Response of runoff and soil loss to reforestation and rainfall type in red soil region of southern China.

PubMed

Huang, Zhigang; Ouyang, Zhiyun; Li, Fengrui; Zheng, Hua; Wang, Xiaoke

2010-01-01

To evaluate the long-term effects of reforestation types on soil erosion on degraded land, vegetation and soil properties under conventional sloping farmland (CSF) and three different reforestation types including a Pinus massoniana secondary forest (PSF), an Eucommia ulmoides artificial economic forest (EEF) and a natural succession type forest (NST), were investigated at runoff plot scale over a six-year period in a red soil region of southern China. One hundred and thirty erosive rainfall events generating runoff in plots were grouped into four rainfall types by means of K-mean clustering method. Erosive rainfall type I is the dominant rainfall type. The amount of runoff and the soil loss under erosive rainfall type III were the most, followed by rain-fall type II, IV and I. Compared with CSF treatment, reforestation treatments decreased the average annual runoff depth and the soil loss by 25.5%-61.8% and 93.9%-96.2% during the study period respectively. Meanwhile, runoff depth at PSF and EEF treatments was significantly lower than that in NST treatment, but no significant difference existed in soil erosion modulus among the three reforestation treatments. This is mainly due to the improved vegetation properties (i.e., vegetation coverage, biomass of above- and below-ground and litter-fall mass) and soil properties (i.e., bulk density, total porosity, infiltration rate and organic carbon content) in the three reforestation treatments compared to CSF treatment. The PSF and EEF are recommended as the preferred reforestation types to control runoff and soil erosion in the red soil region of southern China, with the NST potentially being used as an important supplement.

[Vertical variation in stoichiometric relationships of soil carbon, nitrogen and phosphorus in five forest types in the Maoershan region, Northeast China.

PubMed

Zhang, Tai Dong; Wang, Chuan Kuan; Zhang, Quan Zhi

2017-10-01

Five forests under diverse site conditions but under identical climate in the Maoershan region of Northeast China were sampled for measuring contents of soil carbon (C), nitrogen (N), and phosphorus (P), soil bulk density, and soil thickness by soil profile horizons. The stands included two plantations (i.e., Pinus koraiensis and Larix gmelinii plantations) and three broadleaved forests (i.e., Quercus mongolica stand, Populus davidiana Betula platyphylla mixed stand, and hardwood stand). Our aim was to examine vertical distribution of the content, density, and stoichio metry of soil C, N and P for the five forest types. The results showed that the contents and densities of soil C, N and P differed significantly among the forest types, with the maxima of the soil C and N at both O and A horizons occurring in the hardwood stand. The contents of C and N decreased significantly with increasing soil depth in all the stands. P content decreased significantly only in the broadleaved stands, and P content had no significant difference among different soil layers in the coniferous stands. The soil C/N at the A horizon, N/P at the O horizon, and the C/P at A and B horizons were significantly different among the forest types. The soil C and N linearly correlated significantly across all the forest types without significant differences in the slopes and intercepts, and the soil N and P, or the soil C and P correlated significantly only in the broadleaved stands. This result suggested that the C-N coupling relationship tended to converge across the forest types, and the N-P and C-P relationships varied with forest types.

Soil type-depending effect of paddy management: composition and distribution of soil organic matter

NASA Astrophysics Data System (ADS)

Urbanski, Livia; Kölbl, Angelika; Lehndorff, Eva; Houtermans, Miriam; Schad, Peter; Zhang, Gang-Lin; Rahayu Utami, Sri; Kögel-Knabner, Ingrid

2016-04-01

Paddy soil management is assumed to promote soil organic matter accumulation and specifically lignin caused by the resistance of the aromatic lignin structure against biodegradation under anaerobic conditions during inundation of paddy fields. The present study investigates the effect of paddy soil management on soil organic matter composition compared to agricultural soils which are not used for rice production (non-paddy soils). A variety of major soil types, were chosen in Indonesia (Java), including Alisol, Andosol and Vertisol sites (humid tropical climate of Java, Indonesia) and in China Alisol sites (humid subtropical climate, Nanjing). This soils are typically used for rice cultivation and represent a large range of soil properties to be expected in Asian paddy fields. All topsoils were analysed for their soil organic matter composition by solid-state 13C nuclear magnetic resonance spectroscopy and lignin-derived phenols by CuO oxidation method. The soil organic matter composition, revealed by solid-state 13C nuclear magnetic resonance, was similar for the above named different parent soil types (non-paddy soils) and was also not affected by the specific paddy soil management. The contribution of lignin-related carbon groups to total SOM was similar in the investigated paddy and non-paddy soils. A significant proportion of the total aromatic carbon in some paddy and non-paddy soils was attributed to the application of charcoal as a common management practise. The extraction of lignin-derived phenols revealed low VSC (vanillyl, syringyl, cinnamyl) values for all investigated soils, being typical for agricultural soils. An inherent accumulation of lignin-derived phenols due to paddy management was not found. Lignin-derived phenols seem to be soil type-dependent, shown by different VSC concentrations between the parent soil types. The specific paddy management only affects the lignin-derived phenols in Andosol-derived paddy soils which are characterized by significantly higher VSC values compared to their parent soil types. However, the higher organic carbon concentrations in Andosol and Alisol (China)-derived paddy soils compared to their parent soil types, could not be explained by an enrichment of lignin-derived phenols. It seems that site specific incorporation of crop residues and properties of the parent soil types are likely more important for organic carbon contents and soil organic matter composition than the effect of paddy management itself.

43 CFR 4180.2 - Standards and guidelines for grazing administration.

Code of Federal Regulations, 2014 CFR

2014-10-01

... vegetative ground cover, including standing plant material and litter, to support infiltration, maintain soil... infiltration and permeability rates that are appropriate to soil type, climate and landform. (ii) Riparian... of ground cover to support infiltration, maintain soil moisture storage, and stabilize soils; (ii...

43 CFR 4180.2 - Standards and guidelines for grazing administration.

Code of Federal Regulations, 2012 CFR

2012-10-01

... vegetative ground cover, including standing plant material and litter, to support infiltration, maintain soil... infiltration and permeability rates that are appropriate to soil type, climate and landform. (ii) Riparian... of ground cover to support infiltration, maintain soil moisture storage, and stabilize soils; (ii...

43 CFR 4180.2 - Standards and guidelines for grazing administration.

Code of Federal Regulations, 2011 CFR

2011-10-01

... vegetative ground cover, including standing plant material and litter, to support infiltration, maintain soil... infiltration and permeability rates that are appropriate to soil type, climate and landform. (ii) Riparian... of ground cover to support infiltration, maintain soil moisture storage, and stabilize soils; (ii...

43 CFR 4180.2 - Standards and guidelines for grazing administration.

Code of Federal Regulations, 2013 CFR

2013-10-01

... vegetative ground cover, including standing plant material and litter, to support infiltration, maintain soil... infiltration and permeability rates that are appropriate to soil type, climate and landform. (ii) Riparian... of ground cover to support infiltration, maintain soil moisture storage, and stabilize soils; (ii...

Non-growing season soil CO2 efflux patterns in five land-use types in northern China

USDA-ARS?s Scientific Manuscript database

Overgrazing and unsuitable farming practices have led to grassland degradation in northern China. This studhy examined soil CO2 efflux (Fc) from five land-use types during the non-growing season on the southeastern edge of the Mongolian Plateau in China. The land-use types included three native v...

Effective Classroom Demonstration of Soil Reinforcing Techniques.

ERIC Educational Resources Information Center

Williams, John Wharton; Fox, Dennis James

1986-01-01

Presents a model for demonstrating soil mass stabilization. Explains how this approach can assist students in understanding the various types of soil reinforcement techniques, their relative contribution to increased soil strength, and some of their limitations. A working drawing of the model and directives for construction are included. (ML)

Variation in Soil Respiration across Soil and Vegetation Types in an Alpine Valley

PubMed Central

Rubin, Aurélie

2016-01-01

Background and Aims Soils of mountain regions and their associated plant communities are highly diverse over short spatial scales due to the heterogeneity of geological substrates and highly dynamic geomorphic processes. The consequences of this heterogeneity for biogeochemical transfers, however, remain poorly documented. The objective of this study was to quantify the variability of soil-surface carbon dioxide efflux, known as soil respiration (Rs), across soil and vegetation types in an Alpine valley. To this aim, we measured Rs rates during the peak and late growing season (July-October) in 48 plots located in pastoral areas of a small valley of the Swiss Alps. Findings Four herbaceous vegetation types were identified, three corresponding to different stages of primary succession (Petasition paradoxi in pioneer conditions, Seslerion in more advanced stages and Poion alpinae replacing the climactic forests), as well as one (Rumicion alpinae) corresponding to eutrophic grasslands in intensively grazed areas. Soils were developed on calcareous alluvial and colluvial fan deposits and were classified into six types including three Fluvisols grades and three Cambisols grades. Plant and soil types had a high level of co-occurrence. The strongest predictor of Rs was soil temperature, yet we detected additional explanatory power of sampling month, showing that temporal variation was not entirely reducible to variations in temperature. Vegetation and soil types were also major determinants of Rs. During the warmest month (August), Rs rates varied by over a factor three between soil and vegetation types, ranging from 2.5 μmol m-2 s-1 in pioneer environments (Petasition on Very Young Fluvisols) to 8.5 μmol m-2 s-1 in differentiated soils supporting nitrophilous species (Rumicion on Calcaric Cambisols). Conclusions Overall, this study provides quantitative estimates of spatial and temporal variability in Rs in the mountain environment, and demonstrates that estimations of soil carbon efflux at the watershed scale in complex geomorphic terrain have to account for soil and vegetation heterogeneity. PMID:27685955

Study on Strength Behavior of Organic Soil Stabilized with Fly Ash

PubMed Central

Molla, Md. Keramat Ali; Sarkar, Grytan

2017-01-01

The aim of this study is to investigate the effect of fly ash on the consistency, compactness, acidic properties, and strength of organic soil. The presence of organic content in the soil has detrimental impacts on the physical and strength behavior of soil. To investigate the effectiveness of fly ash in the stabilization of organic soil, two types of fly ashes (Type I and Type II) at different percentages were used. It is found that fly ash significantly reduces the plasticity index of the organic soil, whereas the liquid and plastic limits increase. The dry density of the fly ash-soil mixture increases significantly, while the water requirement reduces due to the addition of fly ash. The increase of dry density compromises higher strength. The increase of qu with the increase of fly ash content is mainly due to the pozzolanic reaction of fly ash, although the reduction in water content results from the addition of dry fly ash solid. Moreover, Type I fly ash contributes a higher value of qu compared to Type II fly ash. This is attributed to the characteristics of fly ash including CaO and CaO/SiO2 ratio. PMID:29085881

Public health assessment for Rockwool Industries, Belton, Bell County, Texas, Region 6, CERCLIS number TXD066379645. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1999-08-03

The Rockwool Industries, Inc. (RWI) National Priorities List site is a 100 acre site one-mile east of downtown Belton in Bell County, Texas. The Facility manufactured two types of mineral wool insulation: Blow wool and batt wool. Three main contaminant source areas have been identified at the site. Source 1, in the middle portion of the site, includes contaminated soil associated with the South Shot Pile. Source 2, in the northern portion of the site, includes contaminated soils associated with the Cemetery Shot Pile. Source 3, in the northwest portion of the site includes contaminated soils associated with the Cemeterymore » Shot Pile. The primary waste types at the site include spent iron shot and baghouse dust. Secondary waste types include boiler blowdown water, stormwater runoff, recovered groundwater, and bricks. The Texas Department of Health (TDH) and the Agency for Toxic Substances and Disease Registry (ATSDR) evaluated the environmental information available for the site and identified several exposure situations for evaluation. These exposure situations include possible contact with site contaminants in the soil, surface water, sediment, and groundwater. The potential for exposure to site contaminants through the food chain was also examined. A brief review of the evaluation, organized by hazard category, is presented.« less

N2O emissions from humid tropical agricultural soils: effects of soil moisture, texture and nitrogen availability

Treesearch

A.M. Weitza; E. Linderb; S. Frolkingc; P.M. Crillc; M. Keller

2001-01-01

We studied soil moisture dynamics and nitrous oxide (N2O) ¯uxes from agricultural soils in the humid tropics of Costa Rica. Using a splitplot design on two soils (clay, loam) we compared two crop types (annual, perennial) each unfertilized and fertilized. Both soils are of andic origin. Their properties include relatively low bulk density and high organic matter...

Impact of understory vegetation on soil carbon and nitrogen dynamic in aerially seeded Pinus massoniana plantations.

PubMed

Pan, Ping; Zhao, Fang; Ning, Jinkui; Zhang, Ling; Ouyang, Xunzhi; Zang, Hao

2018-01-01

Understory vegetation plays a vital role in regulating soil carbon (C) and nitrogen (N) characteristics due to differences in plant functional traits. Different understory vegetation types have been reported following aerial seeding. While aerial seeding is common in areas with serious soil erosion, few studies have been conducted to investigate changes in soil C and N cycling as affected by understory vegetation in aerially seeded plantations. Here, we studied soil C and N characteristics under two naturally formed understory vegetation types (Dicranopteris and graminoid) in aerially seeded Pinus massoniana Lamb plantations. Across the two studied understory vegetation types, soil organic C was significantly correlated with all measured soil N variables, including total N, available N, microbial biomass N and water-soluble organic N, while microbial biomass C was correlated with all measured variables except soil organic C. Dicranopteris and graminoid differed in their effects on soil C and N process. Except water-soluble organic C, all the other C and N variables were higher in soils with graminoids. The higher levels of soil organic C, microbial biomass C, total N, available N, microbial biomass N and water-soluble organic N were consistent with the higher litter and root quality (C/N) of graminoid vegetation compared to Dicranopteris. Changes in soil C and N cycles might be impacted by understory vegetation types via differences in litter or root quality.

Impact of understory vegetation on soil carbon and nitrogen dynamic in aerially seeded Pinus massoniana plantations

PubMed Central

Pan, Ping; Zhao, Fang; Ning, Jinkui; Ouyang, Xunzhi; Zang, Hao

2018-01-01

Understory vegetation plays a vital role in regulating soil carbon (C) and nitrogen (N) characteristics due to differences in plant functional traits. Different understory vegetation types have been reported following aerial seeding. While aerial seeding is common in areas with serious soil erosion, few studies have been conducted to investigate changes in soil C and N cycling as affected by understory vegetation in aerially seeded plantations. Here, we studied soil C and N characteristics under two naturally formed understory vegetation types (Dicranopteris and graminoid) in aerially seeded Pinus massoniana Lamb plantations. Across the two studied understory vegetation types, soil organic C was significantly correlated with all measured soil N variables, including total N, available N, microbial biomass N and water-soluble organic N, while microbial biomass C was correlated with all measured variables except soil organic C. Dicranopteris and graminoid differed in their effects on soil C and N process. Except water-soluble organic C, all the other C and N variables were higher in soils with graminoids. The higher levels of soil organic C, microbial biomass C, total N, available N, microbial biomass N and water-soluble organic N were consistent with the higher litter and root quality (C/N) of graminoid vegetation compared to Dicranopteris. Changes in soil C and N cycles might be impacted by understory vegetation types via differences in litter or root quality. PMID:29377926

Relating soil geochemical properties to arsenic bioaccessibility through hierarchical modeling.

EPA Science Inventory

Interest in improved understanding of relationships among soil properties and arsenic (As) bioaccessibility has motivated the use of regression models for As bioaccessibility prediction. However, limits in the numbers and types of soils included in previous studies restrict the u...

Microbial effects on two tropical soils amended with different types of biochar

NASA Astrophysics Data System (ADS)

Paz, Jorge; Méndez, Ana; Fun, Shenglei; Gascó, Gabriel

2013-04-01

There is an increasing interest in using biochar as soil amendment due to its potential to reduce greenhouse gas emissions from soils and to mitigate heavy metal pollution. In addition, sometimes biochar has been found to increase soil productivity due to its favourable effect on soil aggregation and water holding capacity. However, results obtained can differ greatly depending on the type of biochar utilised. On the other hand, the response of the microbial community to biochar addition is not so well understood. In our experiment we have sampled two soils, differing in their fertility status. A greenhouse pot experiment was established to see the effect of adding four different biochars, differing on their feedstock (Miscanthus, sewage sludge, paper mill waste and pinewood). Additionally, half of the samples excluded soil earthworms, while the other half had 3 individuals of the earthworm Pontoscolex corethrurus. Pots, containing 400 g of soil, were planted with proso millet. Assessed parameters included millet height, soil microbial biomass and soil enzymatic activity related to different biogeochemical cycles (invertase, B-glucosaminidase, B-glucosidase, urease, phosphomonoesterase, arylsulphatase) The effects of biochar on soil biological properties depended on the type of feedstock used for biochar production and pre-existent soil parameters such as soil fertility status. Earthworm presence generally had a positive effect on soil microbial properties.

Soil respiration and organic carbon dynamics with grassland conversions to woodlands in temperate china.

PubMed

Wang, Wei; Zeng, Wenjing; Chen, Weile; Zeng, Hui; Fang, Jingyun

2013-01-01

Soils are the largest terrestrial carbon store and soil respiration is the second-largest flux in ecosystem carbon cycling. Across China's temperate region, climatic changes and human activities have frequently caused the transformation of grasslands to woodlands. However, the effect of this transition on soil respiration and soil organic carbon (SOC) dynamics remains uncertain in this area. In this study, we measured in situ soil respiration and SOC storage over a two-year period (Jan. 2007-Dec. 2008) from five characteristic vegetation types in a forest-steppe ecotone of temperate China, including grassland (GR), shrubland (SH), as well as in evergreen coniferous (EC), deciduous coniferous (DC) and deciduous broadleaved forest (DB), to evaluate the changes of soil respiration and SOC storage with grassland conversions to diverse types of woodlands. Annual soil respiration increased by 3%, 6%, 14%, and 22% after the conversion from GR to EC, SH, DC, and DB, respectively. The variation in soil respiration among different vegetation types could be well explained by SOC and soil total nitrogen content. Despite higher soil respiration in woodlands, SOC storage and residence time increased in the upper 20 cm of soil. Our results suggest that the differences in soil environmental conditions, especially soil substrate availability, influenced the level of annual soil respiration produced by different vegetation types. Moreover, shifts from grassland to woody plant dominance resulted in increased SOC storage. Given the widespread increase in woody plant abundance caused by climate change and large-scale afforestation programs, the soils are expected to accumulate and store increased amounts of organic carbon in temperate areas of China.

Response of deep soil moisture to land use and afforestation in the semi-arid Loess Plateau, China

NASA Astrophysics Data System (ADS)

Yang, Lei; Wei, Wei; Chen, Liding; Mo, Baoru

2012-12-01

SummarySoil moisture is an effective water source for plant growth in the semi-arid Loess Plateau of China. Characterizing the response of deep soil moisture to land use and afforestation is important for the sustainability of vegetation restoration in this region. In this paper, the dynamics of soil moisture were quantified to evaluate the effect of land use on soil moisture at a depth of 2 m. Specifically, the gravimetric soil moisture content was measured in the soil layer between 0 and 8 m for five land use types in the Longtan catchment of the western Loess Plateau. The land use types included traditional farmland, native grassland, and lands converted from traditional farmland (pasture grassland, shrubland and forestland). Results indicate that the deep soil moisture content decreased more than 35% after land use conversion, and a soil moisture deficit appeared in all types of land with introduced vegetation. The introduced vegetation decreased the soil moisture content to levels lower than the reference value representing no human impact in the entire 0-8 m soil profile. No significant differences appeared between different land use types and introduced vegetation covers, especially in deeper soil layers, regardless of which plant species were introduced. High planting density was found to be the main reason for the severe deficit of soil moisture. Landscape management activities such as tillage activities, micro-topography reconstruction, and fallowed farmland affected soil moisture in both shallow and deep soil layers. Tillage and micro-topography reconstruction can be used as effective countermeasures to reduce the soil moisture deficit due to their ability to increase soil moisture content. For sustainable vegetation restoration in a vulnerable semi-arid region, the plant density should be optimized with local soil moisture conditions and appropriate landscape management practices.

Soil data from Picea mariana stands near delta junction, Alaska of different ages and soil drainage type

USGS Publications Warehouse

Manies, Kristen L.; Harden, Jennifer W.; Silva, Steven R.; Briggs, Paul H.; Schmid, Brian M.

2004-01-01

The U.S. Geological Survey project Fate of Carbon in Alaskan Landscapes (FOCAL) is studying the effect of fire and soil drainage on soil carbon storage in the boreal forest. This project has selected several sites to study within central Alaska of varying ages (time since fire) and soil drainage types. This report describes the location of these sampling sites, as well as the procedures used to describe, sample, and analyze the soils. This report also contains data tables with this information, including, but not limited to field descriptions, bulk density, particle size distribution, moisture content, carbon (C) concentration, nitrogen (N) concentration, isotopic data for C, and major, minor and trace elemental concentration.

Hands-in Science.

ERIC Educational Resources Information Center

Furlough, Vickie; And Others

1997-01-01

Describes an earth science unit in which students study soil from their own backyards through a series of integrated activities. Introduces several earth science concepts, including local geology and the development of different types of geological regions. Presents activities to make a county soil map, measure moisture in soil, and measure the…

Anthropic changes to the biotic factor of soil formation from forests to managed grasslands along summits of the western Pyrenees Mountains, France

NASA Astrophysics Data System (ADS)

Leigh, David; Gragson, Theodore

2017-04-01

Mounting evidence indicates that highland pastures of the humid-temperate western Pyrenees were converted from mixed forests to managed grasslands thousands of years ago, as early as during the late Neolithic and Bronze age by human actions including use of fire. We observe pronounced differences between soil profiles of ancient pastures and old-growth forests in otherwise similar landscape positions. In order to test physical and chemical differences, we collected paired samples of forest versus grassland soils at four separate hillslope sites where there was a clear boundary between the two vegetation types. Animal trails were excluded from sampling. Factors of climate, topography, parent material, and time of soil formation were essentially identical in the forests and pastures of each site, but the time of soil under grassland vegetation may have varied. Each paired hillslope site included five core samples (7.6 cm diameter) from the upper 7.6 cm of the mineral soil within each vegetation type, and the A horizon thickness was recorded at each core hole site. In addition, one complete soil profile was sampled in each vegetation type at each site, making a total of 20 core samples and 4 complete profiles from each respective vegetation type. In addition, we measured the magnetic susceptibility of the mineral soil surface on two transects crossing the vegetation boundary. Core samples have been measured for bulk density, pH, plant-available nutrients, and organic matter; and tests for total carbon and nitrogen, amorphous silica, charcoal, and other forms of black carbon are ongoing. Preliminary results indicate pastured A horizons are about three times as thick as forested soils, contain more organic matter, have lower soil bulk densities, have much finer and stronger structural development of soil aggregates. These traits favor much greater infiltration and water holding capacities of the pastured soils, which we have validated with saturated hydraulic conductivity tests. Pedogenically, the pastured soils indicate that melanization processes have been much more pronounced than in the forested soils. Distinct changes in soil materials result from conversion to pasture. Significantly more black carbon (including macro-charcoal) appears to be present in the pastured soils, indicating that it plays an important role in melanization, in addition to long-term sequestration of carbon. Pastured soils contain greater contents of amorphous silica due to more rapid phytolith production from grasses as opposed to trees. Pastures register significantly higher soil magnetic susceptibility than forests, presumably from past use of fire. In essence, anthropic manipulation of the biotic factor of pedogenesis has created new soil materials, processes, and functions. Our current research involves radiocarbon and chronostratigraphy to establish rates of this anthropisation of the biotic factor.

Estimated Annual Net Change in Soil Carbon per US County, 1990-2004

DOE Data Explorer

West, Tristram O.; Brandt, Craig C.; Wilson, Bradly S.; Hellwinckel, Chap M.; Tyler, Donald D.; Marland, Gregg; De La Torre Ugarte, Daniel D.; Larson, James A.; Nelson, Richard G.

2008-01-01

These data represent the estimated net change (Megagram per year) in soil carbon due to changes in the crop type and tillage intensity. Estimated accumulation of soil carbon under Conservation Reserve Program (CRP)lands is included in these estimates. Negative values represent a net flux from the atmosphere to the soil; positive values represent a net flux from the soil to the atmosphere. As such, soil carbon sequestration is represented here as a negative value.

Soil types influence the fate of antibiotic-resistant bacteria and antibiotic resistance genes following the land application of sludge composts.

PubMed

Zhang, Junya; Sui, Qianwen; Tong, Juan; Zhong, Hui; Wang, Yawei; Chen, Meixue; Wei, Yuansong

2018-05-21

Sewage sludge was generally considered a significant reservoir of antibiotic resistance genes (ARGs) and could enter agricultural systems as fertilizer after composting. Soil types and the discrepancy of sludge composts could have influenced the fate of antibiotic-resistant bacteria (ARB) following the land application of sludge composts, which deserved to be clarified. Thus, the fate of ARB and ARGs following the land application of three types of sludge composts (A, B, and C) to three different soils (red soil, loess, and black soil) was investigated. The results showed that tetX, which was enriched the most during composting, did not affect the soil resistome, whereas tetG did. Soil types influenced the dynamics of ARB and ARGs significantly, whereas no significant difference was observed among compost types. The advantage of reducing ARGs during the composting process in compost B did not extend to land application. Land application of composts influenced the microbial community significantly at the early stage, but the microbial community returned to the control pattern gradually. Changes in the microbial community contributed more to the dynamics of ARGs in red and black soil compared with other factors, including co-selection from heavy metals, horizontal gene transfer, biomass and environmental factors, whereas horizontal gene transfer, reflected by intI1 levels, contributed the most in loess. Copyright © 2018 Elsevier Ltd. All rights reserved.

Reducing CO2 flux by decreasing tillage in Ohio: overcoming conjecture with data

USDA-ARS?s Scientific Manuscript database

Soil could become an important sink for atmospheric carbon dioxide (CO2) as global agricultural greenhouse gas emissions continue to grow, but data to support this conjecture are few. Sequestering soil carbon (C) depends upon many factors including soil type, climate, crop, tillage, nitrogen fertili...

THERMAL NEUTRON INTENSITIES IN SOILS IRRADIATED BY FAST NEUTRONS FROM POINT SOURCES. (R825549C054)

EPA Science Inventory

Thermal-neutron fluences in soil are reported for selected fast-neutron sources, selected soil types, and selected irradiation geometries. Sources include 14 MeV neutrons from accelerators, neutrons from spontaneously fissioning ²⁵²Cf, and neutrons produced from alp...

Soil Respiration and Organic Carbon Dynamics with Grassland Conversions to Woodlands in Temperate China

PubMed Central

Wang, Wei; Zeng, Wenjing; Chen, Weile; Zeng, Hui; Fang, Jingyun

2013-01-01

Soils are the largest terrestrial carbon store and soil respiration is the second-largest flux in ecosystem carbon cycling. Across China's temperate region, climatic changes and human activities have frequently caused the transformation of grasslands to woodlands. However, the effect of this transition on soil respiration and soil organic carbon (SOC) dynamics remains uncertain in this area. In this study, we measured in situ soil respiration and SOC storage over a two-year period (Jan. 2007–Dec. 2008) from five characteristic vegetation types in a forest-steppe ecotone of temperate China, including grassland (GR), shrubland (SH), as well as in evergreen coniferous (EC), deciduous coniferous (DC) and deciduous broadleaved forest (DB), to evaluate the changes of soil respiration and SOC storage with grassland conversions to diverse types of woodlands. Annual soil respiration increased by 3%, 6%, 14%, and 22% after the conversion from GR to EC, SH, DC, and DB, respectively. The variation in soil respiration among different vegetation types could be well explained by SOC and soil total nitrogen content. Despite higher soil respiration in woodlands, SOC storage and residence time increased in the upper 20 cm of soil. Our results suggest that the differences in soil environmental conditions, especially soil substrate availability, influenced the level of annual soil respiration produced by different vegetation types. Moreover, shifts from grassland to woody plant dominance resulted in increased SOC storage. Given the widespread increase in woody plant abundance caused by climate change and large-scale afforestation programs, the soils are expected to accumulate and store increased amounts of organic carbon in temperate areas of China. PMID:24058408

Dissolved organic carbon fluxes from soils in the Alaskan coastal temperate rainforest

NASA Astrophysics Data System (ADS)

D'Amore, D. V.; Edwards, R.; Hood, E. W.; Herendeen, P. A.; Valentine, D.

2011-12-01

Soil saturation and temperature are the primary factors that influence soil carbon cycling. Interactions between these factors vary by soil type, climate, and landscape position, causing uncertainty in predicting soil carbon flux from. The soils of the North American perhumid coastal temperate rainforest (NCTR) store massive amounts of carbon, yet there is no estimate of dissolved organic carbon (DOC) export from different soil types in the region. There are also no working models that describe the influence of soil saturation and temperature on the export of DOC from soils. To address this key information gap, we measured soil water table elevation, soil temperature, and soil and stream DOC concentrations to calculate DOC flux across a soil hydrologic gradient that included upland soils, forested wetland soils, and sloping bog soils in the NCTR of southeast Alaska. We found that increased soil temperature and frequent fluctuations of soil water tables promoted the export of large quantities of DOC from wetland soils and relatively high amounts of DOC from mineral soils. Average area-weighted DOC flux ranged from 7.7 to 33.0 g C m-2 y-1 across a gradient of hydropedologic soil types. The total area specific export of carbon as DOC for upland, forested wetland and sloping bog catchments was 77, 306, and 329 Kg C ha-1 y-1 respectively. The annual rate of carbon export from wetland soils in this region is among the highest reported in the literature. These findings highlight the importance of terrestrial-aquatic fluxes of DOC as a pathway for carbon loss in the NCTR.

Modeling global annual N2O and NO emissions from fertilized fields

NASA Astrophysics Data System (ADS)

Bouwman, A. F.; Boumans, L. J. M.; Batjes, N. H.

2002-12-01

Information from 846 N2O emission measurements in agricultural fields and 99 measurements for NO emissions was used to describe the influence of various factors regulating emissions from mineral soils in models for calculating global N2O and NO emissions. Only those factors having a significant influence on N2O and NO emissions were included in the models. For N2O these were (1) environmental factors (climate, soil organic C content, soil texture, drainage and soil pH); (2) management-related factors (N application rate per fertilizer type, type of crop, with major differences between grass, legumes and other annual crops); and (3) factors related to the measurements (length of measurement period and frequency of measurements). The most important controls on NO emission include the N application rate per fertilizer type, soil organic-C content and soil drainage. Calculated global annual N2O-N and NO-N emissions from fertilized agricultural fields amount to 2.8 and 1.6 Mtonne, respectively. The global mean fertilizer-induced emissions for N2O and NO amount to 0.9% and 0.7%, respectively, of the N applied. These overall results account for the spatial variability of the main N2O and NO emission controls on the landscape scale.

Impact of rainfall patterns and frequency on the export of pesticides and heavy-metals from agricultural soils.

PubMed

Meite, Fatima; Alvarez-Zaldívar, Pablo; Crochet, Alexandre; Wiegert, Charline; Payraudeau, Sylvain; Imfeld, Gwenaël

2018-03-01

The combined influence of soil characteristics, pollutant aging and rainfall patterns on the export of pollutants from topsoils is poorly understood. We used laboratory experiments and parsimonious modeling to evaluate the impact of rainfall characteristics on the ponding and the leaching of a pollutant mixture from topsoils. The mixture included the fungicide metalaxyl, the herbicide S-metolachlor, as well as copper (Cu) and zinc (Zn). Four rainfall patterns, which differed in their durations and intensities, were applied twice successively with a 7days interval on each soil type. To evaluate the influence of soil type and aging, experiments included crop and vineyard soils and two stages of pollutant aging (0 and 10days). The global export of pollutants was significantly controlled by the rainfall duration and frequency (P<0.01). During the first rainfall event, the longest and most intense rainfall pattern yielded the largest export of metalaxyl (44.5±21.5% of the initial mass spiked in the soils), S-metolachlor (8.1±3.1%) and Cu (3.1±0.3%). Soil compaction caused by the first rainfall reduced in the second rainfall the leaching of remaining metalaxyl, S-metolachlor, Cu and Zn by 2.4-, 2.9-, 30- and 50-fold, respectively. In contrast, soil characteristics and aging had less influence on pollutant mass export. The soil type significantly influenced the leaching of Zn, while short-term aging impacted Cu leaching. Our results suggest that rainfall characteristics predominantly control export patterns of metalaxyl and S-metolachlor, in particular when the aging period is short. We anticipate our study to be a starting point for more systematic evaluation of the dissolved pollutant ponding/leaching partitioning and the export of pollutant mixtures from different soil types in relation to rainfall patterns. Copyright © 2017 Elsevier B.V. All rights reserved.

Climate, soil texture, and soil types affect the contributions of fine-fraction-stabilized carbon to total soil organic carbon in different land uses across China.

PubMed

Cai, Andong; Feng, Wenting; Zhang, Wenju; Xu, Minggang

2016-05-01

Mineral-associated organic carbon (MOC), that is stabilized by fine soil particles (i.e., silt plus clay, <53 μm), is important for soil organic carbon (SOC) persistence and sequestration, due to its large contribution to total SOC (TSOC) and long turnover time. Our objectives were to investigate how climate, soil type, soil texture, and agricultural managements affect MOC contributions to TSOC in China. We created a dataset from 103 published papers, including 1106 data points pairing MOC and TSOC across three major land use types: cropland, grassland, and forest. Overall, the MOC/TSOC ratio ranged from 0.27 to 0.80 and varied significantly among soil groups in cropland, grassland, and forest. Croplands and forest exhibited significantly higher median MOC/TSOC ratios than in grassland. Moreover, forest and grassland soils in temperate regions had higher MOC/TSOC ratios than in subtropical regions. Furthermore, the MOC/TSOC ratio was much higher in ultisol, compared with the other soil types. Both the MOC content and MOC/TSOC ratio were positively correlated with the amount of fine fraction (silt plus clay) in soil, highlighting the importance of soil texture in stabilizing organic carbon across various climate zones. In cropland, different fertilization practices and land uses (e.g., upland, paddy, and upland-paddy rotation) significantly altered MOC/TSOC ratios, but not in cropping systems (e.g., mono- and double-cropping) characterized by climatic differences. This study demonstrates that the MOC/TSOC ratio is mainly driven by soil texture, soil types, and related climate and land uses, and thus the variations in MOC/TSOC ratios should be taken into account when quantitatively estimating soil C sequestration potential of silt plus clay particles on a large scale. Copyright © 2016 Elsevier Ltd. All rights reserved.

Soil process-oriented modelling of within-field variability based on high-resolution 3D soil type distribution maps.

NASA Astrophysics Data System (ADS)

Bönecke, Eric; Lück, Erika; Gründling, Ralf; Rühlmann, Jörg; Franko, Uwe

2016-04-01

Today, the knowledge of within-field variability is essential for numerous purposes, including practical issues, such as precision and sustainable soil management. Therefore, process-oriented soil models have been applied for a considerable time to answer question of spatial soil nutrient and water dynamics, although, they can only be as consistent as their variation and resolution of soil input data. Traditional approaches, describe distribution of soil types, soil texture or other soil properties for greater soil units through generalised point information, e.g. from classical soil survey maps. Those simplifications are known to be afflicted with large uncertainties. Varying soil, crop or yield conditions are detected even within such homogenised soil units. However, recent advances of non-invasive soil survey and on-the-go monitoring techniques, made it possible to obtain vertical and horizontal dense information (3D) about various soil properties, particularly soil texture distribution which serves as an essential soil key variable affecting various other soil properties. Thus, in this study we based our simulations on detailed 3D soil type distribution (STD) maps (4x4 m) to adjacently built-up sufficient informative soil profiles including various soil physical and chemical properties. Our estimates of spatial STD are based on high-resolution lateral and vertical changes of electrical resistivity (ER), detected by a relatively new multi-sensor on-the-go ER monitoring device. We performed an algorithm including fuzzy-c-mean (FCM) logic and traditional soil classification to estimate STD from those inverted and layer-wise available ER data. STD is then used as key input parameter for our carbon, nitrogen and water transport model. We identified Pedological horizon depths and inferred hydrological soil variables (field capacity, permanent wilting point) from pedotransferfunctions (PTF) for each horizon. Furthermore, the spatial distribution of soil organic carbon (SOC), as essential input variable, was predicted by measured soil samples and associated to STD of the upper 30 cm. The comprehensive and high-resolution (4x4 m) soil profile information (up to 2 m soil depth) were then used to initialise a soil process model (Carbon and Nitrogen Dynamics - CANDY) for soil functional modelling (daily steps of matter fluxes, soil temperature and water balances). Our study was conducted on a practical field (~32,000 m²) of an agricultural farm in Central Germany with Chernozem soils under arid conditions (average rainfall < 550 mm). This soil region is known to have differences in soil structure mainly occurring within the subsoil, since topsoil conditions are described as homogenous. The modelled soil functions considered local climate information and practical farming activities. Results show, as expected, distinguished functional variability, both on spatial and temporal resolution for subsoil evident structures, e.g. visible differences for available water capacity within 0-100 cm but homogenous conditions for the topsoil.

A comprehensive guide of remediation technologies for oil contaminated soil - Present works and future directions.

PubMed

Lim, Mee Wei; Lau, Ee Von; Poh, Phaik Eong

2016-08-15

Oil spills result in negative impacts on the environment, economy and society. Due to tidal and waves actions, the oil spillage affects the shorelines by adhering to the soil, making it difficult for immediate cleaning of the soil. As shoreline clean-up is the most costly component of a response operation, there is a need for effective oil remediation technologies. This paper provides a review on the remediation technologies for soil contaminated with various types of oil, including diesel, crude oil, petroleum, lubricating oil, bitumen and bunker oil. The methods discussed include solvent extraction, bioremediation, phytoremediation, chemical oxidation, electrokinetic remediation, thermal technologies, ultrasonication, flotation and integrated remediation technologies. Each of these technologies was discussed, and associated with their advantages, disadvantages, advancements and future work in detail. Nonetheless, it is important to note that no single remediation technology is considered the best solution for the remediation of oil contaminated soil. This review provides a comprehensive literature on the various remediation technologies studied in the removal of different oil types from soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Bare soil and rill formation following wildfires, fuel reduction treatments, and pine plantations in the southern Sierra Nevada, California, USA

Treesearch

Neil H. Berg; David L. Azuma

2010-01-01

Accelerated erosion commonly occurs after wildfires on forested lands. As burned areas recover, erosion returns towards prefire rates depending on many site-specific characteristics, including fire severity, vegetation type, soil type and climate. In some areas, erosion recovery can be rapid, particularly where revegetation is quick. Erosion recovery is less well...

Soil functional types: surveying the biophysical dimensions of soil security

NASA Astrophysics Data System (ADS)

Cécillon, Lauric; Barré, Pierre

2015-04-01

Soil is a natural capital that can deliver key ecosystem services (ES) to humans through the realization of a series of soil processes controlling ecosystem functioning. Soil is also a diverse and endangered natural resource. A huge pedodiversity has been described at all scales, which is strongly altered by global change. The multidimensional concept soil security, encompassing biophysical, economic, social, policy and legal frameworks of soils has recently been proposed, recognizing the role of soils in global environmental sustainability challenges. The biophysical dimensions of soil security focus on the functionality of a given soil that can be viewed as the combination of its capability and its condition [1]. Indeed, all soils are not equal in term of functionality. They show different processes, provide different ES to humans and respond specifically to global change. Knowledge of soil functionality in space and time is thus a crucial step towards the achievement soil security. All soil classification systems incorporate some functional information, but soil taxonomy alone cannot fully describe the functioning, limitations, resistance and resilience of soils. Droogers and Bouma [2] introduced functional variants (phenoforms) for each soil type (genoform) so as to fit more closely to soil functionality. However, different genoforms can have the same functionality. As stated by McBratney and colleagues [1], there is a great need of an agreed methodology for defining the reference state of soil functionality. Here, we propose soil functional types (SFT) as a relevant classification system for the biophysical dimensions of soil security. Following the definition of plant functional types widely used in ecology, we define a soil functional type as "a set of soil taxons or phenoforms sharing similar processes (e.g. soil respiration), similar effects on ecosystem functioning (e.g. primary productivity) and similar responses to global change (land-use, management or climate) for a particular soil-provided ecosystem service (e.g. climate regulation)". One SFT can thus include several soil types having the same functionality for a particular soil-provided ES. Another consequence is that SFT maps for two different ES may not superimpose over the same area, since some soils may fall in the same SFT for a service and in different SFT for another one. Soil functional types could be assessed and monitored in space and time by a combination of soil functional traits that correspond to inherent and manageable properties of soils. Their metrology would involve either classic (pedological observations) or advanced (molecular ecology, spectrometry, geophysics) tools. SFT could be studied and mapped at all scales, depending on the purpose of the soil security assessment (e.g. global climate modeling, land planning and management, biodiversity conservation). Overall, research is needed to find a pathway from soil pedological maps to SFT maps which would yield important benefits towards the assessment and monitoring of soil security. Indeed, this methodology would allow (i) reducing the spatial uncertainty on the assessment of ES; (ii) identifying and mapping multifunctional soils, which may be the most important soil resource to preserve. References [1] McBratney et al., 2014. Geoderma 213:203-213. [2] Droogers P, Bouma J, 1997. SSSAJ 61:1704-1710.

Climate response of the soil nitrogen cycle in three forest types of a headwater Mediterranean catchment

NASA Astrophysics Data System (ADS)

Lupon, Anna; Gerber, Stefan; Sabater, Francesc; Bernal, Susana

2015-05-01

Future changes in climate may affect soil nitrogen (N) transformations, and consequently, plant nutrition and N losses from terrestrial to stream ecosystems. We investigated the response of soil N cycling to changes in soil moisture, soil temperature, and precipitation across three Mediterranean forest types (evergreen oak, beech, and riparian) by fusing a simple process-based model (which included climate modifiers for key soil N processes) with measurements of soil organic N content, mineralization, nitrification, and concentration of ammonium and nitrate. The model describes sources (atmospheric deposition and net N mineralization) and sinks (plant uptake and hydrological losses) of inorganic N from and to the 0-10 cm soil pool as well as net nitrification. For the three forest types, the model successfully recreated the magnitude and temporal pattern of soil N processes and N concentrations (Nash-Sutcliffe coefficient = 0.49-0.96). Changes in soil water availability drove net N mineralization and net nitrification at the oak and beech forests, while temperature and precipitation were the strongest climatic factors for riparian soil N processes. In most cases, net N mineralization and net nitrification showed a different sensitivity to climatic drivers (temperature, soil moisture, and precipitation). Our model suggests that future climate change may have a minimal effect on the soil N cycle of these forests (<10% change in mean annual rates) because positive warming and negative drying effects on the soil N cycle may counterbalance each other.

Influence of environmental pollution with creosote oil or its vapors on biomass and selected physiological groups of microorganisms

NASA Astrophysics Data System (ADS)

Krzyśko-Łupicka, Teresa; Cybulska, Krystyna; Kołosowski, Paweł; Telesiński, Arkadiusz; Sudoł, Adam

2017-11-01

Survival of microorganisms in soils from treatment facility and landfill of wooden railway sleepers contaminated with creosote oil as well as in two types of soils with different content of organic carbon, treated with creosote oil vapors, was assessed. Microbiological assays including determination of: the biomass of living microorganisms method and the number of proteolytic, lipolytic and amylolytic microorganisms were carried out under laboratory conditions. Chromatography analysis of the soil extract from railway sleepers treatment facility was performed using GC/MS. The highest biomass and the number of tested microorganisms were determined in soils from wooden railway sleepers landfill, while the lowest in soil from the railway sleepers treatment facility. Vapors of creosote oil, regardless of the soil type, significantly increased only the number of lipolytic bacteria.

Woody vegetation and soil characteristics of residential forest patches and open spaces along an urban-to-rural gradient

Treesearch

Benjamin L. Reichert; Sharon R. Jean-Philippe; Christopher Oswalt; Jennifer Franklin; Mark Radosevich

2015-01-01

As the process of urbanization advances across the country, so does the importance of urban forests, which include both trees and the soils in which they grow. Soil microbial biomass, which plays a critical role in nutrient transformation in urban ecosystems, is affected by factors such as soil type and the availability of water, carbon, and nitrogen. The aim of this...

Biogenic nitric oxide emission from a spruce forest soil in mountainous terrain

NASA Astrophysics Data System (ADS)

Falge, Eva; Bargsten, Anika; Behrendt, Thomas; Meixner, Franz X.

2010-05-01

The process-based spatial simulation model SVAT-CN was used to estimate biogenic nitric oxide (NO) emission by soils of a Norway spruce forest (Weidenbrunnen) in the Fichtelgebirge, Germany. SVAT-CN core is a combination of a multiple-layer soil water balance model and a multi-layered canopy gas exchange model. The soil modules comprise a flexible hybrid between a layered bucket model and classical basic liquid flow theory. Further soil processes include: heat transport, distribution of transpiration demand proportionally to soil resistance, reduction of leaf physiological parameters with limiting soil moisture. Spruce forest soils usually are characterized by a thick organic layer (raw humus), with the topmost centimetres being the location where most of the biogenic NO is produced. Within individual spruce forest stands the understory might be composed of patches characterized by different species (e.g. Vaccinium myrtillus, Picea abies, Deschampsia caespitosa), and NO production potentials. The effect of soil physical and chemical parameters and understory types on NO emission from the organic layer was investigated in laboratory incubation and fumigation experiments on soils sampled below the various understory covers found at the Weidenbrunnen site. Results from the laboratory experiments were used to parameterize multi-factorial regression models of soil NO emission with respect to its response to soil temperature and moisture. Parameterization of the spatial model SVAT-CN includes horizontal heterogeneity of over- and understory PAI, understory species distribution, soil texture, bulk density, thickness of organic layer. Simulations are run for intensive observations periods of 2007 and 2008 of the EGER (ExchanGE processes in mountainous Regions) project, a late summer/fall and an early summer period, providing estimates for different understory types (young spruce, blueberry, grass, and moss/litter patches). Validation of the model is being carried out at point scale, by comparison with measured soil moisture and temperature data at 12 locations at the Weidenbrunnen site. In addition model output is compared to soil NO emission data from dynamic chambers. Understory type was found to have a strong influence on the magnitude of soil NO emissions, with emissions from blueberry and young spruce one order of magnitude larger than those from grass or moss/litter patches.

Global distribution of soil organic carbon, based on the Harmonized World Soil Database - Part 1: Masses and frequency distribution of SOC stocks for the tropics, permafrost regions, wetlands, and the world

NASA Astrophysics Data System (ADS)

Köchy, M.; Hiederer, R.; Freibauer, A.

2014-09-01

The global soil organic carbon (SOC) mass is relevant for the carbon cycle budget. We review current estimates of soil organic carbon stocks (mass/area) and mass (stock × area) in wetlands, permafrost and tropical regions and the world in the upper 1 m of soil. The Harmonized World Soil Database (HWSD) v.1.2 provides one of the most recent and coherent global data sets of SOC, giving a total mass of 2476 Pg. Correcting the HWSD's bulk density of organic soils, especially Histosols, results in a mass of 1062 Pg. The uncertainty of bulk density of Histosols alone introduces a range of -56 to +180 Pg for the estimate of global SOC in the top 1 m, larger than estimates of global soil respiration. We report the spatial distribution of SOC stocks per 0.5 arc minutes, the areal masses of SOC and the quantiles of SOC stocks by continents, wetland types, and permafrost types. Depending on the definition of "wetland", wetland soils contain between 82 and 158 Pg SOC. Incorporating more detailed estimates for permafrost from the Northern Circumpolar Soil Carbon Data Base (496 Pg SOC) and tropical peatland carbon, global soils contain 1324 Pg SOC in the upper 1 m including 421 Pg in tropical soils, whereof 40 Pg occur in tropical wetlands. Global SOC amounts to just under 3000 Pg when estimates for deeper soil layers are included. Variability in estimates is due to variation in definitions of soil units, differences in soil property databases, scarcity of information about soil carbon at depths > 1 m in peatlands, and variation in definitions of "peatland".

