). Other compound such as 9,12-octadecadieonic acid and n-hexadecanoic acid were found as major compound in peat soil (27.18%) and (7.45%); sandy soil (14.15 %) and (9.31%); and clay soil (30.23%) and (4.99%). This study shows that estragole was the predominant volatile compound detected in oil palm inflorescences with highly concentrated in palm planted in sandy soil type.

Assessing the humus status and CO2 production in soils of anthropogenic and agrogenic landscapes in southern regions of the Russian Far East

NASA Astrophysics Data System (ADS)

Purtova, L. N.; Kostenkov, N. M.; Shchapova, L. N.

2017-01-01

The humus status and CO2 production have been assessed in soils of natural and anthropogenic landscapes in southern regions of the Far East with different types of redox conditions. A higher production of CO2 is typical of burozems and soddy-eluvial-metamorphic soils with oxidative and contrast redox conditions. These are soils with medium or high humus content, high potential humification capacity, and medium enrichment with catalase. A decrease in the content of humus in the plow horizons of soils in agrogenic landscapes is revealed compared to their natural analogues. The studied soils mainly have humus of the fulvate-humate type. The fractions strongly bound to the mineral soil component prevail in humic acids. In waterlogged mucky-humus gley soils, the anaerobic conditions hamper the biological activity and transformation of organic matter, which favors its accumulation. A low production of CO2 is observed in soils with reducing conditions. To determine the differences between the CO2 emission parameters in soils of agrogenic and natural landscapes, monitoring studies should be extended.

Ectomycorrhizal fungal diversity associated with endemic Tristaniopsis spp. (Myrtaceae) in ultramafic and volcano-sedimentary soils in New Caledonia.

PubMed

Waseem, Muhammad; Ducousso, Marc; Prin, Yves; Domergue, Odile; Hannibal, Laure; Majorel, Clarisse; Jourand, Philippe; Galiana, Antoine

2017-05-01

New Caledonian serpentine (ultramafic) soils contain high levels of toxic heavy metals, in particular nickel, (up to 20 g kg -1 ) and are deficient in essential elements like carbon, nitrogen and phosphorus while having a high magnesium/calcium ratio. Although previous studies showed that ectomycorrhizal symbioses could play an important role in the adaptation of the endemic plants to ultramafic soils (FEMS Microbiol Ecol 72:238-49, 2010), none of them have compared the diversity of microbial communities from ultramafic vs non-ultramafic soils in New Caledonia. We explored the impact of edaphic characteristics on the diversity of ectomycorrhizal (ECM) fungi associated with different endemic species of Tristaniopsis (Myrtaceae) growing under contrasting soil conditions in the natural ecosystems of New Caledonia. ECM root tips were thus sampled from two different ultramafic sites (Koniambo massif and Desmazures forest) vs two volcano-sedimentary ones (Arama and Mont Ninndo). The molecular characterization of the ECM fungi through partial sequencing of the ITS rRNA gene revealed the presence of different dominant fungal genera including, both soil types combined, Cortinarius (36.1%), Pisolithus (18.5%), Russula (13.4%), Heliotales (8.2%) and Boletellus (7.2%). A high diversity of ECM taxa associated with Tristaniopsis species was found in both ultramafic and volcano-sedimentary soils but no significant differences in ECM genera distribution were observed between both soil types. No link could be established between the phylogenetic clustering of ECM taxa and their soil type origin, thus suggesting a possible functional-rather than taxonomical-adaptation of ECM fungal communities to ultramafic soils.

Effect of soil type and moisture availability on the foraging behavior of the Formosan subterranean termite (Isoptera: Rhinotermitidae).

PubMed

Cornelius, Mary L; Osbrink, Weste L A

2010-06-01

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and shelter tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termites built shelter tubes on the sides of the containers. In containers with sand, termites built shelter tubes directly into the air and covered the sides of the container with a layer of sand. The interaction of soil type and moisture availability affected termite movement, feeding, and survival. In assays with moist soils, termites were more likely to aggregate in top soil over potting soil and peat moss. However, termites were more likely to move into containers with dry peat moss and potting soil than containers with dry sand and clay. Termites were also significantly more likely to move into containers with dry potting soil than dry top soil. In the assay with dry soils, termite mortality was high even though termites were able to travel freely between moist sand and dry soil, possibly due to desiccation caused by contact with dry soil. Evaporation from potting soil and peat moss resulted in significant mortality, whereas termites were able to retain enough moisture in top soil, sand, and clay to survive for 25 d. The interaction of soil type and moisture availability influences the distribution of foraging termites in microhabitats.

Vegetation and climate controls on potential CO2, DOC and DON production in northern latitude soils

USGS Publications Warehouse

Neff, J.C.; Hooper, D.U.

2002-01-01

Climatic change may influence decomposition dynamics in arctic and boreal ecosystems, affecting both atmospheric CO2 levels, and the flux of dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) to aquatic systems. In this study, we investigated landscape-scale controls on potential production of these compounds using a one-year laboratory incubation at two temperatures (10?? and 30??C). We measured the release of CO2, DOC and DON from tundra soils collected from a variety of vegetation types and climatic regimes: tussock tundra at four sites along a latitudinal gradient from the interior to the north slope of Alaska, and soils from additional vegetation types at two of those sites (upland spruce at Fairbanks, and wet sedge and shrub tundra at Toolik Lake in northern Alaska). Vegetation type strongly influenced carbon fluxes. The highest CO2 and DOC release at the high incubation temperature occurred in the soils of shrub tundra communities. Tussock tundra soils exhibited the next highest DOC fluxes followed by spruce and wet sedge tundra soils, respectively. Of the fluxes, CO2 showed the greatest sensitivity to incubation temperatures and vegetation type, followed by DOC. DON fluxes were less variable. Total CO2 and total DOC release were positively correlated, with DOC fluxes approximately 10% of total CO2 fluxes. The ratio of CO2 production to DOC release varied significantly across vegetation types with Tussock soils producing an average of four times as much CO2 per unit DOC released compared to Spruce soils from the Fairbanks site. Sites in this study released 80-370 mg CO2-C g soil C-1 and 5-46 mg DOC g soil C-1 at high temperatures. The magnitude of these fluxes indicates that arctic carbon pools contain a large proportion of labile carbon that could be easily decomposed given optimal conditions. The size of this labile pool ranged between 9 and 41% of soil carbon on a g soil C basis, with most variation related to vegetation type rather than climate.

Spatial trends and pollution assessment for mercury in the surface soils of the Nansi Lake catchment, China.

PubMed

Ren, Ming-Yi; Yang, Li-Yuan; Wang, Long-Feng; Han, Xue-Mei; Dai, Jie-Rui; Pang, Xu-Gui

2018-01-01

Surface soil samples collected from Nansi Lake catchment were analyzed for mercury (Hg) to determine its spatial trends and environmental impacts. Results showed that the average soil Hg contents were 0.043 mg kg -1 . A positive correlation was shown between TOC and soil Hg contents. The main type of soil with higher TOC contents and lower pH values showed higher soil Hg contents. Soil TOC contents and CV values were both higher in the eastern catchment. The eastern part of the catchment, where the industry is developed, had relatively high soil Hg contents and a banding distribution of high Hg contents was corresponded with the southwest-northeast economic belt. Urban soils had higher Hg contents than rural soils. The urbanization pattern that soil Hg contents presented a decreasing trend from city center to suburb was shown clearly especially in the three cities. Soil Hg contents in Jining City showed a good consistency with the urban land expansion. The spatial trends of soil Hg contents in the catchment indicated that the type and the intensity of human activities have a strong influence on the distribution of Hg in soils. Calculated risk indices showed that the western part of the catchment presented moderately polluted condition and the eastern part of the catchment showed moderate to strong pollution level. The area with high ecological risk appeared mainly along the economic belt.

Trace element biogeochemistry in the soil-water-plant system of a temperate agricultural soil amended with different biochars.

PubMed

Kloss, Stefanie; Zehetner, Franz; Buecker, Jannis; Oburger, Eva; Wenzel, Walter W; Enders, Akio; Lehmann, Johannes; Soja, Gerhard

2015-03-01

Various biochar (BC) types have been investigated as soil amendment; however, information on their effects on trace element (TE) biogeochemistry in the soil-water-plant system is still scarce. In the present study, we determined aqua-regia (AR) and water-extractable TEs of four BC types (woodchips (WC), wheat straw (WS), vineyard pruning (VP), pyrolyzed at 525 °C, of which VP was also pyrolyzed at 400 °C) and studied their effects on TE concentrations in leachates and mustard (Sinapis alba L.) tissue in a greenhouse pot experiment. We used an acidic, sandy agricultural soil and a BC application rate of 3% (w/w). Our results show that contents and extractability of TEs in the BCs and effectuated changes of TE biogeochemistry in the soil-water-plant system strongly varied among the different BC types. High AR-digestable Cu was found in VP and high B contents in WC. WS had the highest impact on TEs in leachates showing increased concentrations of As, Cd, Mo, and Se, whereas WC application resulted in enhanced leaching of B. All BC types increased Mo and decreased Cu concentrations in the plant tissue; however, they showed diverging effects on Cu in the leachates with decreased concentrations for WC and WS, but increased concentrations for both VPs. Our results demonstrate that BCs may release TEs into the soil-water-plant system. A BC-induced liming effect in acidic soils may lead to decreased plant uptake of cationic TEs, including Pb and Cd, but may enhance the mobility of anionic TEs like Mo and As. We also found that BCs with high salt contents (e.g., straw-based BCs) may lead to increased mobility of both anionic and cationic TEs in the short term.

Habitat complexity influences fine scale hydrological processes and the incidence of stormwater runoff in managed urban ecosystems.

PubMed

Ossola, Alessandro; Hahs, Amy Kristin; Livesley, Stephen John

2015-08-15

Urban ecosystems have traditionally been considered to be pervious features of our cities. Their hydrological properties have largely been investigated at the landscape scale and in comparison with other urban land use types. However, hydrological properties can vary at smaller scales depending upon changes in soil, surface litter and vegetation components. Management practices can directly and indirectly affect each of these components and the overall habitat complexity, ultimately affecting hydrological processes. This study aims to investigate the influence that habitat components and habitat complexity have upon key hydrological processes and the implications for urban habitat management. Using a network of urban parks and remnant nature reserves in Melbourne, Australia, replicate plots representing three types of habitat complexity were established: low-complexity parks, high-complexity parks, and high-complexity remnants. Saturated soil hydraulic conductivity in low-complexity parks was an order of magnitude lower than that measured in the more complex habitat types, due to fewer soil macropores. Conversely, soil water holding capacity in low-complexity parks was significantly higher compared to the two more complex habitat types. Low-complexity parks would generate runoff during modest precipitation events, whereas high-complexity parks and remnants would be able to absorb the vast majority of rainfall events without generating runoff. Litter layers on the soil surface would absorb most of precipitation events in high-complexity parks and high-complexity remnants. To minimize the incidence of stormwater runoff from urban ecosystems, land managers could incrementally increase the complexity of habitat patches, by increasing canopy density and volume, preserving surface litter and maintaining soil macropore structure. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Effect of different soil types on the remediation of copper-pyrene compound contaminated soils by EK-oxidation process].

PubMed

Fan, Guang-Ping; Cang, Long; Zhou, Dong-Mei; Zhou, Li-Xiang

2011-11-01

The effect of different soil types (red soil,yellow-brown soil and black soil) on the electrokinetic (EK)-oxidation remediation of heavy metals-organic pollutant contaminated soil was studied in laboratory-scale experiments. Copper and pyrene were chosen as model pollutant, and 12% H2O2, 10% hydroxypropyl-beta-cyclodextrin and 0.01 mol x L(-1) NaNO3 solution were added into the anode and cathode cell. The applied voltage was 1 V x cm(-1). After 15 days of EK remediation, the removal rate of pyrene and copper in red soil, yellow-brown soil and black soil were 38.5%, 46.8%, 51.3% for pyrene and 85.0%, 22.6%, 24.1% for Cu, respectively. The high pH of black soil produced high electroosmotic flow and increased the exposure of oxidants and pollutants, meanwhile the low clay content was also conducive to the desorption of pyrene. The low pH and organic matter of red soil affected the chemical species distribution of Cu and increased its removal rate. It is concluded that soil pH, clay content and heavy metal speciation in soil are the dominant factors affecting the migration and removal efficiency of pollutants.

Impact of Land Use Management and Soil Properties on Denitrifier Communities of Namibian Savannas.

PubMed

Braker, Gesche; Matthies, Diethart; Hannig, Michael; Brandt, Franziska Barbara; Brenzinger, Kristof; Gröngröft, Alexander

2015-11-01

We studied potential denitrification activity and the underlying denitrifier communities in soils from a semiarid savanna ecosystem of the Kavango region in NE Namibia to help in predicting future changes in N(2)O emissions due to continuing changes of land use in this region. Soil type and land use (pristine, fallow, and cultivated soils) influenced physicochemical characteristics of the soils that are relevant to denitrification activity and N(2)O fluxes from soils and affected potential denitrification activity. Potential denitrification activity was assessed by using the denitrifier enzyme activity (DEA) assay as a proxy for denitrification activity in the soil. Soil type and land use influenced C and N contents of the soils. Pristine soils that had never been cultivated had a particularly high C content. Cultivation reduced soil C content and the abundance of denitrifiers and changed the composition of the denitrifier communities. DEA was strongly and positively correlated with soil C content and was higher in pristine than in fallow or recently cultivated soils. Soil type and the composition of both the nirK- and nirS-type denitrifier communities also influenced DEA. In contrast, other soil characteristics like N content, C:N ratio, and pH did not predict DEA. These findings suggest that due to greater availability of soil organic matter, and hence a more effective N cycling, the natural semiarid grasslands emit more N(2)O than managed lands in Namibia.

Broccoli/weed/soil discrimination by optical reflectance using neural networks

NASA Astrophysics Data System (ADS)

Hahn, Federico

1995-04-01

Broccoli is grown extensively in Scotland, and has become one of the main vegetables cropped, due to its high yields and profits. Broccoli, weed and soil samples from 6 different farms were collected and their spectra obtained and analyzed using discriminant analysis. High crop/weed/soil discrimination success rates were encountered in each farm, but the selected wavelengths varied in each farm due to differences in broccoli variety, weed species incidence and soil type. In order to use only three wavelengths, neural networks were introduced and high crop/weed/soil discrimination accuracies for each farm were achieved.

Parental material and cultivation determine soil bacterial community structure and fertility.

PubMed

Sun, Li; Gao, Jusheng; Huang, Ting; Kendall, Joshua R A; Shen, Qirong; Zhang, Ruifu

2015-01-01

Microbes are the key components of the soil environment, playing important roles during soil development. Soil parent material provides the foundation elements that comprise the basic nutritional environment for the development of microbial community. After 30 years artificial maturation of cultivation, the soil developments of three different parental materials were evaluated and bacterial community compositions were investigated using the high-throughput sequencing approach. Thirty years of cultivation increased the soil fertility and soil microbial biomass, richness and diversity, greatly changed the soil bacterial communities, the proportion of phylum Actinobacteria decreased significantly, while the relative abundances of the phyla Acidobacteria, Chloroflexi, Gemmatimonadetes, Armatimonadetes and Nitrospira were significantly increased. Soil bacterial communities of parental materials were separated with the cultivated ones, and comparisons of different soil types, granite soil and quaternary red clay soil were similar and different with purple sandy shale soil in both parental materials and cultivated treatments. Bacterial community variations in the three soil types were affected by different factors, and their alteration patterns in the soil development also varied with soil type. Soil properties (except total potassium) had a significant effect on the soil bacterial communities in all three soil types and a close relationship with abundant bacterial phyla. The amounts of nitrogen-fixing bacteria as well as the abundances of the nifH gene in all cultivated soils were higher than those in the parental materials; Burkholderia and Rhizobacte were enriched significantly with long-term cultivation. The results suggested that crop system would not deplete the nutrients of soil parental materials in early stage of soil maturation, instead it increased soil fertility and changed bacterial community, specially enriched the nitrogen-fixing bacteria to accumulate nitrogen during soil development. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Vertical patterns and controls of soil nutrients in alpine grassland: Implications for nutrient uptake.

PubMed

Tian, Liming; Zhao, Lin; Wu, Xiaodong; Fang, Hongbing; Zhao, Yonghua; Yue, Guangyang; Liu, Guimin; Chen, Hao

2017-12-31

Vertical patterns and determinants of soil nutrients are critical to understand nutrient cycling in high-altitude ecosystems; however, they remain poorly understood in the alpine grassland due to lack of systematic field observations. In this study, we examined vertical distributions of soil nutrients and their influencing factors within the upper 1m of soil, using data of 68 soil profiles surveyed in the alpine grassland of the eastern Qinghai-Tibet Plateau. Soil organic carbon (SOC) and total nitrogen (TN) stocks decreased with depth in both alpine meadow (AM) and alpine steppe (AS), but remain constant along the soil profile in alpine swamp meadow (ASM). Total phosphorus, Ca 2+ , and Mg 2+ stocks slightly increased with depth in ASM. K + stock decreased with depth, while Na + stock increased slightly with depth among different vegetation types; however, SO 4 2- and Cl - stocks remained relatively uniform throughout different depth intervals in the alpine grassland. Except for SOC and TN, soil nutrient stocks in the top 20cm soils were significantly lower in ASM compared to those in AM and AS. Correlation analyses showed that SOC and TN stocks in the alpine grassland positively correlated with vegetation coverage, soil moisture, clay content, and silt content, while they negatively related to sand content and soil pH. However, base cation stocks revealed contrary relationships with those environmental variables compared to SOC and TN stocks. These correlations varied between vegetation types. In addition, no significant relationship was detected between topographic factors and soil nutrients. Our findings suggest that plant cycling and soil moisture primarily control vertical distributions of soil nutrients (e.g. K) in the alpine grassland and highlight that vegetation types in high-altitude permafrost regions significantly affect soil nutrients. Copyright © 2017 Elsevier B.V. All rights reserved.

Temporal changes in soil C-N-P stoichiometry over the past 60 years across subtropical China.

PubMed

Yu, Zaipeng; Wang, Minhuang; Huang, Zhiqun; Lin, Teng-Chiu; Vadeboncoeur, Matthew A; Searle, Eric B; Chen, Han Y H

2018-03-01

Controlled experiments have shown that global changes decouple the biogeochemical cycles of carbon (C), nitrogen (N), and phosphorus (P), resulting in shifting stoichiometry that lies at the core of ecosystem functioning. However, the response of soil stoichiometry to global changes in natural ecosystems with different soil depths, vegetation types, and climate gradients remains poorly understood. Based on 2,736 observations along soil profiles of 0-150 cm depth from 1955 to 2016, we evaluated the temporal changes in soil C-N-P stoichiometry across subtropical China, where soils are P-impoverished, with diverse vegetation, soil, and parent material types and a wide range of climate gradients. We found a significant overall increase in soil total C concentration and a decrease in soil total P concentration, resulting in increasing soil C:P and N:P ratios during the past 60 years across all soil depths. Although average soil N concentration did not change, soil C:N increased in topsoil while decreasing in deeper soil. The temporal trends in soil C-N-P stoichiometry differed among vegetation, soil, parent material types, and spatial climate variations, with significantly increased C:P and N:P ratios for evergreen broadleaf forest and highly weathered Ultisols, and more pronounced temporal changes in soil C:N, N:P, and C:P ratios at low elevations. Our sensitivity analysis suggests that the temporal changes in soil stoichiometry resulted from elevated N deposition, rising atmospheric CO 2 concentration and regional warming. Our findings revealed that the responses of soil C-N-P and stoichiometry to long-term global changes have occurred across the whole soil depth in subtropical China and the magnitudes of the changes in soil stoichiometry are dependent on vegetation types, soil types, and spatial climate variations. © 2017 John Wiley & Sons Ltd.

Relationships between soil erosion risk, soil use and soil properties in Mediterranean areas. A comparative study of three typical sceneries

NASA Astrophysics Data System (ADS)

Gil, Juan; Priego-Navas, Mercedes; Zavala, Lorena M.; Jordán, Antonio

2013-04-01

Generally, literature shows that the high variability of rainfall-induced soil erosion is related to climatic differences, relief, soil properties and land use. Very different runoff rates and soil loss values have been reported in Mediterranean cropped soils depending on soil management practices, but also in soils under natural vegetation types. OBJECTIVES The aim of this research is to study the relationships between soil erosion risk, soil use and soil properties in three typical Mediterranean areas from southern Spain: olive groves under conventional tillage, minimum tillage and no-till practices, and soils under natural vegetation. METHODS Rainfall simulation experiments have been carried out in order to assess the relationship between soil erosion risk, land use, soil management and soil properties in olive-cropped soils under different types of management and soils under natural vegetation type from Mediterranean areas in southern Spain RESULTS Results show that mean runoff rates decrease from 35% in olive grove soils under conventional tillage to 25% in olive (Olea europaea) grove soils with minimum tillage or no-till practices, and slightly over 22% in soils under natural vegetation. Moreover, considering the different vegetation types, runoff rates vary in a wide range, although runoff rates from soils under holm oak (Quercus rotundifolia), 25.70%, and marginal olive groves , 25.31%, are not significantly different. Results from soils under natural vegetation show that the properties and nature of the organic residues play a role in runoff characteristics, as runoff rates above 50% were observed in less than 10% of the rainfall simulations performed on soils with a organic layer. In contrast, more than half of runoff rates from bare soils reached or surpassed 50%. Quantitatively, average values for runoff water losses increase up to 2.5 times in unprotected soils. This is a key issue in the study area, where mean annual rainfall is above 600 mm. Regarding soil properties, the analysis shows that organic matter from soils under minimum tillage or no-till is strongly related with runoff, the amount of sediments in runoff and soil loss. In soils from olive groves, the amount of sediments in runoff was significantly related to soil pH. Moreover, for olive-cropped soils under conventional tillage, soil loss is strongly related with clayey texture, which is characteristic of these soils. Concerning this, the relationship between soil loss and coarse sand contents is highly significant, and shows that medium-sized soil particles are most prone to detachment and transport by runoff. Thus, the average content of these fractions in soils under conventional management is more than two times that from olive groves under minimal or no tillage, which are more coarsely textured. In fine-textured soils, hydraulic conductivity is reduced, thus increasing soil erosion risk. In addition, in sandy and silty soils with low clay content, infiltration rates are high even when soil sealing is observed. At the scale of this experiment, runoff generation and soil erosion risk decrease significantly in areas under natural vegetation, with lower clay contents

Hydrocarbon status of soils in the asphalt deposit area (Samara Bend)

NASA Astrophysics Data System (ADS)

Pikovskiy, Yu. I.; Gennadiev, A. N.; Kovach, R. G.; Zhidkin, A. P.; Khlynina, N. I.; Kiseleva, A. Yu.

2017-04-01

The composition and distribution features of the main components of soil hydrocarbon complex― organic (noncarbonate) carbon, hexane bitumoids, and individual polycyclic aromatic hydrocarbons (PAHs)―in the area of depleted Bakhilovo asphalt deposit (Samara oblast) have been studied. According to their proportions, three genetic types of soil hydrocarbon status are distinguished: (a) emanation-injection type prevailing within the limits of the former production field and characterized by anomalous contents of heavy resinous bitumoids (5000-7000 mg/kg on the average) throughout the soil profile and a high content of PAHs (4-9 mg/kg on the average, 29 mg/kg as the maximum, with the dominance of naphthalene homologues); (b) emanation-biogeochemical type confined to mechanogenically undisturbed soils within and beyond the deposit area, where the emanation component is manifested in soils with heavy texture and higher concentrations and very light composition of bitumoids in the lower parts of the soil profile; and (c) atmosedimentation-biogeochemical type characteristic of conventionally background soils with light texture; benzo[ a]pyrene traces are detected among PAHs in the upper soil horizon, which indicates the input of this hydrocarbon with aerosols from the atmosphere; the concentrations of bitumoids and PAHs in parent rocks are lower than in the soils.

Assessing soil erosion using USLE model and MODIS data in the Guangdong, China

NASA Astrophysics Data System (ADS)

Gao, Feng; Wang, Yunpeng; Yang, Jingxue

2017-07-01

In this study, soil erosion in the Guangdong, China during 2012 was quantitatively assessed using Universal Soil Loss Equation (USLE). The parameters of the model were calculated using GIS and MODIS data. The spatial distribution of the average annual soil loss on grid basis was mapped. The estimated average annual soil erosion in Guangdong in 2012 is about 2294.47t/ (km2.a). Four high sensitive area of soil erosion in Guangdong in 2012 was found. The key factors of these four high sensitive areas of soil erosion were significantly contributed to the land cover types, rainfall and Economic development and human activities.

N2O emissions from humid tropical agricultural soils: effects of soil moisture, texture and nitrogen availability

Treesearch

A.M. Weitza; E. Linderb; S. Frolkingc; P.M. Crillc; M. Keller

2001-01-01

We studied soil moisture dynamics and nitrous oxide (N2O) ¯uxes from agricultural soils in the humid tropics of Costa Rica. Using a splitplot design on two soils (clay, loam) we compared two crop types (annual, perennial) each unfertilized and fertilized. Both soils are of andic origin. Their properties include relatively low bulk density and high organic matter...

Metagenomic analysis revealed highly diverse microbial arsenic metabolism genes in paddy soils with low-arsenic contents.

PubMed

Xiao, Ke-Qing; Li, Li-Guan; Ma, Li-Ping; Zhang, Si-Yu; Bao, Peng; Zhang, Tong; Zhu, Yong-Guan

2016-04-01

Microbe-mediated arsenic (As) metabolism plays a critical role in global As cycle, and As metabolism involves different types of genes encoding proteins facilitating its biotransformation and transportation processes. Here, we used metagenomic analysis based on high-throughput sequencing and constructed As metabolism protein databases to analyze As metabolism genes in five paddy soils with low-As contents. The results showed that highly diverse As metabolism genes were present in these paddy soils, with varied abundances and distribution for different types and subtypes of these genes. Arsenate reduction genes (ars) dominated in all soil samples, and significant correlation existed between the abundance of arr (arsenate respiration), aio (arsenite oxidation), and arsM (arsenite methylation) genes, indicating the co-existence and close-relation of different As resistance systems of microbes in wetland environments similar to these paddy soils after long-term evolution. Among all soil parameters, pH was an important factor controlling the distribution of As metabolism gene in five paddy soils (p = 0.018). To the best of our knowledge, this is the first study using high-throughput sequencing and metagenomics approach in characterizing As metabolism genes in the five paddy soil, showing their great potential in As biotransformation, and therefore in mitigating arsenic risk to humans. Copyright © 2015 Elsevier Ltd. All rights reserved.

Combined Resistivity and Shear Wave Velocity Soil-type Estimation Beneath a Coastal Protection Levee.

NASA Astrophysics Data System (ADS)

Lorenzo, J. M.; Goff, D.; Hayashi, K.

2015-12-01

Unconsolidated Holocene deltaic sediments comprise levee foundation soils in New Orleans, USA. Whereas geotechnical tests at point locations are indispensable for evaluating soil stability, the highly variable sedimentary facies of the Mississippi delta create difficulties to predict soil conditions between test locations. Combined electrical resistivity and seismic shear wave studies, calibrated to geotechnical data, may provide an efficient methodology to predict soil types between geotechnical sites at shallow depths (0- 10 m). The London Avenue Canal levee flank of New Orleans, which failed in the aftermath of Hurricane Katrina, 2005, presents a suitable site in which to pioneer these geophysical relationships. Preliminary cross-plots show electrically resistive, high-shear-wave velocity areas interpreted as low-permeability, resistive silt. In brackish coastal environments, low-resistivity and low-shear-wave-velocity areas may indicate both saturated, unconsolidated sands and low-rigidity clays. Via a polynomial approximation, soil sub-types of sand, silt and clay can be estimated by a cross-plot of S-wave velocity and resistivity. We confirm that existent boring log data fit reasonably well with the polynomial approximation where 2/3 of soil samples fall within their respective bounds—this approach represents a new classification system that could be used for other mid-latitude, fine-grained deltas.

[Survival capacity of Corynebacterium pseudotuberculosis biovar ovis in different soil types from Chubut, Argentine Patagonia].

PubMed

Alvarez, Laura; William, Aillin; Castro, Isabel; Valenzuela, Fernanda; Estevao Belchior, Silvia

Corynebacterium pseudotuberculosis is transmitted among sheep in Argentine Patagonia causing pseudotuberculosis. The bacterium penetrates the skin or mucous membrane wounds, infecting the superficial lymph nodes and viscera. When surface abscesses are cut during shearing, they drain their purulent contents and contaminate tools and the soil. The objective of this work was to evaluate the survival capacity of C. pseudotuberculosis over time, in soils from the extra-Andean Patagonia region. Five types of superficial soils were collected from different areas in Chubut province (extra-Andean Patagonia), having distinctive physicochemical properties including organic matter content (very high to nonexistent), pH (neutral to strongly alkaline), electrical conductivity (saline to non-saline) and texture (sandy, clayey, silty loam). Different aliquots of each type of soil were inoculated with C. pseudotuberculosis PAT10 strain isolated from a Patagonian sheep, and were stored at room temperature. The number of surviving bacteria was determined at various times. Sixty percent (60%) of the inoculated C. pseudotuberculosis population survived for 80 to 210 days in soils with moderate to high organic matter content respectively. Silty soils favored bacterial survival, whereas the variables pH and salinity had no effect on survival. Copyright © 2016 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

Prediction of soil organic carbon partition coefficients by soil column liquid chromatography.

PubMed

Guo, Rongbo; Liang, Xinmiao; Chen, Jiping; Wu, Wenzhong; Zhang, Qing; Martens, Dieter; Kettrup, Antonius

2004-04-30

To avoid the limitation of the widely used prediction methods of soil organic carbon partition coefficients (KOC) from hydrophobic parameters, e.g., the n-octanol/water partition coefficients (KOW) and the reversed phase high performance liquid chromatographic (RP-HPLC) retention factors, the soil column liquid chromatographic (SCLC) method was developed for KOC prediction. The real soils were used as the packing materials of RP-HPLC columns, and the correlations between the retention factors of organic compounds on soil columns (ksoil) and KOC measured by batch equilibrium method were studied. Good correlations were achieved between ksoil and KOC for three types of soils with different properties. All the square of the correlation coefficients (R2) of the linear regression between log ksoil and log KOC were higher than 0.89 with standard deviations of less than 0.21. In addition, the prediction of KOC from KOW and the RP-HPLC retention factors on cyanopropyl (CN) stationary phase (kCN) was comparatively evaluated for the three types of soils. The results show that the prediction of KOC from kCN and KOW is only applicable to some specific types of soils. The results obtained in the present study proved that the SCLC method is appropriate for the KOC prediction for different types of soils, however the applicability of using hydrophobic parameters to predict KOC largely depends on the properties of soil concerned.

Temporal variability in Cu speciation, phytotoxicity, and soil microbial activity of Cu-polluted soils as affected by elevated temperature.

PubMed

Fu, Qing-Long; Weng, Nanyan; Fujii, Manabu; Zhou, Dong-Mei

2018-03-01

Global warming has obtained increasing attentions due to its multiple impacts on agro-ecosystem. However, limited efforts had been devoted to reveal the temporal variability of metal speciation and phytotoxicity of heavy metal-polluted soils affected by elevated temperature under the global warming scenario. In this study, effects of elevated temperature (15 °C, 25 °C, and 35 °C) on the physicochemical properties, microbial metabolic activities, and phytotoxicity of three Cu-polluted soils were investigated by a laboratory incubation study. Soil physicochemical properties were observed to be significantly altered by elevated temperature with the degree of temperature effect varying in soil types and incubation time. The Biolog and enzymatic tests demonstrated that soil microbial activities were mainly controlled and decreased with increasing incubation temperature. Moreover, plant assays confirmed that the phytotoxicity and Cu uptake by wheat roots were highly dependent on soil types but less affected by incubation temperature. Overall, the findings in this study have highlighted the importance of soil types to better understand the temperature-dependent alternation of soil properties, Cu speciation and bioavailability, as well as phytotoxicity of Cu-polluted soils under global warming scenario. The present study also suggests the necessary of investigating effects of soil types on the transport and accumulation of toxic elements in soil-crop systems under global warming scenario. Copyright © 2017 Elsevier Ltd. All rights reserved.

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry.

PubMed

Tfaily, Malak M; Chu, Rosalie K; Tolić, Nikola; Roscioli, Kristyn M; Anderton, Christopher R; Paša-Tolić, Ljiljana; Robinson, Errol W; Hess, Nancy J

2015-01-01

Soil organic matter (SOM), a complex, heterogeneous mixture of above and belowground plant litter and animal and microbial residues at various degrees of decomposition, is a key reservoir for carbon (C) and nutrient biogeochemical cycling in soil based ecosystems. A limited understanding of the molecular composition of SOM limits the ability to routinely decipher chemical processes within soil and accurately predict how terrestrial carbon fluxes will respond to changing climatic conditions and land use. To elucidate the molecular-level structure of SOM, we selectively extracted a broad range of intact SOM compounds by a combination of different organic solvents from soils with a wide range of C content. Our use of electrospray ionization (ESI) coupled with Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and a suite of solvents with varying polarity significantly expands the inventory of the types of organic molecules present in soils. Specifically, we found that hexane is selective for lipid-like compounds with very low O/C ratios (<0.1); water (H2O) was selective for carbohydrates with high O/C ratios; acetonitrile (ACN) preferentially extracts lignin, condensed structures, and tannin polyphenolic compounds with O/C > 0.5; methanol (MeOH) has higher selectivity toward compounds characterized with low O/C < 0.5; and hexane, MeOH, ACN, and H2O solvents increase the number and types of organic molecules extracted from soil for a broader range of chemically diverse soil types. Our study of SOM molecules by ESI FTICR MS revealed new insight into the molecular-level complexity of organics contained in soils. We present the first comparative study of the molecular composition of SOM from different ecosystems using ultra high-resolution mass spectrometry.

Differential effects of lichens, mosses and grasses on respiration and nitrogen mineralization in soils of the New Jersey Pinelands.

PubMed

Sedia, Ekaterina G; Ehrenfeld, Joan G

2005-06-01

In the New Jersey Pinelands, severely disturbed areas often do not undergo a rapid succession to forest; rather, a patchy cover of lichens, mosses and grasses persists for decades. We hypothesized that these plant covers affect soil microbial processes in different ways, and that these effects may alter the successional dynamics of the patches. We predicted that the moss and grass covers stimulate soil microbial activity, whereas lichens inhibit it, which may in turn inhibit succession. We collected soil cores from beneath each type of cover plus bare soil within two types of highly disturbed areas--sites subjected to hot wildfires, and areas mined for sand. Organic matter (OM) content, soil respiration and potential N mineralization were measured in the cores. Soils under mosses were similar to those under grasses; they accumulated more OM and produced more mineral N, predominantly in the form of ammonium, than either the bare soils or the soils beneath lichens. Mineralization under lichens, like that of the bare soils but unlike the soils beneath mosses or grasses, was dominated by net nitrification. These patterns were reproduced in experimentally transplanted moss and lichen mats. Mosses appear to create high-nutrient microsites via high rates of OM accumulation and production of ammonium, whereas lichens maintain low-nutrient patches similar to bare soil via low OM accumulation rates and production of mineral N predominantly in the mobile nitrate form. These differences in soil properties may explain the lack of vascular plant invasion in lichen mats, in contrast to the moss-dominated areas.

Response of deep soil moisture to land use and afforestation in the semi-arid Loess Plateau, China

NASA Astrophysics Data System (ADS)

Yang, Lei; Wei, Wei; Chen, Liding; Mo, Baoru

2012-12-01

SummarySoil moisture is an effective water source for plant growth in the semi-arid Loess Plateau of China. Characterizing the response of deep soil moisture to land use and afforestation is important for the sustainability of vegetation restoration in this region. In this paper, the dynamics of soil moisture were quantified to evaluate the effect of land use on soil moisture at a depth of 2 m. Specifically, the gravimetric soil moisture content was measured in the soil layer between 0 and 8 m for five land use types in the Longtan catchment of the western Loess Plateau. The land use types included traditional farmland, native grassland, and lands converted from traditional farmland (pasture grassland, shrubland and forestland). Results indicate that the deep soil moisture content decreased more than 35% after land use conversion, and a soil moisture deficit appeared in all types of land with introduced vegetation. The introduced vegetation decreased the soil moisture content to levels lower than the reference value representing no human impact in the entire 0-8 m soil profile. No significant differences appeared between different land use types and introduced vegetation covers, especially in deeper soil layers, regardless of which plant species were introduced. High planting density was found to be the main reason for the severe deficit of soil moisture. Landscape management activities such as tillage activities, micro-topography reconstruction, and fallowed farmland affected soil moisture in both shallow and deep soil layers. Tillage and micro-topography reconstruction can be used as effective countermeasures to reduce the soil moisture deficit due to their ability to increase soil moisture content. For sustainable vegetation restoration in a vulnerable semi-arid region, the plant density should be optimized with local soil moisture conditions and appropriate landscape management practices.

Integrated Universal Soil Loss Equation (USLE) and Geographical Information System (GIS) for Soil Erosion Measurement in basin of Asap river, Central Vietnam

NASA Astrophysics Data System (ADS)

Pham Gia, Tung; Degener, Jan; Kappas, Martin

2017-04-01

The study was conducted in Asap river basin, A Luoi district, Thua Thien Hue Province, Vietnam, using the Universal Soil Loss Equation (USLE) and Geographical Information System (GIS) to determine the soil erosion status. The results show strong effect of the heavy rainfall and high slope on the erosion level in the research area. More than 40% of land area lost over 10 tons/ha/year. The natural forest land lost the most by averagely is 38.4 tons/ha/year, while the agricultural land showed less with 2.79 tons for paddy rice land use type and 7.58 tons for upland crops yearly. Comparison between some places of Vietnam and the Southeast Asia showed that soil erosion in watersheds of Asap is more serious. We have been proposed a recommendation on changing the classification system of land use type in Vietnam for more accurate in soil erosion measurement. Keywords: Land use type, Soil erosion, USLE, Central Vietnam.

Nitrous oxide emission reduction in temperate biochar-amended soils

NASA Astrophysics Data System (ADS)

Felber, R.; Hüppi, R.; Leifeld, J.; Neftel, A.

2012-01-01

Biochar, a pyrolysis product of organic residues, is an amendment for agricultural soils to improve soil fertility, sequester CO2 and reduce greenhouse gas (GHG) emissions. In highly weathered tropical soils laboratory incubations of soil-biochar mixtures revealed substantial reductions for nitrous oxide (N2O) and carbon dioxide (CO2). In contrast, evidence is scarce for temperate soils. In a three-factorial laboratory incubation experiment two different temperate agricultural soils were amended with green waste and coffee grounds biochar. N2O and CO2 emissions were measured at the beginning and end of a three month incubation. The experiments were conducted under three different conditions (no additional nutrients, glucose addition, and nitrate and glucose addition) representing different field conditions. We found mean N2O emission reductions of 60 % compared to soils without addition of biochar. The reduction depended on biochar type and soil type as well as on the age of the samples. CO2 emissions were slightly reduced, too. NO3- but not NH4+ concentrations were significantly reduced shortly after biochar incorporation. Despite the highly significant suppression of N2O emissions biochar effects should not be transferred one-to-one to field conditions but need to be tested accordingly.

Enhancement of acid phosphatase secretion and Pi acquisition in Suaeda fruticosa on calcareous soil by high saline level.

PubMed

Labidi, Nehla; Snoussi, Sana; Ammari, Manel; Metoui, Wissal; Ben Yousfi, N; Hamrouni, Lamia; Abdelly, C

2010-12-01

The aim of this study was to identify the relationship between the adaptive processes of Suaeda fruticosa for Pi acquisition and the physic-chemical and biological characteristics of two soil types under moderate and high saline conditions. Four treatments were established in pots: namely SS100, SS600, CS100 and CS600 where SS stood for sandy soil and CS for calcareous soil, and the indexes 100 and 600 were NaCl concentrations (mM) in irrigation distilled water. Assuming that Pi per g of plant biomass is an indicator of plant efficiency for P acquisition, the results showed that Pi acquisition was easiest on SS100 and was difficult on CS100. The differences in Pi acquisition between plants on SS100 and CS100 could be attributed to the low root surface area (-30%) and to the low alkaline phosphatases (Pases) activities (-50%) in calcareous rhizospheric soil. The high salinity level had no effect on the efficiency of P acquisition on SS but increased this parameter on CS (+50%). In the latter soil type, high acid phosphatase activities were observed in rhizospheric soil at high salinity level. Acid phosphatase seemed to be secreted from the roots. The higher secretion of acid phosphatase in this soil was related to the root lipid peroxidation in response to elevated salinity associated with the augmentation of unsaturated acids which might induce an oxidative damage of the root membrane. Thus we can conclude that in deficient soil such as calcareous, the efficiency of P acquisition in S. fruticosa which was difficult at moderate salinity level can be enhanced by high salinity level.

Organic layer serves as a hotspot of microbial activity and abundance in Arctic tundra soils.

PubMed

Lee, Seung-Hoon; Jang, Inyoung; Chae, Namyi; Choi, Taejin; Kang, Hojeong

2013-02-01

Tundra ecosystem is of importance for its high accumulation of organic carbon and vulnerability to future climate change. Microorganisms play a key role in carbon dynamics of the tundra ecosystem by mineralizing organic carbon. We assessed both ecosystem process rates and community structure of Bacteria, Archaea, and Fungi in different soil layers (surface organic layer and subsurface mineral soil) in an Arctic soil ecosystem located at Spitsbergen, Svalbard during the summer of 2008 by using biochemical and molecular analyses, such as enzymatic assay, terminal restriction fragment length polymorphism (T-RFLP), quantitative polymerase chain reaction (qPCR), and pyrosequencing. Activity of hydrolytic enzymes showed difference according to soil type. For all three microbial communities, the average gene copy number did not significantly differ between soil types. However, archaeal diversities appeared to differ according to soil type, whereas bacterial and fungal diversity indices did not show any variation. Correlation analysis between biogeochemical and microbial parameters exhibited a discriminating pattern according to microbial or soil types. Analysis of the microbial community structure showed that bacterial and archaeal communities have different profiles with unique phylotypes in terms of soil types. Water content and hydrolytic enzymes were found to be related with the structure of bacterial and archaeal communities, whereas soil organic matter (SOM) and total organic carbon (TOC) were related with bacterial communities. The overall results of this study indicate that microbial enzyme activity were generally higher in the organic layer than in mineral soils and that bacterial and archaeal communities differed between the organic layer and mineral soils in the Arctic region. Compared to mineral soil, peat-covered organic layer may represent a hotspot for secondary productivity and nutrient cycling in this ecosystem.

[Hydrological characteristics of calcareous soil with contrasting architecture on dolomite slope of Northwest Guangxi].

PubMed

Zhang, Xing; Wang, Ke Lin; Fu, Zhi Yong; Chen, Hong Song; Zhang, Wei; Shi, Zhi Hua

2017-07-18

The traditional hydrology method, stable hydrogen and oxygen isotope technology, and rainfall simulation method were combined to investigate the hydrological function of small experimental plots (2 m×1.2 m) of contrasting architecture in Northwest Guangxi dolomite area. There were four typical catenary soils along the dolomite peak-cluster slope, which were the whole-sand, up-loam and down-sand, the whole loam, up-clay and down-sand soil types, respectively. All the experimental plots generated little amounts of overland runoff and had a high surface infiltration rate, ranging from 41 to 48 mm·h -1 , and the interflow and deep percolation were the dominant hydrological progress. The interflow was classified into interflow in soil clay A and C according to soil genetic layers. For interflow in soil clay A, matrix flow was generated from the whole-sand, up-loam and down-sand, up-clay and down-sand soil types, but preferential flow dominated in the whole-loam soil type. As for interflow in soil clay C, preferential flow dominated in the whole-loam, up-clay and down-sand, up-loam and down-sand soil types. The soils were shallow yet continuously distributed along the dolomite slope. The difference of hydrological characteristics in soil types with different architectures mainly existed in the runoff generation progress of each interface underground. It proved that the a 3-D perspective was needed to study the soil hydrological functions on dolomite slope of Northwest Guangxi, and a new way paying more attention on underground hydrological progress should be explored to fully reveal the near-surface hydrological processes on karst slope.

Detailed Hydraulic Assessment Using a High-Resolution Piezocone Coupled to the GeoVIS

DTIC Science & Technology

2008-07-01

statistical means can be performed. • Repeat K comparisons at a highly permeable site. The piezocone is capable of estimating K in soils of higher...Version 1, March 2006, 131 pp. Ferritto, J.M., 1997. Seismic Design Criteria for Soil Liquefaction , NFESC Technical Report TR-2077-SHR, June, 1997... Soil Type and Well Design Logs................................................................... 20 Figure 6. Interpolated Three-Dimensional Head

Development and survival of Anopheles gambiae eggs in drying soil: influence of the rate of drying, egg age, and soil type.

PubMed

Shililu, J I; Grueber, W B; Mbogo, C M; Githure, J I; Riddiford, L M; Beier, J C

2004-09-01

Little is known about the contribution made by the egg stage of African malaria vectors to the rapid rise in adult populations following the onset of seasonal rains. To examine this issue, we evaluated the viability of Anopheles gambiae eggs in drying soil in the laboratory. Survival data were collected from field-caught mosquitoes kept in sandy loam soil and laboratory-reared colonies kept in sandy loam soil and black cotton soil. Under high, medium, and low soil-moisture regimes, egg viability declined sharply with increased duration of drying. Eggs remained viable in drying sandy loam soil for 1, 5, and 10 days, but not after 15 or 20 days. The most dramatic decline in hatching success occurred between drying days 1 (78-83% hatch) and 5 (20-23% hatch). In contrast, eggs reared in high-moisture black cotton soil remained viable for up to 15 days. Furthermore, after 5 drying days, high-, medium-, and low-moisture soils averaged 59, 47, and 31% hatching success, respectively. We recovered unhatched eggs from sandy loam soils to examine the developmental status of the embryos. A majority of the unhatched eggs that were recovered from days 15 and 20 in sandy loam soils contained fully developed late-stage embryos. Thus, unhatched eggs completed embryonic development but probably died before receiving an appropriate hatching stimulus. Our results suggest that the absolute moisture content of the soil does not alone determine hatching success of anopheline eggs. Rather, soil moisture, together with the rate of drying, physiological factors associated with the age of the egg, and the type of soil in which the egg rests likely influence survival.

In situ burning of oil in coastal marshes. 1. Vegetation recovery and soil temperature as a function of water depth, oil type, and marsh type.

PubMed

Lin, Qianxin; Mendelssohn, Irving A; Bryner, Nelson P; Walton, William D

2005-03-15

In-situ burning of oiled wetlands potentially provides a cleanup technique that is generally consistent with present wetland management procedures. The effects of water depth (+10, +2, and -2 cm), oil type (crude and diesel), and oil penetration of sediment before the burn on the relationship between vegetation recovery and soil temperature for three coastal marsh types were investigated. The water depth over the soil surface during in-situ burning was a key factor controlling marsh plant recovery. Both the 10- and 2-cm water depths were sufficient to protect marsh vegetation from burning impacts, with surface soil temperatures of <35 and 48 degrees C, respectively. Plant survival rate and growth responses at these water depth burns were not significantly different from the unburned control. In contrast, a water table 2 cm below the soil surface during the burn resulted in high soil temperatures, with 90-200 degrees C at 0-0.5 cm soil depth and 55-75 degrees C at 1-2 cm soil depth. The 2-cm soil exposure to fire significantly impeded the post-burn recovery of Spartina alterniflora and Sagittaria lancifolia but did not detrimentally affect the recovery of Spartina patens and Distichlis spicata. Oil type (crude vs diesel) and oil applied to the marsh soil surface (0.5 L x m(-2)) before the burn did not significantly affect plant recovery. Thus, recovery is species-specific when no surface water exists. Even water at the soil surface will most likely protect wetland plants from burning impact.

Dynamic arsenic aging processes and their mechanisms in nine types of Chinese soils.

PubMed

Wang, Yanan; Zeng, Xibai; Lu, Yahai; Bai, Lingyu; Su, Shiming; Wu, Cuixia

2017-11-01

Although specific soil properties controlling the arsenic (As) aging process have been studied extensively, few investigations have attempted to determine how soil types influence As bioavailability and fractionations in soils. Nine types of soil were selected from typical grain producing areas in China, and the bioavailability and fractionations of As during aging were measured. Results showed that available As in all soils rapidly decreased in the first 30 days and slowly declined thereafter. In spiked soils, As easily became less available and less toxic in low pH soils compared to high pH soils, demonstrating the importance of soil pH on As availability. Results from fitting kinetic equations revealed that the pseudo-second-order model described the As aging processes well in all soils (R 2  = 0.945-0.999, P < 0.01, SE = 0.09-4.25), implying that the mechanism for As aging combined adsorption, external diffusion, and internal diffusion. Fe oxides were more important than Al oxides for determining the As aging rate (|k|). Based on these results, we are the first to propose the approximate aging equilibrium time (T) for As, which was mainly influenced by soil clay content. The shortest time for approximate stabilization of As aging was 28 d in latosol soils (LS), while the longest approximate equilibrium time was 169 d in cinnamon soils (CS). Individual soil properties controlling the variation in different As fractionations further confirmed that the influences of soil types on As aging were the result of the combined effects of soil properties and a time-consuming redistribution process. Copyright © 2017 Elsevier Ltd. All rights reserved.

Spatial pattern and heterogeneity of soil moisture along a transect in a small catchment on the Loess Plateau

NASA Astrophysics Data System (ADS)

Yang, Yang; Dou, Yanxing; Liu, Dong; An, Shaoshan

2017-07-01

Spatial pattern and heterogeneity of soil moisture is important for the hydrological process on the Loess Plateau. This study combined the classical and geospatial statistical techniques to examine the spatial pattern and heterogeneity of soil moisture along a transect scale (e.g. land use types and topographical attributes) on the Loess Plateau. The average values of soil moisture were on the order of farmland > orchard > grassland > abandoned land > shrubland > forestland. Vertical distribution characteristics of soil moisture (0-500 cm) were similar among land use types. Highly significant (p < 0.01) negative correlations were found between soil moisture and elevation (h) except for shrubland (p > 0.05), whereas no significant correlations were found between soil moisture and plan curvature (Kh), stream power index (SPI), compound topographic index (CTI) (p > 0.05), indicating that topographical attributes (mainly h) have a negative effect on the soil moisture spatial heterogeneity. Besides, soil moisture spatial heterogeneity decreased from forestland to grassland and farmland, accompanied by a decline from 15° to 1° alongside upper to lower slope position. This study highlights the importance of land use types and topographical attributes on the soil moisture spatial heterogeneity from a combined analysis of the structural equation model (SEM) and generalized additive models (GAMs), and the relative contribution of land use types to the soil moisture spatial heterogeneity was higher than that of topographical attributes, which provides insights for researches focusing on soil moisture varitions on the Loess Plateau.

Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India

PubMed Central

2012-01-01

Background Soils harbour high diversity of obligate as well as facultative chemolithoautotrophic bacteria that contribute significantly to CO2 dynamics in soil. In this study, we used culture dependent and independent methods to assess the community structure and diversity of chemolithoautotrophs in agricultural and coastal barren saline soils (low and high salinity). We studied the composition and distribution of chemolithoautotrophs by means of functional marker gene cbbL encoding large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase and a phylogenetic marker 16S rRNA gene. The cbbL form IA and IC genes associated with carbon fixation were analyzed to gain insight into metabolic potential of chemolithoautotrophs in three soil types of coastal ecosystems which had a very different salt load and sulphur content. Results In cbbL libraries, the cbbL form IA was retrieved only from high saline soil whereas form IC was found in all three soil types. The form IC cbbL was also amplified from bacterial isolates obtained from all soil types. A number of novel monophyletic lineages affiliated with form IA and IC phylogenetic trees were found. These were distantly related to the known cbbL sequences from agroecosystem, volcanic ashes and marine environments. In 16S rRNA clone libraries, the agricultural soil was dominated by chemolithoautotrophs (Betaproteobacteria) whereas photoautotrophic Chloroflexi and sulphide oxidizers dominated saline ecosystems. Environmental specificity was apparently visible at both higher taxonomic levels (phylum) and lower taxonomic levels (genus and species). The differentiation in community structure and diversity in three soil ecosystems was supported by LIBSHUFF (P = 0.001) and UniFrac. Conclusion This study may provide fundamentally new insights into the role of chemolithoautotrophic and photoautotrophic bacterial diversity in biochemical carbon cycling in barren saline soils. The bacterial communities varied greatly among the three sites, probably because of differences in salinity, carbon and sulphur contents. The cbbL form IA-containing sulphide-oxidizing chemolithotrophs were found only in high saline soil clone library, thus giving the indication of sulphide availability in this soil ecosystem. This is the first comparative study of the community structure and diversity of chemolithoautotrophic bacteria in coastal agricultural and saline barren soils using functional (cbbL) and phylogenetic (16S rDNA) marker genes. PMID:22834535

imVisIR - a new tool for high resolution soil characterisation

NASA Astrophysics Data System (ADS)

Steffens, Markus; Buddenbaum, Henning

2014-05-01

The physical and chemical heterogeneities of soils are the source of a vast functional diversity of soil properties in a multitude of spatial domains. But many studies do not consider the spatial variability of soil types, diagnostic horizons and properties. These lateral and vertical heterogeneities of soils or soil horizons are mostly neglected due to the limitations in the available soil data and missing techniques to gather the information. We present an imaging technique that enables the spatially accurate, high resolution assessment (63×63 µm2 per pixel) of complete soil profiles consisting of mineral and organic horizons. We used a stainless steel box (100×100×300 mm3) to sample various soil types and a hyperspectral camera to record the bidirectional reflectance of the large undisturbed soil samples in the visible and near infrared (Vis-NIR) part of the electromagnetic spectrum (400-1000 nm in 160 spectral bands). Various statistical, geostatistical and image processing tools were used to 1) assess the spatial variability of the soil profile as a whole; 2) classify diagnostic horizons; 3) extrapolate elemental concentrations of small sampling areas to the complete image and calculate high resolution chemometric maps of up to five elements (C, N, Al, Fe, Mn); and 4) derive maps of the chemical composition of soil organic matter. Imaging Vis-NIR (imVisIR) has the potential to significantly improve soil classification, assessment of elemental budgets and balances and the understanding of soil forming processes and mechanisms. It will help to identify areas of interest for techniques working on smaller scales and enable the upscaling and referencing of this information to the complete pedon.

Dissolved organic carbon fluxes from soils in the Alaskan coastal temperate rainforest

NASA Astrophysics Data System (ADS)

D'Amore, D. V.; Edwards, R.; Hood, E. W.; Herendeen, P. A.; Valentine, D.

2011-12-01

Soil saturation and temperature are the primary factors that influence soil carbon cycling. Interactions between these factors vary by soil type, climate, and landscape position, causing uncertainty in predicting soil carbon flux from. The soils of the North American perhumid coastal temperate rainforest (NCTR) store massive amounts of carbon, yet there is no estimate of dissolved organic carbon (DOC) export from different soil types in the region. There are also no working models that describe the influence of soil saturation and temperature on the export of DOC from soils. To address this key information gap, we measured soil water table elevation, soil temperature, and soil and stream DOC concentrations to calculate DOC flux across a soil hydrologic gradient that included upland soils, forested wetland soils, and sloping bog soils in the NCTR of southeast Alaska. We found that increased soil temperature and frequent fluctuations of soil water tables promoted the export of large quantities of DOC from wetland soils and relatively high amounts of DOC from mineral soils. Average area-weighted DOC flux ranged from 7.7 to 33.0 g C m-2 y-1 across a gradient of hydropedologic soil types. The total area specific export of carbon as DOC for upland, forested wetland and sloping bog catchments was 77, 306, and 329 Kg C ha-1 y-1 respectively. The annual rate of carbon export from wetland soils in this region is among the highest reported in the literature. These findings highlight the importance of terrestrial-aquatic fluxes of DOC as a pathway for carbon loss in the NCTR.

Improvement of cadmium phytoremediation by Centella asiatica L. after soil inoculation with cadmium-resistant Enterobacter sp. FM-1.

PubMed

Li, Yi; Liu, Kehui; Wang, Yang; Zhou, Zhenming; Chen, Chaoshu; Ye, Panhua; Yu, Fangming

2018-07-01

This study examined the potential of a cadmium-resistant Enterobacter sp. FM-1 to promote plant growth and assist in cadmium accumulation in both mine-type C. asiatica L. and non-mine type C. asiatica L. tissues in highly cadmium-polluted soils. The results indicated that Enterobacter sp. FM-1 significantly promoted growth and alleviated metal toxicity in both types of C. asiatica L. Meanwhile, inoculation with Enterobacter sp. FM-1 in contaminated soil can increased cadmium bioavailability in soil. Furthermore, it will increase plant uptake and the accumulation of cadmium in C. asiatica L. leaves, stems and roots compared to that in an uninoculated plant. However, mine-type C. asiatica L. had better cadmium tolerance than the non mine-type C. asiatica L. Because of its native metal-tolerant ability, which could easily grow and proliferate, and had a better performance under cadmium-contamination conditions. Additionally, inoculation with Enterobacter sp. FM-1 significantly enhanced the bioaccumulation factor (BAF) and the translocation factor (TF) values in both types of C. asiatica L. even under high cadmium concentration soil condition. Hence, based on higher BAF and TF values and strong cadmium accumulation in the leaves and stems, we concluded that inoculation with Enterobacter sp. FM-1 is potentially useful for the phytoremediation of cadmium-contaminated sites by Centella asiatica L. Copyright © 2018 Elsevier Ltd. All rights reserved.

Intercomparison of Lab-Based Soil Water Extraction Methods for Stable Water Isotope Analysis

NASA Astrophysics Data System (ADS)

Pratt, D.; Orlowski, N.; McDonnell, J.

2016-12-01

The effect of pore water extraction technique on resultant isotopic signature is poorly understood. Here we present results of an intercomparison of five common lab-based soil water extraction techniques: high pressure mechanical squeezing, centrifugation, direct vapor equilibration, microwave extraction, and cryogenic extraction. We applied five extraction methods to two physicochemically different standard soil types (silty sand and clayey loam) that were oven-dried and rewetted with water of known isotopic composition at three different gravimetric water contents (8, 20, and 30%). We tested the null hypothisis that all extraction techniques would provide the same isotopic result independent from soil type and water content. Our results showed that the extraction technique had a significant effect on the soil water isotopic composition. Each method exhibited deviations from spiked reference water, with soil type and water content showing a secondary effect. Cryogenic extraction showed the largest deviations from the reference water, whereas mechanical squeezing and centrifugation provided the closest match to the reference water for both soil types. We also compared results for each extraction technique that produced liquid water on both an OA-ICOS and IRMS; differences between them were negligible.

Molecular diversity of arbuscular mycorrhizal fungi in relation to soil chemical properties and heavy metal contamination.

PubMed

Zarei, Mehdi; Hempel, Stefan; Wubet, Tesfaye; Schäfer, Tina; Savaghebi, Gholamreza; Jouzani, Gholamreza Salehi; Nekouei, Mojtaba Khayam; Buscot, François

2010-08-01

Abundance and diversity of arbuscular mycorrhizal fungi (AMF) associated with dominant plant species were studied along a transect from highly lead (Pb) and zinc (Zn) polluted to non-polluted soil at the Anguran open pit mine in Iran. Using an established primer set for AMF in the internal transcribed spacer (ITS) region of rDNA, nine different AMF sequence types were distinguished after phylogenetic analyses, showing remarkable differences in their distribution patterns along the transect. With decreasing Pb and Zn concentration, the number of AMF sequence types increased, however one sequence type was only found in the highly contaminated area. Multivariate statistical analysis revealed that further factors than HM soil concentration affect the AMF community at contaminated sites. Specifically, the soils' calcium carbonate equivalent and available P proved to be of importance, which illustrates that field studies on AMF distribution should also consider important environmental factors and their possible interactions. Copyright 2010 Elsevier Ltd. All rights reserved.

Conservation strategies on citrus plantation in eastern Spain. Catch crops, geotextiles and mulches

NASA Astrophysics Data System (ADS)

Cerdà, Artemi; Dominguez, Alfons; Giménez Morera, Antonio

2010-05-01

Tillage (6 %), and herbicides (89 %) are the most widespread soil management methods in eastern Spain citrus orchards. The bare soils, the high intensity thunderstorms and the steep slopes result in high erosion rates. Over the last 3 years an experimental station has been developed at Montesa municipality in order to determine the effect of different types of mulch, geotextiles and catch crops. Rainfall simulation experiments on 20 m2 plots shown that soil losses can be control by catch crops (85 %), chipped pruned branches (89 %), straw mulch (97 %) and geotextiles (99 %). Then, vegetation can contribute to control the soil and water losses on the highly erodible soil of Mediterranean orchards.

Research on the Effects of Drying Temperature on Nitrogen Detection of Different Soil Types by Near Infrared Sensors.

PubMed

Nie, Pengcheng; Dong, Tao; He, Yong; Xiao, Shupei

2018-01-29

Soil is a complicated system whose components and mechanisms are complex and difficult to be fully excavated and comprehended. Nitrogen is the key parameter supporting plant growth and development, and is the material basis of plant growth as well. An accurate grasp of soil nitrogen information is the premise of scientific fertilization in precision agriculture, where near infrared sensors are widely used for rapid detection of nutrients in soil. However, soil texture, soil moisture content and drying temperature all affect soil nitrogen detection using near infrared sensors. In order to investigate the effects of drying temperature on the nitrogen detection in black soil, loess and calcium soil, three kinds of soils were detected by near infrared sensors after 25 °C placement (ambient temperature), 50 °C drying (medium temperature), 80 °C drying (medium-high temperature) and 95 °C drying (high temperature). The successive projections algorithm based on multiple linear regression (SPA-MLR), partial least squares (PLS) and competitive adaptive reweighted squares (CARS) were used to model and analyze the spectral information of different soil types. The predictive abilities were assessed using the prediction correlation coefficients (R P ), the root mean squared error of prediction (RMSEP), and the residual predictive deviation (RPD). The results showed that the loess (R P = 0.9721, RMSEP = 0.067 g/kg, RPD = 4.34) and calcium soil (R P = 0.9588, RMSEP = 0.094 g/kg, RPD = 3.89) obtained the best prediction accuracy after 95 °C drying. The detection results of black soil (R P = 0.9486, RMSEP = 0.22 g/kg, RPD = 2.82) after 80 °C drying were the optimum. In conclusion, drying temperature does have an obvious influence on the detection of soil nitrogen by near infrared sensors, and the suitable drying temperature for different soil types was of great significance in enhancing the detection accuracy.

Observation and difference analysis of carbon fluxes in different types of soil in Tianjin coastal zone

NASA Astrophysics Data System (ADS)

Li, Ya-Juan; Wang, Ting-Feng; Mao, Tian-Yu

2018-02-01

Tianjin Coastal Zone is located in the coastal area of the Bohai Sea, belonging to the typical coastal wetland, with high carbon value. Over the past decade the development of great intensity, there are obvious characteristics of artificial influence. This study focuses on observing the carbon fluxes of different soil types in the coastal area under strong artificial disturbance, summarizing the carbon sink calculation formula according to the soil type, and analyzing the main influencing factors affecting the carbon flux. The results show that there are representative intertidal zones in Tianjin, and the respiration of soil and secondary soil are different. The main influencing factors are soil surface temperature or air temperature. Coastal zones with different ecosystems can basically establish the relationship between temperature and soil carbon flux. (R2 = 0.5990), the relationship between artificial backfill is Q = 0.2061 - 0.2129T - 0.0391T2 (R2 = 0.7469), and the artificial soil is restored by artificial soil and the herbaceous greening is carried out., The relationship is Q = -0.1019 + 0.0327T‧ (R2 = 0.6621), T-soil temperature, T’-air temperature. At the same temperature, soil carbon fluxes in shoal wetlands are generally stronger than artificial backfill, showing more carbon source emissions.

Long term soil pH change in rainfed cropping systems: is acidification systemic?

USDA-ARS?s Scientific Manuscript database

Many soils throughout the northern Great Plains developed from deep, moderately-weathered glacial and loess deposits under prairie vegetation. Soils of this type are typically neutral to slightly acidic in near-surface depths, and slightly to strongly alkaline in subsoil depths, with high buffer cap...

Site-level model intercomparison of high latitude and high altitude soil thermal dynamics in tundra and barren landscapes

NASA Astrophysics Data System (ADS)

Ekici, A.; Chadburn, S.; Chaudhary, N.; Hajdu, L. H.; Marmy, A.; Peng, S.; Boike, J.; Burke, E.; Friend, A. D.; Hauck, C.; Krinner, G.; Langer, M.; Miller, P. A.; Beer, C.

2015-07-01

Modeling soil thermal dynamics at high latitudes and altitudes requires representations of physical processes such as snow insulation, soil freezing and thawing and subsurface conditions like soil water/ice content and soil texture. We have compared six different land models: JSBACH, ORCHIDEE, JULES, COUP, HYBRID8 and LPJ-GUESS, at four different sites with distinct cold region landscape types, to identify the importance of physical processes in capturing observed temperature dynamics in soils. The sites include alpine, high Arctic, wet polygonal tundra and non-permafrost Arctic, thus showing how a range of models can represent distinct soil temperature regimes. For all sites, snow insulation is of major importance for estimating topsoil conditions. However, soil physics is essential for the subsoil temperature dynamics and thus the active layer thicknesses. This analysis shows that land models need more realistic surface processes, such as detailed snow dynamics and moss cover with changing thickness and wetness, along with better representations of subsoil thermal dynamics.

Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach

DOE PAGES

Le Roux, Xavier; Bouskill, Nicholas J.; Niboyet, Audrey; ...

2016-05-17

Soil microbial diversity is huge and a few grams of soil contain more bacterial taxa than there are bird species on Earth. This high diversity often makes predicting the responses of soil bacteria to environmental change intractable and restricts our capacity to predict the responses of soil functions to global change. Here, using a long-term field experiment in a California grassland, we studied the main and interactive effects of three global change factors (increased atmospheric CO 2 concentration, precipitation and nitrogen addition, and all their factorial combinations, based on global change scenarios for central California) on the potential activity, abundancemore » and dominant taxa of soil nitrite-oxidizing bacteria (NOB). Using a trait-based model, we then tested whether categorizing NOB into a few functional groups unified by physiological traits enables understanding and predicting how soil NOB respond to global environmental change. Contrasted responses to global change treatments were observed between three main NOB functional types. In particular, putatively mixotrophic Nitrobacter, rare under most treatments, became dominant under the 'High CO 2 +Nitrogen+Precipitation' treatment. The mechanistic trait-based model, which simulated ecological niches of NOB types consistent with previous ecophysiological reports, helped predicting the observed effects of global change on NOB and elucidating the underlying biotic and abiotic controls. Our results are a starting point for representing the overwhelming diversity of soil bacteria by a few functional types that can be incorporated into models of terrestrial ecosystems and biogeochemical processes.« less

Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Le Roux, Xavier; Bouskill, Nicholas J.; Niboyet, Audrey

Soil microbial diversity is huge and a few grams of soil contain more bacterial taxa than there are bird species on Earth. This high diversity often makes predicting the responses of soil bacteria to environmental change intractable and restricts our capacity to predict the responses of soil functions to global change. Here, using a long-term field experiment in a California grassland, we studied the main and interactive effects of three global change factors (increased atmospheric CO 2 concentration, precipitation and nitrogen addition, and all their factorial combinations, based on global change scenarios for central California) on the potential activity, abundancemore » and dominant taxa of soil nitrite-oxidizing bacteria (NOB). Using a trait-based model, we then tested whether categorizing NOB into a few functional groups unified by physiological traits enables understanding and predicting how soil NOB respond to global environmental change. Contrasted responses to global change treatments were observed between three main NOB functional types. In particular, putatively mixotrophic Nitrobacter, rare under most treatments, became dominant under the 'High CO 2 +Nitrogen+Precipitation' treatment. The mechanistic trait-based model, which simulated ecological niches of NOB types consistent with previous ecophysiological reports, helped predicting the observed effects of global change on NOB and elucidating the underlying biotic and abiotic controls. Our results are a starting point for representing the overwhelming diversity of soil bacteria by a few functional types that can be incorporated into models of terrestrial ecosystems and biogeochemical processes.« less

High-resolution stable isotope monitoring reveals differential vegetation-soil water feedbacks among plant functional types

NASA Astrophysics Data System (ADS)

Volkmann, T. H. M.; Haberer, K.; Troch, P. A. A.; Gessler, A.; Weiler, M.

2016-12-01

Understanding the linked dynamics of rain water recharge to soils and its utilization by plants is critical for predicting the impact of climate and land use changes on the productivity of ecosystems and the hydrologic cycle. While plants require vast quantities of water from the soil to sustain growth and function, they exert important direct and indirect controls on the movement of water through the rooted soil horizons, thereby potentially affecting their own resource availability. However, the specific ecohydrological belowground processes associated with different plant types and their rooting systems have been difficult to quantify with traditional methods. Here, we report on the use of techniques for monitoring stable isotopes in soil and plant water pools that allow us to track water infiltration and root uptake dynamics non-destructively and in high resolution. The techniques were applied in controlled rain pulse experiments with distinct plant types (grass, deciduous trees, grapevine) that we let develop on an initially uniform soil for two years. Our results show that plant species and types differed widely in their plasticity and pattern of root uptake under variable water availability. Thereby, and through notably co-acting indirect effects related to differential root system traits and co-evolution of soil properties, the different plants induced contrasting hydrological dynamics in the soil they had inhabited for only a short period of time. Taken together, our data suggest that the studied soil-vegetation systems evolved a positive infiltration-uptake feedback in which hydrological flow pathways underlying different species diverged in a way that complemented their specific water utilization strategy. Such a feedback could present an indirect competitive mechanism by which plants improve their own water supply and modulate hydrological cycling at the land surface. The ability to directly measure this feedback using in situ isotope methodology highlights the great potential for stable isotope research to improve our understanding of the soil-vegetation-atmosphere system.

Abiotic factors affect the recruitment and biomass of perennial grass and evergreen shrub seedlings in denuded areas of Patagonian Monte rangelands.

PubMed

Bosco, Tomás; Bertiller, Mónica Beatriz; Carrera, Analía Lorena

2018-07-15

Assessing the ability of key species to cope with environmental stresses in disturbed areas is an important issue for recovery of degraded arid ecosystem. Our objective was to evaluate the effect of soil moisture, exposure to UV radiation, and presence/absence of litter with different chemistry on soil N, recruitment and biomass of seedlings of perennial grass (Poa ligularis and Nassella tenuis) and evergreen shrub species (Atriplex lampa and Larrea divaricata) in denuded areas. We carried out a microcosm experiment with soil blocks (28 cm depth) sowed with seeds of the target species, subjected to different levels of litter type (perennial grass-evergreen shrub mixture, evergreen shrub mixture, and no litter), UV radiation (near ambient and reduced UV), and soil water (high: 15-25% and low 5-15%). Periodically, during 6 months, we assessed soil-N (total and inorganic) at two depths and species seedling recruitment at microcosms. Additionally, emerged seedlings of each species were transplanted to individual pots containing soil and subjected to the same previous factors during 12 months. Then, all plants were harvested and biomass assessed. Only inorganic soil-N at the upper soil varied among treatments increasing with the presence of evergreen shrub litter, exposure to ambient UV, and high soil water. Inorganic soil-N, promoted by near ambient UV and high soil water, had a positive effect on recruitment of perennial grasses and A. lampa. Both litter types promoted the recruitment of perennial grasses. Evergreen shrub litter and high soil water promoted the recruitment of L. divaricata. Seedling biomass of perennial grasses increased with high soil water and reduced UV. Ambient UV had positive or null effects on biomass of evergreen shrub seedlings. High soil water increased biomass of L. divaricata seedlings. We concluded that soil water appeared as the most limiting factor for seedling recruitment of all species whereas inorganic soil N limited the recruitment of the small-seeded perennial grasses and A. lampa. Ambient UV had negative effects on seedling biomass of perennial grasses. These complex relationships among abiotic factors and seed and plant traits should be taken into account when planning management actions after disturbances. Copyright © 2018 Elsevier Ltd. All rights reserved.

‘Natural background’ soil water repellency in conifer forests of the north-western USA: Its prediction and relationship to wildfire occurrence

NASA Astrophysics Data System (ADS)

Doerr, S. H.; Woods, S. W.; Martin, D. A.; Casimiro, M.

2009-06-01

SummarySoils under a wide range of vegetation types exhibit water repellency following the passage of a fire. This is viewed by many as one of the main causes for accelerated post-fire runoff and soil erosion and it has often been assumed that strong soil water repellency present after wildfire is fire-induced. However, high levels of repellency have also been reported under vegetation types not affected by fire, and the question arises to what degree the water repellency observed at burnt sites actually results from fire. This study aimed at determining 'natural background' water repellency in common coniferous forest types in the north-western USA. Mature or semi-mature coniferous forest sites ( n = 81), which showed no evidence of recent fires and had at least some needle cast cover, were sampled across six states. After careful removal of litter and duff at each site, soil water repellency was examined in situ at the mineral soil surface using the Water Drop Penetration Time (WDPT) method for three sub-sites, followed by collecting near-surface mineral soil layer samples (0-3 cm depth). Following air-drying, samples were further analyzed for repellency using WDPT and contact angle ( θsl) measurements. Amongst other variables examined were dominant tree type, ground vegetation, litter and duff layer depth, slope angle and aspect, elevation, geology, and soil texture, organic carbon content and pH. 'Natural background' water repellency (WDPT > 5 s) was detected in situ and on air-dry samples at 75% of all sites examined irrespective of dominant tree species ( Pinus ponderosa, Pinus contorta, Picea engelmanii and Pseudotsuga menziesii). These findings demonstrate that the soil water repellency commonly observed in these forest types following burning is not necessarily the result of recent fire but can instead be a natural characteristic. The notion of a low background water repellency being typical for long-unburnt conifer forest soils of the north-western USA is therefore incorrect. It follows that, where pre-fire water repellency levels are not known or highly variable, post-fire soil water repellency conditions are an unreliable indicator in classifying soil burn severity. The terrain and soil variables examined showed, overall, no convincing relationship with the repellency levels observed ( R2 < 0.15) except that repellency was limited in soils (i) developed over meta-sedimentary lithology and (ii) with clay contents >4%. This suggests that water repellency levels cannot be predicted with confidence from common terrain or soil variables.

'Natural background' soil water repellency in conifer forests of the north-western USA: Its prediction and relationship to wildfire occurrence

USGS Publications Warehouse

Doerr, S.H.; Woods, S.W.; Martin, D.A.; Casimiro, M.

2009-01-01

Soils under a wide range of vegetation types exhibit water repellency following the passage of a fire. This is viewed by many as one of the main causes for accelerated post-fire runoff and soil erosion and it has often been assumed that strong soil water repellency present after wildfire is fire-induced. However, high levels of repellency have also been reported under vegetation types not affected by fire, and the question arises to what degree the water repellency observed at burnt sites actually results from fire. This study aimed at determining 'natural background' water repellency in common coniferous forest types in the north-western USA. Mature or semi-mature coniferous forest sites (n = 81), which showed no evidence of recent fires and had at least some needle cast cover, were sampled across six states. After careful removal of litter and duff at each site, soil water repellency was examined in situ at the mineral soil surface using the Water Drop Penetration Time (WDPT) method for three sub-sites, followed by collecting near-surface mineral soil layer samples (0-3 cm depth). Following air-drying, samples were further analyzed for repellency using WDPT and contact angle (??sl) measurements. Amongst other variables examined were dominant tree type, ground vegetation, litter and duff layer depth, slope angle and aspect, elevation, geology, and soil texture, organic carbon content and pH. 'Natural background' water repellency (WDPT > 5 s) was detected in situ and on air-dry samples at 75% of all sites examined irrespective of dominant tree species (Pinus ponderosa, Pinus contorta, Picea engelmanii and Pseudotsuga menziesii). These findings demonstrate that the soil water repellency commonly observed in these forest types following burning is not necessarily the result of recent fire but can instead be a natural characteristic. The notion of a low background water repellency being typical for long-unburnt conifer forest soils of the north-western USA is therefore incorrect. It follows that, where pre-fire water repellency levels are not known or highly variable, post-fire soil water repellency conditions are an unreliable indicator in classifying soil burn severity. The terrain and soil variables examined showed, overall, no convincing relationship with the repellency levels observed (R2 < 0.15) except that repellency was limited in soils (i) developed over meta-sedimentary lithology and (ii) with clay contents >4%. This suggests that water repellency levels cannot be predicted with confidence from common terrain or soil variables. ?? 2009 Elsevier B.V.

NGEE Arctic Tram: Continuous Soil Moisture and Temperature Measurements across Low- and High-Centered Polygonal Ground, Barrow, Alaska, 2014-2016

DOE Office of Scientific and Technical Information (OSTI.GOV)

Baptiste Dafflon; Margaret Torn

This data set reports the continuous soil moisture and temperature measurements collected from August of 2014 to September of 2016 along the footprint of the NGEE Arctic Tram. Soil moisture and temperature sensors are installed adjacent to the Tram at 8 locations of varying land surface types across the low-centered and high-centered polygonal ground. While the Tram operates seasonally these soil measurements are recorded year around. Data for the remainder of 2016 and 2017 will be added when available.

Americium-241 uptake by Bahiagrass as influenced by soil type, lime, and organic matter

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hoyt, G.D.; Adriano, D.C.

1979-07-01

Availability of /sup 241/Am to bahiagrass (Paspalum notatum), a major forage crop in the southeastern US, was studied under greenhouse conditions using two soil types, two rates of lime, and four rates of organic matter. The plants were grown in pots until three clippings were obtained. Americium-241 concentrations in plant tissues from the unlimed Dothan (24% clay) soil were, on the average, approximately twice as high as those from unlimed Troup (10% clay) soil. Lime significantly reduced /sup 241/Am uptake from both soils. The americium concentration ratios (americium concentration in dry plant tissue/average americium concentration in dry soil) for limedmore » treatments were, in general, one order of magnitude lower than those for unlimed treatments. Organic matter, added to the soils as bermuda grass hay, somewhat reduced /sup 241/Am uptake, especially when added at high rates in unlimed soils. The effect of lime on uptake could be attributed to immobilization of americium ions external to the roots as a result of decreased solubility of this radionuclide and/or antagonistic effect of increased calcium ion concentration in the soil solution on americium ions. The effect of organic matter on uptake could be attributed to its fixing capacity for metals.« less

Soil process-oriented modelling of within-field variability based on high-resolution 3D soil type distribution maps.

NASA Astrophysics Data System (ADS)

Bönecke, Eric; Lück, Erika; Gründling, Ralf; Rühlmann, Jörg; Franko, Uwe

2016-04-01

Today, the knowledge of within-field variability is essential for numerous purposes, including practical issues, such as precision and sustainable soil management. Therefore, process-oriented soil models have been applied for a considerable time to answer question of spatial soil nutrient and water dynamics, although, they can only be as consistent as their variation and resolution of soil input data. Traditional approaches, describe distribution of soil types, soil texture or other soil properties for greater soil units through generalised point information, e.g. from classical soil survey maps. Those simplifications are known to be afflicted with large uncertainties. Varying soil, crop or yield conditions are detected even within such homogenised soil units. However, recent advances of non-invasive soil survey and on-the-go monitoring techniques, made it possible to obtain vertical and horizontal dense information (3D) about various soil properties, particularly soil texture distribution which serves as an essential soil key variable affecting various other soil properties. Thus, in this study we based our simulations on detailed 3D soil type distribution (STD) maps (4x4 m) to adjacently built-up sufficient informative soil profiles including various soil physical and chemical properties. Our estimates of spatial STD are based on high-resolution lateral and vertical changes of electrical resistivity (ER), detected by a relatively new multi-sensor on-the-go ER monitoring device. We performed an algorithm including fuzzy-c-mean (FCM) logic and traditional soil classification to estimate STD from those inverted and layer-wise available ER data. STD is then used as key input parameter for our carbon, nitrogen and water transport model. We identified Pedological horizon depths and inferred hydrological soil variables (field capacity, permanent wilting point) from pedotransferfunctions (PTF) for each horizon. Furthermore, the spatial distribution of soil organic carbon (SOC), as essential input variable, was predicted by measured soil samples and associated to STD of the upper 30 cm. The comprehensive and high-resolution (4x4 m) soil profile information (up to 2 m soil depth) were then used to initialise a soil process model (Carbon and Nitrogen Dynamics - CANDY) for soil functional modelling (daily steps of matter fluxes, soil temperature and water balances). Our study was conducted on a practical field (~32,000 m²) of an agricultural farm in Central Germany with Chernozem soils under arid conditions (average rainfall < 550 mm). This soil region is known to have differences in soil structure mainly occurring within the subsoil, since topsoil conditions are described as homogenous. The modelled soil functions considered local climate information and practical farming activities. Results show, as expected, distinguished functional variability, both on spatial and temporal resolution for subsoil evident structures, e.g. visible differences for available water capacity within 0-100 cm but homogenous conditions for the topsoil.

Transport and fate of nitrate within soil units of glacial origin

NASA Astrophysics Data System (ADS)

Moore, Suzanna L.; Peterson, Eric W.

2007-08-01

Questions concerning the influence of soil type and crop cover on the fate and transport of nitrate (NO{3/-}) were examined. During a growing season, soils derived from glacial material underlying either corn or soybeans were sampled for levels of NO{3/-} within the pore water. Measured levels of NO{3/-} ranged from below detection limit to 14.9 g NO{3/-} per kilogram of soil (g/kg). In fields with the same crop cover, the silty-clayey soil exhibited a greater decrease in NO{3/-} levels with depth than the sandier soil. Crop uptake of NO{3/-} occurs within the root zone; however, the type of crop cover did not have a direct impact on the fate or transport during the growing season. The soils underlying soybeans had an increase in NO{3/-} levels following harvest, suggesting that the decomposition of the soybean roots contributed to the net gain of NO{3/-} in the shallow soil. For all of the soil types, conditions below 100 cm are conducive for microbial denitrification, with both a high water saturation level (>60%) and moderate organic carbon content (1-2%). At depths below 100 cm, temporal differences in NO{3/-} levels of over a magnitude, up to a 95% reduction, were recorded in the soil units as the growing season progressed. Physical properties that control the transport of NO{3/-} or denitrification have a larger influence on NO{3/-} levels than crop type.

Relationship among soil surface properties, hydrology and nitrogen cycling along a climatological gradient in drylands

NASA Astrophysics Data System (ADS)

Zaady, E.; Segoli, M.; Eldridge, D. J.; Groffman, P. M.; Boeken, B.; Shachak, M.

2009-04-01

Primary production and nutrient cycling in dryland systems are limited by water supply. There are two groups of primary producers, high biomass production plants and low biomass producing organisms found in biological soil crusts (BSC's), which control energy flow, nutrient cycling and hydrology. Biological or biogenic soil crusts are common in the world's drylands, from dry sub-humid to hyper-arid systems. The crusts are formed by communities of microphytes, mainly cyanobacteria, green algae, mosses, and lichens. The extracellular polysaccharide materials produced by the crust organisms attach soil particles, creating a solid horizontal layer of crust. Biological soil crusts modify soil quality by (1) aggregating soil particles, thereby reducing wind and water erosion; (2) reducing water infiltration, causing overland water run-off; and (3) N fixation and C sequestration. Dryland landscapes are two phase mosaic composed of BSC and high production patches. Development or loss of BSC may trigger changes in the spatial distribution of the patch types and therefore transitions between functional and degraded ecosystem states. We present a conceptual model depicting the function of each patch type and the link between them. Taking into account the contrast between low and high vegetation cover of dryland systems and their role in controlling soil nitrogen and water flows. The model describes the functioning of dryland systems with low biomass producing crust organisms cover, low rainfall, low top soil water and production, which cause low infiltration rate, low N uptake, nitrate accumulation, high evaporation and runoff. This leads to leaching of nitrates, oxygen depletion with high anaerobic conditions, high denitrification rates and N loss, resulting in low plant cover and soil organic matter i.e., degraded soil. It also depicts the functioning of the high production plants under low rainfall regimes resulting in low rates of N and energy flows. The model shows that when the two patches are combined into a source-sink system there is a synergetic effect increasing productivity and diversity, and N cycling and hydrology. The strength of the synergism depends on the climatological gradient. Correspondence to: Eli Zaady (Email: zaadye@volcani.agri.gov.il).

Cowpea Nodules Harbor Non-rhizobial Bacterial Communities that Are Shaped by Soil Type Rather than Plant Genotype.

PubMed

Leite, Jakson; Fischer, Doreen; Rouws, Luc F M; Fernandes-Júnior, Paulo I; Hofmann, Andreas; Kublik, Susanne; Schloter, Michael; Xavier, Gustavo R; Radl, Viviane

2016-01-01

Many studies have been pointing to a high diversity of bacteria associated to legume root nodules. Even though most of these bacteria do not form nodules with legumes themselves, it was shown that they might enter infection threads when co-inoculated with rhizobial strains. The aim of this work was to describe the diversity of bacterial communities associated with cowpea ( Vigna unguiculata L. Walp) root nodules using 16S rRNA gene amplicon sequencing, regarding the factors plant genotype and soil type. As expected, Bradyrhizobium was the most abundant genus of the detected genera. Furthermore, we found a high bacterial diversity associated to cowpea nodules; OTUs related to the genera Enterobacter, Chryseobacterium, Sphingobacterium , and unclassified Enterobacteriacea were the most abundant. The presence of these groups was significantly influenced by the soil type and, to a lesser extent, plant genotype. Interestingly, OTUs assigned to Chryseobacterium were highly abundant, particularly in samples obtained from an Ultisol soil. We confirmed their presence in root nodules and assessed their diversity using a target isolation approach. Though their functional role still needs to be addressed, we postulate that Chryseobacterium strains might help cowpea plant to cope with salt stress in semi-arid regions.

Seismic response of elevated rectangular water tanks considering soil structure interaction

NASA Astrophysics Data System (ADS)

Visuvasam, J.; Simon, J.; Packiaraj, J. S.; Agarwal, R.; Goyal, L.; Dhingra, V.

2017-11-01

The overhead staged water tanks are susceptible for high lateral forces during earthquakes. Due to which, the failure of beam-columns joints, framing elements and toppling of tanks arise. To avoid such failures, they are analyzed and designed for lateral forced induced by devastating earthquakes assuming the base of the structures are fixed and considering functional needs, response reduction, soil types and severity of ground shaking. In this paper, the flexible base was provided as spring stiffness in order to consider the effect of soil properties on the seismic behaviour of water tanks. A linear time history earthquake analysis was performed using SAP2000. Parametric studies have been carried out based on various types of soils such as soft, medium and hard. The soil stiffness values highly influence the time period and base shear of the structure. The ratios of time period of flexible to fixed base and base shear of flexible to fixed base were observed against capacities of water tank and the overall height of the system. The both responses are found to be increased as the flexibility of soil medium decreases

Survival and Growth of Individual Trees in Mixed-species Plantations of Bottomland Hardwoods on 2 Mississippi Delta Soil Types

Treesearch

Jefferey C. Goelz

2001-01-01

Water oak (Quercus nigra L.[Fagaceae]), Nuttall oak (Q. nuttallii Palmer), and green ash (Fraxinus pennsylvanica Marsh. [Oleaceae]) were planted in mixtures at 2 spacings, 1.8 and 2.7m (6 and 9 ft) triangular spacing, on 2 contrasting soil types: Sharkey and Dundee. Survival was high for green ash and...

Investigations of adaptation mechanisms of different halophytes types in different soil salinity conditions (Southern Central Siberia, Russia)

NASA Astrophysics Data System (ADS)

Slyusar, Natalia; Pechurkin, Nickolay

High salt concentration in the soil is one of the limiting factors affecting plant growth and development. However, there are plants that are physiologically adapted to high salts concen-trations -halophytes. Studies of halophytes reveals mechanisms of adaptation to this factor. Investigations were conducted in the steppe zone of Southern Central Siberia (Russia, Khaka-sia), nearest coastal zone of the Lake Kurinka. The work was carried on route and stationary methods. As a results was conducted about 100 geobotanical descriptions, was defined species composition, covering, vertical and horizontal structure of plant communities, the productivity of above ground dry phytomass. As a result of field work was identified various types of plant communities, that are located on soils with a salinity degree are 0,2 -7,16 g / l. Type of saline -sulfate-sodium. Suaeda plant communities was located in the meadow-saline soil (soil salinity degree 5 -7 g / l). The dominant is euhalophyte Suaeda linifolia Pall. and subdominant is glycohalophyte Puccinellia tenuissima. A plant community has two layers. Total covering is 50 -55During the study period (2004 -2009), the change was observed in the soil salinity degree in the range of 2.27 -7.16 g / l. The plan community productivity varied from 99 to 201 g/m2 by years of research. Also was noted that the salt amount in the plants biomass varies depending on the type of halophyte. In the cells of euhalophyte Suaeda linifolia the salt amount was 10-35The investigation noted that relations between the main photosynthetic pigments (chlorophylls and carotenoids) have changes depending on the type of halophyte. Thus, in typical glycohalophyte Puccinellia tenuissima, Elytrigia repens and Phragmites australis chlorophyll content remained relatively high during the summer period and were 0,74, 0,61 and 0,53

Predictive mapping of soil organic carbon in wet cultivated lands using classification-tree based models: the case study of Denmark.