Seeing the soil through the net: an eye-opener on the soil map of the Flemish region (Belgium)

NASA Astrophysics Data System (ADS)

Dondeyne, Stefaan; Vanierschot, Laura; Langohr, Roger; Van Ranst, Eric; Deckers, Jozef; Oorts, Katrien

2017-04-01

A systematic soil survey of Belgium was conducted from 1948 to 1991. Field surveys were done at the detailed scale of 1:5000 with the final maps published at a 1:20,000 scale. The legend of these detailed soil maps (scale 1:20,000) has been converted to the 3rd edition of the international soil classification system 'World Reference Base for Soil Resources' (WRB). Over the last years, the government of the Flemish region made great efforts to make these maps, along with other environmental data, available to the general audience through the internet. The soil maps are widely used and consulted by researchers, teachers, land-use planners, environmental consultancy agencies and archaeologists. The maps can be downloaded and consulted in the viewer 'Visual Soil Explorer' ('Bodemverkenner'). To increase the legibility of the maps, we assembled a collection of photographs from soil profiles representing 923 soil types and 413 photos of related landscape settings. By clicking on a specific location in the 'Visual Soil Explorer', pictures of the corresponding soil type and landscape appear in a pop-up window, with a brief explanation about the soil properties. The collection of photographs of soil profiles cover almost 80% of the total area of the Flemish region, and include the 100 most common soil types. Our own teaching experience shows that these information layers are particular valuable for teaching soil geography and earth sciences in general. Overall, such visual information layers should contribute to a better interpretation of the soil maps and legacy soil data by serving as an eye-opener on the soil map to the wider community.

Land surface hydrology parameterization for atmospheric general circulation models including subgrid scale spatial variability

NASA Technical Reports Server (NTRS)

Entekhabi, D.; Eagleson, P. S.

1989-01-01

Parameterizations are developed for the representation of subgrid hydrologic processes in atmospheric general circulation models. Reasonable a priori probability density functions of the spatial variability of soil moisture and of precipitation are introduced. These are used in conjunction with the deterministic equations describing basic soil moisture physics to derive expressions for the hydrologic processes that include subgrid scale variation in parameters. The major model sensitivities to soil type and to climatic forcing are explored.

Spatial distribution of soil properties on a landslide in Taiwan: effects of movement types and vegetation

NASA Astrophysics Data System (ADS)

Lee, Pei-Chen; Cheng, Chih-Hsin

2017-04-01

Landslides are critical natural disturbances in tropical and temperate areas and exert immense impacts on forest ecosystems and soil properties. The impacts of landslides on soil properties not only vary with their movement type, scale, or location but also have great spatial variation inside landslide. In this study, the effects of movement type (erosion and deposition) and succeeding vegetation on soil properties inside a landslide scar were evaluated. The study site was located in Chiufenernshan, central Taiwan. The landslide was triggered by the Chi-Chi Earthquake (Ritch magnitude 7.3) in 1999. A huge amount of waste debris (30 million m3) was moved along the sliding slope (with a tipping degree at 26o) and deposited in the lower parts. Total area size of landslide scar was 200 ha and about 30 - 50 m depth waste material was eroded/deposited in the upper/lower scar areas. After 17 years, the succeeding vegetation varied inside landslide scar. The erosion areas were covered with grass (Miscanthus floridulus) or left barren in some slopes. In contrast, a secondary forest, dominated with Trema orientalis, Lithocarpus konishii, Mallotus paniculatus, and Smilax bracteata, developed in the deposition areas. We collected soil samples in different landscape areas including (i) erosion areas without vegetation, (ii) erosion areas with grass vegetation, (iii) deposition areas, and (iv) adjacent undisturbed areas. Our results indicated that the erosion areas had higher bulk density, rock fragment and pH value, but less soil organic carbon, total nitrogen, total phosphorus and N-mineralization rate than both deposition and adjacent undisturbed areas. The soil properties without vegetation even showed the extreme end compared to the soils with grass vegetation. Soils at the deposition zone had similar rock fragment, bulk density, soil pH, soil organic carbon and N-mineralization rate values to the undisturbed site (p > 0.05). We speculate that movement types could determine the initial establishment of vegetation types and then influence soil properties under vegetation succession. Therefore, both waste movement types and vegetation and their interactions play important roles on soil properties.

Ensemble learning for spatial interpolation of soil potassium content based on environmental information.

PubMed

Liu, Wei; Du, Peijun; Wang, Dongchen

2015-01-01

One important method to obtain the continuous surfaces of soil properties from point samples is spatial interpolation. In this paper, we propose a method that combines ensemble learning with ancillary environmental information for improved interpolation of soil properties (hereafter, EL-SP). First, we calculated the trend value for soil potassium contents at the Qinghai Lake region in China based on measured values. Then, based on soil types, geology types, land use types, and slope data, the remaining residual was simulated with the ensemble learning model. Next, the EL-SP method was applied to interpolate soil potassium contents at the study site. To evaluate the utility of the EL-SP method, we compared its performance with other interpolation methods including universal kriging, inverse distance weighting, ordinary kriging, and ordinary kriging combined geographic information. Results show that EL-SP had a lower mean absolute error and root mean square error than the data produced by the other models tested in this paper. Notably, the EL-SP maps can describe more locally detailed information and more accurate spatial patterns for soil potassium content than the other methods because of the combined use of different types of environmental information; these maps are capable of showing abrupt boundary information for soil potassium content. Furthermore, the EL-SP method not only reduces prediction errors, but it also compliments other environmental information, which makes the spatial interpolation of soil potassium content more reasonable and useful.

The stability of clay using mount Sinabung ash with unconfined compression test (uct) value

NASA Astrophysics Data System (ADS)

Puji Hastuty, Ika; Roesyanto; Hutauruk, Ronny; Simanjuntak, Oberlyn

2018-03-01

The soil has a important role as a highway’s embankment material (sub grade). Soil conditions are very different in each location because the scientifically soil is a very complex and varied material and the located on the field is very loose or very soft, so it is not suitable for construction, then the soil should be stabilized. The additive material commonly used for soil stabilization includes cement, lime, fly ash, rice husk ash, and others. This experiment is using the addition of volcanic ash. The purpose of this study was to determine the Index Properties and Compressive Strength maximum value with Unconfined Compression Test due to the addition of volcanic ash as a stabilizing agent along with optimum levels of the addition. The result showed that the original soil sample has Water Content of 14.52%; the Specific Weight of 2.64%; Liquid limit of 48.64% and Plasticity Index of 29.82%. Then, the Compressive Strength value is 1.40 kg/cm2. According to USCS classification, the soil samples categorized as the (CL) type while based on AASHTO classification, the soil samples are including as the type of A-7-6. After the soil is stabilized with a variety of volcanic ash, can be concluded that the maximum value occurs at mixture variation of 11% Volcanic Ash with Unconfined Compressive Strength value of 2.32 kg/cm2.

[Soil meso- and micro-fauna community structures in different urban forest types in Shanghai, China.

PubMed

Jin, Shi Ke; Wang, Juan Juan; Zhu, Sha; Zhang, Qi; Li, Xiang; Zheng, Wen Jing; You, Wen Hui

2016-07-01

Soil meso- and micro-fauna of four urban forest types in Shanghai were investigated in four months which include April 2014, July 2014, October 2014 and January 2015. A total of 2190 soil fauna individuals which belong to 6 phyla, 15 classes and 22 groups were collected. The dominant groups were Nematoda and Arcari, accounting for 56.0% and 21.8% of the total in terms of individual numbers respectively. The common groups were Enchytraeidae, Rotatoria, Collembola and Hymenoptera and they accounted for 18.7% of the total in terms of individual numbers. There was a significant difference (P<0.05) among soil meso- and micro-fauna density in the four urban forest types and the largest density was found in Metasequoia glyptostroboides forest, the smallest in Cinnamomum camphora forest. The largest groupe number was found in near-nature forest, the smallest was found in M. glyptostroboides forest. There was obvious seasonal dynamics in each urban forest type and green space which had larger density in autumn and larger groupe number in summer and autumn. In soil profiles, the degree of surface accumulation of soil meso- and micro-fauna in C. camphora forest was higher than in other forests and the vertical distribution of soil meso- and micro-fauna in near-nature forest was relatively homogeneous in four layers. Density-group index was ranked as: near-nature forest (6.953)> C. camphora forest (6.351)> Platanus forest (6.313)>M. glyptostroboides forest (5.910). The community diversity of soil fauna in each vegetation type could be displayed preferably by this index. It could be inferred through redundancy analysis (RDA) that the soil bulk density, organic matter and total nitrogen were the main environmental factors influencing soil meso- and micro-fauna community structure in urban forest. The positive correlations occurred between the individual number of Arcari, Enchytraeidae and soil organic matter and total nitrogen, as well as between the individual number of Diptera larvae, Rotatoria and soil water content.

How grazing affects soil quality of soils formed in the glaciated northeastern United States.

PubMed

Cox, Alissa H; Amador, José A

2018-02-21

Historically, much of the New England landscape was converted to pasture for grazing animals and harvesting hay. Both consumer demand for local sustainably produced food, and the number of small farms is increasing in RI, highlighting the importance of characterizing the effects livestock have on the quality of pasture soils. To assess how livestock affect pasture on Charlton and Canton soils series in RI, we examined soil quality in farms raising beef cattle (Bos taurus), sheep (Ovis aries), and horses (Equus ferus caballus), using hayed pastures as a control. We sampled three pastures per livestock type and three control hayed pastures in May, August, and October 2012. Hay fields and pastures grazed by sheep had statistically significant (P < 0.001) better soil quality than pastures grazed by beef cattle or horses. This was driven by parameters including penetration resistance, bulk density, aggregate stability, and infiltration rate. Hayfields also showed higher soil quality measures than grazed pastures for organic matter content and active C. In addition, significant differences in nitrate and phosphate concentrations were observed among livestock types. Respiration and infiltration rates, pH, and ammonium concentrations, on the other hand, did not differ significantly among pasture types. When all soil quality indicators in this study were weighed equally, soil quality scores followed the order: hay > sheep > beef cattle > horses. The results of our study provide baseline data on the effect different types of livestock have on pasture soil quality in RI, which may be useful in making sound land use and agricultural management decisions.

Diversity of Cultivable Methane-Oxidizing Bacteria in Microsites of a Rice Paddy Field: Investigation by Cultivation Method and Fluorescence in situ Hybridization (FISH)

PubMed Central

Dianou, Dayéri; Ueno, Chihoko; Ogiso, Takuya; Kimura, Makoto; Asakawa, Susumu

2012-01-01

The diversity of cultivable methane-oxidizing bacteria (MOB) in the rice paddy field ecosystem was investigated by combined culture-dependent and fluorescence in situ hybridization (FISH) techniques. Seven microsites of a Japanese rice paddy field were the focus of the study: floodwater, surface soil, bulk soil, rhizosphere soil, root, basal stem of rice plant, and rice stumps of previous harvest. Based on pmoA gene analysis and transmission electron microscopy (TEM), four type I, and nine type II MOB isolates were obtained from the highest dilution series of enrichment cultures. The type I MOB isolates included a novel species in the genus Methylomonas from floodwater and this is the first type I MOB strain isolated from floodwater of a rice paddy field. In the type I MOB, two isolates from stumps were closely related to Methylomonas spp.; one isolate obtained from rhizosphere soil was most related to Methyloccocus-Methylocaldum-Methylogaea clade. Almost all the type II MOB isolates were related to Methylocystis methanotrophs. FISH confirmed the presence of both types I and II MOB in all the microsites and in the related enrichment cultures. The study reported, for the first time, the diversity of cultivable methanotrophs including a novel species of type I MOB in rice paddy field compartments. Refining growth media and culture conditions, in combination with molecular approaches, will allow us to broaden our knowledge on the MOB community in the rice paddy field ecosystem and consequently to implement strategies for mitigating CH4 emission from this ecosystem. PMID:22446309

A Brief History of the use of Electromagnetic Induction Techniques in Soil Survey

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Doolittle, James

2017-04-01

Electromagnetic induction (EMI) has been used to characterize the spatial variability of soil properties since the late 1970s. Initially used to assess soil salinity, the use of EMI in soil studies has expanded to include: mapping soil types; characterizing soil water content and flow patterns; assessing variations in soil texture, compaction, organic matter content, and pH; and determining the depth to subsurface horizons, stratigraphic layers or bedrock, among other uses. In all cases the soil property being investigated must influence soil apparent electrical conductivity (ECa) either directly or indirectly for EMI techniques to be effective. An increasing number and diversity of EMI sensors have been developed in response to users' needs and the availability of allied technologies, which have greatly improved the functionality of these tools and increased the amount and types of data that can be gathered with a single pass. EMI investigations provide several benefits for soil studies. The large amount of georeferenced data that can be rapidly and inexpensively collected with EMI provides more complete characterization of the spatial variations in soil properties than traditional sampling techniques. In addition, compared to traditional soil survey methods, EMI can more effectively characterize diffuse soil boundaries and identify included areas of dissimilar soils within mapped soil units, giving soil scientists greater confidence when collecting spatial soil information. EMI techniques do have limitations; results are site-specific and can vary depending on the complex interactions among multiple and variable soil properties. Despite this, EMI techniques are increasingly being used to investigate the spatial variability of soil properties at field and landscape scales. The future should witness a greater use of multiple-frequency and multiple-coil EMI sensors and integration with other sensors to assess the spatial variability of soil properties. Data analysis will be improved with advanced processing and presentation systems and more sophisticated geostatistical modeling algorithms will be developed and used to interpolate EMI data, improve the resolution of subsurface features, and assess soil properties.

Soil properties discriminating Araucaria forests with different disturbance levels.

PubMed

Bertini, Simone Cristina Braga; Azevedo, Lucas Carvalho Basilio; Stromberger, Mary E; Cardoso, Elke Jurandy Bran Nogueira

2015-04-01

Soil biological, chemical, and physical properties can be important for monitoring soil quality under one of the most spectacular vegetation formation on Atlantic Forest Biome, the Araucaria Forest. Our aim was to identify a set of soil variables capable of discriminating between disturbed, reforested, and native Araucaria forest soils such that these variables could be used to monitor forest recovery and maintenance. Soil samples were collected at dry and rainy season under the three forest types in two state parks at São Paulo State, Brazil. Soil biological, chemical, and physical properties were evaluated to verify their potential to differentiate the forest types, and discriminant analysis was performed to identify the variables that most contribute to the differentiation. Most of physical and chemical variables were sensitive to forest disturbance level, but few biological variables were significantly different when comparing native, reforested, and disturbed forests. Despite more than 20 years following reforestation, the reforested soils were chemically and biologically distinct from native and disturbed forest soils, mainly because of the greater acidity and Al3+ content of reforested soil. Disturbed soils, in contrast, were coarser in texture and contained greater concentrations of extractable P. Although biological properties are generally highly sensitive to disturbance and amelioration efforts, the most important soil variables to discriminate forest types in both seasons included Al3+, Mg2+, P, and sand, and only one microbial attribute: the NO2- oxidizers. Therefore, these five variables were the best candidates, of the variables we employed, for monitoring Araucaria forest disturbance and recovery.

Root Water Uptake and Soil Moisture Pattern Dynamics - Capturing Connections, Controls and Causalities

NASA Astrophysics Data System (ADS)

Blume, T.; Heidbuechel, I.; Hassler, S. K.; Simard, S.; Guntner, A.; Stewart, R. D.; Weiler, M.

2015-12-01

We hypothesize that there is a shift in controls on landscape scale soil moisture patterns when plants become active during the growing season. Especially during the summer soil moisture patterns are not only controlled by soils, topography and related abiotic site characteristics but also by root water uptake. Root water uptake influences soil moisture patterns both in the lateral and vertical direction. Plant water uptake from different soil depths is estimated based on diurnal fluctuations in soil moisture content and was investigated with a unique setup of 46 field sites in Luxemburg and 15 field sites in Germany. These sites cover a range of geologies, soils, topographic positions and types of vegetation. Vegetation types include pasture, pine forest (young and old) and different deciduous forest stands. Available data at all sites includes information at high temporal resolution from 3-5 soil moisture and soil temperature profiles, matrix potential, piezometers and sapflow sensors as well as standard climate data. At sites with access to a stream, discharge or water level is also recorded. The analysis of soil moisture patterns over time indicates a shift in regime depending on season. Depth profiles of root water uptake show strong differences between different forest stands, with maximum depths ranging between 50 and 200 cm. Temporal dynamics of signal strength within the profile furthermore suggest a locally shifting spatial distribution of root water uptake depending on water availability. We will investigate temporal thresholds (under which conditions spatial patterns of root water uptake become most distinct) as well as landscape controls on soil moisture and root water uptake dynamics.

Soil- and crop-dependent variation in correlation lag between precipitation and agricultural drought indices as predicted by the SWAP model

NASA Astrophysics Data System (ADS)

Wright, Azin; Cloke, Hannah; Verhoef, Anne

2017-04-01

Droughts have a devastating impact on agriculture and economy. The risk of more frequent and more severe droughts is increasing due to global warming and certain anthropogenic activities. At the same time, the global population continues to rise and the need for sustainable food production is becoming more and more pressing. In light of this, drought prediction can be of great value; in the context of early warning, preparedness and mitigation of drought impacts. Prediction of meteorological drought is associated with uncertainties around precipitation variability. As meteorological drought propagates, it can transform into agricultural drought. Determination of the maximum correlation lag between precipitation and agricultural drought indices can be useful for prediction of agricultural drought. However, the influence of soil and crop type on the lag needs to be considered, which we explored using a 1-D Soil-Vegetation-Atmosphere-Transfer model (SWAP (http://www.swap.alterra.nl/), with the following configurations, all forced with ERA-Interim weather data (1979 to 2014): i) different crop types in the UK; ii) three generic soil types (clay, loam and sand) were considered. A Sobol sensitivity analysis was carried out (perturbing the SWAP model van Genuchten soil hydraulic parameters) to study the effect of soil type uncertainty on the water balance variables. Based on the sensitivity analysis results, a few variations of each soil type were selected. Agricultural drought indices including Soil Moisture Deficit Index (SMDI) and Evapotranspiration Deficit Index (ETDI) were calculated. The maximum correlation lag between precipitation and these drought indices was calculated, and analysed in the context of crop and soil model parameters. The findings of this research can be useful to UK farming, by guiding government bodies such as the Environment Agency when issuing drought warnings and implementing drought measures.

Simulation of changes in heavy metal contamination in farmland soils of a typical manufacturing center through logistic-based cellular automata modeling.

PubMed

Qiu, Menglong; Wang, Qi; Li, Fangbai; Chen, Junjian; Yang, Guoyi; Liu, Liming

2016-01-01

A customized logistic-based cellular automata (CA) model was developed to simulate changes in heavy metal contamination (HMC) in farmland soils of Dongguan, a manufacturing center in Southern China, and to discover the relationship between HMC and related explanatory variables (continuous and categorical). The model was calibrated through the simulation and validation of HMC in 2012. Thereafter, the model was implemented for the scenario simulation of development alternatives for HMC in 2022. The HMC in 2002 and 2012 was determined through soil tests and cokriging. Continuous variables were divided into two groups by odds ratios. Positive variables (odds ratios >1) included the Nemerow synthetic pollution index in 2002, linear drainage density, distance from the city center, distance from the railway, slope, and secondary industrial output per unit of land. Negative variables (odds ratios <1) included elevation, distance from the road, distance from the key polluting enterprises, distance from the town center, soil pH, and distance from bodies of water. Categorical variables, including soil type, parent material type, organic content grade, and land use type, also significantly influenced HMC according to Wald statistics. The relative operating characteristic and kappa coefficients were 0.91 and 0.64, respectively, which proved the validity and accuracy of the model. The scenario simulation shows that the government should not only implement stricter environmental regulation but also strengthen the remediation of the current polluted area to effectively mitigate HMC.

Worldwide Organic Soil Carbon and Nitrogen Data (1986) (NDP-018)

DOE Data Explorer

Zinke, P. J. [Univ. of California, Berkeley, CA (United States); Stangenberger, A. G. [Univ. of California, Berkeley, CA (United States); Post, W. M. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Emanuel, W. R. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Olson, J. S. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Millemann, R. E. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States); Boden, T. A. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

1986-01-01

This data base was begun with the collection and analysis of soil samples from California. Additional data came from soil surveys of Italy, Greece, Iran, Thailand, Vietnam, various tropical Amazonian areas, and U.S. forests and from the soil-survey literature. The analyzed samples were collected at uniform soil-depth increments and included bulk-density determinations. The data on each sample are soil profile number; soil profile carbon content; soil profile nitrogen content; sampling site latitude and longitude; site elevation; profile literature reference source; and soil profile codes for Holdridge life zone, Olson ecosystem type, and parent material. These data may be used to estimate the size of the soil organic carbon and nitrogen pools at equilibrium with natural soil-forming factors.

Physical properties of 134 soils in six northeastern states

Treesearch

A. R. Eschner; B. O. Jones; R. C. Moyle

1957-01-01

From June 1954 to July 1955 the Vicksburg Infiltration Project collected and analyzed samples from 134 sites in six Northeastern States; the samples included 79 soil series and 114 soil types. This work was done to supply the U. S. Army with information needed for specialized research on military traffic ability. The basic data are herein presented because of their...

Soil Nutrient Assessment for Urban Ecosystems in Hubei, China

PubMed Central

Li, Zhi-guo; Zhang, Guo-shi; Liu, Yi; Wan, Kai-yuan; Zhang, Run-hua; Chen, Fang

2013-01-01

Recent urban landscape vegetation surveys conducted in many cities in China identified numerous plant nutrient deficiencies, especially in newly developed cities. Soil nutrients and soil nutrient management in the cities of Hubei province have not received adequate attention to date. The aims of this study were to characterize the available nutrients of urban soils from nine cities in Hubei province, China, and to assess how soil nutrient status is related to land use type and topography. Soil nutrients were measured in 405 sites from 1,215 soil samples collected from four land use types (park, institutional [including government building grounds, municipal party grounds, university grounds, and garden city institutes], residential, and roadside verges) and three topographies (mountainous [142–425 m a.s.l], hilly [66–112 m a.s.l], and plain [26–30 m a.s.l]). Chemical analyses showed that urban soils in Hubei had high pH and lower soil organic matter, available nitrogen (N), available phosphorus (P), and available boron (B) concentrations than natural soils. Nutrient concentrations were significantly different among land use types, with the roadside and residential areas having greater concentrations of calcium (Ca), sulfur (S), copper (Cu), manganese (Mn), and zinc (Zn) that were not deficient against the recommended ranges. Topographic comparisons showed statistically significant effects for 8 of the 11 chemical variables (p < 0.05). Concentrations of N, Ca, Mg, S, Cu, and Mn in plain cities were greater than those in mountainous cities and show a negative correlation with city elevation. These results provide data on urban soils characteristics in land use types and topography, and deliver significant information for city planners and policy makers. PMID:24086647

Soil nutrient assessment for urban ecosystems in Hubei, China.

PubMed

Li, Zhi-Guo; Zhang, Guo-Shi; Liu, Yi; Wan, Kai-Yuan; Zhang, Run-Hua; Chen, Fang

2013-01-01

Recent urban landscape vegetation surveys conducted in many cities in China identified numerous plant nutrient deficiencies, especially in newly developed cities. Soil nutrients and soil nutrient management in the cities of Hubei province have not received adequate attention to date. The aims of this study were to characterize the available nutrients of urban soils from nine cities in Hubei province, China, and to assess how soil nutrient status is related to land use type and topography. Soil nutrients were measured in 405 sites from 1,215 soil samples collected from four land use types (park, institutional [including government building grounds, municipal party grounds, university grounds, and garden city institutes], residential, and roadside verges) and three topographies (mountainous [142-425 m a.s.l], hilly [66-112 m a.s.l], and plain [26-30 m a.s.l]). Chemical analyses showed that urban soils in Hubei had high pH and lower soil organic matter, available nitrogen (N), available phosphorus (P), and available boron (B) concentrations than natural soils. Nutrient concentrations were significantly different among land use types, with the roadside and residential areas having greater concentrations of calcium (Ca), sulfur (S), copper (Cu), manganese (Mn), and zinc (Zn) that were not deficient against the recommended ranges. Topographic comparisons showed statistically significant effects for 8 of the 11 chemical variables (p < 0.05). Concentrations of N, Ca, Mg, S, Cu, and Mn in plain cities were greater than those in mountainous cities and show a negative correlation with city elevation. These results provide data on urban soils characteristics in land use types and topography, and deliver significant information for city planners and policy makers.

Highly Diverse Endophytic and Soil Fusarium oxysporum Populations Associated with Field-Grown Tomato Plants

PubMed Central

Demers, Jill E.; Gugino, Beth K.

2014-01-01

The diversity and genetic differentiation of populations of Fusarium oxysporum associated with tomato fields, both endophytes obtained from tomato plants and isolates obtained from soil surrounding the sampled plants, were investigated. A total of 609 isolates of F. oxysporum were obtained, 295 isolates from a total of 32 asymptomatic tomato plants in two fields and 314 isolates from eight soil cores sampled from the area surrounding the plants. Included in this total were 112 isolates from the stems of all 32 plants, a niche that has not been previously included in F. oxysporum population genetics studies. Isolates were characterized using the DNA sequence of the translation elongation factor 1α gene. A diverse population of 26 sequence types was found, although two sequence types represented nearly two-thirds of the isolates studied. The sequence types were placed in different phylogenetic clades within F. oxysporum, and endophytic isolates were not monophyletic. Multiple sequence types were found in all plants, with an average of 4.2 per plant. The population compositions differed between the two fields but not between soil samples within each field. A certain degree of differentiation was observed between populations associated with different tomato cultivars, suggesting that the host genotype may affect the composition of plant-associated F. oxysporum populations. No clear patterns of genetic differentiation were observed between endophyte populations and soil populations, suggesting a lack of specialization of endophytic isolates. PMID:25304514

[Three dimensional fluorescent characteristics of soil dissolved organic matter (DOM) in Jiaozhou Bay coastal wetlands, China].

PubMed

Zi, Yuan Yuan; Kong, Fan Long; Xi, Min; Li, Yue; Yang, Ling

2016-12-01

In order to elucidate the structure characteristics of soil dissolved organic matter (DOM) and analyze the sources in Jiaozhou Bay coastal wetlands, four typical types of wetlands around Jiaozhou Bay were chosen, including Spartina anglica wetland, the barren wetland, Suaeda glauca wetland and Phragmites australis wetland. The soil samples were collected in January 2014. The contents of soil DOM were determined and the spectral analysis was made by three-dimensional fluorescent technology. The results showed that the contents of soil dissolved organic carbon (DOC) in four types of wetlands all decreased with the increasing soil depth, and S. anglica wetland ranked the first in the contents of soil DOC, followed by the barren wetland, S. glauca wetland and P. australis wetland. Five fluorescence peaks including B, T, A, D and C were found in the three-dimensional fluorescence spectrum (3DEEMs), indicating tyrosine-like, tryptophan-like, phenol-like, soluble microbial byproduct-like and humic acid-like- substances, respectively. Fluorescence integration (FRI) was applied in the qualitative analysis of five components. The results showed that tryptophan-like, phenol-like and tyrosine-like substances ranked in top three in content, followed by soluble microbial byproduct-like and humic acid-like substances which were not significantly different. Pearson correlation analysis demonstrated that a positive correlation existed between any two of the five components of DOM, and they were all positively related to DOC content. In addition, there existed different correlations between the five components of DOM and total phosphorus (TP), available phosphorus (AP) and total nitrogen (TN). The soil DOM in the four types of wetlands was mainly produced by biotic interactions, and the degree of humification was relatively low.

Bacterial chitinolytic communities respond to chitin and pH alteration in soil.

PubMed

Kielak, Anna M; Cretoiu, Mariana Silvia; Semenov, Alexander V; Sørensen, Søren J; van Elsas, Jan Dirk

2013-01-01

Chitin amendment is a promising soil management strategy that may enhance the suppressiveness of soil toward plant pathogens. However, we understand very little of the effects of added chitin, including the putative successions that take place in the degradative process. We performed an experiment in moderately acid soil in which the level of chitin, next to the pH, was altered. Examination of chitinase activities revealed fast responses to the added crude chitin, with peaks of enzymatic activity occurring on day 7. PCR-denaturing gradient gel electrophoresis (DGGE)-based analyses of 16S rRNA and chiA genes showed structural changes of the phylogenetically and functionally based bacterial communities following chitin addition and pH alteration. Pyrosequencing analysis indicated (i) that the diversity of chiA gene types in soil is enormous and (i) that different chiA gene types are selected by the addition of chitin at different prevailing soil pH values. Interestingly, a major role of Gram-negative bacteria versus a minor one of Actinobacteria in the immediate response to the added chitin (based on 16S rRNA gene abundance and chiA gene types) was indicated. The results of this study enhance our understanding of the response of the soil bacterial communities to chitin and are of use for both the understanding of soil suppressiveness and the possible mining of soil for novel enzymes.

Polycyclic Aromatic Hydrocarbons Content in Contaminated Forest Soils with Different Humus Types.

PubMed

Lasota, Jarosław; Błońska, Ewa

2018-01-01

The aim of the study was to determine polycyclic aromatic hydrocarbon (PAH) content in different forest humus types. The investigation was carried out in Chrzanów Forest District in southern Poland. Twenty research plots with different humus types (mor and mull) were selected. The samples for analysis were taken after litter horizons removing from a depth of 0-10 cm (from the Of- and Oh-horizon total or A-horizon). pH, organic carbon and total nitrogen content, base cations, acidity, and heavy metal content were determined. In the natural moisture state, the activity of dehydrogenase was determined. The study included the determination of PAH content. The conducted research confirms strong contamination of study soil by PAHs and heavy metals. Our experiment provided evidence that different forest humus types accumulate different PAH amounts. The highest content of PAHs and heavy metals was recorded in mor humus type. The content of PAHs in forest humus horizon depends on the content and quality of soil organic matter. Weaker degradation of hydrocarbons is associated with lower biological activity of soils. The mull humus type showed lower content of PAHs and at the same time the highest biological activity confirmed by high dehydrogenase activity.

Miocene Soil Database: Global paleosol and climate maps of the Middle Miocene Thermal Maximum

NASA Astrophysics Data System (ADS)

Metzger, C. A.

2013-12-01

Paleosols, which record past climatic, biologic, and atmospheric conditions, can be used as a proxy to understand ancient terrestrial landscapes, paleoclimate, and paleoenvironment. In addition, the middle Miocene thermal maximum (~16 Ma) provides an ancient analog for understanding the effects of current and future climate change on soil and ecosystem regimes, as it contains records of shifts similar in magnitude to expected global climate change. The Miocene Soil Database (MSDB) combines new paleosol data from Australia and Argentina with existing and previously uncollated paleosol data from the literature and the Paleobiology Database. These data (n = 507) were then used to derive a paleogeographic map of climatically significant soil types zones during the Middle Miocene. The location of each diagnostic paleosol type (Aridisol, Alfisol, Mollisol, Histosol, Oxisol, and Ultisol) was plotted and compared with the extent of these soil types in the modern environment. The middle Miocene soil map highlights the extension of tropical soils (Oxisols, Ultisols), accompanied by thermophilic flora and fauna, into northern and southern mid-latitudes. Peats, lignites, and Histosols of wetlands were also more abundant at higher latitudes, especially in the northern hemisphere, during the middle Miocene. The paleosol changes reflect that the Middle Miocene was a peak of global soil productivity and carbon sequestration, with replacement of unproductive Aridisols and Gelisols with more productive Oxisols, Alfisols, Mollisols and Histosols. With expansion to include additional data such as soil texture, moisture, or vegetation type, the MSDB has the potential to provide an important dataset for computer models of Miocene climate shifts as well as future land use considerations of soils in times of global change.

Effects of land preparation and artificial vegetation on soil moisture variation in a loess hilly catchment of China

NASA Astrophysics Data System (ADS)

Feng, Tianjiao; Wei, Wei; Chen, Liding; Yu, Yang

2017-04-01

In the dryland regions, soil moisture is the main factor to determine vegetation growth and ecosystem restoration. Land preparation and vegetation restoration are the principal means for improving soil water content(SWC). Thus, it is important to analyze the coupling role of these two means on soil moisture. In this study, soil moisture were monitored at a semi-arid loess hilly catchment of China, during the growing season of 2014 and 2015. Four different land preparation methods (level ditches, fish-scale pits, adverse grade tablelands and level benches)and vegetation types(Prunus armeniaca, Platycladus orientalis, Platycladus orientalis and Caragana microphylla) were included in the experimental design. Our results showed that: (1)Soil moisture content differed across land preparation types, which is higher for fish-scale pits and decreased in the order of level ditches and adverse grade tablelands.(2) Rainwater harvesting capacity of fish-scale pits is greater than adverse grade tablelands. However the water holding capacity is much higher at soils prepared with the adverse grade tablelands method than the ones prepared by fish-scale pits methods. (3) When land preparation method is similar, vegetation play a key role in soil moisture variation. For example, the mean soil moisture under a Platycladus orientalis field is 26.72% higher than a Pinus tabulaeformis field, with the same land preparation methods. (4)Soil moisture in deeper soil layers is more affected by changes in the vegetation cover while soil moisture in the shallower layers is more affected by the variation in the land preparation methods. Therefore, we suggest that vegetation types such as: Platycladus orientalisor as well as soil preparation methods such as level ditch and fish-scale pit are the most appropriate vegetation cover and land preparation methods for landscape restoration in semi-arid loess hilly area. This conclusion was made based on the vegetation type and land preparation with the best water-holding capacity.

[Soil N/P ratio distribution characteristics of alpine grassland ecosystem in Qinghai-Tibet Plateau].

PubMed

Wang, Jian-Lin; Zhong, Zhi-Ming; Wang, Zhong-Hong; Chen, Bao-Xiong; Zhang, Xian-Zhou; Shen, Zhen-Xi; Hu, Xing-Xiang; Dacizhuoga

2013-12-01

The distribution characteristics of soil N/P ratio in alpine grassland ecosystem of Qinghai-Tibet Plateau were surveyed by field investigation and laboratory analysis. Horizontally, soil N/ P ratio was generally higher in west and lower in east in a manner of staggered patch distribution, with higher N/P ratios mainly centralized in the hinterland of northern part of Tibet Plateau and in the lake basin area of the northern foot of Himalayas. Significant differences in soil N/P ratio were observed among grassland types and natural transects. Vertically, the distribution of N/P ratio along the soil profile from aboveground to underground among different grass types could be categorized into five patterns, including low-high-low-high, low-high-low, low-high, high-low-high-low, and high-low-high. The N/P ratio showed a significant positive correlation with soil bulk density at 0-20 cm depth, soil water content at 20-30 cm depth, contents of soil available K and total nitrogen, respectively. However, it showed significant negative correlation with soil bulk density at 20-30 cm depth, contents of soil available P and total P, respectively.

Denitrification potential of riparian soils in relation to multiscale spatial environmental factors: a case study of a typical watershed, China.

PubMed

Wei, Jianbing; Feng, Hao; Cheng, Quanguo; Gao, Shiqian; Liu, Haiyan

2017-02-01

The objective of this study was to test the hypothesis that environmental regulators of riparian zone soil denitrification potential differ according to spatial scale within a watershed; consequently, a second objective was to provide spatial strategies for conserving and restoring the purification function of runoff in riparian ecosystems. The results show that soil denitrification in riparian zones was more heterogeneous at the profile scale than at the cross-section and landscape scales. At the profile scale, biogeochemical factors (including soil total organic carbon, total nitrogen, and nitrate-nitrogen) were the major direct regulators of the spatial distribution of soil denitrification enzyme activity (DEA). At the cross-section scale, factors included distance from river bank and vegetation density, while landscape-scale factors, including topographic index, elevation, and land use types, indirectly regulated the spatial distribution of DEA. At the profile scale, soil DEA was greatest in the upper soil layers. At the cross-section scale, maximum soil DEA occurred in the mid-part of the riparian zone. At the landscape scale, soil DEA showed an increasing trend towards downstream sites, except for those in urbanized areas.

The potential roles of biological soil crusts in dryland hydrologic cycles

USGS Publications Warehouse

Belnap, J.

2006-01-01

Biological soil crusts (BSCs) are the dominant living cover in many drylands of the world. They possess many features that can influence different aspects of local hydrologic cycles, including soil porosity, absorptivity, roughness, aggregate stability, texture, pore formation, and water retention. The influence of biological soil crusts on these factors depends on their internal and external structure, which varies with climate, soil, and disturbance history. This paper presents the different types of biological soil crusts, discusses how crust type likely influences various aspects of the hydrologic cycle, and reviews what is known and not known about the influence of biological crusts on sediment production and water infiltration versus runoff in various drylands around the world. Most studies examining the effect of biological soil crusts on local hydrology are done by comparing undisturbed sites with those recently disturbed by the researchers. Unfortunately, this greatly complicates interpretation of the results. Applied disturbances alter many soil features such as soil texture, roughness, aggregate stability, physical crusting, porosity, and bulk density in ways that would not necessarily be the same if crusts were not naturally present. Combined, these studies show little agreement on how biological crusts affect water infiltration or runoff. However, when studies are separated by biological crust type and utilize naturally occurring differences among these types, results indicate that biological crusts in hyperarid regions reduce infiltration and increase runoff, have mixed effects in and regions, and increase infiltration and reduce runoff in semiarid cool and cold drylands. However, more studies are needed before broad generalizations can be made on how biological crusts affect infiltration and runoff. We especially need studies that control for sub-surface soil features such as bulk density, micro- and macropores, and biological crust structure. Unlike the mixed effects of biological crusts on infiltration and runoff among regions, almost all studies show that biological crusts reduce sediment production, regardless of crust or dryland type.

Plant/soil concentration ratios for paired field and garden crops, with emphasis on iodine and the role of soil adhesion.

PubMed

Sheppard, S C; Long, J M; Sanipelli, B

2010-12-01

In the effort to predict the risks associated with contaminated soils, considerable reliance is placed on plant/soil concentration ratio (CR) values measured at sites other than the contaminated site. This inevitably results in the need to extrapolate among the many soil and plant types. There are few studies that compare CR among plant types that encompass both field and garden crops. Here, CRs for 40 elements were measured for 25 crops from farm and garden sites chosen so the grain crops were in close proximity to the gardens. Special emphasis was placed on iodine (I) because data for this element are sparse. For many elements, there were consistent trends among CRs for the various crop types, with leafy crops > root crops ≥ fruit crops ≈ seed crops. Exceptions included CR values for As, K, Se and Zn which were highest in the seed crops. The correlation of CRs from one plant type to another was evident only when there was a wide range in soil concentrations. In comparing CRs between crop types, it became apparent that the relationships differed for the rare earth elements (REE), which also had very low CR values. The CRs for root and leafy crops of REE converged to a minimum value. This was attributed to soil adhesion, despite the samples being washed, and the average soil adhesion for root crops was 500 mg soil kg⁻¹ dry plant and for leafy crops was 5 g kg⁻¹. Across elements, the log CR was negatively correlated with log Kd (the soil solid/liquid partition coefficient), as expected. Although, this correlation is expected, measures of correlation coefficients suitable for stochastic risk assessment are not frequently reported. The results suggest that r ≈ -0.7 would be appropriate for risk assessment. Copyright © 2010 Elsevier Ltd. All rights reserved.

Risk factors for faecal sand excretion in Icelandic horses.

PubMed

Husted, L; Andersen, M S; Borggaard, O K; Houe, H; Olsen, S N

2005-07-01

Sandy soil is often mentioned as a risk factor in the development of sand-related gastrointestinal disease (SGID) in the horse. There are other variables, but few studies confirm any of these. To investigate soil type, pasture quality, feeding practice in the paddock, age, sex and body condition score as risk factors for sand intake in the horse. Faeces were collected from 211 Icelandic horses on 19 different studs in Denmark together with soil samples and other potential risk factors. Sand content in faeces determined by a sand sedimentation test was interpreted as evidence of sand intake. Soil types were identified by soil analysis and significance of the data was tested using logistic analysis. Of horses included in the study, 56.4% showed sand in the faeces and 5.7% had more than 5 mm sand as quantified by the rectal sleeve sedimentation test. Soil type had no significant effect when tested as main effect, but there was interaction between soil type and pasture quality. Significant interactions were also found between paddock feeding practice and pasture quality. To evaluate the risk of sand intake it is important to consider 3 variables: soil type, pasture quality and feeding practice. Pasture quality was identified as a risk factor of both short and long grass in combination with sandy soil, while clay soil had the lowest risk in these combinations. Feeding practice in the paddock revealed feeding directly on the ground to be a risk factor when there was short (1-5 cm) or no grass. Also, no feeding outdoors increased the risk on pastures with short grass, while this had no effect in paddocks with no grass. More than 50% of all horses investigated in this study had sand in the faeces. The identification of risk factors is an important step towards prevention of SGID. Further research is necessary to determine why some horses exhibit more than 5 mm sand in the sedimentation test and whether this is correlated with geophagic behaviour.

The potential roles of biological soil crusts in dryland hydrologic cycles

NASA Astrophysics Data System (ADS)

Belnap, Jayne

2006-10-01

Biological soil crusts (BSCs) are the dominant living cover in many drylands of the world. They possess many features that can influence different aspects of local hydrologic cycles, including soil porosity, absorptivity, roughness, aggregate stability, texture, pore formation, and water retention. The influence of biological soil crusts on these factors depends on their internal and external structure, which varies with climate, soil, and disturbance history. This paper presents the different types of biological soil crusts, discusses how crust type likely influences various aspects of the hydrologic cycle, and reviews what is known and not known about the influence of biological crusts on sediment production and water infiltration versus runoff in various drylands around the world. Most studies examining the effect of biological soil crusts on local hydrology are done by comparing undisturbed sites with those recently disturbed by the researchers. Unfortunately, this greatly complicates interpretation of the results. Applied disturbances alter many soil features such as soil texture, roughness, aggregate stability, physical crusting, porosity, and bulk density in ways that would not necessarily be the same if crusts were not naturally present. Combined, these studies show little agreement on how biological crusts affect water infiltration or runoff. However, when studies are separated by biological crust type and utilize naturally occurring differences among these types, results indicate that biological crusts in hyperarid regions reduce infiltration and increase runoff, have mixed effects in arid regions, and increase infiltration and reduce runoff in semiarid cool and cold drylands. However, more studies are needed before broad generalizations can be made on how biological crusts affect infiltration and runoff. We especially need studies that control for sub-surface soil features such as bulk density, micro- and macropores, and biological crust structure. Unlike the mixed effects of biological crusts on infiltration and runoff among regions, almost all studies show that biological crusts reduce sediment production, regardless of crust or dryland type.

Effect of soil type and soil management on soil physical, chemical and biological properties in commercial organic olive orchards in Southern Spain

NASA Astrophysics Data System (ADS)

Gomez, Jose Alfonso; Auxiliadora Soriano, Maria; Montes-Borrego, Miguel; Navas, Juan Antonio; Landa, Blanca B.

2014-05-01

One of the objectives of organic agriculture is to maintain and improve soil quality, while simultaneously producing an adequate yield. A key element in organic olive production is soil management, which properly implemented can optimize the use of rainfall water enhancing infiltration rates and controlling competition for soil water by weeds. There are different soil management strategies: eg. weed mowing (M), green manure with surface tillage in spring (T), or combination with animal grazing among the trees (G). That variability in soil management combined with the large variability in soil types on which organic olive trees are grown in Southern Spain, difficult the evaluation of the impact of different soil management on soil properties, and yield as well as its interpretation in terms of improvement of soil quality. This communications presents the results and analysis of soil physical, chemical and biological properties on 58 soils in Southern Spain during 2005 and 2006, and analyzed and evaluated in different studies since them. Those 58 soils were sampled in 46 certified commercial organic olive orchards with four soil types as well as 12 undisturbed areas with natural vegetation near the olive orchards. The four soil types considered were Eutric Regosol (RGeu, n= 16), Eutric Cambisol (CMeu, n=16), Calcaric Regosol (RGca, n=13 soils sampled) and Calcic Cambisol (CMcc), and the soil management systems (SMS) include were 10 light tillage (LT), 16 sheep grazing (G), 10 tillage (T), 10 mechanical mowing (M), and 12 undisturbed areas covered by natural vegetation (NV-C and NV-S). Our results indicate that soil management had a significant effect on olive yield as well as on key soil properties. Among these soil properties are physical ones, such as infiltration rate or bulk density, chemical ones, especially organic carbon concentration, and biological ones such as soil microbial respiration and bacterial community composition. Superimpose to that soil management induced variability, there was a strong interaction with soil type and climate conditions. There was also a relatively high variability within the same soil management and soil type class, indicating farm to farm variability in conditions and history of soil management. Based on this dataset two different approaches were taken to: A) evaluate the risk of soil degradation based on a limited set of soil properties, B) assess the effect of changes in SMS on soil biodiversity by using terminal restriction profiles (TRFs) derived from T-RFLP analysis of amplified 16S rDNA as. The results indicates the potential of both approaches to assess the risk of soil degradation (A) and the impact on soil biodiversity (B) upon appropriate benchmarking to characterize the interaction between soil management and soil type References Álvarez, S., Soriano, M.A., Landa, B.B., and Gómez, J.A. 2007. Soil properties in organic olive orchards compared with that in natural areas in a mountainous landscape in southern Spain. Soil Use Manage 23:404-416. Gómez, J.A., Álvarez, S., and Soriano, M.A. 2009. Development of a soil degradation assessment tool for organic olive groves in southern Spain. Catena 79:9-17. Landa, B.B., Montes-Borrego, M., Aranda, S., Soriano, M.A., Gómez, J.A., and Navas-Cortés, J.A. 2013. Soil factors involved in the diversity and structure of soil bacterial communities in commercial organic olive orchards in Southern Spain. Environmental Microbiology Reports (accepted) Soriano, M.A., Álvarez, S., Landa, B.B., and Gómez, J.A. 2013. Soil properties in organic olive orchards following different weed management in a rolling landscape of Andalusia, Spain. Renew Agr Food Syst (in press), doi:10.1017/S1742170512000361.

Ecogeomorphology of Spartina patens-dominated tidal marshes: Soil organic matter accumulation, marsh elevation dynamics, and disturbance

USGS Publications Warehouse

Cahoon, D.R.; Ford, M.A.; Hensel, P.F.; Fagherazzi, Sergio; Marani, Marco; Blum, Linda K.

2004-01-01

Marsh soil development and vertical accretion in Spartina patens (Aiton) Muhl.-dominated tidal marshes is largely dependent on soil organic matter accumulation from root-rhizome production and litter deposition. Yet there are few quantitative data sets on belowground production and the relationship between soil organic matter accumulation and soil elevation dynamics for this marsh type. Spartina patens marshes are subject to numerous stressors, including sea-level rise, water level manipulations (i.e., flooding and draining) by impoundments, and prescribed burning. These stressors could influence long-term marsh sustainability by their effect on root production, soil organic matter accumulation, and soil elevation dynamics. In this review, we summarize current knowledge on the interactions among vegetative production, soil organic matter accumulation and marsh elevation dynamics, or the ecogeomorphology, of Spartina patens-dominated tidal marshes. Additional studies are needed of belowground production/decomposition and soil elevation change (measured simultaneously) to better understand the links among soil organic matter accumulation, soil elevation change, and disturbance in this marsh type. From a management perspective, we need to better understand the impacts of disturbance stressors, both lethal and sub-lethal, and the interactive effect of multiple stressors on soil elevation dynamics in order to develop better management practices to safeguard marsh sustainability as sea level rises.

Dust emission and soil loss due to anthropogenic activities by wind erosion simulations

NASA Astrophysics Data System (ADS)

Katra, Itzhak; Swet, Nitzan; Tanner, Smadar

2017-04-01

Wind erosion is major process of soil loss and air pollution by dust emission of clays, nutrients, and microorganisms. Many soils throughout the world are currently or potentially associated with dust emissions, especially in dryland zones. The research focuses on wind erosion in semi-arid soils (Northern Negev, Israel) that are subjected to increased human activities of urban development and agriculture. A boundary-layer wind tunnel has been used to study dust emission and soil loss by simulation and quantification of high-resolution wind processes. Field experiments were conducted in various surface types of dry loess soils. The experimental plots represent soils with long-term and short term influences of land uses such as agriculture (conventional and organic practices), grazing, and natural preserves. The wind tunnel was operated under various wind velocities that are above the threshold velocity of aeolian erosion. Total soil sediment and particulate matter (PM) fluxes were calculated. Topsoil samples from the experimental plots were analysed in the laboratory for physical and chemical characteristics including aggregation, organic matter, and high-resolution particle size distribution. The results showed variations in dust emission in response to surface types and winds to provide quantitative estimates of soil loss over time. Substantial loss of particulate matter that is < 10 micrometer in diameter, including clays and nutrients, was recorded in most experimental conditions. Integrative analyses of the topsoil properties and dust experiment highlight the significant implications for soil nutrient resources and management strategies as well as for PM loading to the atmosphere and air pollution.

[Characteristics of soil microorganisms and soil nutrients in different sand-fixation shrub plantations in Kubuqi Desert, China].

PubMed

Zhang, Li-Xin; Duan, Yu Xi; Wang, Bo; Wang, Wei Feng; Li, Xiao Jing; Liu, Jin Jie

2017-12-01

Three types of sand-fixation shrub plantations, including Artemisia ordosica + Hedysarum fruticosum, Caragana korshinskii and Salix psammophila, were selected in the eastern area of Kubuqi Desert to study the changes in soil microbial biomass carbon (MBC) and microbial biomass nitrogen (MBN), quantities of soil microorganisms, contents of soil nutrients and the relations among these variables under the different plantation types and shifting sandy land. The restoration effects of each plantation type on soil quality were assessed by synthetic index method. The results showed that the contents of soil organic matter, total nitrogen and phosphorus, and available nitrogen and phosphorus under different plantations were all significantly greater than those under shifting sandy land, and the order of increase was A. ordosica + H. fruticosum ＞ C. korshinskii ＞ S. psammophila. The soil nutrient contents decreased with the increase of soil depth under all plantation types. The quantities of soil microorganisms and the contents of soil MBC and MBN under the plantations were higher at different degrees than those under shifting sandy land. MBC, MBN and the relative numbers of bacteria under A. ordosica+H. fruticosum plantation were higher than those under C. korshinskii plantation and S. psammophila plantation. The relative numbers of fungi and actinobacteria decreased in the order of C. korshinskii ＞ S. psammophila ＞ A. ordosica + H. fruticosum. The relative number of bacteria, MBC and MBN under the plantations were mainly affected by the contents of soil organic matter, total nitrogen, total phosphorus, available nitrogen, available phosphorus, as well as C/N, and the relative numbers of actinobacteria and fungi were primarily affected by the contents of soil total phosphorus, available nitrogen and available phosphorus. Soil quality was ranked in the order of A. ordosica + H. fruticosum ＞ C. korshinskii ＞ S. psammophila ＞ shifting sandy land. These results demonstrated that different sand-fixation shrub plantations could improve the quality of the desert soil and the A. ordosica + H. fruticosum plantation was the best for soil restoration and quality improvement in the desert.

Effects of Nutrient Enrichment on Microbial Communities and Carbon Cycling in Wetland Soils

NASA Astrophysics Data System (ADS)

Hartman, W.; Neubauer, S. C.; Richardson, C. J.

2013-12-01

Soil microbial communities are responsible for catalyzing biogeochemical transformations underlying critical wetland functions, including cycling of carbon (C) and nutrients, and emissions of greenhouse gasses (GHG). Alteration of nutrient availability in wetland soils may commonly occur as the result of anthropogenic impacts including runoff from human land uses in uplands, alteration of hydrology, and atmospheric deposition. However, the impacts of altered nutrient availability on microbial communities and carbon cycling in wetland soils are poorly understood. To assess these impacts, soil microbial communities and carbon cycling were determined in replicate experimental nutrient addition plots (control, +N, +P, +NP) across several wetland types, including pocosin peat bogs (NC), freshwater tidal marshes (GA), and tidal salt marshes (SC). Microbial communities were determined by pyrosequencing (Roche 454) extracted soil DNA, targeting both bacteria (16S rDNA) and fungi (LSU) at a depth of ca. 1000 sequences per plot. Wetland carbon cycling was evaluated using static chambers to determine soil GHG fluxes, and plant inclusion chambers were used to determine ecosystem C cycling. Soil bacterial communities responded to nutrient addition treatments in freshwater and tidal marshes, while fungal communities did not respond to treatments in any of our sites. We also compared microbial communities to continuous biogeochemical variables in soil, and found that bacterial community composition was correlated only with the content and availability of soil phosphorus, while fungi responded to phosphorus stoichiometry and soil pH. Surprisingly, we did not find a significant effect of our nutrient addition treatments on most metrics of carbon cycling. However, we did find that several metrics of soil carbon cycling appeared much more related to soil phosphorus than to nitrogen or soil carbon pools. Finally, while overall microbial community composition was weakly correlated with soil carbon cycling, our work did identify a small number of individual taxonomic groups that were more strongly correlated with soil CO2 flux. These results suggest that a small number of microbial groups may potentially serve as keystone taxa (and functional indicators), which simple community fingerprinting approaches may overlook. Our results also demonstrate strong effects of soil phosphorus availability on both microbial communities and soil carbon cycling, even in wetland types traditionally considered to be nitrogen limited.

Methane production potential and microbial community structure for different forest soils

NASA Astrophysics Data System (ADS)

Matsumoto, Y.; Ueyama, M.; Kominami, Y.; Endo, R.; Tokumoto, H.; Hirano, T.; Takagi, K.; Takahashi, Y.; Iwata, H.; Harazono, Y.

2017-12-01

Forest soils are often considered as a methane (CH4) sink, but anaerobic microsites potentially decrease the sink at the ecosystem scale. In this study, we measured biological CH4 production potential of soils at various ecosystems, including upland forests, a lowland forest, and a bog, and analyzed microbial community structure using 16S ribosomal RNA (rRNA) genes. Three different types of soil samples (upland, bank of the stream, and center of the stream) were collected from Yamashiro forest meteorology research site (YMS) at Kyoto, Japan, on 11 May 2017. The soils were incubated at dark and anaerobic conditions under three different temperatures (37°C, 25°C, and 10°C) from 9 June 2017. The upland soils emitted CH4 with largest yields among the three soils at 37°C and 25°C, although no CH4 emission was observed at 10°C. For all temperature ranges, the emission started to increase with a 14- to 20-days lag after the start of the incubation. The lag indicates a slow transition to anaerobic conditions; as dissolved oxygen in water decreased, the number and/or activity of anaerobic bacteria like methanogens increased. The soils at the bank and center of the stream emitted CH4 with smaller yields than the upland soils in the three temperature ranges. The microbial community analyses indicate that methanogenic archaea presented at the three soils including the aerobic upland soil, but compositions of methanogenic archaea were different among the soils. In upland soils, hydrogenotrophic methanogens, such as Methanobacterium and Methanothermobacter, consisted almost all of the total methanogen detected. In the bank and center of the stream, soils contained approximately 10-25% of acetoclastic methanogens, such as Methanosarcina and Methanosaeta, among the total methanogen detected. Methanotrophs, a genus of Methanobacteriaceae, was appeared in the all types of soils. We will present results from same incubation and 16S rRNA analyses for other ecosystems, including a larch forest on volcanic soils, a young larch forest on Gleyic Cambisol, and a boreal bog and a lowland forest on permafrost. Comparing various soils from temperate and boreal ecosystems, we will discuss differences of biogenic CH4 production potential among the soils with the microbial community analyses.

[Survival capacity of Corynebacterium pseudotuberculosis biovar ovis in different soil types from Chubut, Argentine Patagonia].

PubMed

Alvarez, Laura; William, Aillin; Castro, Isabel; Valenzuela, Fernanda; Estevao Belchior, Silvia

Corynebacterium pseudotuberculosis is transmitted among sheep in Argentine Patagonia causing pseudotuberculosis. The bacterium penetrates the skin or mucous membrane wounds, infecting the superficial lymph nodes and viscera. When surface abscesses are cut during shearing, they drain their purulent contents and contaminate tools and the soil. The objective of this work was to evaluate the survival capacity of C. pseudotuberculosis over time, in soils from the extra-Andean Patagonia region. Five types of superficial soils were collected from different areas in Chubut province (extra-Andean Patagonia), having distinctive physicochemical properties including organic matter content (very high to nonexistent), pH (neutral to strongly alkaline), electrical conductivity (saline to non-saline) and texture (sandy, clayey, silty loam). Different aliquots of each type of soil were inoculated with C. pseudotuberculosis PAT10 strain isolated from a Patagonian sheep, and were stored at room temperature. The number of surviving bacteria was determined at various times. Sixty percent (60%) of the inoculated C. pseudotuberculosis population survived for 80 to 210 days in soils with moderate to high organic matter content respectively. Silty soils favored bacterial survival, whereas the variables pH and salinity had no effect on survival. Copyright © 2016 Asociación Argentina de Microbiología. Publicado por Elsevier España, S.L.U. All rights reserved.

Extraction Techniques for Polycyclic Aromatic Hydrocarbons in Soils

PubMed Central

Lau, E. V.; Gan, S.; Ng, H. K.

2010-01-01

This paper aims to provide a review of the analytical extraction techniques for polycyclic aromatic hydrocarbons (PAHs) in soils. The extraction technologies described here include Soxhlet extraction, ultrasonic and mechanical agitation, accelerated solvent extraction, supercritical and subcritical fluid extraction, microwave-assisted extraction, solid phase extraction and microextraction, thermal desorption and flash pyrolysis, as well as fluidised-bed extraction. The influencing factors in the extraction of PAHs from soil such as temperature, type of solvent, soil moisture, and other soil characteristics are also discussed. The paper concludes with a review of the models used to describe the kinetics of PAH desorption from soils during solvent extraction. PMID:20396670

Spatial disaggregation of complex soil map units at regional scale based on soil-landscape relationships

NASA Astrophysics Data System (ADS)

Vincent, Sébastien; Lemercier, Blandine; Berthier, Lionel; Walter, Christian

2015-04-01

Accurate soil information over large extent is essential to manage agronomical and environmental issues. Where it exists, information on soil is often sparse or available at coarser resolution than required. Typically, the spatial distribution of soil at regional scale is represented as a set of polygons defining soil map units (SMU), each one describing several soil types not spatially delineated, and a semantic database describing these objects. Delineation of soil types within SMU, ie spatial disaggregation of SMU allows improved soil information's accuracy using legacy data. The aim of this study was to predict soil types by spatial disaggregation of SMU through a decision tree approach, considering expert knowledge on soil-landscape relationships embedded in soil databases. The DSMART (Disaggregation and Harmonization of Soil Map Units Through resampled Classification Trees) algorithm developed by Odgers et al. (2014) was used. It requires soil information, environmental covariates, and calibration samples, to build then extrapolate decision trees. To assign a soil type to a particular spatial position, a weighed random allocation approach is applied: each soil type in the SMU is weighted according to its assumed proportion of occurrence in the SMU. Thus soil-landscape relationships are not considered in the current version of DSMART. Expert rules on soil distribution considering the relief, parent material and wetlands location were proposed to drive the procedure of allocation of soil type to sampled positions, in order to integrate the soil-landscape relationships. Semantic information about spatial organization of soil types within SMU and exhaustive landscape descriptors were used. In the eastern part of Brittany (NW France), 171 soil types were described; their relative area in the SMU were estimated, geomorphological and geological contexts were recorded. The model predicted 144 soil types. An external validation was performed by comparing predicted with effectively observed soil types derived from available soil maps at scale of 1:25.000 or 1:50.000. Overall accuracies were 63.1% and 36.2%, respectively considering or not the adjacent pixels. The introduction of expert rules based on soil-landscape relationships to allocate soil types to calibration samples enhanced dramatically the results in comparison with a simple weighted random allocation procedure. It also enabled the production of a comprehensive soil map, retrieving expected spatial organization of soils. Estimation of soil properties for various depths is planned using disaggregated soil types, according to the GlobalSoilmap.net specifications. Odgers, N.P., Sun, W., McBratney, A.B., Minasny, B., Clifford, D., 2014. Disaggregating and harmonising soil map units through resampled classification trees. Geoderma 214, 91-100.

Test Operations Procedure (TOP) 1-1-062 Environmental Effects Data Collection

DTIC Science & Technology

2008-09-12

this procedure. 11. ESTIMATION DESCRIPTION The prime example of an empirically based model is the Universal Soil Loss Equation ( USLE ) developed...impacts to human health and welfare and to the natural environment. The type of data collected might include noise levels, soil erosion, and...uptake relevant to flora/fauna and the soil erosion effects of proposed testing. c. Plan to identify any modifications/alternatives implemented

Combined Effects of Soil Biotic and Abiotic Factors, Influenced by Sewage Sludge Incorporation, on the Incidence of Corn Stalk Rot

PubMed Central

Fortes, Nara Lúcia Perondi; Navas-Cortés, Juan A; Silva, Carlos Alberto; Bettiol, Wagner

2016-01-01

The objectives of this study were to evaluate the combined effects of soil biotic and abiotic factors on the incidence of Fusarium corn stalk rot, during four annual incorporations of two types of sewage sludge into soil in a 5-years field assay under tropical conditions and to predict the effects of these variables on the disease. For each type of sewage sludge, the following treatments were included: control with mineral fertilization recommended for corn; control without fertilization; sewage sludge based on the nitrogen concentration that provided the same amount of nitrogen as in the mineral fertilizer treatment; and sewage sludge that provided two, four and eight times the nitrogen concentration recommended for corn. Increasing dosages of both types of sewage sludge incorporated into soil resulted in increased corn stalk rot incidence, being negatively correlated with corn yield. A global analysis highlighted the effect of the year of the experiment, followed by the sewage sludge dosages. The type of sewage sludge did not affect the disease incidence. A multiple logistic model using a stepwise procedure was fitted based on the selection of a model that included the three explanatory parameters for disease incidence: electrical conductivity, magnesium and Fusarium population. In the selected model, the probability of higher disease incidence increased with an increase of these three explanatory parameters. When the explanatory parameters were compared, electrical conductivity presented a dominant effect and was the main variable to predict the probability distribution curves of Fusarium corn stalk rot, after sewage sludge application into the soil. PMID:27176597

Global distribution of soil organic carbon - Part 1: Masses and frequency distributions of SOC stocks for the tropics, permafrost regions, wetlands, and the world

NASA Astrophysics Data System (ADS)

Köchy, M.; Hiederer, R.; Freibauer, A.

2015-04-01

The global soil organic carbon (SOC) mass is relevant for the carbon cycle budget and thus atmospheric carbon concentrations. We review current estimates of SOC stocks and mass (stock × area) in wetlands, permafrost and tropical regions and the world in the upper 1 m of soil. The Harmonized World Soil Database (HWSD) v.1.2 provides one of the most recent and coherent global data sets of SOC, giving a total mass of 2476 Pg when using the original values for bulk density. Adjusting the HWSD's bulk density (BD) of soil high in organic carbon results in a mass of 1230 Pg, and additionally setting the BD of Histosols to 0.1 g cm-3 (typical of peat soils), results in a mass of 1062 Pg. The uncertainty in BD of Histosols alone introduces a range of -56 to +180 Pg C into the estimate of global SOC mass in the top 1 m, larger than estimates of global soil respiration. We report the spatial distribution of SOC stocks per 0.5 arcminutes; the areal masses of SOC; and the quantiles of SOC stocks by continents, wetland types, and permafrost types. Depending on the definition of "wetland", wetland soils contain between 82 and 158 Pg SOC. With more detailed estimates for permafrost from the Northern Circumpolar Soil Carbon Database (496 Pg SOC) and tropical peatland carbon incorporated, global soils contain 1325 Pg SOC in the upper 1 m, including 421 Pg in tropical soils, whereof 40 Pg occurs in tropical wetlands. Global SOC amounts to just under 3000 Pg when estimates for deeper soil layers are included. Variability in estimates is due to variation in definitions of soil units, differences in soil property databases, scarcity of information about soil carbon at depths > 1 m in peatlands, and variation in definitions of "peatland".

Acid-base properties of humic substances from composted and thermally-dried sewage sludges and amended soils as determined by potentiometric titration and the NICA-Donnan model.

PubMed

Fernández, José M; Plaza, César; Senesi, Nicola; Polo, Alfredo

2007-09-01

The acid-base properties of humic acids (HAs) and fulvic acids (FAs) isolated from composted sewage sludge (CS), thermally-dried sewage sludge (TS), soils amended with either CS or TS at a rate of 80 t ha(-1)y(-1) for 3y and the corresponding unamended soil were investigated by use of potentiometric titrations. The non-ideal competitive adsorption (NICA)-Donnan model for a bimodal distribution of proton binding sites was fitted to titration data by use of a least-squares minimization method. The main fitting parameters of the NICA-Donnan model obtained for each HA and FA sample included site densities, median affinity constants and widths of affinity distributions for proton binding to low and high affinity sites, which were assumed to be, respectively, carboxylic- and phenolic-type groups. With respect to unamended soil HA and FA, the HAs and FAs from CS, and especially TS, were characterized by smaller acidic functional group contents, larger proton binding affinities of both carboxylic- and phenolic-type groups, and smaller heterogeneity of carboxylic and phenolic-type groups. Amendment with CS or TS led to a decrease of acidic functional group contents and a slight increase of proton binding affinities of carboxylic- and phenolic-type groups of soil HAs and FAs. These effects were more evident in the HA and FA fractions from CS-amended soil than in those from TS-amended soil.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taylor, B.B.; Ripp, J.; Sims, R.C.

The Electric Power Research Institute (EPRI) is studying the environmental impact of preservatives associated with in-service utility poles. As part of this endeavor, two EPRI contractors, META Environmental, Inc. (META) and Atlantic Environmental Services, Inc. (Atlantic), have collected soil samples from around wood utility poles nationwide, for various chemical and physical analyses. This report covers the results for 107 pole sites in the US. These pole sites included a range of preservative types, soil types, wood types, pole sizes, and in-service ages. The poles in this study were preserved with one of two types of preservative: pentachlorophenol (PCP) or creosote.more » Approximately 40 to 50 soil samples were collected from each wood pole site in this study. The soil samples collected from the pole sites were analyzed for chlorinated phenols and total petroleum hydrocarbons (TPH) if the pole was preserved with PCP, or for polycyclic aromatic hydrocarbons (PAHs) if the pole was preserved with creosote. The soil samples were also analyzed for physical/chemical parameters, such as pH, total organic carbon (TOC), and cationic exchange capacity (CEC). Additional samples were used in studies to determine biological degradation rates, and soil-water distribution and retardation coefficients of PCP in site soils. Methods of analysis followed standard EPA and ASTM methods, with some modifications in the chemical analyses to enable the efficient processing of many samples with sufficiently low detection limits for this study. All chemical, physical, and site-specific data were stored in a relational computer database.« less

Jatropha curcas L. Root Structure and Growth in Diverse Soils

PubMed Central

Valdés-Rodríguez, Ofelia Andrea; Sánchez-Sánchez, Odilón; Pérez-Vázquez, Arturo; Caplan, Joshua S.; Danjon, Frédéric

2013-01-01

Unlike most biofuel species, Jatropha curcas has promise for use in marginal lands, but it may serve an additional role by stabilizing soils. We evaluated the growth and structural responsiveness of young J. curcas plants to diverse soil conditions. Soils included a sand, a sandy-loam, and a clay-loam from eastern Mexico. Growth and structural parameters were analyzed for shoots and roots, although the focus was the plasticity of the primary root system architecture (the taproot and four lateral roots). The sandy soil reduced the growth of both shoot and root systems significantly more than sandy-loam or clay-loam soils; there was particularly high plasticity in root and shoot thickness, as well as shoot length. However, the architecture of the primary root system did not vary with soil type; the departure of the primary root system from an index of perfect symmetry was 14 ± 5% (mean ± standard deviation). Although J. curcas developed more extensively in the sandy-loam and clay-loam soils than in sandy soil, it maintained a consistent root to shoot ratio and root system architecture across all types of soil. This strong genetic determination would make the species useful for soil stabilization purposes, even while being cultivated primarily for seed oil. PMID:23844412

Jatropha curcas L. root structure and growth in diverse soils.

PubMed

Valdés-Rodríguez, Ofelia Andrea; Sánchez-Sánchez, Odilón; Pérez-Vázquez, Arturo; Caplan, Joshua S; Danjon, Frédéric

2013-01-01

Unlike most biofuel species, Jatropha curcas has promise for use in marginal lands, but it may serve an additional role by stabilizing soils. We evaluated the growth and structural responsiveness of young J. curcas plants to diverse soil conditions. Soils included a sand, a sandy-loam, and a clay-loam from eastern Mexico. Growth and structural parameters were analyzed for shoots and roots, although the focus was the plasticity of the primary root system architecture (the taproot and four lateral roots). The sandy soil reduced the growth of both shoot and root systems significantly more than sandy-loam or clay-loam soils; there was particularly high plasticity in root and shoot thickness, as well as shoot length. However, the architecture of the primary root system did not vary with soil type; the departure of the primary root system from an index of perfect symmetry was 14 ± 5% (mean ± standard deviation). Although J. curcas developed more extensively in the sandy-loam and clay-loam soils than in sandy soil, it maintained a consistent root to shoot ratio and root system architecture across all types of soil. This strong genetic determination would make the species useful for soil stabilization purposes, even while being cultivated primarily for seed oil.

Self-organizing biochemical cycle in dynamic feedback with soil structure

NASA Astrophysics Data System (ADS)

Vasilyeva, Nadezda; Vladimirov, Artem; Smirnov, Alexander; Matveev, Sergey; Tyrtyshnikov, Evgeniy; Yudina, Anna; Milanovskiy, Evgeniy; Shein, Evgeniy

2016-04-01

In the present study we perform bifurcation analysis of a physically-based mathematical model of self-organized structures in soil (Vasilyeva et al., 2015). The state variables in this model included microbial biomass, two organic matter types, oxygen, carbon dioxide, water content and capillary pore size. According to our previous experimental studies, organic matter affinity to water is an important property affecting soil structure. Therefore, organic matter wettability was taken as principle distinction between organic matter types in this model. It considers general known biological feedbacks with soil physical properties formulated as a system of parabolic type non-linear partial differential equations with elements of discrete modeling for water and pore formation. The model shows complex behavior, involving emergence of temporal and spatial irregular auto-oscillations from initially homogeneous distributions. The energy of external impact on a system was defined by a constant oxygen level on the boundary. Non-linear as opposed to linear oxygen diffusion gives possibility of modeling anaerobic micro-zones formation (organic matter conservation mechanism). For the current study we also introduced population competition of three different types of microorganisms according to their mobility/feeding (diffusive, moving and fungal growth). The strongly non-linear system was solved and parameterized by time-optimized algorithm combining explicit and implicit (matrix form of Thomas algorithm) methods considering the time for execution of the evaluated time-step according to accuracy control. The integral flux of the CO2 state variable was used as a macroscopic parameter to describe system as a whole and validation was carried out on temperature series of moisture dependence for soil heterotrophic respiration data. Thus, soil heterotrophic respiration can be naturally modeled as an integral result of complex dynamics on microscale, arising from biological processes formulated as a sum of state variables products, with no need to introduce any saturation functions, such as Mikhaelis-Menten type kinetics, inside the model. Analyzed dynamic soil model is being further developed to describe soil structure formation and its effect on organic matter decomposition at macro-scale, to predict changes with external perturbations. To link micro- and macro-scales we additionally model soil particles aggregation process. The results from local biochemical soil organic matter cycle serve as inputs to aggregation process, while the output aggregate size distributions define physical properties in the soil profile, these in turn serve as dynamic parameters in local biochemical cycles. The additional formulation is a system of non-linear ordinary differential equations, including Smoluchowski-type equations for aggregation and reaction kinetics equations for coagulation/adsorption/adhesion processes. Vasilyeva N.A., Ingtem J.G., Silaev D.A. Nonlinear dynamical model of microbial growth in soil medium. Computational Mathematics and Modeling, vol. 49, p.31-44, 2015 (in Russian). English version is expected in corresponding vol.27, issue 2, 2016.

Contribution of species-specific chemical signatures to soil organic matter in Kohala, HI.

NASA Astrophysics Data System (ADS)

Stewart, C. E.; Amatangelo, K.; Neff, J. C.

2008-12-01

Soil organic matter (SOM) inherits much of its chemical structure from the dominant vegetation, including phenolic (lignin-derived), aromatic, and aliphatic (cutin and wax-derived) compounds. The Hawaiian fern species Dicranopteris decomposes more slowly than the angiosperm, Cheirodendron due to high concentrations of recalcitrant C compounds. These aliphatic fern leaf waxes are well-preserved and may comprise a large portion of the recalcitrant organic matter in these soils. Our objective was to determine the chemical signature of fern and angiosperm vegetation types and trace the preservation or loss of those compounds into the soil. We collected live tissue, litter, roots, and soil (<53 μm) from five dominant vegetation types including two angiosperms Cheirodendron and Metrosideros, two basal ferns Dicranopteris and Cibotium and a polypod fern Diplazium in Kohala, HI. We characterized them via TMAH-pyrolysis-gas chromatography-mass spectrometry. We found distinct chemical differences between angiosperm and fern vegetation; angiosperm contained more G- and S-derived lignin structures and the fern species contained greater relative abundances of P-derived lignin and tannin-derivatives. There was a general decrease of lignin-derived phenolic compounds from live to litter to soils and an increase in more recalcitrant, aromatic and aliphatic C. Recalcitrant fern-derived cutin and leaf waxes (alkene and alkanes structures) were evident in the soils, but clear species differences were not observed. Although ferns contain distinct lipid and wax-derived compounds, soils developed under fern do not appear to accumulate these compounds in SOM.

Spectral mixture modeling: Further analysis of rock and soil types at the Viking Lander sites

NASA Technical Reports Server (NTRS)

Adams, John B.; Smith, Milton O.

1987-01-01

A new image processing technique was applied to Viking Lander multispectral images. Spectral endmembers were defined that included soil, rock and shade. Mixtures of these endmembers were found to account for nearly all the spectral variance in a Viking Lander image.

Assessment of herbicide sorption by biochars and organic matter associated with soil and sediment

USDA-ARS?s Scientific Manuscript database

Sorption of two herbicides, fluridone (FLUN) and norflurazon (NORO), by whole sediment, two types of biochars and various soil/sediment organic matter (OM) fractions including nonhydrolyzable carbon (NHC), black carbon (BC) and humic acid (HA) was examined. The single-point organic carbon (OC)-norma...

Metal concentrations in aquatic macrophytes as influenced by soil and acidification

USGS Publications Warehouse

Sparling, D.W.; Lowe, T.P.

1998-01-01

Bioavailability of metals to aquatic plants is dependent on many factors including ambient metal concentration, pH of soil or water, concentration of ligands, competition with other metals for binding sites, and mode of exposure. Plants may be exposed to metals through water, air, or soil, depending on growth form. This paper examines the influence of soil type under two regimens of water acidification on metal uptake by four species of aquatic macrophytes: smartweed (Polygonum sagittatum), burreed (Sparganium americanum), pondweed (Potamogeton diversifolius), and bladderwort (Utricularia vulgaris) in constructed, experimentally acidified wetlands. Soil types consisted of a comparatively high-metal clay or a lower-metal sandy loam. Each pond was either acidified to pH ca. 4.85.3 or allowed to remain circumneutral. Metal concentrations tended to be higher in the submerged bladderwort and pondweed than in the emergent burreed and smartweed. Soils were important to plant metal concentrations in all species, but especially in the emergents. Acidification influenced plant concentrations of some metals and was especially important in the submerged pondweed. Bioaccumulation of metals occurred for Mn, B, Sr, Ba, and Zn, compared to soil concentrations.

Diel hysteresis between soil respiration and soil temperature in a biological soil crust covered desert ecosystem

PubMed Central

Li, Xinrong; Zhang, Peng; Chen, Yongle

2018-01-01

Soil respiration induced by biological soil crusts (BSCs) is an important process in the carbon (C) cycle in arid and semi-arid ecosystems, where vascular plants are restricted by the harsh environment, particularly the limited soil moisture. However, the interaction between temperature and soil respiration remains uncertain because of the number of factors that control soil respiration, including temperature and soil moisture, especially in BSC-dominated areas. In this study, the soil respiration in moss-dominated crusts and lichen-dominated crusts was continuously measured using an automated soil respiration system over a one-year period from November 2015 to October 2016 in the Shapotou region of the Tengger Desert, northern China. The results indicated that over daily cycles, the half-hourly soil respiration rates in both types of BSC-covered areas were commonly related to the soil temperature. The observed diel hysteresis between the half-hourly soil respiration rates and soil temperature in the BSC-covered areas was limited by nonlinearity loops with semielliptical shapes, and soil temperature often peaked later than the half-hourly soil respiration rates in the BSC-covered areas. The average lag times between the half-hourly soil respiration rates and soil temperature for both types of BSC-covered areas were two hours over the diel cycles, and they were negatively and linearly related to the volumetric soil water content. Our results highlight the diel hysteresis phenomenon that occurs between soil respiration rates and soil temperatures in BSC-covered areas and the negative response of this phenomenon to soil moisture, which may influence total C budget evaluations. Therefore, the interactive effects of soil temperature and moisture on soil respiration in BSC-covered areas should be considered in global carbon cycle models of desert ecosystems. PMID:29624606

Plant Condition Remote Monitoring Technique

NASA Technical Reports Server (NTRS)

Fotedar, L. K.; Krishen, K.

1996-01-01

This paper summarizes the results of a radiation transfer study conducted on houseplants using controlled environmental conditions. These conditions included: (1) air and soil temperature; (2) incident and reflected radiation; and (3) soil moisture. The reflectance, transmittance, and emittance measurements were conducted in six spectral bands: microwave, red, yellow, green, violet and infrared, over a period of three years. Measurements were taken on both healthy and diseased plants. The data was collected on plants under various conditions which included: variation in plant bio-mass, diurnal variation, changes in plant pathological conditions (including changes in water content), different plant types, various disease types, and incident light wavelength or color. Analysis of this data was performed to yield an algorithm for plant disease from the remotely sensed data.

Soil water repellency under stones, forest residue mulch and bare soil following wildfire.

NASA Astrophysics Data System (ADS)

Martins, Martinho A. S.; Prats, Sérgio A.; van Keulen, Daan; Vieira, Diana C. S.; Silva, Flávio C.; Keizer, Jan J.; Verheijen, Frank G. A.

2017-04-01

Soil water repellency (SWR) is a physical property that is commonly defined as the aptitude of soil to resist wetting. It has been documented for a wide range of soil and vegetation types, and can vary with soil organic matter (SOM) content and type, soil texture, soil moisture content (SMC) and soil temperature. Fire can induce, enhance or destroy SWR and, therefore, lead to considerable changes in soil water infiltration and storage and increase soil erosion by water, thereby weakening soil quality. In Portugal, wildfires occur frequently and affect large areas, on average some 100000 ha per year, but over 300000 ha in extreme years such as 2003 and 2005. This can have important implications in geomorphological and hydrological processes, as evidenced by the strong and sometimes extreme responses in post-fire runoff and erosion reported from various parts of the world, including Portugal. Thereby, the application of mulches from various materials to cover burned areas has been found to be an efficient stabilization treatment. However, little is known about possible side effects on SWR, especially long term effects. Forest SWR is very heterogeneous, as a result of variation in proximity to trees/shrubs, litter type and thickness, cracks, roots, and stones. This study targeted the spatial heterogeneity of soil water repellency under eucalypt plantation, five years after a wildfire and forest residue mulching application. The main objectives of this work were: 1) to assess the long-term effect of mulching application on the strength and spatial heterogeneity of topsoil SWR, by comparing SWR on bare soil, under stones, and under mulching remains; 2) to assess SWR at 1 cm depth between O and Ah horizons. The soil surface results showed that untreated bare soil areas were slightly more water repellent than mulched areas. However, under stones there were no SWR differences between mulched and control areas. At 1 cm depth, there was a marked mulching effect on SWR, even 5 years after application.

BOREAS TGB-12 Soil Carbon Data over the NSA

NASA Technical Reports Server (NTRS)

Trumbore, Susan; Hall, Forrest G. (Editor); Conrad, Sara K. (Editor); Harden, Jennifer; Sundquist, Eric; Winston, Greg

2000-01-01

The BOREAS TGB-12 team made measurements of soil carbon inventories, carbon concentration in soil gases, and rates of soil respiration at several sites to estimate the rates of carbon accumulation and turnover in each of the major vegetation types. TGB-12 data sets include soil properties at tower and selected auxiliary sites in the BOREAS NSA and data on the seasonal variations in the radiocarbon content of CO2 in the soil atmosphere at NSA tower sites. The sampling strategies for soils were designed to take advantage of local fire chronosequences, so that the accumulation of C in areas of moss regrowth could be determined. These data are used to calculate the inventory of C and N in moss and mineral soil layers at NSA sites and to determine the rates of input and turnover (using both accumulation since the last stand-killing fire and radiocarbon data). This data set includes physical parameters needed to determine carbon and nitrogen inventory in soils. The data were collected discontinuously from August 1993 to July 1996. The data are stored in tabular ASCII files.

Soil and surface layer type affect non-rainfall water inputs

NASA Astrophysics Data System (ADS)

Agam, Nurit; Berliner, Pedro; Jiang, Anxia

2017-04-01

Non-rainfall water inputs (NRWIs), which include fog deposition, dew formation, and direct water vapor adsorption by the soil, play a vital role in arid and semiarid regions. Environmental conditions, namely radiation, air temperature, air humidity, and wind speed, largely affect the water cycle driven by NRWIs. The substrate type (soil type and the existence/absence of a crust layer) may as well play a major role. Our objective was to quantify the effects of soil type (loess vs. sand) and surface layer (bare vs. crusted) on the gain and posterior evaporation of NRWIs in the Negev Highlands throughout the dry summer season. Four undisturbed soil samples (20 cm diameter and 50 cm depth) were excavated and simultaneously introduced into a PVC tube. Two samples were obtained in the Negev's Boker plain (loess soil) and two in the Nizzana sand dunes in the Western Negev. On one sample from each site the crust was removed while on the remaining one the natural crust was left in place. The samples were brought to the research site at the Jacob Bluestein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel (31˚08' N, 34˚53' E, 400 meter above the sea level) where they were exposed to the same environmental conditions. The four samples in their PVC tubes were placed on top of scales and the samples mass was continuously monitored. Soil temperatures were monitored at depths of 1, 2, 3, 5 and10 cm in each microlysimeter (ML) using Copper-Constantan thermocouples. The results of particle size distribution indicated that the crust of the loess soil is probably a physical crust, i.e., a crust that forms due to raindroplets impact; while the crust on the sand soil is biological. On most days, the loess soils adsorbed more water than their corresponding sand soil samples. For both soils, the samples for which the crust was removed adsorbed more water than the samples for which it was intact. The difference in daily water adsorption amount between crusted and non-crusted sandy soils often exceeded that between crusted and non-crusted loess soils.

Major and trace element geochemistry and background concentrations for soils in Connecticut

USGS Publications Warehouse

Brown, Craig; Thomas, Margaret A.

2014-01-01

Soil samples were collected throughout Connecticut (CT) to determine the relationship of soil chemistry with the underlying geology and to better understand background concentrations of major and trace elements in soils. Soil samples were collected (1) from the upper 5 cm of surficial soil at 100 sites, (2) from the A horizon at 86 of these sites, and (3) from the deeper horizon, typically the C horizon, at 79 of these sites. The <2-millimeter fraction of each sample was analyzed for 44 elements by methods that yield the total or near-total elemental content. Sample sites were characterized by glacial setting, underlying bedrock geology, and soil type. These spatial data were used with element concentrations in the C-horizon to relate geologic factors to soil chemistry. Concentrations of elements in C-horizon soils varied with grain size in surficial glacial materials and with underlying rock types, as determined using nonparametric statistical procedures. Concentrations of most elements in C-horizon soils showed a positive correlation with silt and (or) clay content and were higher in surficial materials mapped as till, thick till, and (or) fines. Element concentrations in C-horizon soils showed significant differences among the underlying geologic provinces and were highest overlying the Grenville Belt and (or) the Grenville Shelf Sequence Provinces in western CT. These rocks consist mainly of carbonates and the relatively high element concentrations in overlying soils likely result from less influence of dilution by quartz compared to other provinces. Element concentrations in C-horizon soils in CT were compared with those in samples from other New England states overlying similar lithologic bedrock types. The upper range of As concentrations in C-horizon soils overlying the New Hampshire-Maine (NH-ME) Sequence in CT was 15 mg/kg, lower than the upper range of 24 mg/kg in C-horizon soils overlying the same sequence in ME. In CT, U concentration means were significantly higher in C-horizon soils overlying Avalonian granites, and U concentrations ranged as high as 14 mg/kg, compared to those in C-horizon soil samples collected from other New England states, which ranged as high as 6.1 mg/kg in a sample in NH overlying the NH-ME Sequence. Element concentrations in C-horizon soils in CT were compared with those in samples collected from shallower depths. Concentrations of most major elements were highest in C-horizon soil samples, including Al, Ca, Fe, K, Na, and Ti, but element concentrations showed a relatively similar pattern in A-horizon and surficial soil samples among the underlying geologic provinces. Trace element concentrations, including Ba, W, Ga, Ni, Cs, Rb, Sr, Th, Sc, and U, also were higher in C-horizon soil samples than in overlying soil samples. Concentrations of Mg, and several trace elements, including Mn, P, As, Nb, Sn, Be, Bi, Hg, Se, Sb, La, Co, Cr, Pb, V, Y, Cu, Pb, and Zn were highest in some A-horizon or surficial soils, and indicate possible contributions from anthropogenic sources. Because element concentrations in soils above the C horizon are more likely to be affected by anthropogenic factors, concentration ranges in C-horizon soils and their spatially varying geologic associations should be considered when estimating background concentrations of elements in CT soils.

Ectomycorrhizal fungal diversity associated with endemic Tristaniopsis spp. (Myrtaceae) in ultramafic and volcano-sedimentary soils in New Caledonia.

PubMed

Waseem, Muhammad; Ducousso, Marc; Prin, Yves; Domergue, Odile; Hannibal, Laure; Majorel, Clarisse; Jourand, Philippe; Galiana, Antoine

2017-05-01

New Caledonian serpentine (ultramafic) soils contain high levels of toxic heavy metals, in particular nickel, (up to 20 g kg -1 ) and are deficient in essential elements like carbon, nitrogen and phosphorus while having a high magnesium/calcium ratio. Although previous studies showed that ectomycorrhizal symbioses could play an important role in the adaptation of the endemic plants to ultramafic soils (FEMS Microbiol Ecol 72:238-49, 2010), none of them have compared the diversity of microbial communities from ultramafic vs non-ultramafic soils in New Caledonia. We explored the impact of edaphic characteristics on the diversity of ectomycorrhizal (ECM) fungi associated with different endemic species of Tristaniopsis (Myrtaceae) growing under contrasting soil conditions in the natural ecosystems of New Caledonia. ECM root tips were thus sampled from two different ultramafic sites (Koniambo massif and Desmazures forest) vs two volcano-sedimentary ones (Arama and Mont Ninndo). The molecular characterization of the ECM fungi through partial sequencing of the ITS rRNA gene revealed the presence of different dominant fungal genera including, both soil types combined, Cortinarius (36.1%), Pisolithus (18.5%), Russula (13.4%), Heliotales (8.2%) and Boletellus (7.2%). A high diversity of ECM taxa associated with Tristaniopsis species was found in both ultramafic and volcano-sedimentary soils but no significant differences in ECM genera distribution were observed between both soil types. No link could be established between the phylogenetic clustering of ECM taxa and their soil type origin, thus suggesting a possible functional-rather than taxonomical-adaptation of ECM fungal communities to ultramafic soils.

Composition of methane-oxidizing bacterial communities as a function of nutrient loading in the Florida everglades.

PubMed

Chauhan, Ashvini; Pathak, Ashish; Ogram, Andrew

2012-10-01

Agricultural runoff of phosphorus (P) in the northern Florida Everglades has resulted in several ecosystem level changes, including shifts in the microbial ecology of carbon cycling, with significantly higher methane being produced in the nutrient-enriched soils. Little is, however, known of the structure and activities of methane-oxidizing bacteria (MOB) in these environments. To address this, 0 to 10 cm plant-associated soil cores were collected from nutrient-impacted (F1), transition (F4), and unimpacted (U3) areas, sectioned in 2-cm increments, and methane oxidation rates were measured. F1 soils consumed approximately two-fold higher methane than U3 soils; additionally, most probable numbers of methanotrophs were 4-log higher in F1 than U3 soils. Metabolically active MOB containing pmoA sequences were characterized by stable-isotope probing using 10 % (v/v) (13)CH(4). pmoA sequences, encoding the alpha subunit of methane monooxygenase and related to type I methanotrophs, were identified from both impacted and unimpacted soils. Additionally, impacted soils also harbored type II methanotrophs, which have been shown to exhibit preferences for high methane concentrations. Additionally, across all soils, novel pmoA-type sequences were also detected, indicating presence of MOB specific to the Everglades. Multivariate statistical analyses confirmed that eutrophic soils consisted of metabolically distinct MOB community that is likely driven by nutrient enrichment. This study enhances our understanding on the biological fate of methane being produced in productive wetland soils of the Florida Everglades and how nutrient-enrichment affects the composition of methanotroph bacterial communities.

Termite infestation associated with type of soil in pulau pinang, malaysia (isoptera: rhinotermitidae).

PubMed

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-12-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil.

Termite Infestation Associated with Type of Soil in Pulau Pinang, Malaysia (Isoptera: Rhinotermitidae)

PubMed Central

Majid, Abdul Hafiz Ab; Ahmad, Abu Hassan

2013-01-01

Nine soil samples from nine buildings infested with Coptotermes gestroi in Pulau Pinang, Malaysia, were tested for the type of soil texture. The soil texture analysis procedures used the hydrometer method. Four of nine buildings (44%) yielded loamy sand-type soil, whereas five of nine buildings (56%) contained sandy loam-type soil. PMID:24575252

Soil Bacterial Diversity Is Associated with Human Population Density in Urban Greenspaces.

PubMed

Wang, Haitao; Cheng, Minying; Dsouza, Melissa; Weisenhorn, Pamela; Zheng, Tianling; Gilbert, Jack A

2018-05-01

Urban greenspaces provide extensive ecosystem services, including pollutant remediation, water management, carbon maintenance, and nutrient cycling. However, while the urban soil microbiota underpin these services, we still have limited understanding of the factors that influence their distribution. We characterized soil bacterial communities from turf-grasses associated with urban parks, streets, and residential sites across a major urban environment, including a gradient of human population density. Bacterial diversity was significantly positively correlated with the population density; and species diversity was greater in park and street soils, compared to residential soils. Population density and greenspace type also led to significant differences in the microbial community composition that was also significantly correlated with soil pH, moisture, and texture. Co-occurrence network analysis revealed that microbial guilds in urban soils were well correlated. Abundant soil microbes in high density population areas had fewer interactions, while abundant bacteria in high moisture soils had more interactions. These results indicate the significant influence of changes in urban demographics and land-use on soil microbial communities. As urbanization is rapidly growing across the planet, it is important to improve our understanding of the consequences of urban zoning on the soil microbiota.

Seasonality, Rather than Nutrient Addition or Vegetation Types, Influenced Short-Term Temperature Sensitivity of Soil Organic Carbon Decomposition

PubMed Central

He, Feng-Peng; Wang, Wei

2016-01-01

The response of microbial respiration from soil organic carbon (SOC) decomposition to environmental changes plays a key role in predicting future trends of atmospheric CO2 concentration. However, it remains uncertain whether there is a universal trend in the response of microbial respiration to increased temperature and nutrient addition among different vegetation types. In this study, soils were sampled in spring, summer, autumn and winter from five dominant vegetation types, including pine, larch and birch forest, shrubland, and grassland, in the Saihanba area of northern China. Soil samples from each season were incubated at 1, 10, and 20°C for 5 to 7 days. Nitrogen (N; 0.035 mM as NH4NO3) and phosphorus (P; 0.03 mM as P2O5) were added to soil samples, and the responses of soil microbial respiration to increased temperature and nutrient addition were determined. We found a universal trend that soil microbial respiration increased with increased temperature regardless of sampling season or vegetation type. The temperature sensitivity (indicated by Q10, the increase in respiration rate with a 10°C increase in temperature) of microbial respiration was higher in spring and autumn than in summer and winter, irrespective of vegetation type. The Q10 was significantly positively correlated with microbial biomass and the fungal: bacterial ratio. Microbial respiration (or Q10) did not significantly respond to N or P addition. Our results suggest that short-term nutrient input might not change the SOC decomposition rate or its temperature sensitivity, whereas increased temperature might significantly enhance SOC decomposition in spring and autumn, compared with winter and summer. PMID:27070782

Soil fertility and plant diversity enhance microbial performance in metal-polluted soils.

PubMed

Stefanowicz, Anna M; Kapusta, Paweł; Szarek-Łukaszewska, Grażyna; Grodzińska, Krystyna; Niklińska, Maria; Vogt, Rolf D

2012-11-15

This study examined the effects of soil physicochemical properties (including heavy metal pollution) and vegetation parameters on soil basal respiration, microbial biomass, and the activity and functional richness of culturable soil bacteria and fungi. In a zinc and lead mining area (S Poland), 49 sites were selected to represent all common plant communities and comprise the area's diverse soil types. Numerous variables describing habitat properties were reduced by PCA to 7 independent factors, mainly representing subsoil type (metal-rich mining waste vs. sand), soil fertility (exchangeable Ca, Mg and K, total C and N, organic C), plant species richness, phosphorus content, water-soluble heavy metals (Zn, Cd and Pb), clay content and plant functional diversity (based on graminoids, legumes and non-leguminous forbs). Multiple regression analysis including these factors explained much of the variation in most microbial parameters; in the case of microbial respiration and biomass, it was 86% and 71%, respectively. The activity of soil microbes was positively affected mainly by soil fertility and, apparently, by the presence of mining waste in the subsoil. The mining waste contained vast amounts of trace metals (total Zn, Cd and Pb), but it promoted microbial performance due to its inherently high content of macronutrients (total Ca, Mg, K and C). Plant species richness had a relatively strong positive effect on all microbial parameters, except for the fungal component. In contrast, plant functional diversity was practically negligible in its effect on microbes. Other explanatory variables had only a minor positive effect (clay content) or no significant influence (phosphorus content) on microbial communities. The main conclusion from this study is that high nutrient availability and plant species richness positively affected the soil microbes and that this apparently counteracted the toxic effects of metal contamination. Copyright © 2012 Elsevier B.V. All rights reserved.