PubMed

Bou Kheir, Rania; Greve, Mogens H; Bøcher, Peder K; Greve, Mette B; Larsen, René; McCloy, Keith

2010-05-01

Soil organic carbon (SOC) is one of the most important carbon stocks globally and has large potential to affect global climate. Distribution patterns of SOC in Denmark constitute a nation-wide baseline for studies on soil carbon changes (with respect to Kyoto protocol). This paper predicts and maps the geographic distribution of SOC across Denmark using remote sensing (RS), geographic information systems (GISs) and decision-tree modeling (un-pruned and pruned classification trees). Seventeen parameters, i.e. parent material, soil type, landscape type, elevation, slope gradient, slope aspect, mean curvature, plan curvature, profile curvature, flow accumulation, specific catchment area, tangent slope, tangent curvature, steady-state wetness index, Normalized Difference Vegetation Index (NDVI), Normalized Difference Wetness Index (NDWI) and Soil Color Index (SCI) were generated to statistically explain SOC field measurements in the area of interest (Denmark). A large number of tree-based classification models (588) were developed using (i) all of the parameters, (ii) all Digital Elevation Model (DEM) parameters only, (iii) the primary DEM parameters only, (iv), the remote sensing (RS) indices only, (v) selected pairs of parameters, (vi) soil type, parent material and landscape type only, and (vii) the parameters having a high impact on SOC distribution in built pruned trees. The best constructed classification tree models (in the number of three) with the lowest misclassification error (ME) and the lowest number of nodes (N) as well are: (i) the tree (T1) combining all of the parameters (ME=29.5%; N=54); (ii) the tree (T2) based on the parent material, soil type and landscape type (ME=31.5%; N=14); and (iii) the tree (T3) constructed using parent material, soil type, landscape type, elevation, tangent slope and SCI (ME=30%; N=39). The produced SOC maps at 1:50,000 cartographic scale using these trees are highly matching with coincidence values equal to 90.5% (Map T1/Map T2), 95% (Map T1/Map T3) and 91% (Map T2/Map T3). The overall accuracies of these maps once compared with field observations were estimated to be 69.54% (Map T1), 68.87% (Map T2) and 69.41% (Map T3). The proposed tree models are relatively simple, and may be also applied to other areas. Copyright 2010 Elsevier Ltd. All rights reserved.

Effects of plastic mulches and high tunnel raspberry production systems on soil physicochemical quality indicators

NASA Astrophysics Data System (ADS)

Domagała-Świątkiewicz, Iwona; Siwek, Piotr

2018-01-01

In horticulture, degradable materials are desirable alternatives to plastic films. Our aim was to study the impact of soil plastic mulching on the soil properties in the high tunnel and open field production systems of raspberry. The raised beds were mulched with a polypropylene non-woven and two degradable mulches: polypropylene with a photodegradant and non-woven polylactide. The results indicated that the system of raspberry production, as well as the type of mulching had significant impact on soil organic carbon stock, moisture content and water stable aggregate amount. Soils taken from the open field system had a lower bulk density and water stability aggregation index, but higher organic carbon and capillary water content as compared to soils collected from high tunnel conditions. In comparison with the open field system, soil salinity was also found to be higher in high tunnel, as well as with higher P, Mg, Ca, S, Na and B content. Furthermore, mulch covered soils had more organic carbon amount than the bare soils. Soil mulching also enhanced the water capacity expressed as a volume of capillary water content. In addition, mulching improved the soil structure in relation to the bare soil, in particular, in open field conditions. The impact of the compared mulches on soil quality indicators was similar.

Effect of organic materials on the chemical properties of saline soil in the Yellow River Delta of China

NASA Astrophysics Data System (ADS)

Yu, Yan; Liu, Jie; Liu, Chunmeng; Zong, Shuang; Lu, Zhaohua

2015-06-01

A 180-day incubation experiment was conducted to investigate the effect of different organic materials on the chemical properties of coastal soil with high salinity and relatively low pH. Four organic materials (three kinds of plant residues: straw, composted straw, and fresh reed; and one kind of poultry manure: chicken manure) were applied at a ratio of 15 g·kg-1 to samples of costal saline soil from the Yellow River Delta of China. The results showed that the soil pH and exchangeable sodium percentage (ESP) decreased, whereas soil cation exchangeable capacity (CEC) and macronutrient concentrations increased, regardless of the type of organic material used. All treatments showed a remarkable increase in soil soluble organic carbon (SOC) during the 180-day incubation. The peak values of SOC in descending order were chicken manure, reed, composted straw, straw, and control soil. At the end of incubation, the highest level of SOC occurred in the straw-amended soil, followed by composted straw, reed, and chicken manureamended soils. Soil respiration rate and available nitrogen were significantly influenced by the type of material used. Although reed-amended soil had a relatively high SOC and respiration rate, the ESP was reduced the least. Considering the possible risk of heavy metals caused by chicken manure, it is proposed that straw and composted straw are the more efficient materials to use for reclaiming costal saline soil and improving the availability of macronutrients.

Bacterial community composition in Brazilian Anthrosols and adjacent soils characterized using culturing and molecular identification.

PubMed

O'Neill, B; Grossman, J; Tsai, M T; Gomes, J E; Lehmann, J; Peterson, J; Neves, E; Thies, J E

2009-07-01

Microbial community composition was examined in two soil types, Anthrosols and adjacent soils, sampled from three locations in the Brazilian Amazon. The Anthrosols, also known as Amazonian dark earths, are highly fertile soils that are a legacy of pre-Columbian settlement. Both Anthrosols and adjacent soils are derived from the same parent material and subject to the same environmental conditions, including rainfall and temperature; however, the Anthrosols contain high levels of charcoal-like black carbon from which they derive their dark color. The Anthrosols typically have higher cation exchange capacity, higher pH, and higher phosphorus and calcium contents. We used culture media prepared from soil extracts to isolate bacteria unique to the two soil types and then sequenced their 16S rRNA genes to determine their phylogenetic placement. Higher numbers of culturable bacteria, by over two orders of magnitude at the deepest sampling depths, were counted in the Anthrosols. Sequences of bacteria isolated on soil extract media yielded five possible new bacterial families. Also, a higher number of families in the bacteria were represented by isolates from the deeper soil depths in the Anthrosols. Higher bacterial populations and a greater diversity of isolates were found in all of the Anthrosols, to a depth of up to 1 m, compared to adjacent soils located within 50-500 m of their associated Anthrosols. Compared to standard culture media, soil extract media revealed diverse soil microbial populations adapted to the unique biochemistry and physiological ecology of these Anthrosols.

Impact of soil type, moisture, and depth on swede midge (Diptera: Cecidomyiidae) pupation and emergence.

PubMed

Chen, Mao; Shelton, Anthony M

2007-12-01

Contarinia nasturtii (Kieffer) (Diptera: Cecidomyiidae), a common insect pest in Europe and a new invasive pest in North America, causes severe damage to cruciferous crops. Currently, many counties in Canada and the United States in which C. nasturtii has not been previously reported are at risk of being infested by C. nasturtii. Effectiveness of chemical control is limited, especially under high population pressure in fields, because the cryptic habits of C. nasturtii protect them from insecticidal sprays. Alternative management strategies against C. nasturtii that are needed to protect crucifers and soil management for the pupal stage were studied as one option. Six different types of soils (loam fine sand, fine sand, clay loam, muck, Chenango shale loam, and silt loam soil) were collected from commercial cabbage fields in New York and studied in the laboratory for their impact on C. nasturtii pupation and emergence. The results indicated that extremely wet or dry soils significantly hindered C. nasturtii emergence, regardless of soil type, suggesting that soil type alone may not be a major factor regulating C. nasturtii abundance. Optimal moisture content for C. nasturtii emergence varied for different soils. Most C. nasturtii pupated within the top 1 cm of soil. Furthermore, we found that >5 cm of soil cover effectively reduced the emergence number and delayed the time of emergence. Based on these results, we suggest that soil manipulation (moisture content and cultivation practices) should be considered as an important component in an overall integrated pest management program for C. nasturtii.

New Insights into How Increases in Fertility Improve the Growth of Rice at the Seedling Stage in Red Soil Regions of Subtropical China

PubMed Central

Li, Yilin; Shi, Weiming; Wang, Xingxiang

2014-01-01

The differences in rhizosphere nitrification activities between high- and low- fertility soils appear to be related to differences in dissolved oxygen concentrations in the soil, implying a relationship to differences in the radial oxygen loss (ROL) of rice roots in these soils. A miniaturised Clark-type oxygen microelectrode system was used to determine rice root ROL and the rhizosphere oxygen profile, and rhizosphere nitrification activity was studied using a short-term nitrification activity assay. Rice planting significantly altered the oxygen cycling in the water-soil system due to rice root ROL. Although the oxygen content in control high-fertility soil (without rice plants) was lower than that in control low-fertility soil, high rice root ROL significantly improved the rhizosphere oxygen concentration in the high-fertility soil. High soil fertility improved the rice root growth and root porosity as well as rice root ROL, resulting in enhanced rhizosphere nitrification. High fertility also increased the content of nitrification-induced nitrate in the rhizosphere, resulting in enhanced ammonium uptake and assimilation in the rice. Although high ammonium pools in the high-fertility soil increased rhizosphere nitrification, rice root ROL might also contribute to rhizosphere nitrification improvement. This study provides new insights into the reasons that an increase in soil fertility may enhance the growth of rice. Our results suggest that an amendment of the fertiliser used in nutrient- and nitrification-poor paddy soils in the red soil regions of China may significantly promote rice growth and rice N nutrition. PMID:25291182

Arsenic-phosphorus interactions in the soil-plant-microbe system: Dynamics of uptake, suppression and toxicity to plants.

PubMed

Anawar, Hossain M; Rengel, Zed; Damon, Paul; Tibbett, Mark

2018-02-01

High arsenic (As) concentrations in the soil, water and plant systems can pose a direct health risk to humans and ecosystems. Phosphate (Pi) ions strongly influence As availability in soil, its uptake and toxicity to plants. Better understanding of As(V)-Pi interactions in soils and plants will facilitate a potential remediation strategy for As contaminated soils, reducing As uptake by crop plants and toxicity to human populations via manipulation of soil Pi content. However, the As(V)-Pi interactions in soil-plant systems are complex, leading to contradictory findings among different studies. Therefore, this review investigates the role of soil type, soil properties, minerals, Pi levels in soil and plant, Pi transporters, mycorrhizal association and microbial activities on As-Pi interactions in soils and hydroponics, and uptake by plants, elucidate the key mechanisms, identify key knowledge gaps and recommend new research directions. Although Pi suppresses As uptake by plants in hydroponic systems, in soils it could either increase or decrease As availability and toxicity to plants depending on the soil types, properties and charge characteristics. In soil, As(V) availability is typically increased by the addition of Pi. At the root surface, the Pi transport system has high affinity for Pi over As(V). However, Pi concentration in plant influences the As transport from roots to shoots. Mycorrhizal association may reduce As uptake via a physiological shift to the mycorrhizal uptake pathway, which has a greater affinity for Pi over As(V) than the root epidermal uptake pathway. Copyright © 2017 Elsevier Ltd. All rights reserved.

Multifunctionality is affected by interactions between green roof plant species, substrate depth, and substrate type.

PubMed

Dusza, Yann; Barot, Sébastien; Kraepiel, Yvan; Lata, Jean-Christophe; Abbadie, Luc; Raynaud, Xavier

2017-04-01

Green roofs provide ecosystem services through evapotranspiration and nutrient cycling that depend, among others, on plant species, substrate type, and substrate depth. However, no study has assessed thoroughly how interactions between these factors alter ecosystem functions and multifunctionality of green roofs. We simulated some green roof conditions in a pot experiment. We planted 20 plant species from 10 genera and five families (Asteraceae, Caryophyllaceae, Crassulaceae, Fabaceae, and Poaceae) on two substrate types (natural vs. artificial) and two substrate depths (10 cm vs. 30 cm). As indicators of major ecosystem functions, we measured aboveground and belowground biomasses, foliar nitrogen and carbon content, foliar transpiration, substrate water retention, and dissolved organic carbon and nitrates in leachates. Interactions between substrate type and depth strongly affected ecosystem functions. Biomass production was increased in the artificial substrate and deeper substrates, as was water retention in most cases. In contrast, dissolved organic carbon leaching was higher in the artificial substrates. Except for the Fabaceae species, nitrate leaching was reduced in deep, natural soils. The highest transpiration rates were associated with natural soils. All functions were modulated by plant families or species. Plant effects differed according to the observed function and the type and depth of the substrate. Fabaceae species grown on natural soils had the most noticeable patterns, allowing high biomass production and high water retention but also high nitrate leaching from deep pots. No single combination of factors enhanced simultaneously all studied ecosystem functions, highlighting that soil-plant interactions induce trade-offs between ecosystem functions. Substrate type and depth interactions are major drivers for green roof multifunctionality.

Typical agricultural diffuse herbicide sorption with agricultural waste-derived biochars amended soil of high organic matter content.

PubMed

Ouyang, Wei; Zhao, Xuchen; Tysklind, Mats; Hao, Fanghua

2016-04-01

Biochar application has been identified as the effective soil amendment and the materials to control the diffuse herbicide pollution. The atrazine was selected as the typical diffuse herbicide pollutant as the dominant proportion in applications. The biochar treated from four types of crops biomass were added to soil with high organic matter content. The basic sorption characteristics of biocahrs from corn cob (CC), corn stalk (CS), soybean straw (SS), rice straw (RS) and corn stalk paralyzed with 5% of ammonium dihydrogen phosphate (ACS) were analyzed, along with the comparison of the sorption difference of the raw soil and soil amended with biochars at four levels of ratio (0.5%, 1.0%, 3.0% and 5.0%). It was found that the linear distribution isotherm of raw soil was much effective due to the high organic matter background concentration. The addition of five types of biochars under two kinds of initial atrazine concentration (1 mg/L and 20 mg/L) demonstrated the sorption variances. Results showed the soil amended with RS and CS biochar had the biggest removal rate in four regular biochars and the removal rate of the ACS was the biggest. The sorption coefficient and the normalized sorption coefficient from Freundlich modeling presented the isothermal sorption characteristics of atrazine with soil of high organic matter content. The normalized sorption coefficient increased with the equilibrium concentration decreased in the biochar amended soil, which indicated the sorption performance will be better due to the low atrazine concentration in practice. Results showed that biochar amendment is the effective way to prevent leakage of diffuse herbicide loss. Copyright © 2016 Elsevier Ltd. All rights reserved.

The Effects of Soil Type, Particle Size, Temperature, and Moisture on Reproduction of Belonolaimus longicaudatus.

PubMed

Robbins, R T; Barker, K R

1974-01-01

Effects of soil type, particle size, temperature, and moisture on the reproduction of Belonolaimus longicaudatus were investigated under greenhouse conditions. Nematode increases occurred only in soils with a minimum of 80% sand and a maximum of 10% clay. Optimum soil particle size for reproduction of the Tarboro, N.C. and Tifton, Ga. populations of the nematode was near that of 120-370 mum (65-mesh) silica sand. Reproduction was greatest at 25-30 C. Some reproduction by the Tifton, Ga. population occurred at 35 C, whereas the Tarboro, N.C. population declined, as compared to the initial inoculum. Both populations reproduced slightly at 20 C. Nematode reproduction was greater at a moisture level of 7% than at a high of 30% or a low of 2%. Reproduction occurred at the high moisture level only when the nutrient solution was aerated.

Soil Quality of Restinga Forest: Organic Matter and Aluminum Saturation

NASA Astrophysics Data System (ADS)

Rodrigues Almeida Filho, Jasse; Casagrande, José Carlos; Martins Bonilha, Rodolfo; Soares, Marcio Roberto; Silva, Luiz Gabriel; Colato, Alexandre

2013-04-01

The restinga vegetation (sand coastal plain vegetation) consists of a mosaic of plant communities, which are defined by the characteristics of the substrates, resulting from the type and age of the depositional processes. This mosaic complex of vegetation types comprises restinga forest in advanced (high restinga) and medium regeneration stages (low restinga), each with particular differentiating vegetation characteristics. Of all ecosystems of the Atlantic Forest, restinga is the most fragile and susceptible to anthropic disturbances. The purpose of this study was evaluating the organic matter and aluminum saturation effects on soil quality index (SQI). Two locations were studied: State Park of the Serra do Mar, Picinguaba, in the city of Ubatuba (23°20' e 23°22' S / 44°48' e 44°52' W), and State Park of Cardoso Island in the city of Cananéia (25°03'05" e 25°18'18" S / 47°53'48" e 48° 05'42" W). The soil samples were collect at a depth of 0-10 cm, where concentrate 70% of vegetation root system. Was studied an additive model to evaluate soil quality index. The shallow root system development occurs due to low calcium levels, whose disability limits their development, but also can reflect on delay, restriction or even in the failure of the development vegetation. The organic matter is kept in the soil restinga ecosystem by high acidity, which reduces the decomposition of soil organic matter, which is very poor in nutrients. The base saturation, less than 10, was low due to low amounts of Na, K, Ca and Mg, indicating low nutritional reserve into the soil, due to very high rainfall and sandy texture, resulting in high saturation values for aluminum. Considering the critical threshold to 3% organic matter and for aluminum saturation to 40%, the IQS ranged from 0.95 to 0.1 as increased aluminum saturation and decreased the soil organic matter, indicating the main limitation to the growth of plants in this type of soil, when deforested.

Denitrification potential of different land-use types in an agricultural watershed, lower Mississippi valley

USGS Publications Warehouse

Ullah, S.; Faulkner, S.P.

2006-01-01

Expansion of agricultural land and excessive nitrogen (N) fertilizer use in the Mississippi River watershed has resulted in a three-fold increase in the nitrate load of the river since the early 1950s. One way to reduce this nitrate load is to restore wetlands at suitable locations between croplands and receiving waters to remove run-off nitrate through denitrification. This research investigated denitrification potential (DP) of different land uses and its controlling factors in an agricultural watershed in the lower Mississippi valley (LMV) to help identify sites with high DP for reducing run-off nitrate. Soil samples collected from seven land-use types of an agricultural watershed during spring, summer, fall and winter were incubated in the laboratory for DP determination. Low-elevation clay soils in wetlands exhibited 6.3 and 2.5 times greater DP compared to high-elevation silt loam and low-elevation clay soils in croplands, respectively. DP of vegetated-ditches was 1.3 and 4.2 times that of un-vegetated ditches and cultivated soils, respectively. Soil carbon and nitrogen availability, bulk density, and soil moisture significantly affected DP. These factors were significantly influenced in turn by landscape position and land-use type of the watershed. It is evident from these results that low-elevation, fine-textured soils under natural wetlands are the best locations for mediating nitrate loss from agricultural watersheds in the LMV. Landscape position and land-use types can be used as indices for the assessment/modeling of denitrification potential and identification of sites for restoration for nitrate removal in agricultural watersheds. ?? 2006 Elsevier B.V. All rights reserved.

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Chu, Rosalie K.; Tolic, Nikola

2015-05-19

Soil organic matter (SOM) a complex, heterogeneous mixture of above and belowground plant litter and animal and microbial residues at various degrees of decomposition, is a key reservoir for carbon (C) and nutrient biogeochemical cycling in soil based ecosystems. A limited understanding of the molecular composition of SOM limits the ability to routinely decipher chemical processes within soil and predict accurately how terrestrial carbon fluxes will response to changing climatic conditions and land use. To elucidate the molecular-level structure of SOM, we selectively extracted a broad range of intact SOM compounds by a combination of different organic solvents from soilsmore » with a wide range of C content. Our use of Electrospray ionization (ESI) coupled with Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and a suite of solvents with varying polarity significantly expands the inventory of the types of organic molecules present in soils. Specifically, we found that hexane is selective for lipid-like compounds with very low O:C ratios; water was selective for carbohydrates with high O:C ratios; acetonitrile preferentially extracts lignin, condensed structures, and tannin poly phenolic compounds with O:C > 0.5; methanol has higher selectivity towards compounds characterized with low O:C < 0.5; and hexane, MeOH, ACN and water solvents increase the number and types of organic molecules extracted from soil for a broader range of chemically diverse soil types. Our study of SOM molecules by ESI-FTICR MS revealed new insight into the molecular-level complexity of organics contained in soils.« less

Wet-dry seasonal and vertical geochemical variations in soil water and their driving forces under different land covers in southwest China karst

NASA Astrophysics Data System (ADS)

Wang, Peng; Hu, Bill X.; Wu, Chuanhao; Xu, Kai

2017-04-01

Karst aquifers supply drinking water for 25% of the world's population, and they are, however, vulnerable to climate change. Bimonthly hydrochemical data in karst soil water samples from July 2010 to July 2011 were obtained to reveal the seasonal and vertical geochemical variations in soil water under five vegetation types in Qingmuguan, a small karst catchment in southwest China. Soil water chemistry was dominated by Ca2+, HCO3-, and SO42- because of the dissolution of limestone, dolomite, and gypsum minerals in the strata. The predominant hydrochemical types in soil water were Ca2+-HCO3-, Ca2+-SO42-, and mixed Ca2+-HCO3-SO42-. Ca2+ and HCO3- concentrations ranked in the following order: shrub land > dry land > afforestation farmland > bamboo land > grassland. In warm and wet seasons, the main ion concentrations in soil water from grasslands were low. Na+, K+, Ca2+, Mg2+, HCO3-, SO42-, and Cl- concentrations in soil water from other lands were high. An opposite trend was observed in cold and dry seasons. Marked seasonal variations were observed in Ca2+, HCO3-, and NO3- in soil water from dry land. The main ion concentrations in soil water from bamboo lands decreased as soil depth increased. By contrast, the chemistry of soil water from other lands increased as soil depth increased. Their ions were accumulated in depth. A consistent high and low variation between the main ions in soil water and the contents of carbonate and CO2 was found in the soil. Hydrochemical changes in soil water were regulated by the effects of dilution and soil CO2.

Composition and structure of arbuscular-mycorrhizal communities in El Palmar National Park, Argentina.

PubMed

Velázquez, María S; Cabello, Marta N; Barrera, Marcelo

2013-01-01

The arbuscular-mycorrhizal-fungal (AMF) communities from the El Palmar National Park of Entre Ríos Province, Argentina, were investigated and characterized. The species of AMF present in five distinct vegetation types-gallery forest, grassland, marsh, palm forest, and scrubland-were isolated, identified and quantified over 2 y. Forty-six AMF morphotaxa were found. The composition of the AMF communities differed between the seasons, soil and vegetation types. Seasonal variations were observed in members of the Acaulosporaceae, Archaeosporaceae, Claroideoglomeraceae, Gigasporaceae and Pacisporaceae. Depending on soil type, the AMF-spore communities were dominated by members of one of the two main orders of the Glomeromycota. AMF communities from grassland and palm forest, which occur on sandy soils, comprised primarily members of the Diversisporales, with a high percentage of species of Acaulospora and of Gigasporaceae. Communities from the gallery forest, marsh and scrubland, which occur on loam-clay soils, were composed of members of the Glomerales, with a high percentage of spores from species of Glomus. Thus, both AMF and plant communities would appear to be strongly and similarly influenced by edaphic conditions.

Determining the frequency, depth and velocity of preferential flow by high frequency soil moisture monitoring

NASA Astrophysics Data System (ADS)

Hardie, Marcus; Lisson, Shaun; Doyle, Richard; Cotching, William

2013-01-01

Preferential flow in agricultural soils has been demonstrated to result in agrochemical mobilisation to shallow ground water. Land managers and environmental regulators need simple cost effective techniques for identifying soil - land use combinations in which preferential flow occurs. Existing techniques for identifying preferential flow have a range of limitations including; often being destructive, non in situ, small sampling volumes, or are subject to artificial boundary conditions. This study demonstrated that high frequency soil moisture monitoring using a multi-sensory capacitance probe mounted within a vertically rammed access tube, was able to determine the occurrence, depth, and wetting front velocity of preferential flow events following rainfall. Occurrence of preferential flow was not related to either rainfall intensity or rainfall amount, rather preferential flow occurred when antecedent soil moisture content was below 226 mm soil moisture storage (0-70 cm). Results indicate that high temporal frequency soil moisture monitoring may be used to identify soil type - land use combinations in which the presence of preferential flow increases the risk of shallow groundwater contamination by rapid transport of agrochemicals through the soil profile. However use of high frequency based soil moisture monitoring to determine agrochemical mobilisation risk may be limited by, inability to determine the volume of preferential flow, difficulty observing macropore flow at high antecedent soil moisture content, and creation of artificial voids during installation of access tubes in stony soils.

Moderately haloalkaliphilic actinomycetes in salt-affected soils

NASA Astrophysics Data System (ADS)

Zvyagintsev, D. G.; Zenova, G. M.; Oborotov, G. V.

2009-12-01

It was found that the population density of actinomycetes in solonchaks and saline desert soils varied from hundreds to tens of thousands of colony-forming units (CFUs) per 1 g of soil depending on soil type and was by 1-3 orders of magnitude lower than the number of mycelial bacteria in main soil types. Actinomycetes grow actively in saline soils, and the length of their mycelium reaches 140 m per 1 g of soil. Domination of moderately halophilic, alkaliphilic, and haloalkaliphilic actinomycetes, which grow well under 5% NaCl and pH 8-9, is a specific feature of actinomycetal complexes in saline soils. Representatives of Streptomyces and Micromonospora genera were found among the haloalkaliphilic actinomycetes. Micromonospores demonstrated lower (than streptomycetes) adaptability to high salt concentrations. Investigation of the phylogenetic position of isolated dominant haloalkaliphilic strains of streptomycetes performed on the basis of sequencing of the gene 16S rRNA enabled identifying these strains as Streptomyces pluricolorescens and S. prunicolor.

Response of Soil Inorganic Nitrogen to Land Use and Topographic Position in the Cofre de Perote Volcano (Mexico)

NASA Astrophysics Data System (ADS)

Campos C., Adolfo

2010-08-01

This study addressed the effects of land use and slope position on soil inorganic nitrogen and was conducted in small watersheds. The study covered three land use types: tropical cloud forest, grassland, and coffee crop. To conduct this research, typical slope small watersheds were chosen in each land use type. Slopes were divided into three positions: shoulder, backslope, and footslope. At the center of each slope position, soil sampling was carried out. Soil inorganic nitrogen was measured monthly during a period of 14 months (July 2005-August 2006) with 11 observations. Significant differences in soil NH4 +-N and NO3 --N content were detected for both land use and sampling date effects, as well as for interactions. A significant slope position-by-sampling date interaction was found only in coffee crop for NO3 --N content. In tropical cloud forest and grassland, high soil NH4 +-N and low NO3 --N content were recorded, while soil NO3 --N content was high in coffee crop. Low NO3 --N contents could mean a substantial microbial assimilation of NO3 --N, constituting an important mechanism for nitrogen retention. Across the entire land use set, the relationship between soil temperature and soil inorganic N concentration was described by an exponential decay function ( N = 33 + 2459exp-0.23T, R 2 = 0.44, P < 0.0001). This study also showed that together, soil temperature and gravimetric soil water content explained more variation in soil inorganic N concentration than gravimetric soil water content alone.

Heterogeneity of soil nutrients and subsurface biota in a dryland ecosystem

USGS Publications Warehouse

Housman, D.C.; Yeager, C.M.; Darby, B.J.; Sanford, R.L.; Kuske, C.R.; Neher, D.A.; Belnap, J.

2007-01-01

Dryland ecosystems have long been considered to have a highly heterogeneous distribution of nutrients and soil biota, with greater concentrations of both in soils under plants relative to interspace soils. We examined the distribution of soil resources in two plant communities (dominated by either the shrub Coleogyne ramosissima or the grass Stipa hymenoides) at two locations. Interspace soils were covered either by early successional biological soil crusts (BSCs) or by later successional BSCs (dominated by nitrogen (N)-fixing cyanobacteria and lichens). For each of the 8 plant type??crust type??locations, we sampled the stem, dripline, and 3 interspace distances around each of 3 plants. Soil analyses revealed that only available potassium (Kav) and ammonium concentrations were consistently greater under plants (7 of 8 sites and 6 of 8 sites, respectively). Nitrate and iron (Fe) were greater under plants at 4 sites, while all other nutrients were greater under plants at less than 50% of the sites. In contrast, calcium, copper, clay, phosphorus (P), and zinc were often greater in the interspace than under the plants. Soil microbial biomass was always greater under the plant compared to the interspace. The community composition of N-fixing bacteria was highly variable, with no distinguishable patterns among microsites. Bacterivorous nematodes and rotifers were consistently more abundant under plants (8 and 7 sites, respectively), and fungivorous and omnivorous nematodes were greater under plants at 5 of the 8 sites. Abundance of other soil biota was greater under plants at less than 50% of the sites, but highly correlated with the availability of N, P, Kav, and Fe. Unlike other ecosystems, the soil biota was only infrequently correlated with organic matter. Lack of plant-driven heterogeneity in soils of this ecosystem is likely due to (1) interspace soils covered with BSCs, (2) little incorporation of above-ground plant litter into soils, and/or (3) root deployment patterns. ?? 2007 Elsevier Ltd. All rights reserved.

Lead particle size and its association with firing conditions and range maintenance: implications for treatment.

PubMed

Dermatas, Dimitris; Chrysochoou, Maria

2007-08-01

Six firing range soils were analyzed, representing different environments, firing conditions, and maintenance practices. The particle size distribution and lead (Pb) concentration in each soil fraction were determined for samples obtained from the backstop berms. The main factors that were found to influence Pb fragment size were the type of soil used to construct the berms and the type of weapon fired. The firing of high velocity weapons, i.e., rifles, onto highly angular soils induced significant fragmentation of the bullets and/or pulverization of the soil itself. This resulted in the accumulation of Pb in the finer soil fractions and the spread of Pb contamination beyond the vicinity of the backstop berm. Conversely, the use of clay as backstop and the use of low velocity pistols proved to be favorable for soil clean-up and range maintenance, since Pb was mainly present as large metallic fragments that can be recovered by a simple screening process. Other factors that played important roles in Pb particle size distribution were soil chemistry, firing distance, and maintenance practices, such as the use of water spray for dust suppression and deflectors prior to impact. Overall, coarse Pb particles provide much easier and more cost-effective maintenance, soil clean-up, and remediation via physical separation. Fine Pb particles release Pb more easily, pose an airborne Pb hazard, and require the application of stabilization/solidification treatment methods. Thus, to ensure sustainable firing range operations by means of cost-effective design, maintenance, and clean-up, especially when high velocity weapons are used, the above mentioned factors should be carefully considered.

[Co-occurrence of soil fauna communities with changes in altitude on the northern slope of Changbai Mountain].

PubMed

Tong, Fuchun; Jin, Zhedong; Wang, Qingli; Xiao, Yihua

2003-10-01

The co-occurrence of soil fauna communities at different altitudes may reflect at some extent the relationships among communities, their coexistence, and the replacement of species along the altitude gradient. The continuous or disjunctive distribution of different species along altitude gradient not only reflected the environment variation at altitude gradient, but also the biological and ecological spatiality as well as the adaptability of species. The northern slope of Changbai Moutain has not only a high diversity in soil fauna types and species, but also a high variation of diversity pattern along the altitude gradient, which is a perfect transect for the research of biodiversity and gradient patterns. From 550 m to 2,560 m on the northern slope of Changbai Mountain, twenty-two plots were investigated with an interval of 100 m in altitude. By using Jaccard index, the co-occurrence of soil fauna communities at different altitudes was analyzed. For the species of different life forms or for all the species as a whole, the co-occurrence of soil faunae between neighboring communities was the highest, except for that between different soil fauna types. The peak and valley values of the co-occurrence of soil fauna communities along altitude gradient were matched with their gradient patterns, and the co-occurrence of soil faunae at different layers or all of the soil fauna communities were decreased with increasing altitude difference.

Soil properties discriminating Araucaria forests with different disturbance levels.

PubMed

Bertini, Simone Cristina Braga; Azevedo, Lucas Carvalho Basilio; Stromberger, Mary E; Cardoso, Elke Jurandy Bran Nogueira

2015-04-01

Soil biological, chemical, and physical properties can be important for monitoring soil quality under one of the most spectacular vegetation formation on Atlantic Forest Biome, the Araucaria Forest. Our aim was to identify a set of soil variables capable of discriminating between disturbed, reforested, and native Araucaria forest soils such that these variables could be used to monitor forest recovery and maintenance. Soil samples were collected at dry and rainy season under the three forest types in two state parks at São Paulo State, Brazil. Soil biological, chemical, and physical properties were evaluated to verify their potential to differentiate the forest types, and discriminant analysis was performed to identify the variables that most contribute to the differentiation. Most of physical and chemical variables were sensitive to forest disturbance level, but few biological variables were significantly different when comparing native, reforested, and disturbed forests. Despite more than 20 years following reforestation, the reforested soils were chemically and biologically distinct from native and disturbed forest soils, mainly because of the greater acidity and Al3+ content of reforested soil. Disturbed soils, in contrast, were coarser in texture and contained greater concentrations of extractable P. Although biological properties are generally highly sensitive to disturbance and amelioration efforts, the most important soil variables to discriminate forest types in both seasons included Al3+, Mg2+, P, and sand, and only one microbial attribute: the NO2- oxidizers. Therefore, these five variables were the best candidates, of the variables we employed, for monitoring Araucaria forest disturbance and recovery.

Soil fauna and soil microflora as possible indicators of soil pollution.

PubMed

Eijsackers, H

1983-09-01

Research on biological indicators of soil pollution is hampered by soil variability and temporal and spatial fluctuations of numbers of soil animals. These characters on the other hand promote a high biological diversity in the soil. A high diversity combined with persistent soil pollutants increases the chance to select good indicators. However research on these topics is still limited. Examples of specific indicators are the changed arthropod species patterns due to pesticide influence and the changed soil enzyme activity under the influence of specific heavy metals. Another approach is to look for organisms that give a general indication of soil pollution. In this respect the earthworm species Allolobophora caliginosa proved to be sensitive for different types of manure especially pig manure with copper, for sewage sludge, for municipal waste compost and for fly ash. A third way of indication is by organisms accumulating pollutants. For some heavy metals (Cd, Zn), earthworms are very efficient accumulators. More research is needed especially on the specific relation between biological responses and abiotic soil characteristics.

Unifying the functional diversity in natural and cultivated soils using the overall body-mass distribution of nematodes.

PubMed

Mulder, Christian; Maas, Rob

2017-11-28

Sustainable use of our soils is a key goal for environmental protection. As many ecosystem services are supported belowground at different trophic levels by nematodes, soil nematodes are expected to provide objective metrics for biological quality to integrate physical and chemical soil variables. Trait measurements of body mass carried out at the individual level can in this way be correlated with environmental properties that influence the performance of soil biota. Soil samples were collected across 200 sites (4 soil types and 5 land-use types resulting in 9 combinations) during a long-term monitoring programme in the Netherlands and the functional diversity of nematode communities was investigated. Using three commonly used functional diversity indices applicable to single traits (Divergence, Evenness and Richness), a unified index of overall body-mass distribution is proposed to better illustrate the application of functional metrics as a descriptor of land use. Effects of land use and soil chemistry on the functional diversity of nematodes were demonstrated and a combination of environmental factors accounts for the low functional value of Scots Pine forest soils in comparison to the high functional value of heathland soils, whereas human factors account for the low functional and chemical values of arable fields. These findings show an unexpected high functional vulnerability of nematodes inhabiting clay-rich soils in comparison to sandy soils and support the notion that soil C:N ratio is a major driver of biodiversity. The higher the C:N ratio, the higher the overall diversity, as soil nematodes cope better with nutrient-poor agroecosystems under less intense fertilization. A trait-based way focusing on size distribution of nematodes is proposed to maintain environmental health by monitoring the overall diversity in soil biota, keeping agriculture and forestry sustainable.

Natural 'background' soil water repellency in conifer forests: its prediction and relationship to wildfire occurrence

NASA Astrophysics Data System (ADS)

Doerr, Stefan; Woods, Scott; Martin, Deborah; Casimiro, Marta

2013-04-01

Soils under a wide range of vegetation types exhibit water repellency following the passage of a fire. This is viewed by many as one of the main causes for accelerated post-fire runoff and soil erosion and it has often been assumed that strong soil water repellency present after wildfire is fire-induced. However, high levels of repellency have also been reported under vegetation types not affected by fire, and the question arises to what degree the water repellency observed at burnt sites actually results from fire. This study aimed at determining 'natural background' water repellency in common coniferous forest types in the north-western USA. Mature or semi-mature coniferous forest sites (n = 81), which showed no evidence of recent fires and had at least some needle cast cover, were sampled across six states. After careful removal of litter and duff at each site, soil water repellency was examined in situ at the mineral soil surface using the Water Drop Penetration Time (WDPT) method for three sub-sites, followed by col- lecting near-surface mineral soil layer samples (0-3 cm depth). Following air-drying, samples were fur- ther analyzed for repellency using WDPT and contact angle (hsl) measurements. Amongst other variables examined were dominant tree type, ground vegetation, litter and duff layer depth, slope angle and aspect, elevation, geology, and soil texture, organic carbon content and pH. 'Natural background' water repellency (WDPT > 5 s) was detected in situ and on air-dry samples at 75% of all sites examined irrespective of dominant tree species (Pinus ponderosa, Pinus contorta, Picea engelma- nii and Pseudotsuga menziesii). These findings demonstrate that the soil water repellency commonly observed in these forest types following burning is not necessarily the result of recent fire but can instead be a natural characteristic. The notion of a low background water repellency being typical for long- unburnt conifer forest soils of the north-western USA is therefore incorrect. It follows that, where pre-fire water repellency levels are not known or highly variable, post-fire soil water repellency conditions are an unreliable indicator in classifying soil burn severity. The terrain and soil variables examined showed, overall, no convincing relationship with the repellency levels observed (R2 < 0.15) except that repellency was limited in soils (i) developed over meta-sedimen- tary lithology and (ii) with clay contents >4%. This suggests that water repellency levels cannot be pre- dicted with confidence from common terrain or soil variables. This work is presented in the memory of the late Scott Woods, who was instrumental in the success of this study and an inspiration to us all.

Influence of ozone, precipitation chemistry, and soil type on red spruce (Picea rubens)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taylor, G.E. Jr.; Norby, R.J.; McLaughlin, S.B.

1986-04-01

The response of growth processes in red spruce to ozone, mist chemistry, rain chemistry, and soil type (singly and in combination) was investigated over a four-month period. Precipitation and ozone exposures were based on air chemistry/deposition in high elevation forests of eastern North America. The two soils were from Camels Hump in the Green Mountains of Vermont and Acadia National Park on the Maine coast. Growth was evaluated through analysis of relative growth rates (RGR) and biomass partitioning to root, stem, and needle fractions. The only main treatments that consistently influenced seedling growth were soil type and rain chemistry. Seedlingsmore » grown in Camels Hump soil had significantly less needle, stem, and root biomass and lower RGR. The only influence of precipitation chemistry was greater root and shoot biomass in seedlings experiencing the more acidic rain. It is hypothesized that the physiological mechanism underlying the growth responses of P. rubens is whole-plant allocation of carbon resources.« less

Sensitivity and uncertainty analysis for Abreu & Johnson numerical vapor intrusion model.

PubMed

Ma, Jie; Yan, Guangxu; Li, Haiyan; Guo, Shaohui

2016-03-05

This study conducted one-at-a-time (OAT) sensitivity and uncertainty analysis for a numerical vapor intrusion model for nine input parameters, including soil porosity, soil moisture, soil air permeability, aerobic biodegradation rate, building depressurization, crack width, floor thickness, building volume, and indoor air exchange rate. Simulations were performed for three soil types (clay, silt, and sand), two source depths (3 and 8m), and two source concentrations (1 and 400 g/m(3)). Model sensitivity and uncertainty for shallow and high-concentration vapor sources (3m and 400 g/m(3)) are much smaller than for deep and low-concentration sources (8m and 1g/m(3)). For high-concentration sources, soil air permeability, indoor air exchange rate, and building depressurization (for high permeable soil like sand) are key contributors to model output uncertainty. For low-concentration sources, soil porosity, soil moisture, aerobic biodegradation rate and soil gas permeability are key contributors to model output uncertainty. Another important finding is that impacts of aerobic biodegradation on vapor intrusion potential of petroleum hydrocarbons are negligible when vapor source concentration is high, because of insufficient oxygen supply that limits aerobic biodegradation activities. Copyright © 2015 Elsevier B.V. All rights reserved.

[Characteristics of soil water infiltration in sub-alpine dark coniferous ecosystem of upper reaches of Yangtze River].

PubMed

Yu, Xinxiao; Zhao, Yutao; Zhang, Zhiqiang; Cheng, Genwei

2003-01-01

Dark coniferous forest is the predominant type of vegetation in the upper reaches of Yangtze River. Difference among different types of soil exists. The sand content of soil is higher and the soil texture is coarser in the early stage of forest succession. The sand content of soil decreases with the advancement of the forest succession while that of soil in Abies fabri over-mature forest is the lowest. In slope wash soil, the sand content of soil decreases with the increasing soil depth. The soil porosity and soil water-holding capacity increases and soil bulk density decreases with the advancement of forest succession and decrease of soil depth. The deeper soil depth or the smaller soil water content are, the smaller the unsaturated hydraulic conductivity of soil measured by CGA method. Moreover, the correlation of soil water content with unsaturated hydraulic conductivity of soil can be simulated by an exponential function. The saturated hydraulic conductivity of soil decreases exponentially with the increasing soil depth. The time to attain the stable infiltration rate is different among different soil depth, while the deeper the soil depth is, the longer the time needs. The variation in soil texture, soil physical properties and the high infiltration rate of soil there implicated that there are scarce surface runoff, but abundant in subsurface flow, return flow and seepage, which is the result of regulation by dark coniferous forest on hydrological processes.

Soil Nutrient Assessment for Urban Ecosystems in Hubei, China

PubMed Central

Li, Zhi-guo; Zhang, Guo-shi; Liu, Yi; Wan, Kai-yuan; Zhang, Run-hua; Chen, Fang

2013-01-01

Recent urban landscape vegetation surveys conducted in many cities in China identified numerous plant nutrient deficiencies, especially in newly developed cities. Soil nutrients and soil nutrient management in the cities of Hubei province have not received adequate attention to date. The aims of this study were to characterize the available nutrients of urban soils from nine cities in Hubei province, China, and to assess how soil nutrient status is related to land use type and topography. Soil nutrients were measured in 405 sites from 1,215 soil samples collected from four land use types (park, institutional [including government building grounds, municipal party grounds, university grounds, and garden city institutes], residential, and roadside verges) and three topographies (mountainous [142–425 m a.s.l], hilly [66–112 m a.s.l], and plain [26–30 m a.s.l]). Chemical analyses showed that urban soils in Hubei had high pH and lower soil organic matter, available nitrogen (N), available phosphorus (P), and available boron (B) concentrations than natural soils. Nutrient concentrations were significantly different among land use types, with the roadside and residential areas having greater concentrations of calcium (Ca), sulfur (S), copper (Cu), manganese (Mn), and zinc (Zn) that were not deficient against the recommended ranges. Topographic comparisons showed statistically significant effects for 8 of the 11 chemical variables (p < 0.05). Concentrations of N, Ca, Mg, S, Cu, and Mn in plain cities were greater than those in mountainous cities and show a negative correlation with city elevation. These results provide data on urban soils characteristics in land use types and topography, and deliver significant information for city planners and policy makers. PMID:24086647

Soil nutrient assessment for urban ecosystems in Hubei, China.

PubMed

Li, Zhi-Guo; Zhang, Guo-Shi; Liu, Yi; Wan, Kai-Yuan; Zhang, Run-Hua; Chen, Fang

2013-01-01

Recent urban landscape vegetation surveys conducted in many cities in China identified numerous plant nutrient deficiencies, especially in newly developed cities. Soil nutrients and soil nutrient management in the cities of Hubei province have not received adequate attention to date. The aims of this study were to characterize the available nutrients of urban soils from nine cities in Hubei province, China, and to assess how soil nutrient status is related to land use type and topography. Soil nutrients were measured in 405 sites from 1,215 soil samples collected from four land use types (park, institutional [including government building grounds, municipal party grounds, university grounds, and garden city institutes], residential, and roadside verges) and three topographies (mountainous [142-425 m a.s.l], hilly [66-112 m a.s.l], and plain [26-30 m a.s.l]). Chemical analyses showed that urban soils in Hubei had high pH and lower soil organic matter, available nitrogen (N), available phosphorus (P), and available boron (B) concentrations than natural soils. Nutrient concentrations were significantly different among land use types, with the roadside and residential areas having greater concentrations of calcium (Ca), sulfur (S), copper (Cu), manganese (Mn), and zinc (Zn) that were not deficient against the recommended ranges. Topographic comparisons showed statistically significant effects for 8 of the 11 chemical variables (p < 0.05). Concentrations of N, Ca, Mg, S, Cu, and Mn in plain cities were greater than those in mountainous cities and show a negative correlation with city elevation. These results provide data on urban soils characteristics in land use types and topography, and deliver significant information for city planners and policy makers.

Variability in soil CO2 efflux across distinct urban land cover types

NASA Astrophysics Data System (ADS)

Weissert, Lena F.; Salmond, Jennifer A.; Schwendenmann, Luitgard

2015-04-01

As a main source of greenhouse gases urban areas play an important role in the global carbon cycle. To assess the potential role of urban vegetation in mitigating carbon emissions we need information on the magnitude of biogenic CO2 emissions and its driving factors. We examined how urban land use types (urban forest, parklands, sportsfields) vary in their soil CO2 efflux. We measured soil CO2 efflux and its isotopic signature, soil temperature and soil moisture over a complete growing season in Auckland, New Zealand. Soil physical and chemical properties and vegetation characteristics were also measured. Mean soil CO2 efflux ranged from 4.15 to 12 μmol m-2 s-1. We did not find significant differences in soil CO2 efflux among land cover types due to high spatial variability in soil CO2 efflux among plots. Soil (soil carbon and nitrogen density, texture, soil carbon:nitrogen ratio) and vegetation characteristics (basal area, litter carbon density, grass biomass) were not significantly correlated with soil CO2 efflux. We found a distinct seasonal pattern with significantly higher soil CO2 efflux in autumn (Apr/May) and spring (Oct). In urban forests and sportsfields over 80% of the temporal variation was explained by soil temperature and soil water content. The δ13C signature of CO2 respired from parklands and sportsfields (-20 permil - -25 permil) were more positive compared to forest plots (-29 permil) indicating that parkland and sportsfields had a considerable proportion of C4 grasses. Despite the large intra-urban variability, our results compare to values reported from other, often climatically different cities, supporting the hypothesis of homogenization across urban areas as a result of human management practices.

Estonian soil classification as a tool for recording information on soil cover and its matching with local site types, plant covers and humus forms classifications

NASA Astrophysics Data System (ADS)

Kõlli, Raimo; Tõnutare, Tõnu; Rannik, Kaire; Krebstein, Kadri

2015-04-01

Estonian soil classification (ESC) has been used successfully during more than half of century in soil survey, teaching of soil science, generalization of soil databases, arrangement of soils sustainable management and others. The Estonian normally developed (postlithogenic) mineral soils (form 72.4% from total area) are characterized by mean of genetic-functional schema, where the pedo-ecological position of soils (ie. location among other soils) is given by means of three scalars: (i) 8 stage lithic-genetic scalar (from rendzina to podzols) separates soils each from other by parent material, lithic properties, calcareousness, character of soil processes and others, (ii) 6 stage moisture and aeration conditions scalar (from aridic or well aerated to permanently wet or reductic conditions), and (iii) 2-3 stage soil development scalar, which characterizes the intensity of soil forming processes (accumulation of humus, podzolization). The organic soils pedo-ecological schema, which links with histic postlithogenic soils, is elaborated for characterizing of peatlands superficial mantle (form 23.7% from whole soil cover). The position each peat soil species among others on this organic (peat) soil matrix schema is determined by mean of 3 scalars: (i) peat thickness, (ii) type of paludification or peat forming peculiarities, and (iii) stage of peat decomposition or peat type. On the matrix of abnormally developed (synlithogenic) soils (all together 3.9%) the soil species are positioned (i) by proceeding in actual time geological processes as erosion, fluvial processes (at vicinity of rivers, lakes or sea) or transforming by anthropogenic and technological processes, and (ii) by 7 stage moisture conditions (from aridic to subaqual) of soils. The most important functions of soil cover are: (i) being a suitable environment for plant productivity; (ii) forming adequate conditions for decomposition, transformation and conversion of falling litter (characterized by humus cover type); (iii) being compartment for deposition of humus, individual organic compounds, plant nutrition elements, air and water, and (iv) forming (bio)chemically variegated active space for soil type specific edaphon. For studying of ESC matching with others ecosystem compartments classifications the comparative analysis of corresponding classification schemas was done. It may be concluded that forest and natural grasslands site types as well the plant associations of forests and grasslands correlate (match) well with ESC and therefore these compartments may be adequately expressed on soil cover matrixes. Special interest merits humus cover (in many countries known as humus form), which is by the issue natural body between plant and soil or plant cover and soil cover. The humus cover, which lied on superficial part of soil cover, has been formed by functional interrelationships of plants and soils, reflects very well the local pedo-ecological conditions (both productivity and decomposition cycles) and, therefore, the humus cover types are good indicators for characterizing of local pedo-ecological conditions. The classification of humus covers (humus forms) should be bound with soil classifications. It is important to develop a pedocentric approach in treating of fabric and functioning of natural and agro-ecosystems. Such, based on soil properties, ecosystem approach to management and protection natural resources is highly recommended at least in temperate climatic regions. The sound matching of soil and plant cover is of decisive importance for sustainable functioning of ecosystem and in attaining a good environmental status of the area.

The Diversity of Pea Microsymbionts in Various Types of Soils and Their Effects on Plant Host Productivity

PubMed Central

Wielbo, Jerzy; Podleśna, Anna; Kidaj, Dominika; Podleśny, Janusz; Skorupska, Anna

2015-01-01

The growth and yield of peas cultivated on eight different soils, as well as the diversity of pea microsymbionts derived from these soils were investigated in the present study. The experimental plot was composed of soils that were transferred from different parts of Poland more than a century ago. The soils were located in direct vicinity of each other in the experimental plot. All soils examined contained pea microsymbionts, which were suggested to belong to Rhizobium leguminosarum sv. viciae based on the nucleotide sequence of the partial 16S rRNA gene. PCR-RFLP analyses of the 16S-23S rRNA gene ITS region and nodD alleles revealed the presence of numerous and diversified groups of pea microsymbionts and some similarities between the tested populations, which may have been the result of the spread or displacement of strains. However, most populations retained their own genetic distinction, which may have been related to the type of soil. Most of the tested populations comprised low-effective strains for the promotion of pea growth. No relationships were found between the characteristics of soil and symbiotic effectiveness of rhizobial populations; however, better seed yield was obtained for soil with medium biological productivity inhabited by high-effective rhizobial populations than for soil with high agricultural quality containing medium-quality pea microsymbionts, and these results showed the importance of symbiosis for plant hosts. PMID:26370165

Cowpea Nodules Harbor Non-rhizobial Bacterial Communities that Are Shaped by Soil Type Rather than Plant Genotype

PubMed Central

Leite, Jakson; Fischer, Doreen; Rouws, Luc F. M.; Fernandes-Júnior, Paulo I.; Hofmann, Andreas; Kublik, Susanne; Schloter, Michael; Xavier, Gustavo R.; Radl, Viviane

2017-01-01

Many studies have been pointing to a high diversity of bacteria associated to legume root nodules. Even though most of these bacteria do not form nodules with legumes themselves, it was shown that they might enter infection threads when co-inoculated with rhizobial strains. The aim of this work was to describe the diversity of bacterial communities associated with cowpea (Vigna unguiculata L. Walp) root nodules using 16S rRNA gene amplicon sequencing, regarding the factors plant genotype and soil type. As expected, Bradyrhizobium was the most abundant genus of the detected genera. Furthermore, we found a high bacterial diversity associated to cowpea nodules; OTUs related to the genera Enterobacter, Chryseobacterium, Sphingobacterium, and unclassified Enterobacteriacea were the most abundant. The presence of these groups was significantly influenced by the soil type and, to a lesser extent, plant genotype. Interestingly, OTUs assigned to Chryseobacterium were highly abundant, particularly in samples obtained from an Ultisol soil. We confirmed their presence in root nodules and assessed their diversity using a target isolation approach. Though their functional role still needs to be addressed, we postulate that Chryseobacterium strains might help cowpea plant to cope with salt stress in semi-arid regions. PMID:28163711

Soybean Photosynthesis and Yield as Influenced by Heterodera glycines, Soil Type and Irrigation.

PubMed

Koenning, S R; Barker, K R

1995-03-01

The effects of soil types and soil water matric pressure on the Heterodera glycines-Glycine max interaction were examined in microplots in 1988 and 1989. Reproduction of H. glycines was restricted in fine-textured soils as compared with coarse-textured ones. Final population densities of this pathogen in both years of the study were greater in nonirrigated soils than in irrigated soils. The net photosynthetic rate of soybean (per unit area of leaf) was suppressed only slightly or not at all in response to infection by H. glycines and other stresses. Relative soybean-yield suppression in response to H. glycines was not affected by water content in fine-textured soils, but slopes of the damage functions were steepest in sand, sandy loam, and muck soils at high water content (irrigated plots). Yield restriction of soybean in response to this pathogen under irrigation was equal to or greater than the yield suppression under dry conditions. Although yield potential may be elevated by irrigation when soil-water content is inadequate, supplemental irrigation cannot be used to circumvent nematode damage to soybean.

Estimating soil erosion in Natura 2000 areas located on three semi-arid Mediterranean Islands.

PubMed

Zaimes, George N; Emmanouloudis, Dimitris; Iakovoglou, Valasia

2012-03-01

A major initiative in Europe is the protection of its biodiversity. To accomplish this, specific areas from all countries of the European Union are protected by the establishment of the "Natura 2000" network. One of the major threats to these areas and in general to ecosystems is soil erosion. The objective of this study was to quantitatively estimate surface soil losses for three of these protected areas that are located on semi-arid islands of the Mediterranean. One Natura 2000 area was selected from each of the following islands: Sicily in Italy, Cyprus and Rhodes in Greece. To estimate soil losses, Gerlach troughs were used. These troughs were established on slopes that ranged from 35-40% in four different vegetation types: i) Quercus ilex and Quercus rotundifolia forests, ii) Pinus brutia forests, iii) "Phrygana" shrublands and iv) vineyards. The shrublands had the highest soil losses (270 kg ha(-1) yr(-1)) that were 5-13 times more than the other three vegetation types. Soil losses in these shrublands should be considered a major concern. However, the other vegetation types also had high soil losses (21-50 kg ha(-1) yr(-1)). Conclusively, in order to enhance and conserve the biodiversity of these Natura 2000 areas protective management measures should be taken into consideration to decrease soil losses.

How do peat type, sand addition and soil moisture influence the soil organic matter mineralization in anthropogenically disturbed organic soils?

NASA Astrophysics Data System (ADS)

Säurich, Annelie; Tiemeyer, Bärbel; Don, Axel; Burkart, Stefan

2017-04-01

Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. As a consequence of both drainage induced mineralization and anthropogenic sand mixing, large areas of former peatlands under agricultural use contain soil organic carbon (SOC) at the boundary between mineral and organic soils. Studies on SOC dynamics of such "low carbon organic soils" are rare as the focus of previous studies was mainly either on mineral soils or "true" peat soil. However, the variability of CO2 emissions increases with disturbance and therefore, we have yet to understand the reasons behind the relatively high CO2 emissions of these soils. Peat properties, soil organic matter (SOM) quality and water content are obviously influencing the rate of CO2 emissions, but a systematic evaluation of the hydrological and biogeochemical drivers for mineralization of disturbed peatlands is missing. With this incubation experiment, we aim at assessing the drivers of the high variability of CO2 emissions from strongly anthropogenically disturbed organic soil by systematically comparing strongly degraded peat with and without addition of sand under different moisture conditions and for different peat types. The selection of samples was based on results of a previous incubation study, using disturbed samples from the German Agricultural Soil Inventory. We sampled undisturbed soil columns from topsoil and subsoil (three replicates of each) of ten peatland sites all used as grassland. Peat types comprise six fens (sedge, Phragmites and wood peat) and four bogs (Sphagnum peat). All sites have an intact peat horizon that is permanently below groundwater level and a strongly disturbed topsoil horizon. Three of the fen and two of the bog sites have a topsoil horizon altered by sand-mixing. In addition the soil profile was mapped and samples for the determination of soil hydraulic properties were collected. All 64 soil columns (including four additional reference samples) will be installed in a microcosm system under a constant temperature of 10°C. The water-saturated soil columns will be drained via suction plates at the bottom of the columns by stepwise increase of the suction. The head space of the soil columns will be permanently flushed with moistened synthetic air and CO2 concentrations will be measured via online gas chromatography. First results will be presented.

Structure and function of methanotrophic communities in a landfill-cover soil.

PubMed

Henneberger, Ruth; Lüke, Claudia; Mosberger, Lona; Schroth, Martin H

2012-07-01

In landfill-cover soils, aerobic methane-oxidizing bacteria (MOB) convert CH(4) to CO(2), mitigating emissions of the greenhouse gas CH(4) to the atmosphere. We investigated overall MOB community structure and assessed spatial differences in MOB diversity, abundance and activity in a Swiss landfill-cover soil. Molecular cloning, terminal restriction-fragment length polymorphism (T-RFLP) and quantitative PCR of pmoA genes were applied to soil collected from 16 locations at three different depths to study MOB community structure, diversity and abundance; MOB activity was measured in the field using gas push-pull tests. The MOB community was highly diverse but dominated by Type Ia MOB, with novel pmoA sequences present. Type II MOB were detected mainly in deeper soil with lower nutrient and higher CH(4) concentrations. Substantial differences in MOB community structure were observed between one high- and one low-activity location. MOB abundance was highly variable across the site [4.0 × 10(4) to 1.1 × 10(7) (g soil dry weight)(-1)]. Potential CH(4) oxidation rates were high [1.8-58.2 mmol CH(4) (L soil air)(-1) day(-1) ] but showed significant lateral variation and were positively correlated with mean CH(4) concentrations (P < 0.01), MOB abundance (P < 0.05) and MOB diversity (weak correlation, P < 0.17). Our findings indicate that Methylosarcina and closely related MOB are key players and that MOB abundance and community structure are driving factors in CH(4) oxidation at this landfill. © 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient

DOE PAGES

Trubl, Gareth; Solonenko, Natalie; Chittick, Lauren; ...

2016-05-17

Permafrost stores approximately 50% of global soil carbon (C) in a frozen form; it is thawing rapidly under climate change, and little is known about viral communities in these soils or their roles in C cycling. In permafrost soils, microorganisms contribute significantly to C cycling, and characterizing them has recently been shown to improve prediction of ecosystem function. In other ecosystems, viruses have broad ecosystem and community impacts ranging from host cell mortality and organic matter cycling to horizontal gene transfer and reprogramming of core microbial metabolisms. Here we developed an optimized protocol to extract viruses from three types ofmore » high organic-matter peatland soils across a permafrost thaw gradient (palsa, moss-dominated bog, and sedge-dominated fen). Three separate experiments were used to evaluate the impact of chemical buffers, physical dispersion, storage conditions, and concentration and purification methods on viral yields. The most successful protocol, amended potassium citrate buffer with bead-beating or vortexing and BSA, yielded on average as much as 2-fold more virus-like particles (VLPs) g –1of soil than other methods tested. All method combinations yielded VLPs g –1of soil on the 10 8order of magnitude across all three soil types. The different storage and concentration methods did not yield significantly more VLPs g –1of soil among the soil types. In conclusion, this research provides much-needed guidelines for resuspending viruses from soils, specifically carbon-rich soils, paving the way for incorporating viruses into soil ecology studies.« less

Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Trubl, Gareth; Solonenko, Natalie; Chittick, Lauren

Permafrost stores approximately 50% of global soil carbon (C) in a frozen form; it is thawing rapidly under climate change, and little is known about viral communities in these soils or their roles in C cycling. In permafrost soils, microorganisms contribute significantly to C cycling, and characterizing them has recently been shown to improve prediction of ecosystem function. In other ecosystems, viruses have broad ecosystem and community impacts ranging from host cell mortality and organic matter cycling to horizontal gene transfer and reprogramming of core microbial metabolisms. Here we developed an optimized protocol to extract viruses from three types ofmore » high organic-matter peatland soils across a permafrost thaw gradient (palsa, moss-dominated bog, and sedge-dominated fen). Three separate experiments were used to evaluate the impact of chemical buffers, physical dispersion, storage conditions, and concentration and purification methods on viral yields. The most successful protocol, amended potassium citrate buffer with bead-beating or vortexing and BSA, yielded on average as much as 2-fold more virus-like particles (VLPs) g –1of soil than other methods tested. All method combinations yielded VLPs g –1of soil on the 10 8order of magnitude across all three soil types. The different storage and concentration methods did not yield significantly more VLPs g –1of soil among the soil types. In conclusion, this research provides much-needed guidelines for resuspending viruses from soils, specifically carbon-rich soils, paving the way for incorporating viruses into soil ecology studies.« less

Compressibility characteristics of Sabak Bernam Marine Clay

NASA Astrophysics Data System (ADS)

Lat, D. C.; Ali, N.; Jais, I. B. M.; Baharom, B.; Yunus, N. Z. M.; Salleh, S. M.; Azmi, N. A. C.

2018-04-01

This study is carried out to determine the geotechnical properties and compressibility characteristics of marine clay collected at Sabak Bernam. The compressibility characteristics of this soil are determined from 1-D consolidation test and verified by existing correlations by other researchers. No literature has been found on the compressibility characteristics of Sabak Bernam Marine Clay. It is important to carry out this study since this type of marine clay covers large coastal area of west coast Malaysia. This type of marine clay was found on the main road connecting Klang to Perak and the road keeps experiencing undulation and uneven settlement which jeopardise the safety of the road users. The soil is indicated in the Generalised Soil Map of Peninsular Malaysia as a CLAY with alluvial soil on recent marine and riverine alluvium. Based on the British Standard Soil Classification and Plasticity Chart, the soil is classified as a CLAY with very high plasticity (CV). Results from laboratory test on physical properties and compressibility parameters show that Sabak Bernam Marine Clay (SBMC) is highly compressible, has low permeability and poor drainage characteristics. The compressibility parameters obtained for SBMC is in a good agreement with other researchers in the same field.

Effect of catchment land use and soil type on the concentration, quality, and bacterial degradation of riverine dissolved organic matter.

PubMed

Autio, Iida; Soinne, Helena; Helin, Janne; Asmala, Eero; Hoikkala, Laura

2016-04-01

We studied the effects of catchment characteristics (soil type and land use) on the concentration and quality of dissolved organic matter (DOM) in river water and on the bacterial degradation of terrestrial DOM. The share of organic soil was the strongest predictor of high concentrations of dissolved organic carbon, nitrogen, and phosphorus (DOC, DON, and DOP, respectively), and was linked to DOM quality. Soil type was more important than land use in determining the concentration and quality of riverine DOM. On average, 5-9 % of the DOC and 45 % of the DON were degraded by the bacterial communities within 2-3 months. Simultaneously, the proportion of humic-like compounds in the DOM pool increased. Bioavailable DON accounted for approximately one-third of the total bioavailable dissolved nitrogen, and thus, terrestrial DON can markedly contribute to the coastal plankton dynamics and support the heterotrophic food web.

Species diversity and drivers of arbuscular mycorrhizal fungal communities in a semi-arid mountain in China

PubMed Central

Zhang, Zhiming; Yang, Jiantao; Zhu, Yiwei

2017-01-01

Arbuscular mycorrhizal fungi (AMF) play an essential role in complex ecosystems. However, the species diversity and composition of AMF communities remain unclear in semi-arid mountains. Further, it is not well understood if the characteristics of AMF community assemblies differ for different habitat types, e.g., agricultural arable land, artificial forest land, natural grassland, and bush/wood land. Here, using the high-throughput technology by Illumina sequencing on the MiSeq platform, we explored the species diversity and composition of soil AMF communities among different habitat types in a semi-arid mountain (Taihang Mountain, Mid-western region of China). Then, we analyzed the effect of nutrient composition and soil texture on AMF community assembly. Our results showed that members of the Glomus genera were predominated in all soil types. The distance-based redundancy analysis indicated that the content of water, available phosphorus, and available potassium were the most crucial geochemical factors that significantly affected AMF communities (p < 0.05). The analysis of the soil texture confirmed that AMF diversity was negatively correlated with soil clay content. The comparison of AMF diversity among the various habitat types revealed that the artificial forest land had the lowest AMF diversity in comparison with other land types. Our findings suggest that there were differences in species diversity and composition of soil AMF communities among different habitat types. These findings shed new light on the characteristics of community structure and drivers of community assembly in AMF in semi-arid mountains, and point to the potential importance of different habitat types on AMF communities. PMID:29230378

Searching for plant root traits to improve soil cohesion and resist soil erosion

NASA Astrophysics Data System (ADS)

De Baets, Sarah; Smyth, Kevin; Denbigh, Tom; Weldon, Laura; Higgins, Ben; Matyjaszkiewicz, Antoni; Meersmans, Jeroen; Chenchiah, Isaac; Liverpool, Tannie; Quine, Tim; Grierson, Claire

2017-04-01

Soil erosion poses a serious threat to future food and environmental security. Soil erosion protection measures are therefore of great importance for soil conservation and food security. Plant roots have proven to be very effective in stabilizing the soil and protecting the soil against erosion. However, no clear insights are yet obtained into the root traits that are responsible for root-soil cohesion. This is important in order to better select the best species for soil protection. Research using Arabidopsis mutants has made great progress towards explaining how root systems are generated by growth, branching, and responses to gravity, producing mutants that affect root traits. In this study, the performance of selected Arabidopsis mutants is analyzed in three root-soil cohesion assays. Measurements of detachment, uprooting force and soil detachment are here combined with the microscopic analysis of root properties, such as the presence, length and density of root hairs in this case. We found that Arabidopsis seedlings with root hairs (wild type, wer myb23, rsl4) were more difficult to detach from gel media than hairless (cpc try) or short haired (rsl4, rhd2) roots. Hairy roots (wild type, wer myb23) on mature, non-reproductive rosettes were more difficult to uproot from compost or clay soil than hairless roots (cpc try). At high root densities, erosion rates from soils with hairless roots (cpc try) were as much as 10 times those seen from soils occupied by roots with hairs (wer myb23, wild type). We find therefore root hairs play a significant role in root-soil cohesion and in minimizing erosion. This framework and associated suite of experimental assays demonstrates its ability to measure the effect of any root phenotype on the effectiveness of plant roots in binding substrates and reducing erosion.

Distribution and Degradation State of Soil Organic Carbon Stocks in Ice Wedge Polygons of the Arctic Coastal Plain, Alaska

NASA Astrophysics Data System (ADS)

Jastrow, J. D.; Ping, C. L.; Deck, C. B.; Matamala, R.; Vugteveen, T. W.; Lederhouse, J. S.; Michaelson, G. J.

2016-12-01

Estimates of the amount of organic carbon (C) stored in permafrost-region soils and its susceptibility to mobilization with changing climate are improving but remain high, affecting the ability to reliably predict regional C-climate feedbacks. In lowland permafrost soils, much of the organic matter exists in a poorly degraded state and is often weakly associated with soil minerals due to the cold, wet environment and cryoturbation. Thus, the impacts of warming and permafrost thaw likely will depend, at least initially, on the past history of soil organic matter (SOM) degradation. Ice wedge polygons are ubiquitous, patterned ground features throughout Arctic coastal plain regions and are large enough (5-30 m across) that a better three-dimensional understanding of their C stocks and relative degradation state could improve geospatial upscaling of observational data and contribute benchmarks for constraining model parameters. We investigated the distribution and existing degradation state of SOM to a depth of 2 meters across three polygon types on the Arctic Coastal Plain of Alaska: flat-centered (FCP), low-centered (LCP), and high-centered (HCP) polygons, with each type replicated 3 times. To assess the relative degradation state of SOM, we used particle size fractionation to isolate fibric (coarse) from more degraded (fine) particulate organic matter and separated mineral-associated organic matter into silt- and clay-sized fractions. We found variations in the thickness and quality of surface organic layers for different polygon types. Below the active layer, organic-rich cryoturbated layers were located in the transition zone and fingered down into the upper permafrost. Soil organic C stocks varied across individual polygons and differed among polygon types, with HCPs generally having the largest C stocks. The relative degradation state of SOM also varied spatially and vertically within polygons and differed among polygon types. Our findings suggest that accounting for polygon-scale (wedge to center to wedge) and landscape-scale (polygon type) variations could help reduce the uncertainties in observational estimates of soil C stocks and their degradation state for areas dominated by ice wedge polygons.

[Effects of Different Altitudes on Soil Microbial PLFA and Enzyme Activity in Two Kinds of Forests].

PubMed

Zeng, Qing-ping; He, Bing-hui; Mao, Qiao-zhi; Wu, Yao-peng; Huang, Qi; Li, Yuan

2015-12-01

The soil microbial community is an important part in soil ecosystem, and it is sensitive to the ecological environment. Phospholipid-derived fatty acids ( PLFA ) analysis was used to examine variations in soil microbial community diversity and its influencing factors. The results showed that: there existed 48 PLFAs that were significant in the soil samples from six altitudes. The PLFAs of six altitudes with the highest contents were i16:0, 10Me17:0, 10Me18:0 TBSA. The citrus forest exhibited richer soil PLFAs distribution both in type and amount than those in masson pine. The microbial activity and functional diversity of masson pine were increased with increasing altitudes, and citrus forest gradually decreased, the PLFA content of different microbial groups in each altitude were significantly different. The richness index, Shannon-Wiener index and Pielou evenness index of masson pine in low elevation were holistically higher than those in high elevation. However, the highest richness index of citrus forest was in low altitude, the highest Shannon-Wiener index and Pielou evenness index were in high altitude. The PLFAs content of different microbial groups were closely correlated to the soil enzyme activities and environmental factors. The PLFAs of bacteria, actinomycetes, G⁻ (Gram- positive), G⁺ (Gram-negative) were positively correlated with Ure(urease) , Ive(invertase) , CAT( catalase activity) and forest type, the PLFAs of fungi was significantly correlated with Ure, Ive, CAT, the PLFAs of bacteria, fungi, actinomycetes, G⁻ , G⁺ were significantly negatively or less correlated with elevation. Ure, Ive, CAT, forest type and elevation are the pivotal factors controlling the soil microbial biomass and activities.

Land-use changes influence soil bacterial communities in a meadow grassland in Northeast China

NASA Astrophysics Data System (ADS)

Cao, Chengyou; Zhang, Ying; Qian, Wei; Liang, Caiping; Wang, Congmin; Tao, Shuang

2017-10-01

The conversion of natural grassland into agricultural fields is an intensive anthropogenic perturbation commonly occurring in semiarid regions, and this perturbation strongly affects soil microbiota. In this study, the influences of land-use conversion on the soil properties and bacterial communities in the Horqin Grasslands in Northeast China were assessed. This study aimed to investigate (1) how the abundances of soil bacteria changed across land-use types, (2) how the structure of the soil bacterial community was altered in each land-use type, and (3) how these variations were correlated with soil physical and chemical properties. Variations in the diversities and compositions of bacterial communities and the relative abundances of dominant taxa were detected in four distinct land-use systems, namely, natural meadow grassland, paddy field, upland field, and poplar plantation, through the high-throughput Illumina MiSeq sequencing technique. The results indicated that land-use changes primarily affected the soil physical and chemical properties and bacterial community structure. Soil properties, namely, organic matter, pH, total N, total P, available N and P, and microbial biomass C, N, and P, influenced the bacterial community structure. The dominant phyla and genera were almost the same among the land-use types, but their relative abundances were significantly different. The effects of land-use changes on the structure of soil bacterial communities were more quantitative than qualitative.

Modelling Soil Erosion in the Densu River Basin Using RUSLE and GIS Tools.

PubMed

Ashiagbori, G; Forkuo, E K; Laari, P; Aabeyir, R

2014-07-01

Soil erosion involves detachment and transport of soil particles from top soil layers, degrading soil quality and reducing the productivity of affected lands. Soil eroded from the upland catchment causes depletion of fertile agricultural land and the resulting sediment deposited at the river networks creates river morphological change and reservoir sedimentation problems. However, land managers and policy makers are more interested in the spatial distribution of soil erosion risk than in absolute values of soil erosion loss. The aim of this paper is to model the spatial distribution of soil erosion in Densu River Basin of Ghana using RUSLE and GIS tools and to use the model to explore the relationship between erosion susceptibility, slope and land use/land cover (LULC) in the Basin. The rainfall map, digital elevation model, soil type map, and land cover map, were input data in the soil erosion model developed. This model was then categorized into four different erosion risk classes. The developed soil erosion map was then overlaid with the slope and LULC maps of the study area to explore their effects on erosion susceptibility of the soil in the Densu River Basin. The Model, predicted 88% of the basin as low erosion risk and 6% as moderate erosion risk, 3% as high erosion risk and 3% as severe risk. The high and severe erosion areas were distributed mainly within the areas of high slope gradient and also sections of the moderate forest LULC class. Also, the areas within the moderate forest LULC class found to have high erosion risk, had an intersecting high erodibility soil group.

Discrimination of soil hydraulic properties by combined thermal infrared and microwave remote sensing

NASA Technical Reports Server (NTRS)

Vandegriend, A. A.; Oneill, P. E.

1986-01-01

Using the De Vries models for thermal conductivity and heat capacity, thermal inertia was determined as a function of soil moisture for 12 classes of soil types ranging from sand to clay. A coupled heat and moisture balance model was used to describe the thermal behavior of the top soil, while microwave remote sensing was used to estimate the soil moisture content of the same top soil. Soil hydraulic parameters are found to be very highly correlated with the combination of soil moisture content and thermal inertia at the same moisture content. Therefore, a remotely sensed estimate of the thermal behavior of the soil from diurnal soil temperature observations and an independent remotely sensed estimate of soil moisture content gives the possibility of estimating soil hydraulic properties by remote sensing.

Soil characteristics and plant exotic species invasions in the Grand Staircase-Escalante National Monument, Utah, USA

USGS Publications Warehouse

Bashkin, Michael A.; Stohlgren, Thomas J.; Otsuki, Yuka; Lee, Michelle; Evangelista, Paul H; Belnap, Jayne

2003-01-01

The Grand Staircase - Escalante National Monument (GSENM) contains a rich diversity of native plant communities. However, many exotic plant species have become established, potentially threatening native plant diversity. We sought to quantify patterns of native and exotic plant species and cryptobiotic crusts (mats of lichens, algae, and mosses on the soil surface), and to examine soil characteristics that may indicate or predict exotic species establishment and success. We established 97 modified-Whittaker vegetation plots in 11 vegetation types over a 29,000 ha area in the Monument. Canonical correspondence analysis (CCA) and multiple linear regressions were used to quantify relationships between soil characteristics and associated native and exotic plant species richness and cover. CCA showed that exotic species richness was significantly (P<0.05) associated with soil P (r=0.84), percentage bare ground (r=0.71), and elevation (r=0.67). Soil characteristics alone were able to predict 41 and 46% of the variation in exotic species richness and cover, respectively. In general, exotic species invasions tend to occur in fertile soils relatively high in C, N and P. These areas are represented by rare mesic high-elevation habitats that are rich in native plant diversity. This suggests that management should focus on the protection of the rare but important vegetation types with fertile soils.

Soils of the Southwestern Part of the Pacific Coast of Russia

NASA Astrophysics Data System (ADS)

Kostenkov, N. M.; Zharikova, E. A.

2018-02-01

The diversity of soils in the southwestern part of the Pacific coast of Russia (Primorie region) is discussed. Overall, 17 soil types belonging to 8 soil orders have been described in this region, and their morphology and properties have been studied. The diversity of plant communities, geomorphic conditions, and parent materials and relatively mild (as compared with other parts of the Far East region of Russia) specify the great variability of soil cover patterns. Low sea terraces are occupied by various peat, organo-accumulative, and gley soils; poorly drained medium-high terraces are the areas of various dark-humus and darkhumus gleyed soils. Typical and gleyic dark-humus podbels, dark-humus, and dark-humus gleyed soils formed on the high sea terraces. Residual elevations are occupied by brown forest (burozemic) soils, including typical burozems, dark-humus burozems, and gleyic dark-humus burozems and by dark-humus podbels. Various alluvial, gleyic gray-humus, and mucky gley soils are developed on riverine plains. On general, darkhumus soils with the high (>10%) humus content predominate; the area of dark-humus podbels us estimated at about 20%, and the area of dark-humus burozems is about 12%. All the soils in this region are specified by increased acidity values. The exchangeable sodium content is often high in the upper soil horizons with maximum values (0.71-1.19 cmol(c)/kg) in the peat gleyzems, peaty dark-humus soils, mucky-gley soils, and eutrophic peat soils of sea terraces. The grouping of the soils with respect to their physicochemical and agrochemical properties is suggested.

Soil erosion in a man-made landscape: the Mediterranean

NASA Astrophysics Data System (ADS)

Cerdà, A.; Ruiz Sinoga, J. D.; Cammeraat, L. H.

2012-04-01

Mediterranean-type ecosystems are characterised by a seasonally contrasted distribution of precipitation, by the coincidence of the driest and hottest season in summer, by an often-mountainous terrain, and by a long history of intense human occupation, especially around the Mediterranean Sea. The history of the Mediterranean lands is the history of human impacts on the soil system, and soil erosion is the most intense and widespread impact on this land where high intensity and uneven rainfall is found. A review of the soil erosion rates measured in the Mediterranean basin will be shown. The measurements done by means of erosion pins, topographical measurements, rainfall simulators, Gerlach collectors in open or close plots, watershed/basin measurements, reservoirs siltation and historical data will be shown. A review of the soil erosion models applied in the Mediterranean will be shown. The tentative approach done until October 2011 show that the soil erosion rates on Mediterranean type ecosystems are not as high as was supposed by the pioneers in the 70's. And this is probably due to the fact that the soils are very shallow and sediments are not available after millennia of high erosion rates. This is related to the large amount of rock fragments are covering the soil, and the rock outcrops that are found in the upper slope trams and the summits. Soil erosion in the Mediterranean is seasonal due to the rainfall concentration in winter, and highly variable within years as the high intensity rainfall events control the sediment production. Natural vegetation is adapted to the Mediterranean environmental conditions, and they are efficient to control the soil losses. An example are the forest fire that increase the soil losses but this is a temporal change as after 2-4 years the soil erosion rates are similar to the pre-fire period. Agriculture lands are the source of sediments although the highest erosion rates are found in badland areas that cover a small part of the Mediterranean lands. The methods applied to measure or estimate the soil erosion should be improved to make them comparable. An agreement is necessary to decide the size of the plots, the material and equipment to be used and the future research topics. This research study is being supported by the the research project CGL2008-02879/BTE

Magnetic properties of alluvial soils polluted with heavy metals

NASA Astrophysics Data System (ADS)

Dlouha, S.; Petrovsky, E.; Boruvka, L.; Kapicka, A.; Grison, H.

2012-04-01

Magnetic properties of soils, reflecting mineralogy, concentration and grain-size distribution of Fe-oxides, proved to be useful tool in assessing the soil properties in terms of various environmental conditions. Measurement of soil magnetic properties presents a convenient method to investigate the natural environmental changes in soils as well as the anthropogenic pollution of soils with several risk elements. The effect of fluvial pollution with Cd, Cu, Pb and Zn on magnetic soil properties was studied on highly contaminated alluvial soils from the mining/smelting district (Příbram; CZ) using a combination of magnetic and geochemical methods. The basic soil characteristics, the content of heavy metals, oxalate, and dithionite extractable iron were determined in selected soil samples. Soil profiles were sampled using HUMAX soil corer and the magnetic susceptibility was measured in situ, further detailed magnetic analyses of selected distinct layers were carried out. Two types of variations of magnetic properties in soil profiles were observed corresponding to indentified soil types (Fluvisols, and Gleyic Fluvisols). Significantly higher values of topsoil magnetic susceptibility compared to underlying soil are accompanied with high concentration of heavy metals. Sequential extraction analysis proved the binding of Pb, Zn and Cd in Fe and Mn oxides. Concentration and size-dependent parameters (anhysteretic and isothermal magnetization) were measured on bulk samples in terms of assessing the origin of magnetic components. The results enabled to distinguish clearly topsoil layers enhanced with heavy metals from subsoil samples. The dominance of particles with pseudo-single domain behavior in topsoil and paramagnetic/antiferromagnetic contribution in subsoil were observed. These measurements were verified with room temperature hysteresis measurement carried out on bulk samples and magnetic extracts. Thermomagnetic analysis of magnetic susceptibility measured on magnetic extracts indicated the presence of magnetite/maghemite in the uppermost layers, and strong mineralogical transformation of iron oxyhydroxides during heating. Magnetic techniques give valuable information about the soil Fe oxides, which are useful for investigation of the environmental effects in soil. Key words: magnetic methods, Fe oxides, pollution, alluvial soils.

Automated general temperature correction method for dielectric soil moisture sensors

NASA Astrophysics Data System (ADS)

Kapilaratne, R. G. C. Jeewantinie; Lu, Minjiao

2017-08-01

An effective temperature correction method for dielectric sensors is important to ensure the accuracy of soil water content (SWC) measurements of local to regional-scale soil moisture monitoring networks. These networks are extensively using highly temperature sensitive dielectric sensors due to their low cost, ease of use and less power consumption. Yet there is no general temperature correction method for dielectric sensors, instead sensor or site dependent correction algorithms are employed. Such methods become ineffective at soil moisture monitoring networks with different sensor setups and those that cover diverse climatic conditions and soil types. This study attempted to develop a general temperature correction method for dielectric sensors which can be commonly used regardless of the differences in sensor type, climatic conditions and soil type without rainfall data. In this work an automated general temperature correction method was developed by adopting previously developed temperature correction algorithms using time domain reflectometry (TDR) measurements to ThetaProbe ML2X, Stevens Hydra probe II and Decagon Devices EC-TM sensor measurements. The rainy day effects removal procedure from SWC data was automated by incorporating a statistical inference technique with temperature correction algorithms. The temperature correction method was evaluated using 34 stations from the International Soil Moisture Monitoring Network and another nine stations from a local soil moisture monitoring network in Mongolia. Soil moisture monitoring networks used in this study cover four major climates and six major soil types. Results indicated that the automated temperature correction algorithms developed in this study can eliminate temperature effects from dielectric sensor measurements successfully even without on-site rainfall data. Furthermore, it has been found that actual daily average of SWC has been changed due to temperature effects of dielectric sensors with a significant error factor comparable to ±1% manufacturer's accuracy.

Effect of soil type and soil management on soil physical, chemical and biological properties in commercial organic olive orchards in Southern Spain

NASA Astrophysics Data System (ADS)

Gomez, Jose Alfonso; Auxiliadora Soriano, Maria; Montes-Borrego, Miguel; Navas, Juan Antonio; Landa, Blanca B.

2014-05-01

One of the objectives of organic agriculture is to maintain and improve soil quality, while simultaneously producing an adequate yield. A key element in organic olive production is soil management, which properly implemented can optimize the use of rainfall water enhancing infiltration rates and controlling competition for soil water by weeds. There are different soil management strategies: eg. weed mowing (M), green manure with surface tillage in spring (T), or combination with animal grazing among the trees (G). That variability in soil management combined with the large variability in soil types on which organic olive trees are grown in Southern Spain, difficult the evaluation of the impact of different soil management on soil properties, and yield as well as its interpretation in terms of improvement of soil quality. This communications presents the results and analysis of soil physical, chemical and biological properties on 58 soils in Southern Spain during 2005 and 2006, and analyzed and evaluated in different studies since them. Those 58 soils were sampled in 46 certified commercial organic olive orchards with four soil types as well as 12 undisturbed areas with natural vegetation near the olive orchards. The four soil types considered were Eutric Regosol (RGeu, n= 16), Eutric Cambisol (CMeu, n=16), Calcaric Regosol (RGca, n=13 soils sampled) and Calcic Cambisol (CMcc), and the soil management systems (SMS) include were 10 light tillage (LT), 16 sheep grazing (G), 10 tillage (T), 10 mechanical mowing (M), and 12 undisturbed areas covered by natural vegetation (NV-C and NV-S). Our results indicate that soil management had a significant effect on olive yield as well as on key soil properties. Among these soil properties are physical ones, such as infiltration rate or bulk density, chemical ones, especially organic carbon concentration, and biological ones such as soil microbial respiration and bacterial community composition. Superimpose to that soil management induced variability, there was a strong interaction with soil type and climate conditions. There was also a relatively high variability within the same soil management and soil type class, indicating farm to farm variability in conditions and history of soil management. Based on this dataset two different approaches were taken to: A) evaluate the risk of soil degradation based on a limited set of soil properties, B) assess the effect of changes in SMS on soil biodiversity by using terminal restriction profiles (TRFs) derived from T-RFLP analysis of amplified 16S rDNA as. The results indicates the potential of both approaches to assess the risk of soil degradation (A) and the impact on soil biodiversity (B) upon appropriate benchmarking to characterize the interaction between soil management and soil type References Álvarez, S., Soriano, M.A., Landa, B.B., and Gómez, J.A. 2007. Soil properties in organic olive orchards compared with that in natural areas in a mountainous landscape in southern Spain. Soil Use Manage 23:404-416. Gómez, J.A., Álvarez, S., and Soriano, M.A. 2009. Development of a soil degradation assessment tool for organic olive groves in southern Spain. Catena 79:9-17. Landa, B.B., Montes-Borrego, M., Aranda, S., Soriano, M.A., Gómez, J.A., and Navas-Cortés, J.A. 2013. Soil factors involved in the diversity and structure of soil bacterial communities in commercial organic olive orchards in Southern Spain. Environmental Microbiology Reports (accepted) Soriano, M.A., Álvarez, S., Landa, B.B., and Gómez, J.A. 2013. Soil properties in organic olive orchards following different weed management in a rolling landscape of Andalusia, Spain. Renew Agr Food Syst (in press), doi:10.1017/S1742170512000361.

Nitrous oxide production from soils amended with biogas residues and cattle slurry.

PubMed

Abubaker, J; Odlare, M; Pell, M

2013-07-01

The amount of residues generated from biogas production has increased dramatically due to the worldwide interest in renewable energy. A common way to handle the residues is to use them as fertilizers in crop production. Application of biogas residues to agricultural soils may be accompanied with environmental risks, such as increased NO emission. In 24-d laboratory experiments, NO dynamics and total production were studied in arable soils (sandy, clay, and organic) amended with one of two types of anaerobically digested biogas residues (BR-A and BR-B) generated from urban and agricultural waste and nondigested cattle slurry (CS) applied at rates corresponding to 70 kg NH-N ha. Total NO-N losses from the sandy soil were higher after amendment with BR-B (0.32 g NO-N m) than BR-A or CS (0.02 and 0.18 g NO-N m, respectively). In the clay soil, NO-N losses were very low for CS (0.02 g NO-N m) but higher for BR-A and BR-B (0.25 and 0.15 g NO-N m, respectively). In the organic soil, CS gave higher total NO-N losses (0.31 g NO-N m) than BR-A or BR-B (0.09 and 0.08 g NO-N m, respectively). Emission peaks differed considerably between soils, occurring on Day 1 in the organic soil and on Days 11 to 15 in the sand, whereas in the clay the peak varied markedly (Days 1, 6, and 13) depending on residue type. In all treatments, NH concentration decreased with time, and NO concentration increased. Potential ammonium oxidation and potential denitrification activity increased significantly in the amended sandy soil but not in the organic soil and only in the clay amended with CS. The results showed that fertilization with BR can increase NO emissions and that the size is dependent on the total N and organic C content of the slurry and on soil type. In conclusion, the two types of BR and the CS are not interchangeable regarding their effects on NO production in different soils, and, hence, matching fertilizer type to soil type could reduce NO emissions. For instance, it could be advisable to avoid fertilization of organic soils with CS containing high amounts or organic C and instead use BR. In clay soil, however, the risk of NO emissions could be lowered by choosing a CS. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Polycyclic Aromatic Hydrocarbons Content in Contaminated Forest Soils with Different Humus Types.