Soils in our big back yard: characterizing the state, vulnerabilities, and opportunities for detecting changes in soil carbon storage

NASA Astrophysics Data System (ADS)

Harden, Jennifer W.; Loiesel, Julie; Ryals, Rebecca; Lawrence, Corey; Blankinship, Joseph; Phillips, Claire; Bond-Lamberty, Ben; Todd-Brown, Katherine; Vargas, Rodrigo; Hugelius, Gustaf; Nave, Luke; Malhotra, Avni; Silver, Whendee; Sanderman, Jon

2017-04-01

A number of diverse approaches and sciences can contribute to a robust understanding of the I. state, II. vulnerabilities, and III. opportunities for soil carbon in context of its potential contributions to the atmospheric C budget. Soil state refers to the current C stock of a given site, region, or ecosystem/landuse type. Soil vulnerabilities refers to the forms and bioreactivity of C stocks, which determine how soil C might respond to climate, disturbance, and landuse perturbations. Opportunities refer to the potential for soils in their current state to increase capacity for and rate of C storage under future conditions, thereby impacting atmospheric C budgets. In order to capture the state, vulnerability, and opportunities for soil C, a robust C accounting scheme must include at least three science needs: (1) a user-friendly and dynamic database with transparent, shared coding in which data layers of solid, liquid, and gaseous phases share relational metadata and allow for changes over time (2) a framework to characterize the capacity and reactivity of different soil types based on climate, historic, and landscape factors (3) a framework to characterize landuse practices and their impact on physical state, capacity/reactivity, and potential for C change. In order to transfer our science information to practicable implementations for land policies, societal and social needs must also include: (1) metrics for landowners and policy experts to recognize conditions of vulnerability or opportunity (2)communication schemes for accessing salient outcomes of the science. Importantly, there stands an opportunity for contributions of data, model code, and conceptual frameworks in which scientists, educators, and decision-makers can become citizens of a shared, scrutinized database that contributes to a dynamic, improved understanding of our soil system.

Soils of northern spurs of the Cherskii Ridge in the area of the northern pole of cold: Morphology, properties, and classification

NASA Astrophysics Data System (ADS)

Okoneshnikova, M. V.; Desyatkin, R. V.

2017-08-01

The soils in the area of the northern pole of cold located on the interfluve between the Yana and Adycha rivers within the spurs of Kisilyakh Ridge included in the mountain system of Cherskii Ridge have been studied for the first time. The profile-genetic approach has been applied to describe the soils and determine their classification position. It is found that the major soil types in this region are the soils of the postlithogenic trunk belonging to the orders of lithozems (Cryic Leptosols), gley soils (Gleyic Skeletic Cryosols), and Al-Fe-humus soils (Spodic Skeletic Cryosols). The ecological ranges of altitudinal zones— the taiga zone with various types of lithozems below 630-700 m a.s.l. and the tundra zone with combinations of gley and nongley cryogenic soils above these heights—have been established. The development of gley or nongley soils is specified by the local orogenic and lithological conditions and slope aspect, which, in turn, control the degree of drainage and the presence and character of permafrost. In the profile of mountainous gley soils (gleyzems) with shallow ice-rich permafrost, cryogenic processes and features typical of the analogues of these soils on plains—cryogenic cracking, cryoturbation, solifluction, thixotropy, oxiaquic features above permafrost, saturation of the soil profile with mobile humus, etc.—are typical.

Community structure and succession regulation of fungal consortia in the lignocellulose-degrading process on natural biomass.

PubMed

Tian, Baoyu; Wang, Chunxiang; Lv, Ruirui; Zhou, Junxiong; Li, Xin; Zheng, Yi; Jin, Xiangyu; Wang, Mengli; Ye, Yongxia; Huang, Xinyi; Liu, Ping

2014-01-01

The study aims to investigate fungal community structures and dynamic changes in forest soil lignocellulose-degrading process. rRNA gene clone libraries for the samples collected in different stages of lignocellulose degradation process were constructed and analyzed. A total of 26 representative RFLP types were obtained from original soil clone library, including Mucoromycotina (29.5%), unclassified Zygomycetes (33.5%), Ascomycota (32.4%), and Basidiomycota (4.6%). When soil accumulated with natural lignocellulose, 16 RFLP types were identified from 8-day clone library, including Basidiomycota (62.5%), Ascomycota (36.1%), and Fungi incertae sedis (1.4%). After enrichment for 15 days, identified 11 RFLP types were placed in 3 fungal groups: Basidiomycota (86.9%), Ascomycota (11.5%), and Fungi incertae sedis (1.6%). The results showed richer, more diversity and abundance fungal groups in original forest soil. With the degradation of lignocellulose, fungal groups Mucoromycotina and Ascomycota decreased gradually, and wood-rotting fungi Basidiomycota increased and replaced the opportunist fungi to become predominant group. Most of the fungal clones identified in sample were related to the reported lignocellulose-decomposing strains. Understanding of the microbial community structure and dynamic change during natural lignocellulose-degrading process will provide us with an idea and a basis to construct available commercial lignocellulosic enzymes or microbial complex.

Underground barrier construction apparatus with soil-retaining shield

DOEpatents

Gardner, Bradley M.; Smith, Ann Marie; Hanson, Richard W.; Hodges, Richard T.

1998-01-01

An apparatus for building a horizontal underground barrier by cutting through soil and depositing a slurry, preferably one which cures into a hardened material. The apparatus includes a digging means for cutting and removing soil to create a void under the surface of the ground, a shield means for maintaining the void, and injection means for inserting barrier-forming material into the void. In one embodiment, the digging means is a continuous cutting chain. Mounted on the continuous cutting chain are cutter teeth for cutting through soil and discharge paddles for removing the loosened soil. This invention includes a barrier placement machine, a method for building an underground horizontal containment barrier using the barrier placement machine, and the underground containment system. Preferably the underground containment barrier goes underneath and around the site to be contained in a bathtub-type containment.

Evaporative losses from soils covered by physical and different types of biological soil crusts

USGS Publications Warehouse

Chamizo, S.; Cantón, Y.; Domingo, F.; Belnap, J.

2013-01-01

Evaporation of soil moisture is one of the most important processes affecting water availability in semiarid ecosystems. Biological soil crusts, which are widely distributed ground cover in these ecosystems, play a recognized role on water processes. Where they roughen surfaces, water residence time and thus infiltration can be greatly enhanced, whereas their ability to clog soil pores or cap the soil surface when wetted can greatly decrease infiltration rate, thus affecting evaporative losses. In this work, we compared evaporation in soils covered by physical crusts, biological crusts in different developmental stages and in the soils underlying the different biological crust types. Our results show that during the time of the highest evaporation (Day 1), there was no difference among any of the crust types or the soils underlying them. On Day 2, when soil moisture was moderately low (11%), evaporation was slightly higher in well-developed biological soil crusts than in physical or poorly developed biological soil crusts. However, crust removal did not cause significant changes in evaporation compared with the respective soil crust type. These results suggest that the small differences we observed in evaporation among crust types could be caused by differences in the properties of the soil underneath the biological crusts. At low soil moisture (<6%), there was no difference in evaporation among crust types or the underlying soils. Water loss for the complete evaporative cycle (from saturation to dry soil) was similar in both crusted and scraped soils. Therefore, we conclude that for the specific crust and soil types tested, the presence or the type of biological soil crust did not greatly modify evaporation with respect to physical crusts or scraped soils.

Determination of Matric Suction and Saturation Degree for Unsaturated Soils, Comparative Study - Numerical Method versus Analytical Method

NASA Astrophysics Data System (ADS)

Chiorean, Vasile-Florin

2017-10-01

Matric suction is a soil parameter which influences the behaviour of unsaturated soils in both terms of shear strength and permeability. It is a necessary aspect to know the variation of matric suction in unsaturated soil zone for solving geotechnical issues like unsaturated soil slopes stability or bearing capacity for unsaturated foundation ground. Mathematical expression of the dependency between soil moisture content and it’s matric suction (soil water characteristic curve) has a powerful character of nonlinearity. This paper presents two methods to determine the variation of matric suction along the depth included between groundwater level and soil level. First method is an analytical approach to emphasize one direction steady state unsaturated infiltration phenomenon that occurs between the groundwater level and the soil level. There were simulated three different situations in terms of border conditions: precipitations (inflow conditions on ground surface), evaporation (outflow conditions on ground surface), and perfect equilibrium (no flow on ground surface). Numerical method is finite element method used for steady state, two-dimensional, unsaturated infiltration calculus. Regarding boundary conditions there were simulated identical situations as in analytical approach. For both methods, was adopted the equation proposed by van Genuchten-Mualen (1980) for mathematical expression of soil water characteristic curve. Also for the unsaturated soil permeability prediction model was adopted the equation proposed by van Genuchten-Mualen. The fitting parameters of these models were adopted according to RETC 6.02 software in function of soil type. The analyses were performed in both methods for three major soil types: clay, silt and sand. For each soil type were concluded analyses for three situations in terms of border conditions applied on soil surface: inflow, outflow, and no flow. The obtained results are presented in order to highlight the differences/similarities between the methods and the advantages / disadvantages of each one.

Hydrologic characterization of desert soils with varying degrees of pedogenesis: 2. Inverse modeling for eff ective properties

USGS Publications Warehouse

Mirus, B.B.; Perkins, K.S.; Nimmo, J.R.; Singha, K.

2009-01-01

To understand their relation to pedogenic development, soil hydraulic properties in the Mojave Desert were investi- gated for three deposit types: (i) recently deposited sediments in an active wash, (ii) a soil of early Holocene age, and (iii) a highly developed soil of late Pleistocene age. Eff ective parameter values were estimated for a simplifi ed model based on Richards' equation using a fl ow simulator (VS2D), an inverse algorithm (UCODE-2005), and matric pressure and water content data from three ponded infi ltration experiments. The inverse problem framework was designed to account for the eff ects of subsurface lateral spreading of infi ltrated water. Although none of the inverse problems converged on a unique, best-fi t parameter set, a minimum standard error of regression was reached for each deposit type. Parameter sets from the numerous inversions that reached the minimum error were used to develop probability distribu tions for each parameter and deposit type. Electrical resistance imaging obtained for two of the three infi ltration experiments was used to independently test fl ow model performance. Simulations for the active wash and Holocene soil successfully depicted the lateral and vertical fl uxes. Simulations of the more pedogenically developed Pleistocene soil did not adequately replicate the observed fl ow processes, which would require a more complex conceptual model to include smaller scale heterogeneities. The inverse-modeling results, however, indicate that with increasing age, the steep slope of the soil water retention curve shitis toward more negative matric pressures. Assigning eff ective soil hydraulic properties based on soil age provides a promising framework for future development of regional-scale models of soil moisture dynamics in arid environments for land-management applications. ?? Soil Science Society of America.

Human land-use and soil change

USGS Publications Warehouse

Wills, Skye A.; Williams, Candiss O.; Duniway, Michael C.; Veenstra, Jessica; Seybold, Cathy; Pressley, DeAnn

2017-01-01

Soil change refers to the alteration of soil and soil properties over time in one location, as opposed to soil variability across space. Although soils change with pedogensis, this chapter focuses on human caused soil change. Soil change can occur with human use and management over long or short time periods and small or large scales. While change can be negative or positive; often soil change is observed when short-term or narrow goals overshadow the other soil’s ecosystem services. Many soils have been changed in their chemical, physical or biological properties through agricultural activities, including cultivation, tillage, weeding, terracing, subsoiling, deep plowing, manure and fertilizer addition, liming, draining, and irrigation. Assessing soil change depends upon the ecosystem services and soil functions being evaluated. The interaction of soil properties with the type and intensity of management and disturbance determines the changes that will be observed. Tillage of cropland disrupts aggregates and decreases soil organic carbon content which can lead to decreased infiltration, increased erosion, and reduced biological function. Improved agricultural management systems can increase soil functions including crop productivity and sustainability. Forest management is most intensive during harvesting and seedling establishment. Most active management in forests causes disturbance of the soil surface which may include loss of forest floor organic materials, increases in bulk density, and increased risk of erosion. In grazing lands, pasture management often includes periods of biological, chemical and physical disturbance in addition to the grazing management imposed on rangelands. Grazing animals have both direct and indirect impacts on soil change. Hoof action can lead to the disturbance of biological crusts and other surface features impairing the soil’s physical, biological and hydrological function. There are clear feedbacks between vegetative systems and soil properties; when vegetation is altered because of grazing or other disturbances, soil property changes often follow. Some soils are very sensitive to management and disturbance and can undergo rapid change: cropping led to massive gully formation in the southeastern USA, exposure of acid-sulfate soils led to irreversible changes in soil minerology and thawing of cold soils has created thermokarst features. These soil changes alter soil properties and functions and may impact soil ecosystem services far into the future.

Bacteria as Emerging Indicators of Soil Condition

PubMed Central

Hermans, Syrie M.; Buckley, Hannah L.; Case, Bradley S.; Curran-Cournane, Fiona; Taylor, Matthew

2016-01-01

ABSTRACT Bacterial communities are important for the health and productivity of soil ecosystems and have great potential as novel indicators of environmental perturbations. To assess how they are affected by anthropogenic activity and to determine their ability to provide alternative metrics of environmental health, we sought to define which soil variables bacteria respond to across multiple soil types and land uses. We determined, through 16S rRNA gene amplicon sequencing, the composition of bacterial communities in soil samples from 110 natural or human-impacted sites, located up to 300 km apart. Overall, soil bacterial communities varied more in response to changing soil environments than in response to changes in climate or increasing geographic distance. We identified strong correlations between the relative abundances of members of Pirellulaceae and soil pH, members of Gaiellaceae and carbon-to-nitrogen ratios, members of Bradyrhizobium and the levels of Olsen P (a measure of plant available phosphorus), and members of Chitinophagaceae and aluminum concentrations. These relationships between specific soil attributes and individual soil taxa not only highlight ecological characteristics of these organisms but also demonstrate the ability of key bacterial taxonomic groups to reflect the impact of specific anthropogenic activities, even in comparisons of samples across large geographic areas and diverse soil types. Overall, we provide strong evidence that there is scope to use relative taxon abundances as biological indicators of soil condition. IMPORTANCE The impact of land use change and management on soil microbial community composition remains poorly understood. Therefore, we explored the relationship between a wide range of soil factors and soil bacterial community composition. We included variables related to anthropogenic activity and collected samples across a large spatial scale to interrogate the complex relationships between various bacterial community attributes and soil condition. We provide evidence of strong relationships between individual taxa and specific soil attributes even across large spatial scales and soil and land use types. Collectively, we were able to demonstrate the largely untapped potential of microorganisms to indicate the condition of soil and thereby influence the way that we monitor the effects of anthropogenic activity on soil ecosystems into the future. PMID:27793827

Bacteria as Emerging Indicators of Soil Condition.

PubMed

Hermans, Syrie M; Buckley, Hannah L; Case, Bradley S; Curran-Cournane, Fiona; Taylor, Matthew; Lear, Gavin

2017-01-01

Bacterial communities are important for the health and productivity of soil ecosystems and have great potential as novel indicators of environmental perturbations. To assess how they are affected by anthropogenic activity and to determine their ability to provide alternative metrics of environmental health, we sought to define which soil variables bacteria respond to across multiple soil types and land uses. We determined, through 16S rRNA gene amplicon sequencing, the composition of bacterial communities in soil samples from 110 natural or human-impacted sites, located up to 300 km apart. Overall, soil bacterial communities varied more in response to changing soil environments than in response to changes in climate or increasing geographic distance. We identified strong correlations between the relative abundances of members of Pirellulaceae and soil pH, members of Gaiellaceae and carbon-to-nitrogen ratios, members of Bradyrhizobium and the levels of Olsen P (a measure of plant available phosphorus), and members of Chitinophagaceae and aluminum concentrations. These relationships between specific soil attributes and individual soil taxa not only highlight ecological characteristics of these organisms but also demonstrate the ability of key bacterial taxonomic groups to reflect the impact of specific anthropogenic activities, even in comparisons of samples across large geographic areas and diverse soil types. Overall, we provide strong evidence that there is scope to use relative taxon abundances as biological indicators of soil condition. The impact of land use change and management on soil microbial community composition remains poorly understood. Therefore, we explored the relationship between a wide range of soil factors and soil bacterial community composition. We included variables related to anthropogenic activity and collected samples across a large spatial scale to interrogate the complex relationships between various bacterial community attributes and soil condition. We provide evidence of strong relationships between individual taxa and specific soil attributes even across large spatial scales and soil and land use types. Collectively, we were able to demonstrate the largely untapped potential of microorganisms to indicate the condition of soil and thereby influence the way that we monitor the effects of anthropogenic activity on soil ecosystems into the future. Copyright © 2016 American Society for Microbiology.

Enzyme activity in terrestrial soil in relation to exploration of the Martian surface

NASA Technical Reports Server (NTRS)

Ardakani, M. S.; Mclaren, A. D.; Pukite, A. H.

1972-01-01

An exploration was made of enzyme activities in soil, including abundance, persistence and localization of these activities. An attempt was made to develop procedures for the detection and assaying of enzymes in soils suitable for presumptive tests for life in planetary soils. A suitable extraction procedure for soil enzymes was developed and measurements were made of activities in extracts in order to study how urease is complexed in soil organic matter. Mathematical models were developed, based on enzyme action and microbial growth in soil, for rates of oxidation of nitrogen as nitrogen compounds are moved downward in soil by water flow. These biogeochemical models should be applicable to any percolating system, with suitable modification for special features, such as oxygen concetrations, and types of hydrodynamic flow.

Soil classification for seismic site effect using MASW and ReMi methods: A case study from western Anatolia (Dikili -İzmir)

NASA Astrophysics Data System (ADS)

Karabulut, Savaş

2018-03-01

The study area is located in the northern part of Izmir, Western Turkey, prone to an active tectonic extensional regime and includes typical features of sedimentary basins, horst-grabens surrounded by a series of normal and strike-slip faults. In September 1939 the Dikili (Kabakum) earthquake with a magnitude of Mw: 6.6 occurred and after this phenomenon, residents moved from the west of Dikili to the east (i.d. soft sediments to relative to rock area). A proper estimate of the earthquake-related hazard for the area is the main objective of this study. The site effect and soil engineering problems for estimating hazard parameters at the soil surface need to be carefully analyzed for seismic site classification and geo-engineering problems like soil liquefaction, soil settlement, soil bearing capacity and soil amplification. To solve the soil static and dynamic problems, shear-wave velocities have been used in a joint interpretation process; Multichannel Analysis of Surface Waves (MASW) and Refraction Microtremor (ReMi) analyses were conducted on 121 sites with 300 × 300 m grid size in an area of 60 km2. It has been proposed that the probability of an earthquake with a magnitude of Mw: 6 occurring within 10 years is 64%, when considering the Gutenberg-Richter model. This puts the region under an important earthquake risk. The estimated Vs30 values are ≤180 m/s in the central and the northernmost part of the study area are showing an E type soil after the classification of NEHRP, where alluvial deposits are dominant. Vs30 values in the north and central part are between 180 ≤ Vs ≤ 360 m/s suggesting a D type soil. In the southernmost part of the study area where volcanic rocks are widely distributed, Vs30 values range between 360 and 908 m/s, corresponding to a C type and B type soil. The results show that soil liquefaction induced settlement and soil amplification are the most important problems in the south and the northernmost part of the study area, which is densely populated and encompasses the urbanized part of the study region.

Reconciling Harvest Intensity and Plant Diversity in Boreal Ecosystems: Does Intensification Influence Understory Plant Diversity?

PubMed

Kershaw, H Maureen; Morris, Dave M; Fleming, Robert L; Luckai, Nancy J

2015-11-01

Overall demand for forest products in the boreal forest is increasing to supply growing bio-energy demands in addition to traditional forest products. As a result, there is a need to refine current forest policies to reconcile production and ecosystem function within the context of ecologically sustainable management. This study assessed understory plants' richness, evenness, and diversity in six harvested boreal black spruce-dominated stands situated on loam, sand, and peat site types 15 years after the application of four harvest treatments of increasing biomass removals. Treatments included uncut, stem-only harvest, full-tree harvest, and full-tree harvest + blading of O horizon. Following canopy removal, species richness and diversity (Shannon's and Simpson's indices) increased on all soil types. The more than doubling of slash loading on the stem-only treatment plots compared to the full-tree plots led to significantly lower species diversity on loam sites; however, the reverse was observed on peat sites where the slash provided warmer, drier microsites facilitating the establishment of a broader array of species. Preexisting ericaceous shrub and sphagnum components continued to dominate on the peat sites. Compositional shifts were most evident for the full-tree + bladed treatment on all soil types, with increases in herbaceous cover including ruderal species. The results suggest that the intensification of harvesting on plant diversity varies with soil type, and these differential results should be considered in the refinement of forest biomass-harvesting guidelines to ensure ecological sustainability and biodiversity conservation over a broad suite of soil types.

Trace element biogeochemistry in the soil-water-plant system of a temperate agricultural soil amended with different biochars.

PubMed

Kloss, Stefanie; Zehetner, Franz; Buecker, Jannis; Oburger, Eva; Wenzel, Walter W; Enders, Akio; Lehmann, Johannes; Soja, Gerhard

2015-03-01

Various biochar (BC) types have been investigated as soil amendment; however, information on their effects on trace element (TE) biogeochemistry in the soil-water-plant system is still scarce. In the present study, we determined aqua-regia (AR) and water-extractable TEs of four BC types (woodchips (WC), wheat straw (WS), vineyard pruning (VP), pyrolyzed at 525 °C, of which VP was also pyrolyzed at 400 °C) and studied their effects on TE concentrations in leachates and mustard (Sinapis alba L.) tissue in a greenhouse pot experiment. We used an acidic, sandy agricultural soil and a BC application rate of 3% (w/w). Our results show that contents and extractability of TEs in the BCs and effectuated changes of TE biogeochemistry in the soil-water-plant system strongly varied among the different BC types. High AR-digestable Cu was found in VP and high B contents in WC. WS had the highest impact on TEs in leachates showing increased concentrations of As, Cd, Mo, and Se, whereas WC application resulted in enhanced leaching of B. All BC types increased Mo and decreased Cu concentrations in the plant tissue; however, they showed diverging effects on Cu in the leachates with decreased concentrations for WC and WS, but increased concentrations for both VPs. Our results demonstrate that BCs may release TEs into the soil-water-plant system. A BC-induced liming effect in acidic soils may lead to decreased plant uptake of cationic TEs, including Pb and Cd, but may enhance the mobility of anionic TEs like Mo and As. We also found that BCs with high salt contents (e.g., straw-based BCs) may lead to increased mobility of both anionic and cationic TEs in the short term.

Integrated GIS and multivariate statistical analysis for regional scale assessment of heavy metal soil contamination: A critical review.

PubMed

Hou, Deyi; O'Connor, David; Nathanail, Paul; Tian, Li; Ma, Yan

2017-12-01

Heavy metal soil contamination is associated with potential toxicity to humans or ecotoxicity. Scholars have increasingly used a combination of geographical information science (GIS) with geostatistical and multivariate statistical analysis techniques to examine the spatial distribution of heavy metals in soils at a regional scale. A review of such studies showed that most soil sampling programs were based on grid patterns and composite sampling methodologies. Many programs intended to characterize various soil types and land use types. The most often used sampling depth intervals were 0-0.10 m, or 0-0.20 m, below surface; and the sampling densities used ranged from 0.0004 to 6.1 samples per km 2 , with a median of 0.4 samples per km 2 . The most widely used spatial interpolators were inverse distance weighted interpolation and ordinary kriging; and the most often used multivariate statistical analysis techniques were principal component analysis and cluster analysis. The review also identified several determining and correlating factors in heavy metal distribution in soils, including soil type, soil pH, soil organic matter, land use type, Fe, Al, and heavy metal concentrations. The major natural and anthropogenic sources of heavy metals were found to derive from lithogenic origin, roadway and transportation, atmospheric deposition, wastewater and runoff from industrial and mining facilities, fertilizer application, livestock manure, and sewage sludge. This review argues that the full potential of integrated GIS and multivariate statistical analysis for assessing heavy metal distribution in soils on a regional scale has not yet been fully realized. It is proposed that future research be conducted to map multivariate results in GIS to pinpoint specific anthropogenic sources, to analyze temporal trends in addition to spatial patterns, to optimize modeling parameters, and to expand the use of different multivariate analysis tools beyond principal component analysis (PCA) and cluster analysis (CA). Copyright © 2017 Elsevier Ltd. All rights reserved.

Pupal development of Ceratitis capitata (Diptera: Tephritidae) and Diachasmimorpha longicaudata (Hymenoptera: Braconidae) at different moisture values in four soil types.

PubMed

Bento, F de M M; Marques, R N; Costa, M L Z; Walder, J M M; Silva, A P; Parra, J R P

2010-08-01

This study aimed to evaluate adult emergence and duration of the pupal stage of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), and emergence of the fruit fly parasitoid, Diachasmimorpha longicaudata (Ashmead), under different moisture conditions in four soil types, using soil water matric potential. Pupal stage duration in C. capitata was influenced differently for males and females. In females, only soil type affected pupal stage duration, which was longer in a clay soil. In males, pupal stage duration was individually influenced by moisture and soil type, with a reduction in pupal stage duration in a heavy clay soil and in a sandy clay, with longer duration in the clay soil. As matric potential decreased, duration of the pupal stage of C. capitata males increased, regardless of soil type. C. capitata emergence was affected by moisture, regardless of soil type, and was higher in drier soils. The emergence of D. longicaudata adults was individually influenced by soil type and moisture factors, and the number of emerged D. longicaudata adults was three times higher in sandy loam and lower in a heavy clay soil. Always, the number of emerged adults was higher at higher moisture conditions. C. capitata and D. longicaudata pupal development was affected by moisture and soil type, which may facilitate pest sampling and allow release areas for the parasitoid to be defined under field conditions.

Bacterial phylogeny structures soil resistomes across habitats

PubMed Central

Forsberg, Kevin J.; Patel, Sanket; Gibson, Molly K.; Lauber, Christian L.; Knight, Rob; Fierer, Noah; Dantas, Gautam

2014-01-01

Summary Ancient and diverse antibiotic resistance genes (ARGs) have previously been identified from soil1–3, including genes identical to those in human pathogens4. Despite the apparent overlap between soil and clinical resistomes4–6, factors influencing ARG composition in soil and their movement between genomes and habitats remain largely unknown3. General metagenome functions often correlate with the underlying structure of bacterial communities7–12. However, ARGs are hypothesized to be highly mobile4,5,13, prompting speculation that resistomes may not correlate with phylogenetic signatures or ecological divisions13,14. To investigate these relationships, we performed functional metagenomic selections for resistance to 18 antibiotics from 18 agricultural and grassland soils. The 2895 ARGs we discovered were predominantly novel, and represent all major resistance mechanisms15. We demonstrate that distinct soil types harbor distinct resistomes, and that nitrogen fertilizer amendments strongly influenced soil ARG content. Resistome composition also correlated with microbial phylogenetic and taxonomic structure, both across and within soil types. Consistent with this strong correlation, mobility elements syntenic with ARGs were rare in soil compared to sequenced pathogens, suggesting that ARGs in the soil may not transfer between bacteria as readily as is observed in the clinic. Together, our results indicate that bacterial community composition is the primary determinant of soil ARG content, challenging previous hypotheses that horizontal gene transfer effectively decouples resistomes from phylogeny13,14. PMID:24847883

Bacterial phylogeny structures soil resistomes across habitats

NASA Astrophysics Data System (ADS)

Forsberg, Kevin J.; Patel, Sanket; Gibson, Molly K.; Lauber, Christian L.; Knight, Rob; Fierer, Noah; Dantas, Gautam

2014-05-01

Ancient and diverse antibiotic resistance genes (ARGs) have previously been identified from soil, including genes identical to those in human pathogens. Despite the apparent overlap between soil and clinical resistomes, factors influencing ARG composition in soil and their movement between genomes and habitats remain largely unknown. General metagenome functions often correlate with the underlying structure of bacterial communities. However, ARGs are proposed to be highly mobile, prompting speculation that resistomes may not correlate with phylogenetic signatures or ecological divisions. To investigate these relationships, we performed functional metagenomic selections for resistance to 18 antibiotics from 18 agricultural and grassland soils. The 2,895 ARGs we discovered were mostly new, and represent all major resistance mechanisms. We demonstrate that distinct soil types harbour distinct resistomes, and that the addition of nitrogen fertilizer strongly influenced soil ARG content. Resistome composition also correlated with microbial phylogenetic and taxonomic structure, both across and within soil types. Consistent with this strong correlation, mobility elements (genes responsible for horizontal gene transfer between bacteria such as transposases and integrases) syntenic with ARGs were rare in soil by comparison with sequenced pathogens, suggesting that ARGs may not transfer between soil bacteria as readily as is observed between human pathogens. Together, our results indicate that bacterial community composition is the primary determinant of soil ARG content, challenging previous hypotheses that horizontal gene transfer effectively decouples resistomes from phylogeny.

Towards Novel Techniques for Root Phenotyping Using GPR

NASA Astrophysics Data System (ADS)

Kobylinski, C.; Neely, H.; Everett, M. E.; Hays, D. B.; Lewis, K.

2017-12-01

The ability to phenotype roots in situ would provide information for carbon sequestration potential through increased root mass, possible water-seeking strategies by plants, and generate data for plant breeders. One technique for root phenotyping is to measure differences in soil moisture and use this data to infer root presence or absence. Current technologies for soil moisture detection include electromagnetic induction and neutron moisture meters; however, ground penetrating radar (GPR) has been suggested to monitor root phenotypes. The objective of this study is to use GPR as a novel technique for detecting roots and classifying root phenotypes based on the detection of differences in dielectric permittivity in response to changes in soil water content. The study will be conducted at two sites in Texas: Thrall, TX (Burleson clay) and Lubbock, TX (Olton clay loam). Three root types will be investigated: fibrous (grain sorghum), tap root (cowpea), and mixed (9-species). Data will be collected along a 10 m linear transect in each plot with a PulseEkko GPR bi-static unit operating at a radio frequency of 500 MHz. Additionally, an EM38-MK2 survey will be performed along each transect. Soil surface moisture readings will be collected with a ML3 ThetaProbe soil moisture sensor and a neutron moisture meter will be used to obtain soil moisture measurements down to 1.2 m. Measurements will be collected every two weeks throughout the growing season. Soil properties including particle size distribution, cation exchange capacity, and bulk density will also be measured. GPR's ability to distinguish root types across soils will be assessed.

A Conformal, Fully-Conservative Approach for Predicting Blast Effects on Ground Vehicles

DTIC Science & Technology

2014-02-09

hydrocode. Again, a very detailed model of the pick-up truck was used. The results demonstrated that the soil type and moisture content affect both...dynamics code with the capability to model soil and blast using a multi- species formulation with advanced equations of state. The two-way coupling...of the blast, the effects of soil , which could have a high water content, must also be included. An attractive strategy, which is much less costly

Meta-regression analysis of commensal and pathogenic Escherichia coli survival in soil and water.

PubMed

Franz, Eelco; Schijven, Jack; de Roda Husman, Ana Maria; Blaak, Hetty

2014-06-17

The extent to which pathogenic and commensal E. coli (respectively PEC and CEC) can survive, and which factors predominantly determine the rate of decline, are crucial issues from a public health point of view. The goal of this study was to provide a quantitative summary of the variability in E. coli survival in soil and water over a broad range of individual studies and to identify the most important sources of variability. To that end, a meta-regression analysis on available literature data was conducted. The considerable variation in reported decline rates indicated that the persistence of E. coli is not easily predictable. The meta-analysis demonstrated that for soil and water, the type of experiment (laboratory or field), the matrix subtype (type of water and soil), and temperature were the main factors included in the regression analysis. A higher average decline rate in soil of PEC compared with CEC was observed. The regression models explained at best 57% of the variation in decline rate in soil and 41% of the variation in decline rate in water. This indicates that additional factors, not included in the current meta-regression analysis, are of importance but rarely reported. More complete reporting of experimental conditions may allow future inference on the global effects of these variables on the decline rate of E. coli.

Effect of addition of GGBS and lime in soil stabilisation for stabilising local village roads in Thanjavur region

NASA Astrophysics Data System (ADS)

Saravanan, R.; Udhayakumar, T.; Dinesh, S.; Venkatasubramanian, C.; Muthu, D.

2017-07-01

Construction of pavements uses various filling materials and due to the cost factor, the local soil is used for pavement construction. The strength of the soil is improved by stabilisation. This stabilisation increases the load bearing capacities of soil for heavy wheeled vehicle traffic. GGBS, silica fume, rice husk are the basic waste materials used as a waste material, which improves the quality of soil and reduces the cost of pavements. In this study, a detailed investigation is made on the Ground Granulated Blast-furnace Slag (GGBS), activated by lime, in the stabilisation of low bearing capacity sand and clay soils collected from Thanjavur district (Budalur, Sengipatti, Vallam and Palliahgraharam villages). The tests are carried out as per Indian Standards. The test procedures separated into two phases, namely Stage-I and Stage-II. In Stage-I the soil tests include soil type, particle size distribution, soil index properties, standard proctor tests, shear tests and CBR test. In Stage-II the soil tests include shear tests and CBR test for the suitable required proportions of GGBS along with lime in the collected soil samples. The test results from stage-I and stage-II are compared and from the study, it is inferred that the application of GGBS is a useful material for soil stabilisation.

Classification of anthropogenic soils by new diagnostic criteria involved in the Slovak Soil Classification System (2014)

NASA Astrophysics Data System (ADS)

Sobocká, Jaroslava; Balkovič, Juraj; Bedrna, Zoltán

2017-04-01

Anthropogenic soils can be found mostly in SUITMA areas. The issue of adequate and correct description and classification of these soils occurs very often and can result in inconsistent even in contradictory opinions. In the new version of the anthropogenic soil classification system in Slovakia some new diagnostics criteria were involved and applied for better understanding the inherent nature of these soils. The group of the former anthropogenic soils was divided following scheme of soil reference groups in the WRB 2014 (Anthrozem and Technozem). According to the new version of the Slovak anthropogenic soils classification (2014) there have been distinguished 2 groups of anthropogenic soils: 1) cultivated soils group including 2 soil types (in Slovak terminology): Kultizem and Hortizem and 2) technogenic soils group having 2 soil types: Antrozem and Technozem. Cultivated soil group represents soils developing or forming "in-situ" with diagnostic horizons characterized by human deeply influenced cultivated processes. Technogenic soil group are soils developing like "ex-situ" soils. The key features recognizing technogenic soil group are human-transported and altered material (HTAM = ex-situ aspect), and artefacts content. Diagnostic horizons (top and subsoil) were described as various material affected by physical-mechanical excavation, transportation and spread, mixing, and containing artefacts (the new diagnostic feature). Kultizems are differentiated by cultivated horizon(s) and Technozems by anthropogenic horizon(s). Cultivated horizons are mostly well-known described horizon in many scientific references. Anthropogenic horizons for Technozem are developed from the human-induced transported and altered material which origin is from the other ecological locality that adjacent area. Materials (or substrates) can consist of various material (natural, technogenic or their mixing) with thickness ≥ 60 cm. Artefacts are the second diagnostic feature which presence authenticates the "artificial origin" of the soil. Natural material contains ≤ 10 % artefacts; natural-technogenic 10-40 % artefacts; and technogenic ≥ 40 %. In the soil survey anthropogenic transported or altered layer is very simply recognizable in soil profile if it is compared with adjacent natural horizons. The classification problem is to define and distinguish not only artefacts in soil profile but recognize the origin of the material. The completed manual for these issues is missing. In the contribution, there graphically individual basic soil types of Antrozems and Technozems with some subtypes will be illustrated. Also the basic schema of classification units in Slovakia will be depicted.

The History of Electromagnetic Induction Techniques in Soil Survey

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Doolittle, Jim

2014-05-01

Electromagnetic induction (EMI) has been used to characterize the spatial variability of soil properties since the late 1970s. Initially used to assess soil salinity, the use of EMI in soil studies has expanded to include: mapping soil types; characterizing soil water content and flow patterns; assessing variations in soil texture, compaction, organic matter content, and pH; and determining the depth to subsurface horizons, stratigraphic layers or bedrock, among other uses. In all cases the soil property being investigated must influence soil apparent electrical conductivity (ECa) either directly or indirectly for EMI techniques to be effective. An increasing number and diversity of EMI sensors have been developed in response to users' needs and the availability of allied technologies, which have greatly improved the functionality of these tools. EMI investigations provide several benefits for soil studies. The large amount of georeferenced data that can be rapidly and inexpensively collected with EMI provides more complete characterization of the spatial variations in soil properties than traditional sampling techniques. In addition, compared to traditional soil survey methods, EMI can more effectively characterize diffuse soil boundaries and identify included areas of dissimilar soils within mapped soil units, giving soil scientists greater confidence when collecting spatial soil information. EMI techniques do have limitations; results are site-specific and can vary depending on the complex interactions among multiple and variable soil properties. Despite this, EMI techniques are increasingly being used to investigate the spatial variability of soil properties at field and landscape scales.

Stress differentially impacts reserve pools and root exudation: implications for ecosystem functioning and carbon balance

NASA Astrophysics Data System (ADS)

Landhäusser, Simon; Karst, Justine; Wiley, Erin; Gaster, Jacob

2016-04-01

Environmental stress can influence carbon assimilation and the accumulation and distribution of carbon between growth, reserves, and exudation; however, it is unclear how these processes vary by different stress types. Partitioning of carbon to growth and reserves in plants might also vary between different organs. Roots reserves are of particular interest as they link the plant with the soil carbon cycle through exudation. Simple models of diffusion across concentration gradients predict the more C reserves in roots, the more C should be exuded from roots. However, the mechanisms underlying the accumulation and loss of C from roots may differ depending on the stress experienced by the plants. In a controlled study we tested whether different types of stresses (shade, cold soil, and drought) have differential effects on the distribution, abundance, and form (sugar vs. starch) of carbohydrates in seedlings, and whether these changes alone could explain differences in root exudation between stress types. Non-structural carbohydrate (NSC) concentration and pool sizes varied by stress type and between organs. Mass-specific C exudation increased with fine root sugar concentration; however, stress type affected exudation independently of reserve concentration. Seedlings exposed to cold soils exuded the most C on a per root mass basis followed by shade and drought. Through 13C labeling, we also found that depending on the stress type, aspen seedlings may be less able to control the loss of C to the soil compared with unstressed seedlings, resulting in more C leaked to the rhizosphere. The loss of C beyond that predicted by simple concentration gradients might have important implications for ecosystem functioning and carbon balance. If stressed plants lose proportionally more carbon to the soil, existing interactions between plants and soils may decouple under stress, and may include unexpected C fluxes between trees, soils and the atmosphere with a changing climate.

The effect of soil type on the bioremediation of petroleum contaminated soils.

PubMed

Haghollahi, Ali; Fazaelipoor, Mohammad Hassan; Schaffie, Mahin

2016-09-15

In this research the bioremediation of four different types of contaminated soils was monitored as a function of time and moisture content. The soils were categorized as sandy soil containing 100% sand (type I), clay soil containing more than 95% clay (type II), coarse grained soil containing 68% gravel and 32% sand (type III), and coarse grained with high clay content containing 40% gravel, 20% sand, and 40% clay (type IV). The initially clean soils were contaminated with gasoil to the concentration of 100 g/kg, and left on the floor for the evaporation of light hydrocarbons. A full factorial experimental design with soil type (four levels), and moisture content (10 and 20%) as the factors was employed. The soils were inoculated with petroleum degrading microorganisms. Soil samples were taken on days 90, 180, and 270, and the residual total petroleum hydrocarbon (TPH) was extracted using soxhlet apparatus. The moisture content of the soils was kept almost constant during the process by intermittent addition of water. The results showed that the efficiency of bioremediation was affected significantly by the soil type (Pvalue < 0.05). The removal percentage was the highest (70%) for the sandy soil with the initial TPH content of 69.62 g/kg, and the lowest for the clay soil (23.5%) with the initial TPH content of 69.70 g/kg. The effect of moisture content on bioremediation was not statistically significant for the investigated levels. The removal percentage in the clay soil was improved to 57% (within a month) in a separate experiment by more frequent mixing of the soil, indicating low availability of oxygen as a reason for low degradation of hydrocarbons in the clay soil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Characteristics of Soil and Organic Carbon Loss Induced by Water Erosion on the Loess Plateau in China

PubMed Central

Li, Zhongwu; Nie, Xiaodong; Chang, Xiaofeng; Liu, Lin; Sun, Liying

2016-01-01

Soil erosion has been a common environmental problem in the Loess Plateau in China. This study aims to better understand the losses of soil organic carbon (SOC) induced by water erosion. Laboratory-simulated rainfall experiments were conducted to investigate the characteristics of SOC loss induced by water erosion. The applied treatments included two rainfall intensities (90 and 120 mm h-1), four slope gradients (10°, 15°, 20°, and 25°), and two typical soil types- silty clay loam and silty loam. Results showed that the sediment OC enrichment ratios (ERoc) in all the events were relative stable with values ranged from 0.85 to1.21 and 0.64 to 1.52 and mean values of 0.98 and 1.01 for silty clay loam and silty loam, respectively. Similar to the ERoc, the proportions of different sized particles in sediment showed tiny variations during erosion processes. No significant correlation was observed between ERoc values and the proportions of sediment particles. Slope, rainfall intensity and soil type almost had no impact on ERoc. These results indicate that the transportation of SOC during erosion processes was nonselective. While the mean SOC loss rates for the events of silty clay loam and silty loam were 0.30 and 0.08 g m-2 min-1, respectively. Greater differences in SOC loss rates were found in events among different soil types. Meanwhile, significant correlations between SOC loss and soil loss for all the events were observed. These results indicated that the amount of SOC loss was influenced primarily by soil loss and the SOC content of the original soil. Erosion pattern and original SOC content are two main factors by which different soils can influence SOC loss. It seems that soil type has a greater impact on SOC loss than rainfall characteristics on the Loess Plateau of China. However, more kinds of soils should be further studied due to the special formation processes in the Loess Plateau. PMID:27124482

Characteristics of Soil and Organic Carbon Loss Induced by Water Erosion on the Loess Plateau in China.

PubMed

Li, Zhongwu; Nie, Xiaodong; Chang, Xiaofeng; Liu, Lin; Sun, Liying

2016-01-01

Soil erosion has been a common environmental problem in the Loess Plateau in China. This study aims to better understand the losses of soil organic carbon (SOC) induced by water erosion. Laboratory-simulated rainfall experiments were conducted to investigate the characteristics of SOC loss induced by water erosion. The applied treatments included two rainfall intensities (90 and 120 mm h-1), four slope gradients (10°, 15°, 20°, and 25°), and two typical soil types- silty clay loam and silty loam. Results showed that the sediment OC enrichment ratios (ERoc) in all the events were relative stable with values ranged from 0.85 to1.21 and 0.64 to 1.52 and mean values of 0.98 and 1.01 for silty clay loam and silty loam, respectively. Similar to the ERoc, the proportions of different sized particles in sediment showed tiny variations during erosion processes. No significant correlation was observed between ERoc values and the proportions of sediment particles. Slope, rainfall intensity and soil type almost had no impact on ERoc. These results indicate that the transportation of SOC during erosion processes was nonselective. While the mean SOC loss rates for the events of silty clay loam and silty loam were 0.30 and 0.08 g m-2 min-1, respectively. Greater differences in SOC loss rates were found in events among different soil types. Meanwhile, significant correlations between SOC loss and soil loss for all the events were observed. These results indicated that the amount of SOC loss was influenced primarily by soil loss and the SOC content of the original soil. Erosion pattern and original SOC content are two main factors by which different soils can influence SOC loss. It seems that soil type has a greater impact on SOC loss than rainfall characteristics on the Loess Plateau of China. However, more kinds of soils should be further studied due to the special formation processes in the Loess Plateau.

Characteristics and influencing factors of tetrachloroethylene sorption-desorption on soil and its components.

PubMed

Qiu, Zhaofu; Yang, Weiwei; He, Long; Zhao, Zhexuan; Lu, Shuguang; Sui, Qian

2016-02-01

To investigate the effects of soil structure, soil organic carbon (SOC), minerals, initial tetrachloroethylene (PCE) concentration (C0), and ionic strength (Ci) on PCE sorption-desorption, six types of soil were adopted as adsorbents, including two types of natural soil and four types of soil with most of the "soft carbon" pre-treated by H2O2 or with all SOC removed from the original soil by 600 °C ignition. The results showed that all of the sorption-desorption isotherms of PCE were non-linear within the experimental range, and the H2O2-treated samples exhibited higher non-linear sorption isotherms than those of the original soils. The hysteresis index of PCE sorption to original soil is less pronounced than that of the H2O2-treated and 600 °C-heated samples due to the entrapment of sorbate molecules in the "hard carbon" domain, together with the meso- and microporous structures within the 600 °C-heated samples. Both SOC and minerals have impacts on the sorption-desorption of PCE, and the sorption-desorption contribution rate of minerals increased with decreasing SOC content. C0 has almost no influence on the sorption to minerals of the soils, but the contribution rate of minerals decreased with increasing C0 in the desorption stage. As a result of the salting-out effect, PCE sorption capacity was increased by increasing Ci, especially when Ci ≥ 0.1 M. Moreover, desorption increased and hysteresis weakened with increasing Ci, except for the 600 °C-heated samples. In addition, no significant effect of Ci on desorption of PCE and no hysteresis was observed in this experimental range for the 600 °C-heated samples. Copyright © 2015 Elsevier Ltd. All rights reserved.

Microwave assisted solvent extraction and coupled-column reversed-phase liquid chromatography with UV detection use of an analytical restricted-access-medium column for the efficient multi-residue analysis of acidic pesticides in soils.

PubMed

Hogendoom, E A; Huls, R; Dijkman, E; Hoogerbrugge, R

2001-12-14

A screening method has been developed for the determination of acidic pesticides in various types of soils. Methodology is based on the use of microwave assisted solvent extraction (MASE) for fast and efficient extraction of the analytes from the soils and coupled-column reversed-phase liquid chromatography (LC-LC) with UV detection at 228 nm for the instrumental analysis of uncleaned extracts. Four types of soils, including sand, clay and peat, with a range in organic matter content of 0.3-13% and ten acidic pesticides of different chemical families (bentazone, bromoxynil, metsulfuron-methyl, 2,4-D, MCPA, MCPP, 2,4-DP, 2,4,5-T, 2,4-DB and MCPB) were selected as matrices and analytes, respectively. The method developed included the selection of suitable MASE and LC-LC conditions. The latter consisted of the selection of a 5-microm GFF-II internal surface reversed-phase (ISRP, Pinkerton) analytical column (50 x 4.6 mm, I.D.) as the first column in the RAM-C18 configuration in combination with an optimised linear gradient elution including on-line cleanup of sample extracts and reconditioning of the columns. The method was validated with the analysis of freshly spiked samples and samples with aged residues (120 days). The four types of soils were spiked with the ten acidic pesticides at levels between 20 and 200 microg/kg. Weighted regression of the recovery data showed for most analyte-matrix combinations, including freshly spiked samples and aged residues, that the method provides overall recoveries between 60 and 90% with relative standard deviations of the intra-laboratory reproducibility's between 5 and 25%; LODs were obtained between 5 and 50 microg/kg. Evaluation of the data set with principal component analysis revealed that the parameters (i) increase of organic matter content of the soil samples and (ii) aged residues negatively effect the recovery of the analytes.

[Convertibility of the data determined by ICP-AES and FAAS for soil available K and Na].

PubMed

Zhang, Jian-min; Wang, Meng; Ge, Xiao-ping; Wu, Jian-zhi; Ge, Ying; Li, Shi-peng; Chang, Jie

2009-05-01

In recent years, inductively coupled plasma atomic emission spectrometry (ICP-AES) have been commonly used to determine the soil available K and Na with the extraction solution of HCl-H2SO4, while previous data of soil available K and Na were measured by flame atomic absorption spectrometry (FAAS) with the extraction solution of NH4OAc. In order to utilize previous data, quest for the convertibility of the data determined by ICP-AES and FAAS, and compare the data determined by both methods, the authors chose four types of soil to determine soil available K and Na by ICP-AES and FAAS, respectively. Four types of soil represent grit soil, clay, silt from river and silt from sea, respectively. Soil samples included four types of soil and these samples represent different soil nutrition. The authors analyzed the correlations of two kinds of measured data. The paired samples t-test proves that there was significantly positively correlation between these two methods. The correlation coefficient of the data between these two methods for measuring soil available K is 0.98. The results of soil available K determined by the two methods can be conversed through the formula, y = l.14x + 6.53 (R2 = 0.91, n=24, p < 0.001). As for Na, although there is a significantly positively correlation between these two methods, the slopes of single model of clay and grit soil were different from that of general model. And so the results determined by the two methods can be conversed through different formula according to the types of soil, that is, for clay: y = l.23x + 10.03; for grit soil: y = 3.12x - 23.03; for silt: y = 0.60x. In conclusion, the authors' results showed that previous data of available K and Na measured by FAAS with the extraction solution of NH4OAc were available. And these data were comparable to the data measured by ICP-AES through definite formula The authors' results also suggested that ICP-AES was preferable when many elements were measured at the same time. Under this condition, ICP-AES was economical, efficient and reliable.

Underground barrier construction apparatus with soil-retaining shield

DOEpatents

Gardner, B.M.; Smith, A.M.; Hanson, R.W.; Hodges, R.T.

1998-08-04

An apparatus is described for building a horizontal underground barrier by cutting through soil and depositing a slurry, preferably one which cures into a hardened material. The apparatus includes a digging means for cutting and removing soil to create a void under the surface of the ground, a shield means for maintaining the void, and injection means for inserting barrier-forming material into the void. In one embodiment, the digging means is a continuous cutting chain. Mounted on the continuous cutting chain are cutter teeth for cutting through soil and discharge paddles for removing the loosened soil. This invention includes a barrier placement machine, a method for building an underground horizontal containment barrier using the barrier placement machine, and the underground containment system. Preferably the underground containment barrier goes underneath and around the site to be contained in a bathtub-type containment. 17 figs.

GPR monitoring for non-uniform infiltration through a high permeable gravel layer in the test sand box

NASA Astrophysics Data System (ADS)

Kuroda, Seiichiro; Ishii, Nobuyuki; Morii, Toshihiro

2017-04-01

Recently capillary barriers have been known as a method to protect subsurface regions against infiltration from soil surface. It has essentially non-uniform structure of permeability or soil physical property. To identify the function of the capillary barrier, the site-characterization technique for non-uniform soil moisture distribution and infiltration process is needed. We built a sand box in which a thin high-permeable gravel layer was embedded and conducted a infiltration test, including non-uniform flow of soil water induced by capillary barrier effects. We monitored this process by various types of GPR measurements, including time-lapsed soundings with multi-frequency antenna and transmission measurements like one using cross-borehole radar. Finally we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil. This work has partially supported by JSPS Grant-in-aid Scientific Research program, No.16H02580.

[Seasonal dynamics of soil organic carbon mineralization for two forest types in Xiaoxing'an Mountains, China].

PubMed

Gao, Fei; Lin, Wei; Cui, Xiao-yang

2016-01-01

To investigate the seasonal dynamics of soil organic carbon (SOC) mineralization in Xiaoxing'an Mountain, we incubated soil samples collected from virgin Korean pine forest and broad-leaved secondary forest in different seasons in the laboratory and measured the SOC mineralization rate and cumulative SOC mineralization (Cm). We employed simultaneous reaction model to describe C mineralization kinetics and estimated SOC mineralization parameters including soil easily mineralizable C (C1), potentially mineralizable C (C₀). We also analyzed the relations between Cm, C₁and their influencing factors. Results showed that the incubated SOC mineralization rate and Cm for 0-5 cm soil layer decreased from early spring to late autumn, while for 5-10 cm soil layer the seasonal variation was not statistically significant for both forest types. The C₁ in 0-5 and 5-10 cm soil layers varied from 42.92-92.18 and 19.23-32.95 mg kg⁻¹, respectively, while the C₀ in 0-5 and 5-10 cm soil layers varied from 863.92-3957.15 and 434.15-865.79 mg · kg⁻¹, respec- tively. Both C₁ and C₀ decreased from early spring to late autumn. The proportions of C₀ in SOC for two forest types were 0.74%-2.78% and 1.11%-1.84% in 0-5 and 5-10 cm soil layers, respectively, and decreased from early spring to late autumn, indicating that SOC tended to become more stable as a whole from spring to autumn. The Cm and C₀ were significantly positively correlated to in situ soil water content and hot water-extractable carbohydrate content, but were not correlated to in situ soil temperature and cool water-extractable carbohydrate content. We concluded that soil labile organic carbon, soil physical and chemical properties contributed to the seasonal dynamics of SOC mineralization in the forests.

Geochemical and isotopic water results, Barrow, Alaska, 2012-2013

DOE Data Explorer

Heikoop, Jeff; Wilson, Cathy; Newman, Brent

2012-07-18

Data include a large suite of analytes (geochemical and isotopic) for samples collected in Barrow, Alaska (2012-2013). Sample types are indicated, and include soil pore waters, drainage waters, snowmelt, precipitation, and permafrost samples.

Bacterial community composition in Brazilian Anthrosols and adjacent soils characterized using culturing and molecular identification.

PubMed

O'Neill, B; Grossman, J; Tsai, M T; Gomes, J E; Lehmann, J; Peterson, J; Neves, E; Thies, J E

2009-07-01

Microbial community composition was examined in two soil types, Anthrosols and adjacent soils, sampled from three locations in the Brazilian Amazon. The Anthrosols, also known as Amazonian dark earths, are highly fertile soils that are a legacy of pre-Columbian settlement. Both Anthrosols and adjacent soils are derived from the same parent material and subject to the same environmental conditions, including rainfall and temperature; however, the Anthrosols contain high levels of charcoal-like black carbon from which they derive their dark color. The Anthrosols typically have higher cation exchange capacity, higher pH, and higher phosphorus and calcium contents. We used culture media prepared from soil extracts to isolate bacteria unique to the two soil types and then sequenced their 16S rRNA genes to determine their phylogenetic placement. Higher numbers of culturable bacteria, by over two orders of magnitude at the deepest sampling depths, were counted in the Anthrosols. Sequences of bacteria isolated on soil extract media yielded five possible new bacterial families. Also, a higher number of families in the bacteria were represented by isolates from the deeper soil depths in the Anthrosols. Higher bacterial populations and a greater diversity of isolates were found in all of the Anthrosols, to a depth of up to 1 m, compared to adjacent soils located within 50-500 m of their associated Anthrosols. Compared to standard culture media, soil extract media revealed diverse soil microbial populations adapted to the unique biochemistry and physiological ecology of these Anthrosols.

Lithologic distribution and geologic history of the Apollo 17 site: The record in soils and small rock particles from the highland massifs

NASA Astrophysics Data System (ADS)

Jolliff, Bradley L.; Rockow, Kaylynn M.; Korotev, Randy L.; Haskin, Larry A.

1996-01-01

Through analysis by instrumental neutron activation (INAA) of 789 individual lithic fragments from the 2 mm-4 mm grain-size fractions of five Apollo 17 soil samples (72443, 72503, 73243, 76283, and 76503) and petrographic examination of a subset, we have determined the diversity and proportions of rock types recorded within soils from the highland massifs. The distribution of rock types at the site, as recorded by lithic fragments in the soils, is an alternative to the distribution inferred from the limited number of large rock samples. The compositions and proportions of 2 mm-4 mm fragments provide a bridge between compositions of <1 mm fines, and types and proportions of rocks observed in large collected breccias and their clasts. The 2 mm-4 mm fraction of soil from South Massif, represented by an unbiased set of lithic fragments from station-2 samples 72443 and 72503, consists of 71% noritic impact-melt breccia, 7% incompatible-trace-element-(ITE)-poor highland rock types (mainly granulitic breccias), 19% agglutinates and regolith breccias, 1% high-Ti mare basalt, and 2% others (very-low-Ti (VLT) basalt, monzogabbro breccia, and metal). In contrast, the 2 mm-4 mm fraction of a soil from the North Massif, represented by an unbiased set of lithic fragments from station-6 sample 76503, has a greater proportion of ITE-poor highland rock types and mare-basalt fragments: it consists of 29% ITE-poor highland rock types (mainly granulitic breccias and troctolitic anorthosite), 25% impact-melt breccia, 13% high-Ti mare basalt, 31% agglutinates and regolith breccias, 1% orange glass and related breccia, and 1% others. Based on a comparison of mass-weighted mean compositions of the lithic fragments with compositions of soil fines from all Apollo 17 highland stations, differences between the station-2 and station-6 samples are representative of differences between available samples from the two massifs. From the distribution of different rock types and their compositions, we conclude the following: (1) North-Massif and South-Massif soil samples differ significantly in types and proportions of ITE-poor highland components and ITE-rich impact-melt-breccia components. These differences reflect crudely layered massifs and known local geology. The greater percentage of impact-melt breccia in the South-Massif light-mantle soil stems from derivation of the light mantle from the top of the massif, which apparently is richer in noritic impact-melt breccia than are lower parts of the massifs. (2) At station 2, the 2 mm-4 mm grain-size fraction is enriched in impact-melt breccias compared to the <1 mm fraction, suggesting that the <1 mm fraction within the light mantle has a greater proportion of lithologies such as granulitic breccias which are more prevalent lower in the massifs and which we infer to be older (pre-basin) highland components. (3) Soil from station 6, North Massif, contains magnesian troctolitic anorthosite, which is a component that is rare in station-2 South-Massif soils. (4) Compositional differences between poikilitic impact-melt breccias from the two massifs suggest broad-scale heterogeneity in impact-melt breccia interpreted by most investigators to be ejecta from the Serenitatis basin. We have found rock types not previously recognized or uncommon at the Apollo 17 site. These include (1) ITE-rich impact-melt breccias that are compositionally distinct from previously recognized "aphanitic" and "poikilitic" groups at Apollo 17; (2) regolith breccias that are free of mare components and poor in impact melt of the types associated with the main melt-breccia groups, and that, if those groups derive from the Serenitatis impact, may represent the pre-Serenitatis surface; (3) several VLT basalts, including an unusual very-high-K basaltic breccia; (4) orange-glass regolith breccias; (5) aphanitic-matrix melt breccias at station 6; (6) fragments of alkali-rich composition, including alkali anorthosite, and monzogabbro; (7) one fragment of 72275-type KREEP basalt from station 3; (8) seven lithic fragments of ferroan-anorthositic-suite rocks; and (9) a fragment of metal, possibly from an L chondrite. Some of these lithologies have been found only as lithic fragments in the soils and not among the large rock samples. In contrast, we have not found among the 2 mm-4 mm lithic fragments individual samples of certain lithologies that have been recognized as clasts in breccias (e.g., dunite and spinel troctolite). The diversity of lithologic information contained in the lithic fragments of these soils nearly equals that found among large rock samples, and most information bearing on petrographic relationships is maintained, even in such small samples. Given a small number of large samples for "petrologic ground truth," small lithic fragments contained in soil "scoop" samples can provide the basis for interpreting the diversity of rock types and their proportions in remotely sensed geologic units. They should be considered essential targets for future automated sample-analysis and sample-return missions.

Effects of an invasive plant species, celastrus orbiculatus, on soil composition and processes

USGS Publications Warehouse

Leicht-Young, S. A.; O'Donnell, H.; Latimer, A.M.; Silander, J.A.

2009-01-01

Celastrus orbiculatus is a non-native, invasive liana that was introduced to the United States in the 1860s and has spread rapidly throughout the Northeast Several attributes contribute to the invasiveness of C. orbiculatus, including tolerance to a wide range of light levels and habitat types. We compared soil characteristics in seven sets of adjacent, paired plots, spanning a range of habitats and soil types, with and without C. orbiculatus. The paired plots were similar other than the presence or absence of Celastrus. Plots with C. orbiculatus had significantly higher soil pH, potassium, calcium and magnesium levels. Furthermore, nitrogen mineralization and litter decomposition rates were higher in plots with C. orbiculatus. Phosphorus levels were not significantly different between the paired plots. The results of this study contribute to the growing body of research of the effects of invasive species on ecosystem processes.

Evaluation of Thematic Mapper data for mapping forest, agricultural and soil resources

NASA Technical Reports Server (NTRS)

Degloria, S.; Benson, A.; Dummer, K.; Fakhoury, E.

1985-01-01

Color composite TM film products which include TM5, TM4, and a visible band (TM1, TM2, or TM3) are superior to composites which exclude TM4 for discriminating most forest and agricultural cover types and estimating area proportions for inventory and sampling purposes. Clustering a subset of TM data results in a spectral class map which groups diverse forest cover types into spectrally and ecologically similar areas suitable for use as a stratification base in traditional forest inventory practices. Analysis of simulated Thematic Mapper data indicate that the location and number of TM spectral bands are suitable for detecting differences in major soil properties and characterizing soil spectral curve form and magnitude.

Crop residue incorporation for increasing SOC stock. Is it worth it?

NASA Astrophysics Data System (ADS)

Pituello, Chiara; Berti, Antonio; Morari, Francesco

2015-04-01

In the last fifty years, soil organic carbon (SOC) in North-Eastern Italy decreased at rates ranging from 0.02 to 0.58 t ha/year as a consequence of the intensification and simplification of cropping systems. Most recently, the removal of crop residue for bioenergy production raises concerns about its potential impact on SOC evolution. Crop residue incorporation has been included in the Recommended Management Practices (RMPs) for climate change mitigation, however, several doubts still remain on its actual effectiveness. Indeed, long term effects of residue incorporation on SOC stocks have been studied by many authors with apparently contrasting findings. Thus, given the pivotal role played by SOC on ecosystem services, investigating the effects of residues incorporation on soil quality constitutes a key step towards understanding soil processes and will help establish a rationale bioenergy production policy. For this purpose, soil samples were taken from a long-term field experiment started in 1970, with three types of soil: sand, silt-loam and clay. The experiment design adopted implied a crop rotation including maize, wheat, and potatoes with only two types of residues management: incorporation and removal. The levels of nitrogen application were six (0, 50, 100, 200, 300, 400 kg ha-1) with a factorial combination with the residues management. Residue incorporation affected significantly the carbon stock within the profile (0-70cm), with an average increase in carbon content from 60 to 67 t C ha-1 in 42 years (0.16 t C ha-1 y-1). In clay and silt-loam soils the C stock varied within the whole profile, with an increase in the upper layer (0-20 cm) ranging from 29% (silt-loam) to 60% (clay soil) of the total increment. Conversely, in sand soil the effect was found only in the upper horizon, where the incorporation of residues increased SOC of only 1.9 t ha-1. This indicates that in sand soil the increase of C is mainly attributable to the direct effect of residues input, while in the other two soils the accumulation depends both on direct effect and root-C input due to the enhancement of crop growth. The effectiveness of residue incorporation strongly depends on the type of soil, a factor which should be considered by the future bioenergy production policy.

Determinants of arbuscular mycorrhizal communities - soil properties or land use?

NASA Astrophysics Data System (ADS)

Jansa, J.; Erb, A.; Oberholzer, H.-R.; Šmilauer, P.; Egli, S.

2012-04-01

Arbuscular mycorrhizal (AM) fungi accompanied terrestrial plants since some 500 million years of their evolution and are now widespread in all continents and virtually all soils of the world. They establish symbiotic interactions with a majority of extant higher plant species including most economically important plants. They are heavily implicated in plant nutrition, plant-soil carbon cycling, and tolerance to environmental stresses. Under field conditions, AM fungi usually form multispecies communities both in the soils and in plant roots, and it is becoming well established that various human interventions like cropping, crop rotation, tillage, and fertilization may all drive changes in the community composition of these fungi and, consequently, in the symbiotic benefits to the plants. Most of current evidence is stemming from individual short and long-term field trials, and the different studies usually employed diverse approaches, limiting the comparability of results across sites. Large scale sampling designs using unified research methods across different soil types and land use systems have hardly been employed so far. However, this would be imperative to allow direct comparisons of the effects of various environmental conditions (soil type, climate) and human land use practices on the indigenous soil-borne symbiotic microbes in general and the AM fungi in particular. To contribute to filling this gap, we conducted molecular profiling of AM communities in more than 150 Swiss agricultural soils, developed on a range of parent materials, covering a wide range of soil properties such as pH value, texture, carbon content and altitude, and including highly productive fields through alpine pastures. This study indicated strong correlations between AM fungal community patterns and features like soil pH and texture, as well as some consistent shifts in fungal communities due to specific aspects of land use like tillage or fertilization. These results thus appear to be of paramount importance for defining broadly valid thresholds in using AM communities as universal soil quality indicators. Expanding the current efforts on a global scale will be discussed.

Agricultural legacies in forest environments: tree communities, soil properties, and light availability.

PubMed

Flinn, Kathryn M; Marks, P L

2007-03-01

Temperate deciduous forests across much of Europe and eastern North America reflect legacies of past land use, particularly in the diversity and composition of plant communities. Intense disturbances, such as clearing forests for agriculture, may cause persistent environmental changes that continue to shape vegetation patterns as landscapes recover. We assessed the long-term consequences of agriculture for environmental conditions in central New York forests, including tree community structure and composition, soil physical and chemical properties, and light availability. To isolate the effects of agriculture, we compared 20 adjacent pairs of forests that were never cleared for agriculture (primary forests) and forests that established 85-100 years ago on plowed fields (secondary forests). Tree communities in primary and secondary forests had similar stem density, though secondary forests had 14% greater basal area. Species composition differed dramatically between the two forest types, with primary forests dominated by Acer saccharum and Fagus grandifolia and secondary forests by Acer rubrum and Pinus strobus. Primary and secondary forests showed no consistent differences in soil physical properties or in the principal gradient of soil fertility associated with soil pH. Within stands, however, soil water content and pH were more variable in primary forests. Secondary forest soils had 15% less organic matter, 16% less total carbon, and 29% less extractable phosphorus in the top 10 cm than adjacent primary stands, though the ranges of the forest types mostly overlapped. Understory light availability in primary and secondary forests was similar. These results suggest that, within 100 years, post-agricultural stands have recovered conditions comparable to less disturbed forests in many attributes, including tree size and number, soil physical properties, soil chemical properties associated with pH, and understory light availability. The principal legacies of agriculture that remain in these forests are the reduced levels of soil organic matter, carbon, and phosphorus; the spatial homogenization of soil properties; and the altered species composition of the vegetation.

Relevance of anisotropy and spatial variability of gas diffusivity for soil-gas transport

NASA Astrophysics Data System (ADS)

Schack-Kirchner, Helmer; Kühne, Anke; Lang, Friederike

2017-04-01

Models of soil gas transport generally do not consider neither direction dependence of gas diffusivity, nor its small-scale variability. However, in a recent study, we could provide evidence for anisotropy favouring vertical gas diffusion in natural soils. We hypothesize that gas transport models based on gas diffusion data measured with soil rings are strongly influenced by both, anisotropy and spatial variability and the use of averaged diffusivities could be misleading. To test this we used a 2-dimensional model of soil gas transport to under compacted wheel tracks to model the soil-air oxygen distribution in the soil. The model was parametrized with data obtained from soil-ring measurements with its central tendency and variability. The model includes vertical parameter variability as well as variation perpendicular to the elongated wheel track. Different parametrization types have been tested: [i)]Averaged values for wheel track and undisturbed. em [ii)]Random distribution of soil cells with normally distributed variability within the strata. em [iii)]Random distributed soil cells with uniformly distributed variability within the strata. All three types of small-scale variability has been tested for [j)] isotropic gas diffusivity and em [jj)]reduced horizontal gas diffusivity (constant factor), yielding in total six models. As expected the different parametrizations had an important influence to the aeration state under wheel tracks with the strongest oxygen depletion in case of uniformly distributed variability and anisotropy towards higher vertical diffusivity. The simple simulation approach clearly showed the relevance of anisotropy and spatial variability in case of identical central tendency measures of gas diffusivity. However, until now it did not consider spatial dependency of variability, that could even aggravate effects. To consider anisotropy and spatial variability in gas transport models we recommend a) to measure soil-gas transport parameters spatially explicit including different directions and b) to use random-field stochastic models to assess the possible effects for gas-exchange models.

Monitoring Carbon Fluxes from Shallow Surface Soils in the Critical Zone

NASA Astrophysics Data System (ADS)

Stielstra, C. M.; Brooks, P. D.; Chorover, J.

2011-12-01

The critical zone (CZ) is the earth's porous near-surface layer, characterized by the integrated processes that occur between the bedrock and the atmospheric boundary layer. Within this area water, atmosphere, ecosystems, and soils interact on a geomorphic and geologic template. We hypothesize that CZ systems organize and evolve in response to open system fluxes of energy and mass, including meteoric inputs of radiation, water, and carbon, which can be quantified at point to watershed scales. The goal of this study is to link above-ground and below-ground carbon processes by quantifying carbon pools and fluxes from near surface soils. Soil CO2 efflux and dissolved organic carbon (DOC) are monitored over a two year period across bedrock type and vegetation type at two seasonally snow covered subalpine catchments in Arizona and New Mexico. We measure the amount of DOC present in surface soils, and install ion exchange resins at the A/B soil horizon interface to capture DOC leachate mobilized during snowmelt and summer rainfall. Throughout the summer rain and spring snowmelt seasons we monitor soil respiration of CO2. Preliminary results show that rates of gaseous carbon flux are significantly higher (p<0.05) from soils with schist bedrock (2.5 ± 0.2 gC/m2/d )than from granite bedrock (1.3 ± 0.1 gC/m2/d), and higher from healthy mixed conifer forests (1.9 ± 0.3 gC/m2/d) than from mixed conifer forests impacted by spruce budworm (1.4 ± 0.1 gC/m2/d). DOC leached from soil samples does not vary significantly with bedrock type; however, spruce budworm impacted forests have significantly higher levels of leachable DOC in surface soils (22.8 ± 4.5 gC/m2) than are found in the soils of healthy forests (10.0 ± 1.5 gC/m2) or subalpine meadows (9.1 ± 0.5 gC/m2). The results of this study will allow us to evaluate the variability of carbon fluxes with vegetation and soil type within a shallow soil carbon pool and help constrain the contributions of soil organic carbon to net carbon balance in CZO catchments with seasonal precipitation regimes.

Land-use change and soil type are drivers of fungal and archaeal communities in the Pampa biome.

PubMed

Lupatini, Manoeli; Jacques, Rodrigo Josemar Seminoti; Antoniolli, Zaida Inês; Suleiman, Afnan Khalil Ahmad; Fulthorpe, Roberta R; Roesch, Luiz Fernando Würdig

2013-02-01

The current study aimed to test the hypothesis that both land-use change and soil type are responsible for the major changes in the fungal and archaeal community structure and functioning of the soil microbial community in Brazilian Pampa biome. Soil samples were collected at sites with different land-uses (native grassland, native forest, Eucalyptus and Acacia plantation, soybean and watermelon field) and in a typical toposequence in Pampa biome formed by Paleudult, Albaqualf and alluvial soils. The structure of soil microbial community (archaeal and fungal) was evaluated by ribosomal intergenic spacer analysis and soil functional capabilities were measured by microbial biomass carbon and metabolic quotient. We detected different patterns in microbial community driven by land-use change and soil type, showing that both factors are significant drivers of fungal and archaeal community structure and biomass and microbial activity. Fungal community structure was more affected by land-use and archaeal community was more affected by soil type. Irrespective of the land-use or soil type, a large percentage of operational taxonomic unit were shared among the soils. We accepted the hypothesis that both land-use change and soil type are drivers of archaeal and fungal community structure and soil functional capabilities. Moreover, we also suggest the existence of a soil microbial core.

A Comparison of Arrhenius and Macromolecular Rate Theory for Predicting Temperature Responses of Soil CO2 Production

NASA Astrophysics Data System (ADS)

Alster, C. J.; Koyama, A.; Johnson, N. G.; von Fischer, J.

2015-12-01

Soil microbes catalyze many key ecosystem functions, including soil respiration, and are thus important for understanding global carbon cycles and other biogeochemical cycles. One important component in predicting rates of respiration is determining how microbial communities respond to temperature. A range of models have been developed for determining temperature sensitivity of soil biological activities, most of which are based on the Arrhenius equation. This equation predicts an exponential increase in rate with temperature, despite field and laboratory results suggesting a temperature optimum below the denaturation point. Recently, Schipper et al. (2014) developed a novel theory, Macromolecular Rate Theory (MMRT), which explains this trend due to heat capacity (CP) changes associated with enzymes. We applied MMRT to respiration data collected using a reciprocal transplant design with soils from three different sites across the U.S. Great Plains to isolate the effects of microbial community type from edaphic factors. We found that MMRT provided a better fit to the data than Arrhenius in 8 out of the 9 soil x inocula combinations. Our analysis revealed that the microbial communities have distinct CP values largely independent of soil type. These results have significant implications for fundamental understanding of microbial enzyme dynamics in soils as well as for ecosystem and global carbon modeling.

[Effects of tillage rotation and fertilization on soil aggregates and organic carbon content in corn field in Weibei Highland].

PubMed

Wang, Li; Li, Jun; Li, Juan; Bai, Wei-Xia

2014-03-01

A field experiment on effects of tillage rotation and fertilization on corn continuous cropping-practiced lands was carried out in Heyang of Shaanxi in 2007-2012. The tillage types included annual rotation of no-tillage and subsoiling (NT-ST), subsoiling and conventional tillage (ST-CT), or conventional tillage and no-tillage (CT-NT), and yearly practice of no tillage (NT-NT), subsoiling (ST-ST) or conventional tillage (CT-CT). The fertilization treatments included balanced fertilization, low-rate fertilization and conventional fertilization, which were separately practiced against the different tillage types. The experiment investigated compositions, mean mass diameters (MWD), geometrical mean diameters (GMD) and fraction dimension numbers (D) of soil aggregates in 0-40 cm soil and contents of organic carbon in 0-60 cm soil. The results indicated that: 1) The increased tillage intensity caused the reduced mechanical stability and content of soil aggregates and increased soil organic carbon loss. No-tillage or tillage rotation increased the MWD, GMD and contents of soil organic carbon and soil aggregates with diameters of more than 0.25 mm, but decreased D. Under the same fertilization treatment, the contents of soil aggregates with diameters of more than 0.25 mm were ranked in the order of NT-NT>NT-ST>NT-CT>ST-ST>CT-ST>CT-CT, and under the same tillage rotations, the soil aggregates were more stable with the balanced or low- rate fertilization than with the conventional fertilization. 2) Mathematical fractal dimension fitting of soil aggregates indicated that the fractal dimension numbers of soil aggregates ranged within 2.247-2.681 by dry sieving and 2.897-2.976 by wet sieving. In 0-30 cm soil, the fractal dimension numbers of soil aggregates were significantly lower under no-tillage or tillage rotation than under conventional tillage, and in 0-40 cm soil, the fractal dimensions of soil aggregates increased with soil depth, and tended to stabilize at the soil depth of 40 cm. 3) The different fertilization treatments exerted significantly different influences on the contents of soil organic carbon (P < 0.05), which tended to decline with soil depth. Compared to the conventional fertilization, the balanced fertilization increased the content of soil organic carbon by 6.9%, and the contents of soil organic carbon increased as the diameters of soil aggregates increased. The correlation analysis showed that the contents of soil aggregates with diameters of 0.25-2 mm significantly affected the content of soil organic carbon, with the coefficient of determination being 0.848 (P < 0.01).

Rainfall simulation in education

NASA Astrophysics Data System (ADS)

Peters, Piet; Baartman, Jantiene; Gooren, Harm; Keesstra, Saskia

2016-04-01

Rainfall simulation has become an important method for the assessment of soil erosion and soil hydrological processes. For students, rainfall simulation offers an year-round, attractive and active way of experiencing water erosion, while not being dependent on (outdoors) weather conditions. Moreover, using rainfall simulation devices, they can play around with different conditions, including rainfall duration, intensity, soil type, soil cover, soil and water conservation measures, etc. and evaluate their effect on erosion and sediment transport. Rainfall simulators differ in design and scale. At Wageningen University, both BSc and MSc student of the curriculum 'International Land and Water Management' work with different types of rainfall simulation devices in three courses: - A mini rainfall simulator (0.0625m2) is used in the BSc level course 'Introduction to Land Degradation and Remediation'. Groups of students take the mini rainfall simulator with them to a nearby field location and test it for different soil types, varying from clay to more sandy, slope angles and vegetation or litter cover. The groups decide among themselves which factors they want to test and they compare their results and discuss advantage and disadvantage of the mini-rainfall simulator. - A medium sized rainfall simulator (0.238 m2) is used in the MSc level course 'Sustainable Land and Water Management', which is a field practical in Eastern Spain. In this course, a group of students has to develop their own research project and design their field measurement campaign using the transportable rainfall simulator. - Wageningen University has its own large rainfall simulation laboratory, in which a 15 m2 rainfall simulation facility is available for research. In the BSc level course 'Land and Water Engineering' Student groups will build slopes in the rainfall simulator in specially prepared containers. Aim is to experience the behaviour of different soil types or slope angles when (heavy) rain occurs. The MSc level course 'Fundamentals of Land Management' students carry out a hands-on practical in which they compare soil type and design and evaluate the effect of soil and water conservation measures. Also, MSc thesis research is being carried out using this facility. For instance, the distribution and movement of pesticide Glyphosate with sediment transportation was being quantified using the rainfall simulation facility.

Calcic soils and calcretes in the southwestern United States

USGS Publications Warehouse

Bachman, George Odell; Machette, Michael N.

1977-01-01

Secondary calcium carbonate of diverse origins, 'caliche' of many authors, is widespread in the southwestern United States. 'Caliche' includes various carbonates such as calcic soils and products of groundwater cementation. The term 'caliche' is generally avoided in this report in favor of such terms as calcrete, calcic soils, and pervasively cemented deposits. Criteria for the recognition of various types of calcrete of diverse origins include field relations and laboratory data. Calcic soils provide a comprehensive set of characteristics that aid in their recognition in the field. These characteristics include a distinctive morphology that is zoned horizontally and can frequently be traced over tens to hundreds of square kilometers. The major process in the formation of pedogenic calcrete and calic soils is the leaching of calcium carbonate from upper soil horizons by downward percolating soil solutions and reprecipitation of the carbonate in alluvial horizons near the base of the soil profile. The formation of pedogenic calcrete involves many factors including climate, source of carbonate, and tectonic stability of the geomorphic surface on which the calcrete is deposited. Most of the carbonate in pedogenic calcrete is probably derived from windblown sand, dust, and rain. Calcic soils and pedogenic calcretes follow a six-stage sequence morphologic development and is based on a classification devised by Gile, Peterson and Grossman in 1966. The .six morphologic stages of carbonate deposition in soils are related to the relative age of the soil and are as follows: I. The first or youngest stage includes filamentous or faint coatings of carbonate on detrital grains. II. The second stage includes pebble coatings which are continuous; firm carbonate nodules are few to common. III. The third stage includes coalesced nodules which occur in a friable or disseminated carbonate matrix. IV. The fourth stage includes platy, firmly cemented matrix which engulfs nodules; horizon is plugged to downward moving solutions. V. The fifth stage includes soils which are platy to tabular, dense, strongly cemented. A well-developed laminar layer occurs on the upper surface. VI. The sixth and most advanced stage is massive, multilaminar, and strongly cemented calcrete with abundant pisoliths, the upper surface of which may be brecciated. Pisoliths may indicate many generations of brecciation and reformation. In general calcic soils include stages I through III and are friable to moderately indurated; whereas pedogenic calcretes include stages IV through VI and are dense and strongly indurated. In a single pedon the morphologic stage of carbonate deposition decreases downward in the profile. The stage of development may be used in local regions for correlation and determination of relative ages of soils and geomorphic surfaces. Some structures observed in pedogenic calcretes may be present in other types of calcrete but the horizontal zonation typical of deposits of soil processes is absent. Laminar structure in particular is not restricted to pedogenic deposits and is common in many varieties of calcrete. Very little chemical change occurs in the noncalcareous nonclayey fractions of calcretes with age; but clay minerals within calcretes undergo a complex history of authigenesis. There is a depletion of magnesium in the calcareous portion and an enrichment of magnesium in the clayey portion of a calcrete with age. In keeping with this relationship, montmorillonite, or mixed layer montmorillonite-illite, is common in younger calcretes; whereas the high magnesium-silicate clays, sepiolite and palygorskite, are common in older calcretes. This indicates that the magnesium depleted from the carbonate is redistributed authigenically in clay minerals. The mobility of carbonate introduces many problems in attempts to date calcretes directly. Although the relative ages of soils within a province may be determined by quant

Combined effects of climate, restoration measures and slope position in change in soil chemical properties and nutrient loss across lands affected by the Wenchuan Earthquake in China.

PubMed

Lin, Yongming; Deng, Haojun; Du, Kun; Rafay, Loretta; Zhang, Guang-Shuai; Li, Jian; Chen, Can; Wu, Chengzhen; Lin, Han; Yu, Wei; Fan, Hailan; Ge, Yonggang

2017-10-15

The MS 8.0Wenchuan Earthquake in 2008 caused huge damage to land cover in the northwest of China's Sichuan province. In order to determine the nutrient loss and short term characteristics of change in soil chemical properties, we established an experiment with three treatments ('undestroyed', 'destroyed and treated', and 'destroyed and untreated'), two climate types (semi-arid hot climate and subtropical monsoon climate), and three slope positions (upslope, mid-slope, and bottom-slope) in 2011. Ten soil properties-including pH, organic carbon, total nitrogen, total phosphorus, total potassium, Ca 2+ , Mg 2+ , alkaline hydrolysable nitrogen, available phosphorus, and available potassium-were measured in surface soil samples in December 2014. Analyses were performed to compare the characteristics of 3-year change in soil chemical properties in two climate zones. This study revealed that soil organic carbon, total nitrogen, Ca 2+ content, alkaline hydrolysable nitrogen, available phosphorus, and available potassium were significantly higher in subtropical monsoon climate zones than in semi-arid hot climate zones. However, subtropical monsoon climate zones had a higher decrease in soil organic carbon, total nitrogen, total phosphorus, total potassium, and alkaline hydrolysable nitrogen in 'destroyed and untreated' sites than in semi-arid hot climate zones. Most soil chemical properties exhibited significant interactions, indicating that they may degrade or develop concomitantly. 'Destroyed and treated' sites in both climate types had lower C:P and N:P ratios than 'destroyed and untreated' sites. Principal component analysis (PCA) showed that the first, second, and third principal components explained 76.53% of the variation and might be interpreted as structural integrity, nutrient supply availability, and efficiency of soil; the difference of soil parent material; as well as weathering and leaching effects. Our study indicated that the characteristics of short term change in soil properties were affected by climate types and treatments, but not slope positions. Our results provide useful information for the selection of restoration countermeasures in different climate types to facilitate ecological restoration and reconstruction strategies in earthquake-affected areas. Copyright © 2017 Elsevier B.V. All rights reserved.

Bioremediation of petroleum-contaminated soil: A Review

NASA Astrophysics Data System (ADS)

Yuniati, M. D.

2018-02-01

Petroleum is the major source of energy for various industries and daily life. Releasing petroleum into the environment whether accidentally or due to human activities is a main cause of soil pollution. Soil contaminated with petroleum has a serious hazard to human health and causes environmental problems as well. Petroleum pollutants, mainly hydrocarbon, are classified as priority pollutants. The application of microorganisms or microbial processes to remove or degrade contaminants from soil is called bioremediation. This microbiological decontamination is claimed to be an efficient, economic and versatile alternative to physicochemical treatment. This article presents an overview about bioremediation of petroleum-contaminated soil. It also includes an explanation about the types of bioremediation technologies as well as the processes.

The tri-soil experiment: do plants discriminate among vegetation soil types?

USDA-ARS?s Scientific Manuscript database

We tested if rooting mass and root nutrient uptake of cheatgrass (Bromus tectorum) or creeping wildrye (Leymus triticoides) were influenced by vegetation soil type. Three soil types (A horizons), similar in gross physical and chemical properties, were freshly-collected. The soils varied in the veget...

Local and distal effects of arbuscular mycorrhizal colonization on direct pathway Pi uptake and root growth in Medicago truncatula

PubMed Central

Watts-Williams, Stephanie J.; Jakobsen, Iver; Cavagnaro, Timothy R.; Grønlund, Mette

2015-01-01

Two pathways exist for plant Pi uptake from soil: via root epidermal cells (direct pathway) or via associations with arbuscular mycorrhizal (AM) fungi, and the two pathways interact in a complex manner. This study investigated distal and local effects of AM colonization on direct root Pi uptake and root growth, at different soil P levels. Medicago truncatula was grown at three soil P levels in split-pots with or without AM fungal inoculation and where one root half grew into soil labelled with 33P. Plant genotypes included the A17 wild type and the mtpt4 mutant. The mtpt4 mutant, colonized by AM fungi, but with no functional mycorrhizal pathway for Pi uptake, was included to better understand effects of AM colonization per se. Colonization by AM fungi decreased expression of direct Pi transporter genes locally, but not distally in the wild type. In mtpt4 mutant plants, direct Pi transporter genes and the Pi starvation-induced gene Mt4 were more highly expressed than in wild-type roots. In wild-type plants, less Pi was taken up via the direct pathway by non-colonized roots when the other root half was colonized by AM fungi, compared with non-mycorrhizal plants. Colonization by AM fungi strongly influenced root growth locally and distally, and direct root Pi uptake activity locally, but had only a weak influence on distal direct pathway activity. The responses to AM colonization in the mtpt4 mutant suggested that in the wild type, the increased P concentration of colonized roots was a major factor driving the effects of AM colonization on direct root Pi uptake. PMID:25944927

Effectiveness of mineral soil to adsorb the natural occurring radioactive material (norm), uranium and thorium

NASA Astrophysics Data System (ADS)

Amir, Muhammad Nur Iman; Ismail, Nurul Izzatiafifi; Wood, Ab. Khalik; Saat, Ahmad; Hamzah, Zaini

2015-04-01

A study has been performed on U-soil and Th-soil adsorption of three types of soil collected from Selangor State of Malaysia which are Saujana Putra, Bukit Changgang and Jenderam Hilir. In this study, natural radionuclide (U and Th) soil adsorption based on batch experiments with various initial concentrations of the radionuclide elements were carried out. Parameters that were set constant include pH at 5;amount of soil used was 5 g each, contact time was 24 hour and different initial concentration for each solution of U and Th which is 5 mg/L, 10 mg/L, 15 mg/L, 20 mg/L, 25 mg/L and 40 mg/L were used. The Kd values for each type of soil were determined in this batch experiments which was based on US-EPA method, in order to estimate adsorption capacity of the soil.The Kd values of Th found higher than Kd values of U for all of the soil samples, and the highest was found on the soil collected from Bukit Changgang. The soil clay content was one of factors to influence the adsorption of both U and Th from dilute initial solution. The U-soil and Th-soil adsorption process for all the soil samples studied are generally obeying unimolecular layer Langmuir isotherm model. From Langmuir isotherm, the maximum adsorption capacity for U was 0.393mg/g and for Th was 1.53 mg/g for the soil that was taken from Bukit Changgang. From the study, it suggested that the soil from Bukit Changgang applicable as potential enhanced barrier for site disposing waste containing U and Th.

Effectiveness of mineral soil to adsorb the natural occurring radioactive material (norm), uranium and thorium

DOE Office of Scientific and Technical Information (OSTI.GOV)

Amir, Muhammad Nur Iman; Ismail, Nurul Izzatiafifi; Wood, Ab. Khalik, E-mail: khalik@salam.uitm.edu.my

2015-04-29

A study has been performed on U-soil and Th-soil adsorption of three types of soil collected from Selangor State of Malaysia which are Saujana Putra, Bukit Changgang and Jenderam Hilir. In this study, natural radionuclide (U and Th) soil adsorption based on batch experiments with various initial concentrations of the radionuclide elements were carried out. Parameters that were set constant include pH at 5;amount of soil used was 5 g each, contact time was 24 hour and different initial concentration for each solution of U and Th which is 5 mg/L, 10 mg/L, 15 mg/L, 20 mg/L, 25 mg/L and 40 mg/L were used. The K{sub d}more » values for each type of soil were determined in this batch experiments which was based on US-EPA method, in order to estimate adsorption capacity of the soil.The K{sub d} values of Th found higher than Kd values of U for all of the soil samples, and the highest was found on the soil collected from Bukit Changgang. The soil clay content was one of factors to influence the adsorption of both U and Th from dilute initial solution. The U-soil and Th-soil adsorption process for all the soil samples studied are generally obeying unimolecular layer Langmuir isotherm model. From Langmuir isotherm, the maximum adsorption capacity for U was 0.393mg/g and for Th was 1.53 mg/g for the soil that was taken from Bukit Changgang. From the study, it suggested that the soil from Bukit Changgang applicable as potential enhanced barrier for site disposing waste containing U and Th.« less

Changes in Fire-Derived Soil Black Carbon Storage in a Sub-humid Woodland

NASA Astrophysics Data System (ADS)

White, J. D.; Yao, J.; Murray, D. B.; Hockaday, W. C.

2014-12-01

Fire-derived black carbon (BC) in soil, including charcoal, represents a potentially important fraction of terrestrial carbon cycling due to its presumed long persistence in soil. Interpretation of site BC retention is important for assessing feedbacks to ecosystem processes including nutrient and water cycling. However, interaction between vegetation disturbance, BC formation, and off site transport may exist that complicate interpretation of BC addition to soils from wildfire or prescribed burns directly. To investigate the relationship between disturbance and site retention on soil BC, we determined BC concentrations for a woodland in central Texas, USA, from study plots in hilly terrain with a fire scar dendrochronology spanning 100 years. BC values were determined from 13C nuclear magnetic resonance (NMR) spectroscopy. Estimated values showed mean BC concentration of 2.73 ± 3.06 g BC kg-1 (0.91 ± 0.51 kg BC m-2) for sites with fire occurrence within the last 40 years compared with BC values of1.21 ± 1.70 g BC kg-1 soil (0.18 ± 0.14 kg BC m-2) for sites with fire 40 - 100 years ago. Sites with no tree ring evidence of fire during the last 100 years had the lowest mean soil BC concentration of 0.05 ± 0.11 g BC kg-1 (0.02 ± 0.03 kg BC m-2). Molecular proxies of stability (lignin/N) and decomposition (Alkyl C/O-Alky C) showed no differences across the sites, indicating that low potential for BC mineralization. Modeled soil erosion and time since fire from fire scar data showed that soil BC concentrations were inversely correlated. A modified the ecosystem process model, Biome-BGC, was also used simulate the effects of fire disturbance with different severities and seasonality on C cycling related to the BC production, effect on soil water availability, and off-site transport. Results showed that BC impacts on ecosystem processes, including net ecosystem exchange and leaf area development, were predominantly related to fire frequency. Site BC loss rates were affected by initial slope-affected erosion, fire severity, vegetation type, and rate of vegetation recovery. The simulation results showed that fire types, such as high severity, was generally associated with low site BC retention related to low vertical transfer of BC into soils, buoyancy of BC particles, and surface runoff from unvegetated soils.

Spatial and seasonal variations in mercury methylation and microbial community structure in a historic mercury mining area, Yolo County, California

USGS Publications Warehouse

Holloway, J.M.; Goldhaber, M.B.; Scow, K.M.; Drenovsky, R.E.

2009-01-01

The relationships between soil parent lithology, nutrient concentrations, microbial biomass and community structure were evaluated in soils from a small watershed impacted by historic Hg mining. Upland and wetland soils, stream sediments and tailings were collected and analyzed for nutrients (DOC, SO4=, NO3-), Hg, MeHg, and phospholipid fatty acids (PLFA). Stream sediment was derived from serpentinite, siltstone, volcanic rocks and mineralized serpentine with cinnabar, metacinnabar and other Hg phases. Soils from different parent materials had distinct PLFA biomass and community structures that are related to nutrient concentrations and toxicity effects of trace metals including Hg. The formation of MeHg appears to be most strongly linked to soil moisture, which in turn has a correlative relationship with PLFA biomass in wetland soils. The greatest concentrations of MeHg (> 0.5??ng g- 1 MeHg) were measured in wetland soils and soil with a volcanic parent (9.5-37????g g- 1 Hg). Mercury methylation was associated with sulfate-reducing bacteria, including Desulfobacter sp. and Desulfovibrio sp., although these organisms are not exclusively responsible for Hg methylation. Statistical models of the data demonstrated that soil microbial communities varied more with soil type than with season.

Alteration of soil microbial communities and water quality in restored wetlands

USGS Publications Warehouse

Bossio, D.A.; Fleck, J.A.; Scow, K.M.; Fujii, R.

2006-01-01

Land usage is a strong determinant of soil microbial community composition and activity, which in turn determine organic matter decomposition rates and decomposition products in soils. Microbial communities in permanently flooded wetlands, such as those created by wetland restoration on Sacramento-San Joaquin Delta islands in California, function under restricted aeration conditions that result in increasing anaerobiosis with depth. It was hypothesized that the change from agricultural management to permanently flooded wetland would alter microbial community composition, increase the amount and reactivity of dissolved organic carbon (DOC) compounds in Delta waters; and have a predominant impact on microbial communities as compared with the effects of other environmental factors including soil type and agricultural management. Based on phospholipid fatty acid (PLFA) analysis, active microbial communities of the restored wetlands were changed significantly from those of the agricultural fields, and wetland microbial communities varied widely with soil depth. The relative abundance of monounsaturated fatty acids decreased with increasing soil depth in both wetland and agricultural profiles, whereas branched fatty acids were relatively more abundant at all soil depths in wetlands as compared to agricultural fields. Decomposition conditions were linked to DOC quantity and quality using fatty acid functional groups to conclude that restricted aeration conditions found in the wetlands were strongly related to production of reactive carbon compounds. But current vegetation may have had an equally important role in determining DOC quality in restored wetlands. In a larger scale analysis, that included data from wetland and agricultural sites on Delta islands and data from two previous studies from the Sacramento Valley, an aeration gradient was defined as the predominant determinant of active microbial communities across soil types and land usage. ?? 2005 Elsevier Ltd. All rights reserved.