PubMed

Lasota, Jarosław; Błońska, Ewa

2018-01-01

The aim of the study was to determine polycyclic aromatic hydrocarbon (PAH) content in different forest humus types. The investigation was carried out in Chrzanów Forest District in southern Poland. Twenty research plots with different humus types (mor and mull) were selected. The samples for analysis were taken after litter horizons removing from a depth of 0-10 cm (from the Of- and Oh-horizon total or A-horizon). pH, organic carbon and total nitrogen content, base cations, acidity, and heavy metal content were determined. In the natural moisture state, the activity of dehydrogenase was determined. The study included the determination of PAH content. The conducted research confirms strong contamination of study soil by PAHs and heavy metals. Our experiment provided evidence that different forest humus types accumulate different PAH amounts. The highest content of PAHs and heavy metals was recorded in mor humus type. The content of PAHs in forest humus horizon depends on the content and quality of soil organic matter. Weaker degradation of hydrocarbons is associated with lower biological activity of soils. The mull humus type showed lower content of PAHs and at the same time the highest biological activity confirmed by high dehydrogenase activity.

Spatial disaggregation of complex soil map units at regional scale based on soil-landscape relationships

NASA Astrophysics Data System (ADS)

Vincent, Sébastien; Lemercier, Blandine; Berthier, Lionel; Walter, Christian

2015-04-01

Accurate soil information over large extent is essential to manage agronomical and environmental issues. Where it exists, information on soil is often sparse or available at coarser resolution than required. Typically, the spatial distribution of soil at regional scale is represented as a set of polygons defining soil map units (SMU), each one describing several soil types not spatially delineated, and a semantic database describing these objects. Delineation of soil types within SMU, ie spatial disaggregation of SMU allows improved soil information's accuracy using legacy data. The aim of this study was to predict soil types by spatial disaggregation of SMU through a decision tree approach, considering expert knowledge on soil-landscape relationships embedded in soil databases. The DSMART (Disaggregation and Harmonization of Soil Map Units Through resampled Classification Trees) algorithm developed by Odgers et al. (2014) was used. It requires soil information, environmental covariates, and calibration samples, to build then extrapolate decision trees. To assign a soil type to a particular spatial position, a weighed random allocation approach is applied: each soil type in the SMU is weighted according to its assumed proportion of occurrence in the SMU. Thus soil-landscape relationships are not considered in the current version of DSMART. Expert rules on soil distribution considering the relief, parent material and wetlands location were proposed to drive the procedure of allocation of soil type to sampled positions, in order to integrate the soil-landscape relationships. Semantic information about spatial organization of soil types within SMU and exhaustive landscape descriptors were used. In the eastern part of Brittany (NW France), 171 soil types were described; their relative area in the SMU were estimated, geomorphological and geological contexts were recorded. The model predicted 144 soil types. An external validation was performed by comparing predicted with effectively observed soil types derived from available soil maps at scale of 1:25.000 or 1:50.000. Overall accuracies were 63.1% and 36.2%, respectively considering or not the adjacent pixels. The introduction of expert rules based on soil-landscape relationships to allocate soil types to calibration samples enhanced dramatically the results in comparison with a simple weighted random allocation procedure. It also enabled the production of a comprehensive soil map, retrieving expected spatial organization of soils. Estimation of soil properties for various depths is planned using disaggregated soil types, according to the GlobalSoilmap.net specifications. Odgers, N.P., Sun, W., McBratney, A.B., Minasny, B., Clifford, D., 2014. Disaggregating and harmonising soil map units through resampled classification trees. Geoderma 214, 91-100.

Thermal volatilization (TV) of different hyperarid Mars like-soils from the Atacama Desert: Implications for the analysis of the Phoenix Mission

NASA Astrophysics Data System (ADS)

Valdivia-Silva, J. E.; Navarro-Gonzalez, R.; McKay, C. P.

2008-09-01

The Phoenix spacecraft will search for organics in the soil and ice in the Martian north polar regions using thermal volatilization (TV) followed by mass spectrometry (MS). This experiment is a combination of a high-temperature furnace and a mass spectrometer that will be use to analyze samples delivered to instrument via a robotic arm. The samples will be heated from ambient to 1000ºC while evolved gases, including organic molecules and fragments, if they are present, will be simultaneously measured by a magnetic sector mass spectrometer (1). Our laboratory has developed a sample characterization method using a pyrolizer integrated to a quadrupole mass spectrometer to support the interpretations of TV data. The Atacama Desert, on northern Chile and southern Peru, has been considered the most arid region over the world (2) and an excellent Mars-like soil analogous (3). These soils contain very low levels to organic matter (10-40 ppm of organic C), and exotic mineralogical composition including iron oxides, which are common characteristics expected on Mars. A previous paper that examined the release of organics from samples soils by flash TV (pyrolisis) coupled to GC-MS (4). This work showed low efficiency of flash TV in soils with low organics or high contents of iron minerals. In addition, other study of agricultural soils showed low correlation between organics concentration and TV response, when levels of total organic matter were below 50000 ppm C or high presence of iron oxides (5). However, the efficiency of gradual heating by TV analysis from hyperarid soils has not been investigated. Here we examine the thermal and evolved gas properties of six types of soils from the two hyperarid core regions from the Atacama Desert: Yungay (northern Chile) and Pampas de La Joya (southern Peru), in order to investigate the effect of soil matrix and low organics contents over TV response. Between 20 to 40 mg of soil was loaded in a capillary quartz tube and it was mounted in the center of platinum coil filament pyrolizer probe. Then sample into de quartz tube was subjected to a thermal treatment from 30°C to 1200°C with a heating rate of 20°C/min. The resulting volatiles evolved from the sample were carried away by helium and transferred into a HP quadrupole mass spectrometer operating in electron ionization mode at 70 eV with a resolution of 1m/z. The mass analyzer was scanned from 10 to 200 m/z at a rate 5.3 scans per second. The nominal sensitivity of the mass analyzer is 0.02 ppb of hexachlorobenzene. Blanks were prepared with no soil added. As expected, there were significant differences in the evolved gas behaviors between soils samples depending of the soil matrix under similar heating conditions. First, the samples belonging to the most arid environments (PE001, PE389) had significant differences compared with less arid soils (PE378, PE386). Carbon in hyperarid soils, in the form of CO2 (ion 44 m/z) began its release to 330±30°C, while the less arid soils to 245±45°C. Volatile ions released from soils during TV-MS analysis were analyzed searching organics fragments. Soil type VI (PE-001), which contains ~11.4 ppm organic C, showed the release of the following mass fragments: 18, 44, 48, 64, and 66. Sources for the release of CO2 in TV analysis of soils comes to oxidation of organic matter (<600ºC), and thermal decomposition of carbonates (>600ºC). Mass 18 originates from water releasing in the course of dehydration processes that is bound in soil minerals, and from oxidation of organics in different temperatures depending the mineral fraction in the soil. The masses 48, 64, and 66 have similar thermal properties, beginning to be released at ~370°C and continue to rise up to 1200°C. These masses are due to the decomposition of sulfates into SO+, SO2 +, and S34O2 +. Mass 66 is detected only if the abundance of mass 64 is very high. TV traces from soils type V (PE-276), type I (PE-361), and type II (PE-388), which contain low organics concentrations (3-23 ppm of organic C), presented similar ions released to soil type VI, but with some variations at times of peak start or maximum release. The TV-MS trace for soil type IV (PE-287) showed the release of the following ions: 16, 18, 36, 44, 48, and 64. In this soil, the mass 44 showed the highest value at >760°C, probably by thermal decomposition of carbonates at higher temperatures; however at 700ºC, CO2 could result from the decomposition oxidation of refractory organics that have been detected by pyrolisis-GC-MS at 750ºC (4). In contrast, the TV-MS trace for sample soil type III (PE-386), which contains 35 ppm of organic C, showed the release of the following major mass fragments (m/z): 18, 30, 36, 44, 48 and 64 (Figure 1). EPSC Abstracts, Vol. 3, EPSC2008-A-00490, 2008 European Planetary Science Congress, Author(s) 2008 Probably, the mass 30 is due to NO that evolves from the thermal oxidation of N-organics at low temperature or degradation of nitrates at high temperatures. Additionally, ion 36 could be due to thermal degradation to chlorides. Our results show interesting ions released from Marslike soils by TV analysis, however soils that have low levels to organic carbon (3-40 ppm), were not detected by this method. If the concentrations of organics in the soils and ice on Mars at the Phoenix landing site are low than 30 ppm, the experiment could fail. Recently, our laboratory investigated the presence of organics in the samples soils by the release of NO (mass 30) at low temperatures using TV-MS (Research submitted). Hence, Phoenix mission could have an option in the searching for organic matter on Mars. These data indicate the importance of the study of Mars-like soils to prevent similar problems in space research.

[Correlation Among Soil Organic Carbon, Soil Inorganic Carbon and the Environmental Factors in a Typical Oasis in the Southern Edge of the Tarim Basin].

PubMed

Gong, Lu; Zhu, Mei-ling; Liu, Zeng-yuan; Zhang, Xue-ni; Xie, Li-na

2016-04-15

We analyzed the differentiation among the environmental factors and soil organic/inorganic carbon contents of irrigated desert soil, brown desert soil, saline soil and aeolian sandy soil by classical statistics methods, and studied the correlation between soil carbon contents and the environmental factor by redundancy analysis (RDA) in a typical oasis of Yutian in the southern edge of the Tarim Basin. The results showed that the average contents of soil organic carbon and soil inorganic carbon were 2.51 g · kg⁻¹ and 25.63 g · kg⁻¹ respectively. The soil organic carbon content of the irrigated desert soil was significantly higher than those of brown desert soil, saline soil and aeolian sandy soil, while the inorganic carbon content of aeolian sandy soil was significantly higher than those of other soil types. The soil moisture and nutrient content were the highest in the irrigated desert soil and the lowest in the aeolian sandy sail. All soil types had high degree of salinization except the irrigated desert soil. The RDA results showed that the impacts of environmental factors on soil carbon contents ranked in order of importance were total nitrogen > available phosphorus > soil moisture > ground water depth > available potassium > pH > total salt. The soil carbon contents correlated extremely significantly with total nitrogen, available phosphorus, soil moisture and ground water depth (P < 0.01), and it correlated significantly with available potassium and pH (P < 0.05). There was no significant correlation between soil carbon contents and other environmental factors (P > 0.05).

Characterizing Drought Impacted Soils in the San Joaquin Valley of California Using Remote Sensing

NASA Astrophysics Data System (ADS)

Wahab, L. M.; Miller, D.; Roberts, D. A.

2017-12-01

California's San Joaquin Valley is an extremely agriculturally productive region of the country, and understanding the state of soils in this region is an important factor in maintaining this high productivity. In this study, we quantified changing soil cover during the drought and analyzed spatial changes in salinity, organic matter, and moisture using unique soil spectral characteristics. We used data from the Airborne Visible / Infrared Imaging Spectrometer (AVIRIS) from Hyperspectral Infrared Imager (HyspIRI) campaign flights in 2013 and 2014 over the San Joaquin Valley. A mixture model was applied to both images that identified non- photosynthetic vegetation, green vegetation, and soil cover fractions through image endmembers of each of these three classes. We optimized the spectral library used to identify these classes with Iterative Endmember Selection (IES), and the images were unmixed using Multiple Endmember Spectral Mixture Analysis (MESMA). Maps of soil electrical conductivity, organic matter, soil saturated moisture, and field moisture were generated for the San Joaquin Valley based on indices developed by Ben-Dor et al. [2002]. Representative polygons were chosen to quantify changes between years. Maps of spectrally distinct soils were also generated for 2013 and 2014, in order to determine the spatial distribution of these soil types as well as their temporal dynamics between years. We estimated that soil cover increased by 16% from 2013-2014. Six spectrally distinct soil types were identified for the region, and it was determined that the distribution of these soil types was not constant for most areas between 2013 and 2014. Changes in soil pH, electrical conductivity, and soil moisture were strongly tied in the region between 2013 and 2014.

Environment degeneration affects habitat diversity of Tamarix spp. in arid zone

NASA Astrophysics Data System (ADS)

Li, Tiejun; Yang, Weikang

2003-07-01

There are 18 species of Tamarix spp. in China and 16 of them in Xinjiang. As a group of bushes which widespread in salty and sandy land in arid zone, Tamarix spp. had gotten more and more attention by ecologists because of their unique bio-ecological characteristics, ecological and social economy functions. Wide Distribution of Tamarix spp. affects ecological environment stabilization of arid zone in western China. The modern distribution and habitat of Tamarix spp. diversity in Xinjiang were studied in this paper. Result revealed that water (surface water and high groundwater ) is the critical environment factor which determines the modern distribution of Tamarix spp.. Depend on analyzing groundwater lever and salt content of soil(two environment factors), author divided the habitat of Tamarix spp. into six type groups (low salt type with high groundwater, middle salt type with high groundwater, high salt type with high groundwater, low salt type with low groundwater and middle salt type with low groundwater etc.) which consisting of ten habitat types. Habitat of Tamarix spp. in Xinjiang never exists in isolation, but associate with each other. The groundwater lever and salt content of soil varies with the lapse of time, then habitats transform from one type into another and species of Tamarix spp. in habitats transforms accordingly.

Decreasing Nitrogen Fertilizer Input Had Little Effect on Microbial Communities in Three Types of Soils

PubMed Central

Yu, Hailing; Gao, Qiang; Shao, Zeqiang; Ying, Anning; Sun, Yuyang; Liu, Jingwei; Mao, Wei; Zhang, Bin

2016-01-01

In this study, we examined the influence of different nitrogen (N) application rates (0, 168, 240, 270 and 312 kg N ha-1) on soil properties, maize (Zea mays L.) yields and microbial communities of three types of soils (clay, alluvial and sandy soils). Phospholipid fatty acid analysis was used to characterize soil microbial communities. Results indicated that N fertilization significantly decreased microbial biomass in both clay and sandy soils regardless of application rate. These decreases were more likely a result of soil pH decreases induced by N fertilization, especially in the sandy soils. This is supported by structural equation modeling and redundancy analysis results. Nitrogen fertilization also led to significant changes in soil microbial community composition. However, the change differences were gradually dismissed with increase in N application rate. We also observed that N fertilization increased maize yields to the same level regardless of application rate. This suggests that farmers could apply N fertilizers at a lower rate (i.e. 168 kg N ha-1), which could achieve high maize yield on one hand while maintain soil microbial functions on the other hand. PMID:26992097

Influence of Vinasse Application in the Structure and Composition of the Bacterial Community of the Soil under Sugarcane Cultivation

PubMed Central

de Camargo, André Ferreira; Goulart, Karla Cristina Stropa; Lemos, Eliana Gertrudes de Macedo

2016-01-01

Although the use of vinasse as a waste helps replenish soil nutrients and improves the quality of the sugarcane crop, it is known that vinasse residues alter the diversity of bacteria naturally present in the soil. The actual impacts of vinasse application on the selection of bacterial taxa are not understood because no studies have addressed this phenomenon directly. Analysis of 16S rRNA gene clone sequences from four soil types showed that the soil planted with sugarcane and fertilized with vinasse has a high diversity of bacteria compared to other biomes, where Acidobacteria were the second most abundant phylum. Although the composition and structure of bacterial communities differ significantly in the four environments (Libshuff's test), forest soils and soil planted with sugarcane without vinasse fertilizer were similar to each other because they share at least 28 OTUs related to Rhizobiales, which are important agents involved in nitrogen fixation. OTUs belonging to Actinomycetales were detected more often in the soil that had vinasse applied, indicating that these groups are more favored by this type of land management. PMID:27528875

Comparison of soil microbial respiration and carbon turnover under perennial and annual biofuel crops in two agricultural soils

NASA Astrophysics Data System (ADS)

Szymanski, L. M.; Marin-Spiotta, E.; Sanford, G. R.; Jackson, R. D.; Heckman, K. A.

2015-12-01

Bioenergy crops have the potential to provide a low carbon-intensive alternative to fossil fuels. More than a century of agricultural research has shown that conventional cropping systems can reduce soil organic matter (SOM) reservoirs, which cause long-term soil nutrient loss and C release to the atmosphere. In the face of climate change and other human disruptions to biogeochemical cycles, identifying biofuel crops that can maintain or enhance soil resources is desirable for the sustainable production of bioenergy. The objective of our study was to compare the effects of four biofuel crop treatments on SOM dynamics in two agricultural soils: Mollisols at Arlington Agricultural Research Station in Wisconsin and Alfisols at Kellogg Biological Station in Michigan, USA. We used fresh soils collected in 2013 and archived soils from 2008 to measure the effects of five years of crop management. Using a one-year long laboratory soil incubation coupled with a regression model and radiocarbon measurements, we separated soils into three SOM pools and their corresponding C turnover times. We found that the active pool, or biologically available C, was more sensitive to management and is an earlier indicator of changes to soil C dynamics than bulk soil C measurements. There was no effect of treatment on the active pool size at either site; however, the percent C in the active pool decreased, regardless of crop type, in surface soils with high clay content. At depth, the response of the slow pool differed between annual and perennial cropping systems. The distribution of C among SOM fractions varied between the two soil types, with greater C content associated with the active fraction in the coarser textured-soil and greater C content associated with the slow-cycling fraction in the soils with high clay content. These results suggest that the effects of bioenergy crops on soil resources will vary geographically, with implications for the carbon-cost of biocrop production.

Distribution of millipedes (Myriapoda, Diplopoda) along a forest interior - forest edge - grassland habitat complex.

PubMed

Bogyó, Dávid; Magura, Tibor; Nagy, Dávid D; Tóthmérész, Béla

2015-01-01

We studied the distribution of millipedes in a forest interior-forest edge-grassland habitat complex in the Hajdúság Landscape Protection Area (NE Hungary). The habitat types were as follows: (1) lowland oak forest, (2) forest edge with increased ground vegetation and shrub cover, and (3) mesophilous grassland. We collected millipedes by litter and soil sifting. There were overall 30 sifted litter and soil samples: 3 habitat types × 2 replicates × 5 soil and litter samples per habitats. We collected 9 millipede species; the most abundant species was Glomeristetrasticha, which was the most abundant species in the forest edge as well. The most abundant species in the forest interior was Kryphioiulusoccultus, while the most abundant species in the grassland was Megaphyllumunilineatum. Our result showed that the number of millipede species was significantly lower in the grassland than in the forest or in the edge, however there were no significant difference in the number of species between the forest interior and the forest edge. We found significantly the highest number of millipede individuals in the forest edge. There were differences in the composition of the millipede assemblages of the three habitats. The results of the DCCA showed that forest edge and forest interior habitats were clearly separated from the grassland habitats. The forest edge habitat was characterized by high air temperature, high soil moisture, high soil pH, high soil enzyme activity, high shrub cover and low canopy cover. The IndVal and the DCCA methods revealed the following character species of the forest edge habitats: Glomeristetrasticha and Leptoiuluscibdellus. Changes in millipede abundance and composition were highly correlated with the vegetation structure.

Soil respiration characteristics in different land uses and response of soil organic carbon to biochar addition in high-latitude agricultural area.

PubMed

Ouyang, Wei; Geng, Xiaojun; Huang, Wejia; Hao, Fanghua; Zhao, Jinbo

2016-02-01

The farmland tillage practices changed the soil chemical properties, which also impacted the soil respiration (R s ) process and the soil carbon conservation. Originally, the farmland in northeast China had high soil carbon content, which was decreased in the recent decades due to the tillage practices. To better understand the R s dynamics in different land use types and its relationship with soil carbon loss, soil samples at two layers (0-15 and 15-30 cm) were analyzed for organic carbon (OC), total nitrogen (TN), total phosphorus (TP), total carbon (TC), available nitrogen (AN), available phosphorus (AP), soil particle size distribution, as well as the R s rate. The R s rate of the paddy land was 0.22 (at 0-15 cm) and 3.01 (at 15-30 cm) times of the upland. The average concentrations of OC and clay content in cultivated areas were much lower than in non-cultivated areas. The partial least squares analysis suggested that the TC and TN were significantly related to the R s process in cultivated soils. The upland soil was further used to test soil CO2 emission response at different biochar addition levels during 70-days incubation. The measurement in the limited incubation period demonstrated that the addition of biochar improved the soil C content because it had high concentration of pyrogenic C, which was resistant to mineralization. The analysis showed that biochar addition can promote soil OC by mitigating carbon dioxide (CO2) emission. The biochar addition achieved the best performance for the soil carbon conservation in high-latitude agricultural area due to the originally high carbon content.

SUPERCRITICAL FLUID EXTRACTION OF POLYCYCLIC AROMATIC HYDROCARBON MIXTURES FROM CONTAMINATED SOILS

EPA Science Inventory

Highly contaminated (with PAHs) topsoils were extracted with supercritical CO₂ to determine the feasibility and mechanism of supercritical fluid extraction (SFE). Effect of SCF density, temperature, cosolvent type and amount, and of slurrying the soil with water were ...

[Identification of using organic carbon isotopic composition of soil pollution process].

PubMed

Guo, Qing-Jun; Chen, Tong-Bin; Yang, Jun; Strauss, Harald; Lei, Mei; Zhu, Guang-Xu; Li, Yan-Mei; Zhou, Xiao-Yong; Li, Xiao-Yan

2011-10-01

This study has taken advantage of the characteristics of concentration of soil organic matter (SOC) and delta13 C(SOC) values to provide proofs for environment quality assessment and to know more about polluted sources, sizes and processes in Beijing steel company area. delta13C values of SOC is good for tracing sources and documenting shifts in community composition and distribution. Two sections (Beijing steel company area and Yongledian, Tongzhou) which belong to two different soil types collected in Beijing, and organic carbon isotopic composition and total soil organic carbon were analyzed. These results shows that SOC of soil samples from Beijing steel company area are quite high, and even 9.7% at the surface sample, however SOC from unpolluted area (Yongledian area) is lower than those of industrial area. delta13 C(SOC) from soils of Beijing steel company area and Yongledian area respectively vary from -24.8 per thousand to -23.1 per thousand and -26.4 per thousand to -20.5 per thousand, the results are quite different. The results reflect that there are different organic carbon sources in different types' soil: Organic carbon from Beijing steel company area has been mainly affected by coal burning, soil organic carbon concentrations are quite high, and pollution can affect on soils 70 cm deep underground; and soils from Yongledian area, have been not polluted, and organic matter is from natural litter (C3 plants). Although there are different soil organic carbon concentrations and isotope compositions, two soil sections have similar variation trends. This study provides proofs for environment quality assessment and know more about polluted and natural sources, sizes in Beijing.

Soil tension mediates isotope fractionation during soil water evaporation

NASA Astrophysics Data System (ADS)

Gaj, Marcel; McDonnell, Jeffrey

2017-04-01

Isotope tracing of the water cycle is increasing in its use and usefulness. Many new studies are extracting soil waters and relating these to streamflow, groundwater recharge and plant transpiration. Nevertheless, unlike isotope fractionation factors from open water bodies, soil water fractionation factors are poorly understood and until now, only empirically derived. In contrast to open water evaporation where temperature, humidity and vapor pressure gradient define fractionation (as codified in the well-known Craig and Gordon model), soil water evaporation includes additionally, fractionation by matrix effects. There is yet no physical explanation of kinetic and equilibrium fraction from soil water within the soil profile. Here we present a simple laboratory experiment with four admixtures of soil grain size (from sand to silt to clay). Oven-dried samples were spiked with water of known isotopic composition at different soil water contents. Soils were then stored in sealed bags and the headspace filled with dry air and allowed to equilibrate for 24hours. Isotopic analysis of the headspace vapor was done with a Los Gatos Inc. water vapor isotope analyzer. Soil water potential of subsamples were measured with a water potential meter. We show for the first time that soil tension controls isotope fractionation in the resident soil water. Below a Pf 3.5 the δ-values of 18O and 2H of the headspace vapor is more positive and increases with increasing soil water potential. Surprisingly, we find that the relationship between soil tension and equilibrium fractionation is independent of soil type. However, δ-values of each soil type plot along a distinct evaporation line. These results indicate that equilibrium fractionation is affected by soil tension in addition to temperature. Therefore, at high soil water tension (under dry conditions) equilibrium fractionation is not consistent with current empirical formulations that ignore these effects. These findings may have implications for plant water uptake studies since plant root water uptake imparts tension to extract water from the soil matrix. Since this is the same physical force as soil water potential, root water uptake at high soil water potential might cause fractionation of soil water. Our work is ongoing to examine these knock-on effects.

Precipitation pulse dynamics of carbon sequestration and efflux in highly weatherable soils

NASA Astrophysics Data System (ADS)

Barron-Gafford, G.; Minor, R.; Van Haren, J. L.; Dontsova, K.; Troch, P. A.

2013-12-01

Soils are the primary pool for terrestrial carbon on Earth, and loss of that carbon to the atmosphere or hydrosphere represents a significant efflux that can impact a host of other downstream processes. Soil respiration (Rsoil), the efflux of CO2 to the atmosphere, represents the major pathway by which carbon is lost from the soil system in more weathered soils. However, in newly formed soils, chemical weathering can significantly deplete soil CO2 concentrations. As vegetation colonizes these soils, multiple interacting and contradictory pathways evolve such that soil CO2 concentrations increase in response to plant inputs but are decreased through chemical reactions. Furthermore, abiotic drivers of soil temperature and moisture likely differentially affect these processes. Understanding the bio-geo-chemical drivers and feedbacks associated with soil CO2 production and efflux in the critical zone necessitates an integrated science approach, drawing on input from plant physiologists, bio- and geochemists, and hydrologists. Here, we created a series of 1-meter deep mesocosms filled with granular basalt that supported either a woody mesquite shrub, a bunchgrass, or was left as bare soil. Use of multiple plant functional types allowed us to explore the impacts of plant structure (primarily rooting profiles) on critical zone function in terms of water and carbon exchange surrounding precipitation pulse dynamics. Each mesocosm was outfitted with an array of soil moisture, temperature, water potential, and CO2 concentration sensors at the near-surface, 30, 55, and 80cm depths to quantify patterns of soil moisture and respiratory CO2 efflux in response to rainfall events of varying magnitude and intervening periods of drought. Five replicates of each were maintained under current ambient or projected (+4oC) air temperatures. In addition, we used minirhizotrons to quantify the response of roots to episodic rainfall and confirm differences among plant types and collected soils solution samples to quantify dissolved inorganic carbon (DIC), pH, and other solute concentrations. Importantly, we found Rsoil dynamics to be nearly in direct contrast to our classic understanding of patterns of soil CO2 efflux after rain events. Rsoil rates declined immediately upon wetting and gradually increased to pre-rain rates as the soils dried. Investigation into soil CO2 profile data showed that CO2 concentrations just below the surface declined significantly from near-ambient levels to near ~50ppm, which would directly impact rates of Rsoil. We detected differences among plant functional types in terms of rooting depth, water use, photosynthetic uptake, base rates of Rsoil, the time required to return to pre-rain rates of Rsoil, and the rates of soil weathering. Combining aboveground measurements of carbon uptake with these belowground estimates of carbon pools and efflux will allow us to make much more informed projections of carbon dynamics within highly weatherable soils across a range of global climate change projections and plant functional types.

Dry/Wet Cycles Change the Activity and Population Dynamics of Methanotrophs in Rice Field Soil

PubMed Central

Ma, Ke; Conrad, Ralf

2013-01-01

The methanotrophs in rice field soil are crucial in regulating the emission of methane. Drainage substantially reduces methane emission from rice fields. However, it is poorly understood how drainage affects microbial methane oxidation. Therefore, we analyzed the dynamics of methane oxidation rates, composition (using terminal restriction fragment length polymorphism [T-RFLP]), and abundance (using quantitative PCR [qPCR]) of methanotroph pmoA genes (encoding a subunit of particulate methane monooxygenase) and their transcripts over the season and in response to alternate dry/wet cycles in planted paddy field microcosms. In situ methane oxidation accounted for less than 15% of total methane production but was enhanced by intermittent drainage. The dry/wet alternations resulted in distinct effects on the methanotrophic communities in different soil compartments (bulk soil, rhizosphere soil, surface soil). The methanotrophic communities of the different soil compartments also showed distinct seasonal dynamics. In bulk soil, potential methanotrophic activity and transcription of pmoA were relatively low but were significantly stimulated by drainage. In contrast, however, in the rhizosphere and surface soils, potential methanotrophic activity and pmoA transcription were relatively high but decreased after drainage events and resumed after reflooding. While type II methanotrophs dominated the communities in the bulk soil and rhizosphere soil compartments (and to a lesser extent also in the surface soil), it was the pmoA of type I methanotrophs that was mainly transcribed under flooded conditions. Drainage affected the composition of the methanotrophic community only minimally but strongly affected metabolically active methanotrophs. Our study revealed dramatic dynamics in the abundance, composition, and activity of the various type I and type II methanotrophs on both a seasonal and a spatial scale and showed strong effects of dry/wet alternation cycles, which enhanced the attenuation of methane flux into the atmosphere. PMID:23770899

Dust emission and soil loss due to anthropogenic activities by wind erosion simulations

NASA Astrophysics Data System (ADS)

Katra, Itzhak; Swet, Nitzan; Tanner, Smadar

2017-04-01

Wind erosion is major process of soil loss and air pollution by dust emission of clays, nutrients, and microorganisms. Many soils throughout the world are currently or potentially associated with dust emissions, especially in dryland zones. The research focuses on wind erosion in semi-arid soils (Northern Negev, Israel) that are subjected to increased human activities of urban development and agriculture. A boundary-layer wind tunnel has been used to study dust emission and soil loss by simulation and quantification of high-resolution wind processes. Field experiments were conducted in various surface types of dry loess soils. The experimental plots represent soils with long-term and short term influences of land uses such as agriculture (conventional and organic practices), grazing, and natural preserves. The wind tunnel was operated under various wind velocities that are above the threshold velocity of aeolian erosion. Total soil sediment and particulate matter (PM) fluxes were calculated. Topsoil samples from the experimental plots were analysed in the laboratory for physical and chemical characteristics including aggregation, organic matter, and high-resolution particle size distribution. The results showed variations in dust emission in response to surface types and winds to provide quantitative estimates of soil loss over time. Substantial loss of particulate matter that is < 10 micrometer in diameter, including clays and nutrients, was recorded in most experimental conditions. Integrative analyses of the topsoil properties and dust experiment highlight the significant implications for soil nutrient resources and management strategies as well as for PM loading to the atmosphere and air pollution.

[Dynamics of soil erosion at upper reaches of Minjiang River based on GIS].

PubMed

He, Xingyuan; Hu, Zhibi; Li, Yuehui; Hu, Yuanman

2005-12-01

Based on TM and ETM imagines, and employing GIS technique and empirical Revised Universal Soil Loss Equation (RUSLE) model, this paper studied the dynamics of soil erosion at the upper reaches of Minjiang River during three typical periods, with the main affecting factors analyzed. The results showed that the soil erosion area was increased by 1.28%, 1.84 % and 1.70% in 1986, 1995 and 2000, respectively. The average erosion modulus was increased from 832.64 t x km(-2) x yr(-1) in 1986 to 1048.74 t x km(-2) yr(-2) in 1995 and reached 1362.11 t x km(-2) yr(-1) in 2000, and soil loss was mainly of slight and light erosion, companying with a small quantity of middling erosion. The area of soil erosion was small, and the degree was light. There was a significant correlation between slope and soil loss, which mainly happened in the regions with a slope larger than 25 degrees, and accounted for 93.65%, 93.81% and 92.71% of the total erosion in 1986, 1995 and 2000, respectively. As for the altitude, middling, semi-high and high mountains and dry valley were liable to soil erosion, which accounted for 98.21%, 97.63% and 99.27% of the total erosion in 1986, 1995 and 2000, respectively. Different vegetation had a significant effect on soil erosion, and shrub and newly restored forest were the main erosion area. Excessive depasture not only resulted in the degradation of pasture, but also led to slight soil erosion. Land use type and soil type also contributed to soil loss, among which, dry-cinnamon soil and calcic gray-cinnamon soil were the most dangerous ones needing more protection. Soil loss was also linearly increased with increasing population and households, which suggested that the increase of population and households was the driving factor for soil loss increase in this area.

Characterization of the spatial variability of soil available zinc at various sampling densities using grouped soil type information.

PubMed

Song, Xiao-Dong; Zhang, Gan-Lin; Liu, Feng; Li, De-Cheng; Zhao, Yu-Guo

2016-11-01

The influence of anthropogenic activities and natural processes involved high uncertainties to the spatial variation modeling of soil available zinc (AZn) in plain river network regions. Four datasets with different sampling densities were split over the Qiaocheng district of Bozhou City, China. The difference of AZn concentrations regarding soil types was analyzed by the principal component analysis (PCA). Since the stationarity was not indicated and effective ranges of four datasets were larger than the sampling extent (about 400 m), two investigation tools, namely F3 test and stationarity index (SI), were employed to test the local non-stationarity. Geographically weighted regression (GWR) technique was performed to describe the spatial heterogeneity of AZn concentrations under the non-stationarity assumption. GWR based on grouped soil type information (GWRG for short) was proposed so as to benefit the local modeling of soil AZn within each soil-landscape unit. For reference, the multiple linear regression (MLR) model, a global regression technique, was also employed and incorporated the same predictors as in the GWR models. Validation results based on 100 times realization demonstrated that GWRG outperformed MLR and can produce similar or better accuracy than the GWR approach. Nevertheless, GWRG can generate better soil maps than GWR for limit soil data. Two-sample t test of produced soil maps also confirmed significantly different means. Variogram analysis of the model residuals exhibited weak spatial correlation, rejecting the use of hybrid kriging techniques. As a heuristically statistical method, the GWRG was beneficial in this study and potentially for other soil properties.

GIS-technologies application for calculation of potential soil loss of Marha River basin (Republic of Saha)

NASA Astrophysics Data System (ADS)

Shynbergenov, Y.; Maltsev, K.; Sihanova, N.

2018-01-01

In the article the presentation of estimation methods of potential soil loss in the conditions of Siberia with application of geographical information systems is resulted. For the reference area of the Marha river basin, which is a part of the Lena river catchment, there was created a specialized geographic information database of potential soil erosion, with scale of 1: 1,000,000. Digital elevation model “GMTED2010” and the hydroset layer corresponding to the scale of 1: 1,000,000 are taken to calculate the soil loss values. The formation of the geobase data is considered in detail being constructed on the basis of the multiplicative structure which reflects the main parameters of the relief (slope steepness, exposition, slope length, erosion potential of the relief), soil, climatic characteristics and modern types of land cover. At the quantitative level with sufficiently high degree of spatial detail results were obtained for calculating the potential erosion of soils. The average value of potential soil loss in the basin without taking into account the factor of land cover types, was 12.6 t/ha/yr. The calculations carried out, taking into account the types of land cover obtained from remote sensing data from outer space resulted in an appreciable reduction of the soil loss values (0.04 t/ha/yr.).

DNA-SIP Reveals the Diversity of Chemolithoautotrophic Bacteria Inhabiting Three Different Soil Types in Typical Karst Rocky Desertification Ecosystems in Southwest China.

PubMed

Li, Baoqin; Li, Zhe; Sun, Xiaoxu; Wang, Qi; Xiao, Enzong; Sun, Weimin

2018-05-04

Autotrophs that inhabit soils receive less attention than their counterparts in other ecosystems, such as deep-sea and subsurface sediments, due to the low abundance of autotrophs in soils with high organic contents. However, the karst rocky desertification region is a unique ecosystem that may have a low level of organic compounds. Therefore, we propose that karst rocky desertification ecosystems may harbor diverse autotrophic microbial communities. In this study, DNA-SIP was employed to identify the chemolithoautotrophic bacteria inhabiting three soil types (i.e., grass, forest, and agriculture) of the karst rocky desertification ecosystems. The results indicated that potential chemolithoautotrophic population was observed in each soil type, even at different time points after amending 13 C-NaHCO 3 , confirming our hypothesis that diverse autotrophs contribute to the carbon cycle in karst soils. Bacteria, such as Ralstonia, Ochrobactrum, Brevibacterium, Acinetobacter, and Corynebacterium, demonstrated their potential to assimilate inorganic carbon and reduce nitrate or thiosulfate as electron acceptors. Putative mixotrophs were identified by DNA-SIP as well, suggesting the metabolic versatility of soil microbiota. A co-occurrence network further indicated that autotrophs and heterotrophs may form associated communities to sustain the ecosystem function. Our current study revealed the metabolic diversity of autotrophic bacteria in soil habitats and demonstrated the potentially important role of chemoautotrophs in karst rocky desertification ecosystems.

Termite infestation associated with type of soil in pulau pinang, malaysia (isoptera: rhinotermitidae).

PubMed

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-12-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil.

Termite Infestation Associated with Type of Soil in Pulau Pinang, Malaysia (Isoptera: Rhinotermitidae)

PubMed Central

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-01-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil. PMID:24575252

Determination of soil erosion in a steep hill slope with different land-use types: a case study in Mertesdorf (Ruwertal/Germany).

PubMed

Hacisalihoglu, Sezgin

2007-04-01

Inappropriate land use is one of the main reasons for soil erosion and land degradation. Vine growing plays an important role in many semiarid regions all over the world as a permanent plant cover in terms of preventing erosion, sustainable use of land and water resources, defense against desertification and settling population in rural areas. In this paper, in a steep hill slope of the village Mertesdorf (Ruwertal/Germany), Algemeine boden abtrags gleichung (ABAG) have been applied to determine and compare the soil erosion amounts between the different land use types such as vine growing, forest lands, grasslands, shrubs and new forestations. The results show that the soil erosion amounts differs in a high ratio between the land use types. Soil erosion amounts in the vine growing areas are the highest (6.47 t/ha/year), then comes with 1.19 t/ha/year the over grazed grasslands and the lowest erosion amounts have been determined, as expected, in the forest lands (0.66 t/ha/year).

Acid-base properties of humic substances from composted and thermally-dried sewage sludges and amended soils as determined by potentiometric titration and the NICA-Donnan model.

PubMed

Fernández, José M; Plaza, César; Senesi, Nicola; Polo, Alfredo

2007-09-01

The acid-base properties of humic acids (HAs) and fulvic acids (FAs) isolated from composted sewage sludge (CS), thermally-dried sewage sludge (TS), soils amended with either CS or TS at a rate of 80 t ha(-1)y(-1) for 3y and the corresponding unamended soil were investigated by use of potentiometric titrations. The non-ideal competitive adsorption (NICA)-Donnan model for a bimodal distribution of proton binding sites was fitted to titration data by use of a least-squares minimization method. The main fitting parameters of the NICA-Donnan model obtained for each HA and FA sample included site densities, median affinity constants and widths of affinity distributions for proton binding to low and high affinity sites, which were assumed to be, respectively, carboxylic- and phenolic-type groups. With respect to unamended soil HA and FA, the HAs and FAs from CS, and especially TS, were characterized by smaller acidic functional group contents, larger proton binding affinities of both carboxylic- and phenolic-type groups, and smaller heterogeneity of carboxylic and phenolic-type groups. Amendment with CS or TS led to a decrease of acidic functional group contents and a slight increase of proton binding affinities of carboxylic- and phenolic-type groups of soil HAs and FAs. These effects were more evident in the HA and FA fractions from CS-amended soil than in those from TS-amended soil.

Effects of soil type and organic fertilizers on fatty acids and vitamin E in Korean ginseng (Panax ginseng Meyer).

PubMed

Chung, Ill-Min; Kim, Jae-Kwang; Yang, Jin-Hee; Lee, Ji-Hee; Park, Sung-Kyu; Son, Na-Young; Kim, Seung-Hyun

2017-12-01

This study examined the effects of soil type and fertilizer regimes on variations in fatty acids (FAs) and vitamin E (Vit-E) in 6-year-old ginseng roots. We observed significant variation in both FA and Vit-E contents owing to the type and quantity of organic fertilizer used in each soil type during cultivation. Unsaturated FAs were approximately 2.7-fold higher in ginseng than in saturated FAs. Linoleic, palmitic, and oleic acids were the most abundant FAs detected in ginseng roots. Additionally, α-tocopherol was the major Vit-E detected. In particular, the increased application of rice straw compost or food waste fertilizer elevated the quantity of nutritionally desirable FAs and bioactive Vit-E in ginseng root. Partial least square-discriminant analysis (PLS-DA) score plots showed that soil type might be the main cause of differences in FA and Vit-E levels in ginseng. Specifically, the PLS-DA model indicated that palmitic acid is a suitable FA marker in determining whether ginseng plants were grown in a paddy-converted field or an upland field. Moreover, linoleic acid levels were highly correlated with α-linolenic acid (r=0.8374; p<0.0001) according to Pearson's correlations and hierarchical clustering analysis. Hence, these preliminary results should prove useful for the reliable production of ginseng containing high phytonutrient quantities according to cultivation conditions. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil carbon distribution in Alaska in relation to soil-forming factors

USGS Publications Warehouse

Johnson, K.D.; Harden, J.; McGuire, A.D.; Bliss, N.B.; Bockheim, James G.; Clark, M.R.; Nettleton-Hollingsworth, T.; Jorgenson, M.T.; Kane, E.S.; Mack, M.; O'Donnell, J.; Ping, C.-L.; Schuur, E.A.G.; Turetsky, M.R.; Valentine, D.W.

2011-01-01

The direction and magnitude of soil organic carbon (SOC) changes in response to climate change remain unclear and depend on the spatial distribution of SOC across landscapes. Uncertainties regarding the fate of SOC are greater in high-latitude systems where data are sparse and the soils are affected by sub-zero temperatures. To address these issues in Alaska, a first-order assessment of data gaps and spatial distributions of SOC was conducted from a recently compiled soil carbon database. Temperature and landform type were the dominant controls on SOC distribution for selected ecoregions. Mean SOC pools (to a depth of 1-m) varied by three, seven and ten-fold across ecoregion, landform, and ecosystem types, respectively. Climate interactions with landform type and SOC were greatest in the uplands. For upland SOC there was a six-fold non-linear increase in SOC with latitude (i.e., temperature) where SOC was lowest in the Intermontane Boreal compared to the Arctic Tundra and Coastal Rainforest. Additionally, in upland systems mineral SOC pools decreased as climate became more continental, suggesting that the lower productivity, higher decomposition rates and fire activity, common in continental climates, interacted to reduce mineral SOC. For lowland systems, in contrast, these interactions and their impacts on SOC were muted or absent making SOC in these environments more comparable across latitudes. Thus, the magnitudes of SOC change across temperature gradients were non-uniform and depended on landform type. Additional factors that appeared to be related to SOC distribution within ecoregions included stand age, aspect, and permafrost presence or absence in black spruce stands. Overall, these results indicate the influence of major interactions between temperature-controlled decomposition and topography on SOC in high-latitude systems. However, there remains a need for more SOC data from wetlands and boreal-region permafrost soils, especially at depths > 1 m in order to fully understand the effects of climate on soil carbon in Alaska.

Identifying environmental features for land management decisions

NASA Technical Reports Server (NTRS)

1983-01-01

Pairs of HCMM day-night thermal infrared (IR) data were selected to examine patterns of surface temperature and thermal inertia (TI) of peninsular Florida. GOES and NOAA-6 thermal IR, as well as National Climatic Center temperatures and rainfall, were also used. The HCMM apparent thermal inertia (ATI) images closely correspond to the General Soil Map of Florida, based on soil drainage classes. Areas with low ATI overlay well-drained soils, such as deep sands and drained organic soils. Areas with high ATI overlay areas with wetlands and bodies of water. The HCMM ATI images also correspond well with GOES-detected winter nocturnal cold-prone areas. Use of HCMM data with Carlson's energy balance model shows both high moisture availability (MA) and high thermal inertia (TI) of wetland-type surfaces and low MA and low TI of upland, well-drained soils. Since soil areas with low TI develop higher temperatures during the day, then antecedent patterns of highest maximum daytime surface temperature can also be used to predict nocturnal cold-prone areas in Florida.

Jatropha curcas L. Root Structure and Growth in Diverse Soils

PubMed Central

Valdés-Rodríguez, Ofelia Andrea; Sánchez-Sánchez, Odilón; Pérez-Vázquez, Arturo; Caplan, Joshua S.; Danjon, Frédéric

2013-01-01

Unlike most biofuel species, Jatropha curcas has promise for use in marginal lands, but it may serve an additional role by stabilizing soils. We evaluated the growth and structural responsiveness of young J. curcas plants to diverse soil conditions. Soils included a sand, a sandy-loam, and a clay-loam from eastern Mexico. Growth and structural parameters were analyzed for shoots and roots, although the focus was the plasticity of the primary root system architecture (the taproot and four lateral roots). The sandy soil reduced the growth of both shoot and root systems significantly more than sandy-loam or clay-loam soils; there was particularly high plasticity in root and shoot thickness, as well as shoot length. However, the architecture of the primary root system did not vary with soil type; the departure of the primary root system from an index of perfect symmetry was 14 ± 5% (mean ± standard deviation). Although J. curcas developed more extensively in the sandy-loam and clay-loam soils than in sandy soil, it maintained a consistent root to shoot ratio and root system architecture across all types of soil. This strong genetic determination would make the species useful for soil stabilization purposes, even while being cultivated primarily for seed oil. PMID:23844412

Jatropha curcas L. root structure and growth in diverse soils.

PubMed

Valdés-Rodríguez, Ofelia Andrea; Sánchez-Sánchez, Odilón; Pérez-Vázquez, Arturo; Caplan, Joshua S; Danjon, Frédéric

2013-01-01

Unlike most biofuel species, Jatropha curcas has promise for use in marginal lands, but it may serve an additional role by stabilizing soils. We evaluated the growth and structural responsiveness of young J. curcas plants to diverse soil conditions. Soils included a sand, a sandy-loam, and a clay-loam from eastern Mexico. Growth and structural parameters were analyzed for shoots and roots, although the focus was the plasticity of the primary root system architecture (the taproot and four lateral roots). The sandy soil reduced the growth of both shoot and root systems significantly more than sandy-loam or clay-loam soils; there was particularly high plasticity in root and shoot thickness, as well as shoot length. However, the architecture of the primary root system did not vary with soil type; the departure of the primary root system from an index of perfect symmetry was 14 ± 5% (mean ± standard deviation). Although J. curcas developed more extensively in the sandy-loam and clay-loam soils than in sandy soil, it maintained a consistent root to shoot ratio and root system architecture across all types of soil. This strong genetic determination would make the species useful for soil stabilization purposes, even while being cultivated primarily for seed oil.

Variability of physicochemical and mineralogical characteristics of biological soil crusts at local scale in the Sahelian zone of western Niger

NASA Astrophysics Data System (ADS)

Cancès, B.; Gommeaux, G.; Marin, B.; Ponthieu, M.; Ralahimanana, C.; Ayachi, S.; Malam Issa, O.

2012-04-01

Biological soil crusts (BSC) are organo-mineral complexes resulting from the colonisation of soil surface by living microorganisms, mainly cyanobacteria. Their form, structure and composition vary depending on characteristics related to soils, biological composition and external factors (climate conditions and land uses). This study focussed on the influence of soil characteristics and human activities on BSC properties. BSC samples from Banizoumbou (Niger) taken on protected (ungrazed) and opened (grazed) fallow lands were analysed. BSC characteristics were investigated by using chemical and mineralogical techniques, microscopic and image analysis approach as well as measurements of chlorophyll a content. Hydrophobicity measurements were also performed by the water drop penetration time method. On the basis of their colour, two types of crusts have been identified : black BSC, which occur in protected and unprotected fallow, and red BSC, which only occur in depression zones of the protected fallow. The black crusts are dominated by quartz grains trapped in the network of the filaments of Cyanobacteria. A sandy texture and a reverse grading of mineral particles are typical of physical soil crusts called sieving crusts. The dark surface coloration of the BSC is related to the high density of filamentous Cyanobacteria. Black crusts samples from protected fallow exhibit high biomass related to high cover, whereas samples from grazed fallow lands showed low biomass related to low surface cover. In both cases, hydrophobicity measurements revealed that these BSC are wettable to slightlty water repellent. However, higher values of hydrophobicity were observed on ungrazed samples compared to their grazed counterpart. This variability is likely due to the difference of cover between the two types of samples. This type of BSC corresponds to a later successional stage than the red-coloured BSC. The red BSC has a loamy-sandy texture and a normal grading typical of physical soil crusts called depositional crusts. Its mineralogy differs from the black crusts by its higher proportions of clay minerals and iron oxides (higher amounts of Al2O3 and Fe2O3). A vertical succession of BSC leads to higher content of organic carbon. The trace elements contents are also higher in this type of crust. The red colour is related to the low surface cover by Cyanobacteria. High values of hydrophobicity were measured for the red crusts, which are slightly to strongly water repellent. Compared to the underlying soil horizons, the two types of BSC differ granulometrically (higher proportions of clay and loam), mineralogically and chemically (lower SiO2 content and higher Al2O3, Fe2O3, organic carbon and trace elements contents). These results will contribute to the understanding of water dynamics at the surface of soil in the Sahelian region of Niger. They will also contribute in understanding the potential ecological roles and the spatial extent of BSC in Sahelian environment.

Monitoring rangeland dynamics in Senegal with advanced very high resolution radiometer data

USGS Publications Warehouse

Tappan, G. Gray; Tyler, Dean J.; Wehde, M. E.; Moore, Donald G.

1992-01-01

Time‐series Normalized Difference Vegetation Index (NDVI) data, computed from Advanced Very High Resolution Radiometer data, are being used by regional and national programs in the African Sahel to monitor seasonal rangeland conditions. The data are often used as indicators of grazing conditions and drought. However, distinguishing rangelands from other vegetation cover types on NDVI images is difficult. A second complication is that rangeland types and their associated productivity vary geographically by soil type. To effectively assess rangeland conditions, seasonal fluctuations (due to climatic cycles) must be isolated from long‐term production characteristics associated with vegetation type and soil differences. Rangeland NDVI dynamics, including qualitative assessments of rangeland production, and the timing and length of the growing season in Senegal were examined by using 7.4‐km global area coverage satellite data. Analyses were based on 10‐day NDVI composite image data from 1982 through 1989. The NDVI image data were stratified by rangeland and soil polygons derived from locally available resource maps. Time‐series NDVI statistics were calculated from the resource polygons that had been interpreted into high, medium, and low production rangelands. Analysts monitoring rangeland conditions can better identify seasonal anomalies such as drought by comparing production potential within homogeneous; resource polygons with the current NDVI data.

The magnetic susceptibility of soils in Krakow, southern Poland

NASA Astrophysics Data System (ADS)

Wojas, Anna

2017-06-01

Studies into the magnetic susceptibility have been used to assess the soils contamination in the Krakow area. The results of topsoil (over a 2 × 2 km grid), subsoil (37 shallow holes) and soil samples (112) measurements were presented as maps of soil magnetic susceptibility (both volume and mass) illustrating the distribution of parameters in topsoil horizon (0-10 cm) and differential magnetic susceptibility maps between topsoil horizon and subsoil (40-60 cm). All evidence leads to the finding that the highest values of magnetic susceptibility of soil are found exclusively in industrial areas. Taking into consideration the type of land use, the high median value (89.8 × 10-8 m3kg-1) was obtained for samples of cultivated soils and is likely to be connected with occurrence of fertile soil (chernozem). Moreover, enrichment of soils with Pb and Zn accompanies magnetic susceptibility anomalies in the vicinity of the high roads and in the steelworks area, respectively.

Metal content of earthworms in sludge-amended soils: uptake and loss

DOE Office of Scientific and Technical Information (OSTI.GOV)

Neuhauser, E.F.; Malecki, M.R.; Cukic, Z.V.

1985-11-01

The widespread practice of landspreading of sludge has raised concern about increasing concentrations of potentially toxic metals in soils, with the possibility of these metals adversely impacting terrestrial and aquatic ecosystems. Earthworms, as one of the largest components of the soil biota, are useful indicators of potentially toxic soil metal concentrations. The study describes the metal content of five metals (Cd, Cu, Ni, Pb, and Zn) in one earthworm species, Allolobophora tuberculata, as a function of varying soil metal concentrations in the same soil type and the ability of the earthworms to bioconcentrate the five metals. The rate of uptakemore » of the five metals in earthworms with initially low concentrations of metals placed in a soil with high metal concentrations was evaluated for a 112 day period. The rate of loss of the five metals in earthworms with initially high metal concentrations placed in soil with low metal concentrations was also examined.« less

Identifying natural and anthropogenic sources of metals in urban and rural soils using GIS-based data, PCA, and spatial interpolation

PubMed Central

Davis, Harley T.; Aelion, C. Marjorie; McDermott, Suzanne; Lawson, Andrew B.

2009-01-01

Determining sources of neurotoxic metals in rural and urban soils is important for mitigating human exposure. Surface soil from four areas with significant clusters of mental retardation and developmental delay (MR/DD) in children, and one control site were analyzed for nine metals and characterized by soil type, climate, ecological region, land use and industrial facilities using readily-available GIS-based data. Kriging, principal component analysis (PCA) and cluster analysis (CA) were used to identify commonalities of metal distribution. Three MR/DD areas (one rural and two urban) had similar soil types and significantly higher soil metal concentrations. PCA and CA results suggested that Ba, Be and Mn were consistently from natural sources; Pb and Hg from anthropogenic sources; and As, Cr, Cu, and Ni from both sources. Arsenic had low commonality estimates, was highly associated with a third PCA factor, and had a complex distribution, complicating mitigation strategies to minimize concentrations and exposures. PMID:19361902

Adsorption experiment of toxic micro-pollutants derived from automobiles using red soil.

PubMed

Kawai, Takahiro; Ichiki, Atsushi; Sawada, Yasunori

2015-01-01

In some countries, non-point source pollution derived from a city's economic activities tends to be a barrier to the improvement of water quality. Roadway runoff is known to contain toxic micro-pollutants such as polycyclic aromatic hydrocarbons (PAHs). Conversely, red soil is known to adsorb some organic matter. In this study, artificial roadway runoff water containing toxic micro-pollutants was made using roadway dust collected from a highway, and used for both batch-type tests and soil column tests with red soil in order to understand adsorption ability of the red soil on such toxic micro-pollutants, especially PAHs. In the batch-type tests, PAHs could be removed by approximately 40% when the contact time was 90 minutes. In the soil column tests, PAHs were removed by more than 80% while suspended solids were removed by more than 90%. Notably, PAHs with a high molecular weight were removed more readily in the tests than PAHs with a low molecular weight.

Thermodynamic parameters of U (VI) sorption onto soils in aquatic systems.

PubMed

Kumar, Ajay; Rout, Sabyasachi; Ghosh, Malay; Singhal, Rakesh Kumar; Ravi, Pazhayath Mana

2013-01-01

The thermodynamic parameters viz. the standard free energy (∆Gº), Standard enthalpy change (∆Hº) and standard entropy change (∆Sº) were determined using the obtained values of distribution coefficient (kd) of U (VI) in two different types of soils (agricultural and undisturbed) by conducting a batch equilibrium experiment with aqueous media (groundwater and deionised water) at two different temperatures 25°C and 50°C. The obtained distribution coefficients (kd) values of U for undisturbed soil in groundwater showed about 75% higher than in agricultural soil at 25°C while in deionised water, these values were highly insignificant for both soils indicating that groundwater was observed to be more favorable for high surface sorption. At 50°C, the increased kd values in both soils revealed that solubility of U decreased with increasing temperature. Batch adsorption results indicated that U sorption onto soils was promoted at higher temperature and an endothermic and spontaneous interfacial process. The high positive values of ∆Sº for agricultural soil suggested a decrease in sorption capacity of U in that soil due to increased randomness at solid-solution interface. The low sorption onto agricultural soil may be due to presence of high amount of coarse particles in the form of sand (56%). Geochemical modeling predicted that mixed hydroxo-carbonato complexes of uranium were the most stable and abundant complexes in equilibrium solution during experimental.

Evaporative losses from soils covered by physical and different types of biological soil crusts

USGS Publications Warehouse

Chamizo, S.; Cantón, Y.; Domingo, F.; Belnap, J.

2013-01-01

Evaporation of soil moisture is one of the most important processes affecting water availability in semiarid ecosystems. Biological soil crusts, which are widely distributed ground cover in these ecosystems, play a recognized role on water processes. Where they roughen surfaces, water residence time and thus infiltration can be greatly enhanced, whereas their ability to clog soil pores or cap the soil surface when wetted can greatly decrease infiltration rate, thus affecting evaporative losses. In this work, we compared evaporation in soils covered by physical crusts, biological crusts in different developmental stages and in the soils underlying the different biological crust types. Our results show that during the time of the highest evaporation (Day 1), there was no difference among any of the crust types or the soils underlying them. On Day 2, when soil moisture was moderately low (11%), evaporation was slightly higher in well-developed biological soil crusts than in physical or poorly developed biological soil crusts. However, crust removal did not cause significant changes in evaporation compared with the respective soil crust type. These results suggest that the small differences we observed in evaporation among crust types could be caused by differences in the properties of the soil underneath the biological crusts. At low soil moisture (<6%), there was no difference in evaporation among crust types or the underlying soils. Water loss for the complete evaporative cycle (from saturation to dry soil) was similar in both crusted and scraped soils. Therefore, we conclude that for the specific crust and soil types tested, the presence or the type of biological soil crust did not greatly modify evaporation with respect to physical crusts or scraped soils.

Hemipteran diversity in Endau-Rompin plantation

NASA Astrophysics Data System (ADS)

Bakri, Asraf; Rahim, Faszly

2015-09-01

Study on hemipteran at Endau Rompin Plantation (LER), Pahang was conducted at oil palm plantation planted at different type of soils. The aim of the study was to determine hemipteran diversity in oil palm ecosystem. Sampling was done from April 2012 to September 2012 by using Malaise and impact traps. Cicadellidae was the most abundance and dominance family with 105 individuals and 6 species (=morphospecies) recorded. The rarefaction curve becomes flatter to the right indicating a reasonable number of individual samples have been taken. Peat area show high Shannon index and Margalef index values compared to clay area.There were significant differences in hemipteran community between three type of soils (χ2=98.751,df=58,p<0.05). As such, hemipteran abundance in oil palm plantation is affected by the type of soil.

Effects of Erosion from Mounds of Different Termite Genera on Distinct Functional Grassland Types in an African Savannah.

PubMed

Gosling, Cleo M; Cromsigt, Joris P G M; Mpanza, Nokukhanya; Olff, Han

A key aspect of savannah vegetation heterogeneity is mosaics formed by two functional grassland types, bunch grasslands, and grazing lawns. We investigated the role of termites, important ecosystem engineers, in creating high-nutrient patches in the form of grazing lawns. Some of the ways termites can contribute to grazing lawn development is through erosion of soil from aboveground mounds to the surrounding soil surface. This may alter the nutrient status of the surrounding soils. We hypothesize that the importance of this erosion varies with termite genera, depending on feeding strategy and mound type. To test this, we simulated erosion by applying mound soil from three termite genera ( Macrotermes , Odontotermes , and Trinervitermes ) in both a field experiment and a greenhouse experiment. In the greenhouse experiment, we found soils with the highest macro nutrient levels (formed by Trinervitermes ) promoted the quality and biomass of both a lawn ( Digitaria longiflora ) and a bunch ( Sporobolus pyramidalis ) grass species. In the field we found that soils with the highest micro nutrient levels (formed by Macrotermes ) showed the largest increase in cover of grazing lawn species. By linking the different nutrient availability of the mounds to the development of different grassland states, we conclude that the presence of termite mounds influences grassland mosaics, but that the type of mound plays a crucial role in determining the nature of the effects.

[Soil water reservoir properties and influencing factors of typical newly-established green belts of Shanghai Chenshan Botanical Garden, China.

PubMed

Wu, Hai Bing; Fang, Hai Lan; Peng, Hong Ling

2016-05-01

The effects of different vegetation types, compaction ways and soil basic physico-chemical properties on soil water reservoir in the typical newly-established green belts of Shanghai Chenshan Botanical Garden were studied. The results showed that the total reservoir capacity, detention capacity and effective storage for the Botanical Garden were lower than those of natural forests. However, the dead storage was very high accounting for 60.6% of the total reservoir capacity, resulting in reduced flood storage and drainage capacity for the greens. The total reservoir capacity and detention capacity of different vegetation types were in order of brush land> tree land> grassland> bamboo land> bare land. The effective storages of the brush land and the tree land were relatively high, whereas those of the bare land and the bamboo land were lower. The ratios of the dead storage over the total re-servoir capacity in the bare land and the bamboo land were relatively high with the values 65.5% and 67.6%, respectively. The total reservoir capacity, detention capacity and effective storage of the brush land were significantly different from those of the bare land. The vegetation significantly improved the water storage and retention capacity for the soil, while the compaction by large machinery and man-caused trampling reduced the total reservoir capacity, detention capacity and effective storage of soils. The water reservoir properties were influenced by soil bulk density, saturated hydraulic conductivity, capillary porosity, non-capillary porosity, total porosity, clay and organic matter contents. Therefore, improving the soil physico-chemical properties might increase the soil reservoir capacity of the urban green belt effectively.

Estimating mercury emissions resulting from wildfire in forests of the Western United States.

PubMed

Webster, Jackson P; Kane, Tyler J; Obrist, Daniel; Ryan, Joseph N; Aiken, George R

2016-10-15

Understanding the emissions of mercury (Hg) from wildfires is important for quantifying the global atmospheric Hg sources. Emissions of Hg from soils resulting from wildfires in the Western United States was estimated for the 2000 to 2013 period, and the potential emission of Hg from forest soils was assessed as a function of forest type and soil-heating. Wildfire released an annual average of 3100±1900kg-Hgy(-1) for the years spanning 2000-2013 in the 11 states within the study area. This estimate is nearly 5-fold lower than previous estimates for the study region. Lower emission estimates are attributed to an inclusion of fire severity within burn perimeters. Within reported wildfire perimeters, the average distribution of low, moderate, and high severity burns was 52, 29, and 19% of the total area, respectively. Review of literature data suggests that that low severity burning does not result in soil heating, moderate severity fire results in shallow soil heating, and high severity fire results in relatively deep soil heating (<5cm). Using this approach, emission factors for high severity burns ranged from 58 to 640μg-Hgkg-fuel(-1). In contrast, low severity burns have emission factors that are estimated to be only 18-34μg-Hgkg-fuel(-1). In this estimate, wildfire is predicted to release 1-30gHgha(-1) from Western United States forest soils while above ground fuels are projected to contribute an additional 0.9 to 7.8gHgha(-1). Land cover types with low biomass (desert scrub) are projected to release less than 1gHgha(-1). Following soil sources, fuel source contributions to total Hg emissions generally followed the order of duff>wood>foliage>litter>branches. Copyright © 2016 Elsevier B.V. All rights reserved.

The abundance of functional genes, cbbL, nifH, amoA and apsA, and bacterial community structure of intertidal soil from Arabian Sea.

PubMed

Keshri, Jitendra; Yousuf, Basit; Mishra, Avinash; Jha, Bhavanath

2015-06-01

The Gulf of Cambay is a trumpet-shaped inlet of the Arabian Sea, located along the west coast of India and confronts a high tidal range with strong water currents. The region belongs to a semi-arid zone and saline alkaline intertidal soils are considered biologically extreme. The selected four soil types (S1-S4) were affected by salinity, alkalinity and sodicity. Soil salinity ranged from 20 to 126 dS/m, soil pH 8.6-10.0 with high sodium adsorption ratio (SAR) and exchangeable sodium percentage (ESP). Abundance of the key functional genes like cbbL, nifH, amoA and apsA involved in biogeochemical cycling were targeted using qPCR, which varied from (2.36 ± 0.03) × 10(4) to (2.87 ± 0.26) × 10(8), (1.18 ± 0.28) × 10(6) to (1.01 ± 0.26) × 10(9), (1.41 ± 0.21) × 10(6) to (1.29 ± 0.05) × 10(8) and (8.47 ± 0.23) × 10(4) to (1.73 ± 0.01) × 10(6) per gram dry weight, respectively. The microbial community structure revealed that soils S1 and S3 were dominated by phylum Firmicutes whereas S4 and S2 showed an abundance of Proteobacterial clones. These soils also represented Bacteroidetes, Chloroflexi, Actinobacteria, Planctomycetes and Acidobacteria clones. Molecular phylogeny showed a significant variation in the bacterial community distribution among the intertidal soil types. A high number of novel taxonomic units were observed which makes the intertidal zone a unique reservoir of unidentified bacterial taxa that may be explored further. Copyright © 2015 Elsevier GmbH. All rights reserved.

Comparison of whole-cell fatty acid (MIDI) or phospholipid fatty acid (PLFA) extractants as biomarkers to profile soil microbial communities.

PubMed

Fernandes, Marcelo F; Saxena, Jyotisna; Dick, Richard P

2013-07-01

The whole-cell lipid extraction to profile microbial communities on soils using fatty acid (FA) biomarkers is commonly done with the two extractants associated with the phospholipid fatty acid (PLFA) or Microbial IDentification Inc. (MIDI) methods. These extractants have very different chemistry and lipid separation procedures, but often shown a similar ability to discriminate soils from various management and vegetation systems. However, the mechanism and the chemistry of the exact suite of FAs extracted by these two methods are poorly understood. Therefore, the objective was to qualitatively and quantitatively compare the MIDI and PLFA microbial profiling methods for detecting microbial community shifts due to soil type or management. Twenty-nine soil samples were collected from a wide range of soil types across Oregon and extracted FAs by each method were analyzed by gas chromatography (GC) and GC-mass spectrometry. Unlike PLFA profiles, which were highly related to microbial FAs, the overall MIDI-FA profiles were highly related to the plant-derived FAs. Plant-associated compounds were quantitatively related to particulate organic matter (POM) and qualitatively related to the standing vegetation at sampling. These FAs were negatively correlated to respiration rate normalized to POM (RespPOM), which increased in systems under more intensive management. A strong negative correlation was found between MIDI-FA to PLFA ratios and total organic carbon (TOC). When the reagents used in MIDI procedure were tested for the limited recovery of MIDI-FAs from soil with high organic matter, the recovery of MIDI-FA microbial signatures sharply decreased with increasing ratios of soil to extractant. Hence, the MIDI method should be used with great caution for interpreting changes in FA profiles due to shifts in microbial communities.

Efficiency of urease and nitrification inhibitors in reducing ammonia volatilization from diverse nitrogen fertilizers applied to different soil types and wheat straw mulching.

PubMed

San Francisco, Sara; Urrutia, Oscar; Martin, Vincent; Peristeropoulos, Angelos; Garcia-Mina, Jose Maria

2011-07-01

Some authors suggest that the absence of tillage in agricultural soils might have an influence on the efficiency of nitrogen applied in the soil surface. In this study we investigate the influence of no-tillage and soil characteristics on the efficiency of a urease inhibitor (N-(n-butyl)thiophosphoric triamide, NBPT) and a nitrification inhibitor (diciandiamide, DCD) in decreasing ammonia volatilization from urea and ammonium nitrate (AN), respectively. The results indicate that ammonia volatilization in soils amended with urea was significantly higher than in those fertilized with AN. Likewise, the main soil factors affecting ammonia volatilization from urea are clay and sand soil contents. While clay impedes ammonia volatilization, sand favours it. The presence of organic residues on soil surface (no-tillage) tends to increase ammonia volatilization from urea, although this fact depended on soil type. The presence of NBPT in urea fertilizer significantly reduced soil ammonia volatilization. This action of NBPT was negatively affected by acid soil pH and favoured by soil clay content. The presence of organic residues on soil surface amended with urea increased ammonia volatilization, and was particularly high in sandy compared with clay soils. Application of NBPT reduced ammonia volatilization although its efficiency is reduced in acid soils. Concerning AN fertilization, there were no differences in ammonia volatilization with or without DCD in no-tillage soils. Copyright © 2011 Society of Chemical Industry.

Soil type and texture impacts on soil organic carbon accumulation in a sub-tropical agro-ecosystem

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gonçalves, Daniel Ruiz Potma; Sa, Joao Carlos de Moraes; Mishra, Umakant

Soil organic carbon (C) plays a fundamental role in tropical and subtropical soil fertility, agronomic productivity, and soil health. As a tool for understand ecosystems dynamics, mathematical models such as Century have been used to assess soil's capacity to store C in different environments. However, as Century was initially developed for temperate ecosystems, several authors have hypothesized that C storage may be underestimated by Century in Oxisols. We tested the hypothesis that Century model can be parameterized for tropical soils and used to reliably estimate soil organic carbon (SOC) storage. The aim of this study was to investigate SOC storagemore » under two soil types and three textural classes and quantify the sources and magnitude of uncertainty using the Century model. The simulation for SOC storage was efficient and the mean residue was 10 Mg C ha -1 (13%) for n = 91. However, a different simulation bias was observed for soil with <600 g kg -1 of clay was 16.3 Mg C ha -1 (18%) for n = 30, and at >600 g kg -1 of clay, was 4 Mg C ha -1 (5%) for n = 50, respectively. The results suggest a non-linear effect of clay and silt contents on C storage in Oxisols. All types of soil contain nearly 70% of Fe and Al oxides in the clay fraction and a regression analysis showed an increase in model bias with increase in oxides content. Consequently, inclusion of mineralogical control of SOC stabilization by Fe and Al (hydro) oxides may improve results of Century model simulations in soils with high oxides contents« less

Evaluation of the assimilation of As by vegetables in contaminated soils submitted to a remediation process

NASA Astrophysics Data System (ADS)

Pérez-Sirvent, Carmen; Martinez Sanchez, Maria Jose; Agudo, Ines; Belen Martinez, Lucia; Bech, Jaume

2016-04-01

A greenhouse trial was carried out to evaluate the assimilation of heavy metals by three types of plants (lettuce, onion and broccoli), different parts of which are destined for human and farm animals consumption (leaves, roots, fruits). The experiments were carried out to check the validity of the use of calcareous materials to recover soils contaminated with heavy metals. The aim of this work was to apply a technology for decontamination to ensure that As do not enter into the trophic chain at risky levels and analyze and to assess the risk pre and post operational of the different treatments proposed. The materials used was a soils to be remediated (mining soils) and the materials used for remediation were lime filler and Construction and Demolition Waste (CDW). The plants were cultivated in greenhouse with several types of soil. Five experiments were used, namely, Tc (contaminated soil), T1 (uncontaminated soil (blank soil)), T2 (50% T1 + 50% Tc), T3 (Tc + (25%) lime residues coming from quarries) and T4 (Tc + (25%) residues coming from demolition and construction activities). The entire project involves twenty experiments which were prepared from soils highly contaminated mixed with two types of calcareous materials. The total As content of the soils samples, rhizosphere and vegetable samples, were measured and the translocation factor (TF), which is defined as the ratio of metal concentration in the leaves or shoots to the roots, and the Bioconcentration factor (BCF), which is defined as the ratio of metal concentration in the roots to that in soil were calculated. The use of CDR is shown to be a suitable way for remediating soils contaminated by metals. The methodology permits a revalorization of CDW.

Nitrogen amendments have predictable effects on soil microbial communities and processes

NASA Astrophysics Data System (ADS)

Ramirez, K. S.; Craine, J. M.; Fierer, N.

2011-12-01

Ecosystems worldwide are receiving increasing amounts of reactive nitrogen (N) through anthropogenic activities. While there has been much effort devoted to quantifying aboveground impacts of anthropogenic N effects, less work has focused on identifying belowground impacts. Bacteria play critical roles in ecosystem processes and identifying how anthropogenic N impacts bacterial communities may elucidate how critical microbially-mediated ecosystem functions are altered by N additions. In order to connect changes in soil processes to changes in the microbial community, we need to first determine if the changes are consistent across different soil types and ecosystems. We assessed the patterns of N effects across a variety of ecosystems in two ways. First, utilizing long-term experimental N gradients at Cedar Creek LTER, MN and Kellogg Biological Station LTER, MI, we examined the response of microbial communities to anthropogenic N additions. Using high-throughput pyrosequencing techniques we quantified changes in soil microbial communities across the nitrogen gradients. We observed strong directional shifts in community composition at both sites; N fertilization consistently impacted both the phylogenetic and taxonomic structure of soil bacterial community structure in a predictable manner regardless of ecosystem type. For example, at both sites Acidobacteria experienced significant declines as nitrogen increased, while other groups such as Actinobacteria and Bacteroidetes increased in relative abundance. Our results suggest that bacterial communities across these N fertility gradients are structured by either nitrogen and/or soil carbon availability, rather than by shifts in the plant community or soil pH indirectly associated with the elevated nitrogen inputs. Still, this field-work does not incorporate changes in soil processes (e.g. soil respiration) or microbial activity (e.g. microbial biomass and extracellular enzyme activity), or separate N from C effects. To address these factors, we performed a lab experiment, amending 30 soils collected from across North America with inorganic N. From this year-long incubation we obtained soil respiration, microbial biomass, bacterial community and extracellular enzyme activity measurements. Across all soil types we consistently observed a significant decrease in both soil respiration, approximately 10%, and microbial biomass, approximately 35%. Using high-throughput pyrosequencing we identified seven bacterial groups that responded significantly to the N additions, including those observed in our field survey. Together, this work suggests that increases in soil N shifts the functional capabilities of the microbial community and highlights possibly mechanisms behind the observed changes.

Soil Fertility Map for Food Legumes Production Areas in China

NASA Astrophysics Data System (ADS)

Li, Ling; Yang, Tao; Redden, Robert; He, Weifeng; Zong, Xuxiao

2016-05-01

Given the limited resources of fossil energy, and the environmental risks of excess fertilizer on crops, it is time to reappraise the potential role of food legume biological nitrogen fixation (BNF) as sources of nitrogen for cropping systems in China. 150 soil samples across 17 provinces and 2 municipalities of China were collected and analyzed. A distribution map of the soil fertilities and their patterns of distribution was constructed. The pH results indicated that soils were neutral to slightly alkaline overall. The soil organic matter (SOM) and the available nitrogen (AN) content were relatively low, while the available phosphorus (AP) and available potassium (AK) contents were from moderate to high. Production areas of food legumes (faba bean, pea, adzuki bean, mung bean and common bean) were clearly separated into 4 soil fertility type clusters. In addition, regions with SOM, AN, AP and AK deficiency, high acidity and high alkalinity were listed as target areas for further soil improvement. The potential was considered for biological nitrogen fixation to substitute for the application of mineral nitrogen fertiliser.

Soil Fertility Map for Food Legumes Production Areas in China

PubMed Central

Li, Ling; Yang, Tao; Redden, Robert; He, Weifeng; Zong, Xuxiao

2016-01-01

Given the limited resources of fossil energy, and the environmental risks of excess fertilizer on crops, it is time to reappraise the potential role of food legume biological nitrogen fixation (BNF) as sources of nitrogen for cropping systems in China. 150 soil samples across 17 provinces and 2 municipalities of China were collected and analyzed. A distribution map of the soil fertilities and their patterns of distribution was constructed. The pH results indicated that soils were neutral to slightly alkaline overall. The soil organic matter (SOM) and the available nitrogen (AN) content were relatively low, while the available phosphorus (AP) and available potassium (AK) contents were from moderate to high. Production areas of food legumes (faba bean, pea, adzuki bean, mung bean and common bean) were clearly separated into 4 soil fertility type clusters. In addition, regions with SOM, AN, AP and AK deficiency, high acidity and high alkalinity were listed as target areas for further soil improvement. The potential was considered for biological nitrogen fixation to substitute for the application of mineral nitrogen fertiliser. PMID:27212262

Dielectric constants of soils at microwave frequencies-2

NASA Technical Reports Server (NTRS)

Wang, J.; Schmugge, T.; Williams, D.

1978-01-01

The dielectric constants of several soil samples were measured at frequencies of 5 and 19 GHz using the infinite transmission line method. The results of these measurements are presented and discussed with respect to soil types and texture structures. A comparison is made with other measurements at 1.4 GHz. At all three frequencies, the dependence of dielectric constant on soil moisture can be approximated by two straight lines. At low moisture, the slope is less than at high moisture level. The intersection of the two lines is believed to be a function of soil texture.

Ethnopedology and soil quality of bamboo (Bambusa sp.) based agroforestry system.

PubMed

Arun Jyoti, Nath; Lal, Rattan; Das, Ashesh Kumar

2015-07-15

It is widely recognized that farmers' hold important knowledge of folk soil classification for agricultural land for its uses, yet little has been studied for traditional agroforestry systems. This article explores the ethnopedology of bamboo (Bambusa sp.) based agroforestry system in North East India, and establishes the relationship of soil quality index (SQI) with bamboo productivity. The study revealed four basic folk soil (mati) types: kalo (black soil), lal (red soil), pathal (stony soil) and balu (sandy soil). Of these, lal mati soil was the most predominant soil type (~ 40%) in bamboo-based agroforestry system. Soil physio-chemical parameters were studied to validate the farmers' soil hierarchal classification and also to correlate with productivity of the bamboo stand. Farmers' hierarchal folk soil classification was consistent with the laboratory scientific analysis. Culm production (i.e. measure of productivity of bamboo) was the highest (27culmsclump(-1)) in kalo mati (black soil) and the lowest (19culmsclump(-1)) in balu mati (sandy soil). Linear correlation of individual soil quality parameter with bamboo productivity explained 16 to 49% of the variability. A multiple correlation of the best fitted linear soil quality parameter (soil organic carbon or SOC, water holding capacity or WHC, total nitrogen) with productivity improved explanatory power to 53%. Development of SQI from ten relevant soil quality parameters and its correlation with bamboo productivity explained the 64% of the variation and therefore, suggest SQI as the best determinant of bamboo yield. Data presented indicate that the kalo mati (black soil) is sustainable or sustainable with high input. However, the other three folk soil types (red, stony and sandy soil) are also sustainable but for other land uses. Therefore, ethnopedological studies may move beyond routine laboratory analysis and incorporate SQI for assessing the sustainability of land uses managed by the farmers'. Additional research is required to incorporate principal component analysis for improving the SQI and site potential assessment. It is also important to evaluate the minimum data set (MDS) required for SQI and productivity assessment in agroforestry systems. Copyright © 2015 Elsevier B.V. All rights reserved.

Seasonal Dynamics of Soil Labile Organic Carbon and Enzyme Activities in Relation to Vegetation Types in Hangzhou Bay Tidal Flat Wetland

PubMed Central

Shao, Xuexin; Yang, Wenying; Wu, Ming

2015-01-01

Soil labile organic carbon and soil enzymes play important roles in the carbon cycle of coastal wetlands that have high organic carbon accumulation rates. Soils under three vegetations (Phragmites australis, Spartina alterniflora, and Scirpusm mariqueter) as well as bare mudflat in Hangzhou Bay wetland of China were collected seasonally. Seasonal dynamics and correlations of soil labile organic carbon fractions and soil enzyme activities were analyzed. The results showed that there were significant differences among vegetation types in the contents of soil organic carbon (SOC) and dissolved organic carbon (DOC), excepting for that of microbial biomass carbon (MBC). The P. australis soil was with the highest content of both SOC (7.86 g kg-1) and DOC (306 mg kg-1), while the S. mariqueter soil was with the lowest content of SOC (6.83 g kg-1), and the bare mudflat was with the lowest content of DOC (270 mg kg-1). Soil enzyme activities were significantly different among vegetation types except for urease. The P. australis had the highest annual average activity of alkaline phosphomonoesterase (21.4 mg kg-1 h-1), and the S. alterniflora had the highest annual average activities of β-glycosidase (4.10 mg kg-1 h-1) and invertase (9.81mg g-1 24h-1); however, the bare mudflat had the lowest activities of alkaline phosphomonoesterase (16.2 mg kg-1 h-1), β-glycosidase (2.87 mg kg-1 h-1), and invertase (8.02 mg g-1 24h-1). Analysis also showed that the soil labile organic carbon fractions and soil enzyme activities had distinct seasonal dynamics. In addition, the soil MBC content was significantly correlated with the activities of urease and β-glucosidase. The DOC content was significantly correlated with the activities of urease, alkaline phosphomonoesterase, and invertase. The results indicated that vegetation type is an important factor influencing the spatial-temporal variation of soil enzyme activities and labile organic carbon in coastal wetlands. PMID:26560310

Relationships between soil organic matter, nutrients, bacterial community structure, and the performance of microbial fuel cells.

PubMed

Dunaj, Sara J; Vallino, Joseph J; Hines, Mark E; Gay, Marcus; Kobyljanec, Christine; Rooney-Varga, Juliette N

2012-02-07

Microbial fuel cells (MFCs) offer the potential for generating electricity, mitigating greenhouse gas emissions, and bioremediating pollutants through utilization of a plentiful renewable resource: soil organic carbon. We analyzed bacterial community structure, MFC performance, and soil characteristics in different microhabitats within MFCs constructed from agricultural or forest soils in order to determine how soil type and bacterial dynamics influence MFC performance. Our results indicated that MFCs constructed from agricultural soil had power output about 17 times that of forest soil-based MFCs and respiration rates about 10 times higher than forest soil MFCs. Agricultural soil MFCs had lower C:N ratios, polyphenol content, and acetate concentrations than forest soil MFCs. Bacterial community profile data indicate that the bacterial communities at the anode of the high power MFCs were less diverse than in low power MFCs and were dominated by Deltaproteobacteria, Geobacter, and to a lesser extent, Clostridia, while low-power MFC anode communities were dominated by Clostridia. These results suggest that the presence of organic carbon substrate (acetate) was not the major limiting factor in selecting for highly electrogenic bacterial communities, while the quality of available organic matter may have played a significant role in supporting high performing bacterial communities.

Metal concentrations in aquatic macrophytes as influenced by soil and acidification

USGS Publications Warehouse

Sparling, D.W.; Lowe, T.P.

1998-01-01

Bioavailability of metals to aquatic plants is dependent on many factors including ambient metal concentration, pH of soil or water, concentration of ligands, competition with other metals for binding sites, and mode of exposure. Plants may be exposed to metals through water, air, or soil, depending on growth form. This paper examines the influence of soil type under two regimens of water acidification on metal uptake by four species of aquatic macrophytes: smartweed (Polygonum sagittatum), burreed (Sparganium americanum), pondweed (Potamogeton diversifolius), and bladderwort (Utricularia vulgaris) in constructed, experimentally acidified wetlands. Soil types consisted of a comparatively high-metal clay or a lower-metal sandy loam. Each pond was either acidified to pH ca. 4.85.3 or allowed to remain circumneutral. Metal concentrations tended to be higher in the submerged bladderwort and pondweed than in the emergent burreed and smartweed. Soils were important to plant metal concentrations in all species, but especially in the emergents. Acidification influenced plant concentrations of some metals and was especially important in the submerged pondweed. Bioaccumulation of metals occurred for Mn, B, Sr, Ba, and Zn, compared to soil concentrations.

Long-term organic-inorganic fertilization ensures great soil productivity and bacterial diversity after natural-to-agricultural ecosystem conversion.

PubMed

Xun, Weibing; Xu, Zhihui; Li, Wei; Ren, Yi; Huang, Ting; Ran, Wei; Wang, Boren; Shen, Qirong; Zhang, Ruifu

2016-09-01

Natural ecosystems comprise the planet's wild plant and animal resources, but large tracts of land have been converted to agroecosystems to support the demand for agricultural products. This conversion limits the number of plant species and decreases the soil biological diversity. Here we used high-throughput 16S rRNA gene sequencing to evaluate the responses of soil bacterial communities in long-term converted and fertilized red soils (a type of Ferralic Cambisol). We observed that soil bacterial diversity was strongly affected by different types of fertilization management. Oligotrophic bacterial taxa demonstrated large relative abundances in chemically fertilized soil, whereas copiotrophic bacterial taxa were found in large relative abundances in organically fertilized and fallow management soils. Only organic-inorganic fertilization exhibited the same local taxonomic and phylogenetic diversity as that of a natural ecosystem. However, the independent use of organic or inorganic fertilizer reduced local taxonomic and phylogenetic diversity and caused biotic homogenization. This study demonstrated that the homogenization of bacterial communities caused by natural-to-agricultural ecosystem conversion can be mitigated by employing rational organic-inorganic fertilization management.

Physical and ecological controllers of the microbial responses to drying and rewetting in soil

NASA Astrophysics Data System (ADS)

Leizeaga, Ainara; Meisner, Annelein; Bååth, Erland; Rousk, Johannes

2017-04-01

Soil moisture is one of the most powerful factors that regulate microbial activity in soil. The variation of moisture leads to drying-rewetting (DRW) events which are known to induce enormous dynamics in soil biogeochemistry; however, the microbial underpinnings are mostly unknown. Rewetting a dry soil can result in two response patterns of bacterial growth. In the Type 1 response, bacteria start growing immediately after rewetting with rates that increase in a linear fashion to converge with those prior to the DRW within hours. This growth response coincides with respiration rates that peak immediately after rewetting to then exponentially decrease. In the Type 2 response, bacterial growth remains very low after rewetting during a lag period of up to 20 hours. Bacteria then increase their growth rates exponentially to much higher rates than those before the DRW event. This growth response coincides with respiration rates that increase to high rates immediately after rewetting that then remain elevated and sometimes even increase further in sync with the growth increase. Previous studies have shown that (i) extended drying (ii) starving before DRW and (iii) inhibitors combined with drought could change the bacterial response from Type 1 to Type 2. This suggested that the response of bacteria upon rewetting could be related to the harshness of the disturbance as experienced by the microbes. In the present study, we set out to study if reduced harshness could change a Type 2 response into a Type 1 response. We hypothesized that (1) a reduced physical harshness of drying and (2) induced tolerance to drying in microbial communities could change a Type 2 response into a Type 1 growth response upon rewetting. To address this, two experiments were performed. First, soils were partially dried to different water contents and bacterial response upon rewetting was measured. Second, soils were exposed to repeated DRW cycles (< 9 cycles) and the bacterial response was followed after rewetting. A less harsh drying (partial drying) of a soil could change the growth responses to rewetting. The lag period decreased with less complete drying to eventually became 0, transitioning from a Type 2 to a Type 1. Even after a Type 1 response was induced, further reduction of harshness could also lead to a faster recovery of growth rates. Our results support the hypothesis: the physical harshness of drying can determine the microbial survival and thus the type of bacterial growth response. Subjecting soil to DRW cycles could also induce a change from a Type 2 to Type 1 growth response. This suggested that there was a community shift towards higher drought-tolerance. Thus, identical physical disturbance was less harsh for a community that has been subjected to more drying rewetting cycles. To predict how the microbial community's control of the soil C budget of ecosystems is affected warming-induced drought, our results demonstrate that both the physical characteristics of the disturbance and the community's tolerance to drought need to be considered.

Gravity-driven transport of three engineered nanomaterials in unsaturated soils and their effects on soil pH and nutrient release.

PubMed

Conway, Jon R; Keller, Arturo A

2016-07-01

The gravity-driven transport of TiO2, CeO2, and Cu(OH)2 engineered nanomaterials (ENMs) and their effects on soil pH and nutrient release were measured in three unsaturated soils. ENM transport was found to be highly limited in natural soils collected from farmland and grasslands, with the majority of particles being retained in the upper 0-3 cm of the soil profile, while greater transport depth was seen in a commercial potting soil. Physical straining appeared to be the primary mechanism of retention in natural soils as ENMs immediately formed micron-scale aggregates, which was exacerbated by coating particles with Suwannee River natural organic matter (NOM) which promote steric hindrance. Small changes in soil pH were observed in natural soils contaminated with ENMs that were largely independent of ENM type and concentration, but differed from controls. These changes may have been due to enhanced release of naturally present pH-altering ions (Mg(2+), H(+)) in the soil via substitution processes. These results suggest ENMs introduced into soil will likely be highly retained near the source zone. Copyright © 2016 Elsevier Ltd. All rights reserved.