S-World: A high resolution global soil database for simulation modelling (Invited)

NASA Astrophysics Data System (ADS)

Stoorvogel, J. J.

2013-12-01

There is an increasing call for high resolution soil information at the global level. A good example for such a call is the Global Gridded Crop Model Intercomparison carried out within AgMIP. While local studies can make use of surveying techniques to collect additional techniques this is practically impossible at the global level. It is therefore important to rely on legacy data like the Harmonized World Soil Database. Several efforts do exist that aim at the development of global gridded soil property databases. These estimates of the variation of soil properties can be used to assess e.g., global soil carbon stocks. However, they do not allow for simulation runs with e.g., crop growth simulation models as these models require a description of the entire pedon rather than a few soil properties. This study provides the required quantitative description of pedons at a 1 km resolution for simulation modelling. It uses the Harmonized World Soil Database (HWSD) for the spatial distribution of soil types, the ISRIC-WISE soil profile database to derive information on soil properties per soil type, and a range of co-variables on topography, climate, and land cover to further disaggregate the available data. The methodology aims to take stock of these available data. The soil database is developed in five main steps. Step 1: All 148 soil types are ordered on the basis of their expected topographic position using e.g., drainage, salinization, and pedogenesis. Using the topographic ordering and combining the HWSD with a digital elevation model allows for the spatial disaggregation of the composite soil units. This results in a new soil map with homogeneous soil units. Step 2: The ranges of major soil properties for the topsoil and subsoil of each of the 148 soil types are derived from the ISRIC-WISE soil profile database. Step 3: A model of soil formation is developed that focuses on the basic conceptual question where we are within the range of a particular soil property at a particular location given a specific soil type. The soil properties are predicted for each grid cell based on the soil type, the corresponding ranges of soil properties, and the co-variables. Step 4: Standard depth profiles are developed for each of the soil types using the diagnostic criteria of the soil types and soil profile information from the ISRIC-WISE database. The standard soil profiles are combined with the the predicted values for the topsoil and subsoil yielding unique soil profiles at each location. Step 5: In a final step, additional soil properties are added to the database using averages for the soil types and pedo-transfer functions. The methodology, denominated S-World (Soils of the World), results in readily available global maps with quantitative pedon data for modelling purposes. It forms the basis for the Global Gridded Crop Model Intercomparison carried out within AgMIP.

Impacts of LUCC on soil properties in the riparian zones of desert oasis with remote sensing data: a case study of the middle Heihe River basin, China.

PubMed

Jiang, Penghui; Cheng, Liang; Li, Manchun; Zhao, Ruifeng; Duan, Yuewei

2015-02-15

Large-scale changes in land use and land cover over long timescales can induce significant variations in soil physicochemical properties, particularly in the riparian zones of arid regions. Frequent reclamation of wetlands and grasslands and intensive agricultural activity have induced significant changes in both land use/cover and soil physicochemical properties in the riparian zones of the middle Heihe River basin of China. The present study aims to explore whether land use/land cover change (LUCC) can well explain the variations in soil properties in the riparian zones of the middle Heihe River basin. To achieve this, we mapped LUCC and quantified the type of land use change using remote sensing images, topographic maps, and GIS analysis techniques. Forty-two sites were selected for soil and vegetation sampling. Then, physical and chemical experiments were employed to determine soil moisture, soil bulk density, soil pH, soil organic carbon, total nitrogen, total potassium, total phosphorous, available nitrogen, available potassium, and available phosphorous. The Independent-Samples Kruskal-Wallis Test, principal component analysis, and a scatter matrix were used to analyze the effects of LUCC on soil properties. The results indicate that the majority of the parameters investigated were affected significantly by LUCC. In particular, soil moisture and soil organic carbon can be explained well by land cover change and land use change, respectively. Furthermore, changes in soil moisture could be attributed primarily to land cover changes. Changes in soil organic carbon were correlated closely with the following land use change types: wetlands-arable, forest-grasslands, and grasslands-desert. Other parameters, including pH and total K, were also found to exhibit significant correlations with LUCC. However, changes in soil nutrients were shown to be induced most probably by human agricultural activity (i.e. fertilize, irrigation, tillage, etc.), rather than by simple conversions from one land use/cover types to the others. Copyright © 2014 Elsevier B.V. All rights reserved.

NASA Cold Land Processes Experiment (CLPX 2002/03): Field measurements of snowpack properties and soil moisture

Treesearch

Kelly Elder; Don Cline; Glen E. Liston; Richard Armstrong

2009-01-01

A field measurement program was undertaken as part NASA's Cold Land Processes Experiment (CLPX). Extensive snowpack and soil measurements were taken at field sites in Colorado over four study periods during the two study years (2002 and 2003). Measurements included snow depth, density, temperature, grain type and size, surface wetness, surface roughness, and...

Environmental Assessment: Disposition of Chiefs’ Circle Residential Structures

DTIC Science & Technology

2012-04-27

the restrooms and kitchen when being used by the CFC and Scouts, respectively. Final - Environmental Assessment...Solid waste (not hazardous waste) associated with the Proposed Action Site includes waste such as kitchen waste, paper, plastics, metal and glass...specific soil groups (hydraquents and udor- thents), and four urban land complexes. The acreage covered by each soil type and its percentage of the

Geophagy in Northern Uganda: Perspectives from Consumers and Clinicians

PubMed Central

Huebl, Lena; Leick, Stephan; Guettl, Lukas; Akello, Grace; Kutalek, Ruth

2016-01-01

The etiology and health consequences of geophagy are still poorly understood. The consumed soil, individual motives, consumption habits, and the clinical perspective of geophagy in northern Uganda were examined. A total of 50 semistructured interviews (17 pregnant, eight nonpregnant women, 10 men, and 15 health-care professionals) were conducted. Our results suggest that geophagy is not limited to pregnancy and can also be found among nonpregnant women and men. During gestation, excessive amounts of various soil types are consumed and can replace food at times. Nonpregnant women and men consume less soil and stick to one type. When pregnant, craving and alleviating gastrointestinal upset are the main motives. In men, the main reasons for geophagy were craving, hypersalivation, and natural stimulants. If soil is craved, it can show similarities to a dependency syndrome. When picked up in childhood, geophagy is more likely to be continued throughout life. The consumption habits differ and thereby vary in their possible implications on health. Our findings suggest that men should be included in further studies. Especially nurses from the antenatal care are exposed to geophagists; however, no national guidelines exist for geophagy. Further research is necessary to create guidelines to be included in medical training and practice. PMID:27698274

The influence of soil type and altered lignin biosynthesis on the physiology, growth and carbon allocation in Populus tremuloides

Treesearch

Jessica E. Hancock; Kate L. Bradley; Christian P. Giardina; Kurt S. Pregitzer

2008-01-01

Plants influence soil carbon (C) formation through the quality and quantity of C released to soil. Soil type, in turn can modify a plant's influence on soil through effects on plant production, tissue quality and regulation of soil C decomposition and stabilization. Wild-type aspen and three transgenic aspen lines expressing reduced stem lignin concentrations and/...

Considering the spatial-scale factor when modelling sustainable land management.

NASA Astrophysics Data System (ADS)

Bouma, Johan

2015-04-01

Considering the spatial-scale factor when modelling sustainable land management. J.Bouma Em.prof. soil science, Wageningen University, Netherlands. Modelling soil-plant processes is a necessity when exploring future effects of climate change and innovative soil management on agricultural productivity. Soil data are needed to run models and traditional soil maps and the associated databases (based on various soil Taxonomies ), have widely been applied to provide such data obtained at "representative" points in the field. Pedotransferfunctions (PTF)are used to feed simulation models, statistically relating soil survey data ( obtained at a given point in the landscape) to physical parameters for simulation, thus providing a link with soil functionality. Soil science has a basic problem: their object of study is invisible. Only point data are obtained by augering or in pits. Only occasionally roadcuts provide a better view. Extrapolating point to area data is essential for all applications and presents a basic problem for soil science, because mapping units on soil maps, named for a given soil type,may also contain other soil types and quantitative information about the composition of soil map units is usually not available. For detailed work at farm level ( 1:5000-1:10000), an alternative procedure is proposed. Based on a geostatistical analysis, onsite soil observations are made in a grid pattern with spacings based on a geostatistical analysis. Multi-year simulations are made for each point of the functional properties that are relevant for the case being studied, such as the moisture supply capacity, nitrate leaching etc. under standardized boundary conditions to allow comparisons. Functional spatial units are derived next by aggregating functional point data. These units, which have successfully functioned as the basis for precision agriculture, do not necessarily correspond with Taxonomic units but when they do the Taxonomic names should be noted . At lower landscape and watershed scale ( 1:25.000 -1:50000) digital soil mapping can provide soil data for small grids that can be used for modeling, again through pedotransferfunctions. There is a risk, however, that digital mapping results in an isolated series of projects that don't increase the knowledge base on soil functionality, e.g.linking Taxonomic names ( such as soil series) to functionality, allowing predictions of soil behavior at new sites where certain soil series occur. We therefore suggest that aside from collecting 13 soil characteristics for each grid, as occurs in digital soil mapping, also the Taxonomic name of the representative soil in the grid is recorded. At spatial scales of 1:50000 and smaller, use of Taxonomic names becomes ever more attractive because at such small scales relations between soil types and landscape features become more pronounced. But in all cases, selection of procedures should not be science-based but based on the type of questions being asked including their level of generalization. These questions are quite different at the different spatial-scale levels and so should be the procedures.

Evolving soils and hydrologic connectivity in semiarid hillslopes

NASA Astrophysics Data System (ADS)

Saco, Patricia M.

2015-04-01

Soil moisture availability is essential for the stability and resilience of semiarid ecosystems. In these ecosystems the amount of soil moisture available for vegetation growth and survival is intrinsically related to the way water is redistributed, that is from source to sink areas, and therefore prescribed by the hydrologic connectivity of the landscape. Recent studies have shown that hydrologic connectivity is highly dynamic and linked to the coevolution of geomorphic, soil and vegetation structures at a variety of spatial and temporal scales. This study investigates the effect of evolving soil depths on hydrologic connectivity using a modelling framework. The focus is on Australian semiarid hillslopes with patterned vegetation that result from coevolving landforms, soils, water redistribution, and vegetation patterns. We present and analyse results from simulations using a coupled landform evolution-dynamic vegetation model, which includes a soil depth evolution module and accounts for soil production and sediment erosion and deposition processes. We analyse the effect of soils depths on surface connectivity for a range of biotic (plant functional type strategies) and abiotic (slope and erodibility) conditions. The analysis shows that different plant functional types, through their varying facilitation strategies, have a profound effect on soils depths and therefore affect hydrologic connectivity and soil moisture patterns. This interplay becomes particularly important for systems that coevolve to have very shallow soils. In this case soil depth becomes the key factor prescribing surface connectivity and available soil moisture for plants, which affect the recovery of the system after disturbance. Conditions for the existence of threshold behaviour for which small perturbations can trigger a sudden increase in hydrologic connectivity, reduced soil moisture availability and decrease in productivity leading to degraded states are investigated. Critical implications for effective restoration efforts are discussed.

General Relationships between Abiotic Soil Properties and Soil Biota across Spatial Scales and Different Land-Use Types

PubMed Central

Birkhofer, Klaus; Schöning, Ingo; Alt, Fabian; Herold, Nadine; Klarner, Bernhard; Maraun, Mark; Marhan, Sven; Oelmann, Yvonne; Wubet, Tesfaye; Yurkov, Andrey; Begerow, Dominik; Berner, Doreen; Buscot, François; Daniel, Rolf; Diekötter, Tim; Ehnes, Roswitha B.; Erdmann, Georgia; Fischer, Christiane; Foesel, Bärbel; Groh, Janine; Gutknecht, Jessica; Kandeler, Ellen; Lang, Christa; Lohaus, Gertrud; Meyer, Annabel; Nacke, Heiko; Näther, Astrid; Overmann, Jörg; Polle, Andrea; Pollierer, Melanie M.; Scheu, Stefan; Schloter, Michael; Schulze, Ernst-Detlef; Schulze, Waltraud; Weinert, Jan; Weisser, Wolfgang W.; Wolters, Volkmar; Schrumpf, Marion

2012-01-01

Very few principles have been unraveled that explain the relationship between soil properties and soil biota across large spatial scales and different land-use types. Here, we seek these general relationships using data from 52 differently managed grassland and forest soils in three study regions spanning a latitudinal gradient in Germany. We hypothesize that, after extraction of variation that is explained by location and land-use type, soil properties still explain significant proportions of variation in the abundance and diversity of soil biota. If the relationships between predictors and soil organisms were analyzed individually for each predictor group, soil properties explained the highest amount of variation in soil biota abundance and diversity, followed by land-use type and sampling location. After extraction of variation that originated from location or land-use, abiotic soil properties explained significant amounts of variation in fungal, meso- and macrofauna, but not in yeast or bacterial biomass or diversity. Nitrate or nitrogen concentration and fungal biomass were positively related, but nitrate concentration was negatively related to the abundances of Collembola and mites and to the myriapod species richness across a range of forest and grassland soils. The species richness of earthworms was positively correlated with clay content of soils independent of sample location and land-use type. Our study indicates that after accounting for heterogeneity resulting from large scale differences among sampling locations and land-use types, soil properties still explain significant proportions of variation in fungal and soil fauna abundance or diversity. However, soil biota was also related to processes that act at larger spatial scales and bacteria or soil yeasts only showed weak relationships to soil properties. We therefore argue that more general relationships between soil properties and soil biota can only be derived from future studies that consider larger spatial scales and different land-use types. PMID:22937029

Differences in hydrological responses for different vegetation types on a steep slope on the Loess Plateau, China

NASA Astrophysics Data System (ADS)

Duan, Liangxia; Huang, Mingbin; Zhang, Luodan

2016-06-01

Extensive vegetation restoration practices have been implemented to control soil erosion on the Loess Plateau, China. However, no strict guidelines are available to determine the most suitable plant species for vegetation restoration within a given area. The objective of this study was to quantify the changes of each component (soil water storage, surface runoff, and actual evapotranspiration) of a water balance model and soil loss over time under eight different vegetation types, and to further determine the optimal vegetation type for soil and water conservation and sustainable ecological restoration on the steep slopes (>25°) on the Loess Plateau. The results indicated that vegetation type substantially affected soil water storage and that the greatest soil water storage in both the shallow (0-2 m) and the deep soil layers (2-5 m) occurred under Bothriochloa ischaemum L. (BOI). Vegetation type also affected surface runoff and soil losses. The most effective vegetation types for reducing soil erosion were BOI and Sea-buckthorn (Hippophae rhamnoides L.), while Chinese pine (Pinus tabulaeformis Carr.) and Chinese pine + Black locust (Robinia pseudoacacia L.) were the most ineffective types. Soil water dynamics and evapotranspiration varied considerably among the different vegetation types. A soil water surplus was only found under BOI, while insufficient water replenishment existed under the other seven vegetation types. The higher water consumption rates of the seven vegetation types could result in soil desiccation, which could lead to severe water stresses that would adversely affect plant growth. This study suggested that both vegetation type and its effect on controlling soil erosion should be considered when implementing vegetation restoration and that BOI should be highly recommended for vegetation restoration on the steep slopes of the Loess Plateau. A similar approach to the one used in this study could be applied to other regions of the world confronted by the same problems of water scarcity along with the need for vegetation restoration.

Optimization of a sample processing protocol for recovery of Bacillus anthracis spores from soil

USGS Publications Warehouse

Silvestri, Erin E.; Feldhake, David; Griffin, Dale; Lisle, John T.; Nichols, Tonya L.; Shah, Sanjiv; Pemberton, A; Schaefer III, Frank W

2016-01-01

Following a release of Bacillus anthracis spores into the environment, there is a potential for lasting environmental contamination in soils. There is a need for detection protocols for B. anthracis in environmental matrices. However, identification of B. anthracis within a soil is a difficult task. Processing soil samples helps to remove debris, chemical components, and biological impurities that can interfere with microbiological detection. This study aimed to optimize a previously used indirect processing protocol, which included a series of washing and centrifugation steps. Optimization of the protocol included: identifying an ideal extraction diluent, variation in the number of wash steps, variation in the initial centrifugation speed, sonication and shaking mechanisms. The optimized protocol was demonstrated at two laboratories in order to evaluate the recovery of spores from loamy and sandy soils. The new protocol demonstrated an improved limit of detection for loamy and sandy soils over the non-optimized protocol with an approximate matrix limit of detection at 14 spores/g of soil. There were no significant differences overall between the two laboratories for either soil type, suggesting that the processing protocol will be robust enough to use at multiple laboratories while achieving comparable recoveries.

The sequential use of washing and an electrochemical reduction process for the remediation of lead-contaminated soils.

PubMed

Demir, Aydeniz; Köleli, Nurcan

2013-01-01

A two-step method for the remediation of three different types of lead (Pb)-contaminated soil was evaluated. The first step included soil washing with ethylenediaminetetraacetic acid (EDTA) to remove Pb from soils. The washing experiments were performed with 0.05 M Na2EDTA at 1:10 soil to liquid ratio. Following the washing, Pb removal efficiency from soils ranged within 50-70%. After the soil washing process, Pb2+ ions in the washing solution were reduced electrochemically in a fixed-bed reactor. Lead removal efficiency with the electrochemical reduction at -2.0 V potential ranged within 57-76%. The overall results indicate that this two-step method is an environmentally-friendly and effective technology to remediate Pb-contaminated soils, as well as Pb-contaminated wastewater treatment due to the transformation of toxic Pb2+ ions into a non-hazardous metallic form (Pb(0)).

Using Flux Site Observations to Calibrate Root System Architecture Stencils for Water Uptake of Plant Functional Types in Land Surface Models.

NASA Astrophysics Data System (ADS)

Bouda, M.

2017-12-01

Root system architecture (RSA) can significantly affect plant access to water, total transpiration, as well as its partitioning by soil depth, with implications for surface heat, water, and carbon budgets. Despite recent advances in land surface model (LSM) descriptions of plant hydraulics, RSA has not been included because of its three-dimensional complexity, which makes RSA modelling generally too computationally costly. This work builds upon the recently introduced "RSA stencil," a process-based 1D layered model that captures the dynamic shifts in water potential gradients of 3D RSA in response to heterogeneous soil moisture profiles. In validations using root systems calibrated to the rooting profiles of four plant functional types (PFT) of the Community Land Model, the RSA stencil predicts plant water potentials within 2% of the outputs of full 3D models, despite its trivial computational cost. In transient simulations, the RSA stencil yields improved predictions of water uptake and soil moisture profiles compared to a 1D model based on root fraction alone. Here I show how the RSA stencil can be calibrated to time-series observations of soil moisture and transpiration to yield a water uptake PFT definition for use in terrestrial models. This model-data integration exercise aims to improve LSM predictions of soil moisture dynamics and, under water-limiting conditions, surface fluxes. These improvements can be expected to significantly impact predictions of downstream variables, including surface fluxes, climate-vegetation feedbacks and soil nutrient cycling.

Soil-related variations in the population dynamics of six dipterocarp tree species with strong habitat preferences.

PubMed

Yamada, Toshihiro; Yamada, Yuko; Okuda, Toshinori; Fletcher, Christine

2013-07-01

Differences in the density of conspecific tree individuals in response to environmental gradients are well documented for many tree species, but how such density differences are generated and maintained is poorly understood. We examined the segregation of six dipterocarp species among three soil types in the Pasoh tropical forest, Malaysia. We examined how individual performance and population dynamics changed across the soil types using 10-year demographic data to compare tree performance across soil types, and constructed population matrix models to analyze the population dynamics. Species showed only minor changes in mortality and juvenile growth across soil types, although recruitment differed greatly. Clear, interspecific demographic trade-offs between growth and mortality were found in all soil types. The relative trade-offs by a species did not differ substantially among the soil types. Population sizes were projected to remain stable in all soil types for all species with one exception. Our life-table response experiment demonstrated that the population dynamics of a species differed only subtly among soil types. Therefore, species with strong density differences across soil types do not necessarily differ greatly in their population dynamics across the soil types. In contrast, interspecific differences in population dynamics were large. The trade-off between mortality and growth led to a negative correlation between the contributions of mortality and growth to variations in the population growth rate (λ) and thus reduced their net contributions. Recruitment had little impact on the variation in λ. The combination of these factors resulted in little variation in λ among species.

Types, harms and improvement of saline soil in Songnen Plain

NASA Astrophysics Data System (ADS)

Wang, Zhengjun; Zhuang, Jingjing; Zhao, Anping; Li, Xinxin

2018-03-01

Saline soil is an extremely difficult and modified soil, widely distributed around the world. According to UN-UNESCO and FAO, the world’s saline soil area is about 9.54×108hm2, and there is a growing trend, every year in 1.0×106-1.5×106hm2 speed growth, the effective utilization of land resources to the world is the most serious threat. The total area of saline-alkali land in China is about 9.91×107hm2, including the Songnen Plain, which is called one of the three major saline soil concentrations in the world. The Songnen plain is an important grain producing area in China, and the saline soil occupies most of the Songnen plain, so it is of great significance to study the saline soil and improvement in Songnen plain.

Cell-type specificity of lung cancer associated with low-dose soil heavy metal contamination in Taiwan: An ecological study

PubMed Central

2013-01-01

Background Numerous studies have examined the association between heavy metal contamination (including arsenic [As], cadmium [Cd], chromium [Cr], copper [Cu], mercury [Hg], nickel [Ni], lead [Pb], and zinc [Zn]) and lung cancer. However, data from previous studies on pathological cell types are limited, particularly regarding exposure to low-dose soil heavy metal contamination. The purpose of this study was to explore the association between soil heavy metal contamination and lung cancer incidence by specific cell type in Taiwan. Methods We conducted an ecological study and calculated the annual averages of eight soil heavy metals (i.e., As, Cd, Cr, Cu, Hg, Ni, Pb, and Zn) by using data from the Taiwan Environmental Protection Administration from1982 to 1986. The age-standardized incidence rates of lung cancer according to two major pathological types (adenocarcinoma [AC] and squamous cell carcinoma [SCC]) were obtained from the National Cancer Registry Program conducted in Taiwan from 2001 to 2005. A geographical information system was used to plot the maps of soil heavy metal concentration and lung cancer incidence rates. Poisson regression models were used to obtain the adjusted relative ratios (RR) and 95% confidence intervals (CI) for the lung cancer incidence associated with soil heavy metals. Results For males, the trend test for lung SCC incidence caused by exposure to Cr, Cu, Hg, Ni, and Zn showed a statistically significant dose–response relationship. However, for lung AC, only Cu and Ni had a significant dose–response relationship. As for females, those achieving a statistically significant dose–response relationship for the trend test were Cr (P = 0.02), Ni (P = 0.02), and Zn (P= 0.02) for lung SCC, and Cu (P < 0.01) and Zn (P = 0.02) for lung AC. Conclusion The current study suggests that a dose–response relationship exists between low-dose soil heavy metal concentration and lung cancer occurrence by specific cell-type; however, the relevant mechanism should be explored further. PMID:23575356

Differential effects of biochar on soils within an eroded field

NASA Astrophysics Data System (ADS)

Schumacher, Thomas; Chintala, Rajesh; Sandhu, Saroop; Kumar, Sandeep; Clay, Dave; Gelderman, Ron; Papiernik, Sharon; Malo, Douglas; Clay, Sharon; Julson, Jim

2015-04-01

Future uses of biochar will in part be dependent not only on the effects of biochar on soil processes but also on the availability and economics of biochar production. If pyrolysis for production of bio-oil and syngas becomes wide-spread, biochar as a by-product of bio-oil production will be widely available and relatively inexpensive compared to the production of biochar as primary product. Biochar produced as a by-product of optimized bio-oil production using regionally available feedstocks was examined for properties and for use as an amendment targeted to contrasting soils within an eroded field in an on-farm study initiated in 2013 at Brookings, South Dakota, USA. Three plant based biochar materials produced from carbon optimized gasification of corn stover (Zea mays L.), Ponderosa pine (Pinus ponderosa Lawson and C. Lawson) wood residue, and switchgrass (Panicum virgatum L.) were applied at a 1% (w/w) rate to a Maddock soil (Sandy, Mixed, Frigid Entic Hapludolls) located in an eroded upper landscape position and a Brookings soil (Fine-Silty, Mixed, Superactive, Frigid Pachic Hapludolls) located in a depositional landscape position. The cropping system within this agricultural landscape was a corn (Zea mays L.) and soybean (Glycine max L.) rotation. Biochar physical and chemical properties for each of the feedstocks were determined including pH, surface area, surface charge potential, C-distribution, ash content, macro and micro nutrient composition. Yields, nutrient content, and carbon isotope ratio measurements were made on the harvested seed. Soil physical properties measured included water retention, bulk density, and water infiltration from a ponded double ring infiltrometer. Laboratory studies were conducted to determine the effects of biochar on partitioning of nitrate and phosphorus at soil surface exchange complex and the extracellular enzymes activity of C and N cycles. Crop yields were increased only in the Maddock soil. Biochar interacted with each soil type to alter physical and chemical properties. However the pattern of interaction depended on soil and biochar type.

Device and method for producing a containment barrier underneath and around in-situ buried waste

DOEpatents

Gardner, Bradley M.; Smith, Ann M.; Hanson, Richard W.; Hodges, Richard T.

1998-01-01

An apparatus for building a horizontal underground barrier by cutting through soil and depositing a slurry, preferably on which cures into a hardened material. The apparatus includes a digging means for cutting and removing soil to create a void under the surface of the ground and injection means for inserting barrier-forming material into the void. In one embodiment, the digging means is a continuous cutting chain. Mounted on the continuous cutting chain are cutter teeth for cutting through soil and discharge paddles for removing the loosened soil. This invention includes a barrier placement machine, a method for building an underground horizontal containment barrier using the barrier placement machine, and the underground containment system. Preferably the underground containment barrier goes underneath and around the site to be contained in a bathtub-type containment.

Soil-plant transfer models for metals to improve soil screening value guidelines valid for São Paulo, Brazil.

PubMed

Dos Santos-Araujo, Sabrina N; Swartjes, Frank A; Versluijs, Kees W; Moreno, Fabio Netto; Alleoni, Luís R F

2017-11-07

In Brazil, there is a lack of combined soil-plant data attempting to explain the influence of specific climate, soil conditions, and crop management on heavy metal uptake and accumulation by plants. As a consequence, soil-plant relationships to be used in risk assessments or for derivation of soil screening values are not available. Our objective in this study was to develop empirical soil-plant models for Cd, Cu, Pb, Ni, and Zn, in order to derive appropriate soil screening values representative of humid tropical regions such as the state of São Paulo (SP), Brazil. Soil and plant samples from 25 vegetable species in the production areas of SP were collected. The concentrations of metals found in these soil samples were relatively low. Therefore, data from temperate regions were included in our study. The soil-plant relations derived had a good performance for SP conditions for 8 out of 10 combinations of metal and vegetable species. The bioconcentration factor (BCF) values for Cd, Cu, Ni, Pb, and Zn in lettuce and for Cd, Cu, Pb, and Zn in carrot were determined under three exposure scenarios at pH 5 and 6. The application of soil-plant models and the BCFs proposed in this study can be an important tool to derive national soil quality criteria. However, this methodological approach includes data assessed under different climatic conditions and soil types and need to be carefully considered.

The Soil Series in Soil Classifications of the United States

NASA Astrophysics Data System (ADS)

Indorante, Samuel; Beaudette, Dylan; Brevik, Eric C.

2014-05-01

Organized national soil survey began in the United States in 1899, with soil types as the units being mapped. The soil series concept was introduced into the U.S. soil survey in 1903 as a way to relate soils being mapped in one area to the soils of other areas. The original concept of a soil series was all soil types formed in the same parent materials that were of the same geologic age. However, within about 15 years soil series became the primary units being mapped in U.S. soil survey. Soil types became subdivisions of soil series, with the subdivisions based on changes in texture. As the soil series became the primary mapping unit the concept of what a soil series was also changed. Instead of being based on parent materials and geologic age, the soil series of the 1920s was based on the morphology and composition of the soil profile. Another major change in the concept of soil series occurred when U.S. Soil Taxonomy was released in 1975. Under Soil Taxonomy, the soil series subdivisions were based on the uses the soils might be put to, particularly their agricultural uses (Simonson, 1997). While the concept of the soil series has changed over the years, the term soil series has been the longest-lived term in U.S. soil classification. It has appeared in every official classification system used by the U.S. soil survey (Brevik and Hartemink, 2013). The first classification system was put together by Milton Whitney in 1909 and had soil series at its second lowest level, with soil type at the lowest level. The second classification system used by the U.S. soil survey was developed by C.F. Marbut, H.H. Bennett, J.E. Lapham, and M.H. Lapham in 1913. It had soil series at the second highest level, with soil classes and soil types at more detailed levels. This was followed by another system in 1938 developed by M. Baldwin, C.E. Kellogg, and J. Thorp. In this system soil series were again at the second lowest level with soil types at the lowest level. The soil type concept was dropped and replaced by the soil phase in the 1950s in a modification of the 1938 Baldwin et al. classification (Simonson, 1997). When Soil Taxonomy was released in 1975, soil series became the most detailed (lowest) level of the classification system, and the only term maintained throughout all U.S. classifications to date. While the number of recognized soil series have increased steadily throughout the history of U.S. soil survey, there was a rapid increase in the recognition of new soil series following the introduction of Soil Taxonomy (Brevik and Hartemink, 2013). References Brevik, E.C., and A.E. Hartemink. 2013. Soil maps of the United States of America. Soil Science Society of America Journal 77:1117-1132. doi:10.2136/sssaj2012.0390. Simonson, R.W. 1997. Evolution of soil series and type concepts in the United States. Advances in Geoecology 29:79-108.

Soil Microbial Biomass, Basal Respiration and Enzyme Activity of Main Forest Types in the Qinling Mountains

PubMed Central

Cheng, Fei; Peng, Xiaobang; Zhao, Peng; Yuan, Jie; Zhong, Chonggao; Cheng, Yalong; Cui, Cui; Zhang, Shuoxin

2013-01-01

Different forest types exert essential impacts on soil physical-chemical characteristics by dominant tree species producing diverse litters and root exudates, thereby further regulating size and activity of soil microbial communities. However, the study accuracy is usually restricted by differences in climate, soil type and forest age. Our objective is to precisely quantify soil microbial biomass, basal respiration and enzyme activity of five natural secondary forest (NSF) types with the same stand age and soil type in a small climate region and to evaluate relationship between soil microbial and physical-chemical characters. We determined soil physical-chemical indices and used the chloroform fumigation-extraction method, alkali absorption method and titration or colorimetry to obtain the microbial data. Our results showed that soil physical-chemical characters remarkably differed among the NSFs. Microbial biomass carbon (Cmic) was the highest in wilson spruce soils, while microbial biomass nitrogen (Nmic) was the highest in sharptooth oak soils. Moreover, the highest basal respiration was found in the spruce soils, but mixed, Chinese pine and spruce stands exhibited a higher soil qCO2. The spruce soils had the highest Cmic/Nmic ratio, the greatest Nmic/TN and Cmic/Corg ratios were found in the oak soils. Additionally, the spruce soils had the maximum invertase activity and the minimum urease and catalase activities, but the maximum urease and catalase activities were found in the mixed stand. The Pearson correlation and principle component analyses revealed that the soils of spruce and oak stands obviously discriminated from other NSFs, whereas the others were similar. This suggested that the forest types affected soil microbial properties significantly due to differences in soil physical-chemical features. PMID:23840671

[Humus composition of black soil and its organo-mineral complexes under different fertility level].

PubMed

Zhao, Lanpo; Wang, Jie; Liu, Jingshuan; Liu, Shuxia; Wang, Yanling; Wang, Hongbin; Zhang, Zhidan

2005-01-01

Determinations by Kumada method showed that with the improvement of black soil fertility, the free and combined humus contents in soil and its different size organo-mineral complexes increased, but the humification degree of free humus decreased, which was more obvious in silt and fine sand size complexes. The organic carbon content in complexes, humus extraction rate, free humus content, and humification degree of free humic acid decreased with the increasing particle size of complexes. All free humic acids in fertile soil were Rp type, while in unfertile soil, they were Rp and B type. With the increasing particle size of complexes, the type of free humic acids changed in the sequence A type (clay)-->B type (silt)-->Rp type (fine sand). Combined form humic acid mainly belonged to A type, no matter what particle size the complex was. The improvement of soil fertility could make the humification degree of free humus in soil and its complexes decrease, and furthermore, result in type change. In black soil, the type change of free humic acid mainly occurred in silt size complex, and that of combined form humic acid mainly occurred in fine sand size complex.

Specific features of the development of soils of hydromorphic ecosystems in the northern taiga of Western Siberia under conditions of cryogenesis

NASA Astrophysics Data System (ADS)

Matyshak, G. V.; Bogatyrev, L. G.; Goncharova, O. Yu.; Bobrik, A. A.

2017-10-01

Differently directed and heterochronous cryogenic processes have contributed to the contrasting soil cover patterns and spatial heterogeneity of the properties of soils in hydromorphic ecosystems of the discontinuous permafrost zone of the northern taiga in Western Siberia. Frost heave and permafrost thawing within ecosystems of highmoor bogs have led to the development of specific cryogenic landforms, such as flat-topped and large peat mounds. A set of cryogenic soils is developed in these ecosystems; it includes different variants of cryozems, gleyzems (Cryosols), and peat soils (Histosols). The distribution of these soil types is controlled by the local topography and thawing depth, other factors being insignificant. Alternation of peat horizons of different types and ages, whirl-like patterns of horizon boundaries, considerable variations in the thickness of soil horizons, and inversions of soil horizons under the impact of frost cracking, frost heave, and cryoturbation are typical of the considered soils. Thawing depth is the most significant factor affecting the thickness of organic horizons, the soil pH, and the degree of decomposition of peat. As a result of the upward movement of bog ecosystems under the impact of frost heave, peat soils are subjected to considerable transformation: peat horizons undergo mineralization, and the thickness of organic horizons decreases; in some cases, eluvial-illuvial differentiation of the mineral horizons takes place, and peat podzols are developed. However, the opposite process of the return of the soils to the bog stage of pedogenesis with peat accumulation may take place in any time in the case of activation of thermokarst processes.

Leaching and sorption of neonicotinoid insecticides and fungicides from seed coatings

USGS Publications Warehouse

Smalling, Kelly; Hladik, Michelle; Sanders, Corey; Kuivila, Kathryn

2018-01-01

Seed coatings are a treatment used on a variety of crops to improve production and offer protection against pests and fungal outbreaks. The leaching of the active ingredients associated with the seed coatings and the sorption to soil was evaluated under laboratory conditions using commercially available corn and soybean seeds to study the fate and transport of these pesticides under controlled conditions. The active ingredients (AI) included one neonicotinoid insecticide (thiamethoxam) and five fungicides (azoxystrobin, fludioxonil, metalaxyl, sedaxane thiabendazole). An aqueous leaching experiment was conducted with treated corn and soybean seeds. Leaching potential was a function of solubility and seed type. The leaching of fludioxonil, was dependent on seed type with a shorter time to equilibrium on the corn compared to the soybean seeds. Sorption experiments with the treated seeds and a solution of the AIs were conducted using three different soil types. Sorption behavior was a function of soil organic matter as well as seed type. For most AIs, a negative relationship was observed between the aqueous concentration and the log Koc. Sorption to all soils tested was limited for the hydrophilic pesticides thiamethoxam and metalaxyl. However, partitioning for the more hydrophobic fungicides was dependent on both seed type and soil properties. The mobility of fludioxonil in the sorption experiment varied by seed type indicating that the adjuvants associated with the seed coating could potentially play a role in the environmental fate of fludioxonil. This is the first study to assess, under laboratory conditions, the fate of pesticides associated with seed coatings using commercially available treated seeds. This information can be used to understand how alterations in agricultural practices (e.g., increasing use of seed treatments) can impact the exposure (concentration and duration) and potential effects of these chemicals to aquatic and terrestrial organisms.

Comparing soil functions for a wide range of agriculture soils focusing on production for bioenergy using a combined isotope-based observation and modelling approach

NASA Astrophysics Data System (ADS)

Leistert, Hannes; Herbstritt, Barbara; Weiler, Markus

2017-04-01

Increase crop production for bioenergy will result in changes in land use and the resulting soil functions and may generate new chances and risks. However, detailed data and information are still missing how soil function may be altered under changing crop productions for bioenergy, in particular for a wide range of agricultural soils since most data are currently derived from individual experimental sites studying different bioenergy crops at one location. We developed a new, rapid measurement approach to investigate the influence of bioenergy plants on the water cycle and different soil functions (filter and buffer of water and N-cycling). For this approach, we drilled 89 soil cores (1-3 m deep) in spring and fall at 11 sites with different soil properties and climatic conditions comparing different crops (grass, corn, willow, poplar, and other less common bioenergy crops) and analyzing 1150 soil samples for water content, nitrate concentration and stable water isotopes. We benchmarked a soil hydrological model (1-D numerical Richards equation, ADE, water isotope fractionation including liquid and vapor composition of isotopes) using longer-term climate variables and water isotopes in precipitation to derive crop specific parameterization and to specifically validate the differences in water transport and water partitioning into evaporation, transpiration and groundwater recharge among the sites and crops using the water isotopes in particular. The model simulation were in good agreement with the observed isotope profiles and allowed us to differentiate among the different crops. We defined different indicators for the soil functions considered in this study. These indicators included the proportion of groundwater recharge, transit time of water (different percentiles) though the upper 2m and nutrient leaching potential (e.g. nitrate) during the dormant season from the rooting zone. The parameterized model was first used to calculate the indicators for the sampled locations and to derive the changes in soil functions by altering the land cover among the different bioenergy crops in comparison to the grassland as a reference. We could show that percolation is strongly influenced by the crops and climate, the transit time is influenced by a combination of soil type, climate and land use, but the effect of soil type is very strong and the nitrate leaching is strongly influenced by soil type. The high variability of transit times and nitrate leaching are due to high variability of the temporal distribution of precipitation. Finally, the model was used to regionalized the indicators to a wide range of soils in the state of Baden-Württemberg and to assess if there are locations where bioenergy crops may improve the considered soil function. Our idea behind this was to propose location where specific bioenergy crops may be highly suitable to improve the current soil function to increase for example the protection of groundwater for drinking water, reduce erosion risk or increase water availability. The proposed method allows to assess the influence of different bioenergy crops on soil functions without costly multi-year measurement systems for assessing the soil functions using soil water content measurements or/and soil water suction devices.

Forms of organic phosphorus in wetland soils

NASA Astrophysics Data System (ADS)

Cheesman, A. W.; Turner, B. L.; Reddy, K. R.

2014-12-01

Phosphorus (P) cycling in freshwater wetlands is dominated by biological mechanisms, yet there has been no comprehensive examination of the forms of biogenic P (i.e., forms derived from biological activity) in wetland soils. We used solution 31P NMR spectroscopy to identify and quantify P forms in surface soils of 28 palustrine wetlands spanning a range of climatic, hydrogeomorphic, and vegetation types. Total P concentrations ranged between 51 and 3516 μg P g-1, of which an average of 58% was extracted in a single-step NaOH-EDTA procedure. The extracts contained a broad range of P forms, including phosphomonoesters (averaging 24% of the total soil P), phosphodiesters (averaging 10% of total P), phosphonates (up to 4% of total P), and both pyrophosphate and long-chain polyphosphates (together averaging 6% of total P). Soil P composition was found to be dependant upon two key biogeochemical properties: organic matter content and pH. For example, stereoisomers of inositol hexakisphosphate were detected exclusively in acidic soils with high mineral content, while phosphonates were detected in soils from a broad range of vegetation and hydrogeomorphic types but only under acidic conditions. Conversely inorganic polyphosphates occurred in a broad range of wetland soils, and their abundance appears to reflect more broadly that of a "substantial" and presumably active microbial community with a significant relationship between total inorganic polyphosphates and microbial biomass P. We conclude that soil P composition varies markedly among freshwater wetlands but can be predicted by fundamental soil properties.

Forms of organic phosphorus in wetland soils

NASA Astrophysics Data System (ADS)

Cheesman, A. W.; Turner, B. L.; Reddy, K. R.

2014-06-01

Phosphorus (P) cycling in freshwater wetlands is dominated by biological mechanisms, yet there has been no comprehensive examination of the forms of biogenic P (i.e. forms derived from biological activity) in wetland soils. We used solution 31P NMR spectroscopy to identify and quantify P forms in surface soils of 28 palustrine wetlands spanning a range of climatic, hydro-geomorphic and vegetation types. Total P concentrations ranged between 51 and 3516 μg P g

Independent data validation of an in vitro method for ...

EPA Pesticide Factsheets

In vitro bioaccessibility assays (IVBA) estimate arsenic (As) relative bioavailability (RBA) in contaminated soils to improve the accuracy of site-specific human exposure assessments and risk calculations. For an IVBA assay to gain acceptance for use in risk assessment, it must be shown to reliably predict in vivo RBA that is determined in an established animal model. Previous studies correlating soil As IVBA with RBA have been limited by the use of few soil types as the source of As. Furthermore, the predictive value of As IVBA assays has not been validated using an independent set of As-contaminated soils. Therefore, the current study was undertaken to develop a robust linear model to predict As RBA in mice using an IVBA assay and to independently validate the predictive capability of this assay using a unique set of As-contaminated soils. Thirty-six As-contaminated soils varying in soil type, As contaminant source, and As concentration were included in this study, with 27 soils used for initial model development and nine soils used for independent model validation. The initial model reliably predicted As RBA values in the independent data set, with a mean As RBA prediction error of 5.3% (range 2.4 to 8.4%). Following validation, all 36 soils were used for final model development, resulting in a linear model with the equation: RBA = 0.59 * IVBA + 9.8 and R2 of 0.78. The in vivo-in vitro correlation and independent data validation presented here provide

Shifts in indigenous microbial communities during the anaerobic degradation of pentachlorophenol in upland and paddy soils from southern China.

PubMed

Chen, Yating; Tao, Liang; Wu, Ke; Wang, Yongkui

2016-11-01

Pentachlorophenol (PCP) is a common persistent pesticide in soil that has generated a significant environmental problem worldwide. Therefore, anaerobic degradation of PCP by the soil indigenous microbial community has gained increasing attention. However, little information is available concerning the functional microorganisms and the potential shifts in the microbial community associated with PCP degradation. In this study, we conducted a set of experiments to determine which components of the indigenous microbial community were capable of degrading PCP in soils of two land use types (upland and paddy soils) in southern China. Our results showed that the PCP degradation rate was significantly higher in paddy soils than that in upland soils. 16S ribosomal RNA (rRNA) high-throughput sequencing revealed significant differences in microbial taxonomic composition between the soil with PCP and blank (soil without PCP) with Acinetobacter, Clostridium, Coprococcus, Oxobacter, and Sedimentibacter dominating the PCP-affected communities. Acinetobacter was also apparently enriched in the paddy soils with PCP (up to 52.2 %) indicated this genus is likely to play an important role in PCP degradation. Additionally, the Fe(III)-reducing bacteria Clostridium may also be involved in PCP degradation. Our data further revealed hitherto unknown metabolisms of potential PCP degradation by microorganisms including Coprococcus, Oxobacter, and Ruminiclostridium. Overall, these findings indicated that land use types may affect the PCP anaerobic degradation rate via the activities of indigenous bacterial populations and extend our knowledge of the bacterial populations responsible for PCP degradation.

Leaching characteristics of toxic constituents from coal fly ash mixed soils under the influence of pH

DOE Office of Scientific and Technical Information (OSTI.GOV)

Komonweeraket, Kanokwan; Cetin, Bora, E-mail: bora.cetin@sdsmt.edu; Benson, Craig H., E-mail: chbenson@wisc.edu

Highlights: • The impact of pH on the leaching of elements and metals from fly ash mixed soils. • Generally Ca, Cd, Mg, and Sr follows a cationic leaching pattern. • The leaching of As and Se shows an oxyanionic leaching pattern. • The leaching behavior of elements does not change based on material type. • Different fly ash types show different abilities in immobilizing trace elements. - Abstract: Leaching behaviors of Arsenic (As), Barium (Ba), Calcium (Ca), Cadmium (Cd), Magnesium (Mg), Selenium (Se), and Strontium (Sr) from soil alone, coal fly ash alone, and soil-coal fly ash mixtures, weremore » studied at a pH range of 2–14 via pH-dependent leaching tests. Seven different types of soils and coal fly ashes were tested. Results of this study indicated that Ca, Cd, Mg, and Sr showed cationic leaching pattern while As and Se generally follows an oxyanionic leaching pattern. On the other hand, leaching of Ba presented amphoteric-like leaching pattern but less pH-dependent. In spite of different types and composition of soil and coal fly ash investigated, the study reveals the similarity in leaching behavior as a function of pH for a given element from soil, coal fly ash, and soil-coal fly ash mixtures. The similarity is most likely due to similar controlling mechanisms (e.g., solubility, sorption, and solid-solution formation) and similar controlling factors (e.g., leachate pH and redox conditions). This offers the opportunity to transfer knowledge of coal fly ash that has been extensively characterized and studied to soil stabilized with coal fly ash. It is speculated that unburned carbon in off-specification coal fly ashes may provide sorption sites for Cd resulting in a reduction in concentration of these elements in leachate from soil-coal fly ash mixture. Class C fly ash provides sufficient CaO to initiate the pozzolanic reaction yielding hydrated cement products that oxyanions, including As and Se, can be incorporated into.« less

How do peat type, sand addition and soil moisture influence the soil organic matter mineralization in anthropogenically disturbed organic soils?

NASA Astrophysics Data System (ADS)

Säurich, Annelie; Tiemeyer, Bärbel; Don, Axel; Burkart, Stefan

2017-04-01

Drained peatlands are hotspots of carbon dioxide (CO2) emissions from agriculture. As a consequence of both drainage induced mineralization and anthropogenic sand mixing, large areas of former peatlands under agricultural use contain soil organic carbon (SOC) at the boundary between mineral and organic soils. Studies on SOC dynamics of such "low carbon organic soils" are rare as the focus of previous studies was mainly either on mineral soils or "true" peat soil. However, the variability of CO2 emissions increases with disturbance and therefore, we have yet to understand the reasons behind the relatively high CO2 emissions of these soils. Peat properties, soil organic matter (SOM) quality and water content are obviously influencing the rate of CO2 emissions, but a systematic evaluation of the hydrological and biogeochemical drivers for mineralization of disturbed peatlands is missing. With this incubation experiment, we aim at assessing the drivers of the high variability of CO2 emissions from strongly anthropogenically disturbed organic soil by systematically comparing strongly degraded peat with and without addition of sand under different moisture conditions and for different peat types. The selection of samples was based on results of a previous incubation study, using disturbed samples from the German Agricultural Soil Inventory. We sampled undisturbed soil columns from topsoil and subsoil (three replicates of each) of ten peatland sites all used as grassland. Peat types comprise six fens (sedge, Phragmites and wood peat) and four bogs (Sphagnum peat). All sites have an intact peat horizon that is permanently below groundwater level and a strongly disturbed topsoil horizon. Three of the fen and two of the bog sites have a topsoil horizon altered by sand-mixing. In addition the soil profile was mapped and samples for the determination of soil hydraulic properties were collected. All 64 soil columns (including four additional reference samples) will be installed in a microcosm system under a constant temperature of 10°C. The water-saturated soil columns will be drained via suction plates at the bottom of the columns by stepwise increase of the suction. The head space of the soil columns will be permanently flushed with moistened synthetic air and CO2 concentrations will be measured via online gas chromatography. First results will be presented.