Comparing soil functions for a wide range of agriculture soils focusing on production for bioenergy using a combined isotope-based observation and modelling approach

NASA Astrophysics Data System (ADS)

Leistert, Hannes; Herbstritt, Barbara; Weiler, Markus

2017-04-01

Increase crop production for bioenergy will result in changes in land use and the resulting soil functions and may generate new chances and risks. However, detailed data and information are still missing how soil function may be altered under changing crop productions for bioenergy, in particular for a wide range of agricultural soils since most data are currently derived from individual experimental sites studying different bioenergy crops at one location. We developed a new, rapid measurement approach to investigate the influence of bioenergy plants on the water cycle and different soil functions (filter and buffer of water and N-cycling). For this approach, we drilled 89 soil cores (1-3 m deep) in spring and fall at 11 sites with different soil properties and climatic conditions comparing different crops (grass, corn, willow, poplar, and other less common bioenergy crops) and analyzing 1150 soil samples for water content, nitrate concentration and stable water isotopes. We benchmarked a soil hydrological model (1-D numerical Richards equation, ADE, water isotope fractionation including liquid and vapor composition of isotopes) using longer-term climate variables and water isotopes in precipitation to derive crop specific parameterization and to specifically validate the differences in water transport and water partitioning into evaporation, transpiration and groundwater recharge among the sites and crops using the water isotopes in particular. The model simulation were in good agreement with the observed isotope profiles and allowed us to differentiate among the different crops. We defined different indicators for the soil functions considered in this study. These indicators included the proportion of groundwater recharge, transit time of water (different percentiles) though the upper 2m and nutrient leaching potential (e.g. nitrate) during the dormant season from the rooting zone. The parameterized model was first used to calculate the indicators for the sampled locations and to derive the changes in soil functions by altering the land cover among the different bioenergy crops in comparison to the grassland as a reference. We could show that percolation is strongly influenced by the crops and climate, the transit time is influenced by a combination of soil type, climate and land use, but the effect of soil type is very strong and the nitrate leaching is strongly influenced by soil type. The high variability of transit times and nitrate leaching are due to high variability of the temporal distribution of precipitation. Finally, the model was used to regionalized the indicators to a wide range of soils in the state of Baden-Württemberg and to assess if there are locations where bioenergy crops may improve the considered soil function. Our idea behind this was to propose location where specific bioenergy crops may be highly suitable to improve the current soil function to increase for example the protection of groundwater for drinking water, reduce erosion risk or increase water availability. The proposed method allows to assess the influence of different bioenergy crops on soil functions without costly multi-year measurement systems for assessing the soil functions using soil water content measurements or/and soil water suction devices.

Tightly-Coupled Plant-Soil Nitrogen Cycling: Comparison of Organic Farms across an Agricultural Landscape

PubMed Central

Bowles, Timothy M.; Hollander, Allan D.; Steenwerth, Kerri; Jackson, Louise E.

2015-01-01

How farming systems supply sufficient nitrogen (N) for high yields but with reduced N losses is a central challenge for reducing the tradeoffs often associated with N cycling in agriculture. Variability in soil organic matter and management of organic farms across an agricultural landscape may yield insights for improving N cycling and for evaluating novel indicators of N availability. We assessed yields, plant-soil N cycling, and root expression of N metabolism genes across a representative set of organic fields growing Roma-type tomatoes (Solanum lycopersicum L.) in an intensively-managed agricultural landscape in California, USA. The fields spanned a three-fold range of soil carbon (C) and N but had similar soil types, texture, and pH. Organic tomato yields ranged from 22.9 to 120.1 Mg ha-1 with a mean similar to the county average (86.1 Mg ha-1), which included mostly conventionally-grown tomatoes. Substantial variability in soil inorganic N concentrations, tomato N, and root gene expression indicated a range of possible tradeoffs between yields and potential for N losses across the fields. Fields showing evidence of tightly-coupled plant-soil N cycling, a desirable scenario in which high crop yields are supported by adequate N availability but low potential for N loss, had the highest total and labile soil C and N and received organic matter inputs with a range of N availability. In these fields, elevated expression of a key gene involved in root N assimilation, cytosolic glutamine synthetase GS1, confirmed that plant N assimilation was high even when inorganic N pools were low. Thus tightly-coupled N cycling occurred on several working organic farms. Novel combinations of N cycling indicators (i.e. inorganic N along with soil microbial activity and root gene expression for N assimilation) would support adaptive management for improved N cycling on organic as well as conventional farms, especially when plant-soil N cycling is rapid. PMID:26121264

Tightly-Coupled Plant-Soil Nitrogen Cycling: Comparison of Organic Farms across an Agricultural Landscape.

PubMed

Bowles, Timothy M; Hollander, Allan D; Steenwerth, Kerri; Jackson, Louise E

2015-01-01

How farming systems supply sufficient nitrogen (N) for high yields but with reduced N losses is a central challenge for reducing the tradeoffs often associated with N cycling in agriculture. Variability in soil organic matter and management of organic farms across an agricultural landscape may yield insights for improving N cycling and for evaluating novel indicators of N availability. We assessed yields, plant-soil N cycling, and root expression of N metabolism genes across a representative set of organic fields growing Roma-type tomatoes (Solanum lycopersicum L.) in an intensively-managed agricultural landscape in California, USA. The fields spanned a three-fold range of soil carbon (C) and N but had similar soil types, texture, and pH. Organic tomato yields ranged from 22.9 to 120.1 Mg ha-1 with a mean similar to the county average (86.1 Mg ha-1), which included mostly conventionally-grown tomatoes. Substantial variability in soil inorganic N concentrations, tomato N, and root gene expression indicated a range of possible tradeoffs between yields and potential for N losses across the fields. Fields showing evidence of tightly-coupled plant-soil N cycling, a desirable scenario in which high crop yields are supported by adequate N availability but low potential for N loss, had the highest total and labile soil C and N and received organic matter inputs with a range of N availability. In these fields, elevated expression of a key gene involved in root N assimilation, cytosolic glutamine synthetase GS1, confirmed that plant N assimilation was high even when inorganic N pools were low. Thus tightly-coupled N cycling occurred on several working organic farms. Novel combinations of N cycling indicators (i.e. inorganic N along with soil microbial activity and root gene expression for N assimilation) would support adaptive management for improved N cycling on organic as well as conventional farms, especially when plant-soil N cycling is rapid.

Controls on denitrification in riparian soils in headwater catchments of a hardwood forest in the Catskill Mountains, U.S.A.

USGS Publications Warehouse

Ashby, J.A.; Bowden, W.B.; Murdoch, Peter S.

1998-01-01

Denitrification in riparian soils is thought to be an important factor that reduces hydrologic export of nitrate from forested and agricultural catchments. A 2-y study to identify the soil factors most closely associated with denitrification in riparian soils in headwater catchments within the Catskill Mountains of New York, included field surveys of surface and subsurface denitrification rates, and an amendment experiment to assess the relative effects of increases in available carbon and substrate NO-/3 on denitrification rates. Denitrification rates were measured by acetylene inhibition during incubation of intact soil cores from eight soil types representing a range of drainage classes. Soil cores were analyzed for organic matter, total P, extractable NO-/3-N and NH+/4-N, organic N, pH, moisture, porosity, and water-filled pore space, to determine which of these factors were most closely associated with denitrification. The distribution of denitrification rates found during the field surveys was highly skewed, with many low or zero values and few high values. Denitrification rates were positively associated with high soil organic matter, total P, and water-filled pore space, and were highest in seep (poorly-drained) soils, toeslope (seasonally-drained) soils, and stream-edge (poorly- to moderately well-drained) soils in which these three soil characteristics were typically high. Denitrification rates in these wet locations were also positively associated with soil NH+/4-N concentration and pH, but not with NO-/3-N concentration, suggesting that the rate of NO-/3 supply (via nitrification or hydrologic transport) was more important than the instantaneous concentration of NO-/3-N in the soils. The amendment experiment indicated that denitrification in soil types studied was most responsive to added glucose alone or with NO-/3. Thus, in these soils, a combination of slow rates of NO-/3 supply and low available carbon appears to limit denitrification. Annual denitrification rates in spring-fed soils (0.74 to 1.43 kg N ha-1 y-1) were up to 5 times greater than in other surface soils, yet these soils accounted for only 1.8% of the catchment's N loss through denitrification because they represent less than 3% of the catchment area. Dry upland soils constituted 71% of the catchment area and accounted for 91% of the catchment's N loss through denitrification. Annual denitrification in the catchment equaled about 65% of stream NO-/3-N and NH+/4-N export and 14% of precipitation NO-/3-N and NH+/4-N inputs. Denitrification appears to be important relative to N input and export in these Catskill catchments.

Composition of methane-oxidizing bacterial communities as a function of nutrient loading in the Florida everglades.

PubMed

Chauhan, Ashvini; Pathak, Ashish; Ogram, Andrew

2012-10-01

Agricultural runoff of phosphorus (P) in the northern Florida Everglades has resulted in several ecosystem level changes, including shifts in the microbial ecology of carbon cycling, with significantly higher methane being produced in the nutrient-enriched soils. Little is, however, known of the structure and activities of methane-oxidizing bacteria (MOB) in these environments. To address this, 0 to 10 cm plant-associated soil cores were collected from nutrient-impacted (F1), transition (F4), and unimpacted (U3) areas, sectioned in 2-cm increments, and methane oxidation rates were measured. F1 soils consumed approximately two-fold higher methane than U3 soils; additionally, most probable numbers of methanotrophs were 4-log higher in F1 than U3 soils. Metabolically active MOB containing pmoA sequences were characterized by stable-isotope probing using 10 % (v/v) (13)CH(4). pmoA sequences, encoding the alpha subunit of methane monooxygenase and related to type I methanotrophs, were identified from both impacted and unimpacted soils. Additionally, impacted soils also harbored type II methanotrophs, which have been shown to exhibit preferences for high methane concentrations. Additionally, across all soils, novel pmoA-type sequences were also detected, indicating presence of MOB specific to the Everglades. Multivariate statistical analyses confirmed that eutrophic soils consisted of metabolically distinct MOB community that is likely driven by nutrient enrichment. This study enhances our understanding on the biological fate of methane being produced in productive wetland soils of the Florida Everglades and how nutrient-enrichment affects the composition of methanotroph bacterial communities.

Root exudation and root development of lettuce (Lactuca sativa L. cv. Tizian) as affected by different soils

PubMed Central

Neumann, G.; Bott, S.; Ohler, M. A.; Mock, H.-P.; Lippmann, R.; Grosch, R.; Smalla, K.

2014-01-01

Development and activity of plant roots exhibit high adaptive variability. Although it is well-documented, that physicochemical soil properties can strongly influence root morphology and root exudation, particularly under field conditions, a comparative assessment is complicated by the impact of additional factors, such as climate and cropping history. To overcome these limitations, in this study, field soils originating from an unique experimental plot system with three different soil types, which were stored at the same field site for 10 years and exposed to the same agricultural management practice, were used for an investigation on effects of soil type on root development and root exudation. Lettuce (Lactuca sativa L. cv. Tizian) was grown as a model plant under controlled environmental conditions in a minirhizotrone system equipped with root observation windows (rhizoboxes). Root exudates were collected by placing sorption filters onto the root surface followed by subsequent extraction and GC-MS profiling of the trapped compounds. Surprisingly, even in absence of external stress factors with known impact on root exudation, such as pH extremes, water and nutrient limitations/toxicities or soil structure effects (use of sieved soils), root growth characteristics (root length, fine root development) as well as profiles of root exudates were strongly influenced by the soil type used for plant cultivation. The results coincided well with differences in rhizosphere bacterial communities, detected in field-grown lettuce plants cultivated on the same soils (Schreiter et al., this issue). The findings suggest that the observed differences may be the result of plant interactions with the soil-specific microbiomes. PMID:24478764

Root exudation and root development of lettuce (Lactuca sativa L. cv. Tizian) as affected by different soils.

PubMed

Neumann, G; Bott, S; Ohler, M A; Mock, H-P; Lippmann, R; Grosch, R; Smalla, K

2014-01-01

Development and activity of plant roots exhibit high adaptive variability. Although it is well-documented, that physicochemical soil properties can strongly influence root morphology and root exudation, particularly under field conditions, a comparative assessment is complicated by the impact of additional factors, such as climate and cropping history. To overcome these limitations, in this study, field soils originating from an unique experimental plot system with three different soil types, which were stored at the same field site for 10 years and exposed to the same agricultural management practice, were used for an investigation on effects of soil type on root development and root exudation. Lettuce (Lactuca sativa L. cv. Tizian) was grown as a model plant under controlled environmental conditions in a minirhizotrone system equipped with root observation windows (rhizoboxes). Root exudates were collected by placing sorption filters onto the root surface followed by subsequent extraction and GC-MS profiling of the trapped compounds. Surprisingly, even in absence of external stress factors with known impact on root exudation, such as pH extremes, water and nutrient limitations/toxicities or soil structure effects (use of sieved soils), root growth characteristics (root length, fine root development) as well as profiles of root exudates were strongly influenced by the soil type used for plant cultivation. The results coincided well with differences in rhizosphere bacterial communities, detected in field-grown lettuce plants cultivated on the same soils (Schreiter et al., this issue). The findings suggest that the observed differences may be the result of plant interactions with the soil-specific microbiomes.

Effect of land use change on soil properties and functions

NASA Astrophysics Data System (ADS)

Tonutare, Tonu; Kõlli, Raimo; Köster, Tiina; Rannik, Kaire; Szajdak, Lech; Shanskiy, Merrit

2014-05-01

For good base of sustainable land management and ecologically sound protection of soils are researches on soil properties and functioning. Ecosystem approach to soil properties and functioning is equally important in both natural and cultivated land use conditions. Comparative analysis of natural and agro-ecosystems formed on similar soil types enables to elucidate principal changes caused by land use change (LUC) and to elaborate the best land use practices for local pedo-ecological conditions. Taken for actual analysis mineral soils' catena - rendzina → brown soils → pseudopodzolic soils → gley-podzols - represent ca 1/3 of total area of Estonian normal mineral soils. All soils of this catena differ substantially each from other by calcareousness, acidity, nutrition conditions, fabric and humus cover type. This catena (representative to Estonian pedo-ecological conditions) starts with drought-prone calcareous soils. Brown (distributed in northern and central Estonia) and pseudopodzolic soils (in southern Estonia) are the most broadly acknowledged for agricultural use medium-textured high-quality automorphic soils. Dispersedly distributed gley-podzols are permanently wet and strongly acid, low-productivity sandy soils. In presentation four complex functions of soils are treated: (1) being a suitable soil environment for plant cover productivity (expressed by annual increment, Mg ha-1 yr-1); (2) forming adequate conditions for decomposition, transformation and conversion of fresh falling litter (characterized by humus cover type); (3) deposition of humus, individual organic compounds, plant nutrition elements, air and water, and (4) forming (bio)chemically variegated active space for soil type specific edaphon. Capacity of soil cover as depositor (3) depends on it thickness, texture, calcareousness and moisture conditions. Biological activity of soil (4) is determined by fresh organic matter influx, quality and quantity of biochemical substances and humus, and pedo-ecological conditions. LUC from natural to arable is accompanied by different regulations: (1) regular restoration of plant available nutrition elements' stocks in soil, (2) regulation (if needed) of water regime of gleyed and gley soils, (3) optimizing of soil actual acidity by liming, and (4) forming a suitable for crops seed bed instead of natural epipedon. Principal changes are occurred in fabric and agrochemical properties of topsoil and in soil functioning. The connected with LUC changes in soil functioning are: (1) increase of openness level of chemical elements cycling and nutrition elements concentration in phytomass, and (2) decrease of total phytomass, species diversity, amount of annual falling litter and content of mortmass in soil cover. These changes lead to decreasing of biological control on soil resources, flux of energy and substances to soil processes, and volume of cycling. At the same time the intensity of organic matter decomposition and outflow of nutrition elements are increased. All these changes are resulted by alteration of food chains and exhausting of nutrition elements' stocks. The changes in soil functioning (decrease or increase of productivity) depend much on soil type. The aspects of functioning, which do not changed with LUC are chemical-textural potential of soil cover and functioning character of subsoil. The sound matching of soil and plant cover is of decisive importance for sustainable functioning of ecosystem and in attaining a good environmental status of the area.

Pupal development of Ceratitis capitata (Diptera: Tephritidae) and Diachasmimorpha longicaudata (Hymenoptera: Braconidae) at different moisture values in four soil types.

PubMed

Bento, F de M M; Marques, R N; Costa, M L Z; Walder, J M M; Silva, A P; Parra, J R P

2010-08-01

This study aimed to evaluate adult emergence and duration of the pupal stage of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), and emergence of the fruit fly parasitoid, Diachasmimorpha longicaudata (Ashmead), under different moisture conditions in four soil types, using soil water matric potential. Pupal stage duration in C. capitata was influenced differently for males and females. In females, only soil type affected pupal stage duration, which was longer in a clay soil. In males, pupal stage duration was individually influenced by moisture and soil type, with a reduction in pupal stage duration in a heavy clay soil and in a sandy clay, with longer duration in the clay soil. As matric potential decreased, duration of the pupal stage of C. capitata males increased, regardless of soil type. C. capitata emergence was affected by moisture, regardless of soil type, and was higher in drier soils. The emergence of D. longicaudata adults was individually influenced by soil type and moisture factors, and the number of emerged D. longicaudata adults was three times higher in sandy loam and lower in a heavy clay soil. Always, the number of emerged adults was higher at higher moisture conditions. C. capitata and D. longicaudata pupal development was affected by moisture and soil type, which may facilitate pest sampling and allow release areas for the parasitoid to be defined under field conditions.

Decontaminating soil organic pollutants with manufactured nanoparticles.

PubMed

Li, Qi; Chen, Xijuan; Zhuang, Jie; Chen, Xin

2016-06-01

Organic pollutants in soils might threaten the environmental and human health. Manufactured nanoparticles are capable to reduce this risk efficiently due to their relatively large capacity of sorption and degradation of organic pollutants. Stability, mobility, and reactivity of nanoparticles are prerequisites for their efficacy in soil remediation. On the basis of a brief introduction of these issues, this review provides a comprehensive summary of the application and effectiveness of various types of manufactured nanoparticles for removing organic pollutants from soil. The main categories of nanoparticles include iron (oxides), titanium dioxide, carbonaceous, palladium, and amphiphilic polymeric nanoparticles. Their advantages (e.g., unique properties and high sorption capacity) and disadvantages (e.g., high cost and low recovery) for soil remediation are discussed with respect to the characteristics of organic pollutants. The factors that influence the decontamination effects, such as properties, surfactants, solution chemistry, and soil organic matter, are addressed.

Soil, vegetation, and seed bank of a Sonoran Desert ecosystem along an exotic plant (Pennisetum ciliare) treatment gradient.

PubMed

Abella, Scott R; Chiquoine, Lindsay P; Backer, Dana M

2013-10-01

Ecological conditions following removal of exotic plants are a key part of comprehensive environmental management strategies to combat exotic plant invasions. We examined ecological conditions following removal of the management-priority buffelgrass (Pennisetum ciliare) in Saguaro National Park of the North American Sonoran Desert. We assessed soil, vegetation, and soil seed banks on seven buffelgrass site types: five different frequencies of buffelgrass herbicide plus hand removal treatments (ranging from 5 years of annual treatment to a single year of treatment), untreated sites, and non-invaded sites, with three replicates for each of the seven site types. The 22 measured soil properties (e.g., pH) differed little among sites. Regarding vegetation, buffelgrass cover was low (≤1% median cover), or absent, across all treated sites but was high (10-70%) in untreated sites. Native vegetation cover, diversity, and composition were indistinguishable across site types. Species composition was dominated by native species (>93% relative cover) across all sites except untreated buffelgrass sites. Most (38 species, 93%) of the 41 species detected in soil seed banks were native, and native seed density did not differ significantly across sites. Results suggest that: (1) buffelgrass cover was minimal across treated sites; (2) aside from high buffelgrass cover in untreated sites, ecological conditions were largely indistinguishable across sites; (3) soil seed banks harbored ≥12 species that were frequent in the aboveground vegetation; and (4) native species dominated post-treatment vegetation composition, and removing buffelgrass did not result in replacement by other exotic species.

Soil, Vegetation, and Seed Bank of a Sonoran Desert Ecosystem Along an Exotic Plant ( Pennisetum ciliare) Treatment Gradient

NASA Astrophysics Data System (ADS)

Abella, Scott R.; Chiquoine, Lindsay P.; Backer, Dana M.

2013-10-01

Ecological conditions following removal of exotic plants are a key part of comprehensive environmental management strategies to combat exotic plant invasions. We examined ecological conditions following removal of the management-priority buffelgrass ( Pennisetum ciliare) in Saguaro National Park of the North American Sonoran Desert. We assessed soil, vegetation, and soil seed banks on seven buffelgrass site types: five different frequencies of buffelgrass herbicide plus hand removal treatments (ranging from 5 years of annual treatment to a single year of treatment), untreated sites, and non-invaded sites, with three replicates for each of the seven site types. The 22 measured soil properties (e.g., pH) differed little among sites. Regarding vegetation, buffelgrass cover was low (≤1 % median cover), or absent, across all treated sites but was high (10-70 %) in untreated sites. Native vegetation cover, diversity, and composition were indistinguishable across site types. Species composition was dominated by native species (>93 % relative cover) across all sites except untreated buffelgrass sites. Most (38 species, 93 %) of the 41 species detected in soil seed banks were native, and native seed density did not differ significantly across sites. Results suggest that: (1) buffelgrass cover was minimal across treated sites; (2) aside from high buffelgrass cover in untreated sites, ecological conditions were largely indistinguishable across sites; (3) soil seed banks harbored ≥12 species that were frequent in the aboveground vegetation; and (4) native species dominated post-treatment vegetation composition, and removing buffelgrass did not result in replacement by other exotic species.

Predicting Greenhouse Gas Emissions and Soil Carbon from Changing Pasture to an Energy Crop

PubMed Central

Duval, Benjamin D.; Anderson-Teixeira, Kristina J.; Davis, Sarah C.; Keogh, Cindy; Long, Stephen P.; Parton, William J.; DeLucia, Evan H.

2013-01-01

Bioenergy related land use change would likely alter biogeochemical cycles and global greenhouse gas budgets. Energy cane (Saccharum officinarum L.) is a sugarcane variety and an emerging biofuel feedstock for cellulosic bio-ethanol production. It has potential for high yields and can be grown on marginal land, which minimizes competition with grain and vegetable production. The DayCent biogeochemical model was parameterized to infer potential yields of energy cane and how changing land from grazed pasture to energy cane would affect greenhouse gas (CO2, CH4 and N2O) fluxes and soil C pools. The model was used to simulate energy cane production on two soil types in central Florida, nutrient poor Spodosols and organic Histosols. Energy cane was productive on both soil types (yielding 46–76 Mg dry mass⋅ha−1). Yields were maintained through three annual cropping cycles on Histosols but declined with each harvest on Spodosols. Overall, converting pasture to energy cane created a sink for GHGs on Spodosols and reduced the size of the GHG source on Histosols. This change was driven on both soil types by eliminating CH4 emissions from cattle and by the large increase in C uptake by greater biomass production in energy cane relative to pasture. However, the change from pasture to energy cane caused Histosols to lose 4493 g CO2 eq⋅m−2 over 15 years of energy cane production. Cultivation of energy cane on former pasture on Spodosol soils in the southeast US has the potential for high biomass yield and the mitigation of GHG emissions. PMID:23991028

Responses of Soil Microbial Communities to Experimental Warming in Alpine Grasslands on the Qinghai-Tibet Plateau

PubMed Central

He, Xingyuan; Liu, Wenjie; Zhao, Qian; Zhao, Lin; Tian, Chunjie

2014-01-01

Global surface temperature is predicted to increase by at least 1.5°C by the end of this century. However, the response of soil microbial communities to global warming is still poorly understood, especially in high-elevation grasslands. We therefore conducted an experiment on three types of alpine grasslands on the Qinghai-Tibet Plateau to study the effect of experimental warming on abundance and composition of soil microbial communities at 0–10 and 10–20 cm depths. Plots were passively warmed for 3 years using open-top chambers and compared to adjacent control plots at ambient temperature. Soil microbial communities were assessed using phospholipid fatty acid (PLFA) analysis. We found that 3 years of experimental warming consistently and significantly increased microbial biomass at the 0–10 cm soil depth of alpine swamp meadow (ASM) and alpine steppe (AS) grasslands, and at both the 0–10 and 10–20 cm soil depths of alpine meadow (AM) grasslands, due primarily to the changes in soil temperature, moisture, and plant coverage. Soil microbial community composition was also significantly affected by warming at the 0–10 cm soil depth of ASM and AM and at the 10–20 cm soil depth of AM. Warming significantly decreased the ratio of fungi to bacteria and thus induced a community shift towards bacteria at the 0–10 cm soil depth of ASM and AM. While the ratio of arbuscular mycorrhizal fungi to saprotrophic fungi (AMF/SF) was significantly decreased by warming at the 0–10 cm soil depth of ASM, it was increased at the 0–10 cm soil depth of AM. These results indicate that warming had a strong influence on soil microbial communities in the studied high-elevation grasslands and that the effect was dependent on grassland type. PMID:25083904

Impacts of Surrounding Land Cover on Headwater Wetland Edaphic Habitat Types and Their Associated Microbial Communities

NASA Astrophysics Data System (ADS)

Moon, J. B.; Wardrop, D. H.; Smithwick, E. A.

2010-12-01

Although small in size, headwater wetland complexes provide a disproportionate share of microbially mediated ecosystem services to the surrounding landscape and hydroscape. Two services that are of current interest to scientists and managers, given their role in regulating climate and water quality, are the retention and transformation of carbon and nitrogen pools. Although it is the wetland complex’s geographic position between the landscape and hydroscape that creates these hotspots of ecosystem function, continuous shifts in the surrounding scapes can also affect the complex’s transformational capacity through changes to its natural hydrologic disturbance regime and subsequent material fluxes. We have begun to investigate the influence of surrounding land cover and associated differences in hydrology on wetland edaphic habitats and their associated microbial communities. These studies are taking place in wetland complexes located in the headwaters of the Chesapeake Bay Watershed, within the Ridge and Valley Region of central Pennsylvania. Within this region, surrounding land cover ranges from intact forested buffers to a matrix of land cover types (e.g., mixed forest, grassland, and impermeable surfaces). Over a preliminary six-month collection period we found higher frequency and intensity of hydrologic fluctuations in wetlands surrounded by a matrix of land cover types, compared to highly stable saturated conditions of wetland complexes with intact forested buffers. Differences were also found in both the abundances of edaphic habitats as well as in the types of habitats present within these surrounding land cover groups. Wetlands with intact forested buffers had (1) fresh organic residue soils with high overall microbial biomasses and relatively high abundances of microeukaryotic groups, (2) reduced muck soils with relatively large proportions of branched fatty acid microbial groups, and (3) carbon and nutrient depleted sandy mineral soils with relatively low microbial biomasses. Riparian wetland complexes surrounded by a matrix of land cover types had narrower ranges of soil properties and were predominately high pH clay loam soils dominated by bacterial groups. Although these wetland complexes had fewer edaphic habitat types than wetland complexes with intact forested buffers, preliminary investigations using the DeNitrification-DeComposition (DNDC) model showed that their higher pH levels and hydrological fluctuations could make them more suitable environments for higher rates of complete denitrification. However, depending on the depth of the water table, wetland complexes surrounded by a matrix of land cover types could also transition into hotspots of methanogenesis. These initial hypotheses will be further refined with additional hydrologic, climatic, vegetation, and soils data and tested over the next year using methods such as push-pull denitrification.

Radar response to vegetation. [soil moisture mapping via microwave backscattering

NASA Technical Reports Server (NTRS)

Ulaby, F. T.

1975-01-01

Active microwave measurements of vegetation backscatter were conducted to determine the utility of radar in mapping soil moisture through vegetation and mapping crop types. Using a truck-mounted boom, spectral response data were obtained for four crop types (corn, milo, soybeans, and alfalfa) over the 4-8 GHz frequency band, at incidence angles of 0 to 70 degrees in 10-degree steps, and for all four linear polarization combinations. Based on a total of 125 data sets covering a wide range of soil moisture, content, system design criteria are proposed for each of the aforementioned objectives. Quantitative soil moisture determination was best achieved at the lower frequency end of the 4-8 GHz band using HH polarized waves in the 5- to 15-degree incidence angle range. A combination of low and high frequency measurements are suggested for classifying crop types. For crop discrimination, a dual-frequency dual-polarization (VV and cross) system operating at incidence angles above 40 degrees is suggested.

The Evaluation of Basal Respiration for Various Soil Textures in Ecologically Sensitive Area

NASA Astrophysics Data System (ADS)

Huličová, P.; Kotorová, D.; Fazekašová, D.; Hynšt, J.

2017-10-01

The present contribution was focused on monitoring changes in the soil basal respiration in different textures of soil in the dry polder Beša. The research was conducted between 2012 and 2014 on soil type Fluvisol locations on three soil textures: clay - loam soil, clayey soil and clay soil in three soil depths. The basal respiration (BR) has been determine by soil CO2 production measuring from incubated soil samples in serum bottles in laboratory condition. Release Co2 has been analysed by gas chromatography. Content of clay particles were in the range 52.18 % to 81.31%, indicating the high difference between the minimum and maximum content. By using of multiple LSD-test we recorded statistically significant impact of clay on basal respiration. Results confirm the values of basal respiration with the depth of the soil profile decreased.

Nitrogen fixation in biological soil crusts from southeast Utah, USA

USGS Publications Warehouse

Belnap, Jayne

2002-01-01

Biological soil crusts can be the dominant source of N for arid land ecosystems. We measured potential N fixation rates biweekly for 2 years, using three types of soil crusts: (1) crusts whose directly counted cells were >98% Microcoleus vaginatus (light crusts); (2) crusts dominated by M. vaginatus, but with 20% or more of the directly counted cells represented by Nostoc commune and Scytonema myochrous (dark crusts); and (3) the soil lichen Collema sp. At all observation times, Collema had higher nitrogenase activity (NA) than dark crusts, which had higher NA than light crusts, indicating that species composition is critical when estimating N inputs. In addition, all three types of crusts generally responded in a similar fashion to climate conditions. Without precipitation within a week of collection, no NA was recorded, regardless of other conditions being favorable. Low (<1°C) and high (>26°C) temperatures precluded NA, even if soils were moist. If rain or snow melt had occurred 3 or less days before collection, NA levels were highly correlated with daily average temperatures of the previous 3 days (r2=0.93 for Collema crusts; r2=0.86 for dark crusts and r2=0.83 for light crusts) for temperatures between 1°C and 26°C. If a precipitation event followed a long dry period, NA levels were lower than if collection followed a time when soils were wet for extended periods (e.g., winter). Using a combination of data from a recording weather datalogger, time-domain reflectometry, manual dry-down curves, and N fixation rates at different temperatures, annual N input from the different crust types was estimated. Annual N input from dark crusts found at relatively undisturbed sites was estimated at 9 kg ha–1 year–1. With 20% cover of the N-fixing soil lichen Collema, inputs are estimated at 13 kg ha–1 year–1. N input from light crusts, generally indicating soil surface disturbance, was estimated at 1.4 kg ha–1 year–1. The rates in light crusts are expected to be highly variable, as disturbance history will determine cyanobacterial biomass and therefore N fixation rates.

Major and trace element geochemistry and background concentrations for soils in Connecticut

USGS Publications Warehouse

Brown, Craig; Thomas, Margaret A.

2014-01-01

Soil samples were collected throughout Connecticut (CT) to determine the relationship of soil chemistry with the underlying geology and to better understand background concentrations of major and trace elements in soils. Soil samples were collected (1) from the upper 5 cm of surficial soil at 100 sites, (2) from the A horizon at 86 of these sites, and (3) from the deeper horizon, typically the C horizon, at 79 of these sites. The <2-millimeter fraction of each sample was analyzed for 44 elements by methods that yield the total or near-total elemental content. Sample sites were characterized by glacial setting, underlying bedrock geology, and soil type. These spatial data were used with element concentrations in the C-horizon to relate geologic factors to soil chemistry. Concentrations of elements in C-horizon soils varied with grain size in surficial glacial materials and with underlying rock types, as determined using nonparametric statistical procedures. Concentrations of most elements in C-horizon soils showed a positive correlation with silt and (or) clay content and were higher in surficial materials mapped as till, thick till, and (or) fines. Element concentrations in C-horizon soils showed significant differences among the underlying geologic provinces and were highest overlying the Grenville Belt and (or) the Grenville Shelf Sequence Provinces in western CT. These rocks consist mainly of carbonates and the relatively high element concentrations in overlying soils likely result from less influence of dilution by quartz compared to other provinces. Element concentrations in C-horizon soils in CT were compared with those in samples from other New England states overlying similar lithologic bedrock types. The upper range of As concentrations in C-horizon soils overlying the New Hampshire-Maine (NH-ME) Sequence in CT was 15 mg/kg, lower than the upper range of 24 mg/kg in C-horizon soils overlying the same sequence in ME. In CT, U concentration means were significantly higher in C-horizon soils overlying Avalonian granites, and U concentrations ranged as high as 14 mg/kg, compared to those in C-horizon soil samples collected from other New England states, which ranged as high as 6.1 mg/kg in a sample in NH overlying the NH-ME Sequence. Element concentrations in C-horizon soils in CT were compared with those in samples collected from shallower depths. Concentrations of most major elements were highest in C-horizon soil samples, including Al, Ca, Fe, K, Na, and Ti, but element concentrations showed a relatively similar pattern in A-horizon and surficial soil samples among the underlying geologic provinces. Trace element concentrations, including Ba, W, Ga, Ni, Cs, Rb, Sr, Th, Sc, and U, also were higher in C-horizon soil samples than in overlying soil samples. Concentrations of Mg, and several trace elements, including Mn, P, As, Nb, Sn, Be, Bi, Hg, Se, Sb, La, Co, Cr, Pb, V, Y, Cu, Pb, and Zn were highest in some A-horizon or surficial soils, and indicate possible contributions from anthropogenic sources. Because element concentrations in soils above the C horizon are more likely to be affected by anthropogenic factors, concentration ranges in C-horizon soils and their spatially varying geologic associations should be considered when estimating background concentrations of elements in CT soils.

Identification and classification of structural soil conservation measures based on very high resolution stereo satellite data.

PubMed

Eckert, Sandra; Tesfay Ghebremicael, Selamawit; Hurni, Hans; Kohler, Thomas

2017-05-15

Land degradation affects large areas of land around the globe, with grave consequences for those living off the land. Major efforts are being made to implement soil and water conservation measures that counteract soil erosion and help secure vital ecosystem services. However, where and to what extent such measures have been implemented is often not well documented. Knowledge about this could help to identify areas where soil and water conservation measures are successfully supporting sustainable land management, as well as areas requiring urgent rehabilitation of conservation structures such as terraces and bunds. This study explores the potential of the latest satellite-based remote sensing technology for use in assessing and monitoring the extent of existing soil and water conservation structures. We used a set of very high resolution stereo Geoeye-1 satellite data, from which we derived a detailed digital surface model as well as a set of other spectral, terrain, texture, and filtered information layers. We developed and applied an object-based classification approach, working on two segmentation levels. On the coarser level, the aim was to delimit certain landscape zones. Information about these landscape zones is useful in distinguishing different types of soil and water conservation structures, as each zone contains certain specific types of structures. On the finer level, the goal was to extract and identify different types of linear soil and water conservation structures. The classification rules were based mainly on spectral, textural, shape, and topographic properties, and included object relationships. This approach enabled us to identify and separate from other classes the majority (78.5%) of terraces and bunds, as well as most hillside terraces (81.25%). Omission and commission errors are similar to those obtained by the few existing studies focusing on the same research objective but using different types of remotely sensed data. Based on our results, we estimate that the construction of the conservation structures in our study area in Eritrea required over 300,000 person-days of work, which underlines the huge efforts involved in soil and water conservation. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of soil type and rainfall intensity on sheet erosion processes and sediment characteristics along the climatic gradient in central-south China.

PubMed

Wu, Xinliang; Wei, Yujie; Wang, Junguang; Xia, Jinwen; Cai, Chongfa; Wei, Zhiyuan

2018-04-15

Soil erosion poses a major threat to the sustainability of natural ecosystems. The main objective of this study was to investigate the effects of soil type and rainfall intensity on sheet erosion processes (hydrological, erosional processes and sediment characteristics) from temperate to tropical climate. Field plot experiments were conducted under pre-wetted bare fallow condition for five soil types (two Luvisols, an Alisol, an Acrisol and a Ferralsol) with heavy textures (silty clay loam, silty clay and clay) derived separately from loess deposits, quaternary red clays and basalt in central-south China. Rainfall simulations were performed at two rainfall intensities (45 and 90mmh -1 ) and lasted one hour after runoff generation. Runoff coefficient, sediment concentration, sediment yield rate and sediment effective size distribution were determined at 3-min intervals. Runoff temporal variations were similar at the high rainfall intensity, but exhibited a remarkable difference at the low rainfall intensity among soil types except for tropical Ferralsol. Illite was positively correlated with runoff coefficient (p<0.05). Rainfall intensity significantly contributed to the erosional process (p<0.001). Sediment concentration and yield rate were the smallest for the tropical Ferralsol and sediment concentration was the largest for the temperate Luvisol. The regimes (transport and detachment) limiting erosion varied under the interaction of rainfall characteristics (intensity and duration) and soil types, with amorphous iron oxides and bulk density jointly enhancing soil resistance to erosive forces (Adj-R 2 >88%, p<0.001). Sediment size was dominated by <0.1mm size fraction for the Luvisols and bimodally distributed with the peaks at <0.1mm and 1-0.5mm size for the other soil types. Exchangeable sodium decreased sediment size while rainfall intensity and clay content increased it (Adj-R 2 =96%, p<0.01). These results allow to better understand the climate effect on erosion processes at the spatial-temporal scale from the perspective of soil properties. Copyright © 2017 Elsevier B.V. All rights reserved.

The influence of land use on the concentration and vertical distribution of PBDEs in soils of an e-waste recycling region of South China.

PubMed

Cheng, Zhineng; Wang, Yan; Wang, Shaorui; Luo, Chunling; Li, Jun; Chaemfa, Chakra; Jiang, Haoyu; Zhang, Gan

2014-08-01

The vertical distribution of polybrominated diphenyl ethers (PBDEs) in soil at four sites within an e-waste recycling region of South China was investigated. PBDE concentrations in soil ranged from 1.38 to 765 ng/g. There was a trend of decreasing PBDE concentration with soil depth, especially in the paddy field. However, high concentrations of BDE-209 were found in deeper soils indicating a highly preferential migration. There was a stronger correlation between PBDEs and total organic carbon (TOC), compared to dissolved organic carbon (DOC), which suggests that the association between non-dissolved organic carbon (NDOC) and PBDEs is stronger than for DOC. Different land use types, in particular differences in farming activities, significantly influenced the vertical distribution of PBDEs in soils. PBDEs displayed a higher leaching tendency in moist paddy soil than in drier soils. The frequent flooding condition in paddy field may facilitate the vertical transfer of PBDEs to the deeper soils. Copyright © 2014 Elsevier Ltd. All rights reserved.

Maize, switchgrass, and ponderosa pine biochar added to soil increased herbicide sorption and decreased herbicide efficacy.

PubMed

Clay, Sharon A; Krack, Kaitlynn K; Bruggeman, Stephanie A; Papiernik, Sharon; Schumacher, Thomas E

2016-08-02

Biochar, a by-product of pyrolysis made from a wide array of plant biomass when producing biofuels, is a proposed soil amendment to improve soil health. This study measured herbicide sorption and efficacy when soils were treated with low (1% w/w) or high (10% w/w) amounts of biochar manufactured from different feedstocks [maize (Zea mays) stover, switchgrass (Panicum vigatum), and ponderosa pine (Pinus ponderosa)], and treated with different post-processing techniques. Twenty-four hour batch equilibration measured sorption of (14)C-labelled atrazine or 2,4-D to two soil types with and without biochar amendments. Herbicide efficacy was measured with and without biochar using speed of seed germination tests of sensitive species. Biochar amended soils sorbed more herbicide than untreated soils, with major differences due to biochar application rate but minor differences due to biochar type or post-process handling technique. Biochar presence increased the speed of seed germination compared with herbicide alone addition. These data indicate that biochar addition to soil can increase herbicide sorption and reduce efficacy. Evaluation for site-specific biochar applications may be warranted to obtain maximal benefits without compromising other agronomic practices.

Hydrologic characterization of desert soils with varying degrees of pedogenesis: 2. Inverse modeling for eff ective properties

USGS Publications Warehouse

Mirus, B.B.; Perkins, K.S.; Nimmo, J.R.; Singha, K.

2009-01-01

To understand their relation to pedogenic development, soil hydraulic properties in the Mojave Desert were investi- gated for three deposit types: (i) recently deposited sediments in an active wash, (ii) a soil of early Holocene age, and (iii) a highly developed soil of late Pleistocene age. Eff ective parameter values were estimated for a simplifi ed model based on Richards' equation using a fl ow simulator (VS2D), an inverse algorithm (UCODE-2005), and matric pressure and water content data from three ponded infi ltration experiments. The inverse problem framework was designed to account for the eff ects of subsurface lateral spreading of infi ltrated water. Although none of the inverse problems converged on a unique, best-fi t parameter set, a minimum standard error of regression was reached for each deposit type. Parameter sets from the numerous inversions that reached the minimum error were used to develop probability distribu tions for each parameter and deposit type. Electrical resistance imaging obtained for two of the three infi ltration experiments was used to independently test fl ow model performance. Simulations for the active wash and Holocene soil successfully depicted the lateral and vertical fl uxes. Simulations of the more pedogenically developed Pleistocene soil did not adequately replicate the observed fl ow processes, which would require a more complex conceptual model to include smaller scale heterogeneities. The inverse-modeling results, however, indicate that with increasing age, the steep slope of the soil water retention curve shitis toward more negative matric pressures. Assigning eff ective soil hydraulic properties based on soil age provides a promising framework for future development of regional-scale models of soil moisture dynamics in arid environments for land-management applications. ?? Soil Science Society of America.

The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence.

PubMed

Mapelli, Francesca; Marasco, Ramona; Fusi, Marco; Scaglia, Barbara; Tsiamis, George; Rolli, Eleonora; Fodelianakis, Stilianos; Bourtzis, Kostas; Ventura, Stefano; Tambone, Fulvia; Adani, Fabrizio; Borin, Sara; Daffonchio, Daniele

2018-05-01

In mature soils, plant species and soil type determine the selection of root microbiota. Which of these two factors drives rhizosphere selection in barren substrates of developing desert soils has, however, not yet been established. Chronosequences of glacier forelands provide ideal natural environments to identify primary rhizosphere selection factors along the changing edaphic conditions of a developing soil. Here, we analyze changes in bacterial diversity in bulk soils and rhizospheres of a pioneer plant across a High Arctic glacier chronosequence. We show that the developmental stage of soil strongly modulates rhizosphere community assembly, even though plant-induced selection buffers the effect of changing edaphic factors. Bulk and rhizosphere soils host distinct bacterial communities that differentially vary along the chronosequence. Cation exchange capacity, exchangeable potassium, and metabolite concentration in the soil account for the rhizosphere bacterial diversity. Although the soil fraction (bulk soil and rhizosphere) explains up to 17.2% of the variation in bacterial microbiota, the soil developmental stage explains up to 47.7% of this variation. In addition, the operational taxonomic unit (OTU) co-occurrence network of the rhizosphere, whose complexity increases along the chronosequence, is loosely structured in barren compared with mature soils, corroborating our hypothesis that soil development tunes the rhizosphere effect.

Soil fertility and plant diversity enhance microbial performance in metal-polluted soils.

PubMed

Stefanowicz, Anna M; Kapusta, Paweł; Szarek-Łukaszewska, Grażyna; Grodzińska, Krystyna; Niklińska, Maria; Vogt, Rolf D

2012-11-15

This study examined the effects of soil physicochemical properties (including heavy metal pollution) and vegetation parameters on soil basal respiration, microbial biomass, and the activity and functional richness of culturable soil bacteria and fungi. In a zinc and lead mining area (S Poland), 49 sites were selected to represent all common plant communities and comprise the area's diverse soil types. Numerous variables describing habitat properties were reduced by PCA to 7 independent factors, mainly representing subsoil type (metal-rich mining waste vs. sand), soil fertility (exchangeable Ca, Mg and K, total C and N, organic C), plant species richness, phosphorus content, water-soluble heavy metals (Zn, Cd and Pb), clay content and plant functional diversity (based on graminoids, legumes and non-leguminous forbs). Multiple regression analysis including these factors explained much of the variation in most microbial parameters; in the case of microbial respiration and biomass, it was 86% and 71%, respectively. The activity of soil microbes was positively affected mainly by soil fertility and, apparently, by the presence of mining waste in the subsoil. The mining waste contained vast amounts of trace metals (total Zn, Cd and Pb), but it promoted microbial performance due to its inherently high content of macronutrients (total Ca, Mg, K and C). Plant species richness had a relatively strong positive effect on all microbial parameters, except for the fungal component. In contrast, plant functional diversity was practically negligible in its effect on microbes. Other explanatory variables had only a minor positive effect (clay content) or no significant influence (phosphorus content) on microbial communities. The main conclusion from this study is that high nutrient availability and plant species richness positively affected the soil microbes and that this apparently counteracted the toxic effects of metal contamination. Copyright © 2012 Elsevier B.V. All rights reserved.

Soil Bacterial Diversity Is Associated with Human Population Density in Urban Greenspaces.

PubMed

Wang, Haitao; Cheng, Minying; Dsouza, Melissa; Weisenhorn, Pamela; Zheng, Tianling; Gilbert, Jack A

2018-05-01

Urban greenspaces provide extensive ecosystem services, including pollutant remediation, water management, carbon maintenance, and nutrient cycling. However, while the urban soil microbiota underpin these services, we still have limited understanding of the factors that influence their distribution. We characterized soil bacterial communities from turf-grasses associated with urban parks, streets, and residential sites across a major urban environment, including a gradient of human population density. Bacterial diversity was significantly positively correlated with the population density; and species diversity was greater in park and street soils, compared to residential soils. Population density and greenspace type also led to significant differences in the microbial community composition that was also significantly correlated with soil pH, moisture, and texture. Co-occurrence network analysis revealed that microbial guilds in urban soils were well correlated. Abundant soil microbes in high density population areas had fewer interactions, while abundant bacteria in high moisture soils had more interactions. These results indicate the significant influence of changes in urban demographics and land-use on soil microbial communities. As urbanization is rapidly growing across the planet, it is important to improve our understanding of the consequences of urban zoning on the soil microbiota.

Results of the second national forest soil inventory in Germany - Interpretation of level and stock profiles for PCDD/F and PCB in terms of vegetation and humus type.

PubMed

Pandelova, Marchela; Henkelmann, Bernhard; Bussian, Bernd M; Schramm, Karl-Werner

2018-01-01

Polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs) and polychlorinated biphenyls (PCBs) were detected in 86 humic topsoil layers and in a subset of 11 randomly selected top mineral forest soils at the depths of 0-5cm and 5-10cm collected from different federal states of Germany. The distribution of these persistent organic pollutants (POPs) in humic topsoils with respect to vegetation cover (coniferous vs. deciduous vs. mixed), total organic carbon (TOC), altitude and latitude data was investigated. There is cross correlation between the contents and TOC while the correlation with latitude indicates higher abundances of POPs in central Germany where there is high population density accompanied with industrial activities. The calculated stocks suggest that humus type (mor, mull, or moder) in conjunction with forest type can explain the relative POPs abundances in different soil layers. Generally, humic topsoils show highest contents of POPs compare to the two mineral soils with a ratio of 100:10:1. However, the stock humic layers of coniferous stands contribute about 50% to the total stock, whereas at deciduous stands the stock is mainly located in the upper mineral soil layer (0-5cm). The soil-water distribution coefficients (Kd) were calculated to estimate the potential translocation in the different soil types. The Kd values vary among the PCBs and PCDD/Fs congeners and are most variable for humic topsoils. There is pronounced chemical abundance in the top mineral soils with increasing Kd and this points to non-water bound transport processes for superlipophilic compounds. Copyright © 2017 Elsevier B.V. All rights reserved.

Effect of formulation and repeated applications on the enantioselectivity of metalaxyl dissipation and leaching in soil.

PubMed

Celis, Rafael; Gámiz, Beatriz; Adelino, María A; Cornejo, Juan; Hermosín, María C

2015-11-01

Soil incubation and column leaching experiments were conducted to address the question of whether the type of formulation (unsupported versus clay supported) and repeated applications of the chiral fungicide (RS)-metalaxyl affected the enantioselectivity of its dissipation and leaching in a slightly alkaline, loamy sand agricultural soil. Regardless of the type of formulation and the number of fungicide applications, the R-enantiomer of metalaxyl was degraded faster than the S-enantiomer, but the individual degradation rates of R- and S-metalaxyl were highly affected by the different application regimes assayed (t1/2 = 2-104 days). Repeated applications accelerated the degradation of the biologically active R-metalaxyl enantiomer, whereas they led to slower degradation of the non-active S-metalaxyl enantiomer. The type of formulation had less influence on the dissipation rates of the enantiomers. For all formulations tested, soil column leachates became increasingly enriched in S-enantiomer as the number of fungicide applications was increased, and application of metalaxyl to soil columns as clay-based formulations reduced the leaching of both enantiomers. Pesticide application conditions can greatly influence the enantioselective dissipation of chiral pesticides in soil, and hence are expected to exert a great impact on both the biological efficacy and the environmental chiral signatures of pesticides applied as mixtures of enantiomers or racemates to agricultural soils. © 2014 Society of Chemical Industry.

The relationship between soil heterotrophic activity, soil dissolved organic carbon (DOC) leachate, and catchment-scale DOC export in headwater catchments

USGS Publications Warehouse

Brooks, P.D.; McKnight, Diane M.; Bencala, K.E.

1999-01-01

Dissolved organic carbon (DOC) from terrestrial sources forms the major component of the annual carbon budget in many headwater streams. In high-elevation catchments in the Rocky Mountains, DOC originates in the upper soil horizons and is flushed to the stream primarily during spring snowmelt. To identify controls on the size of the mobile soil DOC pool available to be transported during the annual melt event, we measured soil DOC production across a range of vegetation communities and soil types together with catchment DOC export in paired watersheds in Summit County, Colorado. Both surface water DOC concentrations and watershed DOC export were lower in areas where pyrite weathering resulted in lower soil pH. Similarly, the amount of DOC leached from organic soils was significantly smaller (p < 0.01) at sites having low soil pH. Scaling point source measurements of DOC production and leaching to the two basins and assuming only vegetated areas contribute to DOC production, we calculated that the amount of mobile DOC available to be leached to surface water during melt was 20.3 g C m−2 in the circumneutral basin and 17.8 g C m−2 in the catchment characterized by pyrite weathering. The significant (r2=0.91 and p < 0.05), linear relationship between over-winter CO2 flux and the amount of DOC leached from upper soil horizons during snowmelt suggests that the mechanism for the difference in production of mobile DOC was heterotrophic processing of soil carbon in snow-covered soil. Furthermore, this strong relationship between over-winter heterotrophic activity and the size of the mobile DOC pool present in a range of soil and vegetation types provides a likely mechanism for explaining the interannual variability of DOC export observed in high-elevation catchments.

Lithologic Distribution and Geologic History of the Apollo 17 Site: The Record in Soils and Small Rock Particles from the Highland Massifs

NASA Technical Reports Server (NTRS)

Jolliff, Bradley L.; Rockow, Kaylynn M.; Korotev, Randy L.; Haskin, Larry A.

1996-01-01

Through analysis by instrumental neutron activation (INAA) of 789 individual lithic fragments from the 2 mm-4 mm grain-size fractions of five Apollo 17 soil samples (72443, 72503, 73243, 76283, and 76503) and petrographic examination of a subset, we have determined the diversity and proportions of rock types recorded within soils from the highland massifs. The distribution of rock types at the site, as recorded by lithic fragments in the soils, is an alternative to the distribution inferred from the limited number of large rock samples. The compositions and proportions of 2 mm-4 mm fragments provide a bridge between compositions of less than 1 mm fines and types and proportions of rocks observed in large collected breccias and their clasts. The 2 mm-4 mm fraction of soil from South Massif, represented by an unbiased set of lithic fragments from station-2 samples 72443 and 72503, consists of 71% noritic impact-melt breccia, 7% Incompatible-Trace-Element-(ITE)-poor highland rock types (mainly granulitic breccias), 19% agglutinates and regolith breccias, 1% high-Ti mare basalt, and 2% others (very-low-Ti (VLT) basalt, monzogabbro breccia, and metal). In contrast, the 2 mm - 4 mm fraction of a soil from the North Massif, represented by an unbiased set of lithic fragments from station-6 sample 76503, has a greater proportion of ITE-poor highland rock types and mare-basalt fragments: it consists of 29% ITE-poor highland rock types (mainly granulitic breccias and troctolitic anorthosite), 25% impact-melt breccia, 13% high-Ti mare basalt, 31 % agglutinates and regolith breccias, 1% orange glass and related breccia, and 1% others. Based on a comparison of mass- weighted mean compositions of the lithic fragments with compositions of soil fines from all Apollo 17 highland stations, differences between the station-2 and station-6 samples are representative of differences between available samples from the two massifs. From the distribution of different rock types and their compositions, we conclude the following: (1) North-Massif and South-Massif soil samples differ significantly in types and proportions of ITE-poor highland components and ITE-rich impact-melt-breccia components. These differences reflect crudely layered massifs and known local geology. The greater percentage of impact-melt breccia in the South- Massif light-mantle soil stems from derivation of the light mantle from the top of the massif, which apparently is richer in noritic impact-melt breccia than are lower parts of the massifs. (2) At station 2, the 2 mm-4 mm grain-size fraction is enriched in impact-melt breccias compared to the less than 1 mm fraction, suggesting that the <1 mm fraction within the light mantle has a greater proportion of lithologies such as granulitic breccias which are more prevalent lower in the massifs and which we infer to be older (pre-basin) highland components. (3) Soil from station 6, North Massif, contains magnesian troctolitic anorthosite, which is a component that is rare in station-2 South-Massif,contains magnesian troctolitic in impact-melt breccia interpreted by most investigators to be ejecta from the Serenitatis basin.

Indirect Short- and Long-Term Effects of Aboveground Invertebrate and Vertebrate Herbivores on Soil Microarthropod Communities

PubMed Central

Vandegehuchte, Martijn L.; Raschein, Ursina; Schütz, Martin; Gwiazdowicz, Dariusz J.; Risch, Anita C.

2015-01-01

Recognition is growing that besides ungulates, small vertebrate and invertebrate herbivores are important drivers of grassland functioning. Even though soil microarthropods play key roles in several soil processes, effects of herbivores—especially those of smaller body size—on their communities are not well understood. Therefore, we progressively excluded large, medium and small vertebrate and invertebrate herbivores for three growing seasons using size-selective fences in two vegetation types in subalpine grasslands; short-grass and tall-grass vegetation generated by high and low historical levels of ungulate grazing. Herbivore exclusions generally had few effects on microarthropod communities, but exclusion of all herbivore groups resulted in decreased total springtail and Poduromorpha richness compared with exclusion of only ungulates and medium-sized mammals, regardless of vegetation type. The tall-grass vegetation had a higher total springtail richness and mesostigmatid mite abundance than the short-grass vegetation and a different oribatid mite community composition. Although several biotic and abiotic variables differed between the exclusion treatments and vegetation types, effects on soil microarthropods were best explained by differences in nutrient and fibre content of the previous year’s vegetation, a proxy for litter quality, and to a lesser extent soil temperature. After three growing seasons, smaller herbivores had a stronger impact on these functionally important soil microarthropod communities than large herbivores. Over longer time-scales, however, large grazers created two different vegetation types and thereby influenced microarthropod communities bottom-up, e.g. by altering resource quality. Hence, both short- and long-term consequences of herbivory affected the structure of the soil microarthropod community. PMID:25738942

An empirical model for the complex dielectric permittivity of soils as a function of water content

NASA Technical Reports Server (NTRS)

Wang, J. R.; Chmugge, T. J.

1978-01-01

The recent measurements on the dielectric properties of soils shows that the variation of dielectric constant with moisture content depends on soil types. The observed dielectric constant increases only slowly with moisture content up to a transition point. Beyond the transition it increases rapidly with moisture content. The moisture value of transition region was found to be higher for high clay content soils than for sandy soils. Many mixing formulas were compared with, and were found incompatible with, the measured dielectric variations of soil-water mixtures. A simple empirical model was proposed to describe the dielectric behavior of ths soil-water mixtures. The relationship between transition moisture and wilting point provides a means of estimating soil dielectric properties on the basis of texture information.

Spectral evidence for the mineralogy of high-albedo soils and dust on Mars

NASA Technical Reports Server (NTRS)

Singer, R. B.

1982-01-01

Laboratory spectroscopic observations are presented which further constrain the mineralogy and origin of the high albedo Martian soils and dust, and suggest that nontronite is not a major component of Martian soils, although the presence of other iron-poor clays cannot be excluded on the basis of current observational data. Because the best of the known spectral analogs for the high albedo Martian material is a type of palagonite from Hawaii, it is thought that ferric iron is likely to occur in poorly defined Martian crystallographic sites producing X-ray amorphous weathering products of mafic volcanic glass. These materials form slowly, under semiarid conditions, at ambient temperatures. Since the amorphous Hawaiian soils exist metastably for thousands of years, their Martian analogs may be expected to survive even longer under the present cold and dry climatic conditions.

Carbon storage in subalpine forests and meadows of the Olympic Mountains, Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

Prichard, S.J.; Peterson, D.L.

1995-06-01

We investigated carbon storage in high elevation ecosystems of the Olympic Mountains. A sharp precipitation gradient created by the Olympic mountain range allows for comparison of carbon storage in different climatic regimes and vegetation types. Carbon in soils, vegetation, and woody debris was examined in subalpine forests and meadows of the northeast (dry) and southwest (wet) Olympics. Soil carbon storage in high elevation sites appears to be considerably greater than most low elevation forests. Above-ground carbon storage is generally greater in southwest sites. Meadow soils contained high carbon concentrations in upper horizons, while forests also stored a substantial amount ofmore » carbon in lower horizons. Information gained from this study will provide a better understanding of soil-vegetation relationships in subalpine ecosystems, especially with respect to potential climatic change impacts.« less

Diversity among strains of Pseudomonas aeruginosa from manure and soil, evaluated by multiple locus variable number tandem repeat analysis and antibiotic resistance profiles.

PubMed

Youenou, Benjamin; Brothier, Elisabeth; Nazaret, Sylvie

2014-01-01

The results of a multiple locus variable number of tandem repeat (VNTR) analysis (MLVA)-based study designed to understand the genetic diversity of soil and manure-borne Pseudomonas aeruginosa isolates, and the relationship between these isolates and a set of clinical and environmental isolates, are hereby reported. Fifteen described VNTR markers were first selected, and 62 isolates recovered from agricultural and industrial soils in France and Burkina Faso, and from cattle and horse manure, along with 26 snake-related isolates and 17 environmental and clinical isolates from international collections, were genotyped. Following a comparison with previously published 9-marker MLVA schemes, an optimal 13-marker MLVA scheme (MLVA13-Lyon) was identified that was found to be the most efficient, as it showed high typability (90%) and high discriminatory power (0.987). A comparison of MLVA with PFGE for typing of the snake-related isolates confirmed the MLVA13-Lyon scheme to be a robust method for quickly discriminating and inferring genetic relatedness among environmental isolates. The 62 isolates displayed wide diversity, since 41 MLVA types (i.e. MTs) were observed, with 26 MTs clustered in 10 MLVA clonal complexes (MCs). Three and eight MCs were found among soil and manure isolates, respectively. Only one MC contained both soil and manure-borne isolates. No common MC was observed between soil and manure-borne isolates and the snake-related or environmental and clinical isolates. Antibiotic resistance profiles were performed to determine a potential link between resistance properties and the selective pressure that might be present in the various habitats. Except for four soil and manure isolates resistant to ticarcillin and ticarcillin/clavulanic acid and one isolate from a hydrocarbon-contaminated soil resistant to imipenem, all environmental isolates showed wild-type antibiotic profiles. Copyright © 2013 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Mapping the Spectral and Biochemical Characteristics of Riparian Vegetation and Soils

NASA Astrophysics Data System (ADS)

Balaji Bhaskar, M. S.

2016-12-01

Salt cedar (Tamarix ramosissima), an invasive plant species, has successfully invaded large extents of several riparian zones along the western United States and northern Mexico. Mapping the distribution and abundance of Tamarix over these large areas through a, multi-seasonal, cost-effective monitoring approach using satellite remote sensing is very essential. Hence, the objectives of this study are: 1) to identify the spectral characteristics of the major riparian, agricultural vegetation types and soils in the Lower Colorado River (LCR) region; and 2) to determine the biochemical characteristics of the vegetation and soils. Ground truth surveys were conducted at 79 locations where the spectral reflectance measurements of vegetation, type of plant species, plant heights, soil samples and GPS co-ordinates were recorded. All the sampling was designed to coincide with the satellite overpass period. From the LANDSAT TM image, dark-object-subtracted (DOS) digital number (DN) values of six LANDSAT single bands (1-5 and 7) were extracted and all the spectral ratios and vegetative indices were calculated. The NDVI, R1,5 and R1,7 were identified as the best ratios to distinguish the major vegetation types. The LANDSAT TM color-composite spectral ratio image (NDVI, R1,5 and R1,7 as GBR) can clearly identify and map the areas infested with Tamarix. The salt cedar infested riparian soils showed high concentrations of Ca, Mg and Na concentrations compared to other soils and the spectral reflectance of soils with high Na concentrations were significantly higher in the 350-2500 nm spectral range compared to other soils. The Leaf Area Index (LAI) data shows that the salt cedar has higher LAI compared to other riparian vegetation. The spectral and satellite image analysis shows that the selected spectral ratios can be applied to multiple satellite overpasses for monitoring the seasonal progression of the riparian growth over time. Extending the image analysis over wider areas of western United States can improve the understanding of the riparian dynamics in this region.

Soil Type Has a Stronger Role than Dipterocarp Host Species in Shaping the Ectomycorrhizal Fungal Community in a Bornean Lowland Tropical Rain Forest

PubMed Central

Essene, Adam L.; Shek, Katherine L.; Lewis, J. D.; Peay, Kabir G.; McGuire, Krista L.

2017-01-01

The role that mycorrhizal fungal associations play in the assembly of long-lived tree communities is poorly understood, especially in tropical forests, which have the highest tree diversity of any ecosystem. The lowland tropical rain forests of Southeast Asia are characterized by high levels of species richness within the family Dipterocarpaceae, the entirety of which has been shown to form obligate ectomycorrhizal (ECM) fungal associations. Differences in ECM assembly between co-occurring species of dipterocarp have been suggested, but never tested in adult trees, as a mechanism for maintaining the coexistence of closely related tree species in this family. Testing this hypothesis has proven difficult because the assembly of both dipterocarps and their ECM associates co-varies with the same edaphic variables. In this study, we used high-throughput DNA sequencing of soils and Sanger sequencing of root tips to evaluate how ECM fungi were structured within and across a clay–sand soil nutrient ecotone in a mixed-dipterocarp rain forest in Malaysian Borneo. We compared assembly patterns of ECM fungi in bulk soil to ECM root tips collected from three ecologically distinct species of dipterocarp. This design allowed us to test whether ECM fungi are more strongly structured by soil type or host specificity. As with previous studies of ECM fungi on this plot, we observed that clay vs. sand soil type strongly structured both the bulk soil and root tip ECM fungal communities. However, we also observed significantly different ECM communities associated with two of the three dipterocarp species evaluated on this plot. These results suggest that ECM fungal assembly on these species is shaped by a combination of biotic and abiotic factors, and that the soil edaphic niche occupied by different dipterocarp species may be mediated by distinct ECM fungal assemblages. PMID:29163567

Effects of biochar produced from different feedstocks on soil properties and sunflower growth

NASA Astrophysics Data System (ADS)

Alburquerque, J. A.; Calero, J. M.; Villar, R.; Barrón, V.; Torrent, J.; del Campillo, M. C.; Gallardo, A.

2012-04-01

The use of biochar obtained from biomass pyrolysis as a soil amendment has potential benefits, such as reduction in gas emissions, increase in soil carbon sequestration and improvements in soil fertility and crop yield. These constitute a great incentive for the implementation of biochar-based strategies, which could contribute to improvement of the sustainability of agricultural systems. However, to date, the results of research studies show great variability as a result of differences in both the raw materials and the pyrolysis conditions used to produce biochar, as well as in the experimental setting (crop, soil type, pedo-climatic conditions, etc.). The aim of this study was to evaluate the effects of five types of biochar produced from representative agricultural and forestry wastes (olive husk, almond shell, wheat straw, pine woodchips and olive tree prunings), and applied to soil at different rates, on soil properties and sunflower (Helianthus annuus L.) growth. The biochars had a high organic matter content, alkaline pH, variable soluble salt content and non-phytotoxic properties. The addition of biochar to soil increased pH, electrical conductivity and water retention capacity, and decreased soil bulk density compared to control (unamended soil). However, these effects differed depending on biochar type. In contrast, no consistent effects on sunflower growth variables were observed due to the addition of biochar: increases were observed in some variables (plant dry weight, leaf area and height), but these increases were, in general, not statistically significant when compared to the unamended soil. This can be explained by the nature of biochar, being rich in carbon but relatively poor in nutrients. In summary, our results indicate that biochar is capable of improving soil properties which can impact positively on soil-plant water relations, without negative effects on sunflower growth, and therefore it is suitable for use as a long-term carbon sink in agricultural soils, with both agricultural and environmental benefits.

Influence of indian mustard (Brassica juncea) on rhizosphere soil solution chemistry in long-term contaminated soils: a rhizobox study.

PubMed

Kim, Kwon-Rae; Owens, Gary; Kwon, Soon-lk

2010-01-01

This study investigated the influence of Indian mustard (Brassica juncea) root exudation on soil solution properties (pH, dissolved organic carbon (DOC), metal solubility) in the rhizosphere using a rhizobox. Measurement was conducted following the cultivation of Indian mustard in the rhizobox filled four different types of heavy metal contaminated soils (two alkaline soils and two acidic soils). The growth of Indian mustard resulted in a significant increase (by 0.6 pH units) in rhizosphere soil solution pH of acidic soils and only a slight increase (< 0.1 pH units) in alkaline soils. Furthermore, the DOC concentration increased by 17-156 mg/L in the rhizosphere regardless of soil type and the extent of contamination, demonstrating the exudation of DOC from root. Ion chromatographic determination showed a marked increase in the total dissolved organic acids (OAs) in rhizosphere. While root exudates were observed in all soils, the amount of DOC and OAs in soil solution varied considerably amongst different soils, resulting in significant changes to soil solution metals in the rhizosphere. For example, the soil solution Cd, Cu, Pb, and Zn concentrations increased in the rhizosphere of alkaline soils compared to bulk soil following plant cultivation. In contrast, the soluble concentrations of Cd, Pb, and Zn in acidic soils decreased in rhizosphere soil when compared to bulk soils. Besides the influence of pH and DOC on metal solubility, the increase of heavy metal concentration having high stability constant such as Cu and Pb resulted in a release of Cd and Zn from solid phase to liquid phase.

Bacterial phylogeny structures soil resistomes across habitats

PubMed Central

Forsberg, Kevin J.; Patel, Sanket; Gibson, Molly K.; Lauber, Christian L.; Knight, Rob; Fierer, Noah; Dantas, Gautam

2014-01-01

Summary Ancient and diverse antibiotic resistance genes (ARGs) have previously been identified from soil1–3, including genes identical to those in human pathogens4. Despite the apparent overlap between soil and clinical resistomes4–6, factors influencing ARG composition in soil and their movement between genomes and habitats remain largely unknown3. General metagenome functions often correlate with the underlying structure of bacterial communities7–12. However, ARGs are hypothesized to be highly mobile4,5,13, prompting speculation that resistomes may not correlate with phylogenetic signatures or ecological divisions13,14. To investigate these relationships, we performed functional metagenomic selections for resistance to 18 antibiotics from 18 agricultural and grassland soils. The 2895 ARGs we discovered were predominantly novel, and represent all major resistance mechanisms15. We demonstrate that distinct soil types harbor distinct resistomes, and that nitrogen fertilizer amendments strongly influenced soil ARG content. Resistome composition also correlated with microbial phylogenetic and taxonomic structure, both across and within soil types. Consistent with this strong correlation, mobility elements syntenic with ARGs were rare in soil compared to sequenced pathogens, suggesting that ARGs in the soil may not transfer between bacteria as readily as is observed in the clinic. Together, our results indicate that bacterial community composition is the primary determinant of soil ARG content, challenging previous hypotheses that horizontal gene transfer effectively decouples resistomes from phylogeny13,14. PMID:24847883

Bacterial phylogeny structures soil resistomes across habitats

NASA Astrophysics Data System (ADS)

Forsberg, Kevin J.; Patel, Sanket; Gibson, Molly K.; Lauber, Christian L.; Knight, Rob; Fierer, Noah; Dantas, Gautam

2014-05-01

Ancient and diverse antibiotic resistance genes (ARGs) have previously been identified from soil, including genes identical to those in human pathogens. Despite the apparent overlap between soil and clinical resistomes, factors influencing ARG composition in soil and their movement between genomes and habitats remain largely unknown. General metagenome functions often correlate with the underlying structure of bacterial communities. However, ARGs are proposed to be highly mobile, prompting speculation that resistomes may not correlate with phylogenetic signatures or ecological divisions. To investigate these relationships, we performed functional metagenomic selections for resistance to 18 antibiotics from 18 agricultural and grassland soils. The 2,895 ARGs we discovered were mostly new, and represent all major resistance mechanisms. We demonstrate that distinct soil types harbour distinct resistomes, and that the addition of nitrogen fertilizer strongly influenced soil ARG content. Resistome composition also correlated with microbial phylogenetic and taxonomic structure, both across and within soil types. Consistent with this strong correlation, mobility elements (genes responsible for horizontal gene transfer between bacteria such as transposases and integrases) syntenic with ARGs were rare in soil by comparison with sequenced pathogens, suggesting that ARGs may not transfer between soil bacteria as readily as is observed between human pathogens. Together, our results indicate that bacterial community composition is the primary determinant of soil ARG content, challenging previous hypotheses that horizontal gene transfer effectively decouples resistomes from phylogeny.

Single nucleotide polymorphism-based molecular typing of M. leprae from multicase families of leprosy patients and their surroundings to understand the transmission of leprosy.

PubMed

Turankar, R P; Lavania, M; Chaitanya, V S; Sengupta, U; Darlong, J; Darlong, F; Siva Sai, K S R; Jadhav, R S

2014-03-01

The exact mode of transmission of leprosy is not clearly understood; however, many studies have demonstrated active transmission of leprosy around a source case. Families of five active leprosy cases and their household contacts were chosen from a high endemic area in Purulia. Fifty-two soil samples were also collected from different areas of their houses. DNA was extracted from slit-skin smears (SSS) and soil samples and the Mycobacterium leprae-specific RLEP (129 bp) region was amplified using PCR. Molecular typing of M. leprae was performed for all RLEP PCR-positive samples by single nucleotide polymorphism (SNP) typing and confirmation by DNA sequencing. SSS of these five patients and six out of the total 28 contacts were PCR positive for RLEP whereas 17 soil samples out of 52 showed the presence of M. leprae DNA. SNP typing of M. leprae from all RLEP PCR-positive subjects (patients and smear-positive contacts) and 10 soil samples showed the SNP type 1 genotype. M. leprae DNA from the five leprosy patients and the six contacts was further subtyped and the D subtype was noted in all patients and contacts, except for one contact where the C subtype was identified. Typing followed by subtyping of M. leprae clearly revealed that either the contacts were infected by the patients or both patients and contacts had the same source of infection. It also revealed that the type of M. leprae in the soil in the inhabited areas where patients resided was also of the same type as that found in patients. © 2013 The Authors Clinical Microbiology and Infection © 2013 European Society of Clinical Microbiology and Infectious Diseases.

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers

PubMed Central

Bai, Ren; Wang, Jun-Tao; Deng, Ye; He, Ji-Zheng; Feng, Kai; Zhang, Li-Mei

2017-01-01

Paddy rice fields occupy broad agricultural area in China and cover diverse soil types. Microbial community in paddy soils is of great interest since many microorganisms are involved in soil functional processes. In the present study, Illumina Mi-Seq sequencing and functional gene array (GeoChip 4.2) techniques were combined to investigate soil microbial communities and functional gene patterns across the three soil types including an Inceptisol (Binhai), an Oxisol (Leizhou), and an Ultisol (Taoyuan) along four profile depths (up to 70 cm in depth) in mesocosm incubation columns. Detrended correspondence analysis revealed that distinctly differentiation in microbial community existed among soil types and profile depths, while the manifest variance in functional structure was only observed among soil types and two rice growth stages, but not across profile depths. Along the profile depth within each soil type, Acidobacteria, Chloroflexi, and Firmicutes increased whereas Cyanobacteria, β-proteobacteria, and Verrucomicrobia declined, suggesting their specific ecophysiological properties. Compared to bacterial community, the archaeal community showed a more contrasting pattern with the predominant groups within phyla Euryarchaeota, Thaumarchaeota, and Crenarchaeota largely varying among soil types and depths. Phylogenetic molecular ecological network (pMEN) analysis further indicated that the pattern of bacterial and archaeal communities interactions changed with soil depth and the highest modularity of microbial community occurred in top soils, implying a relatively higher system resistance to environmental change compared to communities in deeper soil layers. Meanwhile, microbial communities had higher connectivity in deeper soils in comparison with upper soils, suggesting less microbial interaction in surface soils. Structure equation models were developed and the models indicated that pH was the most representative characteristics of soil type and identified as the key driver in shaping both bacterial and archaeal community structure, but did not directly affect microbial functional structure. The distinctive pattern of microbial taxonomic and functional composition along soil profiles implied functional redundancy within these paddy soils. PMID:28611747

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers.

PubMed

Bai, Ren; Wang, Jun-Tao; Deng, Ye; He, Ji-Zheng; Feng, Kai; Zhang, Li-Mei

2017-01-01

Paddy rice fields occupy broad agricultural area in China and cover diverse soil types. Microbial community in paddy soils is of great interest since many microorganisms are involved in soil functional processes. In the present study, Illumina Mi-Seq sequencing and functional gene array (GeoChip 4.2) techniques were combined to investigate soil microbial communities and functional gene patterns across the three soil types including an Inceptisol (Binhai), an Oxisol (Leizhou), and an Ultisol (Taoyuan) along four profile depths (up to 70 cm in depth) in mesocosm incubation columns. Detrended correspondence analysis revealed that distinctly differentiation in microbial community existed among soil types and profile depths, while the manifest variance in functional structure was only observed among soil types and two rice growth stages, but not across profile depths. Along the profile depth within each soil type, Acidobacteria , Chloroflexi , and Firmicutes increased whereas Cyanobacteria , β -proteobacteria , and Verrucomicrobia declined, suggesting their specific ecophysiological properties. Compared to bacterial community, the archaeal community showed a more contrasting pattern with the predominant groups within phyla Euryarchaeota , Thaumarchaeota , and Crenarchaeota largely varying among soil types and depths. Phylogenetic molecular ecological network (pMEN) analysis further indicated that the pattern of bacterial and archaeal communities interactions changed with soil depth and the highest modularity of microbial community occurred in top soils, implying a relatively higher system resistance to environmental change compared to communities in deeper soil layers. Meanwhile, microbial communities had higher connectivity in deeper soils in comparison with upper soils, suggesting less microbial interaction in surface soils. Structure equation models were developed and the models indicated that pH was the most representative characteristics of soil type and identified as the key driver in shaping both bacterial and archaeal community structure, but did not directly affect microbial functional structure. The distinctive pattern of microbial taxonomic and functional composition along soil profiles implied functional redundancy within these paddy soils.

Altitudinal variation of soil organic carbon stocks in temperate forests of Kashmir Himalayas, India.

PubMed

Ahmad Dar, Javid; Somaiah, Sundarapandian

2015-02-01

Soil organic carbon stocks were measured at three depths (0-10, 10-20, and 20-30 cm) in seven altitudes dominated by different forest types viz. Populus deltoides, 1550-1800 m; Juglans regia, 1800-2000 m; Cedrus deodara, 2050-2300 m; Pinus wallichiana, 2000-2300 m; mixed type, 2200-2400 m; Abies pindrow, 2300-2800 m; and Betula utilis, 2800-3200 m in temperate mountains of Kashmir Himalayas. The mean range of soil organic carbon (SOC) stocks varied from 39.07 to 91.39 Mg C ha(-1) in J. regia and B. utilis forests at 0-30 cm depth, respectively. Among the forest types, the lowest mean range of SOC at three depths (0-10, 10-20, and 20-30 cm) was observed in J. regia (18.55, 11.31, and 8.91 Mg C ha(-1), respectively) forest type, and the highest was observed in B. utilis (54.10, 21.68, and 15.60 Mg C ha(-1), respectively) forest type. SOC stocks showed significantly (R (2) = 0.67, P = 0.001) an increasing trend with increase in altitude. On average, the percentages of SOC at 0-10-, 10-20-, and 20-30-cm depths were 53.2, 26.5, and 20.3 %, respectively. Bulk density increased significantly with increase in soil depth and decreased with increase in altitude. Our results suggest that SOC stocks in temperate forests of Kashmir Himalaya vary greatly with forest type and altitude. The present study reveals that SOC stocks increased with increase in altitude at high mountainous regions. Climate change in these high mountainous regions will alter the carbon sequestration potential, which would affect the global carbon cycle.

The influence of tree species composition on the storage and mobility of semivolatile organic compounds in forest soils.

PubMed

Komprdová, Klára; Komprda, Jiří; Menšík, Ladislav; Vaňková, Lenka; Kulhavý, Jiří; Nizzetto, Luca

2016-05-15

Soil contamination with PCBs and PAHs in adjacent forest plots, characterized by a distinct composition in tree species (spruce only, mixed and beech only), was analyzed to investigate the influence of ecosystem type on contaminant mobility in soil under very similar climate and exposure conditions. Physical-chemical properties and contaminant concentrations in litter (L), organic (F, H) and mineral (A, B) soil horizons were analyzed. Contaminant distribution in the soil core varied both in relation to forest type and contaminant group/properties. Contaminant mobility in soil was assessed by examining the ratios of total organic carbon (TOC)-standardized concentrations across soil horizons (Enrichment factors, EFTOC) and the relationship between EFTOC and the octanol-water equilibrium partitioning coefficient (KOW). Contaminant distribution appeared to be highly unsteady, with pedogenic/biogeochemical drivers controlling contaminant mobility in organic layers and leaching controlling accumulation in mineral layers. Lighter PCBs displayed higher mobility in all forest types primarily controlled by leaching and, to a minor extent, diffusion. Pedogenic processes controlling the formation of soil horizons were found to be crucial drivers of PAHs and heavier PCBs distribution. All contaminants appeared to be more mobile in the soil of the broadleaved plot, followed by mixed canopy and spruce forest. Increasing proportion of deciduous broadleaf species in the forest can thus lead to faster degradation or the faster leaching of PAHs and PCBs. The composition of humic substances was found to be a better descriptor of contaminant concentration than TOC. Copyright © 2016 Elsevier B.V. All rights reserved.

The effects of the African Green Revolution on nitrogen losses from two contrasting soil types in sub-Saharan Africa

NASA Astrophysics Data System (ADS)

Tully, K. L.; Russo, T.; Hickman, J. E.; Palm, C.

2013-12-01

Nearly 80% of countries in sub-Saharan Africa (SSA) face problems of nitrogen (N) scarcity, which together with poverty causes food insecurity and malnutrition. The Alliance for a Green Revolution in Africa has set a goal of increasing fertilizer use in the region six-fold by 2015. While there is substantial evidence that greater N fertilizer use will improve crop yields, it could lead to increased N leaching and elevated nitrate (NO3-) concentrations in surface water and groundwater reservoirs. However, it is unclear what the magnitude of impacts will be in SSA given historically low nutrient additions (of less than 5 kg N/ha/yr), highly degraded soils (due to years of nutrient and soil organic matter depletion), and a wide range of soil types on which increased fertilizer use is occurring. Current estimates of N dynamics and balances in SSA agriculture now rely on data from other regions with different soil types, soil fertility, and land management practices. To understand the influence of increased fertilizer use on water quality requires data from representative areas in SSA. Experimental maize plots were established in a randomized complete block design in both western Kenya (clayey soil) and mid-western Tanzania (sandy soil). Plots were amended with 0, 50, 75, and 200 kg N/ha/yr as mineral fertilizer. Tension lysimeters were installed at three depths in each treatment, and water was collected throughout the maize growing season. Soil water solutions were analyzed for NO3--N. Flow through the soil column at each soil depth, was modeled using VS2DT, a variably saturated flow and solute transport model, and water flux values were multiplied by measured NO3--N concentrations to estimate seasonal N leaching flux. Soil texture was a major driver of N losses, altering both the pathways and magnitude of losses. Clayey soils in western Kenya show an enormous potential for loss of NO3--N immediately following the onset of rains as they trigger high rates of N mineralization and nitrification in the topsoil (known as the 'birch effect'). We did not observe this pulse in the sandy soils of central Tanzania. However, NO3- N concentrations in leachate were three times lower at 200 cm in clayey soils compared to sandy soils as a result of higher anion exchange capacity in clays. We show that while clayey soils lose NO3--N in a large pulse at the onset of rains, sandy soils lose large quantities of NO3--N over the course of the maize growing season. Results from this study can help inform recommended N application rates in similar soils (tropical Ultisols and Oxisols), to optimize yields while minimizing N leaching losses.

The mesofauna in different types of soils under southern taiga spruce forests (Tver oblast)

NASA Astrophysics Data System (ADS)

Gryuntal, S. Yu.

2010-11-01

The soil mesofauna of the burozem, soddy pale-podzolic, and whitish-podzolic soils under three types of southern taiga spruce forests was studied. The mesofauna of all these soils turned out to be similar in terms of the Chilopoda, Staphylinidae (Coleoptera), and Rhagionidae (Diptera) numbers and their predominant concentration in the litter. The zoophages prevailed, and, among the saprophages, primary destroyers were predominant. However, some specific characteristics of the mesofauna in the soils studied were revealed. In the sequence burozem, soddy pale-podzolic, and whitish-podzolic soils, the number of earthworms significantly decreased, while, in the sequence soddy pale-podzolic, burozem, and whitish-podzolic soils, the number of Diplopoda representatives and calciphilic forms became lower and was directly related to the diversity of the deciduous tree species and to the presence of the calcareous moraine close to the surface. In addition, some species can be indicators of particular soil properties. The presence of the road beetle Quedius fuliginosus indicated the elevated moisture of the soils, that of Philonthus decorus pointed to the high humus content, and the presence of the road beetle Tachinus marginellus showed the low acidity of the humus. The low number or the absence of the earthworms Octolasium lacteum and Dendrodril us rubidus f. tenuis indicated higher humus acidity.

Case study of microarthropod communities to assess soil quality in different managed vineyards

NASA Astrophysics Data System (ADS)

Gagnarli, E.; Goggioli, D.; Tarchi, F.; Guidi, S.; Nannelli, R.; Vignozzi, N.; Valboa, G.; Lottero, M. R.; Corino, L.; Simoni, S.

2015-07-01

Land use influences the abundance and diversity of soil arthropods. The evaluation of the impact of different management strategies on soil quality is increasingly sought, and the determination of community structures of edaphic fauna can represent an efficient tool. In the area of Langhe (Piedmont, Italy), eight vineyards characterized for physical and chemical properties (soil texture, soil pH, total organic carbon, total nitrogen, calcium carbonate) were selected. We evaluated the effect of two types of crop management, organic and integrated pest management (IPM), on abundance and biodiversity of microarthropods living at the soil surface. Soil sampling was carried out in winter 2011 and spring 2012. All specimens were counted and determined up to the order level. The biodiversity analysis was performed using ecological indexes (taxa richness, dominance, Shannon-Wiener, Buzas and Gibson's evenness, Margalef, equitability, Berger-Parker), and the biological soil quality was assessed with the BSQ-ar index. The mesofauna abundance was affected by both the type of management and sampling time. On the whole, a higher abundance was in organic vineyards (N = 1981) than in IPM ones (N = 1062). The analysis performed by ecological indexes showed quite a high level of biodiversity in this environment, particularly in May 2012. Furthermore, the BSQ-ar values registered were similar to those obtained in preserved soils.

Antibiotics degradation in soil: A case of clindamycin, trimethoprim, sulfamethoxazole and their transformation products.

PubMed

Koba, Olga; Golovko, Oksana; Kodešová, Radka; Fér, Miroslav; Grabic, Roman

2017-01-01

Twelve different soil types that represent the soil compartments of the Czech Republic were fortified with three antibiotics (clindamycin (CLI), sulfamethoxazole (SUL), and trimethoprim (TRI)) to investigate their fate. Five metabolites (clindamycin sulfoxide (CSO), hydroxy clindamycin sulfoxide (HCSO), S-(SDC) and N-demethyl clindamycin (NDC), N 4 -acetyl sulfamethoxazole (N 4 AS), and hydroxy trimethoprim (HTR)) were detected and identified using HPLC/HRMS and HRPS in the soil matrix in this study. The identities of CSO and N 4 AS were confirmed using commercially available reference standards. The parent compounds degraded in all soils. Almost all of the metabolites have been shown to be persistent in soils, with the exception of N 4 AS, which was formed and degraded completely within 23 days of exposure. The rate of degradation mainly depended on the soil properties. The PCA results showed a high dependence between the soil type and behaviour of the pharmaceutical metabolites. The mentioned metabolites can be formed in soils, and the most persistent ones may be transported to the ground water and environmental water bodies. Because no information on the effects of those metabolites on living organism are available, more studies should be performed in the future to predict the risk to the environment. Copyright © 2016 Elsevier Ltd. All rights reserved.

A Methodology for Soil Moisture Retrieval from Land Surface Temperature, Vegetation Index, Topography and Soil Type

NASA Astrophysics Data System (ADS)

Pradhan, N. R.

2015-12-01

Soil moisture conditions have an impact upon hydrological processes, biological and biogeochemical processes, eco-hydrology, floods and droughts due to changing climate, near-surface atmospheric conditions and the partition of incoming solar and long-wave radiation between sensible and latent heat fluxes. Hence, soil moisture conditions virtually effect on all aspects of engineering / military engineering activities such as operational mobility, detection of landmines and unexploded ordinance, natural material penetration/excavation, peaking factor analysis in dam design etc. Like other natural systems, soil moisture pattern can vary from completely disorganized (disordered, random) to highly organized. To understand this varying soil moisture pattern, this research utilized topographic wetness index from digital elevation models (DEM) along with vegetation index from remotely sensed measurements in red and near-infrared bands, as well as land surface temperature (LST) in the thermal infrared bands. This research developed a methodology to relate a combined index from DEM, LST and vegetation index with the physical soil moisture properties of soil types and the degree of saturation. The advantage in using this relationship is twofold: first it retrieves soil moisture content at the scale of soil data resolution even though the derived indexes are in a coarse resolution, and secondly the derived soil moisture distribution represents both organized and disorganized patterns of actual soil moisture. The derived soil moisture is used in driving the hydrological model simulations of runoff, sediment and nutrients.

Soil type-depending effect of paddy management: composition and distribution of soil organic matter

NASA Astrophysics Data System (ADS)

Urbanski, Livia; Kölbl, Angelika; Lehndorff, Eva; Houtermans, Miriam; Schad, Peter; Zhang, Gang-Lin; Rahayu Utami, Sri; Kögel-Knabner, Ingrid

2016-04-01

Paddy soil management is assumed to promote soil organic matter accumulation and specifically lignin caused by the resistance of the aromatic lignin structure against biodegradation under anaerobic conditions during inundation of paddy fields. The present study investigates the effect of paddy soil management on soil organic matter composition compared to agricultural soils which are not used for rice production (non-paddy soils). A variety of major soil types, were chosen in Indonesia (Java), including Alisol, Andosol and Vertisol sites (humid tropical climate of Java, Indonesia) and in China Alisol sites (humid subtropical climate, Nanjing). This soils are typically used for rice cultivation and represent a large range of soil properties to be expected in Asian paddy fields. All topsoils were analysed for their soil organic matter composition by solid-state 13C nuclear magnetic resonance spectroscopy and lignin-derived phenols by CuO oxidation method. The soil organic matter composition, revealed by solid-state 13C nuclear magnetic resonance, was similar for the above named different parent soil types (non-paddy soils) and was also not affected by the specific paddy soil management. The contribution of lignin-related carbon groups to total SOM was similar in the investigated paddy and non-paddy soils. A significant proportion of the total aromatic carbon in some paddy and non-paddy soils was attributed to the application of charcoal as a common management practise. The extraction of lignin-derived phenols revealed low VSC (vanillyl, syringyl, cinnamyl) values for all investigated soils, being typical for agricultural soils. An inherent accumulation of lignin-derived phenols due to paddy management was not found. Lignin-derived phenols seem to be soil type-dependent, shown by different VSC concentrations between the parent soil types. The specific paddy management only affects the lignin-derived phenols in Andosol-derived paddy soils which are characterized by significantly higher VSC values compared to their parent soil types. However, the higher organic carbon concentrations in Andosol and Alisol (China)-derived paddy soils compared to their parent soil types, could not be explained by an enrichment of lignin-derived phenols. It seems that site specific incorporation of crop residues and properties of the parent soil types are likely more important for organic carbon contents and soil organic matter composition than the effect of paddy management itself.

Impact of two different types of grassland-to-cropland-conversion on dynamics of soil organic matter mineralization and N2O emission

NASA Astrophysics Data System (ADS)

Roth, G.; Flessa, H.; Helfrich, M.; Well, R.

2012-04-01

Conversion of grassland to arable land often causes a decrease of soil organic matter stocks and it increases nitrate leaching and the emission of the greenhouse gases CO2 and N2O. Conversion methods which minimize the mechanical impact on the surface soil may reduce mineralization rates and greenhouse gas emissions. We determined the effect of two different types of grassland to maize conversion (a) plowing of the sward followed by seeding of maize and (b) chemical killing of the sward by glyphosate followed by direct seed of maize) on the mineralization of grassland derived organic matter, the release of nitrate and the emission of N2O. The field experiment was carried out at the research station Kleve which is located in North Rhine-Westphalia, Germany. A four times replicated plot experiment with the following treatments was set up in April 2010: (i) mechanical conversion of grassland to maize (ii) chemical conversion grassland to maize and (iii) continuous grassland as reference. Nitrogen fertilization was 137 kg N ha-1 for maize and 250 kg N ha-1 for grassland. Soil respiration and emission of N2O were measured weekly for one year using manual closed chambers and gas chromatography. Emission of CO2 from mineralization of grassland-derived organic matter was determined from the δ13C signature of soil respiration. Soil respiration was mainly fueled by mineralization of grassland-derived organic carbon. There was no effect of the type of grassland conversion on total mineralization of organic matter originating from grassland. Both grassland to maize conversion treatments exhibited very high soil nitrate concentrations one year after grassland conversion (about 250 kg NO3-N in 0 - 90 cm). Total N2O emission decreased in the order chemical conversion of grassland (25.5) > mechanical conversion of grassland (20.1) > permanent grassland (10.8). Emissions were highest after harvest of maize when soil moisture increased. The results show that both types of grassland-to-maize conversion resulted in a large surplus of soil nitrate which promotes nitrate leaching to the groundwater and indirect N2O emissions. In addition, it caused high direct N2O emissions. We found no evidence that grassland conversion without mechanical plowing is an option to reduce groundwater contamination and greenhouse gas emission to the atmosphere.

Magnetic properties of soils in boreal regions. Case study from Ukraine

NASA Astrophysics Data System (ADS)

Menshov, Oleksandr; Kruglov, Oleksandr; Sukhorada, Anatoliy

2014-05-01

The investigation of soil magnetism is a part of the general soil researching for solving soil science and agronomy tasks. Soils are rather magnetic and sometimes they are the main near-surface object, which generates local magnetic anomalies. Soils have been studied within the main soil-climatic zones of Ukraine: Polesie, Forest Steppe, Steppe, Dry Steppe, Crimean and Carpathian mountains. The investigated soils types are: soddy-podsolic, gray forest, chestnut, chernozems leached, typical, ordinary, southern, and meadow, turf, bog soils, brawn and mountains soils. A part of Ukraine soils are from boreal regions. Among them are chernozems of Polesie soil-climatic zone. This territory was under influence of ice age. Another part of Ukraine boreal region is Carpathian maintains with special type of climate, landscapes and soils. The comprehensive analyze of Ukraine soils from the boreal territories and other parts is presented. Soil magnetism increases from North to South in the transition between the soil-climatic zones of Ukraine. The most magnetic are ordinary and south chernozems. The least magnetic are soddy-podzolic, meadaw and bog soils. The maximal values of the magnetic parameters are fixed in the watersheds, plateaus of the landscapes, minimal values are fixed in the floods, ravines, bor terraces. Magnetic susceptibility mapping is useful for agricultural mapping of lands, investigation of erosion, soil fertility, the necessity for mineral and organic fertilizers. Magnetic methods of investigations are high speed, effective and low-cost. Moreover, the magnetic methods a very important if the dangerous soil processes could not be fixed with visual image. In the same time, these hazards effect on the conditioning and the productivity of agricultural land. We have marked the decreasing of the magnetic susceptibility values within the risk of erosion sections of the catena.

The effect of moisture content on the thermal conductivity of moss and organic soil horizons from black spruce ecosystems in interior alaska

USGS Publications Warehouse

O'Donnell, J. A.; Romanovsky, V.E.; Harden, J.W.; McGuire, A.D.

2009-01-01

Organic soil horizons function as important controls on the thermal state of near-surface soil and permafrost in high-latitude ecosystems. The thermal conductivity of organic horizons is typically lower than mineral soils and is closely linked to moisture content, bulk density, and water phase. In this study, we examined the relationship between thermal conductivity and soil moisture for different moss and organic horizon types in black spruce ecosystems of interior Alaska. We sampled organic horizons from feather moss-dominated and Sphagnum-dominated stands and divided horizons into live moss and fibrous and amorphous organic matter. Thermal conductivity measurements were made across a range of moisture contents using the transient line heat source method. Our findings indicate a strong positive and linear relationship between thawed thermal conductivity (Kt) and volumetric water content. We observed similar regression parameters (?? or slope) across moss types and organic horizons types and small differences in ??0 (y intercept) across organic horizon types. Live Sphagnum spp. had a higher range of Kt than did live feather moss because of the field capacity (laboratory based) of live Sphagnum spp. In northern regions, the thermal properties of organic soil horizons play a critical role in mediating the effects of climate warming on permafrost conditions. Findings from this study could improve model parameterization of thermal properties in organic horizons and enhance our understanding of future permafrost and ecosystem dynamics. ?? 2009 by Lippincott Williams & Wilkins, Inc.

Bioremediation of Petroleum Hydrocarbon Contaminated Sites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fallgren, Paul

Bioremediation has been widely applied in the restoration of petroleum hydrocarbon-contaminated. Parameters that may affect the rate and efficiency of biodegradation include temperature, moisture, salinity, nutrient availability, microbial species, and type and concentration of contaminants. Other factors can also affect the success of the bioremediation treatment of contaminants, such as climatic conditions, soil type, soil permeability, contaminant distribution and concentration, and drainage. Western Research Institute in conjunction with TechLink Environmental, Inc. and the U.S. Department of Energy conducted laboratory studies to evaluate major parameters that contribute to the bioremediation of petroleum-contaminated drill cuttings using land farming and to develop amore » biotreatment cell to expedite biodegradation of hydrocarbons. Physical characteristics such as soil texture, hydraulic conductivity, and water retention were determined for the petroleum hydrocarbon contaminated soil. Soil texture was determined to be loamy sand to sand, and high hydraulic conductivity and low water retention was observed. Temperature appeared to have the greatest influence on biodegradation rates where high temperatures (>50 C) favored biodegradation. High nitrogen content in the form of ammonium enhanced biodegradation as well did the presence of water near field water holding capacity. Urea was not a good source of nitrogen and has detrimental effects for bioremediation for this site soil. Artificial sea water had little effect on biodegradation rates, but biodegradation rates decreased after increasing the concentrations of salts. Biotreatment cell (biocell) tests demonstrated hydrocarbon biodegradation can be enhanced substantially when utilizing a leachate recirculation design where a 72% reduction of hydrocarbon concentration was observed with a 72-h period at a treatment temperature of 50 C. Overall, this study demonstrates the investigation of the effects of environmental parameters on bioremediation is important in designing a bioremediation system to reduce petroleum hydrocarbon concentrations in impacted soils.« less

How to Plant Apple Trees to Reduce Replant Disease in Apple Orchard: A Study on the Phenolic Acid of the Replanted Apple Orchard

PubMed Central

Yin, Chengmiao; Xiang, Li; Wang, Gongshuai; Wang, Yanfang; Shen, Xiang; Chen, Xuesen; Mao, Zhiquan

2016-01-01

Apple replant disease (ARD) is an important problem in the production of apple. The phenolic acid is one of the causes of ARD. How phenolic acid affects the ARD was not well known. In this study, we analyzed the type, concentration and annual dynamic variation of phenolic acid in soil from three replanted apple orchards using an accelerated solvent extraction system with high performance liquid chromatography (ASE-HPLC). We found that the type and concentration of phenolic acid were significantly differed among different seasons, different sampling positions and different soil layers. Major types of phenolic acid in three replanted apple orchards were phlorizin, benzoic acid and vanillic aldehyde. The concentration of phenolic acid was highest in the soil of the previous tree holes and it was increased from the spring to autumn. Moreover, phenolic acid was primarily distributed in 30–60 cm soil layer in the autumn, while it was most abundant in 0–30 cm soil layer in the spring. Our results suggest that phlorizin, benzoic acid and vanillic aldehyde may be the key phenolic acid that brought about ARD in the replanted apple orchard. PMID:27907081

Land-use change and soil type are drivers of fungal and archaeal communities in the Pampa biome.

PubMed

Lupatini, Manoeli; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Suleiman, Afnan Khalil Ahmad; Fulthorpe, Roberta R; Roesch, Luiz Fernando Würdig

2013-02-01

The current study aimed to test the hypothesis that both land-use change and soil type are responsible for the major changes in the fungal and archaeal community structure and functioning of the soil microbial community in Brazilian Pampa biome. Soil samples were collected at sites with different land-uses (native grassland, native forest, Eucalyptus and Acacia plantation, soybean and watermelon field) and in a typical toposequence in Pampa biome formed by Paleudult, Albaqualf and alluvial soils. The structure of soil microbial community (archaeal and fungal) was evaluated by ribosomal intergenic spacer analysis and soil functional capabilities were measured by microbial biomass carbon and metabolic quotient. We detected different patterns in microbial community driven by land-use change and soil type, showing that both factors are significant drivers of fungal and archaeal community structure and biomass and microbial activity. Fungal community structure was more affected by land-use and archaeal community was more affected by soil type. Irrespective of the land-use or soil type, a large percentage of operational taxonomic unit were shared among the soils. We accepted the hypothesis that both land-use change and soil type are drivers of archaeal and fungal community structure and soil functional capabilities. Moreover, we also suggest the existence of a soil microbial core.

Micromorphological characteristics of sandy forest soils recently impacted by wildfires in Russia

NASA Astrophysics Data System (ADS)

Maksimova, Ekaterina; Abakumov, Evgeny

2017-04-01

Two fire-affected soils were studied using micromorphological methods. The objective of the paper is to assess and compare fire effects on the micropedological organisation of soils in a forest-steppe zone of central Russia (Volga Basin, Togliatti city). Samples were collected in the green zone of Togliatti city. The results showed that both soils were rich in quartz and feldspar. Mica was highly present in soils affected by surface fires, while calcium carbonates were identified in the soils affected by crown fires. The type of plasma is humus-clay, but the soil assemblage is plasma-silt with a prevalence of silt. Angular and subangular grains are the most dominant soil particulates. No evidence of intensive weathering was detected. There was a decrease in the porosity of soils affected by fires as a consequence of soil pores filled with ash and charcoal.

Use of thermal inertia determined by HCMM to predict nocturnal cold prone areas in Florida

NASA Technical Reports Server (NTRS)

Allen, L. H., Jr. (Principal Investigator)

1983-01-01

Pairs of HCMM day-night thermal infrared (IR) data were selected during the 1978-79 winter to examine patterns of surface temperature and thermal inertia (TI) of peninsular Florida. The GOES and NOAA-6 thermal IR, as well as National Climatic Center temperatures and rainfall, were also used. The HCMM apparent thermal inertia (ATI) images closely corresponded to the general soil map of Florida, based on soil drainage classes. Areas with low ATI overlay well-drained soils, such as deep sands and drained organic soils, whereas with high ATI overlay areas with wetlands and bodies of water. The HCMM ATI images also corresponded well with GOES-detected winter nocturnal cold-prone areas. Use of HCMM data with Carlson's energy balance model showed both high moisture availability (MA) and high thermal inertia (TI) of wetland-type surfaces and low MA and low TI of upland, well-drained soils. Since soil areas with low TI develop higher temperatures during the day, then antecedent patterns of highest maximum daytime surface temperature can also be used to predict nocturnal cold-prone areas in Florida.

Verification and completion of a soil data base for process based erosion model applications in Mato Grosso/Brazil

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Schultze, Nico; Schönke, Daniela; Amorim, Ricardo S. S.; Schmidt, Jürgen

2014-05-01

The study area of central Mato Grosso is subjected to severe soil erosion. Continuous erosion leads to massive losses of top soil and related organic carbon. Consequently agricultural soil soils suffer a drop in soil fertility which only can be balanced by mineral fertilization. In order to control soil degradation and organic carbon losses of Mato Grosso cropland soils a process based soil loss and deposition model is used. Applying the model it will be possible to: - identify the main areas affected by soil erosion or deposition in different scales under present and future climate and socio-economic conditions - estimate the related nutrient and organic carbon losses/yields - figure out site-related causes of soil mobilization/deposition - locate sediment and sediment related nutrient and organic matter pass over points into surface water bodies - estimate the impacts of climate and land use changes on the losses of top soil, sediment bound nutrients and organic carbon. Model input parameters include digital elevation data, precipitation characteristics and standard soil properties as particle size distribution, total organic carbon (TOC) and bulk density. The effects of different types of land use and agricultural management practices are accounted for by varying site-specific parameters predominantly related to soil surface properties such as erosional resistance, hydraulic roughness and percentage ground cover. In this context the existing EROSION 3D soil parameter data base deducted from large scale rainfall simulations in Germany is verified for application in the study area, using small scale disc type rainfall simulator with an additional runoff reflux approach. Thus it's possible to enlarge virtual plot length up to at least 10 m. Experimental plots are located in Cuiabá region of central Mato Grosso in order to cover the most relevant land use variants and tillage practices in the region. Results show that derived model parameters are highly influenced by soil management. This indicates a high importance of tillage impact on resistance to erosion, mulch cover and TOC. The measured parameter ranges can generally be confirmed by the existing data base, which only need to be completed due to changed phenological stages in Mato Grosso compared to German conditions.

Effect of soil properties on Hydraulic characteristics under subsurface drip irrigation

NASA Astrophysics Data System (ADS)

Fan, Wangtao; Li, Gang

2018-02-01

Subsurface drip irrigation (SDI) is a technique that has a high potential in application because of its high efficiency in water-saving. The hydraulic characteristics of SDI sub-unit pipe network can be affected by soil physical properties as the emitters are buried in soils. The related research, however, is not fully explored. The laboratory tests were carried out in the present study to determine the effects of hydraulic factors including operating pressure, initial soil water content, and bulk density on flow rate and its sensitivity to each hydraulic factor for two types of SDI emitters (PLASSIM emitter and Heping emitter). For this purpose, three soils with contrasting textures (i.e., light sand, silt loam, and light clay) were repacked with two soil bulk density (1.25 and1.40 g cm-3) with two initial soil water content (12% and 18%) in plexiglass columns with 40 cm in diameter and 40 cm in height. Drip emitters were buried at depth of 20 cm to measure the flow rates under seven operating pressures (60, 100, 150, 200, 250, 300, and 370 kPa). We found that the operating pressure was the dominating factor of flow rate of the SDI emitter, and flow rate increased with the increase of operating pressure. The initial soil water content and bulk density also affected the flow rate, and their effects were the most notable in the light sand soil. The sensitivity of flow rate to each hydraulic factor was dependent on soil texture, and followed a descending order of light sand>silt loam>light clay for both types of emitters. Further, the sensitivity of flow rate to each hydraulic factor decreased with the increase of operating pressure, initial soil water content, and bulk density. This study may be used to guide the soil specific-design of SDI emitters for optimal water use and management.

A Conformal, Fully-Conservative Approach for Predicting Blast Effects on Ground Vehicles

DTIC Science & Technology

2014-02-09

hydrocode. Again, a very detailed model of the pick-up truck was used. The results demonstrated that the soil type and moisture content affect both...dynamics code with the capability to model soil and blast using a multi- species formulation with advanced equations of state. The two-way coupling...of the blast, the effects of soil , which could have a high water content, must also be included. An attractive strategy, which is much less costly

Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest

PubMed Central

Kivlin, Stephanie N; Hawkes, Christine V

2016-01-01

The high diversity of tree species has traditionally been considered an important controller of belowground processes in tropical rainforests. However, soil water availability and resources are also primary regulators of soil bacteria in many ecosystems. Separating the effects of these biotic and abiotic factors in the tropics is challenging because of their high spatial and temporal heterogeneity. To determine the drivers of tropical soil bacteria, we examined tree species effects using experimental tree monocultures and secondary forests at La Selva Biological Station in Costa Rica. A randomized block design captured spatial variation and we sampled at four dates across two years to assess temporal variation. We measured bacteria richness, phylogenetic diversity, community composition, biomass, and functional potential. All bacteria parameters varied significantly across dates. In addition, bacteria richness and phylogenetic diversity were affected by the interaction of vegetation type and date, whereas bacteria community composition was affected by the interaction of vegetation type and block. Shifts in bacteria community richness and composition were unrelated to shifts in enzyme function, suggesting physiological overlap among taxa. Based on the observed temporal and spatial heterogeneity, our understanding of tropical soil bacteria will benefit from additional work to determine the optimal temporal and spatial scales for sampling. Understanding spatial and temporal variation will facilitate prediction of how tropical soil microbes will respond to future environmental change. PMID:27391450

Temporal and Spatial Variation of Soil Bacteria Richness, Composition, and Function in a Neotropical Rainforest.

PubMed

Kivlin, Stephanie N; Hawkes, Christine V

2016-01-01

The high diversity of tree species has traditionally been considered an important controller of belowground processes in tropical rainforests. However, soil water availability and resources are also primary regulators of soil bacteria in many ecosystems. Separating the effects of these biotic and abiotic factors in the tropics is challenging because of their high spatial and temporal heterogeneity. To determine the drivers of tropical soil bacteria, we examined tree species effects using experimental tree monocultures and secondary forests at La Selva Biological Station in Costa Rica. A randomized block design captured spatial variation and we sampled at four dates across two years to assess temporal variation. We measured bacteria richness, phylogenetic diversity, community composition, biomass, and functional potential. All bacteria parameters varied significantly across dates. In addition, bacteria richness and phylogenetic diversity were affected by the interaction of vegetation type and date, whereas bacteria community composition was affected by the interaction of vegetation type and block. Shifts in bacteria community richness and composition were unrelated to shifts in enzyme function, suggesting physiological overlap among taxa. Based on the observed temporal and spatial heterogeneity, our understanding of tropical soil bacteria will benefit from additional work to determine the optimal temporal and spatial scales for sampling. Understanding spatial and temporal variation will facilitate prediction of how tropical soil microbes will respond to future environmental change.

Electrical resistivity surveys to understand vegetation-water interlinkages in a northern latitude headwater catchment

NASA Astrophysics Data System (ADS)

Soulsby, C.; Dick, J.; Tetzlaff, D.; Bradford, J.

2016-12-01

The role of vegetation on the partitioning of precipitation, and the subsequent storage and release of water within the landscape is poorly understood. In particular, the relationship between vegetation and soil moisture is complex and reciprocal. The role of soil moisture as the primary source of water to plants may affect vegetation distribution. In turn, the structure of vegetation canopies may regulate water partitioning into interception, throughfall and steam flow. Such spatial differences in the inputs, together with complex patterns of water uptake from highly distributed root networks can create marked heterogeneity in soil moisture dynamics at small scales. Here, we present a study combining 3D and 2D ERT surveys with soil moisture measurements in a 3.2km upland catchment in the Scottish Highlands to understand influences of different vegetation types on spatio-temporal dynamics in soil moisture. The study focussed on one year of fortnightly ERT surveys to investigate plant-soil-water interactions within the root zone in podzolic soils. Locations were selected in both forest stands of 15m high Scots pine (Pinus sylvestris) and non-forest locations dominated by heather (Calluna vulgaris) shrubs (<0.5m high). These dominant species are typical of forest and non-forest vegetation communities in the Scottish Highlands. Results showed differences in the soil moisture dynamics under the different vegetation types, with heterogeneous patterns in the forested site mainly correlated with canopy cover and mirroring interception losses, with pronounced wetting cycles of the soil surrounding the bole of trees as a consequence of stem flow. Temporal variability in the forested site was greater, probably due to the interception, and increased evapotranspiration losses relative to the heather site, with drying typically being focussed on the areas around the trees, and reflecting the amount of water uptake. Moisture changes in the heather site were fairly heterogeneous are related to micro-topographic affects, lower interception ( 30% compared with 45%) and a smaller microclimatic effect of the canopy which serves to create greater fluctuations in soil moisture. Our results confirm the value in using geophysics to spatially elucidate subsurface plant-soil-water interactions.

The tri-soil experiment: do plants discriminate among vegetation soil types?

USDA-ARS?s Scientific Manuscript database

We tested if rooting mass and root nutrient uptake of cheatgrass (Bromus tectorum) or creeping wildrye (Leymus triticoides) were influenced by vegetation soil type. Three soil types (A horizons), similar in gross physical and chemical properties, were freshly-collected. The soils varied in the veget...

Effects of flooding on phosphorus and iron mobilization in highly weathered soils: Short-term effects and mechanisms

NASA Astrophysics Data System (ADS)

Maranguit, Deejay

2017-04-01

The strong affinity of phosphorus (P) to iron (Fe) oxides and hydroxides in highly weathered tropical soils limits P availability and therefore plant productivity. In flooded soils, however, P fixed by Fe oxides and hydroxides can be released and transformed to a more available form because of Fe3+ reduction to Fe2+. These P dynamics in flooded soils are well documented for rice paddies. Such effects are much less studied in other land-use types under the influence of seasonal flooding, especially in the tropics during heavy monsoon rains. The aim of this study was to investigate the mobilization of P during flooding leading to anaerobic conditions in topsoil and subsoil horizons depending on land-use type. Samples were collected in highly weathered soils from four replicate sites under natural rainforest, jungle rubber, rubber and oil palm plantations in Sumatra, Indonesia. Topsoil and subsoil were taken to ensure a wide range of soil organic matter (SOM) and P contents. Soils were incubated under anaerobic, flooded conditions at 30 ± 1 oC for 60 days. Our results confirmed the hypothesis that soil flooding mobilizes P and increases P availability. Two distinct and opposite phases, however, were observed upon flooding. During the first three weeks of flooding, the dissolved P (DP) concentration peaked, simultaneously with a peak of dissolved Fe2+ (DFe2+) and dissolved organic carbon (DOC) in the soil solution. After three weeks, P availability in soils decreased, although Fe-P and available P did not reach initial, pre-flooding levels. Accordingly, Fe dissolution and P mobilization were reversible processes. Furthermore, land-use type influenced the impacts of flooding on P and Fe forms mainly in the topsoil, where P dissolution and availability were generally higher under forest and, to a lesser extent, under jungle rubber. A positive correlation between DOC and DFe2+ (R2 = 0.42) in topsoil indicates that the intensity of microbially-mediated Fe3+ reduction is limited by the amount of available carbon (C) as an energy source for microorganisms. Moreover, microbial mineralization of organic P from SOM also increases P availability, and this process requires available C. This interpretation was supported by the strong correlation (R2 = 0.58) between available P and DOC, as well as between DP and DOC (R2 = 0.56) in topsoil. The increasing soil solution pH in topsoil and subsoil after flooding of all land-use types may also influence the P release over time. In summary, the increase of available P and DP during flooding is due to three main mechanisms: (1) P release via the microbially-mediated reductive dissolution of Fe3+ oxides; (2) P release during SOM mineralization and (3) solubility of Fe phosphate due to increasing pH. These mechanisms are relevant not only in riparian areas, where flooding occurs, but also in well-drained soil that is partly waterlogged after regular heavy rainfalls during the wet season. Likewise, the P cycle turnover is faster in compacted, often anaerobic plantation soils. Here, more P is pumped by the vegetation and then removed from plantations due to yield export.

How internal drainage affects evaporation dynamics from soil surfaces ?

NASA Astrophysics Data System (ADS)

Or, D.; Lehmann, P.; Sommer, M.

2017-12-01

Following rainfall, infiltrated water may be redistributed internally to larger depths or lost to the atmosphere by evaporation (and by plant uptake from depths at longer time scales). A large fraction of evaporative losses from terrestrial surfaces occurs during stage1 evaporation during which phase change occurs at the wet surface supplied by capillary flow from the soil. Recent studies have shown existence of a soil-dependent characteristic length below which capillary continuity is disrupted and a drastic shift to slower stage 2 evaporation ensues. Internal drainage hastens this transition and affect evaporative losses. To predict the transition to stage 2 and associated evaporative losses, we developed an analytical solution for evaporation dynamics with concurrent internal drainage. Expectedly, evaporative losses are suppressed when drainage is considered to different degrees depending on soil type and wetness. We observe that high initial water content supports rapid drainage and thus promotes the sheltering of soil water below the evaporation depth. The solution and laboratory experiments confirm nonlinear relationship between initial water content and total evaporative losses. The concept contributes to establishing bounds on regional surface evaporation considering rainfall characteristics and soil types.

Contrasting influence of soil nutrients and microbial community on differently sized basal consumers

NASA Astrophysics Data System (ADS)

Vonk, J. Arie; Mulder, Christian

2013-07-01

There is increasing evidence of the coexistence of trophic and environmental constraints belowground. While too often ignored in current literature, the extent to which phosphorus is relevant for soil biota was demonstrated in this study by positive correlations of soil C/P and N/P ratios with all the measured microbial parameters (biomass, density and activity), with the numerical abundance of roundworms (Nematoda) and potworms (Enchytraeidae) from lower trophic levels and with the roundworm biomass. Total worm biomass seems dependent on land use, being in rangelands about twice as high as in croplands, although the relative contribution of potworms remains comparable for both land use types (49 ± 20 % SD versus 45 ± 27 % SD). Besides soil [P], soil type plays an important role in the relative biomass of potworms compared to roundworms. Soil parameters (here pH, C/P and N/P ratios) are better predictors for the abundance and biomass of roundworms than microbial parameters. We also propose a graphical way to visualize the major responses of basal consumers to their microbial drivers.

The preferential flow of soil: A widespread phenomenon in pedological perspectives

NASA Astrophysics Data System (ADS)

Zhang, Yinghu; Zhang, Mingxiang; Niu, Jianzhi; Zheng, Haijin

2016-06-01

The article provides an overview of studies about the preferential flow phenomenon. This phenomenon is one of the types of the transportation of water solution through the soil profile by preferential channels (pathways) with a relatively high speed and with a slight change in the chemical composition of the solution. Interest in this phenomenon has risen sharply in the last two decades due to the observed fast transportation of contaminants from soil surface into groundwater level. On the basis of the literature data, the authors give the definition of this phenomenon, consider its types, degree, features, mechanisms, methods and models and research perspectives, in particular the interaction between preferential flow and soil matrix flow. The article considers the aspects of the movement of soil water carrying heavy metals and pesticides; hence, it concerns the protection of environment and people's health. It provides the thorough review of the studies on the preferential flow, and describes the research directions and their development.

Lead (II) removal from natural soils by enhanced electrokinetic remediation.

PubMed

Altin, Ahmet; Degirmenci, Mustafa

2005-01-20

Electrokinetic remediation is a very effective method to remove metal from fine-grained soils having low adsorption and buffering capacity. However, remediation of soil having high alkali and adsorption capacity via the electrokinetic method is a very difficult process. Therefore, enhancement techniques are required for use in these soil types. In this study, the effect of the presence of minerals having high alkali and cation exchange capacity in natural soil polluted with lead (II) was investigated by means of the efficiency of electrokinetic remediation method. Natural soil samples containing clinoptilolite, gypsum and calcite minerals were used in experimental studies. Moreover, a sample containing kaolinite minerals was studied to compare with the results obtained from other samples. Best results for soils bearing alkali and high sorption capacity minerals were obtained upon addition of 3 mol AcH and application of 20 V constant potential after a remediation period of 220 h. In these test conditions, lead (II) removal efficiencies for these samples varied between 60% and 70% up to 0.55 normalized distance. Under the same conditions, removal efficiencies in kaolinite sample varied between 50% and 95% up to 0.9 normalized distance.

Soil respiration in typical plant communities in the wetland surrounding the high-salinity Ebinur Lake

NASA Astrophysics Data System (ADS)

Li, Yanhong; Zhao, Mingliang; Li, Fadong

2018-03-01

Soil respiration in wetlands surrounding lakes is a vital component of the soil carbon cycle in arid regions. However, information remains limited on the soil respiration around highly saline lakes during the plant growing season. Here, we aimed to evaluate diurnal and seasonal variation in soil respiration to elucidate the controlling factors in the wetland of Ebinur Lake, Xinjiang Uygur Autonomous Region, western China. We used a soil carbon flux automatic analyzer (LI-840A) to measure soil respiration rates during the growing season (April to November) in two fields covered by reeds and tamarisk and one field with no vegetation (bare soil) from 2015 to 2016. The results showed a single peak in the diurnal pattern of soil respiration from 11:00 to 17:00 for plots covered in reeds, tamarisk, and bare soil, with minimum values being detected from 03:00 to 07:00. During the growing season, the soil respiration of reeds and tamarisk peaked during the thriving period (4.16 and 3.75 mmol•m-2•s-1, respectively), while that of bare soil peaked during the intermediate growth period (0.74 mmol•m-2•s-1). The soil respiration in all three plots was lowest during the wintering period (0.08, 0.09, and-0.87 mmol•m-2•s-1, respectively). Air temperature and relative humidity significantly influenced soil respiration. A significant linear relationship was detected between soil respiration and soil temperature for reeds, tamarisk, and bare soil. The average Q10 of reeds and tamarisk were larger than that of bare soil. However, soil moisture content was not the main factor controlling soil respiration. Soil respiration was negatively correlated with soil pH and soil salinity in all three plot types. In contrast, soil respiration was positively correlated with organic carbon. Overall, CO2 emissions and greenhouse gases had a relatively weak effect on the wetlands surrounding the highly saline Ebinur Lake.

Evaluating the efficacy of a centrifugation-flotation method for extracting Ascaris ova from soil.

PubMed

Cranston, Imogen; Teoh, Penelope J; Baker, Sarah M; Sengupta, Mita E; Ensink, Jeroen H J

2016-07-01

Soil transmitted helminths (STH) continue to be associated with high burdens of disease, with an estimated 1.45 billion people infected with STH globally. The promotion and construction of latrines is considered the first barrier to prevent transmission of STH. The absence of a reliable method to extract STH ova from soil makes it challenging to examine whether the use of latrines may or may not have an effect on environmental contamination with ova. The present study evaluated the recovery rate of a method developed to extract STH ova from soil. The adapted centrifugation and flotation technique was applied to 15 soil types, which were seeded with Ascaris suum ova. Soil type, soil moisture content, soil texture and organic matter content were assessed for each soil sample. The average ova recovery rate was 28.2%, with the recovery rate of the method decreasing with increasing soil moisture content, particle size and organic matter content. The association between recovery rate and organic matter content was statistically significant. The present study identified a low recovery rate for an adapted centrifugation-flotation method, although this was similar to the recovery rate demonstrated by other methods developed for soil. Soil organic matter content was significantly associated with ova recovery rates. © The Author 2016. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Hydrologic responses to restored wildfire regimes revealed by soil moisture-vegetation relationships

NASA Astrophysics Data System (ADS)

Boisramé, Gabrielle; Thompson, Sally; Stephens, Scott

2018-02-01

Many forested mountain watersheds worldwide evolved with frequent fire, which Twentieth Century fire suppression activities eliminated, resulting in unnaturally dense forests with high water demand. Restoration of pre-suppression forest composition and structure through a variety of management activities could improve forest resilience and water yields. This study explores the potential for "managed wildfire", whereby naturally ignited fires are allowed to burn, to alter the water balance. Interest in this type of managed wildfire is increasing, yet its long-term effects on water balance are uncertain. We use soil moisture as a spatially-distributed hydrologic indicator to assess the influence of vegetation, fire history and landscape position on water availability in the Illilouette Creek Basin in Yosemite National Park. Over 6000 manual surface soil moisture measurements were made over a period of three years, and supplemented with continuous soil moisture measurements over the top 1m of soil in three sites. Random forest and linear mixed effects models showed a dominant effect of vegetation type and history of vegetation change on measured soil moisture. Contemporary and historical vegetation maps were used to upscale the soil moisture observations to the basin and infer soil moisture under fire-suppressed conditions. Little change in basin-averaged soil moisture was inferred due to managed wildfire, but the results indicated that large localized increases in soil moisture had occurred, which could have important impacts on local ecology or downstream flows.

Lithologic distribution and geologic history of the Apollo 17 site: The record in soils and small rock particles from the highland massifs

NASA Astrophysics Data System (ADS)

Jolliff, Bradley L.; Rockow, Kaylynn M.; Korotev, Randy L.; Haskin, Larry A.

1996-01-01

Through analysis by instrumental neutron activation (INAA) of 789 individual lithic fragments from the 2 mm-4 mm grain-size fractions of five Apollo 17 soil samples (72443, 72503, 73243, 76283, and 76503) and petrographic examination of a subset, we have determined the diversity and proportions of rock types recorded within soils from the highland massifs. The distribution of rock types at the site, as recorded by lithic fragments in the soils, is an alternative to the distribution inferred from the limited number of large rock samples. The compositions and proportions of 2 mm-4 mm fragments provide a bridge between compositions of <1 mm fines, and types and proportions of rocks observed in large collected breccias and their clasts. The 2 mm-4 mm fraction of soil from South Massif, represented by an unbiased set of lithic fragments from station-2 samples 72443 and 72503, consists of 71% noritic impact-melt breccia, 7% incompatible-trace-element-(ITE)-poor highland rock types (mainly granulitic breccias), 19% agglutinates and regolith breccias, 1% high-Ti mare basalt, and 2% others (very-low-Ti (VLT) basalt, monzogabbro breccia, and metal). In contrast, the 2 mm-4 mm fraction of a soil from the North Massif, represented by an unbiased set of lithic fragments from station-6 sample 76503, has a greater proportion of ITE-poor highland rock types and mare-basalt fragments: it consists of 29% ITE-poor highland rock types (mainly granulitic breccias and troctolitic anorthosite), 25% impact-melt breccia, 13% high-Ti mare basalt, 31% agglutinates and regolith breccias, 1% orange glass and related breccia, and 1% others. Based on a comparison of mass-weighted mean compositions of the lithic fragments with compositions of soil fines from all Apollo 17 highland stations, differences between the station-2 and station-6 samples are representative of differences between available samples from the two massifs. From the distribution of different rock types and their compositions, we conclude the following: (1) North-Massif and South-Massif soil samples differ significantly in types and proportions of ITE-poor highland components and ITE-rich impact-melt-breccia components. These differences reflect crudely layered massifs and known local geology. The greater percentage of impact-melt breccia in the South-Massif light-mantle soil stems from derivation of the light mantle from the top of the massif, which apparently is richer in noritic impact-melt breccia than are lower parts of the massifs. (2) At station 2, the 2 mm-4 mm grain-size fraction is enriched in impact-melt breccias compared to the <1 mm fraction, suggesting that the <1 mm fraction within the light mantle has a greater proportion of lithologies such as granulitic breccias which are more prevalent lower in the massifs and which we infer to be older (pre-basin) highland components. (3) Soil from station 6, North Massif, contains magnesian troctolitic anorthosite, which is a component that is rare in station-2 South-Massif soils. (4) Compositional differences between poikilitic impact-melt breccias from the two massifs suggest broad-scale heterogeneity in impact-melt breccia interpreted by most investigators to be ejecta from the Serenitatis basin. We have found rock types not previously recognized or uncommon at the Apollo 17 site. These include (1) ITE-rich impact-melt breccias that are compositionally distinct from previously recognized "aphanitic" and "poikilitic" groups at Apollo 17; (2) regolith breccias that are free of mare components and poor in impact melt of the types associated with the main melt-breccia groups, and that, if those groups derive from the Serenitatis impact, may represent the pre-Serenitatis surface; (3) several VLT basalts, including an unusual very-high-K basaltic breccia; (4) orange-glass regolith breccias; (5) aphanitic-matrix melt breccias at station 6; (6) fragments of alkali-rich composition, including alkali anorthosite, and monzogabbro; (7) one fragment of 72275-type KREEP basalt from station 3; (8) seven lithic fragments of ferroan-anorthositic-suite rocks; and (9) a fragment of metal, possibly from an L chondrite. Some of these lithologies have been found only as lithic fragments in the soils and not among the large rock samples. In contrast, we have not found among the 2 mm-4 mm lithic fragments individual samples of certain lithologies that have been recognized as clasts in breccias (e.g., dunite and spinel troctolite). The diversity of lithologic information contained in the lithic fragments of these soils nearly equals that found among large rock samples, and most information bearing on petrographic relationships is maintained, even in such small samples. Given a small number of large samples for "petrologic ground truth," small lithic fragments contained in soil "scoop" samples can provide the basis for interpreting the diversity of rock types and their proportions in remotely sensed geologic units. They should be considered essential targets for future automated sample-analysis and sample-return missions.

[Assessment of farmland soil quality under different utilization intensity in arid area].

PubMed

Gui, Dong-Wei; Mu, Gui-Jin; Lei, Jia-Qiang; Zeng, Fan-Jiang; Wang, Hui

2009-04-01

Based on the 2005-2007 experimental data in Cele oasis in the southern margin of Tarim Basin of Xinjiang, the soil quality of four typical types of farmland with different utilization intensity, i.e., farmland with high input, farmland with normal input, newly reclaimed farmland, and farmland in oasis' interior, was analyzed and assessed by using sustainable yield index, soil improvement index, and soil quality synthesis index. Among the farmlands, there were significant differences in the contents of soil organic matter, available nitrogen, and available phosphorus. Newly reclaimed farmland had the lowest level of soil quality, while the farmland in oasis' interior had relatively higher soil quality. This study could help the reasonable exploitation and utilization of farmlands in Cele oasis, and the protection of local farmland eco-environment.

Effect of long-term zinc pollution on soil microbial community resistance to repeated contamination.

PubMed

Klimek, Beata

2012-04-01

The aim of the study was to compare the effects of stress (contamination trials) on the microorganisms in zinc-polluted soil (5,018 mg Zn kg(-1) soil dry weight) and unpolluted soil (141 mg Zn kg(-1) soil dw), measured as soil respiration rate. In the laboratory, soils were subjected to copper contamination (0, 500, 1,500 and 4,500 mg kg(-1) soil dw), and then a bactericide (oxytetracycline) combined with a fungicide (captan) along with glucose (10 mg g(-1) soil dw each) were added. There was a highly significant effect of soil type, copper treatment and oxytetracycline/captan treatment. The initial respiration rate of chronically zinc-polluted soil was higher than that of unpolluted soil, but in the copper treatment it showed a greater decline. Microorganisms in copper-treated soil were more susceptible to oxytetracycline/captan contamination. After the successive soil contamination trials the decline of soil respiration was greater in zinc-polluted soil than in unpolluted soil.

The influence of soil type and altered lignin biosynthesis on the physiology, growth and carbon allocation in Populus tremuloides

Treesearch

Jessica E. Hancock; Kate L. Bradley; Christian P. Giardina; Kurt S. Pregitzer

2008-01-01

Plants influence soil carbon (C) formation through the quality and quantity of C released to soil. Soil type, in turn can modify a plant's influence on soil through effects on plant production, tissue quality and regulation of soil C decomposition and stabilization. Wild-type aspen and three transgenic aspen lines expressing reduced stem lignin concentrations and/...

Spatial distribution and hazard degree of soil erosion of sloping croplands in northeast China

NASA Astrophysics Data System (ADS)

Zhang, T.

2017-12-01

Soil erosion is causing damage to the sloping croplands of northeast China and threatening the food security of the nation. However, little is known about the problem in macro scale. This study aims to investigate the area, slope gradient, soil erosion rate and year limit of erosion of the sloping croplands in whole northeast China and different geomorphologic regions, soil types, watersheds and administrative divisions of it, to estimate quantitatively the necessity and urgency of soil conservation and to offer advices. Meteorological data, topography data, geomorphology data, soil data and landuse data were collected. The China Soil Loss Equation was applied. The results indicated that: (1) Total area of the sloping croplands of northeast China is 195000 km2. They mainly distributed in Changbai mountainous region, eastern Songnen plain and Daxinganling mountainous region, with dark-brown earth, black soil and brown earth as main soil types. Total area of the sloping croplands steeper than 5 degree is 31000 km2. They mainly distributed in the mountain regions, with dark-brown earth and brown earth as main soil types. (2) The soil erosion rates of 92% of the sloping croplands have exceeded the soil loss tolerance in the national standard (0.15 mm/a). These croplands need to be conserved. The A horizon depths of 66% of the sloping croplands are less than 30 cm , while the year limit of A horizon erosion of 59% of the sloping croplands are less than 100 a. These croplands need to be conserved immediately. (3) Contour farming is suitable to 84% of the sloping croplands and deserves more attention. The sloping croplands steeper than 15 degree and those located in the aeolian sandy soil and some others soil types contributed little in grain production with high hazard degrees of erosion and should be reused for other purposes, as soon as possible. (4) The Changbai mountainous region, Daxinganling mountainous region, the dark-brown earth region and the brown earth region are the key regions, difficult regions and priority regions of the conversation work and deserve more attention. (5) The load, difficulty and urgency of the conservation work varies widely among counties. Therefore, each county should be dealt with on its individual merits, but not as the same case.

Hyperspectral Imaging Analysis for the Classification of Soil Types and the Determination of Soil Total Nitrogen

PubMed Central

Jia, Shengyao; Li, Hongyang; Wang, Yanjie; Tong, Renyuan; Li, Qing

2017-01-01

Soil is an important environment for crop growth. Quick and accurately access to soil nutrient content information is a prerequisite for scientific fertilization. In this work, hyperspectral imaging (HSI) technology was applied for the classification of soil types and the measurement of soil total nitrogen (TN) content. A total of 183 soil samples collected from Shangyu City (People’s Republic of China), were scanned by a near-infrared hyperspectral imaging system with a wavelength range of 874–1734 nm. The soil samples belonged to three major soil types typical of this area, including paddy soil, red soil and seashore saline soil. The successive projections algorithm (SPA) method was utilized to select effective wavelengths from the full spectrum. Pattern texture features (energy, contrast, homogeneity and entropy) were extracted from the gray-scale images at the effective wavelengths. The support vector machines (SVM) and partial least squares regression (PLSR) methods were used to establish classification and prediction models, respectively. The results showed that by using the combined data sets of effective wavelengths and texture features for modelling an optimal correct classification rate of 91.8%. could be achieved. The soil samples were first classified, then the local models were established for soil TN according to soil types, which achieved better prediction results than the general models. The overall results indicated that hyperspectral imaging technology could be used for soil type classification and soil TN determination, and data fusion combining spectral and image texture information showed advantages for the classification of soil types. PMID:28974005

Chloride and sulfate salinity effects on selenium accumulation by tall fescue. [Festuca arundinacea Schreb

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lin Wu; Zhang-Zhi Huang

The discovery of high levels of Se in soil and water samples from the San Joaquin Valley, California, and of its responsibility for deformity and death of wildlife at Kesterson National Wildlife Refuge have renewed interest in the bioaccumulation of this element. Greenhouse nutrient solution culture and field experiments were conducted to examine the effects of Cl and SO{sub 4} salt on growth and Se accumulation in tall fescue (Festuca arundinacea Schreb.) cultivars Alta, Falcon, and Olympic. Sulfate salt substantially reduced growth inhibition and Se accumulation. Tall fescue from the field irrigated with water low in salinity had higher tissuemore » Se concentration than plants from the field irrigated with water high in salinity. No difference in tissue Se concentration was found among the three tall fescue cultivars; however, forage-type Alta produced the most shoot biomass and accumulated the most total Se. The soil irrigated with water high in salinity had 10 times higher Se concentration than soil irrigated with water low in salinity. The highest soil Se concentration was found in the top 15 cm of soil. Growing fescue for one year reduced soil Se by 50%. Selenium concentrations below 15-cm depth were lower and similar between the bare soil and the soil under tall fescue. Both the high and low salinity water irrigations did not cause high levels of Se accumulation by the tall fescue cultivars unless there was continual addition of Se into the system. This study generated important information for Se bioaccumulation management in soils with elevated salinity and Se levels.« less

Assessing the effect of biochar on erosion by using a high precision rainfall simulator

NASA Astrophysics Data System (ADS)

Goldman, Nina; Mayer, Marius; Fister, Wolfgang

2017-04-01

Numerus studies have explored the effect of biochar as a soil amendment and its beneficial effects on different soil properties. Adding biochar to soils might also act as a long-term carbon sink, which would mitigate the anthropogenic climate change. However, there are limitations regarding the current process knowledge on the effects of biochar on soil erosion and its erodibility. First test results point towards lower erosion rates of the substrates, which were enriched with biochar. In contrast, biochar concurrently shows relatively high erosion rates due to its lower bulk density, which makes it more susceptible to erosion. However, the number of conducted experiments does not yet allow quantitative statements. The overall objectives of this study are to gain insight into the process knowledge of erodibility of soils with incorporated biochar, and to develop new techniques for their observation. A drip type rainfall simulator is used on a microscale flume (0.2m2) to be able to control and monitor the thin surface flows and rainfall characteristics precisely. Two different types of biochars (high and low temperature pyrolysis) are used in combination with different substrates ranging from pure sand to naturally developed soils. Depending on the particle size and density of the biochar, different erosion rates can be observed. Particle analysis of the eroded material produces insights into which particle sizes and forms are preferably eroded. Since differentiation between eroded soil organic matter and biochar is very difficult without the use of heavy acids, two new methods are being developed and tested to monitor erosion rates of biochar. Comparing the original substrate with the eroded sediment by means of photogrammetry and isotope analysis, it should be possible to infer how much biochar was discharged and to assess the actual particle movement on the erosion flume. The results of this study could provide guidelines for the types of biochar that should be incorporated into fields as well as to calculate the potential monetary loss due to biochar discharge through rainfall events.

General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types

PubMed Central

Birkhofer, Klaus; Schöning, Ingo; Alt, Fabian; Herold, Nadine; Klarner, Bernhard; Maraun, Mark; Marhan, Sven; Oelmann, Yvonne; Wubet, Tesfaye; Yurkov, Andrey; Begerow, Dominik; Berner, Doreen; Buscot, François; Daniel, Rolf; Diekötter, Tim; Ehnes, Roswitha B.; Erdmann, Georgia; Fischer, Christiane; Foesel, Bärbel; Groh, Janine; Gutknecht, Jessica; Kandeler, Ellen; Lang, Christa; Lohaus, Gertrud; Meyer, Annabel; Nacke, Heiko; Näther, Astrid; Overmann, Jörg; Polle, Andrea; Pollierer, Melanie M.; Scheu, Stefan; Schloter, Michael; Schulze, Ernst-Detlef; Schulze, Waltraud; Weinert, Jan; Weisser, Wolfgang W.; Wolters, Volkmar; Schrumpf, Marion

2012-01-01

Very few principles have been unraveled that explain the relationship between soil properties and soil biota across large spatial scales and different land-use types. Here, we seek these general relationships using data from 52 differently managed grassland and forest soils in three study regions spanning a latitudinal gradient in Germany. We hypothesize that, after extraction of variation that is explained by location and land-use type, soil properties still explain significant proportions of variation in the abundance and diversity of soil biota. If the relationships between predictors and soil organisms were analyzed individually for each predictor group, soil properties explained the highest amount of variation in soil biota abundance and diversity, followed by land-use type and sampling location. After extraction of variation that originated from location or land-use, abiotic soil properties explained significant amounts of variation in fungal, meso- and macrofauna, but not in yeast or bacterial biomass or diversity. Nitrate or nitrogen concentration and fungal biomass were positively related, but nitrate concentration was negatively related to the abundances of Collembola and mites and to the myriapod species richness across a range of forest and grassland soils. The species richness of earthworms was positively correlated with clay content of soils independent of sample location and land-use type. Our study indicates that after accounting for heterogeneity resulting from large scale differences among sampling locations and land-use types, soil properties still explain significant proportions of variation in fungal and soil fauna abundance or diversity. However, soil biota was also related to processes that act at larger spatial scales and bacteria or soil yeasts only showed weak relationships to soil properties. We therefore argue that more general relationships between soil properties and soil biota can only be derived from future studies that consider larger spatial scales and different land-use types. PMID:22937029

Degradation of organic pollutants in Mediterranean forest soils amended with sewage sludge.

PubMed

Francisca Gomez-Rico, M; Font, Rafael; Vera, Jose; Fuentes, David; Disante, Karen; Cortina, Jordi

2008-05-01

The degradation of two groups of organic pollutants in three different Mediterranean forest soils amended with sewage sludge was studied for nine months. The sewage sludge produced by a domestic water treatment plant was applied to soils developed from limestone, marl and sandstone, showing contrasting alkalinity and texture. The compounds analysed were: linear alkylbenzene sulphonates (LAS) with a 10-13 carbon alkylic chain, and nonylphenolic compounds, including nonylphenol (NP) and nonylphenol ethoxylates with one and two ethoxy groups (NP1EO+NP2EO). These compounds were studied because they frequently exceed the limits proposed for sludge application to land in Europe. After nine months, LAS decomposition was 86-96%, and NP+NP1EO+NP2EO decomposition was 61-84%, which can be considered high. Temporal trends in LAS and NP+NP1EO+NP2EO decomposition were similar, and the concentrations of both types of compounds were highly correlated. The decomposition rates were higher in the period of 6-9 months (summer period) than in the period 0-6 months (winter+spring period) for total LAS and NP+NP1EO+NP2EO. Differences in decay rates with regard to soil type were not significant. The average values of decay rates found are similar to those observed in agricultural soils.

Determination of diacylhydrazines-type insect growth regulator JS-118 residues in cabbage and soil by high performance liquid chromatography with DAD detection.

PubMed

Hu, J-Y; Deng, Z-B; Qin, D-M

2009-12-01

JS-118 is a diacylhydrazines-type insect growth regulator used extensively in China now. An analytical method for residues determination of JS-118 in cabbage and soil samples by high performance liquid chromatography with DAD detection was established and optimized. Primary secondary amine solid phase extraction cartridge was used for sample preparation. Mean recoveries for the analyte ranged from 96.6% to 107.0% with CV value less than 4.7%. The limit of quantification is 0.01 mg/kg. Direct confirmation of JS-118 residues in samples was realized by high performance liquid chromatography-mass spectrometry. The proposed method is simple, rapid and reliable to perform and could be utilized for monitoring of pesticides residues.

Soil-related variations in the population dynamics of six dipterocarp tree species with strong habitat preferences.

PubMed

Yamada, Toshihiro; Yamada, Yuko; Okuda, Toshinori; Fletcher, Christine

2013-07-01

Differences in the density of conspecific tree individuals in response to environmental gradients are well documented for many tree species, but how such density differences are generated and maintained is poorly understood. We examined the segregation of six dipterocarp species among three soil types in the Pasoh tropical forest, Malaysia. We examined how individual performance and population dynamics changed across the soil types using 10-year demographic data to compare tree performance across soil types, and constructed population matrix models to analyze the population dynamics. Species showed only minor changes in mortality and juvenile growth across soil types, although recruitment differed greatly. Clear, interspecific demographic trade-offs between growth and mortality were found in all soil types. The relative trade-offs by a species did not differ substantially among the soil types. Population sizes were projected to remain stable in all soil types for all species with one exception. Our life-table response experiment demonstrated that the population dynamics of a species differed only subtly among soil types. Therefore, species with strong density differences across soil types do not necessarily differ greatly in their population dynamics across the soil types. In contrast, interspecific differences in population dynamics were large. The trade-off between mortality and growth led to a negative correlation between the contributions of mortality and growth to variations in the population growth rate (λ) and thus reduced their net contributions. Recruitment had little impact on the variation in λ. The combination of these factors resulted in little variation in λ among species.

Biodegradation of aged diesel in diverse soil matrixes: impact of environmental conditions and bioavailability on microbial remediation capacity.

PubMed

Sutton, Nora B; van Gaans, Pauline; Langenhoff, Alette A M; Maphosa, Farai; Smidt, Hauke; Grotenhuis, Tim; Rijnaarts, Huub H M

2013-07-01

While bioremediation of total petroleum hydrocarbons (TPH) is in general a robust technique, heterogeneity in terms of contaminant and environmental characteristics can impact the extent of biodegradation. The current study investigates the implications of different soil matrix types (anthropogenic fill layer, peat, clay, and sand) and bioavailability on bioremediation of an aged diesel contamination from a heterogeneous site. In addition to an uncontaminated sample for each soil type, samples representing two levels of contamination (high and low) were also used; initial TPH concentrations varied between 1.6 and 26.6 g TPH/kg and bioavailability between 36 and 100 %. While significant biodegradation occurred during 100 days of incubation under biostimulating conditions (64.4-100 % remediation efficiency), low bioavailability restricted full biodegradation, yielding a residual TPH concentration. Respiration levels, as well as the abundance of alkB, encoding mono-oxygenases pivotal for hydrocarbon metabolism, were positively correlated with TPH degradation, demonstrating their usefulness as a proxy for hydrocarbon biodegradation. However, absolute respiration and alkB presence were dependent on soil matrix type, indicating the sensitivity of results to initial environmental conditions. Through investigating biodegradation potential across a heterogeneous site, this research illuminates the interplay between soil matrix type, bioavailability, and bioremediation and the implications of these parameters for the effectiveness of an in situ treatment.

The applicability of ERTS-1 data covering the major landforms of Kenya. [landforms, vegetation, soils, forests

NASA Technical Reports Server (NTRS)

Omino, J. H. O. (Principal Investigator)

1973-01-01

The author has identified the following significant results. Five investigators report on the applicability of ERTS-1 data covering the major landforms of Kenya. Deficiencies due to lack of equipment, repetitive coverage and interpretation know-how are also reported on. Revision of lake shorelines is an immediate benefit. Basement system metasediments are rapidly differentiated, but dune areas are not readily distinguishable from sandy soils. Forest, moorland, high altitude grass, tea, and conifer plantations are readily distinguished, with podocarpus forest especially distinguishable from podocarpus/juniperus forest. In the arid areas physiographic features, indicating the major soil types, are readily identified and mapped. Preliminary vegetation type analysis in the Mara Game Reserve indicates that in a typical savannah area about 36% of the vegetation types are distinguishable at a scale of 1:1 million as well as drainage patterns and terrain features.

GPR monitoring for non-uniform infiltration through a high permeable gravel layer in the test sand box

NASA Astrophysics Data System (ADS)

Kuroda, Seiichiro; Ishii, Nobuyuki; Morii, Toshihiro

2017-04-01

Recently capillary barriers have been known as a method to protect subsurface regions against infiltration from soil surface. It has essentially non-uniform structure of permeability or soil physical property. To identify the function of the capillary barrier, the site-characterization technique for non-uniform soil moisture distribution and infiltration process is needed. We built a sand box in which a thin high-permeable gravel layer was embedded and conducted a infiltration test, including non-uniform flow of soil water induced by capillary barrier effects. We monitored this process by various types of GPR measurements, including time-lapsed soundings with multi-frequency antenna and transmission measurements like one using cross-borehole radar. Finally we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil. This work has partially supported by JSPS Grant-in-aid Scientific Research program, No.16H02580.

High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia.

PubMed

Alves-Pereira, Alessandro; Peroni, Nivaldo; Cavallari, Marcelo Mattos; Lemes, Maristerra R; Zucchi, Maria Imaculada; Clement, Charles R

2017-01-01

Although manioc is well adapted to nutrient-poor Oxisols of Amazonia, ethnobotanical observations show that bitter manioc is also frequently cultivated in the highly fertile soils of the floodplains and Amazonian dark earths (ADE) along the middle Madeira River. Because different sets of varieties are grown in each soil type, and there are agronomic similarities between ADE and floodplain varieties, it was hypothesized that varieties grown in ADE and floodplain were more closely related to each other than either is to varieties grown in Oxisols. We tested this hypothesis evaluating the intra-varietal genetic diversity and the genetic relationships among manioc varieties commonly cultivated in Oxisols, ADE and floodplain soils. Genetic results did not agree with ethnobotanical expectation, since the relationships between varieties were variable and most individuals of varieties with the same vernacular name, but grown in ADE and floodplain, were distinct. Although the same vernacular name could not always be associated with genetic similarities, there is still a great amount of variation among the varieties. Many ecological and genetic processes may explain the high genetic diversity and differentiation found for bitter manioc varieties, but all contribute to the maintenance and amplification of genetic diversity within the manioc in Central Amazonia.

[Ecological suitability regionalization for Gastrodia elata in Zhaotong based on Maxent and ArcGIS].

PubMed

Shi, Zi-Wei; Ma, Cong-Ji; Kang, Chuan-Zhi; Wang, Li; Zhang, Zhi-Hui; Chen, Jun-Fei; Zhang, Xiao-Bo; Liu, Da-Hui

2016-09-01

In this paper, the potential distribution information and ecological suitability regionalization for Gastrodia elata in Zhaotong were studied based on the climate, terrain, soil and vegetation factors analysis by Maxent and ArcGIS. The results showed that the highly potential distribution (suitability index>0.6) mainly located in Zhaotong, Yunnan province（Zhenxiong,Yiliang and Daguan county, with an area of 2 872 km²）, and Bijie, Guizhou province （Hezhang,Bijie,Weining county, 1 251 km²）. The AUC of ROC curve was above 0.99, indicating that the predictive results with the Maxent model were highly precise. The main ecological factors determining the potential distribution were the altitude, average rainfall in November, average rainfall in October, vegetation types, average rainfall in March, average rainfall in April,soil types,isothermal characteristic and average rainfall in June. The environmental variables in the highly potential areas were determined as altitude around 1 450-2 200 m,annual average temperature around 18.0-20.4 ℃,annual average precipitation around 900 mm,yellow soil or yellow brown soil,and acid sandy loam or slightly acidic sandy loam.The results will provide valuable references for plantation regionalization and the siting for imitation wild planting of G. elata in Zhaotong. Copyright© by the Chinese Pharmaceutical Association.

High genetic diversity among and within bitter manioc varieties cultivated in different soil types in Central Amazonia

PubMed Central

Alves-Pereira, Alessandro; Peroni, Nivaldo; Cavallari, Marcelo Mattos; Lemes, Maristerra R.; Zucchi, Maria Imaculada; Clement, Charles R.

2017-01-01

Abstract Although manioc is well adapted to nutrient-poor Oxisols of Amazonia, ethnobotanical observations show that bitter manioc is also frequently cultivated in the highly fertile soils of the floodplains and Amazonian dark earths (ADE) along the middle Madeira River. Because different sets of varieties are grown in each soil type, and there are agronomic similarities between ADE and floodplain varieties, it was hypothesized that varieties grown in ADE and floodplain were more closely related to each other than either is to varieties grown in Oxisols. We tested this hypothesis evaluating the intra-varietal genetic diversity and the genetic relationships among manioc varieties commonly cultivated in Oxisols, ADE and floodplain soils. Genetic results did not agree with ethnobotanical expectation, since the relationships between varieties were variable and most individuals of varieties with the same vernacular name, but grown in ADE and floodplain, were distinct. Although the same vernacular name could not always be associated with genetic similarities, there is still a great amount of variation among the varieties. Many ecological and genetic processes may explain the high genetic diversity and differentiation found for bitter manioc varieties, but all contribute to the maintenance and amplification of genetic diversity within the manioc in Central Amazonia. PMID:28399193

High heterogeneity in soil composition and quality in different mangrove forests of Venezuela.

PubMed

Otero, X L; Méndez, A; Nóbrega, G N; Ferreira, T O; Meléndez, W; Macías, F

2017-09-18

Mangrove forests play an important role in biogeochemical cycles of metals, nutrients, and C in coastal ecosystems. However, these functions could be strongly affected by the mangrove soil degradation. In this study, we performed an intensive sampling characterizing mangrove soils under different types of environment (lagoon/gulf) and vegetation (Rhizophora/Avicennia/dead mangrove) in the Venezuelan coast. To better understand the spatial heterogeneity of the composition and characteristics of the soils, a wide range of the soil attributes were analyzed. In general, the soils were anoxic (Eh < 200 mV), with a neutral pH and low concentration in toxic metals; nevertheless, they varied widely in the soil and its quality-defining parameters (e.g., clay contents, total organic carbon, Fe, Al, toxic trace metals). It is noteworthy that the mangroves presented a low Fe Pyrite content due to a limitation in the Fe oxyhydroxide contents, especially in soils with higher organic C content (TOC > 15%). Finally, the dead mangrove showed significantly lower amounts of TOC and fibers (in comparison to the well-preserved mangrove forest), which indicates that the C pools in mangrove soils are highly sensitive also to natural impact, such as ENSO.

Establishment and effectiveness of inoculated arbuscular mycorrhizal fungi in agricultural soils.

PubMed

Köhl, Luise; Lukasiewicz, Catherine E; van der Heijden, Marcel G A

2016-01-01

Arbuscular mycorrhizal fungi (AMF) are promoted as biofertilizers for sustainable agriculture. So far, most researchers have investigated the effects of AMF on plant growth under highly controlled conditions with sterilized soil, soil substrates or soils with low available P or low inoculum potential. However, it is still poorly documented whether inoculated AMF can successfully establish in field soils with native AMF communities and enhance plant growth. We inoculated grassland microcosms planted with a grass-clover mixture (Lolium multiflorum and Trifolium pratense) with the arbuscular mycorrhizal fungus Rhizoglomus irregulare. The microcosms were filled with eight different unsterilized field soils that varied greatly in soil type and chemical characteristics and indigenous AMF communities. We tested whether inoculation with AMF enhanced plant biomass and R. irregulare abundance using a species specific qPCR. Inoculation increased the abundance of R. irregulare in all soils, irrespective of soil P availability, the initial abundance of R. irregulare or the abundance of native AM fungal communities. AMF inoculation had no effect on the grass but significantly enhanced clover yield in five out of eight field soils. The results demonstrate that AMF inoculation can be successful, even when soil P availability is high and native AMF communities are abundant. © 2015 John Wiley & Sons Ltd.

Bioremediation of a weathered and a recently oil-contaminated soils from Brazil: a comparison study.

PubMed

Trindade, P V O; Sobral, L G; Rizzo, A C L; Leite, S G F; Soriano, A U

2005-01-01

The facility with which hydrocarbons can be removed from soils varies inversely with aging of soil samples as a result of weathering. Weathering refers to the result of biological, chemical and physical processes that can affect the type of hydrocarbons that remain in a soil. These processes enhance the sorption of hydrophobic organic contaminants (HOCs) to the soil matrix, decreasing the rate and extent of biodegradation. Additionally, pollutant compounds in high concentrations can more easily affect the microbial population of a recently contaminated soil than in a weathered one, leading to inhibition of the biodegradation process. The present work aimed at comparing the biodegradation efficiencies obtained in a recently oil-contaminated soil (spiked one) from Brazil and an weathered one, contaminated for four years, after the application of bioaugmentation and biostimulation techniques. Both soils were contaminated with 5.4% of total petroleum hydrocarbons (TPHs) and the highest biodegradation efficiency (7.4%) was reached for the weathered contaminated soil. It could be concluded that the low biodegradation efficiencies reached for all conditions tested reflect the treatment difficulty of a weathered soil contaminated with a high crude oil concentration. Moreover, both soils (weathered and recently contaminated) submitted to bioaugmentation and biostimulation techniques presented biodegradation efficiencies approximately twice as higher as the ones without the aforementioned treatment (natural attenuation).

Diversity and succession of autotrophic microbial community in high-elevation soils along deglaciation chronosequence

NASA Astrophysics Data System (ADS)

Kong, W.; Liu, J.

2016-12-01

Global warming has resulted in substantial glacier retreats in high-elevation areas, exposing deglaciated soils to harsh environmental conditions. Autotrophic microbes are pioneering colonizers in the deglaciated soils and provide nutrients to the extreme ecosystem devoid of vegetation. However, autotrophic communities remain less studied in deglaciated soils. We explored the diversity and succession of the cbbL gene encoding the large subunit of form I RubisCO, a key CO2-fixing enzyme, using molecular methods in deglaciated soils along a 10-year deglaciation chronosequence on the Tibetan Plateau. Our results demonstrated that the abundance of all types of form I cbbL (IA/B, IC and ID) rapidly increased in young soils (0-2.5 years old) and kept stable in old soils. Soil total organic carbon (TOC) and total nitrogen (TN) gradually increased along the chronosequence and both demonstrated positive correlations with the abundance of bacteria and autotrophs, indicating that soil TOC and TN originated from autotrophs. Form IA/B autotrophs, affiliated with cyanobacteria, exhibited a substantially higher abundance than IC and ID. Cyanobacterial diversity and evenness increased in young soils (<6 years old) and then remained stable. Our findings suggest that cyabobacteria play an important role in accumulating TOC and TN in the deglaciated soils.

Responses of amphibian populations to water and soil factors in experimentally-treated aquatic macrocosms

USGS Publications Warehouse

Sparling, D.W.; Lowe, T.P.; Day, D.; Dolan, K.

1995-01-01

Survival of anuran embryos and tadpoles is reduced in acidic (pH < 5.0) waters under laboratory conditions. However, field data on the presence-absence of amphibian species and acidity are equivocal. This study attempts to reconcile some of this discrepancy by using macrocosms to examine the interaction of soil type and water acidification on free-ranging tadpole populations. Tadpoles were caught with activity traps in 24 aquatic macrocosms experimentally treated with H2SO4 and Al2(SO4)3 and lined with either comparatively high metal, Iow organic matter clay soils or lower metal, higher organic matter loams. Northern cricket frog (Acris crepitans) tadpole abundance was less in acidified macrocosms than in circumneutral ones (p < 0.05) and less in those with loam soils than in macrocosms with clay soils (p < 0.04). Gray treefrog (Hyla versicolor) abundance was affected by an interaction between soil and acidification (p < 0.07) in that treatment effects were only observed in macrocosms with clay soils (p < 0.01). No differences were observed among treatments for green frog (Rana clamitans) or southern leopard frog (R. utricularia) tadpoles. The study shows that soil type may interact with water conditions to affect amphibian populations in acidified waters

The Soil Series in Soil Classifications of the United States

NASA Astrophysics Data System (ADS)

Indorante, Samuel; Beaudette, Dylan; Brevik, Eric C.

2014-05-01

Organized national soil survey began in the United States in 1899, with soil types as the units being mapped. The soil series concept was introduced into the U.S. soil survey in 1903 as a way to relate soils being mapped in one area to the soils of other areas. The original concept of a soil series was all soil types formed in the same parent materials that were of the same geologic age. However, within about 15 years soil series became the primary units being mapped in U.S. soil survey. Soil types became subdivisions of soil series, with the subdivisions based on changes in texture. As the soil series became the primary mapping unit the concept of what a soil series was also changed. Instead of being based on parent materials and geologic age, the soil series of the 1920s was based on the morphology and composition of the soil profile. Another major change in the concept of soil series occurred when U.S. Soil Taxonomy was released in 1975. Under Soil Taxonomy, the soil series subdivisions were based on the uses the soils might be put to, particularly their agricultural uses (Simonson, 1997). While the concept of the soil series has changed over the years, the term soil series has been the longest-lived term in U.S. soil classification. It has appeared in every official classification system used by the U.S. soil survey (Brevik and Hartemink, 2013). The first classification system was put together by Milton Whitney in 1909 and had soil series at its second lowest level, with soil type at the lowest level. The second classification system used by the U.S. soil survey was developed by C.F. Marbut, H.H. Bennett, J.E. Lapham, and M.H. Lapham in 1913. It had soil series at the second highest level, with soil classes and soil types at more detailed levels. This was followed by another system in 1938 developed by M. Baldwin, C.E. Kellogg, and J. Thorp. In this system soil series were again at the second lowest level with soil types at the lowest level. The soil type concept was dropped and replaced by the soil phase in the 1950s in a modification of the 1938 Baldwin et al. classification (Simonson, 1997). When Soil Taxonomy was released in 1975, soil series became the most detailed (lowest) level of the classification system, and the only term maintained throughout all U.S. classifications to date. While the number of recognized soil series have increased steadily throughout the history of U.S. soil survey, there was a rapid increase in the recognition of new soil series following the introduction of Soil Taxonomy (Brevik and Hartemink, 2013). References Brevik, E.C., and A.E. Hartemink. 2013. Soil maps of the United States of America. Soil Science Society of America Journal 77:1117-1132. doi:10.2136/sssaj2012.0390. Simonson, R.W. 1997. Evolution of soil series and type concepts in the United States. Advances in Geoecology 29:79-108.

Re-evaluation and reconstruction of water purification system using soil. I. Assessment of soil as a sorbent of humic substances and phosphate ion.

PubMed

Fujikawa, Y; Hamasaki, T; Sugahara, M; Ozaki, H; Prasai, G; Yano, T; Imada, R; Tainaka, Y; Nakamura, W; Haruki, F

2004-01-01

The purpose of our study is to develop a treatment procedure for humic substances (HS hereafter) and phosphate ion in wastewater and environmental water by percolation of the water through a constructed soil layer at the hydraulic loading of a few metres per day. In the present work, batch sorption tests were conducted for more than 80 samples of soil, sludge, mineral and organic materials in order to find good sorbents for fulvic acid (FA hereafter) and phosphate ion. The results showed that the sorption of FA was high for some charcoal, and apatite and goethite minerals. Comparatively high sorption of FA was found for some Andosols and volcanic ash soil. Significant sorption of phosphate ion, on the other hand, was found for various types of soil, sludge from water treatment plants and some waste materials. The linear isotherm was obtained for the sorption of FA to a charcoal, apatite and goethite minerals, and Andosols.

Comparison of Chemical Extraction Methods for Determination of Soil Potassium in Different Soil Types

NASA Astrophysics Data System (ADS)

Zebec, V.; Rastija, D.; Lončarić, Z.; Bensa, A.; Popović, B.; Ivezić, V.

2017-12-01

Determining potassium supply of soil plays an important role in intensive crop production, since it is the basis for balancing nutrients and issuing fertilizer recommendations for achieving high and stable yields within economic feasibility. The aim of this study was to compare the different extraction methods of soil potassium from arable horizon of different types of soils with ammonium lactate method (KAL), which is frequently used as analytical method for determining the accessibility of nutrients and it is a common method used for issuing fertilizer recommendations in many Europe countries. In addition to the ammonium lactate method (KAL, pH 3.75), potassium was extracted with ammonium acetate (KAA, pH 7), ammonium acetate ethylenediaminetetraacetic acid (KAAEDTA, pH 4.6), Bray (KBRAY, pH 2.6) and with barium chloride (K_{BaCl_2 }, pH 8.1). The analyzed soils were extremely heterogeneous with a wide range of determined values. Soil pH reaction ( {pH_{H_2 O} } ) ranged from 4.77 to 8.75, organic matter content ranged from 1.87 to 4.94% and clay content from 8.03 to 37.07%. In relation to KAL method as the standard method, K_{BaCl_2 } method extracts 12.9% more on average of soil potassium, while in relation to standard method, on average KAA extracts 5.3%, KAAEDTA 10.3%, and KBRAY 27.5% less of potassium. Comparison of analyzed extraction methods of potassium from the soil is of high precision, and most reliable comparison was KAL method with KAAEDTA, followed by a: KAA, K_{BaCl_2 } and KBRAY method. Extremely significant statistical correlation between different extractive methods for determining potassium in the soil indicates that any of the methods can be used to accurately predict the concentration of potassium in the soil, and that carried out research can be used to create prediction model for concentration of potassium based on different methods of extraction.

Soil Microbial Biomass, Basal Respiration and Enzyme Activity of Main Forest Types in the Qinling Mountains

PubMed Central

Cheng, Fei; Peng, Xiaobang; Zhao, Peng; Yuan, Jie; Zhong, Chonggao; Cheng, Yalong; Cui, Cui; Zhang, Shuoxin

2013-01-01

Different forest types exert essential impacts on soil physical-chemical characteristics by dominant tree species producing diverse litters and root exudates, thereby further regulating size and activity of soil microbial communities. However, the study accuracy is usually restricted by differences in climate, soil type and forest age. Our objective is to precisely quantify soil microbial biomass, basal respiration and enzyme activity of five natural secondary forest (NSF) types with the same stand age and soil type in a small climate region and to evaluate relationship between soil microbial and physical-chemical characters. We determined soil physical-chemical indices and used the chloroform fumigation-extraction method, alkali absorption method and titration or colorimetry to obtain the microbial data. Our results showed that soil physical-chemical characters remarkably differed among the NSFs. Microbial biomass carbon (Cmic) was the highest in wilson spruce soils, while microbial biomass nitrogen (Nmic) was the highest in sharptooth oak soils. Moreover, the highest basal respiration was found in the spruce soils, but mixed, Chinese pine and spruce stands exhibited a higher soil qCO2. The spruce soils had the highest Cmic/Nmic ratio, the greatest Nmic/TN and Cmic/Corg ratios were found in the oak soils. Additionally, the spruce soils had the maximum invertase activity and the minimum urease and catalase activities, but the maximum urease and catalase activities were found in the mixed stand. The Pearson correlation and principle component analyses revealed that the soils of spruce and oak stands obviously discriminated from other NSFs, whereas the others were similar. This suggested that the forest types affected soil microbial properties significantly due to differences in soil physical-chemical features. PMID:23840671

[Impact of land-use type changes on soil nitrification and ammonia-oxidizing bacterial community composition].

PubMed

Yang, Li-Lin; Mao, Ren-Zhao; Liu, Jun-Jie; Liu, Xiao-Jing

2011-11-01

A comparative study was conducted to determine nitrification potentials and ammonia-oxidizing bacterial (AOB) community composition in 0-20 cm soil depth in adjacent native forest,natural grassland, and cropland soils on the Tibetan Plateau, by incubation experiment and by denaturing gradient gel electrophoresis (DGGE) of 16S rDNA, respectively. Cropland has the highest nitrification potential and nitrate concentration among the three land-use types (LUT), approximately 9 folds and more than 11 folds than that of the forests and grasslands, respectively. NO3(-) -N accounted for 70%-90% of inorganic N in cropland soil, while NH4(+) -N was the main form of inorganic N in forest and grassland soils. Nitrification potentials and nitrate concentrations showed no significant difference between native forest and grassland soils. The native forest showed the lowest nitrification potentials and the lowest AOB diversity and community composition among the three LUT. Conversions from natural grasslands to croplands remarkably decreased the AOB diversity and composition, but croplands remain high similarity in AOB community composition compared with grasslands. The minimal and the lowest diversity of AOB in native forests directly resulted to the lowest nitrification potentials compared to natural grasslands and croplands. From the fact of the highest nitrification potentials and nitrate concentrations in croplands indicated that there were the most substantial AOB with higher activity and priority. The results provide evidence that changes of land-use type can affect both soil nitrogen internal cycling process, the diversity, community and activity of AOB, which further affect soil environment quality and the long-term sustainability of ecosystems.

Driving forces of heavy metal changes in agricultural soils in a typical manufacturing center.

PubMed

Qiu, Menglong; Li, Fangbai; Wang, Qi; Chen, Junjian; Yang, Guoyi; Liu, Liming

2015-05-01

Heavy metal concentrations in 2002 and 2012 in agricultural soils in Dongguan, a manufacturing center in southern China, were analyzed to determine the impact of rapid economic development on soil pollution. The level of pollution was assessed using the Nemerow synthetic pollution index (NPI), and its changing characteristics and driving forces were analyzed using multivariate statistical and geostatistical methods. The results indicate that the mean NPI was 0.79 in 2002 and 0.84 in 2012, which indicates aggravated heavy metal contamination in the agricultural soils. The concentrations of Cd and Zn increased 54.7 and 20.8 %, respectively, whereas Hg and Pb decreased 35.3 and 24.5 %, respectively. Cr, As, Cu, and Ni remained relatively stable. The Hg and Cd concentrations were highly correlated with soil types (P < 0.01), the secondary industrial output per unit of land (P < 0.01), proportion of cereal fields (P < 0.01), proportion of vegetable fields (P < 0.01), population density (P < 0.05), and road density (P < 0.05). The Pb and As concentrations were greatly influenced by soil types (P < 0.01), river density (P < 0.01), fertilizer rate (P < 0.01), and road density (P < 0.05). Cr, Zn, Cu, and Ni concentrations were primarily driven by soil types (P < 0.01), river density (P < 0.01), and fertilizer rate (P < 0.05).

Sources of variation in nitrous oxide flux from Amazonian ecosystems

NASA Technical Reports Server (NTRS)

Matson, P. A.; Vitousek, P. M.; Livingston, G. P.; Swanberg, N. A.

1990-01-01

Nitrous oxide flux and soil nutrient characteristics were measured in three undisturbed tropical ecosystem types, in cleared and burned areas, and in areas of forest converted to pasture near Manaus, Brazil. Nitrogen mineralization, nitrification, and soil nitrogen pools were high in upland forests on clay soils (terra firme) and low in the sand-type and floodplain (varzea) soils. Nitrous oxide flux followed the same pattern, with an average flux of 1.9 ng/sq cm per hr in terra firme, 0.3 in sand types, and 0.1 in varzea. Flux from recently cleared and burned areas did not differ from terra firme forest, but pastures had significantly elevated fluxes (10.3 ng/sq cm per hr). These data were combined with satellite data-based areal estimates of land cover classes to estimate total N2O-N flux from the intensive study area used by the Amazon Boundary Layer Experiment. Total N2O-N flux from the area was 22.9 kg/h; pastures covered 11 percent of the area but accounted for over 40 percent of the flux.

Installation Restoration Program, Phase II - Confirmation/Quantification Stage I, Moody Air Force Base, Georgia.

DTIC Science & Technology

1985-12-01

Confirmation/Quantification. Moody AFB- GA _____ S12. PERSONAL AUTHOR(S) .. ’ Steinberg J.A. and Thiess, W.G. 13.& TYPE OF REPORT 13b. TIME COVERED 14I. DATE...2.3.2 Soils On the high ground western portion of the base, the surface soils are mostly in the Tifton series. The soil profile consists of about 2 to...Florida Department of Environmental Regulation FWQS Florida Water Quality Standards gpd Gallons per day gpm Gallons per minute GC Gas chromatograph

[Humus composition of black soil and its organo-mineral complexes under different fertility level].

PubMed

Zhao, Lanpo; Wang, Jie; Liu, Jingshuan; Liu, Shuxia; Wang, Yanling; Wang, Hongbin; Zhang, Zhidan

2005-01-01

Determinations by Kumada method showed that with the improvement of black soil fertility, the free and combined humus contents in soil and its different size organo-mineral complexes increased, but the humification degree of free humus decreased, which was more obvious in silt and fine sand size complexes. The organic carbon content in complexes, humus extraction rate, free humus content, and humification degree of free humic acid decreased with the increasing particle size of complexes. All free humic acids in fertile soil were Rp type, while in unfertile soil, they were Rp and B type. With the increasing particle size of complexes, the type of free humic acids changed in the sequence A type (clay)-->B type (silt)-->Rp type (fine sand). Combined form humic acid mainly belonged to A type, no matter what particle size the complex was. The improvement of soil fertility could make the humification degree of free humus in soil and its complexes decrease, and furthermore, result in type change. In black soil, the type change of free humic acid mainly occurred in silt size complex, and that of combined form humic acid mainly occurred in fine sand size complex.

Physical and chemical properties of young soils of the Icelandic highlands

NASA Astrophysics Data System (ADS)

Gísladóttir, Guðrún; Mankasingh, Utra

2015-04-01

Most of the Icelandic soils are of volcanic origin, classified as andisols (carbon content 1-12%), many of which are strongly affected by erosion and so, formation of new soils is of great interest. The effect of land cover type on the weathering patterns and the formation of new soils are of interest. The southern Icelandic highlands are characterised by harsh climate, shallow soils and limited vegetation cover. We hypothesise that in the highland regions of Iceland the progression of land cover from unvegetated to vegetated sites will impact soil development. This study describes the physical and chemical properties of highland soils in Iceland. Soil samples were collected from 12 sites in September 2013, nine sites were fully vegetated and three unvegetated: grassland (G1-G8), with moss, Carex Bigelowii and dwarf shrubs, sandy fluvial wetland (S) and unvegetated gravels (M1-M3). All soils with vegetative cover were characterized by weak or structureless soil ranging in texture from loamy sand to silty clay loam, while at unvegetated sites soil texture was structureless and sandy. On average, the bulk density of soils (range 0.53 - 1.16 g cm-3) were lower at vegetated sites than unvegetated sites. The soil depth is greater in the vegetated sites, indicating greater soil development. The average % carbon (%C), % nitrogen (%N), overall % soil organic matter (%SOM), of vegetated sites were higher than for unvegetated sites, indicating the difference in soil development: vegetated sites (mean), 1.60%C, 0.10%N, 4.9%SOM; unvegetated sites (mean), 0.27%C, 0.02%N, 1.81%SOM. All soils had significant amounts of amorphous clay minerals such as allophone, imogolite, ferrihydrite or aluminium-humus complexes and also high aluminium and iron percentages, and high phosphate retention. All of which are characteristic for andisols. There were strong associations between Fe and Al and the soil C, which are indicative of Al and Fe complexed with humus or allophane and ferrihydrite clays. The allophane and ferrihydrite content was 3.5-7.7% and 2.4-5.3%, respectively. The soils in the study had a high clay content, generally greater than 10% for all soil types. However, selective dissolutions with oxalate and with pyrophosphate indicate that more organic carbon was associated with the Fe and Al of vegetated sites than observed for the vegetated sites. These results also indicate more organic associations in sites with vascular plants and mosses vs mosses only. The %C, %SOM, Fe/Al associations, soil structure and soil depth all indicate that there is gradient of increasing soil genesis form unvegetated to vegetated sites, with evidence of greater organic associations in sites with vascular plants. Even though the soils at the vegetated sites are andisols, they are still immature , while the less developed soils at the unvegetated sites are vitrisols (

[Effect of biochar addition on soil evaporation.

PubMed

Xu, Jian; Niu, Wen Quan; Zhang, Ming Zhi; Li, Yuan; Lyu, Wang; Li, Kang-Yong; Zou, Xiao-Yang; Liang, Bo-Hui

2016-11-18

In order to determine the rational amount of biochar application and its effect on soil hydrological processes in arid area, soil column experiments were conducted in the laboratory using three biochar additions (5%, 10% and 15%) and four different biochar types (d<0.25 mm bamboo charcoal, 0.25 mm

Microbial carbon recycling - an underestimated process controlling soil carbon dynamics - Part 1: A long-term laboratory incubation experiment

NASA Astrophysics Data System (ADS)

Basler, A.; Dippold, M.; Helfrich, M.; Dyckmans, J.

2015-10-01

Independent of its chemical structure carbon (C) persists in soil for several decades, controlled by stabilization and recycling. To disentangle the importance of the two factors on the turnover dynamics of soil sugars, an important compound of soil organic matter (SOM), a 3-year incubation experiment was conducted on a silty loam soil under different types of land use (arable land, grassland and forest) by adding 13C-labelled glucose. The compound-specific isotope analysis of soil sugars was used to examine the dynamics of different sugars during incubation. Sugar dynamics were dominated by a pool of high mean residence times (MRT) indicating that recycling plays an important role for sugars. However, this was not substantially affected by soil C content. Six months after label addition the contribution of the label was much higher for microbial biomass than for CO2 production for all examined land use types, corroborating that substrate recycling was very effective within the microbial biomass. Two different patterns of tracer dynamics could be identified for different sugars: while fucose and mannose showed highest label contribution at the beginning of the incubation with a subsequent slow decline, galactose and rhamnose were characterized by slow label incorporation with subsequently constant levels, which indicates that recycling is dominating the dynamics of these sugars. This may correspond to (a) different microbial growing strategies (r and K-strategist) or (b) location within or outside the cell membrane (lipopolysaccharides vs. exopolysaccharides) and thus be subject of different re-use within the microbial food web. Our results show how the microbial community recycles substrate very effectively and that high losses of substrate only occur during initial stages after substrate addition. This study indicates that recycling is one of the major processes explaining the high MRT observed for many SOM fractions and thus is crucial for understanding the global soil C cycle.

Incorporating soil variability in continental soil water modelling: a trade-off between data availability and model complexity

NASA Astrophysics Data System (ADS)

Peeters, L.; Crosbie, R. S.; Doble, R.; van Dijk, A. I. J. M.

2012-04-01

Developing a continental land surface model implies finding a balance between the complexity in representing the system processes and the availability of reliable data to drive, parameterise and calibrate the model. While a high level of process understanding at plot or catchment scales may warrant a complex model, such data is not available at the continental scale. This data sparsity is especially an issue for the Australian Water Resources Assessment system, AWRA-L, a land-surface model designed to estimate the components of the water balance for the Australian continent. This study focuses on the conceptualization and parametrization of the soil drainage process in AWRA-L. Traditionally soil drainage is simulated with Richards' equation, which is highly non-linear. As general analytic solutions are not available, this equation is usually solved numerically. In AWRA-L however, we introduce a simpler function based on simulation experiments that solve Richards' equation. In the simplified function soil drainage rate, the ratio of drainage (D) over storage (S), decreases exponentially with relative water content. This function is controlled by three parameters, the soil water storage at field capacity (SFC), the drainage fraction at field capacity (KFC) and a drainage function exponent (β). [ ] D- -S- S = KF C exp - β (1 - SFC ) To obtain spatially variable estimates of these three parameters, the Atlas of Australian Soils is used, which lists soil hydraulic properties for each soil profile type. For each soil profile type in the Atlas, 10 days of draining an initially fully saturated, freely draining soil is simulated using HYDRUS-1D. With field capacity defined as the volume of water in the soil after 1 day, the remaining parameters can be obtained by fitting the AWRA-L soil drainage function to the HYDRUS-1D results. This model conceptualisation fully exploits the data available in the Atlas of Australian Soils, without the need to solve the non-linear Richards' equation for each time-step. The spatial distribution of long term recharge and baseflow obtained with a 30 year simulation of historic data using this parameterisation, corresponds well with the spatial patterns of groundwater recharge inferred from field measurements.

Wet deposition and soil content of Beryllium - 7 in a micro-watershed of Minas Gerais (Brazil).

PubMed

Esquivel L, Alexander D; Moreira, Rubens M; Monteiro, Roberto Pellacani G; Dos Santos, Anômora A Rochido; Juri Ayub, Jimena; Valladares, Diego L

2017-04-01

Beryllium-7 ( 7 Be) is a natural radionuclide of cosmogenic origin, normally used as a tracer for several environmental processes; such as soil redistribution, sediment source discrimination, atmospheric mass transport, and trace metal scavenging from the atmosphere. In this research the content of 7 Be in soil, its seasonal variation throughout the year and its relationship with the rainfall regime in the Mato Frio creek micro-watershed was investigated, to assess its potential use in estimating soil erosion. The 7 Be content in soil shows a marked variation throughout the year. Minimum 7 Be values were observed in the dry season (from April to September) and were between 7 and 14 times higher in the rainy season (from October to March). The seasonal oscillations in 7 Be soil content could be explained by the asymmetric rainfall regime. A highly linear relationship between rainfall amount and 7 Be deposition was observed in rain water. A good agreement between 7 Be soil content and 7 Be atmospheric deposition was noticed, mainly in wet months. 7 Be penetration in soil reaches a 5 cm depth, this could be explained by the soil type in the region. The soils are Acrisol type, characterized by low pH values and clay illuviation in deeper layers of the soil. In some regions of Brazil special attention should be paid if this radionuclide will be used as soil erosion tracer, taking into account the soil origin and its particular properties. Copyright © 2017 Elsevier Ltd. All rights reserved.

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 5 2010-01-01 2010-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 5 2011-01-01 2011-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 5 2014-01-01 2014-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 5 2013-01-01 2013-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 5 2012-01-01 2012-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

Effect of Lime on characteristics of consolidation, strength, swelling and plasticity of fine grained soil

NASA Astrophysics Data System (ADS)

Estabragh, A. R.; Bordbar, A. T.; Parsaee, B.; Eskandari, Gh.