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 7 Agriculture 5 2010-01-01 2010-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 7 Agriculture 5 2011-01-01 2011-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2014 CFR

2014-01-01

... 7 Agriculture 5 2014-01-01 2014-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2013 CFR

2013-01-01

... 7 Agriculture 5 2013-01-01 2013-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

7 CFR 319.69-5 - Types of soil authorized for packing.

Code of Federal Regulations, 2012 CFR

2012-01-01

... 7 Agriculture 5 2012-01-01 2012-01-01 false Types of soil authorized for packing. 319.69-5 Section 319.69-5 Agriculture Regulations of the Department of Agriculture (Continued) ANIMAL AND PLANT HEALTH... Regulations § 319.69-5 Types of soil authorized for packing. The following types of soil or earth are...

Geochemical cartography as a tool for assessing the degree of soil contamination with heavy metals in Poland

NASA Astrophysics Data System (ADS)

Szymon Borkowski, Andrzej; Kwiatkowska-Malina, Jolanta

2016-04-01

Spatial disposition of chemical elements including heavy metals in the soil environment is a very important information during preparation of the thematic maps for the environmental protection and/or spatial planning. This knowledge is also essential for the earth's surface and soil's monitoring, designation of areas requiring improvement including remediation. The main source of anthropogenic pollution of soil with heavy metals are industry related to the mining coal and liquid fuels, mining and metallurgy, chemical industry, energy production, waste management, agriculture and transport. The geochemical maps as a kind of specific thematic maps made on the basis of datasets obtained from the Polish Geological Institute's resources allow to get to know the spatial distribution of different chemical elements including heavy metals in soil. The results of the research carried out by the Polish Geological Institute showed strong contamination in some regions in Poland mainly with arsenic, cadmium, lead and nickel. For this reason it was the point to prepare geochemical maps showing contamination of soil with heavy metals, and determine main sources of contamination and zones where heavy metals concentration was higher than acceptable contents. It was also presented a summary map of soil contamination with heavy metals. Additionally, location of highly contaminated zones was compiled with predominant in those areas types of arable soils and then results were thoroughly analyzed. This information can provide a base for further detailed studies on the soil contamination with heavy metals.

Case study of a full-scale evapotranspiration cover

USGS Publications Warehouse

McGuire, Patrick E.; Andraski, Brian J.; Archibald, Ryan E.

2009-01-01

The design, construction, and performance analyses of a 6.1ha evapotranspiration (ET) landfill cover at the semiarid U.S. Army Fort Carson site, near Colorado Springs, Colo. are presented. Initial water-balance model simulations, using literature reported soil hydraulic data, aided selection of borrow-source soil type(s) that resulted in predictions of negligible annual drainage (⩽1mm∕year). Final construction design was based on refined water-balance simulations using laboratory determined soil hydraulic values from borrow area natural soil horizons that were described with USDA soil classification methods. Cover design components included a 122cmthick clay loam (USDA), compaction ⩽80% of the standard Proctor maximum dry density (dry bulk density ∼1.3Mg∕m3), erosion control measures, top soil amended with biosolids, and seeding with native grasses. Favorable hydrologic performance for a 5year period was documented by lysimeter-measured and Richards’-based calculations of annual drainage that were all <0.4mm∕year. Water potential data suggest that ET removed water that infiltrated the cover and contributed to a persistent driving force for upward flow and removal of water from below the base of the cover.

Plant selection and soil legacy enhance long-term biodiversity effects.

PubMed

Zuppinger-Dingley, Debra; Flynn, Dan F B; De Deyn, Gerlinde B; Petermann, Jana S; Schmid, Bernhard

2016-04-01

Plant-plant and plant-soil interactions can help maintain plant diversity and ecosystem functions. Changes in these interactions may underlie experimentally observed increases in biodiversity effects over time via the selection of genotypes adapted to low or high plant diversity. Little is known, however, about such community-history effects and particularly the role of plant-soil interactions in this process. Soil-legacy effects may occur if co-evolved interactions with soil communities either positively or negatively modify plant biodiversity effects. We tested how plant selection and soil legacy influence biodiversity effects on productivity, and whether such effects increase the resistance of the communities to invasion by weeds. We used two plant selection treatments: parental plants growing in monoculture or in mixture over 8 yr in a grassland biodiversity experiment in the field, which we term monoculture types and mixture types. The two soil-legacy treatments used in this study were neutral soil inoculated with live or sterilized soil inocula collected from the same plots in the biodiversity experiment. For each of the four factorial combinations, seedlings of eight species were grown in monocultures or four-species mixtures in pots in an experimental garden over 15 weeks. Soil legacy (live inoculum) strongly increased biodiversity complementarity effects for communities of mixture types, and to a significantly weaker extent for communities of monoculture types. This may be attributed to negative plant-soil feedbacks suffered by mixture types in monocultures, whereas monoculture types had positive plant-soil feedbacks, in both monocultures and mixtures. Monocultures of mixture types were most strongly invaded by weeds, presumably due to increased pathogen susceptibility, reduced biomass, and altered plant-soil interactions of mixture types. These results show that biodiversity effects in experimental grassland communities can be modified by the evolution of positive vs. negative plant-soil feedbacks of plant monoculture vs. mixture types.

Effect of soil in nutrient cycle assessment at dairy farms

NASA Astrophysics Data System (ADS)

van Leeuwen, Maricke; de Boer, Imke; van Dam, Jos; van Middelaar, Corina; Stoof, Cathelijne

2016-04-01

Annual farm nutrient cycle assessments give valuable insight in the nutrient cycles and nutrient losses at dairy farms. It describes nutrient use efficiencies for the entire farm and for the underlying components cattle, manure, crops and soil. In many modelling studies, soil is kept as a constant factor, while soil quality is vital for soil functioning of the ecosystem. Improving soil quality will improve the nutrient cycle, and will also have positive effect on the soil functions crop production, water cycling and greenhouse gas mitigation. Spatial variation of soil properties within a farm, however, are not included in annual nutrient cycle assessments. Therefore it is impossible to identify fields where most profit can be gained by improving farm management at field level, and it is not possible to identify and to quantify nutrient flow path ways. The aim of this study is to develop a framework to improve the annual nutrient cycle assessment at Dutch dairy farms, by including soil properties and their spatial variation within farms. Soil type and soil quality will be described by visual soil assessment of soil quality characteristics. The visual observations will be linked to the nutrient cycle assessment, using soil-hydrological model SWAP. We will demonstrate how soil quality at field level can impact on crop production, eutrophication potential and greenhouse gas potential at farm level. Also, we will show how this framework can be used by farmers to improve their farm management. This new approach is focusing on annual nutrient cycle assessment, but could also be used in life cycle assessment. It will improve understanding of soil functioning and dairy farm management.

Prediction of terrestrial gamma dose rate based on geological formations and soil types in the Johor State, Malaysia.

PubMed

Saleh, Muneer Aziz; Ramli, Ahmad Termizi; bin Hamzah, Khaidzir; Alajerami, Yasser; Moharib, Mohammed; Saeed, Ismael

2015-10-01

This study aims to predict and estimate unmeasured terrestrial gamma dose rate (TGDR) using statistical analysis methods to derive a model from the actual measurement based on geological formation and soil type. The measurements of TGDR were conducted in the state of Johor with a total of 3873 measured points which covered all geological formations, soil types and districts. The measurements were taken 1 m above the soil surface using NaI [Ti] detector. The measured gamma dose rates ranged from 9 nGy h(-1) to 1237 nGy h(-1) with a mean value of 151 nGy h(-1). The data have been normalized to fit a normal distribution. Tests of significance were conducted among all geological formations and soil types, using the unbalanced one way ANOVA. The results indicated strong significant differences due to the different geological formations and soil types present in Johor State. Pearson Correlation was used to measure the relations between gamma dose rate based on geological formation and soil type (D(G,S)) with the gamma dose rate based on geological formation (D(G)) or soil type (D(s)). A very good correlation was found between D(G,S) and D(G) or D(G,S) and D(s). A total of 118 pairs of geological formations and soil types were used to derive the statistical contribution of geological formations and soil types to gamma dose rates. The contribution of the gamma dose rate from geological formation and soil type were found to be 0.594 and 0.399, respectively. The null hypotheses were accepted for 83% of examined data, therefore, the model could be used to predict gamma dose rates based on geological formation and soil type information. Copyright © 2015 Elsevier Ltd. All rights reserved.

Forest composition modifies litter dynamics and decomposition in regenerating tropical dry forest.

PubMed

Schilling, Erik M; Waring, Bonnie G; Schilling, Jonathan S; Powers, Jennifer S

2016-09-01

We investigated how forest composition, litter quality, and rainfall interact to affect leaf litter decomposition across three successional tropical dry forests in Costa Rica. We monitored litter stocks and bulk litter turnover in 18 plots that exhibit substantial variation in soil characteristics, tree community structure, fungal communities (including forests dominated by ecto- or arbuscular mycorrhizal host trees), and forest age. Simultaneously, we decomposed three standard litter substrates over a 6-month period spanning an unusually intense drought. Decay rates of standard substrates depended on the interaction between litter identity and forest type. Decomposition rates were correlated with tree and soil fungal community composition as well as soil fertility, but these relationships differed among litter types. In low fertility soils dominated by ectomycorrhizal oak trees, bulk litter turnover rates were low, regardless of soil moisture. By contrast, in higher fertility soils that supported mostly arbuscular mycorrhizal trees, bulk litter decay rates were strongly dependent on seasonal water availability. Both measures of decomposition increased with forest age, as did the frequency of termite-mediated wood decay. Taken together, our results demonstrate that soils and forest age exert strong control over decomposition dynamics in these tropical dry forests, either directly through effects on microclimate and nutrients, or indirectly by affecting tree and microbial community composition and traits, such as litter quality.

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce.

PubMed

Schreiter, Susanne; Ding, Guo-Chun; Heuer, Holger; Neumann, Günter; Sandmann, Martin; Grosch, Rita; Kropf, Siegfried; Smalla, Kornelia

2014-01-01

The complex and enormous diversity of microorganisms associated with plant roots is important for plant health and growth and is shaped by numerous factors. This study aimed to unravel the effects of the soil type on bacterial communities in the rhizosphere of field-grown lettuce. We used an experimental plot system with three different soil types that were stored at the same site for 10 years under the same agricultural management to reveal differences directly linked to the soil type and not influenced by other factors such as climate or cropping history. Bulk soil and rhizosphere samples were collected 3 and 7 weeks after planting. The analysis of 16S rRNA gene fragments amplified from total community DNA by denaturing gradient gel electrophoresis and pyrosequencing revealed soil type dependent differences in the bacterial community structure of the bulk soils and the corresponding rhizospheres. The rhizosphere effect differed depending on the soil type and the plant growth developmental stage. Despite the soil type dependent differences in the bacterial community composition several genera such as Sphingomonas, Rhizobium, Pseudomonas, and Variovorax were significantly increased in the rhizosphere of lettuce grown in all three soils. The number of rhizosphere responders was highest 3 weeks after planting. Interestingly, in the soil with the highest numbers of responders the highest shoot dry weights were observed. Heatmap analysis revealed that many dominant operational taxonomic units were shared among rhizosphere samples of lettuce grown in diluvial sand, alluvial loam, and loess loam and that only a subset was increased in relative abundance in the rhizosphere compared to the corresponding bulk soil. The findings of the study provide insights into the effect of soil types on the rhizosphere microbiome of lettuce.

Effect of the soil type on the microbiome in the rhizosphere of field-grown lettuce

PubMed Central

Schreiter, Susanne; Ding, Guo-Chun; Heuer, Holger; Neumann, Günter; Sandmann, Martin; Grosch, Rita; Kropf, Siegfried; Smalla, Kornelia

2014-01-01

The complex and enormous diversity of microorganisms associated with plant roots is important for plant health and growth and is shaped by numerous factors. This study aimed to unravel the effects of the soil type on bacterial communities in the rhizosphere of field-grown lettuce. We used an experimental plot system with three different soil types that were stored at the same site for 10 years under the same agricultural management to reveal differences directly linked to the soil type and not influenced by other factors such as climate or cropping history. Bulk soil and rhizosphere samples were collected 3 and 7 weeks after planting. The analysis of 16S rRNA gene fragments amplified from total community DNA by denaturing gradient gel electrophoresis and pyrosequencing revealed soil type dependent differences in the bacterial community structure of the bulk soils and the corresponding rhizospheres. The rhizosphere effect differed depending on the soil type and the plant growth developmental stage. Despite the soil type dependent differences in the bacterial community composition several genera such as Sphingomonas, Rhizobium, Pseudomonas, and Variovorax were significantly increased in the rhizosphere of lettuce grown in all three soils. The number of rhizosphere responders was highest 3 weeks after planting. Interestingly, in the soil with the highest numbers of responders the highest shoot dry weights were observed. Heatmap analysis revealed that many dominant operational taxonomic units were shared among rhizosphere samples of lettuce grown in diluvial sand, alluvial loam, and loess loam and that only a subset was increased in relative abundance in the rhizosphere compared to the corresponding bulk soil. The findings of the study provide insights into the effect of soil types on the rhizosphere microbiome of lettuce. PMID:24782839

CO2 CH4 flux Air temperature Soil temperature and Soil moisture, Barrow, Alaska 2013 ver. 1

DOE Data Explorer

Margaret Torn

2015-01-14

This dataset consists of field measurements of CO2 and CH4 flux, as well as soil properties made during 2013 in Areas A-D of Intensive Site 1 at the Next-Generation Ecosystem Experiments (NGEE) Arctic site near Barrow, Alaska. Included are i) measurements of CO2 and CH4 flux made from June to September (ii) Calculation of corresponding Gross Primary Productivity (GPP) and CH4 exchange (transparent minus opaque) between atmosphere and the ecosystem (ii) Measurements of Los Gatos Research (LGR) chamber air temperature made from June to September (ii) measurements of surface layer depth, type of surface layer, soil temperature and soil moisture from June to September.

Sharpley’s Bottom Historic Sites Interdisciplinary Investigations, Tombigbee River Multi-Resource District, Alabama and Mississippi. Phase II. Archeological Investigations.

DTIC Science & Technology

1983-10-01

1941; Young ’.4 1961:41-46). The treaty launched a tidal wave of new settlement. Planters from the older seaboard South coveted the rich soils of the...majority of Sharpley’s tenants remained renters with little or no property, victims of chronic debt, overworked soil , and periodic flooding of...Sections 7, 8 and 18 of R. 8E, T. 15S. Major soil types include alluvial land along the riverbanks and in swamps, Eustis loamy sand, and Bibb, Myatt

A strategy for the survey of urban garden soils

NASA Astrophysics Data System (ADS)

Schwartz, C.; Chenot, E. D.; Cortet, J.; Douay, F.; Dumat, C.; Pernin, C.; Pourrut, B.

2012-04-01

In France and all over the world, there is no systematic data available on the quality (fertility and contamination) of garden soils. Nevertheless, there is a growing need for a typology and for a method dedicated to national and international garden soil survey. This inventory is much needed in the context of environmental risk assessment, to predict the potential impact on human health of the direct contact with garden soils and of the consumption of vegetables from gardens. The state of the art on the international knowledge on garden soils, gardening practices and food production, shows that gardens remain poorly known and very complex ecological, economical and social systems. Their global quality is the result of a wide number of factors including environment, history, specific characteristics of the gardens, gardeners and their practices, plant and/or animal productions and socio-economic context. The aim is then to better know the determinism of the agronomic, environmental and sanitary properties of gardens as a function of gardening practices and their impact on the quality of soils and plants. We propose a definition of "garden" and more generally of all the field "garden". The system "garden" is represented by attributes (soil and plant characteristics) and factors with various impacts (e.g. environment > soil parent material > former land uses > age and sex of gardener > gardening practices > socio-professional group > type and proportion of productions > climate > age of the garden > size of the garden > education, information > cultural origin > functions of the garden > regulations). A typology of gardens including 7 selected factors and associated categories and a method for describing, sampling and characterizing a population of gardens representative (for a country) are proposed. Based on the statistical analysis on regional databases, we have determined and proposed an optimum size for the collected population of garden soils. The discussion of the results highlights the main indicators of soil quality and the method for a survey of garden soils is proposed. These results and the resulting approach might be validated and used on a worldwide scale to collect garden soil samples with the objective of agronomic, environmental and sanitary studies adapted to this type of urban agriculture.

[Interrelationships between soil fauna and soil environmental factors in China: research advance].

PubMed

Wang, Yi; Wei, Wei; Yang, Xing-zhong; Chen, Li-ding; Yang, Lei

2010-09-01

Soil fauna has close relations with various environmental factors in soil ecosystem. To explore the interrelationships between soil fauna and soil environmental factors is of vital importance to deep understand the dynamics of soil ecosystem and to assess the functioning of the ecosystem. The environmental factors affecting soil fauna can be classified as soil properties and soil external environment. The former contains soil basic physical and chemical properties, soil moisture, and soil pollution. The latter includes vegetation, land use type, landform, and climate, etc. From these aspects, this paper summarized the published literatures in China on the interrelationships between soil fauna and soil environmental factors. It was considered that several problems were existed in related studies, e.g., fewer researches were made in integrating soil fauna's bio-indicator function, research methods were needed to be improved, and the studies on the multi-environmental factors and their large scale spatial-temporal variability were in deficiency. Corresponding suggestions were proposed, i.e., more work should be done according to the practical needs, advanced experiences from abroad should be referenced, and comprehensive studies on multi-environmental factors and long-term monitoring should be conducted on large scale areas.

White grubs

Treesearch

Albert E. Mayfield

2012-01-01

White grubs are soil-dwelling larvae of insects commonly known as “May beetles” or “June beetles” in the family Scarabaeidae. These grubs feed on herbaceous plant roots and other soil organic matter, but will also feed on the roots of woody plants, including all types of coniferous and hardwood seedlings in nursery settings. Numerous genera known to cause damage in...

Comparative fate of an organochlorine, chlordecone, and a related compound, chlordecone-5b-hydro, in soils and plants.

PubMed

Clostre, Florence; Cattan, Philippe; Gaude, Jean-Marie; Carles, Céline; Letourmy, Philippe; Lesueur-Jannoyer, Magalie

2015-11-01

We address the problem of the comparative environmental fate of a pesticide, chlordecone (CLD), and a related compound, chlordecone-5b-hydro (CLD-5b-hydro). We used a large database including data from two types of contaminated volcanic soils, andosol and nitisol, and thirteen crops grown in the French West Indies in historically polluted soils. We performed in-depth statistical analysis of the effect of different parameters (soil type, crop, organ, etc.) on the ratio of CLD-5b-hydro to CLD in both soils and plants. The environmental fate of the two compounds differed depending on the type of soil. Proportionally, more CLD-5b-hydro than CLD was measured in nitisols than in andosols. Compared to CLD, we also found a preferential transfer of CLD-5b-hydro from the soil to the plant. Finally, mobilization of the two compounds differed according to the species of crop but also within the plant, with increasing ratios from the roots to the top of the plant. The properties of the compound played a key role in the underlying processes. Because CLD-5b-hydro is more soluble in water and has a lower K(ow) than CLD, CLD-5b-hydro (1) was more easily absorbed from soils by plants, (2) was less adsorbed onto plant tissues and (3) was transported in greater quantities through the transpiration stream. Due to the amounts of CLD-5b-hydro we measured in some plant parts such as cucurbit fruits, an assessment of the toxicity of this CLD monodechlorinated product is recommended. Copyright © 2015 Elsevier B.V. All rights reserved.

Atrazine degradation by fungal co-culture enzyme extracts under different soil conditions.

PubMed

Chan-Cupul, Wilberth; Heredia-Abarca, Gabriela; Rodríguez-Vázquez, Refugio

2016-01-01

This investigation was undertaken to determine the atrazine degradation by fungal enzyme extracts (FEEs) in a clay-loam soil microcosm contaminated at field application rate (5 μg g(-1)) and to study the influence of different soil microcosm conditions, including the effect of soil sterilization, water holding capacity, soil pH and type of FEEs used in atrazine degradation through a 2(4) factorial experimental design. The Trametes maxima-Paecilomyces carneus co-culture extract contained more laccase activity and hydrogen peroxide (H2O2) content (laccase = 18956.0 U mg protein(-1), H2O2 = 6.2 mg L(-1)) than the T. maxima monoculture extract (laccase = 12866.7 U mg protein(-1), H2O2 = 4.0 mg L(-1)). Both extracts were able to degrade atrazine at 100%; however, the T. maxima monoculture extract (0.32 h) achieved a lower half-degradation time than its co-culture with P. carneus (1.2 h). The FEE type (p = 0.03) and soil pH (p = 0.01) significantly affected atrazine degradation. The best degradation rate was achieved by the T. maxima monoculture extract in an acid soil (pH = 4.86). This study demonstrated that both the monoculture extracts of the native strain T. maxima and its co-culture with P. carneus can efficiently and quickly degrade atrazine in clay-loam soils.

Trace element analysis of soil type collected from the Manjung and central Perak

NASA Astrophysics Data System (ADS)

Azman, Muhammad Azfar; Hamzah, Suhaimi; Rahman, Shamsiah Abdul; Elias, Md Suhaimi; Abdullah, Nazaratul Ashifa; Hashim, Azian; Shukor, Shakirah Abd; Kamaruddin, Ahmad Hasnulhadi Che

2015-04-01

Trace elements in soils primarily originated from their parent materials. Parents' material is the underlying geological material that has been undergone different types of chemical weathering and leaching processes. Soil trace elements concentrations may be increases as a result of continuous input from various human activities, including power generation, agriculture, mining and manufacturing. This paper describes the Neutron Activation Analysis (NAA) method used for the determination of trace elements concentrations in part per million (ppm) present in the terrestrial environment soil in Perak. The data may indicate any contamination of trace elements contributed from human activities in the area. The enrichment factors were used to check if there any contamination due to the human activities (power plants, agricultural, mining, etc.) otherwise the values would serve as a baseline data for future study. The samples were collected from 27 locations of different soil series in the area at two different depths: the top soil (0-15cm) and the sub soil (15-30cm). The collected soil samples were air dried at 60°C and passed through 2 µm sieve. Instrumental Neutron Activation Analysis (NAA) has been used for the determination of trace elements. Samples were activated in the Nuclear Malaysia TRIGA Mark II reactor followed by gamma spectrometric analysis. By activating the stable elements in the samples, the elements can be determined from the intensities of gamma energies emitted by the respected radionuclides.

A Quick-Test for Biochar Effects on Seed Germination ...

EPA Pesticide Factsheets

Biochar is being globally evaluated as a soil amendment to improve soil characteristics (e.g. soil water holding, nutrient exchange, microbiology, pesticides and chemical availability) to increase crop yields. Unfortunately, there are no quick tests to determine what biochar types are most effective at improving soil characteristics amenable for higher crop yields. Seed germination is a critical parameter for plant establishment and may be a quick indicator of biochar quality. We adapted Oregon State University Seed Laboratory procedures to develop a “quick-test” for screening the effects of biochar on seed germination. We used 11.0 cm rectangular x 3.5 cm deep containers fitted with blotter paper. The paper was premoistened with reverse-osmosis water, followed by placement of seeds (25 in a uniform 5 x 5 vacuum-assisted pattern, and biochar mixtures). A Norfolk and Coxville soil series from South Carolina were used. A total of 18 biochars were evaluated that were produced from 6 feedstocks (pine chips, poultry litter, swine solids, switchgrass, and two blends of pine chips and poultry litter); with biochar from each feedstock made by pyrolysis at 350, 500 and 700 ̊ C. Crops were cabbage, cucumber, onion, ryegrass and tomato. Preliminary results from the test indicated differences in seed germination due to soil type and possibly soil x biochar feedstock interactions. Other measurements including shoot dry weight per plate and pH of the soil+ biochar mixtur

An investigation into the reactions of biochar in soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Joseph, Stephen; Camps-Arbestain, Marta; Lin, Yun

2010-10-12

Interactions between biochar, soil, microbes and plant roots may occur within a short period of time after application to the soil. The extent, rates and implications of these interactions, however, are far from being understood. This review includes a description of the properties of biochars and suggests possible reactions that may occur after the addition of biochars to soil. These include dissolution-precipitation, adsorption-desorption, acid-base and redox reactions. Special attention is given to reactions occurring within pores, and to interactions with roots, microorganisms and soil fauna. The examination of biochars (from chicken litter, greenwaste and paper mill sludges) weathered for onemore » and two years in an Australian Ferrosol provides evidence for some of the mechanisms described in this review and offers an insight to reactions at a molecular scale. These interactions are biochar- and site-specific. Therefore, suitable experimental trials combining biochar types and different pedoclimatic conditions are needed to determine the extent to which these reactions influence the potential of biochar as a soil amendment and C-sequestration tool.« less

Effects of arsenic and cadmium on bioaccessibility of lead in spiked soils assessed by Unified BARGE Method.

PubMed

Xia, Qing; Peng, Cheng; Lamb, Dane; Kader, Mohammed; Mallavarapu, Megharaj; Naidu, Ravi; Ng, Jack C

2016-07-01

The bioaccessibility of lead (Pb) in contaminated soils has been extensively studied, including the influence of soil properties on Pb bioaccessibility. However, little is known about the effects of other metals/metalloid, such as arsenic (As), cadmium (Cd) on the bioaccessibility of Pb, i.e. whether As or Cd could increase or decrease the solubility of Pb in human gastrointestinal tract when Pb-contaminated soil and As-contaminated (or Cd-contaminated) soil are ingested simultaneously. Furthermore, it is far from clear that if soil property could make a difference to these effects. In this study, seven types of soils were collected in Australia and spiked with As, Cd or Pb. Gastric bioaccessibility of Pb ranged from 44 ± 0.9% to 100 ± 6.7% whilst intestinal bioaccessibility dropped to 1 ± 0.2% to 36 ± 1.7%. Statistical analysis shows total Pb in soil was the most significant controller for bioaccessible Pb. Effects of As and Cd on the bioaccessibility of Pb in simulated human digestive system were studied by mixing As-spiked soil (or Cd-spiked soil) with Pb-spiked soil of the same type during bioaccessibility test. Results reveal that neither As nor Cd had impact on Pb bioaccessibility, which indicates when As, Cd and Pb aged in soils separately, they may behave independently in the bioaccessibility measuring system. This finding can be part of evidence to assume additive effect when it comes to estimate the bioaccessibility of mixtures of independently-aged As and Pb (or Cd and Pb) in soils. Copyright © 2016 Elsevier Ltd. All rights reserved.

Superfund Record of Decision (EPA Region 5): Pristine, Inc. , Reading, OH. (First remedial action), March 1990. (Amendment). Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

The 2-acre Pristine site is in Reading, Hamilton County, Ohio. The site is bordered by industrial and residential areas, including a trailer park three hundred feet northeast of the site. In 1979, State investigations identified as many as 8,000 to 10,000 drums and several thousand gallons of liquid wastes onsite. Types of waste included acids, solvents, pesticides, and PCBs. From 1980 to 1983, EPA and Pristine removed onsite wastes including paint and solvent sludge, solvents, pesticides, organics, PCB-contaminated soil, and incinerator ash. The ROD amends the soil component remedy of the 1987 ROD from in-situ vitrification to incineration and soilmore » vapor extraction. The primary contaminants of concern affecting the soil, sediment, debris, and ground water are VOCs including benzene, PCE, TCE, and xylenes; other organics including dioxin and pesticides such as DDT; metals including lead, chromium, and arsenic; and other inorganics.« less

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally

PubMed Central

Ramirez, Kelly S.; Leff, Jonathan W.; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W.; Kelly, Eugene F.; Oldfield, Emily E.; Shaw, E. Ashley; Steenbock, Christopher; Bradford, Mark A.; Wall, Diana H.; Fierer, Noah

2014-01-01

Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. PMID:25274366

A global data set of soil particle size properties

NASA Technical Reports Server (NTRS)

Webb, Robert S.; Rosenzweig, Cynthia E.; Levine, Elissa R.

1991-01-01

A standardized global data set of soil horizon thicknesses and textures (particle size distributions) was compiled. This data set will be used by the improved ground hydrology parameterization designed for the Goddard Institute for Space Studies General Circulation Model (GISS GCM) Model 3. The data set specifies the top and bottom depths and the percent abundance of sand, silt, and clay of individual soil horizons in each of the 106 soil types cataloged for nine continental divisions. When combined with the World Soil Data File, the result is a global data set of variations in physical properties throughout the soil profile. These properties are important in the determination of water storage in individual soil horizons and exchange of water with the lower atmosphere. The incorporation of this data set into the GISS GCM should improve model performance by including more realistic variability in land-surface properties.

Evaluation of gravimetric ground truth soil moisture data collected for the agricultural soil moisture experiment, 1978 Colby, Kansas, aircraft mission

NASA Technical Reports Server (NTRS)

Arya, L. M.; Phinney, D. E. (Principal Investigator)

1980-01-01

Soil moisture data acquired to support the development of algorithms for estimating surface soil moisture from remotely sensed backscattering of microwaves from ground surfaces are presented. Aspects of field uniformity and variability of gravimetric soil moisture measurements are discussed. Moisture distribution patterns are illustrated by frequency distributions and contour plots. Standard deviations and coefficients of variation relative to degree of wetness and agronomic features of the fields are examined. Influence of sampling depth on observed moisture content an variability are indicated. For the various sets of measurements, soil moisture values that appear as outliers are flagged. The distribution and legal descriptions of the test fields are included along with examinations of soil types, agronomic features, and sampling plan. Bulk density data for experimental fields are appended, should analyses involving volumetric moisture content be of interest to the users of data in this report.

Seasonality of semi-arid and savanna-type ecosystems in an Earth system model

NASA Astrophysics Data System (ADS)

Dahlin, K.; Swenson, S. C.; Lombardozzi, D.; Kamoske, A.

2016-12-01

Recent work has identified semi-arid and savanna-type (SAST) ecosystems as a critical component of interannual variability in the Earth system (Poulter et al. 2014, Ahlström et al. 2015), yet our understanding of the spatial and temporal patterns present in these systems remains limited. There are three major factors that contribute to the complex behavior of SAST ecosystems, globally. First is leaf phenology, the timing of the appearance, presence, and senescence of plant leaves. Plants grow and drop their leaves in response to a variety of cues, including soil moisture, rainfall, day length, and relative humidity, and alternative phenological strategies might often co-exist in the same location. The second major factor in savannas is soil moisture. The complex nature of soil behavior under extremely dry, then extremely wet conditions is critical to our understanding of how savannas function. The third factor is fire. Globally, virtually all savanna-type ecosystems operate with some non-zero fire return interval. Here we compare model output from the Community Land Model (CLM5-BGC) in SAST regions to remotely sensed data on these three variables - phenology (MODIS LAI), soil moisture (SMAP), and fire (GFED4) - assessing both annual spatial patterns and intra-annual variability, which is critical in these highly variable systems. We present new SAST-specific first- and second-order benchmarks, including numbers of annual LAI peaks (often >1 in SAST systems) and correlations between soil moisture, LAI, and fire. Developing a better understanding of how plants respond to seasonal patterns is a critical first step in understanding how SAST ecosystems will respond to and influence climate under future scenarios.

Impervious Surfaces Alter Soil Bacterial Communities in Urban Areas: A Case Study in Beijing, China

PubMed Central

Hu, Yinhong; Dou, Xiaolin; Li, Juanyong; Li, Feng

2018-01-01

The rapid expansion of urbanization has caused land cover change, especially the increasing area of impervious surfaces. Such alterations have significant effects on the soil ecosystem by impeding the exchange of gasses, water, and materials between soil and the atmosphere. It is unclear whether impervious surfaces have any effects on soil bacterial diversity and community composition. In the present study, we conducted an investigation of bacterial communities across five typical land cover types, including impervious surfaces (concrete), permeable pavement (bricks with round holes), shrub coverage (Buxus megistophylla Levl.), lawns (Festuca elata Keng ex E. Alexeev), and roadside trees (Sophora japonica Linn.) in Beijing, to explore the response of bacteria to impervious surfaces. The soil bacterial communities were addressed by high-throughput sequencing of the bacterial 16S rRNA gene. We found that Proteobacteria, Actinobacteria, Acidobacteria, Bacteroidetes, Chloroflexi, and Firmicutes were the predominant phyla in urban soils. Soil from impervious surfaces presented a lower bacterial diversity, and differed greatly from other types of land cover. Soil bacterial diversity was predominantly affected by Zn, dissolved organic carbon (DOC), and soil moisture content (SMC). The composition of the bacterial community was similar under shrub coverage, roadside trees, and lawns, but different from beneath impervious surfaces and permeable pavement. Variance partitioning analysis showed that edaphic properties contributed to 12% of the bacterial community variation, heavy metal pollution explained 3.6% of the variation, and interaction between the two explained 33% of the variance. Together, our data indicate that impervious surfaces induced changes in bacterial community composition and decrease of bacterial diversity. Interactions between edaphic properties and heavy metals were here found to change the composition of the bacterial community and diversity across areas with different types of land cover, and soil properties play a more important role than heavy metals. PMID:29545776

Woodland carbon code: building an evidence base for the "4 per mil" initiative in land converted to forestry.

NASA Astrophysics Data System (ADS)

Hannam, Jacqueline; Vanguelova, Elena; West, Vicky

2017-04-01

The Woodland Carbon Code is a voluntary standard for woodland creation projects in the UK. Carbon sequestration resulting from certified projects will contribute directly to the UK's national targets for reducing emissions of greenhouse gases (GHG). Whilst this is concerned primarily with above ground capture there is little empirical evidence of the longer term carbon sequestration potential of soils under this land use change in the UK. We present preliminary results from a resurvey of 20 sites originally sampled as part of the soil survey of England and Wales. It includes soil carbon stocks assessed within the soil profile (up to 1m depth) where sites have been converted to forestry in the last 40 years. The small number of sites (n=20) and high variability in soil type, forest type and original land use prevented detailed analysis between these different factors, but overall there was an increase in carbon concentration in the whole profile, driven primarily by an increase the surface organic layers. For all sites combined there was no significant difference in the C stocks between the two survey periods. The increase in carbon stock in the surface organic horizons tended to be offset by a decrease in the mineral subsoils (specifically in Brown Earth soils) primarily as a result of bulk density changes. There are presently insufficient measured data from a range of UK climate, land-use and soil type conditions to quantify with confidence soil C changes during afforestation. This is partly because of the difficulties of detecting relatively slow changes in spatially heterogeneous soils and also obtaining good examples of sites that have undergone documented land use change. Reviewing results from all ongoing afforestation projects in the UK will provide better quantification of the C sequestration potential of forest soils to be accounted for in the Woodland Carbon Code's overall GHG mitigation potential.

Superfund Record of Decision (EPA Region 5): Bofors Nobel Site, Muskegon, MI. (First remedial action), (amendment), July 1992. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

The 85-acre Bofors Nobel site contains an active specialty chemical production plant in Egelston Township, Muskegon County, Michigan. Site features include an unused landfill. The ROD amends a 1990 ROD written by the state, which consisted of onsite incineration and onsite landfilling of lagoon area soil, construction of RCRA-type secure landfill cells to hold non-incinerated material and ash from the incinerated sludge. The selected amended remedial action for the site includes excavating and containing approximately 767,000 cubic yards of untreated sludge and soil in onsite RCRA-type secure landfill cells constructed as part of the original remedial action. The ROD Amendmentmore » does not address any issue associated with ground water treatment.« less

Positive responses of belowground C dynamics to nitrogen enrichment in China.

PubMed

Deng, Lei; Peng, Changhui; Zhu, Guangyu; Chen, Lei; Liu, Yulin; Shangguan, Zhouping

2018-03-01

Determining how nitrogen (N) impacts ecosystem carbon (C) cycling is critical to using C sequestration to offset anthropogenic CO 2 emissions. The N deposition rate in China is higher than the global average; however, many results of N enrichment experiments in China have not been included in global syntheses. In this study, we assembled a large dataset that comprised 124 published studies concerning N addition experiments, including 570 observations at 127 sites across China, to quantify the responses of belowground C dynamics to N enrichment in terrestrial ecosystems in China by a meta-analysis. The results showed that overall soil organic C, dissolved organic C (DOC) and soil microbial biomass C (MBC) increased by 1.8, 7.4, and 8.8%, respectively (P<0.05), in response to N enrichment; belowground biomass and litter increased by 14.6 and 24.4%, respectively (P<0.05); and soil respiration increased by 6.1% (P<0.05). N enrichment promoted C inputs into the soil mainly by increasing litter and belowground biomass inputs. Additionally, N enrichment increased C output by increasing soil respiration. Land use type and N addition level had different impacts on the soil C pool and on soil respiration. DOC, MBC, and litter exhibited more positive responses to N deposition in cooler and more arid regions than in other regions. The meta-analysis indicated that N enrichment had a positive impact on belowground C cycles in China. Climate played a greater role than did N deposition level in affecting processes of ecosystem C cycling. Moreover, belowground C cycle processes are determined by complicated interactions among land use type, N enrichment, and climate. Copyright © 2017 Elsevier B.V. All rights reserved.

The impact of cotton growing practices on soil microbiology and its relation to plant and soil health

NASA Astrophysics Data System (ADS)

Pereg, Lily

2013-04-01

Crop production and agricultural practices heavily impact the soil microbial communities, which differ among varying types of soils and environmental conditions. Soil-borne microbial communities in cotton production systems, as in every other cropping system, consist of microbial populations that may either be pathogenic, beneficial or neutral with respect to the cotton crop. Crop production practices have major roles in determining the composition of microbial communities and function of microbial populations in soils. The structure and function of any given microbial community is determined by various factors, including those that are influenced by farming and those not controlled by farming activities. Examples of the latter are environmental conditions such as soil type, temperature, daylight length and UV radiation, air humidity, atmospheric pressure and some abiotic features of the soil. On the other hand, crop production practices may determine other abiotic soil properties, such as water content, density, oxygen levels, mineral and elemental nutrient levels and the load of other crop-related soil amendments. Moreover, crop production highly influences the biotic properties of the soil and has a major role in determining the fate of soil-borne microbial communities associated with the crop plant. Various microbial strains react differently to the presence of certain plants and plant exudates. Therefore, the type of plant and crop rotations are important factors determining microbial communities. In addition, practice management, e.g. soil cultivation versus crop stubble retention, have a major effect on the soil conditions and, thus, on microbial community structure and function. All of the above-mentioned factors can lead to preferential selection of certain microbial population over others. It may affect not only the composition of microbial communities (diversity and abundance of microbial members) but also the function of the community (the ability of different microbes to perform certain activities). Therefore, agricultural practices may determine the ability of beneficial microbes to realise their plant growth promoting potential or the pathogenic expression of others. This presentation will review the current knowledge about the impact of cotton growing practices on microbial communities and soil health in different environments as well as endeavour to identify gaps worthwhile exploring in future research for promoting plant growth in healthy soils.

Device and method for producing a containment barrier underneath and around in-situ buried waste

DOEpatents

Gardner, B.M.; Smith, A.M.; Hanson, R.W.; Hodges, R.T.

1998-08-11

An apparatus is described for building a horizontal underground barrier by cutting through soil and depositing a slurry, preferably on which cures into a hardened material. The apparatus includes a digging means for cutting and removing soil to create a void under the surface of the ground and injection means for inserting barrier-forming material into the void. In one embodiment, the digging means is a continuous cutting chain. Mounted on the continuous cutting chain are cutter teeth for cutting through soil and discharge paddles for removing the loosened soil. This invention includes a barrier placement machine, a method for building an underground horizontal containment barrier using the barrier placement machine, and the underground containment system. Preferably the underground containment barrier goes underneath and around the site to be contained in a bathtub-type containment. 15 figs.

Nutrient Characterization of Rainwater, Soil and Groundwater from Two Different Watersheds, Lake Taihu, China

NASA Astrophysics Data System (ADS)

Thaw, M.; Gao, F.; Yu, Z.; Acharya, K.

2012-12-01

Over the past two decades, an increase of nutrients to Lake Taihu, China has resulted in hyper-eutrophication and the production of severe cyanobacterial blooms. While many past studies have focused on how surface water transports nutrients to the lake, this study seeks to characterize the concentration of nutrients in different media, including rainwater, soil and groundwater from two different watersheds. These two watersheds varied in overall land use, and agricultural sites within each watershed varied by crop type and growing method. Samples were collected from the Meilin watershed, a mix of forest and agricultural land and the Zhangjiagang watershed, which consisted of industrial, urban and agricultural lands. Samples included soils, groundwater and rain water. Soils from each site were characterized by aggregate size class and analyzed for total nitrogen and total phosphorus. Rainwater and groundwater samples were analyzed for total nitrogen and total phosphorus.

Effect of hydraulic hysteresis on the stability of infinite slopes under steady infiltration

USGS Publications Warehouse

Chen, Pan; Mirus, Benjamin B.; Lu, Ning; Godt, Jonathan W.

2017-01-01

Hydraulic hysteresis, including capillary soil water retention (SWR), air entrapment SWR, and hydraulic conductivity, is a common phenomenon in unsaturated soils. However, the influence of hydraulic hysteresis on suction stress, and subsequently slope stability, is generally ignored. This paper examines the influence of each of these three types of hysteresis on slope stability using an infinite slope stability analysis under steady infiltration conditions. First, hypothetical slopes for representative silty and sandy soils are examined. Then a monitored hillslope in the San Francisco Bay Area, California is assessed, using observed rainfall conditions and measured hydraulic and geotechnical properties of the colluvial soil. Results show that profiles of suction stress and the corresponding factor of safety are generally strongly affected by hydraulic hysteresis. Results suggest that each of the three types of hydraulic hysteresis may play a major role in the occurrence of slope failure, indicating that ignoring hydraulic hysteresis will likely lead to underestimates of failure potential and hence to inaccurate slope stability analysis.

Distribution characteristic of soil organic carbon fraction in different types of wetland in Hongze Lake of China.

PubMed

Lu, Yan; Xu, Hongwen

2014-01-01

Soil organic carbon fractions included microbial biomass carbon (MBC), dissolved organic carbon (DOC), and labile organic carbon (LOC), which was investigated over a 0-20 cm depth profile in three types of wetland in Hongze Lake of China. Their ecoenvironmental effect and the relationships with soil organic carbon (SOC) were analyzed in present experiment. The results showed that both active and SOC contents were in order reduced by estuarine wetland, flood plain, and out-of-lake wetland. Pearson correlative analysis indicated that MBC and DOC were positively related to SOC. The lowest ratios of MBC and DOC to SOC in the estuarine wetland suggested that the turnover rate of microbial active carbon pool was fairly low in this kind of wetland. Our results showed that estuarine wetland had a strong carbon sink function, which played important role in reducing greenhouse gas emissions; besides, changes of water condition might affect the accumulation and decomposition of organic carbon in the wetland soils.

Distribution Characteristic of Soil Organic Carbon Fraction in Different Types of Wetland in Hongze Lake of China

PubMed Central

Lu, Yan; Xu, Hongwen

2014-01-01

Soil organic carbon fractions included microbial biomass carbon (MBC), dissolved organic carbon (DOC), and labile organic carbon (LOC), which was investigated over a 0–20 cm depth profile in three types of wetland in Hongze Lake of China. Their ecoenvironmental effect and the relationships with soil organic carbon (SOC) were analyzed in present experiment. The results showed that both active and SOC contents were in order reduced by estuarine wetland, flood plain, and out-of-lake wetland. Pearson correlative analysis indicated that MBC and DOC were positively related to SOC. The lowest ratios of MBC and DOC to SOC in the estuarine wetland suggested that the turnover rate of microbial active carbon pool was fairly low in this kind of wetland. Our results showed that estuarine wetland had a strong carbon sink function, which played important role in reducing greenhouse gas emissions; besides, changes of water condition might affect the accumulation and decomposition of organic carbon in the wetland soils. PMID:24971377

Grazing preference and utilization of soil fungi by Folsomia candida (Collembola)

NASA Astrophysics Data System (ADS)

Hedenec, Petr; Frouz, Jan

2016-04-01

Soil fungi are important food resources for soil fauna. Here we ask whether the collembolan Folsomia candida shows selectivity in grazing between four saprophytic fungi (Penicillium chrysogenum, Penicillium expansum, Absidia glauca, and Cladosporium herbarum), whether grazing preference corresponds to effects on collembolan reproduction, and whether the effects of fungi on grazing and reproduction depends on the fungal substrate, which included three kinds of litter (Alnus glutinosa, Salix caprea, and Quercus robur) and one kind of agar (yeast extract). On agar, Cladosporium herbarum and Absidia glauca were the most preferred fungi and supported the highest collembolan reproduction. On fungal-colonized litter, grazing preference was more affected by litter type than by fungal species whereas collembolan reproduction was affected by both litter type and fungal species. On fungal-colonized litter, the litter type that was most preferred for grazing did not support the highest reproduction, i.e., there was an inconsistency between food preference and suitability. Alder and willow were preferred over oak for grazing, but alder supported the least reproduction.

Filter Membrane Effects on Water-Extractable Phosphorus Concentrations from Soil.

PubMed

Norby, Jessica; Strawn, Daniel; Brooks, Erin

2018-03-01

To accurately assess P concentrations in soil extracts, standard laboratory practices for monitoring P concentrations are needed. Water-extractable P is a common analytical test to determine P availability for leaching from soils, and it is used to determine best management practices. Most P analytical tests require filtration through a filter membrane with 0.45-μm pore size to distinguish between particulate and dissolved P species. However, filter membrane type is rarely specified in method protocols, and many different types of membranes are available. In this study, three common filter membrane materials (polyether sulfone, nylon, and nitrocellulose), all with 0.45-μm pore sizes, were tested for analytical differences in total P concentrations and dissolved reactive P (DRP) concentrations in water extracts from six soils sampled from two regions. Three of the extracts from the six soil samples had different total P concentrations for all three membrane types. The other three soil extracts had significantly different total P results from at least one filter membrane type. Total P concentration differences were as great as 35%. The DRP concentrations in the extracts were dependent on filter type in five of the six soil types. Results from this research show that filter membrane type is an important parameter that affects concentrations of total P and DRP from soil extracts. Thus, membrane type should be specified in soil extraction protocols. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Dryland soil microbial communities display spatial biogeographic patterns associated with soil depth and soil parent material

USGS Publications Warehouse

Steven, Blaire; Gallegos-Graves, La Verne; Belnap, Jayne; Kuske, Cheryl R.

2013-01-01

Biological soil crusts (biocrusts) are common to drylands worldwide. We employed replicated, spatially nested sampling and 16S rRNA gene sequencing to describe the soil microbial communities in three soils derived from different parent material (sandstone, shale, and gypsum). For each soil type, two depths (biocrusts, 0–1 cm; below-crust soils, 2–5 cm) and two horizontal spatial scales (15 cm and 5 m) were sampled. In all three soils, Cyanobacteria and Proteobacteria demonstrated significantly higher relative abundance in the biocrusts, while Chloroflexi and Archaea were significantly enriched in the below-crust soils. Biomass and diversity of the communities in biocrusts or below-crust soils did not differ with soil type. However, biocrusts on gypsum soil harbored significantly larger populations of Actinobacteria and Proteobacteria and lower populations of Cyanobacteria. Numerically dominant operational taxonomic units (OTU; 97% sequence identity) in the biocrusts were conserved across the soil types, whereas two dominant OTUs in the below-crust sand and shale soils were not identified in the gypsum soil. The uniformity with which small-scale vertical community differences are maintained across larger horizontal spatial scales and soil types is a feature of dryland ecosystems that should be considered when designing management plans and determining the response of biocrusts to environmental disturbances.