2009-04-01

Using Lime as an additive material to clayey soil is one of the best effective technique in building the soil structures to get some purposes such as soil stabilization, soil reinforcement and decreasing soil swelling. In this research the effect of Lime on geotechnical characteristics of a clayey soil was investigated. Soil specimen types used in this study were consisted of clayey soil as the control treatment and clay mixed with different weight fractions of lime, 4, 6, 8 & 10 percent. Some experiments such as CBR, atterburg limits, compaction, consolidation and swelling was conducted on specimens. Results revealed that adding lime to soil would change its physical and mechanical properties. Adding lime increase the compression strength and consolidation coefficient and decrease swelling potential and maximum dry density. According to the results, Atterburg experiments show that presence of lime in soil increase the liquid limit of low plasticity soil and decrease the liquid limit of high plasticity soil, but totally it decreases the plasticity index of soils. Key words: soil stabilization, lime, compression strength, swelling, atterburg limits, compaction

Transport of four pharmaceuticals in different horizons of three soil types

NASA Astrophysics Data System (ADS)

Kodesova, Radka; Svatkova, Paula; Klement, Ales; Jaksik, Ondrej; Golovko, Oksana; Fer, Miroslav; Kocarek, Martin; Nikodem, Antonin; Grabic, Roman

2015-04-01

Soil structure, which varies in different soil types and the horizons of these soil types, has a significant impact on water flow and contaminant transport in soils. Transport of many contaminants is in addition strongly influenced by their sorption on soil particles. Transport of four pharmaceuticals (sulfamethoxazole, trimethoprim, atenolol and carbamazepine) was studied in soil columns (a diameter of 10.5 cm and a height of 13 cm) taken from all diagnostic horizons of three different soil types (Haplic Luvisol, Greyic Phaeozem and Haplic Cambisol). The irrigation by water contaminated by a mixture of all four compounds followed by ponding infiltration of distilled water was simulated and water outflow and solute concentrations from the bottom of the soil sample was monitored in time. The highest infiltration rates were observed for soil samples from the Bt horizons of the Greyic Phaeozem that exhibited prismatic structure, followed by rates observed in the Ap horizons of the Haplic Luvisol, Greyic Phaeozem and Haplic Cambisol (due to their granular soil structure and presence of root channels). The lowest infiltration rate was measured for the Bw horizon of the Haplic Cambisol, which had a poorly developed soil structure and a low fraction of macropores. Compound discharge was however also highly affected by their sorption on solids. The highest mobility was observed for sulfamethoxazole followed by carbamazepine atenolol and trimethoprim, which corresponds to measured sorption isotherms. Mobility of ionizable compounds in different soil samples was influenced by pH (i.e. degree and form of their ionization) and sites available for absorption. Mobility of sulfamethoxazole decreased with decreasing pH (i.e. the largest sorption measured in horizons of the Haplic Cambisol). While mobility of atenolol and trimethoprim decreased with increasing base cation saturation, and with increasing organic matter content for carbamazepine. As result of both affects (i.e. soil structure and compounds' sorption) the highest discharge of all compounds was observed from the Ap horizon of the Greyic Phaeozem followed by compound discharge from the C horizons of the Greyic Phaeozem and the C and Bt2 horizons of the Haplic Luvisol. Acknowledgement: The authors acknowledge the financial support of the Czech Science Foundation (Project No. 13-12477S, Transport of pharmaceuticals in soils). References: Kodesova, R., Grabic, R., Kocarek, M., Klement, A., Golovko, O., Fer, M., Nikodem, A., Jaksik, O., Pharmaceuticals' sorptions relative to properties of thirteen different soils. Science of the Total Environment 511 (2015) 435-443.

The impact of climatic and non-climatic factors on land surface temperature in southwestern Romania

NASA Astrophysics Data System (ADS)

Roşca, Cristina Florina; Harpa, Gabriela Victoria; Croitoru, Adina-Eliza; Herbel, Ioana; Imbroane, Alexandru Mircea; Burada, Doina Cristina

2017-11-01

Land surface temperature is one of the most important parameters related to global warming. It depends mainly on soil type, discontinuous vegetation cover, or lack of precipitation. The main purpose of this paper is to investigate the relationship between high LST, synoptic conditions and air masses trajectories, vegetation cover, and soil type in one of the driest region in Romania. In order to calculate the land surface temperature and normalized difference vegetation index, five satellite images of LANDSAT missions 5 and 7, covering a period of 26 years (1986-2011), were selected, all of them collected in the month of June. The areas with low vegetation density were derived from normalized difference vegetation index, while soil types have been extracted from Corine Land Cover database. HYSPLIT application was employed to identify the air masses origin based on their backward trajectories for each of the five study cases. Pearson, logarithmic, and quadratic correlations were used to detect the relationships between land surface temperature and observed ground temperatures, as well as between land surface temperature and normalized difference vegetation index. The most important findings are: strong correlation between land surface temperature derived from satellite images and maximum ground temperature recorded in a weather station located in the area, as well as between areas with land surface temperature equal to or higher than 40.0 °C and those with lack of vegetation; the sandy soils are the most prone to high land surface temperature and lack of vegetation, followed by the chernozems and brown soils; extremely severe drought events may occur in the region.

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Chu, Rosalie K.; Toyoda, Jason

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO2. The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition.more » In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H2O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl3) mixture, or acetonitrile (ACN) and CHCl3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types.« less

Sequential extraction protocol for organic matter from soils and sediments using high resolution mass spectrometry.

PubMed

Tfaily, Malak M; Chu, Rosalie K; Toyoda, Jason; Tolić, Nikola; Robinson, Errol W; Paša-Tolić, Ljiljana; Hess, Nancy J

2017-06-15

A vast number of organic compounds are present in soil organic matter (SOM) and play an important role in the terrestrial carbon cycle, facilitate interactions between organisms, and represent a sink for atmospheric CO 2 . The diversity of different SOM compounds and their molecular characteristics is a function of the organic source material and biogeochemical history. By understanding how SOM composition changes with sources and the processes by which it is biogeochemically altered in different terrestrial ecosystems, it may be possible to predict nutrient and carbon cycling, response to system perturbations, and impact of climate change will have on SOM composition. In this study, a sequential chemical extraction procedure was developed to reveal the diversity of organic matter (OM) in different ecosystems and was compared to the previously published protocol using parallel solvent extraction (PSE). We compared six extraction methods using three sample types, peat soil, spruce forest soil and river sediment, so as to select the best method for extracting a representative fraction of organic matter from soils and sediments from a wide range of ecosystems. We estimated the extraction yield of dissolved organic carbon (DOC) by total organic carbon analysis, and measured the composition of extracted OM using high resolution mass spectrometry. This study showed that OM composition depends primarily on soil and sediment characteristics. Two sequential extraction protocols, progressing from polar to non-polar solvents, were found to provide the highest number and diversity of organic compounds extracted from the soil and sediments. Water (H 2 O) is the first solvent used for both protocols followed by either co-extraction with methanol-chloroform (MeOH-CHCl 3 ) mixture, or acetonitrile (ACN) and CHCl 3 sequentially. The sequential extraction protocol developed in this study offers improved sensitivity, and requires less sample compared to the PSE workflow where a new sample is used for each solvent type. Furthermore, a comparison of SOM composition from the different sample types revealed that our sequential protocol allows for ecosystem comparisons based on the diversity of compounds present, which in turn could provide new insights about source and processing of organic compounds in different soil and sediment types. Copyright © 2017 Elsevier B.V. All rights reserved.

Prediction of terrestrial gamma dose rate based on geological formations and soil types in the Johor State, Malaysia.

PubMed

Saleh, Muneer Aziz; Ramli, Ahmad Termizi; bin Hamzah, Khaidzir; Alajerami, Yasser; Moharib, Mohammed; Saeed, Ismael

2015-10-01

This study aims to predict and estimate unmeasured terrestrial gamma dose rate (TGDR) using statistical analysis methods to derive a model from the actual measurement based on geological formation and soil type. The measurements of TGDR were conducted in the state of Johor with a total of 3873 measured points which covered all geological formations, soil types and districts. The measurements were taken 1 m above the soil surface using NaI [Ti] detector. The measured gamma dose rates ranged from 9 nGy h(-1) to 1237 nGy h(-1) with a mean value of 151 nGy h(-1). The data have been normalized to fit a normal distribution. Tests of significance were conducted among all geological formations and soil types, using the unbalanced one way ANOVA. The results indicated strong significant differences due to the different geological formations and soil types present in Johor State. Pearson Correlation was used to measure the relations between gamma dose rate based on geological formation and soil type (D(G,S)) with the gamma dose rate based on geological formation (D(G)) or soil type (D(s)). A very good correlation was found between D(G,S) and D(G) or D(G,S) and D(s). A total of 118 pairs of geological formations and soil types were used to derive the statistical contribution of geological formations and soil types to gamma dose rates. The contribution of the gamma dose rate from geological formation and soil type were found to be 0.594 and 0.399, respectively. The null hypotheses were accepted for 83% of examined data, therefore, the model could be used to predict gamma dose rates based on geological formation and soil type information. Copyright © 2015 Elsevier Ltd. All rights reserved.

Response of runoff and soil loss to reforestation and rainfall type in red soil region of southern China.

PubMed

Huang, Zhigang; Ouyang, Zhiyun; Li, Fengrui; Zheng, Hua; Wang, Xiaoke

2010-01-01

To evaluate the long-term effects of reforestation types on soil erosion on degraded land, vegetation and soil properties under conventional sloping farmland (CSF) and three different reforestation types including a Pinus massoniana secondary forest (PSF), an Eucommia ulmoides artificial economic forest (EEF) and a natural succession type forest (NST), were investigated at runoff plot scale over a six-year period in a red soil region of southern China. One hundred and thirty erosive rainfall events generating runoff in plots were grouped into four rainfall types by means of K-mean clustering method. Erosive rainfall type I is the dominant rainfall type. The amount of runoff and the soil loss under erosive rainfall type III were the most, followed by rain-fall type II, IV and I. Compared with CSF treatment, reforestation treatments decreased the average annual runoff depth and the soil loss by 25.5%-61.8% and 93.9%-96.2% during the study period respectively. Meanwhile, runoff depth at PSF and EEF treatments was significantly lower than that in NST treatment, but no significant difference existed in soil erosion modulus among the three reforestation treatments. This is mainly due to the improved vegetation properties (i.e., vegetation coverage, biomass of above- and below-ground and litter-fall mass) and soil properties (i.e., bulk density, total porosity, infiltration rate and organic carbon content) in the three reforestation treatments compared to CSF treatment. The PSF and EEF are recommended as the preferred reforestation types to control runoff and soil erosion in the red soil region of southern China, with the NST potentially being used as an important supplement.

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce.

PubMed

Schreiter, Susanne; Ding, Guo-Chun; Heuer, Holger; Neumann, Günter; Sandmann, Martin; Grosch, Rita; Kropf, Siegfried; Smalla, Kornelia

2014-01-01

The complex and enormous diversity of microorganisms associated with plant roots is important for plant health and growth and is shaped by numerous factors. This study aimed to unravel the effects of the soil type on bacterial communities in the rhizosphere of field-grown lettuce. We used an experimental plot system with three different soil types that were stored at the same site for 10 years under the same agricultural management to reveal differences directly linked to the soil type and not influenced by other factors such as climate or cropping history. Bulk soil and rhizosphere samples were collected 3 and 7 weeks after planting. The analysis of 16S rRNA gene fragments amplified from total community DNA by denaturing gradient gel electrophoresis and pyrosequencing revealed soil type dependent differences in the bacterial community structure of the bulk soils and the corresponding rhizospheres. The rhizosphere effect differed depending on the soil type and the plant growth developmental stage. Despite the soil type dependent differences in the bacterial community composition several genera such as Sphingomonas, Rhizobium, Pseudomonas, and Variovorax were significantly increased in the rhizosphere of lettuce grown in all three soils. The number of rhizosphere responders was highest 3 weeks after planting. Interestingly, in the soil with the highest numbers of responders the highest shoot dry weights were observed. Heatmap analysis revealed that many dominant operational taxonomic units were shared among rhizosphere samples of lettuce grown in diluvial sand, alluvial loam, and loess loam and that only a subset was increased in relative abundance in the rhizosphere compared to the corresponding bulk soil. The findings of the study provide insights into the effect of soil types on the rhizosphere microbiome of lettuce.

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce

PubMed Central

Schreiter, Susanne; Ding, Guo-Chun; Heuer, Holger; Neumann, Günter; Sandmann, Martin; Grosch, Rita; Kropf, Siegfried; Smalla, Kornelia

2014-01-01

The complex and enormous diversity of microorganisms associated with plant roots is important for plant health and growth and is shaped by numerous factors. This study aimed to unravel the effects of the soil type on bacterial communities in the rhizosphere of field-grown lettuce. We used an experimental plot system with three different soil types that were stored at the same site for 10 years under the same agricultural management to reveal differences directly linked to the soil type and not influenced by other factors such as climate or cropping history. Bulk soil and rhizosphere samples were collected 3 and 7 weeks after planting. The analysis of 16S rRNA gene fragments amplified from total community DNA by denaturing gradient gel electrophoresis and pyrosequencing revealed soil type dependent differences in the bacterial community structure of the bulk soils and the corresponding rhizospheres. The rhizosphere effect differed depending on the soil type and the plant growth developmental stage. Despite the soil type dependent differences in the bacterial community composition several genera such as Sphingomonas, Rhizobium, Pseudomonas, and Variovorax were significantly increased in the rhizosphere of lettuce grown in all three soils. The number of rhizosphere responders was highest 3 weeks after planting. Interestingly, in the soil with the highest numbers of responders the highest shoot dry weights were observed. Heatmap analysis revealed that many dominant operational taxonomic units were shared among rhizosphere samples of lettuce grown in diluvial sand, alluvial loam, and loess loam and that only a subset was increased in relative abundance in the rhizosphere compared to the corresponding bulk soil. The findings of the study provide insights into the effect of soil types on the rhizosphere microbiome of lettuce. PMID:24782839

Evolving soils and hydrologic connectivity in semiarid hillslopes

NASA Astrophysics Data System (ADS)

Saco, Patricia M.

2015-04-01

Soil moisture availability is essential for the stability and resilience of semiarid ecosystems. In these ecosystems the amount of soil moisture available for vegetation growth and survival is intrinsically related to the way water is redistributed, that is from source to sink areas, and therefore prescribed by the hydrologic connectivity of the landscape. Recent studies have shown that hydrologic connectivity is highly dynamic and linked to the coevolution of geomorphic, soil and vegetation structures at a variety of spatial and temporal scales. This study investigates the effect of evolving soil depths on hydrologic connectivity using a modelling framework. The focus is on Australian semiarid hillslopes with patterned vegetation that result from coevolving landforms, soils, water redistribution, and vegetation patterns. We present and analyse results from simulations using a coupled landform evolution-dynamic vegetation model, which includes a soil depth evolution module and accounts for soil production and sediment erosion and deposition processes. We analyse the effect of soils depths on surface connectivity for a range of biotic (plant functional type strategies) and abiotic (slope and erodibility) conditions. The analysis shows that different plant functional types, through their varying facilitation strategies, have a profound effect on soils depths and therefore affect hydrologic connectivity and soil moisture patterns. This interplay becomes particularly important for systems that coevolve to have very shallow soils. In this case soil depth becomes the key factor prescribing surface connectivity and available soil moisture for plants, which affect the recovery of the system after disturbance. Conditions for the existence of threshold behaviour for which small perturbations can trigger a sudden increase in hydrologic connectivity, reduced soil moisture availability and decrease in productivity leading to degraded states are investigated. Critical implications for effective restoration efforts are discussed.

Determination and validation of soil thresholds for cadmium based on food quality standard and health risk assessment.

PubMed

Ding, Changfeng; Ma, Yibing; Li, Xiaogang; Zhang, Taolin; Wang, Xingxiang

2018-04-01

Cadmium (Cd) is an environmental toxicant with high rates of soil-plant transfer. It is essential to establish an accurate soil threshold for the implementation of soil management practices. This study takes root vegetable as an example to derive soil thresholds for Cd based on the food quality standard as well as health risk assessment using species sensitivity distribution (SSD). A soil type-specific bioconcentration factor (BCF, ratio of Cd concentration in plant to that in soil) generated from soil with a proper Cd concentration gradient was calculated and applied in the derivation of soil thresholds instead of a generic BCF value to minimize the uncertainty. The sensitivity variations of twelve root vegetable cultivars for accumulating soil Cd and the empirical soil-plant transfer model were investigated and developed in greenhouse experiments. After normalization, the hazardous concentrations from the fifth percentile of the distribution based on added Cd (HC5 add ) were calculated from the SSD curves fitted by Burr Type III distribution. The derived soil thresholds were presented as continuous or scenario criteria depending on the combination of soil pH and organic carbon content. The soil thresholds based on food quality standard were on average 0.7-fold of those based on health risk assessment, and were further validated to be reliable using independent data from field survey and published articles. The results suggested that deriving soil thresholds for Cd using SSD method is robust and also applicable to other crops as well as other trace elements that have the potential to cause health risk issues. Copyright © 2017 Elsevier B.V. All rights reserved.

The effect of soil on cork quality.

PubMed

Pestana, Miguel N; Gomes, Alberto A

2014-01-01

The present work aimed to contribute for a better knowledge regarding soil features as cork quality indicators for stoppers. Cork sampling was made in eight Cork oak stands (montados de sobreiro) located in the Plio-Plistocene sedimentary formations of Península de Setúbal in southern Tagus River region. The samples used to classify the cork as stopper for wine bottles were obtained in eight cork oak stands, covering soils of different types of sandstones of the Plio-plistocene. In each stand, we randomly chose five circular plots with 30 m radius and five trees per plot with same stripping conditions determined by: dendrometric features (HD- height stipping, PBH- perimeter at breaster height), trees vegetative condition (defoliation degree); stand features (density, percentage canopy cover); site conditions (soil type and orientation). In the center of each plot a pit was open to characterize the soil profile and to classify the soil. Cork quality for stoppers was evaluated according to porosity, pores/per cm(2) and cork boards thickness. The soil was characterized according to morphological soil profile features (lithology, soil profound, and soil horizons) and chemical soil surface horizon features (organic matter, pH, macro, and micronutrients availability). Based on the variables studied and using the numerical taxonomy, we settled relationships between the cork quality and some soil features. The results indicate: (1) high correlation between the cork caliber and boron, cation exchange capacity, total nitrogen, exchange acidity, and exchangeable magnesium, potassium, calcium, and sodium in soils of theirs cork oaks; (2) the cork porosity is correlated with the number of pores/cm(2) and magnesium soil content; (3) the other soil features have a lower correlation with the caliber, porosity, and the number of pores per cm(2).

The effect of soil on cork quality

PubMed Central

Pestana, Miguel N.; Gomes, Alberto A.

2014-01-01

The present work aimed to contribute for a better knowledge regarding soil features as cork quality indicators for stoppers. Cork sampling was made in eight Cork oak stands (montados de sobreiro) located in the Plio-Plistocene sedimentary formations of Península de Setúbal in southern Tagus River region. The samples used to classify the cork as stopper for wine bottles were obtained in eight cork oak stands, covering soils of different types of sandstones of the Plio-plistocene. In each stand, we randomly chose five circular plots with 30 m radius and five trees per plot with same stripping conditions determined by: dendrometric features (HD- height stipping, PBH- perimeter at breaster height), trees vegetative condition (defoliation degree); stand features (density, percentage canopy cover); site conditions (soil type and orientation). In the center of each plot a pit was open to characterize the soil profile and to classify the soil. Cork quality for stoppers was evaluated according to porosity, pores/per cm2 and cork boards thickness. The soil was characterized according to morphological soil profile features (lithology, soil profound, and soil horizons) and chemical soil surface horizon features (organic matter, pH, macro, and micronutrients availability). Based on the variables studied and using the numerical taxonomy, we settled relationships between the cork quality and some soil features. The results indicate: (1) high correlation between the cork caliber and boron, cation exchange capacity, total nitrogen, exchange acidity, and exchangeable magnesium, potassium, calcium, and sodium in soils of theirs cork oaks; (2) the cork porosity is correlated with the number of pores/cm2 and magnesium soil content; (3) the other soil features have a lower correlation with the caliber, porosity, and the number of pores per cm2. PMID:25353015

Potential vulnerability of southeast Alaskan wetland soil carbon stocks to climate warming

NASA Astrophysics Data System (ADS)

Fellman, J.; D'Amore, D. V.; Hood, E. W.

2015-12-01

Carbon cycling along the high latitude coastal margins of Alaska is poorly understood relative to boreal and arctic ecosystems. The perhumid coastal temperate rainforest (PCTR) of southeast Alaska has some of the densest carbon stocks (>300 Mg C ha-1) in the world but the fate of these stocks with continued warming will balance on the poorly constrained rates of carbon accumulation and loss. We quantified the rate of dissolved organic carbon (DOC) and carbon dioxide (CO2) production from four different wetland types (rich fen, poor fen, forested wetland and cedar wetland) using controlled laboratory incubations of surface (10 cm) and subsurface (25 cm) soils incubated at 8 ºC and 15 ºC for 37 weeks. This design allowed us to determine the potential vulnerability of wetland soil carbon stocks to climate warming and partition organic matter mineralization into DOC and CO2 fluxes and its controls (e.g., wetland type and temperature). Furthermore, we used fluorescence characterization of DOC and laboratory bioassays to assess how climate warming may impact the quality and bioavailability of DOC delivered to fluvial systems. Soil depth and temperature strongly influenced carbon loss in all four wetland types with the greatest CO2 fluxes observed in the rich fen and greatest DOC fluxes observed in the poor fen. Of the fluxes, CO2 was the most sensitive to incubation temperature but DOC showed more variation with wetland type. Fluxes of DOC and CO2 were positively correlated only during the last few months of the incubation suggesting strong biotic control of DOC production developed as soil organic matter decomposition progressed. Moreover, bioavailable DOC and protein-like fluorescence were greatest in the initial soil extractions but dramatically decreased over the length of the incubations. Our findings suggest that soil organic matter decomposition will increase as the PCTR continues to warm, but this response will also will vary with wetland type.

Differences in the Activities of Eight Enzymes from Ten Soil Fungi and Their Possible Influences on the Surface Structure, Functional Groups, and Element Composition of Soil Colloids

PubMed Central

Wang, Wenjie; Li, Yanhong; Wang, Huimei; Zu, Yuangang

2014-01-01

How soil fungi function in soil carbon and nutrient cycling is not well understood by using fungal enzymatic differences and their interactions with soil colloids. Eight extracellular enzymes, EEAs (chitinase, carboxymethyl cellulase, β-glucosidase, protease, acid phosphatase, polyphenol oxidase, laccase, and guaiacol oxidase) secreted by ten fungi were compared, and then the fungi that showed low and high enzymatic activity were co-cultured with soil colloids for the purpose of finding fungi-soil interactions. Some fungi (Gomphidius rutilus, Russula integra, Pholiota adiposa, and Geastrum mammosum) secreted 3–4 enzymes with weak activities, while others (Cyathus striatus, Suillus granulate, Phallus impudicus, Collybia dryophila, Agaricus sylvicola, and Lactarius deliciosus) could secret over 5 enzymes with high activities. The differences in these fungi contributed to the alterations of functional groups (stretching bands of O-H, N-H, C-H, C = O, COO- decreased by 11–60%, while P = O, C-O stretching, O-H bending and Si-O-Si stretching increased 9–22%), surface appearance (disappearance of adhesive organic materials), and elemental compositions (11–49% decreases in C1s) in soil colloids. Moreover, more evident changes were generally in high enzymatic fungi (C. striatus) compared with low enzymatic fungi (G. rutilus). Our findings indicate that inter-fungi differences in EEA types and activities might be responsible for physical and chemical changes in soil colloids (the most active component of soil matrix), highlighting the important roles of soil fungi in soil nutrient cycling and functional maintenance. PMID:25398013

Differences in the activities of eight enzymes from ten soil fungi and their possible influences on the surface structure, functional groups, and element composition of soil colloids.

PubMed

Wang, Wenjie; Li, Yanhong; Wang, Huimei; Zu, Yuangang

2014-01-01

How soil fungi function in soil carbon and nutrient cycling is not well understood by using fungal enzymatic differences and their interactions with soil colloids. Eight extracellular enzymes, EEAs (chitinase, carboxymethyl cellulase, β-glucosidase, protease, acid phosphatase, polyphenol oxidase, laccase, and guaiacol oxidase) secreted by ten fungi were compared, and then the fungi that showed low and high enzymatic activity were co-cultured with soil colloids for the purpose of finding fungi-soil interactions. Some fungi (Gomphidius rutilus, Russula integra, Pholiota adiposa, and Geastrum mammosum) secreted 3-4 enzymes with weak activities, while others (Cyathus striatus, Suillus granulate, Phallus impudicus, Collybia dryophila, Agaricus sylvicola, and Lactarius deliciosus) could secret over 5 enzymes with high activities. The differences in these fungi contributed to the alterations of functional groups (stretching bands of O-H, N-H, C-H, C = O, COO- decreased by 11-60%, while P = O, C-O stretching, O-H bending and Si-O-Si stretching increased 9-22%), surface appearance (disappearance of adhesive organic materials), and elemental compositions (11-49% decreases in C1s) in soil colloids. Moreover, more evident changes were generally in high enzymatic fungi (C. striatus) compared with low enzymatic fungi (G. rutilus). Our findings indicate that inter-fungi differences in EEA types and activities might be responsible for physical and chemical changes in soil colloids (the most active component of soil matrix), highlighting the important roles of soil fungi in soil nutrient cycling and functional maintenance.

Nutrients, heavy metals and phthalate acid esters in solar greenhouse soils in Round-Bohai Bay-Region, China: impacts of cultivation year and biogeography.

PubMed

Chen, Zhiqun; Tian, Tian; Gao, Lihong; Tian, Yongqiang

2016-07-01

Solar greenhouse is a common facility type used for horticultural crop production in China. However, most solar greenhouse fields have been degraded due to continuous cropping and excessive fertilizer use. Therefore, we investigated solar greenhouse soils covering a wide range of cultivation years and environmental conditions in Round-Bohai Bay-Region to test the effects of cultivation year and biogeography on nutrients, heavy metals, and phthalate acid esters (PAEs). In general, soil pH decreased while soil electrical conductivity (EC), organic matter (OM), total nitrogen (TN), NO3 (-)-N, NH4 (+)-N, mineral nitrogen (MN), Olsen-P, and NH4OAc-K contents increased as time of cultivation increased. However, this trend was influenced by sampling sites. Among sampling sites, Jiangsu showed a relatively low soil pH and high Olsen-P content, while Hebei showed a relatively high soil EC value, NO3 (-)-N, NH4 (+)-N, MN, and NH4OAc-K contents. Liaoning was characterized by relatively high soil OM and TN contents. The nutrient level indexes in evaluation of soil quality on Olsen-P and NH4OAc-K exceeded the standard seriously. The maximum values of the heavy metals Cd, Cu, and Zn were 4.87, 2.78, and 1.15 times higher than the threshold values, respectively. There was a rising trend on the heavy metal contents with the increasing cultivation years, and this trend was significantly influenced by sampling sites. Both Cu and Zn had relative high heavy metal indexes in evaluation of soil pollution. The PAEs were not detected in almost all sampling soils. Overall, the excessive fertilizer application was an important cause of nutrient accumulation and heavy metal pollution, resulting in soil degradation in solar greenhouses.

Effects of Soil Type on the Damage Potential of Meloidogyne incognita on Soybean.

PubMed

Windham, G L; Barker, K R

1986-07-01

Effects of soil type on the reproduction and damage potential of Meloidogyne incognita on soybean, Glycine max (L.) Merr., were determined at five locations in North Carolina, including one site where plots with six soil types were established. M. incognita reproduced readily on a susceptible soybean cultivar in most soil types, with somewhat limited reproduction in muck soils. The relationship between initial population densities and yield varied among soil types and nematode populations. Yield losses were greatest in sandy and muck soil types, with less nematode damage occurring in the clay soil types. A North Carolina and a Georgia population of M. incognita differed greatly in their ability to reproduce on soybean and suppress growth. The North Carolina population had a moderate effect on yield in 1981 and only a slight effect in 1982. In contrast, a Georgia population severely limited soybean growth and yield at lower initial population densities in 1983, Initial population densities of the nematodes and physical and chemical edaphic factors accounted for much of the variation of soybean yield and nematode reproduction.

Assessment of Bacterial bph Gene in Amazonian Dark Earth and Their Adjacent Soils

PubMed Central

Brossi, Maria Julia de Lima; Mendes, Lucas William; Germano, Mariana Gomes; Lima, Amanda Barbosa; Tsai, Siu Mui

2014-01-01

Amazonian Anthrosols are known to harbour distinct and highly diverse microbial communities. As most of the current assessments of these communities are based on taxonomic profiles, the functional gene structure of these communities, such as those responsible for key steps in the carbon cycle, mostly remain elusive. To gain insights into the diversity of catabolic genes involved in the degradation of hydrocarbons in anthropogenic horizons, we analysed the bacterial bph gene community structure, composition and abundance using T-RFLP, 454-pyrosequencing and quantitative PCR essays, respectively. Soil samples were collected in two Brazilian Amazon Dark Earth (ADE) sites and at their corresponding non-anthropogenic adjacent soils (ADJ), under two different land use systems, secondary forest (SF) and manioc cultivation (M). Redundancy analysis of T-RFLP data revealed differences in bph gene structure according to both soil type and land use. Chemical properties of ADE soils, such as high organic carbon and organic matter, as well as effective cation exchange capacity and pH, were significantly correlated with the structure of bph communities. Also, the taxonomic affiliation of bph gene sequences revealed the segregation of community composition according to the soil type. Sequences at ADE sites were mostly affiliated to aromatic hydrocarbon degraders belonging to the genera Streptomyces, Sphingomonas, Rhodococcus, Mycobacterium, Conexibacter and Burkholderia. In both land use sites, shannon's diversity indices based on the bph gene data were higher in ADE than ADJ soils. Collectively, our findings provide evidence that specific properties in ADE soils shape the structure and composition of bph communities. These results provide a basis for further investigations focusing on the bio-exploration of novel enzymes with potential use in the biotechnology/biodegradation industry. PMID:24927167

Assessment of bacterial bph gene in Amazonian dark earth and their adjacent soils.

PubMed

Brossi, Maria Julia de Lima; Mendes, Lucas William; Germano, Mariana Gomes; Lima, Amanda Barbosa; Tsai, Siu Mui

2014-01-01

Amazonian Anthrosols are known to harbour distinct and highly diverse microbial communities. As most of the current assessments of these communities are based on taxonomic profiles, the functional gene structure of these communities, such as those responsible for key steps in the carbon cycle, mostly remain elusive. To gain insights into the diversity of catabolic genes involved in the degradation of hydrocarbons in anthropogenic horizons, we analysed the bacterial bph gene community structure, composition and abundance using T-RFLP, 454-pyrosequencing and quantitative PCR essays, respectively. Soil samples were collected in two Brazilian Amazon Dark Earth (ADE) sites and at their corresponding non-anthropogenic adjacent soils (ADJ), under two different land use systems, secondary forest (SF) and manioc cultivation (M). Redundancy analysis of T-RFLP data revealed differences in bph gene structure according to both soil type and land use. Chemical properties of ADE soils, such as high organic carbon and organic matter, as well as effective cation exchange capacity and pH, were significantly correlated with the structure of bph communities. Also, the taxonomic affiliation of bph gene sequences revealed the segregation of community composition according to the soil type. Sequences at ADE sites were mostly affiliated to aromatic hydrocarbon degraders belonging to the genera Streptomyces, Sphingomonas, Rhodococcus, Mycobacterium, Conexibacter and Burkholderia. In both land use sites, shannon's diversity indices based on the bph gene data were higher in ADE than ADJ soils. Collectively, our findings provide evidence that specific properties in ADE soils shape the structure and composition of bph communities. These results provide a basis for further investigations focusing on the bio-exploration of novel enzymes with potential use in the biotechnology/biodegradation industry.

Dominant Tree Species and Soil Type Affect the Fungal Community Structure in a Boreal Peatland Forest.

PubMed

Sun, Hui; Terhonen, Eeva; Kovalchuk, Andriy; Tuovila, Hanna; Chen, Hongxin; Oghenekaro, Abbot O; Heinonsalo, Jussi; Kohler, Annegret; Kasanen, Risto; Vasander, Harri; Asiegbu, Fred O

2016-05-01

Boreal peatlands play a crucial role in global carbon cycling, acting as an important carbon reservoir. However, little information is available on how peatland microbial communities are influenced by natural variability or human-induced disturbances. In this study, we have investigated the fungal diversity and community structure of both the organic soil layer and buried wood in boreal forest soils using high-throughput sequencing of the internal transcribed spacer (ITS) region. We have also compared the fungal communities during the primary colonization of wood with those of the surrounding soils. A permutational multivariate analysis of variance (PERMANOVA) confirmed that the community composition significantly differed between soil types (P< 0.001) and tree species (P< 0.001). The distance-based linear models analysis showed that environmental variables were significantly correlated with community structure (P< 0.04). The availability of soil nutrients (Ca [P= 0.002], Fe [P= 0.003], and P [P= 0.003]) within the site was an important factor in the fungal community composition. The species richness in wood was significantly lower than in the corresponding soil (P< 0.004). The results of the molecular identification were supplemented by fruiting body surveys. Seven of the genera of Agaricomycotina identified in our surveys were among the top 20 genera observed in pyrosequencing data. Our study is the first, to our knowledge, fungal high-throughput next-generation sequencing study performed on peatlands; it further provides a baseline for the investigation of the dynamics of the fungal community in the boreal peatlands. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Dominant Tree Species and Soil Type Affect the Fungal Community Structure in a Boreal Peatland Forest

PubMed Central

Terhonen, Eeva; Kovalchuk, Andriy; Tuovila, Hanna; Chen, Hongxin; Oghenekaro, Abbot O.; Heinonsalo, Jussi; Kohler, Annegret; Kasanen, Risto; Vasander, Harri; Asiegbu, Fred O.

2016-01-01

Boreal peatlands play a crucial role in global carbon cycling, acting as an important carbon reservoir. However, little information is available on how peatland microbial communities are influenced by natural variability or human-induced disturbances. In this study, we have investigated the fungal diversity and community structure of both the organic soil layer and buried wood in boreal forest soils using high-throughput sequencing of the internal transcribed spacer (ITS) region. We have also compared the fungal communities during the primary colonization of wood with those of the surrounding soils. A permutational multivariate analysis of variance (PERMANOVA) confirmed that the community composition significantly differed between soil types (P < 0.001) and tree species (P < 0.001). The distance-based linear models analysis showed that environmental variables were significantly correlated with community structure (P < 0.04). The availability of soil nutrients (Ca [P = 0.002], Fe [P = 0.003], and P [P = 0.003]) within the site was an important factor in the fungal community composition. The species richness in wood was significantly lower than in the corresponding soil (P < 0.004). The results of the molecular identification were supplemented by fruiting body surveys. Seven of the genera of Agaricomycotina identified in our surveys were among the top 20 genera observed in pyrosequencing data. Our study is the first, to our knowledge, fungal high-throughput next-generation sequencing study performed on peatlands; it further provides a baseline for the investigation of the dynamics of the fungal community in the boreal peatlands. PMID:26896139

Plant δ15 N reflects the high landscape-scale heterogeneity of soil fertility and vegetation productivity in a Mediterranean semiarid ecosystem.

PubMed

Ruiz-Navarro, Antonio; Barberá, Gonzalo G; Albaladejo, Juan; Querejeta, José I

2016-12-01

We investigated the magnitude and drivers of spatial variability in soil and plant δ 15 N across the landscape in a topographically complex semiarid ecosystem. We hypothesized that large spatial heterogeneity in water availability, soil fertility and vegetation cover would be positively linked to high local-scale variability in δ 15 N. We measured foliar δ 15 N in three dominant plant species representing contrasting plant functional types (tree, shrub, grass) and mycorrhizal association types (ectomycorrhizal or arbuscular mycorrhizal). This allowed us to investigate whether δ 15 N responds to landscape-scale environmental heterogeneity in a consistent way across species. Leaf δ 15 N varied greatly within species across the landscape and was strongly spatially correlated among co-occurring individuals of the three species. Plant δ 15 N correlated tightly with soil δ 15 N and key measures of soil fertility, water availability and vegetation productivity, including soil nitrogen (N), organic carbon (C), plant-available phosphorus (P), water-holding capacity, topographic moisture indices and normalized difference vegetation index. Multiple regression models accounted for 62-83% of within-species variation in δ 15 N across the landscape. The tight spatial coupling and interdependence of the water, N and C cycles in drylands may allow the use of leaf δ 15 N as an integrative measure of variations in moisture availability, biogeochemical activity, soil fertility and vegetation productivity (or 'site quality') across the landscape. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Soil nitrogen dynamics in a river floodplain mosaic.

PubMed

Shrestha, J; Niklaus, P A; Frossard, E; Samaritani, E; Huber, B; Barnard, R L; Schleppi, P; Tockner, K; Luster, J

2012-01-01

In their natural state, river floodplains are heterogeneous and dynamic ecosystems that may retain and remove large quantities of nitrogen from surface waters. We compared the soil nitrogen dynamics in different types of habitat patches in a restored and a channelized section of a Thur River floodplain (northeast Switzerland). Our objective was to relate the spatiotemporal variability of selected nitrogen pools (ammonium, nitrate, microbial nitrogen), nitrogen transformations (mineralization, nitrification, denitrification), and gaseous nitrogen emission (NO) to soil properties and hydrological processes. Our study showed that soil water content and carbon availability, which depend on sedimentation and inundation dynamics, were the key factors controlling nitrogen pools and processes. High nitrogen turnover rates were measured on gravel bars, characterized by both frequent inundation and high sediment deposition rates, as well as in low-lying alluvial forest patches with a fine-textured, nutrient-rich soil where anaerobic microsites probably facilitated coupled nitrification-denitrification. In contrast, soils of the embankment in the channelized section had comparatively small inorganic nitrogen pools and low transformation rates, particularly those related to nitrate production. Environmental heterogeneity, characteristic of the restored section, favors nitrogen removal by creating sites of high sedimentation and denitrification. Of concern, however, are the locally high NO efflux and the possibility that nitrate could leach from nitrification hotspots. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

[Vertical variation in stoichiometric relationships of soil carbon, nitrogen and phosphorus in five forest types in the Maoershan region, Northeast China.

PubMed

Zhang, Tai Dong; Wang, Chuan Kuan; Zhang, Quan Zhi

2017-10-01

Five forests under diverse site conditions but under identical climate in the Maoershan region of Northeast China were sampled for measuring contents of soil carbon (C), nitrogen (N), and phosphorus (P), soil bulk density, and soil thickness by soil profile horizons. The stands included two plantations (i.e., Pinus koraiensis and Larix gmelinii plantations) and three broadleaved forests (i.e., Quercus mongolica stand, Populus davidiana Betula platyphylla mixed stand, and hardwood stand). Our aim was to examine vertical distribution of the content, density, and stoichio metry of soil C, N and P for the five forest types. The results showed that the contents and densities of soil C, N and P differed significantly among the forest types, with the maxima of the soil C and N at both O and A horizons occurring in the hardwood stand. The contents of C and N decreased significantly with increasing soil depth in all the stands. P content decreased significantly only in the broadleaved stands, and P content had no significant difference among different soil layers in the coniferous stands. The soil C/N at the A horizon, N/P at the O horizon, and the C/P at A and B horizons were significantly different among the forest types. The soil C and N linearly correlated significantly across all the forest types without significant differences in the slopes and intercepts, and the soil N and P, or the soil C and P correlated significantly only in the broadleaved stands. This result suggested that the C-N coupling relationship tended to converge across the forest types, and the N-P and C-P relationships varied with forest types.

Fe-C interactions and soil organic matter stability in two tropical soils of contrasting parent materials

NASA Astrophysics Data System (ADS)

Coward, E.; Thompson, A.; Plante, A. F.

2014-12-01

The long residence time of soil organic matter (SOM) is a dynamic property, reflecting the diversity of stabilization mechanisms active within the soil matrix. Climate and ecosystem properties act at the broadest scale, while biochemical recalcitrance, physical occlusion and mineral association drive stability at the microscale. Increasing evidence suggests that the stability of SOM is dominated by organo-mineral interactions. However, the 2:1 clays that provide much of the stabilization capacity in temperate soils are typically absent in tropical soils due to weathering. In contrast, these soils may contain an abundance of iron and aluminium oxides and oxyhydroxides, known as short-range-order (SRO) minerals. These SRO minerals are capable of SOM stabilization through adsorption or co-precipitation, a faculty largely enabled by their high specific surface area (SSA). As such, despite their relatively small mass, SRO minerals may contribute substantially to the SOM stabilization capacity of tropical soils. The objective of this work is to characterize and quantify these Fe-C interactions. Surface (0-20 cm) soil samples were taken from 20 quantitative soil pits dug within the Luquillo Critical Zone Observatory in northeast Puerto Rico. Soils were stratified across granodiorite and volcaniclastic parent materials. Four extraction procedures were used to isolate three different forms of Fe-C interactions: sodium pyrophosphate to isolate organo-metallic complexes, hydroxylamine and oxalate to isolate SRO Fe- and Al-hydroxides, and dithionite to isolate crystalline Fe-oxyhydroxides. Extracts were analysed for DOC and Fe and Al concentrations to estimate the amount of SOM associated with each mineral type. Soils were subjected to SSA and solid-phase C analyses before and after extraction to determine the contribution of the various Fe mineral types to soil SSA, and therefore to potential stabilization capacity through organo-mineral complexation. Preliminary results suggest that extracts from granodiorite parent material contain on average twice the Fe than those from volcaniclastic parent material. The removal of SRO minerals reduced SSA in both soil types, and appear to contribute substantially to SOM stabilization compared to the bulk mineral matrix.

Contrasting effects of biochar on phosphorus dynamics and bioavailability in different soil types.

PubMed

Bornø, Marie Louise; Müller-Stöver, Dorette Sophie; Liu, Fulai

2018-06-15

We investigated how two different biochars (wood biochar - WBC and straw biochar - SBC) affected P dynamics and bioavailability in five different soils differing in pH, C%, texture, Fe, Al, Ca, and Mg giving a range of soils with low (S1 and S2), intermediate (S4), and high (S3 and S5) P sorption capacities. Langmuir and Freundlich equations were fitted to the sorption data of soil and soil/biochar mixtures. P fertilizer applied to all treatments was fractioned into strongly sorbed P (qS), easily available sorbed P (qA) and solution P (c) by determining the anion exchange resin (AER)-extractable P in samples from the sorption experiment. A pot experiment was conducted to measure P uptake by maize grown in S1, S2 and S3 amended with WBC or SBC at two P fertilizer levels (0 or 70mgPkg -1 ). Only WBC could sorb P from solution partly due to a high content of calcite. SBC did not have any effect on P sorption isotherms, whereas WBC increased the P sorption in S1, S2, and S4, yet decreased P sorption in acidic soil S5. qS increased in S1, S2, and S4, and decreased in S5 in WBC treatments, whereas, qS decreased in SBC treatments in soils S2, S4, and S5. Accordingly, there was a significant interaction between soil type and biochar on maize growth and P uptake. Biochar had no effect in an alkaline soil (S3), whereas, WBC and SBC had positive effects on maize growth in slightly acidic soils S1 and S2, depending on the soil P status, however, the P uptake was lower in WBC compared to SBC treatments. Biochar and soil properties and the P status of the soil affect P bioavailability. The study provides useful information for optimizing the use of biochar in agricultural P management. Copyright © 2018 Elsevier B.V. All rights reserved.

Root Water Uptake and Soil Moisture Pattern Dynamics - Capturing Connections, Controls and Causalities

NASA Astrophysics Data System (ADS)

Blume, T.; Heidbuechel, I.; Hassler, S. K.; Simard, S.; Guntner, A.; Stewart, R. D.; Weiler, M.

2015-12-01

We hypothesize that there is a shift in controls on landscape scale soil moisture patterns when plants become active during the growing season. Especially during the summer soil moisture patterns are not only controlled by soils, topography and related abiotic site characteristics but also by root water uptake. Root water uptake influences soil moisture patterns both in the lateral and vertical direction. Plant water uptake from different soil depths is estimated based on diurnal fluctuations in soil moisture content and was investigated with a unique setup of 46 field sites in Luxemburg and 15 field sites in Germany. These sites cover a range of geologies, soils, topographic positions and types of vegetation. Vegetation types include pasture, pine forest (young and old) and different deciduous forest stands. Available data at all sites includes information at high temporal resolution from 3-5 soil moisture and soil temperature profiles, matrix potential, piezometers and sapflow sensors as well as standard climate data. At sites with access to a stream, discharge or water level is also recorded. The analysis of soil moisture patterns over time indicates a shift in regime depending on season. Depth profiles of root water uptake show strong differences between different forest stands, with maximum depths ranging between 50 and 200 cm. Temporal dynamics of signal strength within the profile furthermore suggest a locally shifting spatial distribution of root water uptake depending on water availability. We will investigate temporal thresholds (under which conditions spatial patterns of root water uptake become most distinct) as well as landscape controls on soil moisture and root water uptake dynamics.

Spatial variability of soil total and DTPA-extractable cadmium caused by long-term application of phosphate fertilizers, crop rotation, and soil characteristics.

PubMed

Jafarnejadi, A R; Sayyad, Gh; Homaee, M; Davamei, A H

2013-05-01

Increasing cadmium (Cd) accumulation in agricultural soils is undesirable due to its hazardous influences on human health. Thus, having more information on spatial variability of Cd and factors effective to increase its content on the cultivated soils is very important. Phosphate fertilizers are main contamination source of cadmium (Cd) in cultivated soils. Also, crop rotation is a critical management practice which can alter soil Cd content. This study was conducted to evaluate the effects of long-term consumption of the phosphate fertilizers, crop rotations, and soil characteristics on spatial variability of two soil Cd species (i.e., total and diethylene triamine pentaacetic acid (DTPA) extractable) in agricultural soils. The study was conducted in wheat farms of Khuzestan Province, Iran. Long-term (27-year period (1980 to 2006)) data including the rate and the type of phosphate fertilizers application, the respective area, and the rotation type of different regions were used. Afterwards, soil Cd content (total or DTPA extractable) and its spatial variability in study area (400,000 ha) were determined by sampling from soils of 255 fields. The results showed that the consumption rate of di-ammonium phosphate fertilizer have been varied enormously in the period study. The application rate of phosphorus fertilizers was very high in some subregions with have extensive agricultural activities (more than 95 kg/ha). The average and maximum contents of total Cd in the study region were obtained as 1.47 and 2.19 mg/kg and DTPA-extractable Cd as 0.084 and 0.35 mg/kg, respectively. The spatial variability of Cd indicated that total and DTPA-extractable Cd contents were over 0.8 and 0.1 mg/kg in 95 and 25 % of samples, respectively. The spherical model enjoys the best fitting and lowest error rate to appraise the Cd content. Comparing the phosphate fertilizer consumption rate with spatial variability of the soil cadmium (both total and DTPA extractable) revealed the high correlation between the consumption rate of P fertilizers and soil Cd content. Rotation type was likely the main effective factor on variations of the soil DTPA-extractable Cd contents in some parts (eastern part of study region) and could explain some Cd variation. Total Cd concentrations had significant correlation with the total neutralizing value (p < 0.01), available P (p < 0.01), cation exchange capacity (p < 0.05), and organic carbon (p < 0.05) variables. The DTPA-extractable Cd had significant correlation with OC (p < 0.01), pH, and clay content (p < 0.05). Therefore, consumption rate of the phosphate fertilizers and crop rotation are important factors on solubility and hence spatial variability of Cd content in agricultural soils.

The significance of visitors' pressure for soil status in an urban park in Tel-Aviv

NASA Astrophysics Data System (ADS)

Zhevelev, Helena; Sarah, Pariente; Oz, Atar

2010-05-01

A park is one of the most important elements of sustainable development and optimization of the urban environment. The equilibrium within the complex of natural and anthropogenic factors defines the status of a park's ecosystem. The seasonal dynamics and spatial variations of soil properties in areas under differing levels of visitors' pressure were studied in a park in Tel-Aviv. Soil was sampled twice a year, in wet (March) and dry (July) seasons, from three types of areas, subjected to differing levels of visitors' pressure: high, low and none (control). In each type of area samples were taken from two depths (0-2 cm and 5-10 cm), at 14-39 points. In total, 268 soil samples were taken. Before the soil sampling, penetration depth was determined at each point. In addition, the numbers of barbecue fires in each of the three areas were counted. Gravimetric soil moisture, organic matter, pH, electrical conductivity, and soluble ions were measured in 1:1 water extraction. Penetration depth and electrical conductivity, and organic matter, sodium, potassium and chlorite contents differed under differing levels of visitors' pressure, whereas soil moisture, pH and calcium content exhibited only minor differences. Soil moisture, electrical conductivity, and magnesium and chlorite contents exhibited strong seasonal changes, whereas the organic matter, potassium and pH levels were unaffected by seasonal dynamics. Calcium, organic matter, magnesium and chlorite contents, and electrical conductivity were significantly affected by the depth of soil sampling, whereas pH was not so affected. The seasonal changes in soil properties in the area subjected to high visitors' pressure were higher than in the one under low visitors' pressure. In most cases, visitors' pressure led to increases in variance and coefficient of variation. Different soil properties were differently affected by visitors' pressure, seasonal dynamics and soil depth. The surface of the soil was more sensitive to both seasonal dynamics and visitors' pressure, than the deeper layer. Visitors' pressure increased seasonal changes in the studied soil properties, and also increased the spatial heterogeneity of the soil. The differences in organic matter, electrical conductivity and soluble ions among the areas under differing visitors' pressure are attributed to anthropogenic additions, which accompanied the recreational activities in the urban parks: remnants of barbecue fires and meals, and excreta of urban animals. Addition of urban dust, enriched in CaCO3, minimized the effect of visitors' pressure on soil calcium content. All the above anthropogenic additions enhance the differentiation in soil layers. The notable effect of visitors' pressure on variations in soil properties highlighted its high significance for urban parks.

Using Small Unmanned Aerial Systems to Advance Hydrological Models in Coastal Watersheds

NASA Astrophysics Data System (ADS)

Moorhead, R.; Hathcock, L.; Coffey, J. J.; Hood, R. E.; van Cooten, S.; Choate, K.; Rawson, H.; Kosturock, A.

2014-12-01

Small unmanned aerial systems (sUASs) have the potential to provide highly useful information for models of earth systems that vary over time intervals of days and for which sub-meter resolution is crucial. In particular, the state of coastal watershed plains are highly dependent on vegetation type and cover, soil type, weather, river flooding, and coastal inundation. The vegetation type and cover affect the drying potential, as well as the watershed's resistance to flood water movement. The soil type, soil moisture, and pond depths affect the ability of the watershed to absorb river flood waters and inundation from the sea. In this presentation we will describe a data collection campaign and model modification effort for hydrological models in a coastal watershed. The data collection campaign is obtaining data bimonthly using multiple UASs to capture the state of the watershed quicker. In particular, the vegetation cover and the extent of the water surface expression are captured at approximately a 1 inch spatial resolution over a few days with sUASs that can image 1-2 square miles per hour. The vegetation data provides a time-varying input to improve the estimation of the roughness coefficient and the dry potential from the traditionally static datasets. By correlating the high spatio-temporal resolution surface water expression with data from approximately ten river gauges, models can be improved and validated under more conditions. The presentation will also discuss the requisite sUAS capabilities and our experience in using them.

Soil thresholds and a decision tool to manage food safety of crops grown in chlordecone polluted soil in the French West Indies.

PubMed

Clostre, Florence; Letourmy, Philippe; Lesueur-Jannoyer, Magalie

2017-04-01

Due to the persistent pollution of soils by an organochlorine, chlordecone (CLD also known as Kepone © ) in the French West Indies, some crops may be contaminated beyond the European regulatory threshold, the maximum residue limit (MRL). Farmers need to be able to foresee the risk of not complying with the regulatory threshold in each field and for each crop, if not, farmers whose fields are contaminated would have to stop cultivating certain crops in the fields concerned. To help farmers make the right choices, we studied the relationship between contamination of the soil and contamination of crops. We showed that contamination of a crop by CLD depended on the crop concerned, the soil CLD content and the type of soil. We grouped crop products in three categories: (i) non-uptakers and low-uptakers, (ii) medium-uptakers, and (iii) high-uptakers, according to their level of contamination and the resulting risk of exceeding MRL. Using a simulation model, we computed the soil threshold required to ensure the risk of not complying with MRL was sufficiently low for each crop product and soil type. Threshold values ranged from 0.02 μgkg -1 for dasheen grown in nitisol to 1.7 μgkg -1 for yam grown in andosol in the high-uptake category, and from 1 μgkg -1 for lettuce grown in nitisol to 45 μgkg -1 for the leaves of spring onions grown in andosol in the medium-uptake category. Contamination of non-uptakers and low-uptakers did not depend on soil contamination. With these results, we built an easy-to-use decision support tool based on two soil thresholds (0.1 and 1 μgkg -1 ) to enable growers to adapt their cropping system and hence to be able to continue farming. Copyright © 2017 Elsevier Ltd. All rights reserved.

Spatial and temporal anomalies of soil gas in northern Taiwan and its tectonic and seismic implications

NASA Astrophysics Data System (ADS)

Fu, Ching-Chou; Yang, Tsanyao Frank; Chen, Cheng-Hong; Lee, Lou-Chuang; Wu, Yih-Min; Liu, Tsung-Kwei; Walia, Vivek; Kumar, Arvind; Lai, Tzu-Hua

2017-11-01

In this paper, we study (1) the spatial anomalies and (2) the temporal anomalies of soil gas in northern Taiwan. The spatial anomalies of soil gas are related to tectonic faults, while the temporal anomalies of soil gas are associated with pre-earthquake activities. Detailed soil gas sampling was systematically performed, and the analysis of the collected gas species shows that high helium and nitrogen concentrations appear in samples from specific sites, which coincide with the structural setting of the area studied. This analysis indicates the possibility of using these soil gases to determine fault zones in the studied area. Based on the soil gas data, a station (Tapingti) for automatic soil gas monitoring was constructed on an appropriate site at the fault zone. Some anomalous high radon concentrations at certain times can be identified from the dataset, which was generated by the continuous monitoring of soil gas for over a year. Notably, many of these anomalies were observed several hours to a few days before the earthquakes (ML > 3) that occurred in northern Taiwan. By combining the information of epicenters and fault plane solutions of these earthquakes, we find that the shallow earthquakes (<15 km) were mainly strike-slip and normal-type earthquakes, and concentrated within a distance of 30 km to the monitoring site (Group A). The deep earthquakes (>20 km) were mainly thrust-type earthquakes and distributed in greater distances (>45 km) east of the monitoring site (Group B). Such focal mechanisms of earthquakes suggest an extensional and compressional structural domain in the continental crust for Group A and Group B earthquakes, respectively. It is suggested that the pre-earthquake activities associated with the seismicity of Group B may be transmitted along the major decollement in the region below the Tapingti station, leading to the observed soil gas enhancements.

Effects of soil type and light on height growth, biomass partitioning, and nitrogen dynamics on 22 species of tropical dry forest tree seedlings: Comparisons between legumes and nonlegumes.

PubMed

Smith-Martin, Christina M; Gei, Maria G; Bergstrom, Ellie; Becklund, Kristen K; Becknell, Justin M; Waring, Bonnie G; Werden, Leland K; Powers, Jennifer S

2017-03-01

The seedling stage is particularly vulnerable to resource limitation, with potential consequences for community composition. We investigated how light and soil variation affected early growth, biomass partitioning, morphology, and physiology of 22 tree species common in tropical dry forest, including eight legumes. Our hypothesis was that legume seedlings are better at taking advantage of increased resource availability, which contributes to their successful regeneration in tropical dry forests. We grew seedlings in a full-factorial design under two light levels in two soil types that differed in nutrient concentrations and soil moisture. We measured height biweekly and, at final harvest, biomass partitioning, internode segments, leaf carbon, nitrogen, δ 13 C, and δ 15 N. Legumes initially grew taller and maintained that height advantage over time under all experimental conditions. Legumes also had the highest final total biomass and water-use efficiency in the high-light and high-resource soil. For nitrogen-fixing legumes, the amount of nitrogen derived from fixation was highest in the richer soil. Although seed mass tended to be larger in legumes, seed size alone did not account for all the differences between legumes and nonlegumes. Both belowground and aboveground resources were limiting to early seedling growth and function. Legumes may have a different regeneration niche, in that they germinate rapidly and grow taller than other species immediately after germination, maximizing their performance when light and belowground resources are readily available, and potentially permitting them to take advantage of high light, nutrient, and water availability at the beginning of the wet season. © 2017 Botanical Society of America.

Temporal dynamics of the compositions and activities of soil microbial communities post-application of the insecticide chlorantraniliprole in paddy soils.

PubMed

Wu, Meng; Liu, Jia; Li, Weitao; Liu, Ming; Jiang, Chunyu; Li, Zhongpei

2017-10-01

Chlorantraniliprole (CAP) is a newly developed insecticide widely used in rice fields in China. There has been few studies evaluating the toxicological effects of CAP on soil-associated microbes. An 85-day microcosm experiment was performed to reveal the dissipation dynamics of CAP in three types of paddy soils in subtropical China. The effects of CAP on microbial activities (microbial biomass carbon-MBC, basal soil respiration-BSR, microbial metabolic quotient-qCO 2 , acid phosphatase and sucrose invertase activities) in the soils were periodically evaluated. Microbial phospholipid fatty acid (PLFA) analysis was used to evaluate the change of soil microbial community composition on day 14 and 50 of the experiment. CAP residues were extracted using the quick, easy, cheap, effective, rugged, and safe (QuChERS) method and quantification was measured by high performance liquid chromatography (HPLC). The half-lives (DT 50 ) of CAP were in the range of 41.0-53.0 days in the three soils. The results showed that CAP did not impart negative effects on MBC during the incubation. CAP inhibited BSR, qCO 2 , acid phosphatase and sucrose invertase activities in the first 14 days of incubation in all the soils. After day 14, the soil microbial parameters of CAP-treated soils became statistically at par with their controls. Principal component analysis (PCA) determining abundance of biomarker PLFAs indicated that the application of CAP significantly changed the compositions of microbial communities in all three paddy soils on day 14 but the compositions of soil microbial communities recovered by day 50. This study indicates that CAP does not ultimately impair microbial activities and microbial compositions of these three paddy soil types. Copyright © 2017 Elsevier Inc. All rights reserved.

Forms of organic phosphorus in wetland soils

NASA Astrophysics Data System (ADS)

Cheesman, A. W.; Turner, B. L.; Reddy, K. R.

2014-12-01

Phosphorus (P) cycling in freshwater wetlands is dominated by biological mechanisms, yet there has been no comprehensive examination of the forms of biogenic P (i.e., forms derived from biological activity) in wetland soils. We used solution 31P NMR spectroscopy to identify and quantify P forms in surface soils of 28 palustrine wetlands spanning a range of climatic, hydrogeomorphic, and vegetation types. Total P concentrations ranged between 51 and 3516 μg P g-1, of which an average of 58% was extracted in a single-step NaOH-EDTA procedure. The extracts contained a broad range of P forms, including phosphomonoesters (averaging 24% of the total soil P), phosphodiesters (averaging 10% of total P), phosphonates (up to 4% of total P), and both pyrophosphate and long-chain polyphosphates (together averaging 6% of total P). Soil P composition was found to be dependant upon two key biogeochemical properties: organic matter content and pH. For example, stereoisomers of inositol hexakisphosphate were detected exclusively in acidic soils with high mineral content, while phosphonates were detected in soils from a broad range of vegetation and hydrogeomorphic types but only under acidic conditions. Conversely inorganic polyphosphates occurred in a broad range of wetland soils, and their abundance appears to reflect more broadly that of a "substantial" and presumably active microbial community with a significant relationship between total inorganic polyphosphates and microbial biomass P. We conclude that soil P composition varies markedly among freshwater wetlands but can be predicted by fundamental soil properties.

Forms of organic phosphorus in wetland soils

NASA Astrophysics Data System (ADS)

Cheesman, A. W.; Turner, B. L.; Reddy, K. R.

2014-06-01

Phosphorus (P) cycling in freshwater wetlands is dominated by biological mechanisms, yet there has been no comprehensive examination of the forms of biogenic P (i.e. forms derived from biological activity) in wetland soils. We used solution 31P NMR spectroscopy to identify and quantify P forms in surface soils of 28 palustrine wetlands spanning a range of climatic, hydro-geomorphic and vegetation types. Total P concentrations ranged between 51 and 3516 μg P g

Shifts in indigenous microbial communities during the anaerobic degradation of pentachlorophenol in upland and paddy soils from southern China.

PubMed

Chen, Yating; Tao, Liang; Wu, Ke; Wang, Yongkui

2016-11-01

Pentachlorophenol (PCP) is a common persistent pesticide in soil that has generated a significant environmental problem worldwide. Therefore, anaerobic degradation of PCP by the soil indigenous microbial community has gained increasing attention. However, little information is available concerning the functional microorganisms and the potential shifts in the microbial community associated with PCP degradation. In this study, we conducted a set of experiments to determine which components of the indigenous microbial community were capable of degrading PCP in soils of two land use types (upland and paddy soils) in southern China. Our results showed that the PCP degradation rate was significantly higher in paddy soils than that in upland soils. 16S ribosomal RNA (rRNA) high-throughput sequencing revealed significant differences in microbial taxonomic composition between the soil with PCP and blank (soil without PCP) with Acinetobacter, Clostridium, Coprococcus, Oxobacter, and Sedimentibacter dominating the PCP-affected communities. Acinetobacter was also apparently enriched in the paddy soils with PCP (up to 52.2 %) indicated this genus is likely to play an important role in PCP degradation. Additionally, the Fe(III)-reducing bacteria Clostridium may also be involved in PCP degradation. Our data further revealed hitherto unknown metabolisms of potential PCP degradation by microorganisms including Coprococcus, Oxobacter, and Ruminiclostridium. Overall, these findings indicated that land use types may affect the PCP anaerobic degradation rate via the activities of indigenous bacterial populations and extend our knowledge of the bacterial populations responsible for PCP degradation.

Selective Separation and Determination of Heavy Metals (Cd, Pb, Cr) Speciation Forms from Hortic Antrosols

NASA Astrophysics Data System (ADS)

Bulgariu, D.; Bulgariu, L.

2009-04-01

The speciation, inter-phases distribution and biodisponibility of heavy metals in soils represent one of main problem of environmental geochemistry and agro-chemistry. This problem is very important in case of hortic antrosols (soils from glasshouses) for the elimination of agricultural products (fruits, vegetables) contamination with heavy metals. In soils from glass houses, the speciation and inter-phases distribution processes of heavy metals have a particular dynamic, different in comparison with those from non-protected soils. The predominant distribution forms of heavy metals in such soils types are: complexes with low mass organic molecules, organic-mineral complexes, complexes with inorganic ligands (hydroxide-complexes, carbonate-complexes, sulphate-complexes, etc.) and basic salts. All of these have high stabilities in conditions of soils from glass houses, and in consequence, the separation and determination of speciation forms (which is directly connected with biodisponibility of heavy metals) by usual methods id very difficult and has a high uncertain degree. In this study is presented an original method for the selective separation and differentiation of speciation forms of heavy metals from glass houses soils, which is based by the combination of solid-liquid sequential extraction (SPE) with the extraction in aqueous polymer-inorganic salt two-phase systems (ABS). The soil samples used for this study have been sampled from three different locations (glass houses from Iasi, Barlad and Bacau - Romania) where the vegetables cultivation have bee performed by three different technologies. In this way was estimated the applicability and the analytical limits of method proposed by as, in function of the chemical-mineralogical and physical-chemical characteristics of soils. As heavy metals have been studied cadmium, lead and chromium, all being known for their high toxicity. The procedure used for the selective separation and differentiation of speciation forms of heavy metals from glass houses soils has two main steps: (i) non-destructive separation of chemical-mineralogical associations and aggregates from soils samples - for this the separation method with heavy liquids (bromophorme) and isodynamic magnetic method have been used; (ii) sequential extraction of heavy metals from soil fractions separated in the first step, by using combined SPE-ABS procedure. For the preparation of combined extraction systems was used polyethylene glycol (with different molecular mass: 2000, 4000 and 8000). As phase-forming inorganic salts and as selective extracting agents we have used different usual inorganic reagents. The type and concentration of phase-forming salts have been selected in function of, both nature of extracted heavy metals and chemical-mineralogical characteristics of soil samples. The experimental parameters investigated in this study are: molecular mass of polyethylene glycol and the concentration of polymeric solutions, nature and concentration of phase-forming salts, nature and concentration of extracting agents, pH in extraction system phase, type of extracted heavy metals, type of speciation forms of heavy metals and their concentrations. All these factors can influence significantly the efficiency and the selectivity of separation process. The experimental results have indicate that the combined SPE-ABS extraction systems have better separation efficiency, in comparison with traditional SPE systems and ca realized a accurate discrimination between speciation forms of heavy metals from soils. Under these conditions, the estimation of inter-phases distribution and biodisponibility of heavy metals has a high precision. On the other hand, when the combined SPE-ABS systems are used, the concomitant extraction of the elements from the same geochemical association with studied heavy metals (inevitable phenomena in case of separation by SPE procedures) is significant diminished. This increases the separation selectivity and facilitated the more accurate determination of speciation forms concentration. By adequate selection of extraction conditions can be realized the selective separation of organic-mineral complexes, which will permit to perform detailed studies about the structure and chemical composition of these. Acknowledgments The authors would like to acknowledge the financial support from Romanian Ministry of Education and Research (Project PNCDI 2-D5 no. 51045/07).

Biochar from "Kon Tiki" flame curtain and other kilns: Effects of nutrient enrichment and kiln type on crop yield and soil chemistry

PubMed Central

Pandit, Naba Raj; Mulder, Jan; Hale, Sarah Elisabeth; Schmidt, Hans Peter

2017-01-01

Biochar application to soils has been investigated as a means of improving soil fertility and mitigating climate change through soil carbon sequestration. In the present work, the invasive shrub "Eupatorium adenophorum" was utilized as a sustainable feedstock for making biochar under different pyrolysis conditions in Nepal. Biochar was produced using several different types of kilns; four sub types of flame curtain kilns (deep-cone metal kiln, steel shielded soil pit, conical soil pit and steel small cone), brick-made traditional kiln, traditional earth-mound kiln and top lift up draft (TLUD). The resultant biochars showed consistent pH (9.1 ± 0.3), cation exchange capacities (133 ± 37 cmolc kg-1), organic carbon contents (73.9 ± 6.4%) and surface areas (35 to 215 m2/g) for all kiln types. A pot trial with maize was carried out to investigate the effect on maize biomass production of the biochars made with various kilns, applied at 1% and 4% dosages. Biochars were either pretreated with hot or cold mineral nutrient enrichment (mixing with a nutrient solution before or after cooling down, respectively), or added separately from the same nutrient dosages to the soil. Significantly higher CEC (P< 0.05), lower Al/Ca ratios (P< 0.05), and high OC% (P<0.001) were observed for both dosages of biochar as compared to non-amended control soils. Importantly, the study showed that biochar made by flame curtain kilns resulted in the same agronomic effect as biochar made by the other kilns (P > 0.05). At a dosage of 1% biochar, the hot nutrient-enriched biochar led to significant increases of 153% in above ground biomass production compared to cold nutrient-enriched biochar and 209% compared to biochar added separately from the nutrients. Liquid nutrient enhancement of biochar thus improved fertilizer effectiveness compared to separate application of biochar and fertilizer. PMID:28448621

Biochar from "Kon Tiki" flame curtain and other kilns: Effects of nutrient enrichment and kiln type on crop yield and soil chemistry.

PubMed

Pandit, Naba Raj; Mulder, Jan; Hale, Sarah Elisabeth; Schmidt, Hans Peter; Cornelissen, Gerard

2017-01-01

Biochar application to soils has been investigated as a means of improving soil fertility and mitigating climate change through soil carbon sequestration. In the present work, the invasive shrub "Eupatorium adenophorum" was utilized as a sustainable feedstock for making biochar under different pyrolysis conditions in Nepal. Biochar was produced using several different types of kilns; four sub types of flame curtain kilns (deep-cone metal kiln, steel shielded soil pit, conical soil pit and steel small cone), brick-made traditional kiln, traditional earth-mound kiln and top lift up draft (TLUD). The resultant biochars showed consistent pH (9.1 ± 0.3), cation exchange capacities (133 ± 37 cmolc kg-1), organic carbon contents (73.9 ± 6.4%) and surface areas (35 to 215 m2/g) for all kiln types. A pot trial with maize was carried out to investigate the effect on maize biomass production of the biochars made with various kilns, applied at 1% and 4% dosages. Biochars were either pretreated with hot or cold mineral nutrient enrichment (mixing with a nutrient solution before or after cooling down, respectively), or added separately from the same nutrient dosages to the soil. Significantly higher CEC (P< 0.05), lower Al/Ca ratios (P< 0.05), and high OC% (P<0.001) were observed for both dosages of biochar as compared to non-amended control soils. Importantly, the study showed that biochar made by flame curtain kilns resulted in the same agronomic effect as biochar made by the other kilns (P > 0.05). At a dosage of 1% biochar, the hot nutrient-enriched biochar led to significant increases of 153% in above ground biomass production compared to cold nutrient-enriched biochar and 209% compared to biochar added separately from the nutrients. Liquid nutrient enhancement of biochar thus improved fertilizer effectiveness compared to separate application of biochar and fertilizer.

Effects of Biosolid Soil Amendment on Heterodera glycines Populations

PubMed Central

Melakeberhan, H; Noel, G. R.

2006-01-01

The high degree of parasitic variability in Heterodera glycines and its distribution in a wide range of soybean production systems present multiple challenges for management, which necessitate increased understanding of the biology of H. glycines. Soil amendments are being considered either as stand-alone and/or as part of integrated management approaches. A recycled municipal biosolid with nutrition supplement and liming qualities, N-Viro Soil (NVS) has potential as a multi-purpose soil amendment. In three greenhouse experiments, the effects of 0, 1.0 or 4.0 g NVS/100 cm3 of sandy loam soil on three H. glycines populations (GN1, GN2 and GN3) were investigated on soybean grown for 557 ± 68 degree-days (base 10°C). The response of the three H. glycines populations to NVS treatment varied by experiment. The overall numbers of preadult stages and cysts generally decreased with increasing levels of NVS in all experiments, and the high rate was more effective than the low rate in suppressing H. glycines numbers. This suggests that the high NVS treatment can affect the three populations in the experimental soil type under controlled conditions. Field studies to determine efficacy of the soil amendment in a wide range of environments should be initiated. PMID:19259540

Soil organic matter content effects on dermal pesticide bioconcentration in American toads (Bufo americanus).

PubMed

Van Meter, Robin J; Glinski, Donna A; Henderson, W Matthew; Purucker, S Thomas

2016-11-01

Pesticides have been implicated as a major factor in global amphibian declines and may pose great risk to terrestrial phase amphibians moving to and from breeding ponds on agricultural landscapes. Dermal uptake from soil is known to occur in amphibians, but predicting pesticide availability and bioconcentration across soil types is not well understood. The present study was designed to compare uptake of 5 current-use pesticides (imidacloprid, atrazine, triadimefon, fipronil, and pendimethalin) in American toads (Bufo americanus) from exposure on soils with significant organic matter content differences (14.1% = high organic matter and 3.1% = low organic matter). We placed toads on high- or low-organic matter soil after applying individual current-use pesticides on the soil surface for an 8-h exposure duration. Whole body tissue homogenates and soils were extracted and analyzed using liquid chromatography-mass spectrometry to determine pesticide tissue and soil concentration, as well as bioconcentration factor in toads. Tissue concentrations were greater on the low-organic matter soil than the high-organic matter soil across all pesticides (average ± standard error; 1.23 ± 0.35 ppm and 0.78 ± 0.23 ppm, respectively), and bioconcentration was significantly higher for toads on the low-organic matter soil (analysis of covariance p = 0.002). Soil organic matter is known to play a significant role in the mobility of pesticides and bioavailability to living organisms. Agricultural soils typically have relatively lower organic matter content and serve as a functional habitat for amphibians. The potential for pesticide accumulation in amphibians moving throughout agricultural landscapes may be greater and should be considered in conservation and policy efforts. Environ Toxicol Chem 2016;35:2734-2741. © 2016 SETAC. © 2016 SETAC.

The Response of Soil Carbon Stocks to Changing Atmospheric Carbon Dioxide Concentrations are Soil-Type-Dependent

NASA Astrophysics Data System (ADS)

Hockaday, W. C.; Gallagher, M. E.; Masiello, C. A.; Pyle, L. A.; Polley, W. H.; Baldock, J.

2010-12-01

Global soil C stocks (2 × 1018 gC) are large enough that a minor climate-induced change in the cycling of the soil C pool would constitute a major climate feedback. The responses of soil carbon stocks to experimental manipulations of atmospheric carbon dioxide concentration ([CO2]) and temperature vary widely in direction and magnitude across different ecosystems. The mechanisms for differences soil C cycle response to climate change are not well understood. In particular, little is known about the potential role of soil genetic factors such as mineralogy and structure in the climate response. To address this, we examined [CO2]-induced changes in soil organic matter (SOM) quantity and quality at the USDA lysimeter CO2 gradient facility (in Temple, TX), which comprises 3 major soil orders (Mollisol, Alfisol, and Vertisol). Temperature, precipitation, and vegetation type are controlled variables across the soil orders. We used 13C nuclear magnetic resonance to study the chemical structure and composition of SOM under a native tallgrass prairie community exposed to CO2 concentrations ranging from 250 to 500 ppm. A mixing model (Baldock et al., 2004) was used to estimate soil biochemical stocks. The relative magnitude of biochemical inputs (from grassland roots and shoots) follows the order: carbohydrates >> lignins > proteins = lipids. However, the relative chemical abundances in the soil C pool are: carbohydrates = protein > lipid > lignin > charcoal. These discrepancies in the relative magnitude of the biochemical fluxes and stocks highlight the selectivity of SOM preservation and show that increased primary production (mainly carbohydrate synthesis) in response to elevated [CO2] may not lead to long-term soil C storage unless a carbohydrate preservation mechanism exists in the soil. Indeed, carbohydrate stocks in the Alfisol and Vertisol decreased despite greater inputs at high [CO2]. Only the Mollisol exhibited a capacity to store additional carbohydrate C at high atmospheric CO2 levels. Soil protein stocks in the Mollisol, and lignin stocks in the Alfisol, doubled in response to the doubling of atmospheric [CO2]. Soil lipids decreased with increasing [CO2] in all 3 soil orders. These [CO2]-induced changes in the soil biochemical stocks suggest that soil genetic factors could play an important role in the soil C storage potential under different climate regimes. The molecular basis for C preservation in soils of distinct genetic origin should inform efforts to model C cycle-climate feedbacks.

Filter Membrane Effects on Water-Extractable Phosphorus Concentrations from Soil.

PubMed

Norby, Jessica; Strawn, Daniel; Brooks, Erin

2018-03-01

To accurately assess P concentrations in soil extracts, standard laboratory practices for monitoring P concentrations are needed. Water-extractable P is a common analytical test to determine P availability for leaching from soils, and it is used to determine best management practices. Most P analytical tests require filtration through a filter membrane with 0.45-μm pore size to distinguish between particulate and dissolved P species. However, filter membrane type is rarely specified in method protocols, and many different types of membranes are available. In this study, three common filter membrane materials (polyether sulfone, nylon, and nitrocellulose), all with 0.45-μm pore sizes, were tested for analytical differences in total P concentrations and dissolved reactive P (DRP) concentrations in water extracts from six soils sampled from two regions. Three of the extracts from the six soil samples had different total P concentrations for all three membrane types. The other three soil extracts had significantly different total P results from at least one filter membrane type. Total P concentration differences were as great as 35%. The DRP concentrations in the extracts were dependent on filter type in five of the six soil types. Results from this research show that filter membrane type is an important parameter that affects concentrations of total P and DRP from soil extracts. Thus, membrane type should be specified in soil extraction protocols. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

The influences of four types of soil on the growth, physiological and biochemical characteristics of Lycoris aurea (L’ Her.) Herb

PubMed Central

Quan, Miaohua; Liang, Juan

2017-01-01

Based on the characteristics of Lycoris aurea (L. aurea) natural distribution and local soil types, we selected four representative types of soil, including humus soil, sandy soil, garden soil and yellow-brown soil, for conducting the cultivation experiments to investigate key soil factors influencing its growth and development and to select the soil types suitable for cultivating it. We found that there existed significant differences in the contents of mineral elements and the activities of soil enzymes (urease, phosphatase, sucrase and catalase) etc. Among which, the contents of organic matters, alkali-hydrolysable nitrogen, Ca and Mg as well as the activities of soil enzymes in humus soil were the highest ones. In yellow-brown soil, except for Fe, the values of all the other items were the lowest ones. Net photosynthetic rate (Pn), biomass and lycorine content in humus soil were all the highest ones, which were increased by 31.02, 69.39 and 55.79%, respectively, as compared to those of yellow-brown soil. Stepwise multiple regression analysis and path analysis indicated that alkali-hydrolysable nitrogen, and Ca etc. were key soil factors influencing Pn, biomass and lycorine content of L. aurea. Thus, humus soil can be used as medium suitable for artificial cultivation of L. aurea. PMID:28240308

The influences of four types of soil on the growth, physiological and biochemical characteristics of Lycoris aurea (L' Her.) Herb.

PubMed

Quan, Miaohua; Liang, Juan

2017-02-27

Based on the characteristics of Lycoris aurea (L. aurea) natural distribution and local soil types, we selected four representative types of soil, including humus soil, sandy soil, garden soil and yellow-brown soil, for conducting the cultivation experiments to investigate key soil factors influencing its growth and development and to select the soil types suitable for cultivating it. We found that there existed significant differences in the contents of mineral elements and the activities of soil enzymes (urease, phosphatase, sucrase and catalase) etc. Among which, the contents of organic matters, alkali-hydrolysable nitrogen, Ca and Mg as well as the activities of soil enzymes in humus soil were the highest ones. In yellow-brown soil, except for Fe, the values of all the other items were the lowest ones. Net photosynthetic rate (P n ), biomass and lycorine content in humus soil were all the highest ones, which were increased by 31.02, 69.39 and 55.79%, respectively, as compared to those of yellow-brown soil. Stepwise multiple regression analysis and path analysis indicated that alkali-hydrolysable nitrogen, and Ca etc. were key soil factors influencing P n , biomass and lycorine content of L. aurea. Thus, humus soil can be used as medium suitable for artificial cultivation of L. aurea.

Dryland soil microbial communities display spatial biogeographic patterns associated with soil depth and soil parent material

USGS Publications Warehouse

Steven, Blaire; Gallegos-Graves, La Verne; Belnap, Jayne; Kuske, Cheryl R.

2013-01-01

Biological soil crusts (biocrusts) are common to drylands worldwide. We employed replicated, spatially nested sampling and 16S rRNA gene sequencing to describe the soil microbial communities in three soils derived from different parent material (sandstone, shale, and gypsum). For each soil type, two depths (biocrusts, 0–1 cm; below-crust soils, 2–5 cm) and two horizontal spatial scales (15 cm and 5 m) were sampled. In all three soils, Cyanobacteria and Proteobacteria demonstrated significantly higher relative abundance in the biocrusts, while Chloroflexi and Archaea were significantly enriched in the below-crust soils. Biomass and diversity of the communities in biocrusts or below-crust soils did not differ with soil type. However, biocrusts on gypsum soil harbored significantly larger populations of Actinobacteria and Proteobacteria and lower populations of Cyanobacteria. Numerically dominant operational taxonomic units (OTU; 97% sequence identity) in the biocrusts were conserved across the soil types, whereas two dominant OTUs in the below-crust sand and shale soils were not identified in the gypsum soil. The uniformity with which small-scale vertical community differences are maintained across larger horizontal spatial scales and soil types is a feature of dryland ecosystems that should be considered when designing management plans and determining the response of biocrusts to environmental disturbances.

The greenhouse gas balance of a drained fen peatland is mainly controlled by land-use rather than soil organic carbon content

NASA Astrophysics Data System (ADS)

Eickenscheidt, T.; Heinichen, J.; Drösler, M.

2015-09-01

Drained organic soils are considered to be hotspots for greenhouse gas (GHG) emissions. Arable lands and intensively used grasslands, in particular, have been regarded as the main producers of carbon dioxide (CO2) and nitrous oxide (N2O). However, GHG balances of former peatlands and associated organic soils not considered to be peatland according to the definition of the Intergovernmental Panel on Climate Change (IPCC) have not been investigated so far. Therefore, our study addressed the question to what extent the soil organic carbon (SOC) content affects the GHG release of drained organic soils under two different land-use types (arable land and intensively used grassland). Both land-use types were established on a Mollic Gleysol (labeled Cmedium) as well as on a Sapric Histosol (labeled Chigh). The two soil types differed significantly in their SOC contents in the topsoil (Cmedium: 9.4-10.9 % SOC; Chigh: 16.1-17.2 % SOC). We determined GHG fluxes over a period of 1 or 2 years in case of N2O or methane (CH4) and CO2, respectively. The daily and annual net ecosystem exchange (NEE) of CO2 was determined by measuring NEE and the ecosystem respiration (RECO) with the closed dynamic chamber technique and by modeling the RECO and the gross primary production (GPP). N2O and CH4 were measured with the static closed chamber technique. Estimated NEE of CO2 differed significantly between the two land-use types, with lower NEE values (-6 to 1707 g CO2-C m-2 yr-1) at the arable sites and higher values (1354 to 1823 g CO2-C m-2 yr-1) at the grassland sites. No effect on NEE was found regarding the SOC content. Significantly higher annual N2O exchange rates were observed at the arable sites (0.23-0.86 g N m-2 yr-1) than at the grassland sites (0.12-0.31 g N m-2 yr-1). Furthermore, N2O fluxes from the Chigh sites significantly exceeded those of the Cmedium sites. CH4 fluxes were found to be close to zero at all plots. Estimated global warming potential, calculated for a time horizon of 100 years (GWP100) revealed a very high release of GHGs from all plots ranging from 1837 to 7095 g CO2 eq. m-2 yr-1. Calculated global warming potential (GWP) values did not differ between soil types and partly exceeded the IPCC default emission factors of the Tier 1 approach by far. However, despite being subject to high uncertainties, the results clearly highlight the importance of adjusting the IPCC guidelines for organic soils not falling under the definition in order to avoid a significant underestimation of GHG emissions in the corresponding sectors of the national climate reporting. Furthermore, the present results revealed that mainly the type of land-use, including the management type, and not the SOC content is responsible for the height of GHG exchange from intensive farming on drained organic soils.

Mercury contamination in agricultural soils from abandoned metal mines classified by geology and mineralization.

PubMed

Kim, Han Sik; Jung, Myung Chae

2012-01-01

This survey aimed to compare mercury concentrations in soils related to geology and mineralization types of mines. A total of 16,386 surface soils (0~15 cm in depth) were taken from agricultural lands near 343 abandoned mines (within 2 km from each mine) and analyzed for Hg by AAS with a hydride-generation device. To meaningfully compare mercury levels in soils with geology and mineralization types, three subclassification criteria were adapted: (1) five mineralization types, (2) four valuable ore mineral types, and (3) four parent rock types. The average concentration of Hg in all soils was 0.204 mg kg(-1) with a range of 0.002-24.07 mg kg(-1). Based on the mineralization types, average Hg concentrations (mg kg(-1)) in the soils decreased in the order of pegmatite (0.250) > hydrothermal vein (0.208) > hydrothermal replacement (0.166) > skarn (0.121) > sedimentary deposits (0.045). In terms of the valuable ore mineral types, the concentrations decreased in the order of Au-Ag-base metal mines ≈ base metal mines > Au-Ag mines > Sn-W-Mo-Fe-Mn mines. For parent rock types, similar concentrations were found in the soils derived from sedimentary rocks and metamorphic rocks followed by heterogeneous rocks with igneous and metamorphic processes. Furthermore, farmland soils contained relatively higher Hg levels than paddy soils. Therefore, it can be concluded that soils in Au, Ag, and base metal mines derived from a hydrothermal vein type of metamorphic rocks and pegmatite deposits contained relatively higher concentrations of mercury in the surface environment.

Hunting for cultivable Micromonospora strains in soils of the Atacama Desert.

PubMed

Carro, Lorena; Razmilic, Valeria; Nouioui, Imen; Richardson, Lee; Pan, Che; Golinska, Patrycja; Asenjo, Juan A; Bull, Alan T; Klenk, Hans-Peter; Goodfellow, Michael

2018-02-26

Innovative procedures were used to selectively isolate small numbers of Micromonospora strains from extreme hyper-arid and high altitude Atacama Desert soils. Micromonosporae were recognised on isolation plates by their ability to produce filamentous microcolonies that were strongly attached to the agar. Most of the isolates formed characteristic orange colonies that lacked aerial hyphae and turned black on spore formation, whereas those from the high altitude soil were dry, blue-green and covered by white aerial hyphae. The isolates were assigned to seven multi- and eleven single-membered groups based on BOX-PCR profiles. Representatives of the groups were assigned to either multi-membered clades that also contained marker strains or formed distinct phyletic lines in the Micromonospora 16S rRNA gene tree; many of the isolates were considered to be putatively novel species of Micromonospora. Most of the isolates from the high altitude soils showed activity against wild type strains of Bacillus subtilis and Pseudomonas fluorescens while those from the rhizosphere of Parastrephia quadrangulares and from the Lomas Bayas hyper-arid soil showed resistance to UV radiation.

Biochar from commercially cultivated seaweed for soil amelioration

PubMed Central

Roberts, David A.; Paul, Nicholas A.; Dworjanyn, Symon A.; Bird, Michael I.; de Nys, Rocky

2015-01-01

Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum – brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma – red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity. PMID:25856799

Biochar from commercially cultivated seaweed for soil amelioration.

PubMed

Roberts, David A; Paul, Nicholas A; Dworjanyn, Symon A; Bird, Michael I; de Nys, Rocky

2015-04-09

Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum--brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma--red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity.

Biochar from commercially cultivated seaweed for soil amelioration

NASA Astrophysics Data System (ADS)

Roberts, David A.; Paul, Nicholas A.; Dworjanyn, Symon A.; Bird, Michael I.; de Nys, Rocky

2015-04-01

Seaweed cultivation is a high growth industry that is primarily targeted at human food and hydrocolloid markets. However, seaweed biomass also offers a feedstock for the production of nutrient-rich biochar for soil amelioration. We provide the first data of biochar yield and characteristics from intensively cultivated seaweeds (Saccharina, Undaria and Sargassum - brown seaweeds, and Gracilaria, Kappaphycus and Eucheuma - red seaweeds). While there is some variability in biochar properties as a function of the origin of seaweed, there are several defining and consistent characteristics of seaweed biochar, in particular a relatively low C content and surface area but high yield, essential trace elements (N, P and K) and exchangeable cations (particularly K). The pH of seaweed biochar ranges from neutral (7) to alkaline (11), allowing for broad-spectrum applications in diverse soil types. We find that seaweed biochar is a unique material for soil amelioration that is consistently different to biochar derived from ligno-cellulosic feedstock. Blending of seaweed and ligno-cellulosic biochar could provide a soil ameliorant that combines a high fixed C content with a mineral-rich substrate to enhance crop productivity.

The soil microbial community composition and soil microbial carbon uptake are more affected by soil type than by different vegetation types (C3 and C4 plants) and seasonal changes

NASA Astrophysics Data System (ADS)

Griselle Mellado Vazquez, Perla; Lange, Markus; Gleixner, Gerd

2016-04-01

This study investigates the influence of different vegetation types (C3 and C4 plants), soil type and seasonal changes on the soil microbial biomass, soil microbial community composition and soil microbial carbon (C) uptake. We collected soil samples in winter (non-growing season) and summer (growing season) in 2012 from an experimental site cropping C3 and C4 plants for 6 years on two different soil types (sandy and clayey). The amount of phospholipid fatty acids (PLFAs) and their compound-specific δ13C values were used to determined microbial biomass and the flow of C from plants to soil microorganisms, respectively. Higher microbial biomass was found in the growing season. The microbial community composition was mainly explained by soil type. Higher amounts of SOC were driving the predominance of G+ bacteria, actinobacteria and cyclic G- bacteria in sandy soils, whereas root biomass was significantly related to the increased proportions of G- bacteria in clayey soils. Plant-derived C in G- bacteria increased significantly in clayey soils in the growing season. This increase was positively and significantly driven by root biomass. Moreover, changes in plant-derived C among microbial groups pointed to specific capabilities of different microbial groups to decompose distinct sources of C. We concluded that soil texture and favorable growth conditions driven by rhizosphere interactions are the most important factors controlling the soil microbial community. Our results demonstrate that a change of C3 plants vs. C4 plants has only a minor effect on the soil microbial community. Thus, such experiments are well suited to investigate soil organic matter dynamics as they allow to trace the C flow from plants into the soil microbial community without changing the community abundance and composition.

Impact of Rotylenchulus reniformis on Cotton Yield as Affected by Soil Texture and Irrigation

PubMed Central

Herring, Stephanie L.; Heitman, Joshua L.

2010-01-01

The effects of soil type, irrigation, and population density of Rotylenchulus reniformis on cotton were evaluated in a two-year microplot experiment. Six soil types, Fuquay sand, Norfolk sandy loam, Portsmouth loamy sand, Muck, Cecil sandy loam, and Cecil sandy clay, were arranged in randomized complete blocks with five replications. Each block had numerous plots previously inoculated with R. reniformis and two or more noninoculated microplots per soil type, one half of which were irrigated in each replicate for a total of 240 plots. Greatest cotton lint yields were achieved in the Muck, Norfolk sandy loam, and Portsmouth loamy sand soils. Cotton yield in the Portsmouth loamy sand did not differ from the Muck soil which averaged the greatest lint yield per plot of all soil types. Cotton yield was negatively related to R. reniformis PI (initial population density) in all soil types except for the Cecil sandy clay which had the highest clay content. Supplemental irrigation increased yields in the higher yielding Muck, Norfolk sandy loam, and Portsmouth loamy sand soils compared to the lower yielding Cecil sandy clay, Cecil sandy loam, and Fuquay sand soils. The Portsmouth sandy loam was among the highest yielding soils, and also supported the greatest R. reniformis population density. Cotton lint yield was affected more by R. reniformis Pi with irrigation in the Portsmouth loamy sand soil with a greater influence of Pi on lint yield in irrigated plots than other soils. A significant first degree PI × irrigation interaction for this soil type confirms this observation. PMID:22736865

Impact of Rotylenchulus reniformis on Cotton Yield as Affected by Soil Texture and Irrigation.

PubMed

Herring, Stephanie L; Koenning, Stephen R; Heitman, Joshua L

2010-12-01

The effects of soil type, irrigation, and population density of Rotylenchulus reniformis on cotton were evaluated in a two-year microplot experiment. Six soil types, Fuquay sand, Norfolk sandy loam, Portsmouth loamy sand, Muck, Cecil sandy loam, and Cecil sandy clay, were arranged in randomized complete blocks with five replications. Each block had numerous plots previously inoculated with R. reniformis and two or more noninoculated microplots per soil type, one half of which were irrigated in each replicate for a total of 240 plots. Greatest cotton lint yields were achieved in the Muck, Norfolk sandy loam, and Portsmouth loamy sand soils. Cotton yield in the Portsmouth loamy sand did not differ from the Muck soil which averaged the greatest lint yield per plot of all soil types. Cotton yield was negatively related to R. reniformis PI (initial population density) in all soil types except for the Cecil sandy clay which had the highest clay content. Supplemental irrigation increased yields in the higher yielding Muck, Norfolk sandy loam, and Portsmouth loamy sand soils compared to the lower yielding Cecil sandy clay, Cecil sandy loam, and Fuquay sand soils. The Portsmouth sandy loam was among the highest yielding soils, and also supported the greatest R. reniformis population density. Cotton lint yield was affected more by R. reniformis Pi with irrigation in the Portsmouth loamy sand soil with a greater influence of Pi on lint yield in irrigated plots than other soils. A significant first degree PI × irrigation interaction for this soil type confirms this observation.

Laser-Induced Breakdown Spectroscopy Coupled with Multivariate Chemometrics for Variety Discrimination of Soil

PubMed Central

Yu, Ke-Qiang; Zhao, Yan-Ru; Liu, Fei; He, Yong

2016-01-01

The aim of this work was to analyze the variety of soil by laser-induced breakdown spectroscopy (LIBS) coupled with chemometrics methods. 6 certified reference materials (CRMs) of soil samples were selected and their LIBS spectra were captured. Characteristic emission lines of main elements were identified based on the LIBS curves and corresponding contents. From the identified emission lines, LIBS spectra in 7 lines with high signal-to-noise ratio (SNR) were chosen for further analysis. Principal component analysis (PCA) was carried out using the LIBS spectra at 7 selected lines and an obvious cluster of 6 soils was observed. Soft independent modeling of class analogy (SIMCA) and least-squares support vector machine (LS-SVM) were introduced to establish discriminant models for classifying the 6 types of soils, and they offered the correct discrimination rates of 90% and 100%, respectively. Receiver operating characteristic (ROC) curve was used to evaluate the performance of models and the results demonstrated that the LS-SVM model was promising. Lastly, 8 types of soils from different places were gathered to conduct the same experiments for verifying the selected 7 emission lines and LS-SVM model. The research revealed that LIBS technology coupled with chemometrics could conduct the variety discrimination of soil. PMID:27279284

Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China

PubMed Central

Tian, Qin; Taniguchi, Takeshi; Shi, Wei-Yu; Li, Guoqing; Yamanaka, Norikazu; Du, Sheng

2017-01-01

Similar land-use types usually have similar soil properties, and, most likely, similar microbial communities. Here, we assessed whether land-use types or soil chemical properties are the primary drivers of soil microbial community composition, and how changes in one part of the ecosystem affect another. We applied Ion Torrent sequencing to the bacterial and fungal communities of five different land-use (vegetation) types in the Loess Plateau of China. We found that the overall trend of soil quality was natural forest > plantation > bare land. Dominant bacterial phyla consisted of Proteobacteria (42.35%), Actinobacteria (15.61%), Acidobacteria (13.32%), Bacteroidetes (8.43%), and Gemmatimonadetes (6.0%). The dominant fungi phyla were Ascomycota (40.39%), Basidiomycota (38.01%), and Zygomycota (16.86%). The results of Canonical Correspondence Analysis (CCA) and Redundancy Analysis (RDA) based on land-use types displayed groups according to the land-use types. Furthermore, the bacterial communities were mainly organized by soil organic carbon (SOC). The fungal communities were mainly related to available phosphorus (P). The results suggested that the changes of land use type generated changes in soil chemical properties, controlling the composition of microbial community in the semiarid Loess Plateau region. The microbial community could be an indicator for soil quality with respect to ecological restoration. PMID:28349918

Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China

NASA Astrophysics Data System (ADS)

Tian, Qin; Taniguchi, Takeshi; Shi, Wei-Yu; Li, Guoqing; Yamanaka, Norikazu; Du, Sheng

2017-03-01

Similar land-use types usually have similar soil properties, and, most likely, similar microbial communities. Here, we assessed whether land-use types or soil chemical properties are the primary drivers of soil microbial community composition, and how changes in one part of the ecosystem affect another. We applied Ion Torrent sequencing to the bacterial and fungal communities of five different land-use (vegetation) types in the Loess Plateau of China. We found that the overall trend of soil quality was natural forest > plantation > bare land. Dominant bacterial phyla consisted of Proteobacteria (42.35%), Actinobacteria (15.61%), Acidobacteria (13.32%), Bacteroidetes (8.43%), and Gemmatimonadetes (6.0%). The dominant fungi phyla were Ascomycota (40.39%), Basidiomycota (38.01%), and Zygomycota (16.86%). The results of Canonical Correspondence Analysis (CCA) and Redundancy Analysis (RDA) based on land-use types displayed groups according to the land-use types. Furthermore, the bacterial communities were mainly organized by soil organic carbon (SOC). The fungal communities were mainly related to available phosphorus (P). The results suggested that the changes of land use type generated changes in soil chemical properties, controlling the composition of microbial community in the semiarid Loess Plateau region. The microbial community could be an indicator for soil quality with respect to ecological restoration.

Production of high-resolution forest-ecosite maps based on model predictions of soil moisture and nutrient regimes over a large forested area.

PubMed

Yang, Qi; Meng, Fan-Rui; Bourque, Charles P-A; Zhao, Zhengyong

2017-09-08

Forest ecosite reflects the local site conditions that are meaningful to forest productivity as well as basic ecological functions. Field assessments of vegetation and soil types are often used to identify forest ecosites. However, the production of high-resolution ecosite maps for large areas from interpolating field data is difficult because of high spatial variation and associated costs and time requirements. Indices of soil moisture and nutrient regimes (i.e., SMR and SNR) introduced in this study reflect the combined effects of biogeochemical and topographic factors on forest growth. The objective of this research is to present a method for creating high-resolution forest ecosite maps based on computer-generated predictions of SMR and SNR for an area in Atlantic Canada covering about 4.3 × 10 6 hectares (ha) of forestland. Field data from 1,507 forest ecosystem classification plots were used to assess the accuracy of the ecosite maps produced. Using model predictions of SMR and SNR alone, ecosite maps were 61 and 59% correct in identifying 10 Acadian- and Maritime-Boreal-region ecosite types, respectively. This method provides an operational framework for the production of high-resolution maps of forest ecosites over large areas without the need for data from expensive, supplementary field surveys.

Assessment of farm soil, biochar, compost and weathered pine mulch to mitigate methane emissions.

PubMed

Syed, Rashad; Saggar, Surinder; Tate, Kevin; Rehm, Bernd H A

2016-11-01

Previous studies have demonstrated the effective utility of volcanic pumice soil to mitigate both high and low levels of methane (CH 4 ) emissions through the activity of both γ-proteobacterial (type I) and α-proteobacterial (type II) aerobic methanotrophs. However, the limited availability of volcanic pumice soil necessitates the assessment of other farm soils and potentially suitable, economical and widely available biofilter materials. The potential biofilter materials, viz. farm soil (isolated from a dairy farm effluent pond bank area), pine biochar, garden waste compost and weathered pine bark mulch, were inoculated with a small amount of volcanic pumice soil. Simultaneously, a similar set-up of potential biofilter materials without inoculum was studied to understand the effect of the inoculum on the ability of these materials to oxidise CH 4 and their effect on methanotroph growth and activity. These materials were incubated at 25 °C with periodic feeding of CH 4 , and flasks were aerated with air (O 2 ) to support methanotroph growth and activity by maintaining aerobic conditions. The efficiency of CH 4 removal was monitored over 6 months. All materials supported the growth and activity of methanotrophs. However, the efficiency of CH 4 removal by all the materials tested fluctuated between no or low removal (0-40 %) and high removal phases (>90 %), indicating biological disturbances rather than physico-chemical changes. Among all the treatments, CH 4 removal was consistently high (>80 %) in the inoculated farm soil and inoculated biochar, and these were more resilient to changes in the methanotroph community. The CH 4 removal from inoculated farm soil and inoculated biochar was further enhanced (up to 99 %) by the addition of a nutrient solution. Our results showed that (i) farm soil and biochar can be used as a biofilter material by inoculating with an active methanotroph community, (ii) an abundant population of α-proteobacterial methanotrophs is essential for effective and stable CH 4 removal and (iii) addition of nutrients enhances the growth and activity of methanotrophs in the biofilter materials. Further studies are underway to assess the feasibility of these materials at small plot and field scales.

Highly Diverse Endophytic and Soil Fusarium oxysporum Populations Associated with Field-Grown Tomato Plants

PubMed Central

Demers, Jill E.; Gugino, Beth K.

2014-01-01

The diversity and genetic differentiation of populations of Fusarium oxysporum associated with tomato fields, both endophytes obtained from tomato plants and isolates obtained from soil surrounding the sampled plants, were investigated. A total of 609 isolates of F. oxysporum were obtained, 295 isolates from a total of 32 asymptomatic tomato plants in two fields and 314 isolates from eight soil cores sampled from the area surrounding the plants. Included in this total were 112 isolates from the stems of all 32 plants, a niche that has not been previously included in F. oxysporum population genetics studies. Isolates were characterized using the DNA sequence of the translation elongation factor 1α gene. A diverse population of 26 sequence types was found, although two sequence types represented nearly two-thirds of the isolates studied. The sequence types were placed in different phylogenetic clades within F. oxysporum, and endophytic isolates were not monophyletic. Multiple sequence types were found in all plants, with an average of 4.2 per plant. The population compositions differed between the two fields but not between soil samples within each field. A certain degree of differentiation was observed between populations associated with different tomato cultivars, suggesting that the host genotype may affect the composition of plant-associated F. oxysporum populations. No clear patterns of genetic differentiation were observed between endophyte populations and soil populations, suggesting a lack of specialization of endophytic isolates. PMID:25304514

Effects of soil type on leaching and runoff transport of rare earth elements and phosphorous in laboratory experiments.

PubMed

Wang, Lingqing; Liang, Tao; Chong, Zhongyi; Zhang, Chaosheng

2011-01-01

Through leaching experiments and simulated rainfall experiments, characteristics of vertical leaching of exogenous rare earth elements (REEs) and phosphorus (P) and their losses with surface runoff during simulated rainfall in different types of soils (terra nera soil, cinnamon soil, red soil, loess soil, and purple soil) were investigated. Results of the leaching experiments showed that vertical transports of REEs and P were relatively low, with transport depths less than 6 cm. The vertical leaching rates of REEs and P in the different soils followed the order of purple soil > terra nera soil > red soil > cinnamon soil > loess soil. Results of the simulated rainfall experiments (83 mm h⁻¹) revealed that more than 92% of REEs and P transported with soil particles in runoff. The loss rates of REEs and P in surface runoff in the different soil types were in the order of loess soil > terra nera soil > cinnamon soil > red soil > purple soil. The total amounts of losses of REEs and P in runoff were significantly correlated.

[Soil infiltration characteristics under main vegetation types in Anji County of Zhejiang Province].

PubMed

Liu, Dao-Ping; Chen, San-Xiong; Zhang, Jin-Chi; Xie, Li; Jiang, Jiang

2007-03-01

The study on the soil infiltration under different main vegetation types in Anji County of Zhejiang Province showed that the characteristics of soil infiltration differed significantly with land use type, and the test eight vegetation types could be classified into four groups, based on soil infiltration capability. The first group, deciduous broadleaved forest, had the strongest soil infiltration capability, and the second group with a stronger soil infiltration capability was composed of grass, pine forest, shrub community and tea bush. Bamboo and evergreen broadleaved forest were classified into the third group with a relatively strong soil infiltration capability, while bare land belonged to the fourth group because of the bad soil structure and poorest soil infiltration capability. The comprehensive parameters of soil infiltration (alpha) and root (beta) were obtained by principal component analysis, and the regression model of alpha and beta could be described as alpha = 0. 1708ebeta -0. 3122. Soil infiltration capability was greatly affected by soil physical and chemical characteristics and root system. Fine roots (< or = 1 mm in diameter) played effective roles on the improvement of soil physical and chemical properties, and the increase of soil infiltration capability was closely related to the amount of the fine roots.

Effect of soil composition, temperature, indigenous microflora, and environmental conditions on the survival of Escherichia coli O157:H7.

PubMed

Vidovic, Sinisa; Block, Hushton C; Korber, Darren R

2007-07-01

The survival of Escherichia coli O157:H7 in replicate soil microcosms was quantified in 2 types of silty clay loam soil (high carbon and low carbon) under either sterile or nonsterile conditions. Microcosms were held at -21, 4, and 22 degrees C under constant soil moisture content. Differences existed (P < 0.05) in survival of E. coli O157:H7 in low- and high-carbon soil at all temperatures, indicating an important role of soil composition on the survival of this pathogen. The highest death rate of E. coli O157:H7 in sterile soil occurred in the low-carbon soil at 4 degrees C, whereas in nonsterile soil the highest death rate was observed in the low-carbon soil at 22 degrees C. These results suggest that the most lethal effects on E. coli O157:H7 in the sterile system occurred via the synergy of nutrient limitation and cold stress, whereas in the nonsterile system lethality was owing to inhibition by indigenous soil microorganisms and starvation. Results obtained from an in situ field survival experiment demonstrated the apparent sensitivity of E. coli O157:H7 cells to dehydration, information that may be used to reduce environmental spread of this pathogen as well as formulate appropriate waste management strategies.

Rainfall simulations to study the types of groundcover on surface runoff and soil erosion in Champagne vineyards in France

NASA Astrophysics Data System (ADS)

Xavier, Morvan; Christophe, Naisse; Issa Oumarou, Malam; Jean-François, Desprats; Anne, Combaud; Olivier, Cerdan

2015-04-01

In the literature, grass cover is often considered to be one of the best methods of limiting runoff in the vineyards; But results can vary, especially when the plot area is <2 m². However, in any study to our knowledge, the way grass cover is structured in the inter-row is taken into account to explain the variability of runoff and soil loss. The objective of this study, conducted in Champagne vineyards in France, was to quantify the influence of the cultivation practices in the inter-rows of vines and determine the influence of the density of the grass cover in the wheel tracks on the surface runoff and soil erosion in experimental plots of 0.25 m2 under simulated rainfall. Three types of ground cover were studied. In the bark-and-vine-prunings plots, the runoff coefficient ranged from 1.3 to 4.0% and soil losses were <1 g/m²/h. In the bare soil plot, the highest runoff coefficient of the study was found (80.0%) and soil losses reached 7.4 g/m²/h. In the grass cover plots, the runoff coefficient and amount of eroded soil were highly variable: the runoff coefficients ranged from 0.4 to 77.0%, and soil losses were between less than 1 and 13.4 g/m²/h. Soil type, soil moisture, slope and agricultural practices did not account for the variability. In fact, the density of grass cover in the wheel tracks explained a portion of this variability. The lack of grass in the centre of the inter-row allowed for a preferential flow and created an erosion line in the wheel tracks where the soil was compacted. This study showed that grass cover in a vineyard was not necessarily sufficient to reduce surface runoff and prevent soil erosion. To be effective, the grass cover must be dense enough in the wheel tracks of agricultural machinery to avoid runoff coefficients close to those achieved with bare soil.

Microbial flora analysis for the degradation of beta-cypermethrin.

PubMed

Qi, Zhang; Wei, Zhang

2017-03-01

In the Xinjiang region of Eurasia, sustained long-term and continuous cropping of cotton over a wide expanse of land is practiced, which requires application of high levels of pyrethroid and other classes of pesticides-resulting in high levels of pesticide residues in the soil. In this study, soil samples were collected from areas of long-term continuous cotton crops with the aim of obtaining microbial resources applicable for remediation of pyrethroid pesticide contamination suitable for the soil type and climate of that area. Soil samples were first used to culture microbial flora capable of degrading beta-cypermethrin using an enrichment culture method. Structural changes and ultimate microbial floral composition during enrichment were analyzed by high-throughput sequencing. Four strains capable of degrading beta-cypermethrin were isolated and preliminarily classified. Finally, comparative rates and speeds of degradation of beta-cypermethrin between relevant microbial flora and single strains were determined. After continuous subculture for 3 weeks, soil sample microbial flora formed a new type of microbial flora by rapid succession, which showed stable growth by utilizing beta-cypermethrin as the sole carbon source (GXzq). This microbial flora mainly consisted of Pseudomonas, Hyphomicrobium, Dokdonella, and Methyloversatilis. Analysis of the microbial flora also permitted separation of four additional strains; i.e., GXZQ4, GXZQ6, GXZQ7, and GXZQ13 that, respectively, belonged to Streptomyces, Enterobacter, Streptomyces, and Pseudomonas. Under culture conditions of 37 °C and 180 rpm, the degradation rate of beta-cypermethrin by GXzq was as high as 89.84% within 96 h, which exceeded that achieved by the single strains GXZQ4, GXZQ6, GXZQ7, and GXZQ13 and their derived microbial flora GXh.

Community Structure of Active Aerobic Methanotrophs in Red Mangrove (Kandelia obovata) Soils Under Different Frequency of Tides.

PubMed

Shiau, Yo-Jin; Cai, Yuanfeng; Lin, Yu-Te; Jia, Zhongjun; Chiu, Chih-Yu

2018-04-01

Methanotrophs are important microbial communities in coastal ecosystems. They reduce CH 4 emission in situ, which is influenced by soil conditions. This study aimed to understand the differences in active aerobic methanotrophic communities in mangrove forest soils experiencing different inundation frequency, i.e., in soils from tidal mangroves, distributed at lower elevations, and from dwarf mangroves, distributed at higher elevations. Labeling of pmoA gene of active methanotrophs using DNA-based stable isotope probing (DNA-SIP) revealed that methanotrophic activity was higher in the dwarf mangrove soils than in the tidal mangrove soils, possibly because of the more aerobic soil conditions. Methanotrophs affiliated with the cluster deep-sea-5 belonging to type Ib methanotrophs were the most dominant methanotrophs in the fresh mangrove soils, whereas type II methanotrophs also appeared in the fresh dwarf mangrove soils. Furthermore, Methylobacter and Methylosarcina were the most important active methanotrophs in the dwarf mangrove soils, whereas Methylomonas and Methylosarcina were more active in the tidal mangrove soils. High-throughput sequencing of the 16S ribosomal RNA (rRNA) gene also confirmed similar differences in methanotrophic communities at the different locations. However, several unclassified methanotrophic bacteria were found by 16S rRNA MiSeq sequencing in both fresh and incubated mangrove soils, implying that methanotrophic communities in mangrove forests may significantly differ from the methanotrophic communities documented in previous studies. Overall, this study showed the feasibility of 13 CH 4 DNA-SIP to study the active methanotrophic communities in mangrove forest soils and revealed differences in the methanotrophic community structure between coastal mangrove forests experiencing different tide frequencies.

An analysis of the dissipation of pharmaceuticals under thirteen different soil conditions.

PubMed

Kodešová, Radka; Kočárek, Martin; Klement, Aleš; Golovko, Oksana; Koba, Olga; Fér, Miroslav; Nikodem, Antonín; Vondráčková, Lenka; Jakšík, Ondřej; Grabic, Roman

2016-02-15

The presence of human and veterinary pharmaceuticals in the environment is recognized as a potential threat. Pharmaceuticals have the potential to contaminate soils and consequently surface and groundwater. Knowledge of contaminant behavior (e.g., sorption onto soil particles and degradation) is essential when assessing contaminant migration in the soil and groundwater environment. We evaluated the dissipation half-lives of 7 pharmaceuticals in 13 soils. The data were evaluated relative to the soil properties and the Freundlich sorption coefficients reported in our previous study. Of the tested pharmaceuticals, carbamazepine had the greatest persistence (which was mostly stable), followed by clarithromycin, trimethoprim, metoprolol, clindamycin, sulfamethoxazole and atenolol. Pharmaceutical persistence in soils was mostly dependent on the soil-type conditions. In general, lower average dissipation half-lives and variability (i.e., trimethoprim, sulfamethoxazole, clindamycin, metoprolol and atenolol) were found in soils of better quality (well-developed structure, high nutrition content etc.), and thus, probably better microbial conditions (i.e., Chernozems), than in lower quality soil (Cambisols). The impact of the compound sorption affinity onto soil particles on their dissipation rate was mostly negligible. Although there was a positive correlation between compound dissipation half-life and Freundlich sorption coefficient for clindamycin (R=0.604, p<0.05) and sulfamethoxazole (R=0.822, p<0.01), the half-life of sulfamethoxazole also decreased under better soil-type conditions. Based on the calculated dissipation and sorption data, carbamazepine would be expected to have the greatest potential to migrate in the soil water environment, followed by sulfamethoxazole, trimethoprim and metoprolol. The transport of clindamycin, clarithromycin and atenolol through the vadose zone seems less probable. Copyright © 2015 Elsevier B.V. All rights reserved.

Soil moisture and evapotranspiration predictions using Skylab data

NASA Technical Reports Server (NTRS)

Myers, V. I. (Principal Investigator); Moore, D. G.; Horton, M. L.; Russell, M. J.

1975-01-01

The author has identified the following significant results. Multispectral reflectance and emittance data from the Skylab workshop were evaluated for prediction of evapotranspiration and soil moisture for an irrigated region of southern Texas. Wavelengths greater than 2.1 microns were required to spectrally distinguish between wet and dry fallow surfaces. Thermal data provided a better estimate of soil moisture than did data from the reflective bands. Thermal data were dependent on soil moisture but not on the type of agricultural land use. The emittance map, when used in conjunction with existing models, did provide an estimate of evapotranspiration rates. Surveys of areas of high soil moisture can be accomplished with space altitude thermal data. Thermal data will provide a reliable input into irrigation scheduling.

Mobility and bio-availability of heavy metals in anthropogenically contaminated alluvial (deluvial) meadow soils (EUTRIC FLUVISOLS)

NASA Astrophysics Data System (ADS)

Dinev, Nikolai; Hristova, Mariana; Tzolova, Venera

2015-04-01

The total content of heavy metals is not sufficient to assess the pollution and the risk for environment as it does not provide information for the type and solubility of heavy metals' compounds in soils. The purpose was to study and determine the mobility of heavy metals in anthropogenically contaminated alluvial (delluvial) meadow soils spread around the non-ferrous plant near the town of Asenovgrad in view of risk assessment for environment pollution. Soil samples from monitoring network (1x1 km) was used. The sequential extraction procedure described by Zein and Brummer (1989) was applied. Results showed that the easily mobilizable cadmium compounds predominate in both contaminated and not contaminated soils. The stable form of copper (associated with silicate minerals, carbonates or amorphous and crystalline oxide compounds) predominates only in non polluted soils and reviles the risk of the environment contamination. Lead spreads and accumulates as highly soluble (mobile) compounds and between 72.3 and 99.6 percent of the total lead is bioavailable in soils. The procedure is very suitable for studying the mobility of technogenic lead and copper in alluvial soils with neutral medium reaction and in particular at the high levels of cadmium contamination. In soils with alkaline reaction - polluted and unpolluted the error of analysis increases for all studied elements.

Influence of Soil Type and Drainage on Growth of Swamp Chestnut Oak (Quercus Michauxii Nutt.) Seedlings

Treesearch

Donald D. Hook

1969-01-01

Swamp chestnut oak (Quercus michauxii Nutt.) seedlings were grown for 2 years in five soil types in drained and undrained pots. First-year height growth was related to soil type and pot drainage, but second-year height growth was related only to soil type. Results suggest that swamp chestnut oak is site-sensitive. But slow growth, a maximum of 2...

Forestry Tire Tractive Performance: New, Worn, and with Chains

Treesearch

C.R. Vechinski; C.R. Johnson; R.L. Raper; T.P. McDonald

1999-01-01

The tractive perfomance of a new tire, a worn tire, and a worn tire with forestry tire chains was measured in four soil types. Two of the soil types simulated forest-floor conditions with one soil type having a sulfate cover of pine straw and the other having a surface cover of sod. The two remaining soil types were bare. The worn tire with and without chains had...

Effect of soil metal contamination on glyphosate mineralization: role of zinc in the mineralization rates of two copper-spiked mineral soils.

PubMed

Kim, Bojeong; Kim, Young Sik; Kim, Bo Min; Hay, Anthony G; McBride, Murray B

2011-03-01

A systematic investigation into lowered degradation rates of glyphosate in metal-contaminated soils was performed by measuring mineralization of [(14)C]glyphosate to (14)CO(2) in two mineral soils that had been spiked with Cu and/or Zn at various loadings. Cumulative (14)CO(2) release was estimated to be approximately 6% or less of the amount of [(14)C]glyphosate originally added in both soils over an 80-d incubation. For all but the highest Cu treatments (400 mg kg(-1)) in the coarse-textured Arkport soil, mineralization began without a lag phase and declined over time. No inhibition of mineralization was observed for Zn up to 400 mg kg(-1) in either soil, suggesting differential sensitivity of glyphosate mineralization to the types of metal and soil. Interestingly, Zn appeared to alleviate high-Cu inhibition of mineralization in the Arkport soil. The protective role of Zn against Cu toxicity was also observed in the pure culture study with Pseudomonas aeruginosa, suggesting that increased mineralization rates in high Cu soil with Zn additions might have been due to alleviation of cellular toxicity by Zn rather than a mineralization specific mechanism. Extensive use of glyphosate combined with its reduced degradation in Cu-contaminated, coarse-textured soils may increase glyphosate persistence in soil and consequently facilitate Cu and glyphosate mobilization in the soil environment. Copyright © 2010 SETAC.

Priming effects on labile and stable soil organic carbon decomposition: Pulse dynamics over two years

PubMed Central

Han, Xiaozeng; Yu, Wantai; Wang, Peng; Cheng, Weixin

2017-01-01

Soil organic carbon (SOC) is a major component in the global carbon cycle. Yet how input of plant litter may influence the loss of SOC through a phenomenon called priming effect remains highly uncertain. Most published results about the priming effect came from short-term investigations for a few weeks or at the most for a few months in duration. The priming effect has not been studied at the annual time scale. In this study for 815 days, we investigated the priming effect of added maize leaves on SOC decomposition of two soil types and two treatments (bare fallow for 23 years, and adjacent old-field, represent stable and relatively labile SOC, respectively) of SOC stabilities within each soil type, using a natural 13C-isotope method. Results showed that the variation of the priming effect through time had three distinctive phases for all soils: (1) a strong negative priming phase during the first period (≈0–90 days); (2) a pulse of positive priming phase in the middle (≈70–160 and 140–350 days for soils from Hailun and Shenyang stations, respectively); and (3) a relatively stabilized phase of priming during the last stage of the incubation (>160 days and >350 days for soils from Hailun and Shenyang stations, respectively). Because of major differences in soil properties, the two soil types produced different cumulative priming effects at the end of the experiment, a positive priming effect of 3–7% for the Mollisol and a negative priming effect of 4–8% for the Alfisol. Although soil types and measurement times modulated most of the variability of the priming effect, relative SOC stabilities also influenced the priming effect for a particular soil type and at a particular dynamic phase. The stable SOC from the bare fallow treatment tended to produce a narrower variability during the first phase of negative priming and also during the second phase of positive priming. Averaged over the entire experiment, the stable SOC (i.e., the bare fallow) was at least as responsive to priming as the relatively labile SOC (i.e., the old-field) if not more responsive. The annual time scale of our experiment allowed us to demonstrate the three distinctive phases of the priming effect. Our results highlight the importance of studying the priming effect by investigating the temporal dynamics over longer time scales. PMID:28934287

Soil cover by natural trees in agroforestry systems

NASA Astrophysics Data System (ADS)

Diaz-Ambrona, C. G. H.; Almoguera Millán, C.; Tarquis Alfonso, A.

2009-04-01

The dehesa is common agroforestry system in the Iberian Peninsula. These open oak parklands with silvo-pastoral use cover about two million hectares. Traditionally annual pastures have been grazed by cows, sheep and also goats while acorns feed Iberian pig diet. Evergreen oak (Quercus ilex L.) has other uses as fuelwood collection and folder after tree pruning. The hypothesis of this work is that tree density and canopy depend on soil types. We using the spanish GIS called SIGPAC to download the images of dehesa in areas with different soil types. True colour images were restoring to a binary code, previously canopy colour range was selected. Soil cover by tree canopy was calculated and number of trees. Processing result was comparable to real data. With these data we have applied a dynamic simulation model Dehesa to determine evergreen oak acorn and annual pasture production. The model Dehesa is divided into five submodels: Climate, Soil, Evergreen oak, Pasture and Grazing. The first three require the inputs: (i) daily weather data (maximum and minimum temperatures, precipitation and solar radiation); (ii) the soil input parameters for three horizons (thickness, field capacity, permanent wilting point, and bulk density); and (iii) the tree characterization of the dehesa (tree density, canopy diameter and height, and diameter of the trunk). The influence of tree on pasture potential production is inversely proportional to the canopy cover. Acorn production increase with tree canopy cover until stabilizing itself, and will decrease if density becomes too high (more than 80% soil tree cover) at that point there is competition between the trees. Main driving force for dehesa productivity is soil type for pasture, and tree cover for acorn production. Highest pasture productivity was obtained on soil Dystric Planosol (Alfisol), Dystric Cambisol and Chromo-calcic-luvisol, these soils only cover 22.4% of southwest of the Iberian peninssula. Lowest productivity was obtained on Dystric Lithosol.

Impervious Surfaces Alter Soil Bacterial Communities in Urban Areas: A Case Study in Beijing, China

PubMed Central

Hu, Yinhong; Dou, Xiaolin; Li, Juanyong; Li, Feng

2018-01-01

The rapid expansion of urbanization has caused land cover change, especially the increasing area of impervious surfaces. Such alterations have significant effects on the soil ecosystem by impeding the exchange of gasses, water, and materials between soil and the atmosphere. It is unclear whether impervious surfaces have any effects on soil bacterial diversity and community composition. In the present study, we conducted an investigation of bacterial communities across five typical land cover types, including impervious surfaces (concrete), permeable pavement (bricks with round holes), shrub coverage (Buxus megistophylla Levl.), lawns (Festuca elata Keng ex E. Alexeev), and roadside trees (Sophora japonica Linn.) in Beijing, to explore the response of bacteria to impervious surfaces. The soil bacterial communities were addressed by high-throughput sequencing of the bacterial 16S rRNA gene. We found that Proteobacteria, Actinobacteria, Acidobacteria, Bacteroidetes, Chloroflexi, and Firmicutes were the predominant phyla in urban soils. Soil from impervious surfaces presented a lower bacterial diversity, and differed greatly from other types of land cover. Soil bacterial diversity was predominantly affected by Zn, dissolved organic carbon (DOC), and soil moisture content (SMC). The composition of the bacterial community was similar under shrub coverage, roadside trees, and lawns, but different from beneath impervious surfaces and permeable pavement. Variance partitioning analysis showed that edaphic properties contributed to 12% of the bacterial community variation, heavy metal pollution explained 3.6% of the variation, and interaction between the two explained 33% of the variance. Together, our data indicate that impervious surfaces induced changes in bacterial community composition and decrease of bacterial diversity. Interactions between edaphic properties and heavy metals were here found to change the composition of the bacterial community and diversity across areas with different types of land cover, and soil properties play a more important role than heavy metals. PMID:29545776

Woodland carbon code: building an evidence base for the "4 per mil" initiative in land converted to forestry.

NASA Astrophysics Data System (ADS)

Hannam, Jacqueline; Vanguelova, Elena; West, Vicky

2017-04-01

The Woodland Carbon Code is a voluntary standard for woodland creation projects in the UK. Carbon sequestration resulting from certified projects will contribute directly to the UK's national targets for reducing emissions of greenhouse gases (GHG). Whilst this is concerned primarily with above ground capture there is little empirical evidence of the longer term carbon sequestration potential of soils under this land use change in the UK. We present preliminary results from a resurvey of 20 sites originally sampled as part of the soil survey of England and Wales. It includes soil carbon stocks assessed within the soil profile (up to 1m depth) where sites have been converted to forestry in the last 40 years. The small number of sites (n=20) and high variability in soil type, forest type and original land use prevented detailed analysis between these different factors, but overall there was an increase in carbon concentration in the whole profile, driven primarily by an increase the surface organic layers. For all sites combined there was no significant difference in the C stocks between the two survey periods. The increase in carbon stock in the surface organic horizons tended to be offset by a decrease in the mineral subsoils (specifically in Brown Earth soils) primarily as a result of bulk density changes. There are presently insufficient measured data from a range of UK climate, land-use and soil type conditions to quantify with confidence soil C changes during afforestation. This is partly because of the difficulties of detecting relatively slow changes in spatially heterogeneous soils and also obtaining good examples of sites that have undergone documented land use change. Reviewing results from all ongoing afforestation projects in the UK will provide better quantification of the C sequestration potential of forest soils to be accounted for in the Woodland Carbon Code's overall GHG mitigation potential.

Major element chemistry of glasses in Apollo 14 soil 14156.

NASA Technical Reports Server (NTRS)

Reid, A. M.; Ridley, W. I.; Harmon, R. S.; Jakes, P.

1973-01-01

Glasses in a soil sample (14156) from the middle layer of the trench at the Fra Mauro landing site show a wide range of compositions clustered around certain preferred compositions. Ninety per cent of the glasses are of two major types - Fra Mauro basalt (63%) with high K and 17 wt % Al2O3 and Highland basalt or anorthositic gabbro (27%) with low K and 25 to 26 wt % Al2O3. The glass population is almost identical with that of the comprehensive soil 14259.

Effects of soil spatial variability at the hillslope and catchment scales on characteristics of rainfall-induced landslides

NASA Astrophysics Data System (ADS)

Fan, Linfeng; Lehmann, Peter; Or, Dani

2016-03-01

Spatial variations in soil properties affect key hydrological processes, yet their role in soil mechanical response to hydro-mechanical loading is rarely considered. This study aims to fill this gap by systematically quantifying effects of spatial variations in soil type and initial water content on rapid rainfall-induced shallow landslide predictions at the hillslope- and catchment-scales. We employed a physically-based landslide triggering model that considers mechanical interactions among soil columns governed by strength thresholds. At the hillslope scale, we found that the emergence of weak regions induced by spatial variations of soil type and initial water content resulted in early triggering of landslides with smaller volumes of released mass relative to a homogeneous slope. At the catchment scale, initial water content was linked to a topographic wetness index, whereas soil type varied deterministically with soil depth considering spatially correlated stochastic components. Results indicate that a strong spatial organization of initial water content delays landslide triggering, whereas spatially linked soil type with soil depth promoted landslide initiation. Increasing the standard deviation and correlation length of the stochastic component of soil type increases landslide volume and hastens onset of landslides. The study illustrates that for similar external boundary conditions and mean soil properties, landslide characteristics vary significantly with soil variability, hence it must be considered for improved landslide model predictions.

Large-scale habitat associations of four desert anurans in Big Bend National Park, Texas

USGS Publications Warehouse

Dayton, Gage H.; Jung, R.E.; Droege, S.

2004-01-01

We used night driving to examine large scale habitat associations of four common desert anurans in Big Bend National Park, Texas. We examined association of soil types and vegetation communities with abundance of Couch's Spadefoots (Scaphiopus couchii), Red-spotted Toads (Bufo punctatus), Texas Toads (Bufo speciosus), and Western Green Toads (Bufo debilis). All four species were disproportionately associated with frequently inundated soils that are relatively high in clay content. Bufo punctatus was associated with rocky soil types more frequently than the other three species. Association between all four species and vegetation types was disproportionate in relation to availability. Bufo debilis and Bufo punctatus were associated with creosote and mixed scrub vegetation. Bufo speciosus and Scaphiopus couchii were associated with mesquite scrub vegetation. Bufo debilis, Scaphiopus couchii, and B. speciosus were more tightly associated with specific habitat types, whereas B. punctatus exhibited a broader distribution across the habitat categories. Examining associations between large-scale habitat categories and species abundance is an important first step in understanding factors that influence species distributions and presence-absence across the landscape.

The impact of cotton growing practices on soil microbiology and its relation to plant and soil health

NASA Astrophysics Data System (ADS)

Pereg, Lily

2013-04-01

Crop production and agricultural practices heavily impact the soil microbial communities, which differ among varying types of soils and environmental conditions. Soil-borne microbial communities in cotton production systems, as in every other cropping system, consist of microbial populations that may either be pathogenic, beneficial or neutral with respect to the cotton crop. Crop production practices have major roles in determining the composition of microbial communities and function of microbial populations in soils. The structure and function of any given microbial community is determined by various factors, including those that are influenced by farming and those not controlled by farming activities. Examples of the latter are environmental conditions such as soil type, temperature, daylight length and UV radiation, air humidity, atmospheric pressure and some abiotic features of the soil. On the other hand, crop production practices may determine other abiotic soil properties, such as water content, density, oxygen levels, mineral and elemental nutrient levels and the load of other crop-related soil amendments. Moreover, crop production highly influences the biotic properties of the soil and has a major role in determining the fate of soil-borne microbial communities associated with the crop plant. Various microbial strains react differently to the presence of certain plants and plant exudates. Therefore, the type of plant and crop rotations are important factors determining microbial communities. In addition, practice management, e.g. soil cultivation versus crop stubble retention, have a major effect on the soil conditions and, thus, on microbial community structure and function. All of the above-mentioned factors can lead to preferential selection of certain microbial population over others. It may affect not only the composition of microbial communities (diversity and abundance of microbial members) but also the function of the community (the ability of different microbes to perform certain activities). Therefore, agricultural practices may determine the ability of beneficial microbes to realise their plant growth promoting potential or the pathogenic expression of others. This presentation will review the current knowledge about the impact of cotton growing practices on microbial communities and soil health in different environments as well as endeavour to identify gaps worthwhile exploring in future research for promoting plant growth in healthy soils.

Evaluation of MODIS NDVI and NDWI for vegetation drought monitoring using Oklahoma Mesonet soil moisture data

USGS Publications Warehouse

Gu, Yingxin; Hunt, E.; Wardlow, B.; Basara, J.B.; Brown, Jesslyn F.; Verdin, J.P.

2008-01-01

The evaluation of the relationship between satellite-derived vegetation indices (normalized difference vegetation index and normalized difference water index) and soil moisture improves our understanding of how these indices respond to soil moisture fluctuations. Soil moisture deficits are ultimately tied to drought stress on plants. The diverse terrain and climate of Oklahoma, the extensive soil moisture network of the Oklahoma Mesonet, and satellite-derived indices from the Moderate Resolution Imaging Spectroradiometer (MODIS) provided an opportunity to study correlations between soil moisture and vegetation indices over the 2002-2006 growing seasons. Results showed that the correlation between both indices and the fractional water index (FWI) was highly dependent on land cover heterogeneity and soil type. Sites surrounded by relatively homogeneous vegetation cover with silt loam soils had the highest correlation between the FWI and both vegetation-related indices (r???0.73), while sites with heterogeneous vegetation cover and loam soils had the lowest correlation (r???0.22). Copyright 2008 by the American Geophysical Union.

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally

PubMed Central

Ramirez, Kelly S.; Leff, Jonathan W.; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W.; Kelly, Eugene F.; Oldfield, Emily E.; Shaw, E. Ashley; Steenbock, Christopher; Bradford, Mark A.; Wall, Diana H.; Fierer, Noah

2014-01-01

Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. PMID:25274366

Leaching potential of chlorpyrifos in an Andisol and Entisol: adsorption-desorption and degradation studies

NASA Astrophysics Data System (ADS)

Mosquera-Vivas, Carmen; Walther Hansen, Eddy; Garcia-Santos, Glenda; Obregón-Neira, Nelson; Celis-Ossa, Raul Ernesto; González-Murillo, Carlos Alberto; Juraske, Ronnie; Hellweg, Stefanie; Guerrero-Dallos, Jairo Arturo

2017-04-01

Ecological status of tropical soils like high OC content and microbial activity plays a key role to reduce the leaching of insecticide chlorpyrifos through the soil profile and therefore into groundwater. We found that chlorpyrifos has "transitional" leaching potential (GUS values varied between 1.8 and 2.5) throughout the soil depth, which differs from the "nonleacher" classification for temperate soils as based on surface level t1/2 and Koc values from international databases. These findings provide strong evidence of the importance of estimating the transport parameters and insecticide concentrations in different soil layers, especially when the amount and type of OC content vary throughout the soil profile. We got to such conclusions after studying the soil profile structural composition of soil organic matter and the adsorption/desorption characteristics of the insecticide in two different soil profiles (Andisol and Entisol) under agriculture production using Fourier transform infrared spectroscopy, nuclear magnetic resonance, and batch analysis methods.

WEPP and ANN models for simulating soil loss and runoff in a semi-arid Mediterranean region.

PubMed

Albaradeyia, Issa; Hani, Azzedine; Shahrour, Isam

2011-09-01

This paper presents the use of both the Water Erosion Prediction Project (WEPP) and the artificial neural network (ANN) for the prediction of runoff and soil loss in the central highland mountainous of the Palestinian territories. Analyses show that the soil erosion is highly dependent on both the rainfall depth and the rainfall event duration rather than on the rainfall intensity as mostly mentioned in the literature. The results obtained from the WEPP model for the soil loss and runoff disagree with the field data. The WEPP underestimates both the runoff and soil loss. Analyses conducted with the ANN agree well with the observation. In addition, the global network models developed using the data of all the land use type show a relatively unbiased estimation for both runoff and soil loss. The study showed that the ANN model could be used as a management tool for predicting runoff and soil loss.

Effect of scrub oak and associated ground cover on soil moisture

Treesearch

Arthur R. Eschner

1960-01-01

Planting experiments have been conducted for the past 10 years in the scrub oak type at the Delaware-Lehigh Experimental Forest in eastern Pennsylvania. The object of these experiments is to find a practical method of establishing a high forest of greater value than the area's present cover. In the course of these studies it was suggested that soil moisture might...

Spatially distributed modeling of soil organic carbon across China with improved accuracy

NASA Astrophysics Data System (ADS)

Li, Qi-quan; Zhang, Hao; Jiang, Xin-ye; Luo, Youlin; Wang, Chang-quan; Yue, Tian-xiang; Li, Bing; Gao, Xue-song

2017-06-01

There is a need for more detailed spatial information on soil organic carbon (SOC) for the accurate estimation of SOC stock and earth system models. As it is effective to use environmental factors as auxiliary variables to improve the prediction accuracy of spatially distributed modeling, a combined method (HASM_EF) was developed to predict the spatial pattern of SOC across China using high accuracy surface modeling (HASM), artificial neural network (ANN), and principal component analysis (PCA) to introduce land uses, soil types, climatic factors, topographic attributes, and vegetation cover as predictors. The performance of HASM_EF was compared with ordinary kriging (OK), OK, and HASM combined, respectively, with land uses and soil types (OK_LS and HASM_LS), and regression kriging combined with land uses and soil types (RK_LS). Results showed that HASM_EF obtained the lowest prediction errors and the ratio of performance to deviation (RPD) presented the relative improvements of 89.91%, 63.77%, 55.86%, and 42.14%, respectively, compared to the other four methods. Furthermore, HASM_EF generated more details and more realistic spatial information on SOC. The improved performance of HASM_EF can be attributed to the introduction of more environmental factors, to explicit consideration of the multicollinearity of selected factors and the spatial nonstationarity and nonlinearity of relationships between SOC and selected factors, and to the performance of HASM and ANN. This method may play a useful tool in providing more precise spatial information on soil parameters for global modeling across large areas.

Soil charcoal from the plains to tundra in the Colorado Front Range

NASA Astrophysics Data System (ADS)

Sanford, R. L.; Licata, C.

2010-12-01

Throughout the forests of the central Rockies, soil charcoal from Holocene wildfires has been produced in response to wildland natural fire regimes. The extent and spatial distribution of soil charcoal production is poorly documented in this region, especially with regard to forests and shrublands at different elevations. Soil charcoal is a super-passive C pool derived from woody biomass that can be sequestered for millennia in forest soils. Recent research indicates that soil charcoal may promote enhanced soil fertility. Additionally, soil charcoal is an often overlooked component of soil C mass and flux. We hypothesize that differences in forest and shrubland fire regimes over the millennia have resulted in different soil charcoal amounts. Geospatial data were used to locate random sample plots in foothills shrublands (Cercocarpus montanus), and four forest types; ponderosa pine (Pinus ponderosa), Douglas-fir (Pseudotsuga menziesii), lodgepole pine (Pinus contorta) and spruce-fir (Picea engelmannii - Abies lasiocarpa). Sample plots were stratified to occur with the mid 200 m elevation band of each vegetation type with east aspect, and 10-30% slope. Soils were sampled widely at 0-10 cm depth and analyzed for total soil C and soil charcoal C via chemical digestion and dry combustion techniques. Overall, soil charcoal is four times more abundant in spruce-fir forests than in foothills shrublands (1.9 +/- 0.92 Mg C/ha versus 0.54 +/- 0.44 Mg C/ha). Soil charcoal is also abundant in lodgepole pine and ponderosa pine soils (1.4 +/- 1.02 Mg C/ha and 1.4 +/- 0.54 Mg C/ha respectively) but is less plentiful in Douglas-fir soils (1.0 +/- 0.67). Spruce-fir forests have the most above ground biomass, slower decomposition rates and a less frequent mean fire return interval than the other four forests, hence it makes sense that high per-fire rates of charcoal production would occur in the spruce-fir zone, given large amounts of surface fuels at the time of fire. In contrast, low amounts of coarse woody debris in ponderosa, lodgepole, and shrub communities would cause less charcoal to form, despite higher fire frequencies. The Douglas-fir soil charcoal seems anomalously low, but it may reflect a combination of low forest floor woody debris and low fire frequency. Foothills shrublands have the least biomass, comparatively rapid decomposition rates and a more frequent mean fire return interval. We propose that high biomass and slow turnover rates in the spruce-fir forests creates conditions for relatively higher net soil charcoal accumulation.

Modeling diffusion and reaction in soils: 9. The Buckingham-Burdine-Campbell equation for gas diffusivity in undisturbed soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moldrup, P.; Olesen, T.; Yamaguchi, T.

1999-08-01

Accurate description of gas diffusivity (ratio of gas diffusion coefficients in soil and free air, D{sub s}/D{sub 0}) in undisturbed soils is a prerequisite for predicting in situ transport and fate of volatile organic chemicals and greenhouse gases. Reference point gas diffusivities (R{sub p}) in completely dry soil were estimated for 20 undisturbed soils by assuming a power function relation between gas diffusivity and air-filled porosity ({epsilon}). Among the classical gas diffusivity models, the Buckingham (1904) expression, equal to the soil total porosity squared, best described R{sub p}. Inasmuch, as their previous works implied a soil-type dependency of D{sub s}/D{submore » 0}({epsilon}) in undisturbed soils, the Buckingham R{sub p} expression was inserted in two soil-type-dependent D{sub s}/D{sub 0}({epsilon}) models. One D{sub s}/D{sub 0}({epsilon}) model is a function of pore-size distribution (the Campbell water retention parameter used in a modified Burdine capillary tube model), and the other is a calibrated, empirical function of soil texture (silt + sand fraction). Both the Buckingham-Burdine-Campbell (BBC) and the Buckingham/soil texture-based D{sub s}/D{sub 0}({epsilon}) models described well the observed soil type effects on gas diffusivity and gave improved predictions compared with soil type independent models when tested against an independent data set for six undisturbed surface soils. This study emphasizes that simple but soil-type-dependent power function D{sub s}/D{sub 0}({epsilon}) models can adequately describe and predict gas diffusivity in undisturbed soil. The authors recommend the new BBC model as basis for modeling gas transport and reactions in undisturbed soil systems.« less

Converging patterns of uptake and hydraulic redistribution of soil water in contrasting woody vegetation types.

Treesearch

F.C. Meinzer; J.R. Brooks; S. Bucci; G. Goldstein; F.G. Scholz; J.M. Arren

2004-01-01

We used concurrent measurements of soil water content and soil water potential (Ψsoil) to assess the effects of Ψsoil on uptake and hydraulic redistribution (HR) of soil water by roots during seasonal drought cycles at six sites characterized by differences in the types and amounts of woody vegetations and...

Soil Fertility Evaluation and Land Management of Dryland Farming at Tegallalang Sub-District, Gianyar Regency, Bali, Indonesia

NASA Astrophysics Data System (ADS)

Sardiana, I. K.; Susila, D.; Supadma, A. A.; Saifulloh, M.

2017-12-01

The landuse of Tegallalang Subdistrict is dominated by dryland farming. The practice of cultivation on agricultural dryland that ignores the carrying capacity of the environment can lead to land degradation that makes the land vulnerable to the deterioration of soil fertility. Soil fertility evaluation and land management of dryland farming in Tegallalang Sub-district, Gianyar Regency were aimed at (1) identifying the soil fertility and it’s respective limiting factors, (2) mapping the soil fertility using Geographic Information Systems (GIS) and (3) developing land management for dryland farming in Tegallalang Sub-district. This research implementing explora-tory method which followed by laboratory analysis. Soil samples were taken on each homogene-ous land units which developed by overlay of slope, soil type, and land use maps. The following soil fertility were measured, such as CEC, base saturation, P2O5, K- Total and C-Organic. The values of soil fertility were mapping using QGIS 2.18.7 and refer to land management evaluation. The results showed that the soil fertility in the research area considered high, and low level. The High soil fertility presents on land units at the flat to undulating slope with different land management systems (fertilizer, without fertilizer, soil tillage and without soil tillage). The low soil fertility includes land units that present on steep slope, and without land managements. The limiting factors of soil fertility were texture, C-Organic, CEC, P2O5, and K- total. It was recommended to applying organic fertilizer, Phonska, and dolomite on the farming area.

A Refined Crop Drought Monitoring Method Based on the Chinese GF-1 Wide Field View Data

PubMed Central

Chang, Sheng; Wu, Bingfang; Yan, Nana; Zhu, Jianjun; Wen, Qi; Xu, Feng

2018-01-01

In this study, modified perpendicular drought index (MPDI) models based on the red-near infrared spectral space are established for the first time through the analysis of the spectral characteristics of GF-1 wide field view (WFV) data, with a high spatial resolution of 16 m and the highest frequency as high as once every 4 days. GF-1 data was from the Chinese-made, new-generation high-resolution GF-1 remote sensing satellites. Soil-type spatial data are introduced for simulating soil lines in different soil types for reducing errors of using same soil line. Multiple vegetation indices are employed to analyze the response to the MPDI models. Relative soil moisture content (RSMC) and precipitation data acquired at selected stations are used to optimize the drought models, and the best one is the Two-band enhanced vegetation index (EVI2)-based MPDI model. The crop area that was statistically significantly affected by drought from a local governmental department, and used for validation. High correlations and small differences in drought-affected crop area was detected between the field observation data from the local governmental department and the EVI2-based MPDI results. The percentage of bias is between −21.8% and 14.7% in five sub-areas, with an accuracy above 95% when evaluating the performance via the data for the whole study region. Generally the proposed EVI2-based MPDI for GF-1 WFV data has great potential for reliably monitoring crop drought at a relatively high frequency and spatial scale. Currently there is almost no drought model based on GF-1 data, a full exploitation of the advantages of GF-1 satellite data and further improvement of the capacity to observe ground surface objects can provide high temporal and spatial resolution data source for refined monitoring of crop droughts. PMID:29690639

A Refined Crop Drought Monitoring Method Based on the Chinese GF-1 Wide Field View Data.

PubMed

Chang, Sheng; Wu, Bingfang; Yan, Nana; Zhu, Jianjun; Wen, Qi; Xu, Feng

2018-04-23

In this study, modified perpendicular drought index (MPDI) models based on the red-near infrared spectral space are established for the first time through the analysis of the spectral characteristics of GF-1 wide field view (WFV) data, with a high spatial resolution of 16 m and the highest frequency as high as once every 4 days. GF-1 data was from the Chinese-made, new-generation high-resolution GF-1 remote sensing satellites. Soil-type spatial data are introduced for simulating soil lines in different soil types for reducing errors of using same soil line. Multiple vegetation indices are employed to analyze the response to the MPDI models. Relative soil moisture content (RSMC) and precipitation data acquired at selected stations are used to optimize the drought models, and the best one is the Two-band enhanced vegetation index (EVI2)-based MPDI model. The crop area that was statistically significantly affected by drought from a local governmental department, and used for validation. High correlations and small differences in drought-affected crop area was detected between the field observation data from the local governmental department and the EVI2-based MPDI results. The percentage of bias is between −21.8% and 14.7% in five sub-areas, with an accuracy above 95% when evaluating the performance via the data for the whole study region. Generally the proposed EVI2-based MPDI for GF-1 WFV data has great potential for reliably monitoring crop drought at a relatively high frequency and spatial scale. Currently there is almost no drought model based on GF-1 data, a full exploitation of the advantages of GF-1 satellite data and further improvement of the capacity to observe ground surface objects can provide high temporal and spatial resolution data source for refined monitoring of crop droughts.

Photoautotrophic organisms control microbial abundance and diversity in biological soil crusts

NASA Astrophysics Data System (ADS)

Tamm, Alexandra; Maier, Stefanie; Wu, Dianming; Caesar, Jennifer; Hoffman, Timm; Grube, Martin; Weber, Bettina

2017-04-01

Vascular vegetation is typically quite sparse or even absent in dryland ecosystems all over the world, but the ground surface is not bare and largely covered by biological soil crusts (referred to as biocrusts hereafter). These biocrust communities generally comprise poikilohydric organisms. They are usually dominated by photoautotrophic cyanobacteria, lichens and mosses, growing together with heterotrophic fungi, bacteria and archaea in varying composition. Cyanobacteria-, lichen- and moss-dominated biocrusts are known to stabilize the soil and to influence the water budgets and plant establishment. The autotrophic organisms take up atmospheric CO2, and (cyano-)bacteria fix atmospheric nitrogen. The intention of the present project was to study the relevance of the dominating photoautotrophic organisms for biocrust microbial composition and physiology. High-throughput sequencing revealed that soil microbiota of biocrusts largely differ from the bacterial community in bare soil. We observed that bacterial and fungal abundance (16S and 18S rRNA gene copy numbers) as well as alpha diversity was lowest in bare soil, and increasing from cyanobacteria-, and chlorolichen- to moss-dominated biocrusts. CO2 gas exchange measurements revealed large respiration rates of the soil in moss-dominated biocrusts, which was not observed for cyanobacteria- and chlorolichen-dominated biocrusts. Thus, soil respiration of moss-dominated biocrusts is mainly due to the activity of the microbial communities, whereas the microorganisms in the other biocrust types are either dormant or feature functionally different microbial communities. Our results indicate that biocrust type determines the pattern of microbial communities in the underlying soil layer.

Mobility and persistence of the herbicide fomesafen in soils cultivated with bean plants using SLE/LTP and HPLC/DAD.

PubMed

Costa, Anna I G; Queiroz, Maria Eliana L R; Neves, Antônio A; de Assis, Roberta C; dos Soares, Carlos E S; da Silva, Antônio A; D'Antonino, Leonardo; de Oliveira, André F; Bellato, Carlos R

2015-03-01

A method has been optimized and validated for the determination of fomesafen in soils using solid-liquid extraction with low-temperature partitioning (SLE/LTP) and analysis by liquid chromatography with a high-efficiency diode array detector (HPLC/DAD). The method was used to evaluate the persistence and mobility of this herbicide in different soils cultivated with bean plants. Recovery values were ≥98.9 %, with variations in the repeatability coefficients of ≤15 %, and a detection limit of 7.3 μg kg(-1). Half-life values of fomesafen were between 60 and 71 days in soil cultivated using a no-till system and 99 and 114 days in soil cultivated using a conventional tillage system. The mobility of fomesafen was moderate and mainly influenced by the organic matter content, pH, and soil type. In Red-Yellow Argisol, which has a higher content of organic matter, the leaching of fomesafen was less pronounced. In Red-Yellow Latosol, which has smaller amounts of organic matter and high pH, the leaching of fomesafen was more pronounced.

Modelling soil salinity in Oued El Abid watershed, Morocco

NASA Astrophysics Data System (ADS)

Mouatassime Sabri, El; Boukdir, Ahmed; Karaoui, Ismail; Arioua, Abdelkrim; Messlouhi, Rachid; El Amrani Idrissi, Abdelkhalek

2018-05-01

Soil salinisation is a phenomenon considered to be a real threat to natural resources in semi-arid climates. The phenomenon is controlled by soil (texture, depth, slope etc.), anthropogenic factors (drainage system, irrigation, crops types, etc.), and climate factors. This study was conducted in the watershed of Oued El Abid in the region of Beni Mellal-Khenifra, aimed at localising saline soil using remote sensing and a regression model. The spectral indices were extracted from Landsat imagery (30 m resolution). A linear correlation of electrical conductivity, which was calculated based on soil samples (ECs), and the values extracted based on spectral bands showed a high accuracy with an R2 (Root square) of 0.80. This study proposes a new spectral salinity index using Landsat bands B1 and B4. This hydro-chemical and statistical study, based on a yearlong survey, showed a moderate amount of salinity, which threatens dam water quality. The results present an improved ability to use remote sensing and regression model integration to detect soil salinity with high accuracy and low cost, and permit intervention at an early stage of salinisation.

Appalachian piedmont regolith: Relations of saprolite and residual soils to rock-type

USGS Publications Warehouse

Pavich, M.J.

1996-01-01

Saprolite is a major product of rock weathering on the Appalachian Piedmont from New Jersey to Alabama. On the Piedmont, it is the primary substrate from which residual soils are developed. Properties of saprolite and residual soils are highly related to their parent rocks. Studies of cores and outcrops illustrate that rock structure and mineralogy control upland regolith zonation. Saprolite develops by in situ chemical alteration of a wide variety of mafic to highly silicic rocks. Thickness of upland saprolite varies from a few meters on mafic rocks to tens of meters on silicic rocks. Saprolite thickness decreases with increasing slope and saprolite is generally thin or absent in valley bottoms. Massive residual subsoils and soils develop by physical and chemical processes that alter the upper few meters of saprolite. The fabric, texture and mineralogy of residual soils are distinctly different from underlying saprolite. The boundary between soil and saprolite is often gradual, and often a zone of low permeability. Geologic maps are useful guides to Piedmont regolith thickness and zonation. In regional design studies, geologic maps and regolith characteristics can be useful in environmental decision-making.

Experimental monitoring and numerical study of pesticide (carbofuran) transfer in an agricultural soil at a field site

NASA Astrophysics Data System (ADS)

Hmimou, Abderrahim; Maslouhi, Abdellatif; Tamoh, Karim; Candela, Lucila

2014-09-01

We studied the transport of a pesticide at field scale, namely carbofuran molecule, which is known for its high mobility, especially in sandy soils with high hydraulic conductivity and low organic matter. To add to our knowledge of the future of this high-mobility molecule in this type of soils, we developed a mechanistic numerical model allowing the simulation of hydric and solute transfers (bromide and carbofuran) in the soil. We carried out this study in an agricultural plot in the region of Mnasra in Morocco. Confrontation of the measured and simulated values allowed the calibration of the parameters of hydric transfer and carbofuran. The developed model accurately reproduces the measured values. Despite a weak irrigation and precipitation regime, carbofuran was practically leached beyond the root zone. Prospective simulations show that under a more important irrigation regime, carbofuran reaches a 100-cm depth, whereas it does not exceed 60 cm under a deficit regime.

Variations of Soil Lead in Different Land Uses Along the Urbanization Gradient in the Beijing Metropolitan Area

PubMed Central

Mao, Qizheng; Huang, Ganlin; Ma, Keming; Sun, Zexiang

2014-01-01

Understanding the spatial pattern of soil lead (Pb) levels is essential to protecting human health. Most previous studies have examined soil Pb distributions by either urbanization gradient or land-use type. Few studies, however, have examined both factors together. It remains unclear whether the impacts of land use on soil Pb levels are consistent along the urbanization gradient. To fill this gap, we investigated variations in soil Pb level under different land-use types along the urbanization gradient in Beijing, China. We classified the degree of urbanization as the urban core, transitional zone, or suburban area and the land-use type as industrial area, roadside, residential area, institutional area, road greenbelt, park, or forest. Our results showed that the range of soil Pb levels in Beijing is <1 mg/kg–292 mg/kg, with a mean of 22 mg/kg. Along the urbanization gradient, the mean soil Pb level increased from the suburban area to the urban core. Land-use types have an impact on soil Pb levels, however, when the degree of urbanization is considered, the impact from land use on soil Pb level was only significant in the transitional zone. Parks and road greenbelts were found to have lower soil Pb, primarily due to soil restoration. Roadside and residential areas were found to have higher soil Pb because of traffic emissions, leaded paint, and previous industrial contamination. In the urban core and suburban area, the soil Pb level showed no significant differences among various land-use types. Given the results of soil Pb in various land-use types, we suggest that future studies consider the urbanization gradient in which different land-use samples are located. PMID:24646863

Variations of soil lead in different land uses along the urbanization gradient in the Beijing metropolitan area.

PubMed

Mao, Qizheng; Huang, Ganlin; Ma, Keming; Sun, Zexiang

2014-03-18

Understanding the spatial pattern of soil lead (Pb) levels is essential to protecting human health. Most previous studies have examined soil Pb distributions by either urbanization gradient or land-use type. Few studies, however, have examined both factors together. It remains unclear whether the impacts of land use on soil Pb levels are consistent along the urbanization gradient. To fill this gap, we investigated variations in soil Pb level under different land-use types along the urbanization gradient in Beijing, China. We classified the degree of urbanization as the urban core, transitional zone, or suburban area and the land-use type as industrial area, roadside, residential area, institutional area, road greenbelt, park, or forest. Our results showed that the range of soil Pb levels in Beijing is <1 mg/kg-292 mg/kg, with a mean of 22 mg/kg. Along the urbanization gradient, the mean soil Pb level increased from the suburban area to the urban core. Land-use types have an impact on soil Pb levels, however, when the degree of urbanization is considered, the impact from land use on soil Pb level was only significant in the transitional zone. Parks and road greenbelts were found to have lower soil Pb, primarily due to soil restoration. Roadside and residential areas were found to have higher soil Pb because of traffic emissions, leaded paint, and previous industrial contamination. In the urban core and suburban area, the soil Pb level showed no significant differences among various land-use types. Given the results of soil Pb in various land-use types, we suggest that future studies consider the urbanization gradient in which different land-use samples are located.

[Effects of land use type on the distribution of organic carbon in different sized soil particles effects of land use type on the distribution of organic carbon in different sized soil particles and its relationships to herb biomass in hilly red soil region of South China].

PubMed

Li, Zhong-Wu; Guo, Wang; Wang, Xiao-Yan; Shen, Wei-Ping; Zhang, Xue; Chen, Xiao-Lin; Zhang, Yue-Nan

2012-04-01

The changes in organic carbon content in different sized soil particles under different land use patterns partly reflect the variation of soil carbon, being of significance in revealing the process of soil organic carbon cycle. Based on the long-term monitoring of soil erosion, and by the methods of soil particle size fractionation, this paper studied the effects of different land use types (wasteland, pinewood land, and grassland) on the distribution of organic carbon content in different sized soil particles and its relationships to the herb biomass. Land use type and slope position had obvious effects on the organic carbon content in different sized soil particles, and the organic carbon content was in the order of grassland > pinewood land > wasteland. The proportion of the organic carbon in different sized soil particles was mainly depended on the land use type, and had little relationships with slope position. According to the analysis of the ratio of particle-associated organic carbon to mineral-associated organic carbon (POC/MOC), the soil organic carbon in grassland was easily to be mineralized, whereas that in wasteland and pinewood land was relatively stable. On the slopes mainly in hilly red soil region, the soil organic carbon in sand fraction had great effects on herb biomass.

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

DOE PAGES

Winston, Max E.; Hampton-Marcell, Jarrad; Zarraonaindia, Iratxe; ...

2014-06-16

Understanding microbial partnerships with the medicinally and economically important crop Cannabis has the potential to affect agricultural practice by improving plant fitness and production yield. Furthermore, Cannabis presents an interesting model to explore plant-microbiome interactions as it produces numerous secondary metabolic compounds. Here we present the first description of the endorhiza-, rhizosphere-, and bulk soil-associated microbiome of five distinct Cannabis cultivars. Bacterial communities of the endorhiza showed significant cultivar-specificity. When controlling cultivar and soil type the microbial community structure was significantly different between plant cultivars, soil types, and between the endorhiza, rhizosphere and soil. In conclusion, the influence of soilmore » type, plant cultivar and sample type differentiation on the microbial community structure provides support for a previously published two-tier selection model, whereby community composition across sample types is determined mainly by soil type, while community structure within endorhiza samples is determined mainly by host cultivar.« less

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

DOE Office of Scientific and Technical Information (OSTI.GOV)

Winston, Max E.; Hampton-Marcell, Jarrad; Zarraonaindia, Iratxe

Understanding microbial partnerships with the medicinally and economically important crop Cannabis has the potential to affect agricultural practice by improving plant fitness and production yield. Furthermore, Cannabis presents an interesting model to explore plant-microbiome interactions as it produces numerous secondary metabolic compounds. Here we present the first description of the endorhiza-, rhizosphere-, and bulk soil-associated microbiome of five distinct Cannabis cultivars. Bacterial communities of the endorhiza showed significant cultivar-specificity. When controlling cultivar and soil type the microbial community structure was significantly different between plant cultivars, soil types, and between the endorhiza, rhizosphere and soil. In conclusion, the influence of soilmore » type, plant cultivar and sample type differentiation on the microbial community structure provides support for a previously published two-tier selection model, whereby community composition across sample types is determined mainly by soil type, while community structure within endorhiza samples is determined mainly by host cultivar.« less

Moisture and vegetation controls on decadal-scale accrual of soil organic carbon and total nitrogen in restored grasslands

USGS Publications Warehouse

O'Brien, S. L.; Jastrow, J.D.; Grimley, D.A.; Gonzalez-Meler, M. A.

2010-01-01

Revitalization of degraded landscapes may provide sinks for rising atmospheric CO2, especially in reconstructed prairies where substantial belowground productivity is coupled with large soil organic carbon (SOC) deficits after many decades of cultivation. The restoration process also provides opportunities to study the often-elusive factors that regulate soil processes. Although the precise mechanisms that govern the rate of SOC accrual are unclear, factors such as soil moisture or vegetation type may influence the net accrual rate by affecting the balance between organic matter inputs and decomposition. A resampling approach was used to assess the control that soil moisture and plant community type each exert on SOC and total nitrogen (TN) accumulation in restored grasslands. Five plots that varied in drainage were sampled at least four times over two decades to assess SOC, TN, and C4- and C3-derived C. We found that higher long-term soil moisture, characterized by low soil magnetic susceptibility, promoted SOC and TN accrual, with twice the SOC and three times the TN gain in seasonally saturated prairies compared with mesic prairies. Vegetation also influenced SOC and TN recovery, as accrual was faster in the prairies compared with C3-only grassland, and C4-derived C accrual correlated strongly to total SOC accrual but C3-C did not. High SOC accumulation at the surface (0-10 cm) combined with losses at depth (10-20 cm) suggested these soils are recovering the highly stratified profiles typical of remnant prairies. Our results suggest that local hydrology and plant community are critical drivers of SOC and TN recovery in restored grasslands. Because these factors and the way they affect SOC are susceptible to modification by climate change, we contend that predictions of the C-sequestration performance of restored grasslands must account for projected climatic changes on both soil moisture and the seasonal productivity of C4 and C3 plants. ?? 2009 Blackwell Publishing Ltd.

Bioaccumulation and enantioselectivity of type I and type II pyrethroid pesticides in earthworm.

PubMed

Chang, Jing; Wang, Yinghuan; Wang, Huili; Li, Jianzhong; Xu, Peng

2016-02-01

In this study, the bioavailability and enantioselectivity differences between bifenthrin (BF, typeⅠpyrethroid) and lambad-cyhalothrin (LCT, type Ⅱ pyrethroid) in earthworm (Eisenia fetida) were investigated. The bio-soil accumulation factors (BSAFs) of BF was about 4 times greater than that of LCT. LCT was degraded faster than BF in soil while eliminated lower in earthworm samples. Compound sorption plays an important role on bioavailability in earthworm, and the soil-adsorption coefficient (K(oc)) of BF and LCT were 22 442 and 42 578, respectively. Metabolic capacity of earthworm to LCT was further studied as no significant difference in the accumulation of LCT between the high and low dose experiment was found. 3-phenoxybenzoic acid (PBCOOH), a metabolite of LCT produced by earthworm was detected in soil. The concentration of PBCOOH at high dose exposure was about 4.7 times greater than that of in low dose level at the fifth day. The bioaccumulation of BF and LCT were both enantioselective in earthworm. The enantiomer factors of BF and LCT in earthworm were approximately 0.12 and 0.65, respectively. The more toxic enantiomers ((+)-BF and (-)-LCT) had a preferential degradation in earthworm and leaded to less toxicity on earthworm for racemate exposure. In combination with other studies, a liner relationship between Log BSAF(S) and Log K(ow) was observed, and the Log BSAF(S) decreased with the increase of Log K(ow). Copyright © 2015 Elsevier Ltd. All rights reserved.

Effects of anthropogenic particles on the chemical and geophysical properties of urban soils, Detroit, Michigan

NASA Astrophysics Data System (ADS)

Orlicki, Katharine M.

There is a great need in many cities for a better quality of urban soil maps. This is due to the increasing interest in repurposing vacant land for urban redevelopment, agriculture, and green infrastructure. Mapping vacant urban land in Detroit can be very difficult because anthropogenic soils were often highly variable and frequently contained demolition debris (such as brick), making it difficult to use a hand auger. This study was undertaken in Detroit, MI to create a more efficient way to map urban soils based on their geophysical and chemical properties. This will make the mapping process faster, less labor intensive, and therefore more cost effective. Optical and chemical criteria for the identification and classification of microartifacts (MAs) were made from a set of reference artifacts of a known origin. These MAs were then observed and tested in urban topsoil samples from sites in Detroit, Michigan that represent three different land use types (residential demolition, fly ash-impacted, and industrial). Optical analyses, SEM, EDAX, and XRD showed that reference MAs may be classified into five basic compositional types (carbonaceous, calcareous, siliceous, ferruginous and miscellaneous). Reference MAs were generally distinguishable using optical microscopy by color, luster, fracture and microtexture. MAs that were more difficult to classify were further differentiable when using SEM, EDAX, and XRD. MAs were found in all of the anthropogenic soils studied, but were highly variable. All three study sites had concentrations coal-related wastes were the most common types of MAs observed and often included coal, ash (microspheres, microagglomerate), cinders, and burnt shale. MAs derived from waste building materials such as brick, mortar, and glass, were typically found on residential demolition sites. Manufacturing waste MAs, which included iron-making slag and coked coal were commonly observed on industrial sites. Fly ash-impacted sites were composed of only microspheres and microagglomerate that were concentrated within the soils by airborne deposition, making it widespread. These results support the hypothesis that MA assemblages of distinct composition vary with land use. Therefore, it seems likely that magnetic susceptibility surveying and other geophysical methods will prove effective for mapping anthropogenic soils on vacant urban land. Anthropogenic soils and MAs were assessed for pH, electrical conductivity (EC), and magnetic susceptibility (MS). The A horizons of urban soils at residential demolition, industrial-impacted, and fly ash-impacted sites were found to be distinguishable from those of native soils. Anthropogenic soils were higher by one pH unit or more than the background level, had an EC value two to three times the background level, and had MS measurements up to 20 times greater than the background level. The analysis of reference artifacts suggested that the elevated pH of anthropogenic soils was caused by calcareous building material wastes, the elevated EC were the result of both calcareous and ferruginous wastes, and elevated MS were attributable to ferromagnetic materials. Anthropogenic soils collected at residential demolition sites were differentiable by EC, whereas those at collected form industrial sites were distinguishable using MS. Therefore, anthropogenic soils and native soils have a unique chemical and geophysical signature which can be highly dependent on the concentration of MAs. This suggests that EC and MS surveying methods may be used to remotely sense and map urban soils more effectively than using traditional methods alone.

Sorption of mercury in soils with different humus content

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lodenius, M.; Seppaenen, A.; Autio S.

The strong sorption of mercury to humic matter in soil and water has raised the question about the influence of organic matter of different soil types on the mobilization of mercury from soil. Mercury is normally bound to humic and fulvic acids, which may be released in connection with flooding, draining and ditching. High mercury contents in fish from man-made lakes have been reported mainly from temperated regions. This has been assumed to be a result of the slower metabolism of methyl mercury in cool water but the effect of temperature on the mobilization process is still poorly known. Themore » sorption and leaching of mercury in three different soils was studied in vitro using a mercury concentrations near the natural level. Soil lysimeters were watered with distilled water or artificial acid rain at two temperatures.« less

As(V) and P Competitive Sorption on Soils, By-Products and Waste Materials

PubMed Central

Rivas-Pérez, Ivana María; Paradelo-Núñez, Remigio; Nóvoa-Muñoz, Juan Carlos; Arias-Estévez, Manuel; Fernández-Sanjurjo, María José; Álvarez-Rodríguez, Esperanza; Núñez-Delgado, Avelino

2015-01-01

Batch-type experiments were used to study competitive As(V) and P sorption on various soils and sorbent materials. The materials assayed were a forest soil, a vineyard soil, pyritic material, granitic material, coarsely and finely ground mussel shell, calcinated mussel shell ash, pine sawdust and slate processing fines. Competition between As(V) and P was pronounced in the case of both soils, granitic material, slate fines, both shells and pine sawdust, showing more affinity for P. Contrary, the pyritic material and mussel shell ash showed high and similar affinity for As(V) and P. These results could be useful to make a correct use of the soils and materials assayed when focusing on As and P removal in solid or liquid media, in circumstances where both pollutants may compete for sorption sites. PMID:26690456

Correlation of soil microbes and soil micro-environment under long-term safflower (Carthamus tinctorius L.) plantation in China.

PubMed

Lu, Shuang; Quan, Wang; Wang, Shao-Ming; Liu, Hong-Ling; Tan, Yong; Zeng, Guang-Ping; Zhang, Xia

2013-04-01

Microbial community structure and ecological functions are influenced by interactions between above and belowground biota. There is an urgent need for intensive monitoring of microbes feedback of soil micro-ecosystem for setting up a good agricultural practice. Recent researches have revealed that many soils characteristic can effect microbial community structure. In the present study factors affecting microbial community structure and soil in Carthamus tinctorius plantations in arid agricultural ecosystem of northern Xinjiang, China were identified. The result of the study revealed that soil type was the key factor in safflower yield; Unscientific field management resulted high fertility level (bacteria dominant) of soil to turn to low fertility level (fungi dominant), and Detruded Canonical Correspondence Analysis (DCCA) showed that soil water content, organic matter, available N, P and K were the dominant factors affecting distribution of microbial community. Soil water content showed a significant positive correlation with soil microbes quantity (P < 0.01), while others showed a significant quantity correlation with soil microbe quantity (P < 0.05).

Structural and functional diversity of soil bacterial and fungal communities following woody plant encroachment in the southern Great Plains

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hollister, Emily B; Schadt, Christopher Warren; Palumbo, Anthony Vito

In the southern Great Plains (USA), encroachment of grassland ecosystems by Prosopis glandulosa (honey mesquite) is widespread. Mesquite encroachment alters net primary productivity, enhances stores of C and N in plants and soil, and leads to increased levels of soil microbial biomass and activity. While mesquite's impact on the biogeochemistry of the region is well established, it effects on soil microbial diversity and function are unknown. In this study, soils associated with four plant types (C{sub 3} perennial grasses, C{sub 4} midgrasses, C{sub 4} shortgrasses, and mesquite) from a mesquite-encroached mixed grass prairie were surveyed to in an attempt tomore » characterize the structure, diversity, and functional capacity of their soil microbial communities. rRNA gene cloning and sequencing were used in conjunction with the GeoChip functional gene array to evaluate these potential differences. Mesquite soil supported increased bacterial and fungal diversity and harbored a distinct fungal community relative to other plant types. Despite differences in composition and diversity, few significant differences were detected with respect to the potential functional capacity of the soil microbial communities. These results may suggest that a high level of functional redundancy exists within the bacterial portion of the soil communities; however, given the bias of the GeoChip toward bacterial functional genes, potential functional differences among soil fungi could not be addressed. The results of this study illustrate the linkages shared between above- and belowground communities and demonstrate that soil microbial communities, and in particular soil fungi, may be altered by the process of woody plant encroachment.« less

A modeling approach to soil type and precipitation seasonality interactions on bioenergy crop production

USDA-ARS?s Scientific Manuscript database

Precipitation limits primary production by affecting soil moisture, and soil type interacts with soil moisture to determine soil water availability to plants. We used ALMANAC, a process-based model, to simulate switchgrass (Panicum virgatum var. Alamo) biomass production in Central Texas under thre...

[Effects of land use change on soil active organic carbon in deep soils in Hilly Loess Plateau region of Northwest China].

PubMed

Zhang, Shuai; Xu, Ming-Xiang; Zhang, Ya-Feng; Wang, Chao-Hua; Chen, Gai

2015-02-01

Response of soil active organic carbon to land-use change has become a hot topic in current soil carbon and nutrient cycling study. Soil active organic carbon distribution characteristics in soil profile under four land-use types were investigated in Ziwuling forest zone of the Hilly Loess Plateau region. The four types of land-use changes included natural woodland converted into artificial woodland, natural woodland converted into cropland, natural shrubland converted into cropland and natural shrubland converted into revegetated grassland. Effects of land-use changes on soil active organic carbon in deep soil layers (60-200 cm) were explored by comparison with the shallow soil layers (0-60 cm). The results showed that: (1) The labile organic carbon ( LOC) and microbial carbon (MBC) content were mainly concentrated in the shallow 0-60 cm soil, which accounted for 49%-66% and 71%-84% of soil active organic carbon in the profile (0-200 cm) under different land-use types. Soil active organic carbon content in shallow soil was significantly varied for the land-use changes types, while no obvious difference was observed in soil active organic carbon in deep soil layer. (2) Land-use changes exerted significant influence on soil active organic carbon, the active organic carbon in shallow soil was more sensitive than that in deep soil. The four types of land-use changes, including natural woodland to planted woodland, natural woodland to cropland, natural shrubland to revegetated grassland and natural shrubland to cropland, LOC in shallow soil was reduced by 10%, 60%, 29%, 40% and LOC in the deep layer was decreased by 9%, 21%, 12%, 1%, respectively. MBC in the shallow soil was reduced by 24% 73%, 23%, 56%, and that in the deep layer was decreased by 25%, 18%, 8% and 11%, respectively. (Land-use changes altered the distribution ratio of active organic carbon in soil profile. The ratio between LOC and SOC in shallow soil increased when natural woodland and shrubland were converted into farmland, but no obvious difference was observed in deep soil. The ratio of MBC/SOC in shallow soil decreased when natural shrubland was converted into farmland, also, no significant difference was detected in the ratio of MBC/SOC for other land-use change types. The results suggested that land-use change exerted significant influence on soil active organic carbon content and distribution proportion in soil profile. Soil organic carbon in deep soil was more stable than that in shallow soil.

Does the presence of large down wood at the time of a forest fire impact soil recovery?

DOE PAGES

Smith, Jane E.; Kluber, Laurel A.; Jennings, Tara N.; ...

2017-02-23

Fire may remove or create dead wood aboveground, but it is less clear how high severity burning of soils affects belowground microbial communities and soil processes, and for how long. Here, we investigated soil fungal and bacterial communities and biogeochemical responses of severely burned red soil and less severely burned black soil from a burned forest on the eastern slope of the Cascade Range in Oregon. We examined the effects of burn severity on soil nutrients and microbial communi- ties for 14 years after wildfire. Soil nutrients were significantly reduced in red soils. Soil fungi and bac teria, assessed withmore » molecular methods, steadily colonized both burn severities and soil biodiversity increased throughout the study showing that microbial communities seem to have the capacity to quickly adjust to extreme disturbances. Although richness did not vary by soil type, the fungal and bacterial community compositions varied with burn severity. This difference was greatest in the early time points following the fire and decreased with time. But, nutrient-limited conditions of red soils were detected for four years after the wildfire and raise concern about soil productivity at these sites.« less

Does the presence of large down wood at the time of a forest fire impact soil recovery?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smith, Jane E.; Kluber, Laurel A.; Jennings, Tara N.

Fire may remove or create dead wood aboveground, but it is less clear how high severity burning of soils affects belowground microbial communities and soil processes, and for how long. Here, we investigated soil fungal and bacterial communities and biogeochemical responses of severely burned red soil and less severely burned black soil from a burned forest on the eastern slope of the Cascade Range in Oregon. We examined the effects of burn severity on soil nutrients and microbial communi- ties for 14 years after wildfire. Soil nutrients were significantly reduced in red soils. Soil fungi and bac teria, assessed withmore » molecular methods, steadily colonized both burn severities and soil biodiversity increased throughout the study showing that microbial communities seem to have the capacity to quickly adjust to extreme disturbances. Although richness did not vary by soil type, the fungal and bacterial community compositions varied with burn severity. This difference was greatest in the early time points following the fire and decreased with time. But, nutrient-limited conditions of red soils were detected for four years after the wildfire and raise concern about soil productivity at these sites.« less

Turning soil survey data into digital soil maps in the Energy Region Eger Research Model Area

NASA Astrophysics Data System (ADS)

Pásztor, László; Dobos, Anna; Kürti, Lívia; Takács, Katalin; Laborczi, Annamária

2015-04-01

Agria-Innoregion Knowledge Centre of the Eszterházy Károly College has carried out targeted basic researches in the field of renewable energy sources and climate change in the framework of TÁMOP-4.2.2.A-11/1/KONV project. The project has covered certain issues, which require the specific knowledge of the soil cover; for example: (i) investigation of quantitative and qualitative characteristics of natural and landscape resources; (ii) determination of local amount and characteristics of renewable energy sources; (iii) natural/environmental risk analysis by surveying the risk factors. The Energy Region Eger Research Model Area consists of 23 villages and is located in North-Hungary, at the Western part of Bükkalja. Bükkalja is a pediment surface with erosional valleys and dense river network. The diverse morphology of this area results diversity in soil types and soil properties as well. There was large-scale (1:10,000 and 1:25,000 scale) soil mappings in this area in the 1960's and 1970's which provided soil maps, but with reduced spatial coverage and not with fully functional thematics. To achive the recent tasks (like planning suitable/optimal land-use system, estimating biomass production and development of agricultural and ecomonic systems in terms of sustainable regional development) new survey was planned and carried out by the staff of the College. To map the soils in the study area 10 to 22 soil profiles were uncovered per settlement in 2013 and 2014. Field work was carried out according to the FAO Guidelines for Soil Description and WRB soil classification system was used for naming soils. According to the general goal of soil mapping the survey data had to be spatially extended to regionalize the collected thematic local knowledge related to soil cover. Firstly three thematic maps were compiled by digital soil mapping methods: thickness of topsoil, genetic soil type and rate of surface erosion. High resolution digital elevation model, Earth observation imagery, geology and land cover maps were used as spatial ancillary environmental variables related to soil forming processes. Regression kriging (RK) has been used for the spatial inference of quantitative data (thickness of topsoil); classification and regression trees (CART) were applied for the spatial inference of category type information (genetic soil type and rate of surface erosion) with the aid of the available and properly preprocessed auxiliary co-variables. The applied spatial resolution was 25 meters. The deduced digital soil maps hopefully will significantly promote to plan sustainable economic model in the region which can provide protection and regeneration of local natural conditions and potentials for local inhabitants for a long time. Acknowledgement: Our work was supported by the Hungarian National Scientific Research Foundation (OTKA, Grant No. K105167) and TÁMOP-4.2.2.A-11/1/KONV project.

Soil properties and not inputs control carbon, nitrogen, phosphorus ratios in cropped soils in the long-term

NASA Astrophysics Data System (ADS)

Frossard, E.; Buchmann, N.; Bünemann, E. K.; Kiba, D. I.; Lompo, F.; Oberson, A.; Tamburini, F.; Traoré, O. Y. A.

2015-09-01

Stoichiometric approaches have been applied to understand the relationship between soil organic matter dynamics and biological nutrient transformations. However, very few studies explicitly considered the effects of agricultural management practices on soil C : N : P ratio. The aim of this study was to assess how different input types and rates would affect the C : N : P molar ratios of bulk soil, organic matter and microbial biomass in cropped soils in the long-term. Thus, we analysed the C, N and P inputs and budgets as well as soil properties in three long-term experiments established on different soil types: the Saria soil fertility trial (Burkina Faso), the Wagga Wagga rotation/stubble management/soil preparation trial (Australia), and the DOK cropping system trial (Switzerland). In each of these trials, there was a large range of C, N and P inputs which had a strong impact on element concentrations in soils. However, although C : N : P ratios of the inputs were highly variable, they had only weak effects on soil C : N : P ratios. At Saria, a positive correlation was found between the N : P ratio of inputs and microbial biomass, while no relation was observed between the nutrient ratios of inputs and soil organic matter. At Wagga Wagga, the C : P ratio of inputs was significantly correlated to total soil C : P, N : P and C : N ratios, but had no impact on the elemental composition of microbial biomass. In the DOK trial, a positive correlation was found between the C budget and the C to organic P ratio in soils, while the nutrient ratios of inputs were not related to those in the microbial biomass. We argue that these responses are due to differences in soil properties among sites. At Saria, the soil is dominated by quartz and some kaolinite, has a coarse texture, a fragile structure and a low nutrient content. Thus, microorganisms feed on inputs (plant residues, manure). In contrast, the soil at Wagga Wagga contains illite and haematite, is richer in clay and nutrients and has a stable structure. Thus, organic matter is protected from mineralization and can therefore accumulate, allowing microorganisms to feed on soil nutrients and to keep a constant C : N : P ratio. The DOK soil represents an intermediate situation, with high nutrient concentrations, but a rather fragile soil structure, where organic matter does not accumulate. We conclude that the study of C, N, and P ratios is important to understand the functioning of cropped soils in the long-term, but that it must be coupled with a precise assessment of element inputs and budgets in the system and a good understanding of the ability of soils to stabilize C, N and P compounds.

Soil functional types: surveying the biophysical dimensions of soil security

NASA Astrophysics Data System (ADS)

Cécillon, Lauric; Barré, Pierre

2015-04-01

Soil is a natural capital that can deliver key ecosystem services (ES) to humans through the realization of a series of soil processes controlling ecosystem functioning. Soil is also a diverse and endangered natural resource. A huge pedodiversity has been described at all scales, which is strongly altered by global change. The multidimensional concept soil security, encompassing biophysical, economic, social, policy and legal frameworks of soils has recently been proposed, recognizing the role of soils in global environmental sustainability challenges. The biophysical dimensions of soil security focus on the functionality of a given soil that can be viewed as the combination of its capability and its condition [1]. Indeed, all soils are not equal in term of functionality. They show different processes, provide different ES to humans and respond specifically to global change. Knowledge of soil functionality in space and time is thus a crucial step towards the achievement soil security. All soil classification systems incorporate some functional information, but soil taxonomy alone cannot fully describe the functioning, limitations, resistance and resilience of soils. Droogers and Bouma [2] introduced functional variants (phenoforms) for each soil type (genoform) so as to fit more closely to soil functionality. However, different genoforms can have the same functionality. As stated by McBratney and colleagues [1], there is a great need of an agreed methodology for defining the reference state of soil functionality. Here, we propose soil functional types (SFT) as a relevant classification system for the biophysical dimensions of soil security. Following the definition of plant functional types widely used in ecology, we define a soil functional type as "a set of soil taxons or phenoforms sharing similar processes (e.g. soil respiration), similar effects on ecosystem functioning (e.g. primary productivity) and similar responses to global change (land-use, management or climate) for a particular soil-provided ecosystem service (e.g. climate regulation)". One SFT can thus include several soil types having the same functionality for a particular soil-provided ES. Another consequence is that SFT maps for two different ES may not superimpose over the same area, since some soils may fall in the same SFT for a service and in different SFT for another one. Soil functional types could be assessed and monitored in space and time by a combination of soil functional traits that correspond to inherent and manageable properties of soils. Their metrology would involve either classic (pedological observations) or advanced (molecular ecology, spectrometry, geophysics) tools. SFT could be studied and mapped at all scales, depending on the purpose of the soil security assessment (e.g. global climate modeling, land planning and management, biodiversity conservation). Overall, research is needed to find a pathway from soil pedological maps to SFT maps which would yield important benefits towards the assessment and monitoring of soil security. Indeed, this methodology would allow (i) reducing the spatial uncertainty on the assessment of ES; (ii) identifying and mapping multifunctional soils, which may be the most important soil resource to preserve. References [1] McBratney et al., 2014. Geoderma 213:203-213. [2] Droogers P, Bouma J, 1997. SSSAJ 61:1704-1710.

On the use of L-band microwave and multi-mission EO data for high resolution soil moisture

NASA Astrophysics Data System (ADS)

Bitar, Ahmad Al; Merlin, Olivier; Malbeteau, Yoann; Molero-Rodenas, Beatriz; Zribi, Mehrez; Sekhar, Muddu; Tomer, Sat Kumar; José Escorihuela, Maria; Stefan, Vivien; Suere, Christophe; Mialon, Arnaud; Kerr, Yann

2017-04-01

Sub-kilometric soil moisture maps have been increasingly mentioned as a need in the scientific community for many applications ranging from agronomical and hydrological (Wood et al. 2011). For example, this type of dataset will become essential to support the current evolution of the land surface and hydrologic modelling communities towards high resolution global modelling. But the ability of the different sensors to monitor soil moisture is different. The L-Band microwave EO provides, at a coarse resolution, the most sensitive information to surface soil moisture when compared to C-Band microwave, optical or C-band SAR. On the other hand the optical and radar sensors provide the spatial distribution of associated variables like surface soil moisture,surface temperature or vegetation leaf area index. This paper describes two complementary fusion approaches to obtain such data from optical or SAR in combination to microwave EO, and more precisely L-Band microwave from the SMOS mission. The first approach, called MAPSM, is based on the use of high resolution soil moisture from SAR and microwave. The two types of sensors have all weather capabilities. The approach uses the new concept of water change capacity (Tomer et al. 2015, 2016). It has been applied to the Berambadi watershed in South-India which is characterised by high cloud coverage. The second approach, called Dispatch, is based on the use of optical sensors in a physical disaggregation approach. It is a well-established approach (Merlin et al. 2012, Malbeteau et al. 2015) that has been implemented operationally in the CATDS (Centre Aval de Traitement des Données SMOS) processing centre (Molero et al. 2016). An analysis on the complementarity of the approaches is discussed. The results show the performances of the methods when compared to existing soil moisture monitoring networks in arid, sub-tropical and humid environments. They emphasis on the need for large inter-comparison studied for the qualification of such products on different climatic zones and on the need of an adaptative multisensor approach. The availability of the recent Sentinel-1 2 and 3 missions from ESA provides an exceptional environment to apply such algorithms at larger scales.

Cascading effects of predator-detritivore interactions depend on environmental context in a Tibetan alpine meadow.

PubMed

Wu, Xinwei; Griffin, John N; Sun, Shucun

2014-05-01

Studies of grazing food webs show that species traits can interact with environmental factors to determine the strength of trophic cascades, but analogous context dependencies in detrital food webs remain poorly understood. In predator-detritivore-plant interaction chains, predators are expected to indirectly suppress plant biomass by reducing the density of plant-facilitating detritivores. However, this outcome can be reversed where above-ground predators drive burrowing detritivores to lower soil levels, strengthening their plant-facilitating effects. Here, we show that these trait-mediated indirect interactions further depend on environmental context in a Tibetan alpine meadow. In our study system, undulating topography generates higher (dry soil) patches interspersed with lower (wet soil) patches. Because the ability of detritivores to form deep burrows is likely to be limited by oxygen availability in low patches (wet soil), we hypothesized that (i) burrowing detritivores would undergo a vertical habitat shift, allowing them to more effectively avoid predation, in high - but not low - patches, and (ii) this shift would transmit positive effects of predators to plants in high patches by improving conditions in the lower soil layer. We tested these hypotheses using complementary field and glasshouse experiments examining whether the cascading effects of above-ground predatory beetles (presence/absence) on the density and behaviour of tunnel-forming detritivorous beetles, soil properties, and plant growth varied with patch type (low/high). Results revealed that predatory beetles did not reduce the density of detritivores in either patch type but had context-dependent trait-mediated effects, increasing the tunnelling depth of detritivores, improving soil conditions and ultimately increasing plant biomass in the high but not low patches. This study adds to an emerging predictive framework linking predators to plants in detritus food webs, demonstrating that these indirect interactions depend not just on the relative habitat domains of predators and prey, but also on environmental conditions that can predictably constrain the behavioural response of detritivores to predation risk. © 2013 The Authors. Journal of Animal Ecology © 2013 British Ecological Society.

The wettability of selected organic soils in Poland

NASA Astrophysics Data System (ADS)

Całka, A.; Hajnos, M.

2009-04-01

The wettability was measured in the laboratory by means of two methods: Water Drop Penetration Time (WDPT) test and Thin Column Wicking (TCW) method. WDPT is fast and simple method and was used to investigate potential water repellency of analyzed samples. TCW is an indirect method and was used to determine contact angles and surface free energy components. The measurement was performed in horizontal teflon chambers for thin-layer chromatography, adapted for tubes 10 cm long. The experiment was carried out on muck soils (samples were taken from two levels of soil profile: 0-20 cm and 20-40 cm) and peat soils. There were two types of peats: low-moor peats and high moor peats. Samples of low-moor peats were taken from level 25-75 cm (alder peat) and 75-125cm (sedge peat) and 25-75 cm (peloid peat). Samples of high moor peats from level 25-175 cm (sphagnum peat) and 175-225 cm (sphagnum peat with Eriophorum). There was found no variability in persistence of potential water repellency but there were differences in values of contact angles of individual soil samples. Both muck and peat samples are extremely water repellent soils. Water droplets persisted on the surface of soils for more than 24 hours. Contact angles and surface free energy components for all samples were differentiated. Ranges of water contact angles for organic soils are from 27,54o to 96,50o. The highest values of contact angles were for sphagnum peats, and the lowest for muck soil from 20-40 cm level. It means, that there are differences in wettability between these samples. Muck soil is the best wettable and sphagnum peats is the worst wettable soil. If the content of organic compounds in the soil exceeds 40% (like in peats), the tested material displays only dispersion-type interactions. Therefore for peat soils, the technique of thin column wicking could only be used to determine the dispersive component γiLW. For muck soils it was also determined electron-acceptor (Lewis acid) γ+ and electron-donor (Lewis base) γ- surface free energy components. The authors gratefully acknowledge the Ministry of Science and Higher Education for financial support of this work (grant No. N N310 149335).

Differential controls on soil carbon density and mineralization among contrasting forest types in a temperate forest ecosystem.

PubMed

You, Ye-Ming; Wang, Juan; Sun, Xiao-Lu; Tang, Zuo-Xin; Zhou, Zhi-Yong; Sun, Osbert Jianxin

2016-03-01

Understanding the controls on soil carbon dynamics is crucial for modeling responses of ecosystem carbon balance to global change, yet few studies provide explicit knowledge on the direct and indirect effects of forest stands on soil carbon via microbial processes. We investigated tree species, soil, and site factors in relation to soil carbon density and mineralization in a temperate forest of central China. We found that soil microbial biomass and community structure, extracellular enzyme activities, and most of the site factors studied varied significantly across contrasting forest types, and that the associations between activities of soil extracellular enzymes and microbial community structure appeared to be weak and inconsistent across forest types, implicating complex mechanisms in the microbial regulation of soil carbon metabolism in relation to tree species. Overall, variations in soil carbon density and mineralization are predominantly accounted for by shared effects of tree species, soil, microclimate, and microbial traits rather than the individual effects of the four categories of factors. Our findings point to differential controls on soil carbon density and mineralization among contrasting forest types and highlight the challenge to incorporate microbial processes for constraining soil carbon dynamics in global carbon cycle models.

Differential controls on soil carbon density and mineralization among contrasting forest types in a temperate forest ecosystem

PubMed Central

You, Ye-Ming; Wang, Juan; Sun, Xiao-Lu; Tang, Zuo-Xin; Zhou, Zhi-Yong; Sun, Osbert Jianxin

2016-01-01

Understanding the controls on soil carbon dynamics is crucial for modeling responses of ecosystem carbon balance to global change, yet few studies provide explicit knowledge on the direct and indirect effects of forest stands on soil carbon via microbial processes. We investigated tree species, soil, and site factors in relation to soil carbon density and mineralization in a temperate forest of central China. We found that soil microbial biomass and community structure, extracellular enzyme activities, and most of the site factors studied varied significantly across contrasting forest types, and that the associations between activities of soil extracellular enzymes and microbial community structure appeared to be weak and inconsistent across forest types, implicating complex mechanisms in the microbial regulation of soil carbon metabolism in relation to tree species. Overall, variations in soil carbon density and mineralization are predominantly accounted for by shared effects of tree species, soil, microclimate, and microbial traits rather than the individual effects of the four categories of factors. Our findings point to differential controls on soil carbon density and mineralization among contrasting forest types and highlight the challenge to incorporate microbial processes for constraining soil carbon dynamics in global carbon cycle models. PMID:26925871

The role of waste thermal water in the soil degradation

NASA Astrophysics Data System (ADS)

Balog, Kitti; Farsang, Andrea

2010-05-01

Thermal water exploitation is widespread, because it is considered to a "green" renewable energy source, the transporter of the Earth crust's heat. It is suitable for very diverse purposes: balneology, heating, mineral water, municipal hot water supply, technological water, etc. After usage, large amount of thermal water becomes sewage water with high concentrations of salts, heavy metals, ammonia, nitrate, and high temperature. Besides that, most of these waters have an unfavourable ion composition. Na+ (and in some cases Mg+) is predominant among cations. A common way of treatment is to let off the waste thermal water in unlined ground channels to leak into the soil. This can cause physical and chemical soil degradation. Continouos Na+ supply occurs, that occupies the place of Ca2+ on the ion exchange surfaces. Thus, adverse effects of Na+ can appear, like formation of extreme moisture regime, peptization, liquefaction. Beside Na+, Mg2+ also helps the formation of physical degradation in the soil. High water retain and unfavourable structure evolves. Not only the physical features of the soil are touched, fertility of production sites as well. Namely sorrounding the unlined ground channels, agricultural areas are seated, so it is important to protect productivity of the soil to maintain yield. Because of the seepage of high salt concentration waters, salt accumulation can be observed near to the channel lines. The investigated sample sites are located in the Great Hungarian Plane. We determined the main pollutants of the thermal waters, and the effects to the sorrounding soils. On two selected investigation areas (Cserkeszőlő, Tiszakécske) salt profiles and Na+ adsorption isotherms are presented to characterize soil degradation. Genetic soil types are differ on the investigated areas, so the aspect of impact is different, as well.

NO gas loss from biologically crusted soils in Canyonlands National Park, Utah

USGS Publications Warehouse

Barger, N.N.; Belnap, J.; Ojima, D.S.; Mosier, A.

2005-01-01

In this study, we examined N gas loss as nitric oxide (NO) from N-fixing biologically crusted soils in Canyonlands National Park, Utah. We hypothesized that NO gas loss would increase with increasing N fixation potential of the biologically crusted soil. NO fluxes were measured from biologically crusted soils with three levels of N fixation potential (Scytonema-Nostoc-Collema spp. (dark)>Scytonema-Nostoc-Microcoleus spp. (medium)>Microcoleus spp. (light)) from soil cores and field chambers. In both cores and field chambers there was a significant effect of crust type on NO fluxes, but this was highly dependent on season. NO fluxes from field chambers increased with increasing N fixation potential of the biologically crusted soils (dark>medium>light) in the summer months, with no differences in the spring and autumn. Soil chlorophyllasis Type a content (an index of N fixation potential), percent N, and temperature explained 40% of the variability in NO fluxes from our field sites. Estimates of annual NO loss from dark and light crusts was 0.04-0.16 and 0.02-0.11-N/ha/year. Overall, NO gas loss accounts for approximately 3-7% of the N inputs via N fixation in dark and light biologically crusted soils. Land use practices have drastically altered biological soil crusts communities over the past century. Livestock grazing and intensive recreational use of public lands has resulted in a large scale conversion of dark cyanolichen crusts to light cyanobacterial crusts. As a result, changes in biologically crusted soils in arid and semi-arid regions of the western US may subsequently impact regional NO loss. ?? Springer 2005.

Laboratory measurements of nitric oxide release from forest soil with a thick organic layer under different understory types

NASA Astrophysics Data System (ADS)

Bargsten, A.; Falge, E.; Pritsch, K.; Huwe, B.; Meixner, F. X.

2010-05-01

Nitric oxide (NO) plays an important role in the photochemistry of the troposphere. NO from soil contributes up to 40% to the global budget of atmospheric NO. Soil NO emissions are primarily caused by biological activity (nitrification and denitrification), that occurs in the uppermost centimeter of the soil, a soil region often characterized by high contents of organic material. Most studies of NO emission potentials to date have investigated mineral soil layers. In our study we sampled soil organic matter under different understories (moss, grass, spruce and blueberries) in a humid mountainous Norway spruce forest plantation in the Fichtelgebirge (Germany). We performed laboratory incubation and flushing experiments using a customized chamber technique to determine the response of net potential NO flux to physical and chemical soil conditions (water content and temperature, bulk density, particle density, pH, C/N ratio, organic C, soil ammonium, soil nitrate). Net potential NO fluxes (in terms of mass of N) from soil samples taken under different understories ranged from 1.7-9.8 ng m-2 s-1 (soil sampled under grass and moss cover), 55.4-59.3 ng m-2 s-1 (soil sampled under spruce cover), and 43.7-114.6 ng m-2 s-1 (soil sampled under blueberry cover) at optimum water content and a soil temperature of 10 °C. The water content for optimum net potential NO flux ranged between 0.76 and 0.8 gravimetric soil moisture for moss covered soils, between 1.0 and 1.1 for grass covered soils, 1.1 and 1.2 for spruce covered soils, and 1.3 and 1.9 for blueberry covered soils. Effects of soil physical and chemical characteristics on net potential NO flux were statistically significant (0.01 probability level) only for NH4+. Therefore, as an alternative explanation for the differences in soil biogenic NO emission we consider more biological factors like understory vegetation type, amount of roots, and degree of mycorrhization; they have the potential to explain the observed differences of net potential NO fluxes.

Foliage response of young central European oaks to air warming, drought and soil type.

PubMed

Günthardt-Goerg, M S; Kuster, T M; Arend, M; Vollenweider, P

2013-01-01

Three Central European oak species, with four provenances each, were experimentally tested in 16 large model ecosystem chambers for their response to passive air warming (AW, ambient +1-2 °C), drought (D, -43 to -60% irrigation) and their combination (AWD) for 3 years on two forest soil types of pH 4 or 7. Throughout the entire experiment, the influence of the different ambient and experimental climates on the oak trees was strong. The morphological traits of the Quercus species were affected in opposing ways in AW and D treatments, with a neutral effect in the AWD treatment. Biochemical parameters and LMA showed low relative plasticity compared to the morphological and growth parameters. The high plasticity in physiologically important parameters of the three species, such as number of intercalary veins or leaf size, indicated good drought acclimation properties. The soil type influenced leaf chlorophyll concentration, C/N and area more than drought, whereas foliage mass was more dependent on drought than on soil type. Through comparison of visible symptom development with the water deficits, a drought tolerance threshold of -1.3 MPa was determined. Although Q. pubescens had xeromorphic leaf characteristics (small leaf size, lower leaf water content, high LMA, pilosity, more chlorophyll, higher C/N) and less response to the treatments than Q. petraea and Q. robur, it suffered more leaf drought injury and shedding of leaves than Q. petraea. However, if foliage mass were used as the criterion for sustainable performance under a future climate, Q. robur would be the most appropriate species. © 2012 German Botanical Society and The Royal Botanical Society of the Netherlands.

Distinct Circular Single-Stranded DNA Viruses Exist in Different Soil Types

PubMed Central

Swanson, Maud M.; Dawson, Lorna; Freitag, Thomas E.; Singh, Brajesh K.; Torrance, Lesley; Mushegian, Arcady R.

2015-01-01

The potential dependence of virus populations on soil types was examined by electron microscopy, and the total abundance of virus particles in four soil types was similar to that previously observed in soil samples. The four soil types examined differed in the relative abundances of four morphological groups of viruses. Machair, a unique type of coastal soil in western Scotland and Ireland, differed from the others tested in having a higher proportion of tailed bacteriophages. The other soils examined contained predominantly spherical and thin filamentous virus particles, but the Machair soil had a more even distribution of the virus types. As the first step in looking at differences in populations in detail, virus sequences from Machair and brown earth (agricultural pasture) soils were examined by metagenomic sequencing after enriching for circular Rep-encoding single-stranded DNA (ssDNA) (CRESS-DNA) virus genomes. Sequences from the family Microviridae (icosahedral viruses mainly infecting bacteria) of CRESS-DNA viruses were predominant in both soils. Phylogenetic analysis of Microviridae major coat protein sequences from the Machair viruses showed that they spanned most of the diversity of the subfamily Gokushovirinae, whose members mainly infect obligate intracellular parasites. The brown earth soil had a higher proportion of sequences that matched the morphologically similar family Circoviridae in BLAST searches. However, analysis of putative replicase proteins that were similar to those of viruses in the Circoviridae showed that they are a novel clade of Circoviridae-related CRESS-DNA viruses distinct from known Circoviridae genera. Different soils have substantially different taxonomic biodiversities even within ssDNA viruses, which may be driven by physicochemical factors. PMID:25841004

Soil physicochemical properties to evaluate soil degradation under different land use types in a high rainfall tropical region: A case study from South Sulawesi, Indonesia

NASA Astrophysics Data System (ADS)

Ahmad, A.; Lopulisa, C.; Imran, A. M.; Baja, S.

2018-05-01

Intensive cropping in the tropical region always becomes one of important driving forces of soil degradation. The primary aim of this study is to analyze the states and the dynamics of soil physicochemical properties to evaluate soil degradation in the tropical region a high rainfall on agricultural areas in South Sulawesi. A number of soil characteristics were analyzed for physical and chemical properties, and clay minerals with X-ray diffractometer. The degree of soil degradation is determined using Wischmeier and Smith equation. This study reveals that mean annual precipitation in 1979-2016 ranged from 1853.15 to 2981.30 mm/year. For land used for paddy field, palm oil, cacao and coffee plantation, the texture dominated with silt loam-clay loam, cation exchange capacity was 18.63-26.32 cmol+ kg-1, 0.98-2.91% of C-organic, 32-55% of base saturation, 0.1-3.5 cm h-1 of permeability, soil clay minerals were montmorillonite-kaolinite-halloysite, and the index erodibility was 0.3-0.5. Land used for mixed plants and shrubs, the texture dominated with silt loam-sandy clay loam, cation exchange capacity was 18.63-27.12 cmol+ kg-1, 1.09-2.89% of C-organic, 32-55% of base saturation, 0.2-4.9 cm/h of permeability, soil clay minerals were kaolinite-halloysite, and index erodibility was 0.1-0.3. Land use for cultivated in the high intensity of rainfall has changed the physicochemical properties of soils, but cultivated in monoculture has at some degree increased soil erodibility.

Root-soil relationships and terroir

NASA Astrophysics Data System (ADS)

Tomasi, Diego

2015-04-01

Soil features, along with climate, are among the most important determinants of a succesful grape production in a certain area. Most of the studies, so far, investigated the above-ground vine response to differente edaphic and climate condition, but it is clearly not sufficient to explain the vine whole behaviour. In fact, roots represent an important part of the terroir system (soil-plant-atmosphere-man), and their study can provide better comprehension of vine responses to different environments. The root density and distribution, the ability of deep-rooting and regenerating new roots are good indicators of root well-being, and represents the basis for an efficient physiological activity of the root system. Root deepening and distribution are strongly dependent and sensitive on soil type and soil properties, while root density is affected mostly by canopy size, rootstock and water availability. According to root well-being, soil management strategies should alleviate soil impediments, improving aeration and microbial activity. Moreover, agronomic practices can impact root system performance and influence the above-ground growth. It is well known, for example, that the root system size is largely diminished by high planting densities. Close vine spacings stimulate a more effective utilization of the available soil, water and nutrients, but if the competition for available soil becomes too high, it can repress vine growth, and compromise vineyard longevity, productivity and reaction to growing season weather. Development of resilient rootstocks, more efficient in terms of water and nutrient uptake and capable of dealing with climate and soil extremes (drought, high salinity) are primary goals fore future research. The use of these rootstocks will benefit a more sustainable use of the soil resources and the preservation and valorisation of the terroir.

DNA recovery from soils of diverse composition.

PubMed

Zhou, J; Bruns, M A; Tiedje, J M

1996-02-01

A simple, rapid method for bacterial lysis and direct extraction of DNA from soils with minimal shearing was developed to address the risk of chimera formation from small template DNA during subsequent PCR. The method was based on lysis with a high-salt extraction buffer (1.5 M NaCl) and extended heating (2 to 3 h) of the soil suspension in the presence of sodium dodecyl sulfate (SDS), hexadecyltrimethylammonium bromide, and proteinase K. The extraction method required 6 h and was tested on eight soils differing in organic carbon, clay content, and pH, including ones from which DNA extraction is difficult. The DNA fragment size in crude extracts from all soils was > 23 kb. Preliminary trials indicated that DNA recovery from two soils seeded with gram-negative bacteria was 92 to 99%. When the method was tested on all eight unseeded soils, microscopic examination of indigenous bacteria in soil pellets before and after extraction showed variable cell lysis efficiency (26 to 92%). Crude DNA yields from the eight soils ranged from 2.5 to 26.9 micrograms of DNA g-1, and these were positively correlated with the organic carbon content in the soil (r = 0.73). DNA yields from gram-positive bacteria from pure cultures were two to six times higher when the high-salt-SDS-heat method was combined with mortar-and-pestle grinding and freeze-thawing, and most DNA recovered was of high molecular weight. Four methods for purifying crude DNA were also evaluated for percent recovery, fragment size, speed, enzyme restriction, PCR amplification, and DNA-DNA hybridization. In general, all methods produced DNA pure enough for PCR amplification. Since soil type and microbial community characteristics will influence DNA recovery, this study provides guidance for choosing appropriate extraction and purification methods on the basis of experimental goals.

Debris flow study in Malaysia

NASA Astrophysics Data System (ADS)

Bahrin Jaafar, Kamal

2016-04-01

The phenomenon of debris flow occurs in Malaysia occasionally. The topography of Peningsular Malysia is characterized by the central mountain ranges running from south to north. Several parts of hilly areas with steep slopes, combined with high saturation of soil strata that deliberately increase the pore water pressure underneath the hill slope. As a tropical country Malaysia has very high intensity rainfall which is triggered the landslide. In the study area where the debris flow are bound to occur, there are a few factors that contribute to this phenomenon such as high rainfall intensity, very steep slope which an inclination more than 35 degree and sandy clay soil type which is easily change to liquidity soil. This paper will discuss the study of rainfall, mechanism, modeling and design of mitigation measure to avoid repeated failure in future in same area.

Enhancement of the Automated Quality Control Procedures for the International Soil Moisture Network

NASA Astrophysics Data System (ADS)

Heer, Elsa; Xaver, Angelika; Dorigo, Wouter; Messner, Romina

2017-04-01

In-situ soil moisture observations are still trusted to be the most reliable data to validate remotely sensed soil moisture products. Thus, the quality of in-situ soil moisture observations is of high importance. The International Soil Moisture Network (ISMN; http://ismn.geo.tuwien.ac.at/) provides in-situ soil moisture data from all around the world. The data is collected from individual networks and data providers, measured by different sensors in various depths. The data sets which are delivered in different units, time zones and data formats are then transformed into homogeneous data sets. An erroneous behavior of soil moisture data is very difficult to detect, due to annual and daily changes and most significantly the high influence of precipitation and snow melting processes. Only few of the network providers have a quality assessment for their data sets. Therefore, advanced quality control procedures have been developed for the ISMN (Dorigo et al. 2013). Three categories of quality checks were introduced: exceeding boundary values, geophysical consistency checks and a spectrum based approach. The spectrum based quality control algorithms aim to detect erroneous measurements which occur within plausible geophysical ranges, e.g. a sudden drop in soil moisture caused by a sensor malfunction. By defining several conditions which have to be met by the original soil moisture time series and their first and second derivative, such error types can be detected. Since the development of these sophisticated methods many more data providers shared their data with the ISMN and new types of erroneous measurements were identified. Thus, an enhancement of the automated quality control procedures became necessary. In the present work, we introduce enhancements of the existing quality control algorithms. Additionally, six completely new quality checks have been developed, e.g. detection of suspicious values before or after NAN-values, constant values and values that lie in a spectrum where a high majority of values before and after is flagged and therefore a sensor malfunction is certain. For the evaluation of the enhanced automated quality control system many test data sets were chosen, and manually validated to be compared to the existing quality control procedures and the new algorithms. Improvements will be shown that assure an appropriate assessment of the ISMN data sets, which are used for validations of soil moisture data retrieved by satellite data and are the foundation many other scientific publications.

Distribution and decline of human pathogenic bacteria in soil after application in irrigation water and the potential for soil-splash-mediated dispersal onto fresh produce.

PubMed

Monaghan, J M; Hutchison, M L

2012-05-01

To improve our understanding of the survival and splash-mediated transfer of zoonotic agents and faecal indicator bacteria introduced into soils used for crop cultivation via contaminated irrigation waters. Zoonotic agents and an Escherichia coli marker bacterium were inoculated into borehole water, which was applied to two different soil types in early-, mid- and late summer. Decline of the zoonotic agents was influenced by soil type. Marker bacteria applied to columns of two soil types in irrigation water did not concentrate at the surface of the soils. Decline of zoonotic agents at the surface was influenced by soil type and environmental conditions. Typically, declines were rapid and bacteria were not detectable after 5 weeks. Selective agar strips were used to determine that the impact of water drops 24-87 μl could splash marker bacteria from soil surfaces horizontal distances of at least 25 cm and heights of 20 cm. Soil splash created by rain-sized water droplets can transfer enteric bacteria from soil to ready-to-eat crops. Persistence of zoonotic agents was reduced at the hottest part of the growing season when irrigation is most likely. Soil splash can cause crop contamination. We report the penetration depths and seasonally influenced declines of bacteria applied in irrigation water into two soil types. © 2012 The Authors. Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

Combined Use of 16S Ribosomal DNA and 16S rRNA To Study the Bacterial Community of Polychlorinated Biphenyl-Polluted Soil

PubMed Central

Nogales, Balbina; Moore, Edward R. B.; Llobet-Brossa, Enrique; Rossello-Mora, Ramon; Amann, Rudolf; Timmis, Kenneth N.

2001-01-01

The bacterial diversity assessed from clone libraries prepared from rRNA (two libraries) and ribosomal DNA (rDNA) (one library) from polychlorinated biphenyl (PCB)-polluted soil has been analyzed. A good correspondence of the community composition found in the two types of library was observed. Nearly 29% of the cloned sequences in the rDNA library were identical to sequences in the rRNA libraries. More than 60% of the total cloned sequence types analyzed were grouped in phylogenetic groups (a clone group with sequence similarity higher than 97% [98% for Burkholderia and Pseudomonas-type clones]) represented in both types of libraries. Some of those phylogenetic groups, mostly represented by a single (or pair) of cloned sequence type(s), were observed in only one of the types of library. An important difference between the libraries was the lack of clones representative of the Actinobacteria in the rDNA library. The PCB-polluted soil exhibited a high bacterial diversity which included representatives of two novel lineages. The apparent abundance of bacteria affiliated to the beta-subclass of the Proteobacteria, and to the genus Burkholderia in particular, was confirmed by fluorescence in situ hybridization analysis. The possible influence on apparent diversity of low template concentrations was assessed by dilution of the RNA template prior to amplification by reverse transcription-PCR. Although differences in the composition of the two rRNA libraries obtained from high and low RNA concentrations were observed, the main components of the bacterial community were represented in both libraries, and therefore their detection was not compromised by the lower concentrations of template used in this study. PMID:11282645

Ectomycorrhizal Community Structure and Soil Characteristics of Mature Lodgepole Pine (Pinus Contorta) and Adjacent Stands of Old Growth Mixed Conifer in Yellowstone National Park, Wyoming USA

NASA Technical Reports Server (NTRS)

Douglas, Robert B.; Parker, V. Thomas; Cullings, Kenneth W.; Sun, Sidney (Technical Monitor)

2003-01-01

Forest development patterns following disturbance are known to influence the physical and chemical attributes of soils at different points in time. Changes in soil resources are thought to have a corresponding effect on ectomycorrhizal (ECM) community structure. We used molecular methods to compare below-ground ECM species richness, composition, and abundance between adjacent stands of homogenous lodgepole pine and old growth mixed conifer in Yellowstone National Park (YNP). In each stand-type we collected soil cores to both identify mycorrhizae and assess soil chemistry. Although no statistical difference was observed in the mean number of ECM root tips per core between stand types, the total number of species identified (85 versus 35) and the mean number of species per core (8.8 +/- 0.6 versus 2.5 +/- 0.3) were significantly higher in lodgepole pine. Differences between the actual and estimated species richness levels indicated that these forest types support a high number of ECM species and that undersampling was severe. Species compositions were widely disparate between stands where only four species were shared out of a total of 116. Soil analysis also revealed that mixed conifer was significantly lower in pH, but higher in organic matter, potassium, phosphorus, and ammonium when compared to lodgepole pine stands. Species richness per core was correlated with these chemical data, however, analysis of covariance indicated that stand type was the only statistically significant factor in the observed difference in species richness. Our data suggest that ECM fungal richness increases as homogenous lodgepole pine stands grow and mature, but declines after Engelmann spruce and subalpine fir colonize. Despite difficulties linking species composition with soil chemistry, there are a variety of physical and chemical factors that could be influencing ECM community structure. Future field experiments are necessary to test some of the mechanisms potentially operating within this system.

Fire intensity drives post-fire temporal pattern of soil carbon accumulation in Australian fire-prone forests.

PubMed

Sawyer, Robert; Bradstock, Ross; Bedward, Michael; Morrison, R John

2018-01-01

The impact of fire on global C cycles is considerable but complex. Nevertheless, studies on patterns of soil C accumulation following fires of differing intensity over time are lacking. Our study utilised 15 locations last burnt by prescribed fire (inferred low intensity) and 18 locations last burnt by wildfire (inferred high intensity), with time since fire (TSF) up to 43years, in a homogenous forest type in south eastern Australia. Following a stratified approach to mineral soil sampling, the soil % total C (% C Tot ) and % recalcitrant pyrogenic C (% RPC), were estimated. Generalised additive models indicated increases in % C Tot at TSF >30years in sites last burnt by wildfire. Estimates in sites last subjected to prescribed fire however, remained constant across the TSF chronosequence. There was no significant difference in % C Tot between the different fire types for the first 20years after fire. In the first 10years after wildfires, % RPC was elevated, declining to a minimum at ca. TSF 25years. After prescribed fires, % RPC was unaffected by TSF. Differences in response of % C Tot and % RPC to fire type may reflect the strength of stimulation of early successional processes and extent of charring. The divergent response to fire type in % C Tot was apparent at TSF longer than the landscape average fire return interval (i.e., 15 to 20years). Thus, any attempt to increase C sequestration in soils would require long-term exclusion of fire. Conversely, increased fire frequency is likely to have negligible impact on soil C stocks in these forests. Further investigation of the effects of fire frequency, fire intensity combinations and interaction of fire with other disturbances will enhance prediction of the likely impact of imposed or climatically induced changes to fire regimes on soil C. Copyright © 2017 Elsevier B.V. All rights reserved.

Soil texture drives responses of soil respiration to precipitation pulses in the sonoran desert: Implications for climate change

USGS Publications Warehouse

Cable, J.M.; Ogle, K.; Williams, D.G.; Weltzin, J.F.; Huxman, T. E.

2008-01-01

Climate change predictions for the desert southwestern U.S. are for shifts in precipitation patterns. The impacts of climate change may be significant, because desert soil processes are strongly controlled by precipitation inputs ('pulses') via their effect on soil water availability. This study examined the response of soil respiration-an important biological process that affects soil carbon (C) storage-to variation in pulses representative of climate change scenarios for the Sonoran Desert. Because deserts are mosaics of different plant cover types and soil textures-which create patchiness in soil respiration-we examined how these landscape characteristics interact to affect the response of soil respiration to pulses. Pulses were applied to experimental plots of bare and vegetated soil on contrasting soil textures typical of Sonoran Desert grasslands. The data were analyzed within a Bayesian framework to: (1) determine pulse size and antecedent moisture (soil moisture prior to the pulse) effects on soil respiration, (2) quantify soil texture (coarse vs. fine) and cover type (bare vs. vegetated) effects on the response of soil respiration and its components (plant vs. microbial) to pulses, and (3) explore the relationship between long-term variation in pulse regimes and seasonal soil respiration. Regarding objective (1), larger pulses resulted in higher respiration rates, particularly from vegetated fine-textured soil, and dry antecedent conditions amplified respiration responses to pulses (wet antecedent conditions dampened the pulse response). Regarding (2), autotrophic (plant) activity was a significant source (???60%) of respiration and was more sensitive to pulses on coarse- versus fine-textured soils. The sensitivity of heterotrophic (microbial) respiration to pulses was highly dependent on antecedent soil water. Regarding (3), seasonal soil respiration was predicted to increase with both growing season precipitation and mean pulse size (but only for pulses between 7 and 25 mm). Thus, the heterogeneity of the desert landscape and the timing or the number of medium-sized pulses is expected to significantly impact desert soil C loss with climate change. ?? 2008 Springer Science+Business Media, LLC.

Soil Water Balance and Vegetation Dynamics in two Contrasting Water-limited Mediterranean Ecosystems on Sardinia, Italy

NASA Astrophysics Data System (ADS)

Montaldo, N.; Albertson, J. D.; Corona, R.

2011-12-01

Water limited conditions strongly impacts soil and vegetation dynamics in Mediterranean regions, which are commonly heterogeneous ecosystems, characterized by inter-annual rainfall variability, topography variability and contrasting plant functional types (PFTs) competing for water use. Mediterranean regions are characterized by two main ecosystems, grassland and woodland, which for both natural and anthropogenic causes can grow in soils with different characteristics, highly impacting water resources. Water resources and forestal planning need a deep understanding of the dynamics between PFTs, soil and atmosphere and their impacts on water and CO2 distributions of these two main ecosystems. The first step is the monitoring of land surface fluxes, soil moisture, and vegetation dynamics of the two contrasting ecosystems. Moreover, due to the large percentage of soils with low depth (< 50 cm), and due to the quick hydrologic answer to atmospheric forcing in these soils, there is also the need to understand the impact of the soil depth in the vegetation dynamics, and make measurements in these types of soils. Sardinia island is a very interesting and representative region of Mediterranean ecosystems. It is low urbanized, and is not irrigated, except some plan areas close to the main cities where main agricultural activities are concentrated. The case study sites are within the Flumendosa river basin on Sardinia. Two sites, both in the Flumendosa river and with similar height a.s.l., are investigated. The distance between the sites is around 4 km but the first is a typically grass site located on an alluvial plan valley with a soil depth more than 2m, while the second site is a patchy mixture of Mediterranean vegetation types Oaks, creepers of the wild olive trees and C3 herbaceous species and the soil thickness varies from 15-40 cm, bounded from below by a rocky layer of basalt, partially fractured. In both sites land-surface fluxes and CO2 fluxes are estimated by eddy correlation technique based micrometeorological towers. Soil moisture profiles were also continuously estimated using water content reflectometers and gravimetric method, and periodically leaf area index PFTs are estimated during the Spring-Summer 2005. The following objectives are addressed:1) pointing out the dynamics of land surface fluxes, soil moisture, CO2 and vegetation cover for two contrasting water-limited ecosystems; 2) assess the impact of the soil depth and type on the CO2 and water balance dynamics. For reaching the objectives an ecohydrologic model is also successfully used and applied to the case studies. It couples a vegetation dynamic model, which computes the change in biomass over time for the PFTs, and a 3-component (bare soil, grass and woody vegetation) land surface model.

Incorporation of satellite remote sensing pan-sharpened imagery into digital soil prediction and mapping models to characterize soil property variability in small agricultural fields

NASA Astrophysics Data System (ADS)

Xu, Yiming; Smith, Scot E.; Grunwald, Sabine; Abd-Elrahman, Amr; Wani, Suhas P.

2017-01-01

Soil prediction models based on spectral indices from some multispectral images are too coarse to characterize spatial pattern of soil properties in small and heterogeneous agricultural lands. Image pan-sharpening has seldom been utilized in Digital Soil Mapping research before. This research aimed to analyze the effects of pan-sharpened (PAN) remote sensing spectral indices on soil prediction models in smallholder farm settings. This research fused the panchromatic band and multispectral (MS) bands of WorldView-2, GeoEye-1, and Landsat 8 images in a village in Southern India by Brovey, Gram-Schmidt and Intensity-Hue-Saturation methods. Random Forest was utilized to develop soil total nitrogen (TN) and soil exchangeable potassium (Kex) prediction models by incorporating multiple spectral indices from the PAN and MS images. Overall, our results showed that PAN remote sensing spectral indices have similar spectral characteristics with soil TN and Kex as MS remote sensing spectral indices. There is no soil prediction model incorporating the specific type of pan-sharpened spectral indices always had the strongest prediction capability of soil TN and Kex. The incorporation of pan-sharpened remote sensing spectral data not only increased the spatial resolution of the soil prediction maps, but also enhanced the prediction accuracy of soil prediction models. Small farms with limited footprint, fragmented ownership and diverse crop cycle should benefit greatly from the pan-sharpened high spatial resolution imagery for soil property mapping. Our results show that multiple high and medium resolution images can be used to map soil properties suggesting the possibility of an improvement in the maps' update frequency. Additionally, the results should benefit the large agricultural community through the reduction of routine soil sampling cost and improved prediction accuracy.

Sorption of atrazine and ametryn by carbonatic and non-carbonatic soils of varied origin.

PubMed

Kasozi, G N; Nkedi-Kizza, P; Li, Y; Zimmerman, A R

2012-10-01

Sorption of two s-triazines, atrazine and ametryn, by carbonatic soils, Histosols, Spodosols and Oxisols was examined. Linear isotherms were observed and sorption coefficients (K(d)) of both compounds were significantly lower (α = 0.05) onto carbonatic soils compared to non-carbonatic soils. Furthermore, among carbonatic soil types, the marl-carbonatic soils had the lowest sorption affinities. K(d) and organic carbon content were highly correlated, suggesting predominant influence of organic carbon in the sorption of the s-triazine, except in Oxisols and Spodosols where variations suggest other factors. Upon removal of organic matter (OM) using sodium hypochlorite and hydrogen peroxide, the K(d) values were reduced by ~90%, indicating minimal contribution of mineral surfaces. Thus OM compositional differences likely explain the large variation in s-triazine sorption within and between soil orders. This study highlights the need to consider OM composition in addition to quantity when determining pesticide applications rates, particularly for carbonatic soils. Copyright © 2012 Elsevier Ltd. All rights reserved.

Trampling resistance of tropical rainforest soils and vegetation in the wet tropics of north east Australia.

PubMed

Talbot, L M; Turton, S M; Graham, A W

2003-09-01

Controlled trampling was conducted to investigate the trampling resistance of contrasting high fertility basaltic and low fertility rhyolitic soils and their associated highland tropical rainforest vegetation in north east Australia's Wet Tropics. Although this approach has been taken in numerous studies of trampling in a variety of ecosystem types (temperate and subtropical forest, alpine shrubland, coral reef and seagrass beds), the experimental method does not appear to have been previously applied in a tropical rainforest context. Ground vegetation cover and soil penetration resistance demonstrated variable responses to trampling. Trampling, most noticeably after 200 and 500 passes reduced organic litter cover. Bulk density increased with trampling intensity, particularly on basalt soils as rhyolite soils appeared somewhat resistant to the impacts of trampling. The permeability of the basalt and rhyolite soils decreased markedly with increased trampling intensity, even after only 75 passes. These findings suggest physical and hydrological changes may occur rapidly in tropical rainforest soils following low levels of trampling, particularly on basalt soils.

Multitemporal analysis of estimated soil loss for the river Mourão watershed, Paraná - Brazil.

PubMed

Graça, C H; Passig, F H; Kelniar, A R; Piza, M A; Carvalho, K Q; Arantes, E J

2015-12-01

The multitemporal behavior of soil loss by surface water erosion in the hydrographic basin of the river Mourão in the center-western region of the Paraná state, Brazil, is analyzed. Forecast was based on the application of the Universal Soil Loss Equation (USLE) with the data integration and estimates within an Geography Information System (GIS) environment. Results had shown high mean annual rain erosivity (10,000 MJ.mm.ha(-1).h(-1).year(-1)), with great concentration in January and December. As a rule, soils have average erodibilities, exception of Dystroferric Red Latisol (low class) and Dystrophic Red Argisol (high class). Although the topographic factor was high (>20), rates lower than 1 were predominant. Main land uses comprise temporal crops and pasture throughout the years. The watershed showed a natural potential for low surface erosion. When related to usage types, yearly soil loss was also low (<50 ton.ha(-1).year(-1)), with more critical scores that reach rates higher than 150 ton.ha(-1).year(-1). Soil loss over the years did not provide great distinctions in distribution standards, although it becames rather intensified in some sectors, especially in the center-eastern and southwestern sections of the watershed.

Microbial composition in microcosms amended with natural and mineral fertilizers under different water regimes

NASA Astrophysics Data System (ADS)

Brad, Traian; Chiriac, Cecilia; Szekeres, Edina; Coman, Cristian; Rudi, Knut; Sandor, Mignon

2017-04-01

Twenty microcosm enclosures containing two types of soil (i.e. a rich Chernozemic and a poorer soil) were fertilized with mineral (NPK-complex) and organic (Gülle, manure and a green fertilizer) materials and placed under dry and wet water regimes. After 10, 20 and 30 days of the experiment, soil samples were analyzed for the structure and composition of microbial communities using next generation sequencing techniques (Illumina) and statistical analysis. The differences between bacteria communities in different soil types, and in different fertilization and hydric treatments were analyzed using quantitative phylogenetic distances and the ANOSIM test. The two types of soil especially selected for the structure of microbial communities, while moisture and the type of fertilizer appeared to have a smaller influence on microbial diversity in microcosms. The alpha-diversity indices (species richness, evenness and phylogenetic diversity) had higher values for the poorer soil compared to the rich Chernozemic soil. For both soil types, the highest bacteria diversity values were obtained after fertilization with manure. The microbial communities in the analyzed soils were complex and dominated by sequences belonging to Actinobacteria, Proteobacteria, Acidobacteria and Firmicutes.

Soil quality succession of mudflat in coastal area of China under different types of man-made land uses

NASA Astrophysics Data System (ADS)

Lu, Haiying; Shao, Hongbo; Xu, Zhaolong; Peng, Cheng

2017-04-01

Marshy reclamation in coastal area is becoming an important strategy for food safety security and economic development in China. After the reclamation of mudflat, the nutrient concentration in soil is one of the dominated factors restricting the development of marshy agriculture. However, little information is available for soil nutrient dynamics and its driving mechanisms under different types of man-made land uses. In this review, we summarized the soil nutrient dynamics under different types of man-made land uses (bare mudflat soil, rice-wheat rotation soil, aquaculture soil, and forest soil), including the change of physical and chemical features of the reclaimed soil; ii) the dynamics of soil organic matters and its driving mechanism in marshy land; iii) the migration of N, P, and K in marshy soil; and iv) the oriented cultivation and improvement for soil nutrient in marshy soil. This study contributes not only to understanding the soil nutrient cycling in marshy land, but also to providing valuable information for the sustainable development of salt-soil agriculture in marshy land along seaside cities of China.

[Prediction of regional soil quality based on mutual information theory integrated with decision tree algorithm].

PubMed

Lin, Fen-Fang; Wang, Ke; Yang, Ning; Yan, Shi-Guang; Zheng, Xin-Yu

2012-02-01

In this paper, some main factors such as soil type, land use pattern, lithology type, topography, road, and industry type that affect soil quality were used to precisely obtain the spatial distribution characteristics of regional soil quality, mutual information theory was adopted to select the main environmental factors, and decision tree algorithm See 5.0 was applied to predict the grade of regional soil quality. The main factors affecting regional soil quality were soil type, land use, lithology type, distance to town, distance to water area, altitude, distance to road, and distance to industrial land. The prediction accuracy of the decision tree model with the variables selected by mutual information was obviously higher than that of the model with all variables, and, for the former model, whether of decision tree or of decision rule, its prediction accuracy was all higher than 80%. Based on the continuous and categorical data, the method of mutual information theory integrated with decision tree could not only reduce the number of input parameters for decision tree algorithm, but also predict and assess regional soil quality effectively.

The greenhouse gas balance of a drained fen peatland is mainly controlled by land-use rather than soil organic carbon content

NASA Astrophysics Data System (ADS)

Eickenscheidt, T.; Heinichen, J.; Drösler, M.

2015-04-01

Drained organic soils are considered as hotspots for greenhouse gas (GHG) emissions. Particularly arable lands and intensively used grasslands have been regarded as the main producers of carbon dioxide (CO2) and nitrous oxide (N2O). However, GHG balances of former peatlands and associated organic soils not considered as peatland according to the definition of the Intergovernmental Panel on Climate Change (IPCC) have not been investigated so far. Therefore, our study addressed the question to what extent the soil organic carbon (SOC) content affects the GHG release of drained organic soils under two different land-use types (arable land and intensively used grassland). Both land-use types were established on a mollic Gleysol (named Cmedium) as well as on a sapric Histosol (named Chigh). The two soil types significantly differed in their SOC contents in the topsoil (Cmedium: 9.4-10.9% SOC; Chigh: 16.1-17.2% SOC). We determined GHG fluxes (CO2, N2O and methane (CH4)) over a period of 2 years. The daily and annual net ecosystem exchange (NEE) of CO2 was determined with the closed dynamic chamber technique and by modeling the ecosystem respiration (RECO) and the gross primary production (GPP). N2O and CH4 were determined by the close chamber technique. Estimated NEE of CO2 significantly differed between the two land-use types with lower NEE values (-6 to 1707 g CO2-C m-2 yr-1) at the arable sites and higher values (1354 to 1823 g CO2-C m-2 yr-1) at the grassland sites. No effect on NEE was found regarding the SOC content. Significantly higher annual N2O exchange rates were observed at the arable sites (0.23-0.86 g N m-2 yr-1) compared to the grassland sites (0.12-0.31 g N m-2 yr-1). Furthermore, N2O fluxes from the Chigh sites significantly exceeded those of the Cmedium sites. CH4 fluxes were found to be close to zero at all plots. Estimated global warming potential, calculated for a time horizon of 100 years (GWP100) revealed a very high release of GHGs from all plots ranging from 1837 to 7095 g CO2 eq. m-2 yr-1. Calculated global warming potential (GWP) values did not differ between soil types and partly exceeded the IPCC default emission factors of the Tier 1 approach by far. However, despite being subject to high uncertainties, the results clearly highlight the importance to adjust the IPCC guidelines for organic soils not falling under the definition, to avoid a significant underestimation of GHG emissions in the corresponding sectors of the national climate reporting. Furthermore, the present results revealed that mainly the land-use including the management and not the SOC content is responsible for the height of GHG exchange from intensive farming on drained organic soils.

Estimating mercury emissions resulting from wildfire in forests of the Western United States

USGS Publications Warehouse

Webster, Jackson; Kane, Tyler J.; Obrist, Daniel; Ryan, Joseph N.; Aiken, George R.

2016-01-01

Understanding the emissions of mercury (Hg) from wildfires is important for quantifying the global atmospheric Hg sources. Emissions of Hg from soils resulting from wildfires in the Western United States was estimated for the 2000 to 2013 period, and the potential emission of Hg from forest soils was assessed as a function of forest type and soil-heating. Wildfire released an annual average of 3100 ± 1900 kg-Hg y− 1 for the years spanning 2000–2013 in the 11 states within the study area. This estimate is nearly 5-fold lower than previous estimates for the study region. Lower emission estimates are attributed to an inclusion of fire severity within burn perimeters. Within reported wildfire perimeters, the average distribution of low, moderate, and high severity burns was 52, 29, and 19% of the total area, respectively. Review of literature data suggests that that low severity burning does not result in soil heating, moderate severity fire results in shallow soil heating, and high severity fire results in relatively deep soil heating (< 5 cm). Using this approach, emission factors for high severity burns ranged from 58 to 640 μg-Hg kg-fuel− 1. In contrast, low severity burns have emission factors that are estimated to be only 18–34 μg-Hg kg-fuel− 1. In this estimate, wildfire is predicted to release 1–30 g Hg ha− 1 from Western United States forest soils while above ground fuels are projected to contribute an additional 0.9 to 7.8 g Hg ha− 1. Land cover types with low biomass (desert scrub) are projected to release less than 1 g Hg ha− 1. Following soil sources, fuel source contributions to total Hg emissions generally followed the order of duff > wood > foliage > litter > branches.

Deficiencies and toxicities of trace elements and micronutrients in tropical soils: Limitations of knowledge and future research needs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Davies, B.E.

1997-01-01

This article reviews present knowledge concerning deficiencies and toxicities of trace elements and micronutrients in tropical soils. The myth that all tropical soils are highly leached and nutrient-poor is challenged. Continuing use of the term laterite by ecologists and geologists is criticized and adoption of plinthite is urged. The trace element content of plinthite and its possible influence on micronutrient availability are described. Micronutrient limitations of tropical agriculture are related to soil type and formation, and the special problem of aluminum toxicity in acid soils is discussed in both agricultural and ecological contexts. Studies of micronutrient cycling in tropical forestsmore » or savannas are needed to supplement the emerging picture of the complexities of major element cycles in these ecosystems.« less

Phosphorus Fertilizer Rate, Soil P Availability, and Long-Term Growth Response in a Loblolly Pine Plantation on a Weathered Ultisol

Treesearch

D. Andrew Scott; Christine M. Bliss

2012-01-01

Phosphorus is widely deficient throughout the southern pine region of the United States. Growth responses to P fertilization are generally long-lasting in a wide range of soil types, but little is known about fertilization rates and long-term P cycling and availability. In 1982, exceptionally high P fertilization rates (0, 81, 162, and 324 kg P ha-1...

Changes in Carbon Chemistry and Stability Along Deep Tropical Soil Profiles at the Luquillo Critical Zone Observatory

NASA Astrophysics Data System (ADS)

Stone, M.; Hockaday, W. C.; Plante, A. F.

2014-12-01

Tropical forests are the largest terrestrial carbon (C) sink, and tropical forest soils contribute disproportionately to the poorly-characterized deep soil C pool. The goal of this study was to evaluate how carbon chemistry and stability change with depth in tropical forest soils formed on two contrasting parent materials. We used soils from pits excavated to 140 cm depth that were stratified across two soil types (Oxisols and Inceptisols) at the Luquillo Critical Zone Observatory in northeast Puerto Rico. We used 13C nuclear magnetic resonance (NMR) spectroscopy to characterize soil C chemistry and differential scanning calorimetry (DSC) coupled with evolved gas analysis (CO2-EGA) to evaluate the thermal stability of soil C during ramped combustion. Thirty-four samples with an initial C concentration ≥1% were chosen from discrete depth intervals (0, 30, 60, 90 & 140 cm) for 13C NMR analysis, while DSC was performed on 122 samples that included the NMR sample set and additional samples at 20, 50, 80 and 110 cm depth. Preliminary 13C NMR results indicate higher alkyl : O-alkyl ratios and an enrichment of aliphatic and proteinaceous C with depth, compared with greater aromatic and carbohydrate signals in surface soils. The energy density of soil C (J mg-1 C) also declined significantly with depth. In Oxisols, most CO2 evolution from combustion occurred around 300ºC, while most CO2 evolution occurred at higher temperatures (400-500ºC) in Inceptisols. Our findings suggest soil C is derived primarily of plant biomolecules in surface soils and becomes increasingly microbial with depth. Soil matrix-mediated differences in C transport and preservation may result in differences in C chemistry between the two soil types and a more thermally labile C pool in the Oxisols. We suggest that energy-poor substrates, combined with potentially stronger organo-mineral interactions in subsoils, may explain the long-term stability of deep C in highly weathered tropical soils.

Diversity and Activity of Denitrifiers of Chilean Arid Soil Ecosystems

PubMed Central

Orlando, Julieta; Carú, Margarita; Pommerenke, Bianca; Braker, Gesche

2012-01-01

The Chilean sclerophyllous matorral is a Mediterranean semiarid ecosystem affected by erosion, with low soil fertility, and limited by nitrogen. However, limitation of resources is even more severe for desert soils such as from the Atacama Desert, one of the most extreme arid deserts on Earth. Topsoil organic matter, nitrogen and moisture content were significantly higher in the semiarid soil compared to the desert soil. Although the most significant loss of biologically preferred nitrogen from terrestrial ecosystems occurs via denitrification, virtually nothing is known on the activity and composition of denitrifier communities thriving in arid soils. In this study we explored denitrifier communities from two soils with profoundly distinct edaphic factors. While denitrification activity in the desert soil was below detection limit, the semiarid soil sustained denitrification activity. To elucidate the genetic potential of the soils to sustain denitrification processes we performed community analysis of denitrifiers based on nitrite reductase (nirK and nirS) genes as functional marker genes for this physiological group. Presence of nirK-type denitrifiers in both soils was demonstrated but failure to amplify nirS from the desert soil suggests very low abundance of nirS-type denitrifiers shedding light on the lack of denitrification activity. Phylogenetic analysis showed a very low diversity of nirK with only three distinct genotypes in the desert soil which conditions presumably exert a high selection pressure. While nirK diversity was also limited to only few, albeit distinct genotypes, the semiarid matorral soil showed a surprisingly broad genetic variability of the nirS gene. The Chilean matorral is a shrub land plant community which form vegetational patches stabilizing the soil and increasing its nitrogen and carbon content. These islands of fertility may sustain the development and activity of the overall microbial community and of denitrifiers in particular. PMID:22493591

Effects of different agricultural managements in soil microbial community structure in a semi-arid Mediterranean region.

NASA Astrophysics Data System (ADS)

García-Orenes, Fuensanta; Morugan, Alicia; Mataix-Solera, Jorge; Scow, Kate

2013-04-01

Agriculture has been practiced in semi-arid Mediterranean regions for 10.000 years and in many cases these practices have been unsuitable causing land degradation for millennium and an important loss of soil quality. The land management can provide solutions to find the best agricultural practices in order to maintain the soil quality and get a sustainable agriculture model. Microbiological properties are the most sensitive and rapid indicators of soil perturbations and land use managements. The study of microbial community and diversity has an important interest as indicators of changes in soil quality. The main objective of this work was to asses the effect of different agricultural management practices in soil microbial community (evaluated as abundance of phospholipid fatty acids, PLFA). Four different treatments were selected, based on the most commonly practices applied by farmers in the study area, "El Teularet Experimental Station", located at the Enguera Range in the southern part of the Valencia province (eastern Spain). These treatments were: a) ploughing, b) herbicides c) mulch, using the types applied by organic farmers to develop a sustainable agriculture, such as oat straw and d) control that was established as plot where the treatment was abandonment after farming. An adjacent area with the same type of soil, but with natural vegetation was used as a standard or reference high quality soil. Soil samples were taken to evaluate the changes in microbial soil structure, analysing the abundance of PLFA. The results showed a major content of total PLFA in soils treated with oats straw, being these results similar to the content of PLFA in the soil with natural vegetation, also these soils were similar in the distribution of abundance of different PLFA studied. However, the herbicide and tillage treatments showed great differences regarding the soil used as reference (soil under natural vegetation).

Global distribution of soil organic carbon - Part 1: Masses and frequency distributions of SOC stocks for the tropics, permafrost regions, wetlands, and the world

NASA Astrophysics Data System (ADS)

Köchy, M.; Hiederer, R.; Freibauer, A.

2015-04-01

The global soil organic carbon (SOC) mass is relevant for the carbon cycle budget and thus atmospheric carbon concentrations. We review current estimates of SOC stocks and mass (stock × area) in wetlands, permafrost and tropical regions and the world in the upper 1 m of soil. The Harmonized World Soil Database (HWSD) v.1.2 provides one of the most recent and coherent global data sets of SOC, giving a total mass of 2476 Pg when using the original values for bulk density. Adjusting the HWSD's bulk density (BD) of soil high in organic carbon results in a mass of 1230 Pg, and additionally setting the BD of Histosols to 0.1 g cm-3 (typical of peat soils), results in a mass of 1062 Pg. The uncertainty in BD of Histosols alone introduces a range of -56 to +180 Pg C into the estimate of global SOC mass in the top 1 m, larger than estimates of global soil respiration. We report the spatial distribution of SOC stocks per 0.5 arcminutes; the areal masses of SOC; and the quantiles of SOC stocks by continents, wetland types, and permafrost types. Depending on the definition of "wetland", wetland soils contain between 82 and 158 Pg SOC. With more detailed estimates for permafrost from the Northern Circumpolar Soil Carbon Database (496 Pg SOC) and tropical peatland carbon incorporated, global soils contain 1325 Pg SOC in the upper 1 m, including 421 Pg in tropical soils, whereof 40 Pg occurs in tropical wetlands. Global SOC amounts to just under 3000 Pg when estimates for deeper soil layers are included. Variability in estimates is due to variation in definitions of soil units, differences in soil property databases, scarcity of information about soil carbon at depths > 1 m in peatlands, and variation in definitions of "peatland".

Dynamic Effects of Biochar on the Bacterial Community Structure in Soil Contaminated with Polycyclic Aromatic Hydrocarbons.

PubMed

Song, Yang; Bian, Yongrong; Wang, Fang; Xu, Min; Ni, Ni; Yang, Xinglun; Gu, Chenggang; Jiang, Xin

2017-08-16

Amending soil with biochar is an effective soil remediation strategy for organic contaminants. This study investigated the dynamic effects of wheat straw biochar on the bacterial community structure during remediation by high-throughput sequencing. The wheat straw biochar amended into the soil significantly reduced the bioavailability and toxicity of polycyclic aromatic hydrocarbons (PAHs). Biochar amendment helped to maintain the bacterial diversity in the PAH-contaminated soil. The relationship between the immobilization of PAHs and the soil bacterial diversity fit a quadratic model. Before week 12 of the incubation, the incubation time was the main factor contributing to the changes in the soil bacterial community structure. However, biochar greatly affected the bacterial community structure after 12 weeks of amendment, and the effects were dependent upon the biochar type. Amendment with biochar mainly facilitated the growth of rare bacterial genera (relative abundance of 0.01-1%) in the studied soil. Therefore, the application of wheat straw biochar into PAH-contaminated soil can reduce the environmental risks of PAHs and benefit the soil microbial ecology.

Vegetation Response to Rainfall and Soil Moisture Variability in Botswana

DTIC Science & Technology

1991-01-01

Effects of Varying Soil Type on the NDVI /Rainfall and NDVI /Soil Moisture...examine the effects of different soil types on the vegetation growth/rainfall relationship. The goals are to determine whether differences in the water-use...34first step" in removing the soil effect (Huete et al., 1985). Indeed, no large-scale soil corrections have been attempted as yet on NDVI data.

The Role of Soil Organic Matter, Nutrients, and Microbial Community Structure on the Performance of Microbial Fuel Cells

NASA Astrophysics Data System (ADS)

Rooney-Varga, J. N.; Dunaj, S. J.; Vallino, J. J.; Hines, M. E.; Gay, M.; Kobyljanec, C.

2011-12-01

Microbial fuel cells (MFCs) offer the potential for generating electricity, mitigating greenhouse gas emissions, and bioremediating pollutants through utilization of a plentiful, natural, and renewable resource: soil organic carbon. In the current study, we analyzed microbial community structure, MFC performance, and soil characteristics in different microhabitats (bulk soil, anode, and cathode) within MFCs constructed from agricultural or forest soils in order to determine how soil type and microbial dynamics influence MFC performance. MFCs were constructed with soils from agricultural and hardwood forest sites at Harvard Forest (Petersham, MA). The bulk soil characteristics were analyzed, including polyphenols, short chain fatty acids, total organic C and N, abiotic macronutrients, N and P mineralization rates, CO2 respiration rates, and MFC power output. Microbial community structure of the anodes, cathodes, and bulk soils was determined with molecular fingerprinting methods, which included terminal restriction length polymorphism (T-RFLP) analysis and 16S rRNA gene sequencing analysis. Our results indicated that MFCs constructed from agricultural soil had power output about 17 times that of forest soil-based MFCs and respiration rates about 10 times higher than forest soil MFCs. Agricultural soil MFCs had lower C:N ratios, polyphenol content, and acetate concentrations than forest soil MFCs, suggesting that active agricultural MFC microbial communities were supported by higher quality organic carbon. Microbial community profile data indicate that the microbial communities at the anode of the high power MFCs were less diverse than in low power MFCs and were dominated by Deltaproteobacteria, Geobacter, and, to a lesser extent, Clostridia, while low-power MFC anode communities were dominated by Clostridia. These data suggest that the presence of organic carbon substrate (acetate) was not the major limiting factor in selecting for highly electrogenic microbial communities, while the quality of available organic matter may have played a significant role in supporting high performing microbial communities.

Soil bacterial community responses to revegetation of moving sand dune in semi-arid grassland.

PubMed

Cao, Chengyou; Zhang, Ying; Cui, Zhenbo; Feng, Shuwei; Wang, Tingting; Ren, Qing

2017-08-01

Grasslands in semi-arid Northern China are widely desertified, thus inducing the formation of a large area of moving sand lands. Revegetation of the sandy land is commonly adopted to restore degraded grasslands. The structure of the soil microbial community might dramatically change during degradation and recovery because microorganisms are one of the major drivers of ecological process through their interactions with plants and soil. Assuming that soil properties are the key determinants of the structure of soil bacterial community within the same soil type, whether the vegetation type causes the significant difference in the structure of soil bacterial community during revegetation and restoration of the degraded grasslands remains poorly understood. Our study aimed to (1) investigate the response of soil bacterial communities to the changes during vegetation degradation and recovery and (2) evaluate whether the soil bacterial communities under plantations return to their native state. We detected the shifts in diversities and compositions of the soil bacterial communities and the relative abundance of dominant bacterial taxa by using the high-throughput Illumina MiSeq sequencing technique in an area covered by 32-year-old Caragana microphylla, Artemisia halodendron, Hedysarum fruticosum, Pinus sylvestris var. mongolica, Populus simonii, and Salix gordejevii sand-fixing plantations and in the native community (NC) dominated by elm, and moving sandy dune (MS). We found that the obtained operational taxonomic units by 16S rRNA gene sequencing and diversity index in MS were all significantly lower than those in NC, and the number and composition of dominant genera were significantly different between NC and MS. Interestingly, the compositions of bacterial communities and the dominant genera in different sand-fixation plantations (C. microphylla, A. halodendron, H. fruticosum, P. sylvestris var. mongolica, P. simonii, and S. gordejevii) were all similar to those of the native soil of NC, suggesting that the plantation type and soil properties exhibit a minimal effect on the compositions of soil microbial communities within a continuous landscape. These results revealed that the structure of the soil bacterial community of degraded sandy grassland (even degenerated into a mobile sand dunes) in semi-arid region can be reversibly restored by planting indigenous shrub or semi-shrub plantation on human time scales.

A single-degree-of-freedom model for non-linear soil amplification

USGS Publications Warehouse

Erdik, Mustafa Ozder

1979-01-01

For proper understanding of soil behavior during earthquakes and assessment of a realistic surface motion, studies of the large-strain dynamic response of non-linear hysteretic soil systems are indispensable. Most of the presently available studies are based on the assumption that the response of a soil deposit is mainly due to the upward propagation of horizontally polarized shear waves from the underlying bedrock. Equivalent-linear procedures, currently in common use in non-linear soil response analysis, provide a simple approach and have been favorably compared with the actual recorded motions in some particular cases. Strain compatibility in these equivalent-linear approaches is maintained by selecting values of shear moduli and damping ratios in accordance with the average soil strains, in an iterative manner. Truly non-linear constitutive models with complete strain compatibility have also been employed. The equivalent-linear approaches often raise some doubt as to the reliability of their results concerning the system response in high frequency regions. In these frequency regions the equivalent-linear methods may underestimate the surface motion by as much as a factor of two or more. Although studies are complete in their methods of analysis, they inevitably provide applications pertaining only to a few specific soil systems, and do not lead to general conclusions about soil behavior. This report attempts to provide a general picture of the soil response through the use of a single-degree-of-freedom non-linear-hysteretic model. Although the investigation is based on a specific type of nonlinearity and a set of dynamic soil properties, the method described does not limit itself to these assumptions and is equally applicable to other types of nonlinearity and soil parameters.

Soil Microbe Active Community Composition and Capability of Responding to Litter Addition after 12 Years of No Inputs

PubMed Central

Brewer, Elizabeth; Yarwood, Rockie; Lajtha, Kate; Myrold, David

2013-01-01

One explanation given for the high microbial diversity found in soils is that they contain a large inactive biomass that is able to persist in soils for long periods of time. This persistent microbial fraction may help to buffer the functionality of the soil community during times of low nutrients by providing a reservoir of specialized functions that can be reactivated when conditions improve. A study was designed to test the hypothesis: in soils lacking fresh root or detrital inputs, microbial community composition may persist relatively unchanged. Upon addition of new inputs, this community will be stimulated to grow and break down litter similarly to control soils. Soils from two of the Detrital Input and Removal Treatments (DIRT) at the H. J. Andrews Experimental Forest, the no-input and control treatment plots, were used in a microcosm experiment where Douglas-fir needles were added to soils. After 3 and 151 days of incubation, soil microbial DNA and RNA was extracted and characterized using quantitative PCR (qPCR) and 454 pyrosequencing. The abundance of 16S and 28S gene copies and RNA copies did not vary with soil type or amendment; however, treatment differences were observed in the abundance of archaeal ammonia-oxidizing amoA gene abundance. Analysis of ∼110,000 bacterial sequences showed a significant change in the active (RNA-based) community between day 3 and day 151, but microbial composition was similar between soil types. These results show that even after 12 years of plant litter exclusion, the legacy of community composition was well buffered against a dramatic disturbance. PMID:23263952

Selective determination of heavy metals (Cd, Pb, Cr) speciation forms from hortic anthrosols

NASA Astrophysics Data System (ADS)

Bulgariu, Dumitru; Bulgariu, Laura; Filipov, Feodor; Astefanei, Dan; Stoleru, Vasile

2010-05-01

In soils from glass houses, the speciation and inter-phases distribution processes of heavy metals have a particular dynamic, different in comparison with those from non-protected soils. The predominant distribution forms of heavy metals in such soils types are: complexes with low mass organic molecules, organic-mineral complexes, complexes with inorganic ligands (hydroxide-complexes, carbonate-complexes, sulphate-complexes, etc.) and basic salts. All of these have high stabilities in conditions of soils from glass houses, and in consequence, the separation and determination of speciation forms (which is directly connected with biodisponibility of heavy metals) by usual methods id very difficult and has a high uncertain degree. In this study is presented an original method for the selective separation and differentiation of speciation forms of heavy metals from glass houses soils, which is based by the combination of solid-liquid sequential extraction (SPE) with the extraction in aqueous polymer-inorganic salt two-phase systems (ABS). The soil samples used for this study have been sampled from three different locations (glass houses from Iasi, Barlad and Bacau - Romania) where the vegetables cultivation have been performed by three different technologies. In this way was estimated the applicability and the analytical limits of method proposed by as, in function of the chemical-mineralogical and physical-chemical characteristics of soils. As heavy metals have been studied cadmium, lead and chromium, all being known for their high toxicity. The procedure used for the selective separation and differentiation of speciation forms of heavy metals from glass houses soils has two main steps: (i) non-destructive separation of chemical-mineralogical associations and aggregates from soils samples - for this the separation method with heavy liquids (bromophorme) and isodynamic magnetic method have been used; (ii) sequential extraction of heavy metals from soil fractions separated in the first step, by using combined SPE-ABS procedure. For the preparation of combined extraction systems was used polyethylene glycol (with different molecular mass: 2000, 4000 and 8000). As phase-forming inorganic salts and as selective extracting agents we have used different usual inorganic reagents. The type and concentration of phase-forming salts have been selected in function of, both nature of extracted heavy metals and chemical-mineralogical characteristics of soil samples. The experimental parameters investigated in this study are: molecular mass of polyethylene glycol and the concentration of polymeric solutions, nature and concentration of phase-forming salts, nature and concentration of extracting agents, pH in extraction system phase, type of extracted heavy metals, type of speciation forms of heavy metals and their concentrations. All these factors can influence significantly the efficiency and the selectivity of separation process. The experimental results have indicate that the combined SPE-ABS extraction systems have better separation efficiency, in comparison with traditional SPE systems and ca realized a accurate discrimination between speciation forms of heavy metals from soils. Under these conditions, the estimation of inter-phases distribution and biodisponibility of heavy metals has a high precision. On the other hand, when the combined SPE-ABS systems are used, the concomitant extraction of the elements from the same geochemical association with studied heavy metals (inevitable phenomena in case of separation by SPE procedures) is significant diminished. This increases the separation selectivity and facilitated the more accurate determination of speciation forms concentration. By adequate selection of extraction conditions can be realized the selective separation of organic-mineral complexes, which will permit to perform detailed studies about the structure and chemical composition of these. Acknowledgments The authors would like to acknowledge the financial support from Romanian Ministry of Education and Research (Project PNCDI 2-D5 no. 51045/07 and project PNCDI 2 - D5 no. 52-141 / 2008).

Sorption and degradation of pharmaceuticals and personal care products (PPCPs) in soils.

PubMed

Yu, Yong; Liu, Yin; Wu, Laosheng

2013-06-01

Pharmaceuticals and personal care products (PPCPs) are one class of the most urgent emerging contaminants, which have drawn much public and scientific concern due to widespread contamination in aquatic environment. Most studies on the environmental fate and behavior of PPCPs have focused on nonsteroidal anti-inflammatory drugs. Some other compounds with high concentrations were less mentioned. In this study, sorption and degradation of five selected PPCPs, including bisphenol A (BPA), carbamazepine (CBZ), gemfibrozil (GFB), octylphenol (OP), and triclosan (TCS) have been investigated using three different soils. Sorption isotherms of all tested PPCPs in soils were well described by Freundlich equation. TCS and OP showed moderate to strong sorption, while the sorption of GFB and CBZ in soils was negligible. Degradation of PPCPs in three soils was generally fitted first-order exponential decay model, with half-lives (t 1/2) varying from 9.8 to 39.1 days. Sterilization could prolong the t 1/2 of PPCPs in soil, indicating that microbial activity played an important role in the degradation of these chemicals in soils. Degradation of PPCPs in soils was also influenced by the soil organic carbon (f oc) contents. Results from our data show that sorption to the soils varied among the different PPCPs, and their sorption affinity on soil followed the order of TCS > OP > BPA > GFB > CBZ. The degradation of the selected PPCPs in soil was influenced by the microbial activity and soil type. The poor sorption and relative persistence of CBZ suggest that it may pose a high leaching risk for groundwater contamination when recycled for irrigation.

On the soil moisture estimate at basin scale in Mediterranean basins with the ASAR sensor: the Mulargia basin case study

NASA Astrophysics Data System (ADS)

Fois, Laura; Montaldo, Nicola

2017-04-01

Soil moisture plays a key role in water and energy exchanges between soil, vegetation and atmosphere. For water resources planning and managementthesoil moistureneeds to be accurately and spatially monitored, specially where the risk of desertification is high, such as Mediterranean basins. In this sense active remote sensors are very attractive for soil moisture monitoring. But Mediterranean basinsaretypicallycharacterized by strong topography and high spatial variability of physiographic properties, and only high spatial resolution sensorsare potentially able to monitor the strong soil moisture spatial variability.In this regard the Envisat ASAR (Advanced Synthetic Aperture Radar) sensor offers the attractive opportunity ofsoil moisture mapping at fine spatial and temporal resolutions(up to 30 m, every 30 days). We test the ASAR sensor for soil moisture estimate in an interesting Sardinian case study, the Mulargia basin withan area of about 70 sq.km. The position of the Sardinia island in the center of the western Mediterranean Sea basin, its low urbanization and human activity make Sardinia a perfect reference laboratory for Mediterranean hydrologic studies. The Mulargia basin is a typical Mediterranean basinin water-limited conditions, and is an experimental basin from 2003. For soil moisture mapping23 satellite ASAR imagery at single and dual polarization were acquired for the 2003-2004period.Satellite observationsmay bevalidated through spatially distributed soil moisture ground-truth data, collected over the whole basin using the TDR technique and the gravimetric method, in days with available radar images. The results show that ASAR sensor observations can be successfully used for soil moisture mapping at different seasons, both wet and dry, but an accurate calibration with field data is necessary. We detect a strong relationship between the soil moisture spatial variability and the physiographic properties of the basin, such as soil water storage capacity, deep and texture of soils, type and density of vegetation, and topographic parameters. Finally we demonstrate that the high resolution ASAR imagery are an attractive tool for estimating surface soil moisture at basin scale, offering a unique opportunity for monitoring the soil moisture spatial variability in typical Mediterranean basins.

Key parameters in testing biodegradation of bio-based materials in soil.

PubMed

Briassoulis, D; Mistriotis, A

2018-09-01

Biodegradation of plastics in soil is currently tested by international standard testing methods (e.g. ISO 17556-12 or ASTM D5988-12). Although these testing methods have been developed for plastics, it has been shown in project KBBPPS that they can be extended also to lubricants with small modifications. Reproducibility is a critical issue regarding biodegradation tests in the laboratory. Among the main testing variables are the soil types and nutrients available (mainly nitrogen). For this reason, the effect of the soil type on the biodegradation rates of various bio-based materials (cellulose and lubricants) was tested for five different natural soil types (loam, loamy sand, clay, clay-loam, and silt-loam organic). It was shown that use of samples containing 1 g of C in a substrate of 300 g of soil with the addition of 0.1 g of N as nutrient strongly improves the reproducibility of the test making the results practically independent of the soil type with the exception of the organic soil. The sandy soil was found to need addition of higher amount of nutrients to exhibit similar biodegradation rates as those achieved with the other soil types. Therefore, natural soils can be used for Standard biodegradation tests of bio-based materials yielding reproducible results with the addition of appropriate nutrients. Copyright © 2018 Elsevier Ltd. All rights reserved.

[Variation of soil organic carbon under different vegetation types in Karst Mountain areas of Guizhou Province, southwest China].

PubMed

Liao, Hong-kai; Long, Jian

2011-09-01

This paper studied the variation characteristics of soil organic carbon (SOC) and different particle sizes soil particulate organic carbon (POC) in normal soil and in micro-habitats under different vegetation types in typical Karst mountain areas of southwest Guizhou. Under different vegetation types, the SOC content in normal soil and in micro-habitats was all in the order of bare land < grass < shrub < forest, with the variation range being 7.18-43.42 g x kg(-1) in normal soil and being 6.62-46.47 g x kg(-1) and 9.01-52.07 g x kg(-1) in earth surface and stone pit, respectively. The POC/MOC (mineral-associated organic carbon) ratio under different vegetation types was in the order of bare land < grass < forest < shrub. Under the same vegetation types, the POC/MOC in stone pit was the highest, as compared to that in normal soil and in earth surface. In the process of bare land-grass-shrub-forest, the contents of different particle sizes soil POC increased, while the SOC mainly existed in the forms of sand- and silt organic carbon, indicating that in Karst region, soil carbon sequestration and SOC stability were weak, soil was easily subjected to outside interference and led to organic carbon running off, and thus, soil quality had the risk of decline or degradation.

Quantitative analyses of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in fields with different soil types.

PubMed

Morimoto, Sho; Hayatsu, Masahito; Takada Hoshino, Yuko; Nagaoka, Kazunari; Yamazaki, Masatsugu; Karasawa, Toshihiko; Takenaka, Makoto; Akiyama, Hiroko

2011-01-01

Soil type is one of the key factors affecting soil microbial communities. With regard to ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB), however, it has not been determined how soil type affects their community size and soil nitrification activity. Here we quantitatively analyzed the ammonia monooxygenase genes (amoA) of these ammonia oxidizers in fields with three different soil types (Low-humic Andosol [LHA], Gray Lowland Soil [GLS], and Yellow Soil [YS]) under common cropping conditions, and assessed the relationships between soil nitrification activity and the abundance of each amoA. Nitrification activity of LHA was highest, followed by that of GLS and YS; this order was consistent with that for the abundance of AOB amoA. Abundance of AOB amoA showed temporal variation, which was similar to that observed in nitrification activity, and a strong relationship (adjusted R(2)=0.742) was observed between the abundance of AOB amoA and nitrification activity. Abundance of AOA amoA also exhibited a significant relationship (adjusted R(2)=0.228) with nitrification activity, although this relationship was much weaker. Our results indicate that soil type affects the community size of AOA and AOB and the resulting nitrification activity, and that AOB are major contributors to nitrification in soils, while AOA are partially responsible.

Fumigation efficacy and emission reduction using low-permeability film in orchard soil fumigation.

PubMed

Gao, Suduan; Sosnoskie, Lynn M; Cabrera, Jose Alfonso; Qin, Ruijun; Hanson, Bradley D; Gerik, James S; Wang, Dong; Browne, Greg T; Thomas, John E

2016-02-01

Many orchards use fumigation to control soilborne pests prior to replanting. Controlling emissions is mandatory to reduce air pollution in California. This research evaluated the effects of plastic film type [polyethylene (PE) or totally impermeable film (TIF)], application rate of Telone C35 [full (610 kg ha(-1) ), 2/3 or 1/3 rates] and carbonation at 207 kPa on fumigant transport (emission and in soil) and efficacy. While increasing fumigant concentrations under the tarp, TIF reduced emissions >95% (∼2% and <1% of total applied 1,3-dichloropropene and chloropicrin respectively) relative to bare soil, compared with ∼30% reduction by PE. All fumigation treatments, regardless of film type, provided good nematode control above 100 cm soil depth; however, nematode survival was high at deeper depths. Weed emergence was mostly affected by tarping and fumigant rate, with no effects from the carbonation. TIF can effectively reduce fumigant emissions. Carbonation under the studied conditions did not improve fumigant dispersion and pest control. The 2/3 rate with TIF controlled nematodes as effectively as the full rate in bare soil or under the PE film to 100 cm soil depth. However, control of nematodes in deeper soil remains a challenge for perennial crops. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Influences of Moisture Regimes and Functional Plant Types on Nutrient Cycling in Permafrost Regions

NASA Astrophysics Data System (ADS)

McCaully, R. E.; Arendt, C. A.; Newman, B. D.; Heikoop, J. M.; Wilson, C. J.; Sevanto, S.; Wales, N. A.; Wullschleger, S.

2017-12-01

In the permafrost-dominated Arctic, climatic feedbacks exist between permafrost, soil moisture, functional plant type and presence of nutrients. Functional plant types present within the Arctic regulate and respond to changes in hydrologic regimes and nutrient cycling. Specifically, alders are a member of the birch family that use root nodules to fix nitrogen, which is a limiting nutrient strongly linked to fertilizing Arctic ecosystems. Previous investigations in the Seward Peninsula, AK show elevated presence of nitrate within and downslope of alder patches in degraded permafrost systems, with concentrations an order of magnitude greater than that of nitrate measured above these patches. Further observations within these degraded permafrost systems are crucial to assess whether alders are drivers of, or merely respond to, nitrate fluxes. In addition to vegetative feedbacks with nitrate supply, previous studies have also linked low moisture content to high nitrate production. Within discontinuous permafrost regions, the absence of permafrost creates well-drained regions with unsaturated soils whereas the presence of permafrost limits vertical drainage of soil-pore water creating elevated soil moisture content, which likely corresponds to lower nitrate concentrations. We investigate these feedbacks further in the Seward Peninsula, AK, through research supported by the United States Department of Energy Next Generation Ecosystem Experiment (NGEE) - Arctic. Using soil moisture and thaw depth as proxies to determine the extent of permafrost degradation, we identify areas of discontinuous permafrost over a heterogeneous landscape and collect co-located soilwater chemistry samples to highlight the complex relationships that exist between alder patches, soil moisture regimes, the presence of permafrost and available nitrate supply. Understanding the role of nitrogen in degrading permafrost systems, in the context of both vegetation present and soil moisture, is crucial to understand the impacts of a warming climate on biogeochemical cycling in permafrost regions.

Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs.

PubMed

Videmsek, Urska; Hagn, Alexandra; Suhadolc, Marjetka; Radl, Viviane; Knicker, Heike; Schloter, Michael; Vodnik, Dominik

2009-07-01

Gaseous conditions at natural CO2 springs (mofettes) affect many processes in these unique ecosystems. While the response of plants to extreme and fluctuating CO2 concentrations ([CO2]) is relatively well documented, little is known on microbial life in mofette soil. Therefore, it was the aim of this study to investigate the abundance and diversity of CO2-fixing bacteria in grassland soils in different distances to a natural carbon dioxide spring. Samples of the same soil type were collected from the Stavesinci mofette, a natural CO2 spring which is known for very pure CO2 emissions, at different distances from the CO2 releasing vents, at locations that clearly differed in soil CO2 efflux (from 12.5 to over 200 micromol CO2 m(-2) s(-1) yearly average). Bulk and rhizospheric soil samples were included into analyses. The microbial response was followed by a molecular analysis of cbbL genes, encoding for the large subunit of RubisCO, a carboxylase which is of crucial importance for C assimilation in chemolitoautotrophic microbes. In all samples analyzed, the "red-like" type of cbbL genes could be detected. In contrast, the "green-like" type of cbbL could not be measured by the applied technique. Surprisingly, a reduction of "red-like" cbbL genes copies was observed in bulk soil and rhizosphere samples from the sites with the highest CO2 concentrations. Furthermore, the diversity pattern of "red-like" cbbL genes changed depending on the CO(2) regime. This indicates that only a part of the autotrophic CO2-fixing microbes could adapt to the very high CO2 concentrations and adverse life conditions that are governed by mofette gaseous regime.

Effects of HMX-lead mixtures on reproduction of the earthworm Eisenia andrei.

PubMed

Savard, Kathleen; Berthelot, Yann; Auroy, Aurelie; Spear, Philip A; Trottier, Bertin; Robidoux, Pierre Yves

2007-10-01

High metal (e.g., Pb) concentrations are typically found in explosive-contaminated soil, and their presence may increase, decrease, or not influence toxicity predicted on the basis of one explosive alone (e.g., HMX). Nevertheless, few data are available in the scientific literature for this type of multiple exposure. Soil organisms, such as earthworms, are one of the first receptors affected by the contamination of soil. Therefore, a reproductive study was conducted using Eisenia andrei in a forest-type soil. Both HMX and Pb decreased reproduction parameters (number of total cocoons, hatched cocoons, and surviving juveniles) individually. Based on the total number of cocoons, HMX was more toxic in a forest soil than Pb, with EC(50) of 31 mg kg(-1), and 1068 mg kg(-1), respectively. The slope of the concentration-response curve was significantly greater in the case of Pb, which is consistent with the possibility that the two compounds do not act on the same target site. The response-addition model was used to predict the response of earthworms and to test for interaction between the two contaminants. The predicted toxicity was not significantly different than the observed toxicity, implying that Pb and HMX were considered noninteractive compounds. The combined action of Pb-HMX may be described, therefore, as dissimilar-noninteractive joint action in a forest soil. The results illustrate the relevance of considering the presence of metals in the risk assessment of explosive-contaminated sites because metals can add their toxicity to explosives. Extension of this study to other types of soil and other metals would improve the understanding of toxicity at these sites.

Global distribution of minerals in arid soils as lower boundary condition in dust models

NASA Astrophysics Data System (ADS)

Nickovic, Slobodan

2010-05-01

Mineral dust eroded from arid soils affects the radiation budget of the Earth system, modifies ocean bioproductivity and influences human health. Dust aerosol is a complex mixture of minerals. Dust mineral composition has several potentially important impacts to environment and society. Iron and phosphorus embedded in mineral aerosol are essential for the primary marine productivity when dust deposits over the open ocean. Dust also acts as efficient agent for heterogeneous ice nucleation and this process is dependent on mineralogical structure of dust. Recent findings in medical geology indicate possible role of minerals to human health. In this study, a new 1-km global database was developed for several minerals (Illite, Kaolinite, Smectite, Calcite, Quartz, Feldspar, Hematite and Gypsum) embedded in clay and silt populations of arid soils. For the database generation, high-resolution data sets on soil textures, soil types and land cover was used. Tin addition to the selected minerals, phosphorus was also added whose geographical distribution was specified from compiled literature and data on soil types. The developed global database was used to specify sources of mineral fractions in the DREAM dust model and to simulate atmospheric paths of minerals and their potential impacts on marine biochemistry and tropospheric ice nucleation.

Emissions of N2O and NO from fertilized fields: Summary of available measurement data

NASA Astrophysics Data System (ADS)

Bouwman, A. F.; Boumans, L. J. M.; Batjes, N. H.

2002-12-01

Information from 846 N2O emission measurements in agricultural fields and 99 measurements for NO emissions was summarized to assess the influence of various factors regulating emissions from mineral soils. The data indicate that there is a strong increase of both N2O and NO emissions accompanying N application rates, and soils with high organic-C content show higher emissions than less fertile soils. A fine soil texture, restricted drainage, and neutral to slightly acidic conditions favor N2O emission, while (though not significant) a good soil drainage, coarse texture, and neutral soil reaction favor NO emission. Fertilizer type and crop type are important factors for N2O but not for NO, while the fertilizer application mode has a significant influence on NO only. Regarding the measurements, longer measurement periods yield more of the fertilization effect on N2O and NO emissions, and intensive measurements (≥1 per day) yield lower emissions than less intensive measurements (2-3 per week). The available data can be used to develop simple models based on the major regulating factors which describe the spatial variability of emissions of N2O and NO with less uncertainty than emission factor approaches based on country N inputs, as currently used in national emission inventories.

Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed

PubMed Central

Wüst, Pia K.; Nacke, Heiko; Kaiser, Kristin; Marhan, Sven; Sikorski, Johannes; Kandeler, Ellen; Daniel, Rolf

2016-01-01

Modern sequencing technologies allow high-resolution analyses of total and potentially active soil microbial communities based on their DNA and RNA, respectively. In the present study, quantitative PCR and 454 pyrosequencing were used to evaluate the effects of different extraction methods on the abundance and diversity of 16S rRNA genes and transcripts recovered from three different types of soils (leptosol, stagnosol, and gleysol). The quality and yield of nucleic acids varied considerably with respect to both the applied extraction method and the analyzed type of soil. The bacterial ribosome content (calculated as the ratio of 16S rRNA transcripts to 16S rRNA genes) can serve as an indicator of the potential activity of bacterial cells and differed by 2 orders of magnitude between nucleic acid extracts obtained by the various extraction methods. Depending on the extraction method, the relative abundances of dominant soil taxa, in particular Actinobacteria and Proteobacteria, varied by a factor of up to 10. Through this systematic approach, the present study allows guidelines to be deduced for the selection of the appropriate extraction protocol according to the specific soil properties, the nucleic acid of interest, and the target organisms. PMID:26896137