Mercury contamination in agricultural soils from abandoned metal mines classified by geology and mineralization.

PubMed

Kim, Han Sik; Jung, Myung Chae

2012-01-01

This survey aimed to compare mercury concentrations in soils related to geology and mineralization types of mines. A total of 16,386 surface soils (0~15 cm in depth) were taken from agricultural lands near 343 abandoned mines (within 2 km from each mine) and analyzed for Hg by AAS with a hydride-generation device. To meaningfully compare mercury levels in soils with geology and mineralization types, three subclassification criteria were adapted: (1) five mineralization types, (2) four valuable ore mineral types, and (3) four parent rock types. The average concentration of Hg in all soils was 0.204 mg kg(-1) with a range of 0.002-24.07 mg kg(-1). Based on the mineralization types, average Hg concentrations (mg kg(-1)) in the soils decreased in the order of pegmatite (0.250) > hydrothermal vein (0.208) > hydrothermal replacement (0.166) > skarn (0.121) > sedimentary deposits (0.045). In terms of the valuable ore mineral types, the concentrations decreased in the order of Au-Ag-base metal mines ≈ base metal mines > Au-Ag mines > Sn-W-Mo-Fe-Mn mines. For parent rock types, similar concentrations were found in the soils derived from sedimentary rocks and metamorphic rocks followed by heterogeneous rocks with igneous and metamorphic processes. Furthermore, farmland soils contained relatively higher Hg levels than paddy soils. Therefore, it can be concluded that soils in Au, Ag, and base metal mines derived from a hydrothermal vein type of metamorphic rocks and pegmatite deposits contained relatively higher concentrations of mercury in the surface environment.

Effect of Metal Oxide Nanoparticles on Microbial Community Structure and Function in Two Different Soil Types

PubMed Central

Frenk, Sammy; Ben-Moshe, Tal; Dror, Ishai; Berkowitz, Brian; Minz, Dror

2013-01-01

Increased availability of nanoparticle-based products will, inevitably, expose the environment to these materials. Engineered nanoparticles (ENPs) may thus find their way into the soil environment via wastewater, dumpsters and other anthropogenic sources; metallic oxide nanoparticles comprise one group of ENPs that could potentially be hazardous for the environment. Because the soil bacterial community is a major service provider for the ecosystem and humankind, it is critical to study the effects of ENP exposure on soil bacteria. These effects were evaluated by measuring bacterial community activity, composition and size following exposure to copper oxide (CuO) and magnetite (Fe3O4) nanosized (<50 nm) particles. Two different soil types were examined: a sandy loam (Bet-Dagan) and a sandy clay loam (Yatir), under two ENP concentrations (1%, 0.1%). Results indicate that the bacterial community in Bet-Dagan soil was more susceptible to change due to exposure to these ENPs, relative to Yatir soil. More specifically, CuO had a strong effect on bacterial hydrolytic activity, oxidative potential, community composition and size in Bet-Dagan soil. Few effects were noted in the Yatir soil, although 1% CuO exposure did cause a significant decreased oxidative potential and changes to community composition. Fe3O4 changed the hydrolytic activity and bacterial community composition in Bet-Dagan soil but did not affect the Yatir soil bacterial community. Furthermore, in Bet-Dagan soil, abundance of bacteria annotated to OTUs from the Bacilli class decreased after addition of 0.1% CuO but increased with 1% CuO, while in Yatir soil their abundance was reduced with 1% CuO. Other important soil bacterial groups, including Rhizobiales and Sphingobacteriaceae, were negatively affected by CuO addition to soil. These results indicate that both ENPs are potentially harmful to soil environments. Furthermore, it is suggested that the clay fraction and organic matter in different soils interact with the ENPs and reduce their toxicity. PMID:24349575

The soil microbial community composition and soil microbial carbon uptake are more affected by soil type than by different vegetation types (C3 and C4 plants) and seasonal changes

NASA Astrophysics Data System (ADS)

Griselle Mellado Vazquez, Perla; Lange, Markus; Gleixner, Gerd

2016-04-01

This study investigates the influence of different vegetation types (C3 and C4 plants), soil type and seasonal changes on the soil microbial biomass, soil microbial community composition and soil microbial carbon (C) uptake. We collected soil samples in winter (non-growing season) and summer (growing season) in 2012 from an experimental site cropping C3 and C4 plants for 6 years on two different soil types (sandy and clayey). The amount of phospholipid fatty acids (PLFAs) and their compound-specific δ13C values were used to determined microbial biomass and the flow of C from plants to soil microorganisms, respectively. Higher microbial biomass was found in the growing season. The microbial community composition was mainly explained by soil type. Higher amounts of SOC were driving the predominance of G+ bacteria, actinobacteria and cyclic G- bacteria in sandy soils, whereas root biomass was significantly related to the increased proportions of G- bacteria in clayey soils. Plant-derived C in G- bacteria increased significantly in clayey soils in the growing season. This increase was positively and significantly driven by root biomass. Moreover, changes in plant-derived C among microbial groups pointed to specific capabilities of different microbial groups to decompose distinct sources of C. We concluded that soil texture and favorable growth conditions driven by rhizosphere interactions are the most important factors controlling the soil microbial community. Our results demonstrate that a change of C3 plants vs. C4 plants has only a minor effect on the soil microbial community. Thus, such experiments are well suited to investigate soil organic matter dynamics as they allow to trace the C flow from plants into the soil microbial community without changing the community abundance and composition.

Impact of Rotylenchulus reniformis on Cotton Yield as Affected by Soil Texture and Irrigation

PubMed Central

Herring, Stephanie L.; Heitman, Joshua L.

2010-01-01

The effects of soil type, irrigation, and population density of Rotylenchulus reniformis on cotton were evaluated in a two-year microplot experiment. Six soil types, Fuquay sand, Norfolk sandy loam, Portsmouth loamy sand, Muck, Cecil sandy loam, and Cecil sandy clay, were arranged in randomized complete blocks with five replications. Each block had numerous plots previously inoculated with R. reniformis and two or more noninoculated microplots per soil type, one half of which were irrigated in each replicate for a total of 240 plots. Greatest cotton lint yields were achieved in the Muck, Norfolk sandy loam, and Portsmouth loamy sand soils. Cotton yield in the Portsmouth loamy sand did not differ from the Muck soil which averaged the greatest lint yield per plot of all soil types. Cotton yield was negatively related to R. reniformis PI (initial population density) in all soil types except for the Cecil sandy clay which had the highest clay content. Supplemental irrigation increased yields in the higher yielding Muck, Norfolk sandy loam, and Portsmouth loamy sand soils compared to the lower yielding Cecil sandy clay, Cecil sandy loam, and Fuquay sand soils. The Portsmouth sandy loam was among the highest yielding soils, and also supported the greatest R. reniformis population density. Cotton lint yield was affected more by R. reniformis Pi with irrigation in the Portsmouth loamy sand soil with a greater influence of Pi on lint yield in irrigated plots than other soils. A significant first degree PI × irrigation interaction for this soil type confirms this observation. PMID:22736865

Impact of Rotylenchulus reniformis on Cotton Yield as Affected by Soil Texture and Irrigation.

PubMed

Herring, Stephanie L; Koenning, Stephen R; Heitman, Joshua L

2010-12-01

The effects of soil type, irrigation, and population density of Rotylenchulus reniformis on cotton were evaluated in a two-year microplot experiment. Six soil types, Fuquay sand, Norfolk sandy loam, Portsmouth loamy sand, Muck, Cecil sandy loam, and Cecil sandy clay, were arranged in randomized complete blocks with five replications. Each block had numerous plots previously inoculated with R. reniformis and two or more noninoculated microplots per soil type, one half of which were irrigated in each replicate for a total of 240 plots. Greatest cotton lint yields were achieved in the Muck, Norfolk sandy loam, and Portsmouth loamy sand soils. Cotton yield in the Portsmouth loamy sand did not differ from the Muck soil which averaged the greatest lint yield per plot of all soil types. Cotton yield was negatively related to R. reniformis PI (initial population density) in all soil types except for the Cecil sandy clay which had the highest clay content. Supplemental irrigation increased yields in the higher yielding Muck, Norfolk sandy loam, and Portsmouth loamy sand soils compared to the lower yielding Cecil sandy clay, Cecil sandy loam, and Fuquay sand soils. The Portsmouth sandy loam was among the highest yielding soils, and also supported the greatest R. reniformis population density. Cotton lint yield was affected more by R. reniformis Pi with irrigation in the Portsmouth loamy sand soil with a greater influence of Pi on lint yield in irrigated plots than other soils. A significant first degree PI × irrigation interaction for this soil type confirms this observation.

Influence of landslides on biophysical diversity — A perspective from British Columbia

NASA Astrophysics Data System (ADS)

Geertsema, Marten; Pojar, James J.

2007-09-01

Landslides have long been overlooked or underestimated as important natural disturbance agents. In particular the ecological role of landslides in maintaining biological diversity has been largely ignored. Here we provide a western Canadian ( British Columbian) perspective on the influences of landslides on biophysical diversity, which is related in several ways to biological diversity. We recognize several types of biophysical/ecological diversity: site diversity, soil diversity, and the derivative habitat or ecosystem (including aquatic ecosystems) diversity. There are also a variety of landslide types, depending on materials and on the rate and style of movement. We discuss the roles of different landslide types on various aspects of terrestrial diversity. Landslides are simultaneously depositional and erosional processes that influence sites by redistributing materials and changing surface expression — usually creating a complex microtopography that can include very dry ridges and hummocks, and sometimes depressions with standing water. Landslide impacts to site also influence soil and soil development. Portions of landslides with exposed parent material are set back to the initial stages of soil development and ecological succession. Landslides can also change soil density, structure, porosity, surface texture, chemistry and microclimate. By changing site and soil, landslides also influence habitat. Landslides influence habitat diversity by engendering a mosaic of seral stages (often both primary and secondary), and in overwhelmingly forested landscapes often create nodes or hotspots of non-forested habitat and biota. In some areas, like the boreal forest, there is an important interplay between landslides and fire, while on the coast of British Columbia debris and snow avalanches can be the dominant disturbance agent. Low-gradient and deep-seated landslides are often opportunistically colonized by beaver and other water and shrub-loving fauna. Sag ponds and impounded streams provide aquatic habitat — often with standing dead trees. Landslide rubble and scarps provide denning/nesting habitat, escape terrain, and cliff habitat for vertebrates.

Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China

PubMed Central

Tian, Qin; Taniguchi, Takeshi; Shi, Wei-Yu; Li, Guoqing; Yamanaka, Norikazu; Du, Sheng

2017-01-01

Similar land-use types usually have similar soil properties, and, most likely, similar microbial communities. Here, we assessed whether land-use types or soil chemical properties are the primary drivers of soil microbial community composition, and how changes in one part of the ecosystem affect another. We applied Ion Torrent sequencing to the bacterial and fungal communities of five different land-use (vegetation) types in the Loess Plateau of China. We found that the overall trend of soil quality was natural forest > plantation > bare land. Dominant bacterial phyla consisted of Proteobacteria (42.35%), Actinobacteria (15.61%), Acidobacteria (13.32%), Bacteroidetes (8.43%), and Gemmatimonadetes (6.0%). The dominant fungi phyla were Ascomycota (40.39%), Basidiomycota (38.01%), and Zygomycota (16.86%). The results of Canonical Correspondence Analysis (CCA) and Redundancy Analysis (RDA) based on land-use types displayed groups according to the land-use types. Furthermore, the bacterial communities were mainly organized by soil organic carbon (SOC). The fungal communities were mainly related to available phosphorus (P). The results suggested that the changes of land use type generated changes in soil chemical properties, controlling the composition of microbial community in the semiarid Loess Plateau region. The microbial community could be an indicator for soil quality with respect to ecological restoration. PMID:28349918

Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China

NASA Astrophysics Data System (ADS)

Tian, Qin; Taniguchi, Takeshi; Shi, Wei-Yu; Li, Guoqing; Yamanaka, Norikazu; Du, Sheng

2017-03-01

Similar land-use types usually have similar soil properties, and, most likely, similar microbial communities. Here, we assessed whether land-use types or soil chemical properties are the primary drivers of soil microbial community composition, and how changes in one part of the ecosystem affect another. We applied Ion Torrent sequencing to the bacterial and fungal communities of five different land-use (vegetation) types in the Loess Plateau of China. We found that the overall trend of soil quality was natural forest > plantation > bare land. Dominant bacterial phyla consisted of Proteobacteria (42.35%), Actinobacteria (15.61%), Acidobacteria (13.32%), Bacteroidetes (8.43%), and Gemmatimonadetes (6.0%). The dominant fungi phyla were Ascomycota (40.39%), Basidiomycota (38.01%), and Zygomycota (16.86%). The results of Canonical Correspondence Analysis (CCA) and Redundancy Analysis (RDA) based on land-use types displayed groups according to the land-use types. Furthermore, the bacterial communities were mainly organized by soil organic carbon (SOC). The fungal communities were mainly related to available phosphorus (P). The results suggested that the changes of land use type generated changes in soil chemical properties, controlling the composition of microbial community in the semiarid Loess Plateau region. The microbial community could be an indicator for soil quality with respect to ecological restoration.

A Meta-Analysis of the Impact of Anaerobic Soil Disinfestation on Pest Suppression and Yield of Horticultural Crops

PubMed Central

Shrestha, Utsala; Augé, Robert M.; Butler, David M.

2016-01-01

Anaerobic soil disinfestation (ASD) is a proven but relatively new strategy to control soil borne pests of horticultural crops through anaerobic decomposition of organic soil amendments. The ASD technique has primarily been used to control soil borne pathogens; however, this technique has also shown potential to control plant parasitic nematodes and weeds. ASD can utilize a broad range of carbon (C) amendments and optimization may improve efficacy across environments. In this context, a meta-analysis using a random-effects model was conducted to determine effect sizes of the ASD effect on soil borne pathogens (533 studies), plant parasitic nematodes (91 studies), and weeds (88 studies) compared with unamended controls. Yield response to ASD was evaluated (123 studies) compared to unamended and fumigated controls. We also examined moderator variables for environmental conditions and amendments to explore the impact of these moderators on ASD effectiveness on pests and yield. Across all pathogen types with the exception of Sclerotinia spp., ASD studies show suppression of bacterial, oomycete and fungal pathogens (59 to 94%). Pathogen suppression was effective under all environmental conditions (50 to 94%) and amendment types (53 to 97%), except when amendments were applied at rates less than 0.3 kg m-2. The ASD effect ranged from 15 to 56% for nematode suppression and 32 to 81% for weed suppression, but these differences were not significant. Significant nematode moderators included study type, soil type, sampling depth, incubation period, and use of mixed amendments. Weed suppression due to ASD showed significant heterogeneity for all environmental conditions, confirming that these studies do not share a common effect size. Total crop yield was not reduced by ASD when compared to a fumigant control and yield was significantly higher (30%) compared to an unamended control, suggesting ASD as a feasible option to maintain yield without chemical soil fumigants. We conclude ASD is effective against soil borne pathogens and while not conclusive due to a limited number of studies, we expect the same for nematodes and weeds given observed effect sizes. Findings should assist researchers in exploring ASD efficacy in particular environmental conditions and allow for development of standard treatment protocols. PMID:27617017

Influence of Disturbance on Soil Respiration in Biologically Crusted Soil during the Dry Season

PubMed Central

Feng, Wei; Zhang, Yu-qing; Wu, Bin; Zha, Tian-shan; Jia, Xin; Qin, Shu-gao; Shao, Chen-xi; Liu, Jia-bin; Lai, Zong-rui; Fa, Ke-yu

2013-01-01

Soil respiration (Rs) is a major pathway for carbon cycling and is a complex process involving abiotic and biotic factors. Biological soil crusts (BSCs) are a key biotic component of desert ecosystems worldwide. In desert ecosystems, soils are protected from surface disturbance by BSCs, but it is unknown whether Rs is affected by disturbance of this crust layer. We measured Rs in three types of disturbed and undisturbed crusted soils (algae, lichen, and moss), as well as bare land from April to August, 2010, in Mu Us desert, northwest China. Rs was similar among undisturbed soils but increased significantly in disturbed moss and algae crusted soils. The variation of Rs in undisturbed and disturbed soil was related to soil bulk density. Disturbance also led to changes in soil organic carbon and fine particles contents, including declines of 60–70% in surface soil C and N, relative to predisturbance values. Once BSCs were disturbed, Q 10 increased. Our findings indicate that a loss of BSCs cover will lead to greater soil C loss through respiration. Given these results, understanding the disturbance sensitivity impact on Rs could be helpful to modify soil management practices which promote carbon sequestration. PMID:24453845

Effects of soil type on leaching and runoff transport of rare earth elements and phosphorous in laboratory experiments.

PubMed

Wang, Lingqing; Liang, Tao; Chong, Zhongyi; Zhang, Chaosheng

2011-01-01

Through leaching experiments and simulated rainfall experiments, characteristics of vertical leaching of exogenous rare earth elements (REEs) and phosphorus (P) and their losses with surface runoff during simulated rainfall in different types of soils (terra nera soil, cinnamon soil, red soil, loess soil, and purple soil) were investigated. Results of the leaching experiments showed that vertical transports of REEs and P were relatively low, with transport depths less than 6 cm. The vertical leaching rates of REEs and P in the different soils followed the order of purple soil > terra nera soil > red soil > cinnamon soil > loess soil. Results of the simulated rainfall experiments (83 mm h⁻¹) revealed that more than 92% of REEs and P transported with soil particles in runoff. The loss rates of REEs and P in surface runoff in the different soil types were in the order of loess soil > terra nera soil > cinnamon soil > red soil > purple soil. The total amounts of losses of REEs and P in runoff were significantly correlated.

[Soil infiltration characteristics under main vegetation types in Anji County of Zhejiang Province].

PubMed

Liu, Dao-Ping; Chen, San-Xiong; Zhang, Jin-Chi; Xie, Li; Jiang, Jiang

2007-03-01

The study on the soil infiltration under different main vegetation types in Anji County of Zhejiang Province showed that the characteristics of soil infiltration differed significantly with land use type, and the test eight vegetation types could be classified into four groups, based on soil infiltration capability. The first group, deciduous broadleaved forest, had the strongest soil infiltration capability, and the second group with a stronger soil infiltration capability was composed of grass, pine forest, shrub community and tea bush. Bamboo and evergreen broadleaved forest were classified into the third group with a relatively strong soil infiltration capability, while bare land belonged to the fourth group because of the bad soil structure and poorest soil infiltration capability. The comprehensive parameters of soil infiltration (alpha) and root (beta) were obtained by principal component analysis, and the regression model of alpha and beta could be described as alpha = 0. 1708ebeta -0. 3122. Soil infiltration capability was greatly affected by soil physical and chemical characteristics and root system. Fine roots (< or = 1 mm in diameter) played effective roles on the improvement of soil physical and chemical properties, and the increase of soil infiltration capability was closely related to the amount of the fine roots.

Soil tension mediates isotope fractionation during soil water evaporation

NASA Astrophysics Data System (ADS)

Gaj, Marcel; McDonnell, Jeffrey

2017-04-01

Isotope tracing of the water cycle is increasing in its use and usefulness. Many new studies are extracting soil waters and relating these to streamflow, groundwater recharge and plant transpiration. Nevertheless, unlike isotope fractionation factors from open water bodies, soil water fractionation factors are poorly understood and until now, only empirically derived. In contrast to open water evaporation where temperature, humidity and vapor pressure gradient define fractionation (as codified in the well-known Craig and Gordon model), soil water evaporation includes additionally, fractionation by matrix effects. There is yet no physical explanation of kinetic and equilibrium fraction from soil water within the soil profile. Here we present a simple laboratory experiment with four admixtures of soil grain size (from sand to silt to clay). Oven-dried samples were spiked with water of known isotopic composition at different soil water contents. Soils were then stored in sealed bags and the headspace filled with dry air and allowed to equilibrate for 24hours. Isotopic analysis of the headspace vapor was done with a Los Gatos Inc. water vapor isotope analyzer. Soil water potential of subsamples were measured with a water potential meter. We show for the first time that soil tension controls isotope fractionation in the resident soil water. Below a Pf 3.5 the δ-values of 18O and 2H of the headspace vapor is more positive and increases with increasing soil water potential. Surprisingly, we find that the relationship between soil tension and equilibrium fractionation is independent of soil type. However, δ-values of each soil type plot along a distinct evaporation line. These results indicate that equilibrium fractionation is affected by soil tension in addition to temperature. Therefore, at high soil water tension (under dry conditions) equilibrium fractionation is not consistent with current empirical formulations that ignore these effects. These findings may have implications for plant water uptake studies since plant root water uptake imparts tension to extract water from the soil matrix. Since this is the same physical force as soil water potential, root water uptake at high soil water potential might cause fractionation of soil water. Our work is ongoing to examine these knock-on effects.

An Overview of GIS-Based Modeling and Assessment of Mining-Induced Hazards: Soil, Water, and Forest

PubMed Central

Kim, Sung-Min; Yi, Huiuk; Choi, Yosoon

2017-01-01

In this study, current geographic information system (GIS)-based methods and their application for the modeling and assessment of mining-induced hazards were reviewed. Various types of mining-induced hazard, including soil contamination, soil erosion, water pollution, and deforestation were considered in the discussion of the strength and role of GIS as a viable problem-solving tool in relation to mining-induced hazards. The various types of mining-induced hazard were classified into two or three subtopics according to the steps involved in the reclamation procedure, or elements of the hazard of interest. Because GIS is appropriated for the handling of geospatial data in relation to mining-induced hazards, the application and feasibility of exploiting GIS-based modeling and assessment of mining-induced hazards within the mining industry could be expanded further. PMID:29186922

An Overview of GIS-Based Modeling and Assessment of Mining-Induced Hazards: Soil, Water, and Forest.

PubMed

Suh, Jangwon; Kim, Sung-Min; Yi, Huiuk; Choi, Yosoon

2017-11-27

In this study, current geographic information system (GIS)-based methods and their application for the modeling and assessment of mining-induced hazards were reviewed. Various types of mining-induced hazard, including soil contamination, soil erosion, water pollution, and deforestation were considered in the discussion of the strength and role of GIS as a viable problem-solving tool in relation to mining-induced hazards. The various types of mining-induced hazard were classified into two or three subtopics according to the steps involved in the reclamation procedure, or elements of the hazard of interest. Because GIS is appropriated for the handling of geospatial data in relation to mining-induced hazards, the application and feasibility of exploiting GIS-based modeling and assessment of mining-induced hazards within the mining industry could be expanded further.

Influence of Soil Type and Drainage on Growth of Swamp Chestnut Oak (Quercus Michauxii Nutt.) Seedlings

Treesearch

Donald D. Hook

1969-01-01

Swamp chestnut oak (Quercus michauxii Nutt.) seedlings were grown for 2 years in five soil types in drained and undrained pots. First-year height growth was related to soil type and pot drainage, but second-year height growth was related only to soil type. Results suggest that swamp chestnut oak is site-sensitive. But slow growth, a maximum of 2...

Forestry Tire Tractive Performance: New, Worn, and with Chains

Treesearch

C.R. Vechinski; C.R. Johnson; R.L. Raper; T.P. McDonald

1999-01-01

The tractive perfomance of a new tire, a worn tire, and a worn tire with forestry tire chains was measured in four soil types. Two of the soil types simulated forest-floor conditions with one soil type having a sulfate cover of pine straw and the other having a surface cover of sod. The two remaining soil types were bare. The worn tire with and without chains had...

A combined monitoring and modeling approach to quantify water and nitrate leaching using effective soil column hydraulic properties

NASA Astrophysics Data System (ADS)

Couvreur, V.; Kandelous, M. M.; Moradi, A. B.; Baram, S.; Mairesse, H.; Hopmans, J. W.

2014-12-01

There is a worldwide growing concern for agricultural lands input to groundwater pollution. Nitrate contamination of groundwater across the Central Valley of California has been related to its diverse and intensive agricultural practices. However, there has been no study comparing leaching of nitrate in each individual agricultural land within the complex and diversely managed studied area. A combined field monitoring and modeling approach was developed to quantify from simple measurements the leaching of water and nitrate below the root zone. The monitored state variables are soil water content at several depths within the root zone, soil matric potential at two depths below the root zone, and nitrate concentration in the soil solution. In the modeling part, unsaturated water flow and solute transport are simulated with the software HYDRUS in a soil profile fragmented in up to two soil hydraulic types, whose effective hydraulic properties are optimized with an inverse modeling method. The applicability of the method will first be demonstrated "in-silico", with synthetic soil water dynamics data generated with HYDRUS, and considering the soil column as the layering of several soil types characterized in-situ. The method will then be applied to actual soil water status data from various crops in California including tomato, citrus, almond, pistachio, and walnut. Eventually, improvements of irrigation and fertilization management practices (i.e. mainly questions of quantity and frequency of application minimizing leaching under constraint of water and nutrient availability) will be investigated using coupled modeling and optimization tools.

An ecosystem approach to assess soil quality in organically and conventionally managed farms in Iceland and Austria

NASA Astrophysics Data System (ADS)

van Leeuwen, J. P.; Lehtinen, T.; Lair, G. J.; Bloem, J.; Hemerik, L.; Ragnarsdóttir, K. V.; Gísladóttir, G.; Newton, J. S.; de Ruiter, P. C.

2015-01-01

Intensive agricultural production can be an important driver for the loss of long-term soil quality. For this reason, the European Critical Zone Observatory (CZO) network adopted four pairs of agricultural CZO sites that differ in their management: conventional or organic. The CZO sites include two pairs of grassland farms in Iceland and two pairs of arable farms in Austria. Conventional fields differed from the organic fields in the use of artificial fertilisers and pesticides. Soils of these eight farms were analysed in terms of their physical, chemical, and biological properties, including soil aggregate size distribution, soil organic matter contents, abundance of soil microbes and soil fauna, and taxonomic diversity of soil microarthropods. In Icelandic grasslands, organically farmed soils had larger mean weight diameters of soil aggregates than the conventional farms, while there were no differences on the Austrian farms. Organic farming did not systematically influence organic matter contents or composition, nor soil carbon and nitrogen contents. Also, soil food web structures, in terms of presence of trophic groups of soil organisms, were highly similar among all farms, indicating a low sensitivity of trophic structure to land use or climate. However, soil organism biomass, especially of bacteria and nematodes, was consistently higher on organic farms than on conventional farms. Within the microarthropods, taxonomic diversity was systematically higher in the organic farms compared to the conventional farms. This difference was found across countries and farm, crop, and soil types. The results do not show systematic differences in physical and chemical properties between organic and conventional farms, but confirm that organic farming can enhance soil biomass and that microarthropod diversity is a sensitive and consistent indicator for land management.

Effects of soil spatial variability at the hillslope and catchment scales on characteristics of rainfall-induced landslides

NASA Astrophysics Data System (ADS)

Fan, Linfeng; Lehmann, Peter; Or, Dani

2016-03-01

Spatial variations in soil properties affect key hydrological processes, yet their role in soil mechanical response to hydro-mechanical loading is rarely considered. This study aims to fill this gap by systematically quantifying effects of spatial variations in soil type and initial water content on rapid rainfall-induced shallow landslide predictions at the hillslope- and catchment-scales. We employed a physically-based landslide triggering model that considers mechanical interactions among soil columns governed by strength thresholds. At the hillslope scale, we found that the emergence of weak regions induced by spatial variations of soil type and initial water content resulted in early triggering of landslides with smaller volumes of released mass relative to a homogeneous slope. At the catchment scale, initial water content was linked to a topographic wetness index, whereas soil type varied deterministically with soil depth considering spatially correlated stochastic components. Results indicate that a strong spatial organization of initial water content delays landslide triggering, whereas spatially linked soil type with soil depth promoted landslide initiation. Increasing the standard deviation and correlation length of the stochastic component of soil type increases landslide volume and hastens onset of landslides. The study illustrates that for similar external boundary conditions and mean soil properties, landslide characteristics vary significantly with soil variability, hence it must be considered for improved landslide model predictions.

Role of vegetation in interplay of climate, soil and groundwater recharge in a global dataset

NASA Astrophysics Data System (ADS)

Kim, J. H.; Jackson, R. B.

2010-12-01

Groundwater is an essential resource for people and ecosystems worldwide. Our capacity to ameliorate predicted global water shortages and to maintain sustainable water supplies depend on a better understanding of the controls of recharge and how vegetation change may affect recharge mechanisms. The goals of this study are to quantify the importance of vegetation as a dominant control on recharge globally and to compare the importance of vegetation with other hydrologically important variables, including climate and soil. We based our global analysis on > 500 recharge estimates from the literature that contained information on vegetation, soil and climate or location. Plant functional types significantly affected groundwater recharge rates substantially. After climatic factors (water inputs, PET, and seasonality), vegetation types explained about 15% of the residuals in the dataset. Across all climatic factors, croplands had the highest recharge rates, followed by grasslands, scrublands and woodlands (average recharge: 75, 63, 30, 22 mm/yr respectively). Recharge under woodlands showed the most nonlinear response to water inputs. Differences in recharge between the vegetation types were more exaggerated at arid climates and in clay soils, indicating greater biological control on soil water fluxes in these conditions. Our results shows that vegetation greatly affects recharge rates globally and alters relationship between recharge and physical variables allowing us to better predict recharge rates globally.

Worldwide Abundance and Distribution of Bacillus thuringiensis Isolates

PubMed Central

Martin, Phyllis A. W.; Travers, Russell S.

1989-01-01

We found the insect control agent Bacillus thuringiensis to be a ubiquitous soil microorganism. Using acetate selection to screen soil samples, we isolated B. thuringiensis in 785 of 1,115 soil samples. These samples were obtained in the United States and 29 other countries. A total of 48% of the B. thuringiensis isolates (8,916 isolates) fit the biochemical description of known varieties, while 52% represented undescribed B. thuringiensis types. Over 60% (1,052 isolates) of the isolates tested for toxicity were toxic to insects in the orders Lepidoptera or Diptera. Soil samples were collected from various habitats, including those habitats with different numbers of insects. The current presence of insects did not predict the presence of B. thuringiensis in a particular soil sample. B. thuringiensis was most abundant in samples from Asia. PMID:16348022

[Relationships between soil and rocky desertification in typical karst mountain area based on redundancy analysis].

PubMed

Long, Jian; Liao, Hong-Kai; Li, Juan; Chen, Cai-Yun

2012-06-01

Redundancy analysis (RDA) was employed to reveal the relationships between soil and rocky desertification through vegetation investigation and analysis of soil samples collected in typical karst mountain area of southwest Guizhou Province. The results showed that except TP, TK and ACa, all other variables including SOC, TN, MBC, ROC, DOC, available nutrients and basal respiration showed significant downward trends during the rocky desertification process. RDA results showed significant correlations between different types of desertification and soil variables, described as non-degraded > potential desertification > light desertification > moderate desertification > severe desertification. Moreover, RDA showed that using SOC, TN, AN, and BD as soil indicators, 74.4% of the variance information on soil and rocky desertification could be explained. Furthermore, the results of correlation analysis showed that soil variables were significantly affected by surface vegetation. Considering the ecological function of the aboveground vegetation and the soil quality, Zanthoxylum would be a good choice for restoration of local vegetation in karst mountain area.

Site-level model intercomparison of high latitude and high altitude soil thermal dynamics in tundra and barren landscapes

NASA Astrophysics Data System (ADS)

Ekici, A.; Chadburn, S.; Chaudhary, N.; Hajdu, L. H.; Marmy, A.; Peng, S.; Boike, J.; Burke, E.; Friend, A. D.; Hauck, C.; Krinner, G.; Langer, M.; Miller, P. A.; Beer, C.

2015-07-01

Modeling soil thermal dynamics at high latitudes and altitudes requires representations of physical processes such as snow insulation, soil freezing and thawing and subsurface conditions like soil water/ice content and soil texture. We have compared six different land models: JSBACH, ORCHIDEE, JULES, COUP, HYBRID8 and LPJ-GUESS, at four different sites with distinct cold region landscape types, to identify the importance of physical processes in capturing observed temperature dynamics in soils. The sites include alpine, high Arctic, wet polygonal tundra and non-permafrost Arctic, thus showing how a range of models can represent distinct soil temperature regimes. For all sites, snow insulation is of major importance for estimating topsoil conditions. However, soil physics is essential for the subsoil temperature dynamics and thus the active layer thicknesses. This analysis shows that land models need more realistic surface processes, such as detailed snow dynamics and moss cover with changing thickness and wetness, along with better representations of subsoil thermal dynamics.

Soil ionomic and enzymatic responses and correlations to fertilizations amended with and without organic fertilizer in long-term experiments.

PubMed

Feng, Xumeng; Ling, Ning; Chen, Huan; Zhu, Chen; Duan, Yinghua; Peng, Chang; Yu, Guanghui; Ran, Wei; Shen, Qirong; Guo, Shiwei

2016-04-15

To investigate potential interactions between the soil ionome and enzyme activities affected by fertilization with or without organic fertilizer, soil samples were collected from four long-term experiments over China. Irrespective of variable interactions, fertilization type was the major factor impacting soil ionomic behavior and accounted for 15.14% of the overall impact. Sampling site was the major factor affecting soil enzymatic profile and accounted for 34.25% of the overall impact. The availabilities of Pb, La, Ni, Co, Fe and Al were significantly higher in soil with only chemical fertilizer than the soil with organic amendment. Most of the soil enzyme activities, including α-glucosidase activity, were significantly activated by organic amendment. Network analysis between the soil ionome and the soil enzyme activities was more complex in the organic-amended soils than in the chemical fertilized soils, whereas the network analysis among the soil ions was less complex with organic amendment. Moreover, α-glucosidase was revealed to generally harbor more corrections with the soil ionic availabilities in network. We concluded that some of the soil enzymes activated by organic input can make the soil more vigorous and stable and that the α-glucosidase revealed by this analysis might help stabilize the soil ion availability.

Soil ionomic and enzymatic responses and correlations to fertilizations amended with and without organic fertilizer in long-term experiments

PubMed Central

Feng, Xumeng; Ling, Ning; Chen, Huan; Zhu, Chen; Duan, Yinghua; Peng, Chang; Yu, Guanghui; Ran, Wei; Shen, Qirong; Guo, Shiwei

2016-01-01

To investigate potential interactions between the soil ionome and enzyme activities affected by fertilization with or without organic fertilizer, soil samples were collected from four long-term experiments over China. Irrespective of variable interactions, fertilization type was the major factor impacting soil ionomic behavior and accounted for 15.14% of the overall impact. Sampling site was the major factor affecting soil enzymatic profile and accounted for 34.25% of the overall impact. The availabilities of Pb, La, Ni, Co, Fe and Al were significantly higher in soil with only chemical fertilizer than the soil with organic amendment. Most of the soil enzyme activities, including α-glucosidase activity, were significantly activated by organic amendment. Network analysis between the soil ionome and the soil enzyme activities was more complex in the organic-amended soils than in the chemical fertilized soils, whereas the network analysis among the soil ions was less complex with organic amendment. Moreover, α-glucosidase was revealed to generally harbor more corrections with the soil ionic availabilities in network. We concluded that some of the soil enzymes activated by organic input can make the soil more vigorous and stable and that the α-glucosidase revealed by this analysis might help stabilize the soil ion availability. PMID:27079657

A procedure for estimating Bacillus cereus spores in soil and stream-sediment samples - A potential exploration technique

USGS Publications Warehouse

Watterson, J.R.

1985-01-01

The presence of bacterial spores of the Bacillus cereus group in soils and stream sediments appears to be a sensitive indicator of several types of concealed mineral deposits, including vein-type gold deposits. The B. cereus assay is rapid, inexpensive, and inherently reproducible. The test, currently under investigation for its potential in mineral exploration, is recommended for use on a research basis. Among the aerobic spore-forming bacilli, only B. cereus and closely related strains produce an opaque zone in egg-yolk emulsion agar. This characteristic, also known as the Nagler of lecitho-vitellin reaction, has long been used to rapidly indentify and estimate presumptive B. cereus. The test is here adapted to permit rapid estimation of B. cereus spores in soil and stream-sediment samples. Relative standard deviation was 10.3% on counts obtained from two 40-replicate pour-plate determinations. As many as 40 samples per day can be processed. Enough procedural detail is included to permit investigation of the test in conventional geochemical laboratories using standard microbiological safety precautions. ?? 1985.

USGS/EPA collection protocol for bacterial pathogens in soil

USGS Publications Warehouse

Griffin, Dale W.; Shaefer, F.L.; Charlena Bowling,; Dino Mattorano,; Tonya Nichols,; Erin Silvestri,

2014-01-01

This Sample Collection Procedure (SCP) describes the activities and considerations for the collection of bacterial pathogens from representative surface soil samples (0-5 cm). This sampling depth can be reached without the use of a drill rig, direct-push technology, or other mechanized equipment. This procedure can be used in most soil types but is limited to sampling at or near the ground surface. This protocol has components for two different types of sampling applications: (1) typical sampling, when there is no suspicion of contamination (e.g., surveillance or background studies); and (2) in response to known or suspected accidental contamination (e.g., the presence of animal carcasses). This protocol does not cover sampling in response to a suspected bioterrorist or intentional release event. Surface material is removed to the required depth (0-5 cm) and clean trowel or 50 ml sample tube is used to collect the sample. Sample containers are sealed, bagged, and shipped to the laboratory for analysis. Associated documentation, including a Field Data Log and Chain-of-Custody are also included in this document.

Modeling diffusion and reaction in soils: 9. The Buckingham-Burdine-Campbell equation for gas diffusivity in undisturbed soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moldrup, P.; Olesen, T.; Yamaguchi, T.

1999-08-01

Accurate description of gas diffusivity (ratio of gas diffusion coefficients in soil and free air, D{sub s}/D{sub 0}) in undisturbed soils is a prerequisite for predicting in situ transport and fate of volatile organic chemicals and greenhouse gases. Reference point gas diffusivities (R{sub p}) in completely dry soil were estimated for 20 undisturbed soils by assuming a power function relation between gas diffusivity and air-filled porosity ({epsilon}). Among the classical gas diffusivity models, the Buckingham (1904) expression, equal to the soil total porosity squared, best described R{sub p}. Inasmuch, as their previous works implied a soil-type dependency of D{sub s}/D{submore » 0}({epsilon}) in undisturbed soils, the Buckingham R{sub p} expression was inserted in two soil-type-dependent D{sub s}/D{sub 0}({epsilon}) models. One D{sub s}/D{sub 0}({epsilon}) model is a function of pore-size distribution (the Campbell water retention parameter used in a modified Burdine capillary tube model), and the other is a calibrated, empirical function of soil texture (silt + sand fraction). Both the Buckingham-Burdine-Campbell (BBC) and the Buckingham/soil texture-based D{sub s}/D{sub 0}({epsilon}) models described well the observed soil type effects on gas diffusivity and gave improved predictions compared with soil type independent models when tested against an independent data set for six undisturbed surface soils. This study emphasizes that simple but soil-type-dependent power function D{sub s}/D{sub 0}({epsilon}) models can adequately describe and predict gas diffusivity in undisturbed soil. The authors recommend the new BBC model as basis for modeling gas transport and reactions in undisturbed soil systems.« less

Converging patterns of uptake and hydraulic redistribution of soil water in contrasting woody vegetation types.

Treesearch

F.C. Meinzer; J.R. Brooks; S. Bucci; G. Goldstein; F.G. Scholz; J.M. Arren

2004-01-01

We used concurrent measurements of soil water content and soil water potential (Ψsoil) to assess the effects of Ψsoil on uptake and hydraulic redistribution (HR) of soil water by roots during seasonal drought cycles at six sites characterized by differences in the types and amounts of woody vegetations and...

Soil carbon distribution in Alaska in relation to soil-forming factors

USGS Publications Warehouse

Johnson, K.D.; Harden, J.; McGuire, A.D.; Bliss, N.B.; Bockheim, James G.; Clark, M.R.; Nettleton-Hollingsworth, T.; Jorgenson, M.T.; Kane, E.S.; Mack, M.; O'Donnell, J.; Ping, C.-L.; Schuur, E.A.G.; Turetsky, M.R.; Valentine, D.W.

2011-01-01

The direction and magnitude of soil organic carbon (SOC) changes in response to climate change remain unclear and depend on the spatial distribution of SOC across landscapes. Uncertainties regarding the fate of SOC are greater in high-latitude systems where data are sparse and the soils are affected by sub-zero temperatures. To address these issues in Alaska, a first-order assessment of data gaps and spatial distributions of SOC was conducted from a recently compiled soil carbon database. Temperature and landform type were the dominant controls on SOC distribution for selected ecoregions. Mean SOC pools (to a depth of 1-m) varied by three, seven and ten-fold across ecoregion, landform, and ecosystem types, respectively. Climate interactions with landform type and SOC were greatest in the uplands. For upland SOC there was a six-fold non-linear increase in SOC with latitude (i.e., temperature) where SOC was lowest in the Intermontane Boreal compared to the Arctic Tundra and Coastal Rainforest. Additionally, in upland systems mineral SOC pools decreased as climate became more continental, suggesting that the lower productivity, higher decomposition rates and fire activity, common in continental climates, interacted to reduce mineral SOC. For lowland systems, in contrast, these interactions and their impacts on SOC were muted or absent making SOC in these environments more comparable across latitudes. Thus, the magnitudes of SOC change across temperature gradients were non-uniform and depended on landform type. Additional factors that appeared to be related to SOC distribution within ecoregions included stand age, aspect, and permafrost presence or absence in black spruce stands. Overall, these results indicate the influence of major interactions between temperature-controlled decomposition and topography on SOC in high-latitude systems. However, there remains a need for more SOC data from wetlands and boreal-region permafrost soils, especially at depths > 1 m in order to fully understand the effects of climate on soil carbon in Alaska.

Vegetation types on acid soils of Micronesia

Treesearch

Marjorie C. Falanruw; Thomas G.. Cole; Craig D. Whitesell

1987-01-01

The soils and vegetation of the Caroline high islands, Federated States of Micronesia, are being mapped by the U.S. Department of Agriculture's Forest Service and Soil Conservation Service. By the end of 1987, vegetation maps and reports on Kosrae, Pohnpei, Yap, four Truk Islands, and Palau are expected to be available. To compare soil types with vegetation types...

Some aspects of remediation of contaminated soils

NASA Astrophysics Data System (ADS)

Bech, Jaume; Korobova, Elena; Abreu, Manuela; Bini, Claudio; Chon, Hyo-Taek; Pérez-Sirvent, Carmen; Roca, Núria

2014-05-01

Soils are essential components of the environment, a limited precious and fragile resource, the quality of which should be preserved. The concentration, chemical form and distribution of potential harmful elements in soils depends on parent rocks, weathering, soil type and soil use. However, their concentration can be altered by mismanagement of industrial and mining activities, energy generation, traffic increase, overuse of agrochemicals, sewage sludge and waste disposal, causing contamination, environmental problems and health concerns. Heavy metals, some metalloids and radionuclides are persistent in the environment. This persistence hampers the cost/efficiency of remediation technologies. The choice of the most appropriate soil remediation techniques depends of many factors and essentially of the specific site. This contribution aims to offer an overview of the main remediation methods in contaminated soils. There are two main groups of technologies: the first group dealing with containment and confinement, minimizing their toxicity, mobility and bioavailability. Containment measures include covering, sealing, encapsulation and immobilization and stabilization. The second group, remediation with decontamination, is based on the remotion, clean up and/or destruction of contaminants. This group includes mechanical procedures, physical separations, chemical technologies such as soil washing with leaching or precipitation of harmful elements, soil flushing, thermal treatments and electrokinetic technologies. There are also two approaches of biological nature: bioremediation and phytoremediation. Case studies from Chile, Ecuador, Italy, Korea, Peru, Portugal, Russia and Spain, will be discussed in accordance with the time available.

Variations of Soil Lead in Different Land Uses Along the Urbanization Gradient in the Beijing Metropolitan Area

PubMed Central

Mao, Qizheng; Huang, Ganlin; Ma, Keming; Sun, Zexiang

2014-01-01

Understanding the spatial pattern of soil lead (Pb) levels is essential to protecting human health. Most previous studies have examined soil Pb distributions by either urbanization gradient or land-use type. Few studies, however, have examined both factors together. It remains unclear whether the impacts of land use on soil Pb levels are consistent along the urbanization gradient. To fill this gap, we investigated variations in soil Pb level under different land-use types along the urbanization gradient in Beijing, China. We classified the degree of urbanization as the urban core, transitional zone, or suburban area and the land-use type as industrial area, roadside, residential area, institutional area, road greenbelt, park, or forest. Our results showed that the range of soil Pb levels in Beijing is <1 mg/kg–292 mg/kg, with a mean of 22 mg/kg. Along the urbanization gradient, the mean soil Pb level increased from the suburban area to the urban core. Land-use types have an impact on soil Pb levels, however, when the degree of urbanization is considered, the impact from land use on soil Pb level was only significant in the transitional zone. Parks and road greenbelts were found to have lower soil Pb, primarily due to soil restoration. Roadside and residential areas were found to have higher soil Pb because of traffic emissions, leaded paint, and previous industrial contamination. In the urban core and suburban area, the soil Pb level showed no significant differences among various land-use types. Given the results of soil Pb in various land-use types, we suggest that future studies consider the urbanization gradient in which different land-use samples are located. PMID:24646863

Variations of soil lead in different land uses along the urbanization gradient in the Beijing metropolitan area.

PubMed

Mao, Qizheng; Huang, Ganlin; Ma, Keming; Sun, Zexiang

2014-03-18

Understanding the spatial pattern of soil lead (Pb) levels is essential to protecting human health. Most previous studies have examined soil Pb distributions by either urbanization gradient or land-use type. Few studies, however, have examined both factors together. It remains unclear whether the impacts of land use on soil Pb levels are consistent along the urbanization gradient. To fill this gap, we investigated variations in soil Pb level under different land-use types along the urbanization gradient in Beijing, China. We classified the degree of urbanization as the urban core, transitional zone, or suburban area and the land-use type as industrial area, roadside, residential area, institutional area, road greenbelt, park, or forest. Our results showed that the range of soil Pb levels in Beijing is <1 mg/kg-292 mg/kg, with a mean of 22 mg/kg. Along the urbanization gradient, the mean soil Pb level increased from the suburban area to the urban core. Land-use types have an impact on soil Pb levels, however, when the degree of urbanization is considered, the impact from land use on soil Pb level was only significant in the transitional zone. Parks and road greenbelts were found to have lower soil Pb, primarily due to soil restoration. Roadside and residential areas were found to have higher soil Pb because of traffic emissions, leaded paint, and previous industrial contamination. In the urban core and suburban area, the soil Pb level showed no significant differences among various land-use types. Given the results of soil Pb in various land-use types, we suggest that future studies consider the urbanization gradient in which different land-use samples are located.

Depressional wetland vegetation types: a question of plant commmunity development

Treesearch

Katherine L. Kirkman; Charles P. Goebel; Larry West; Mark B. Drew; Brian Palik

2000-01-01

When wetland restoration includes re-establishing native plant taxa as an objective, an understanding of the variables driving the development of plant communities is necessary. With this in mind, we examined soil and physiographic characteristics of depressional wetlands of three vegetation types (cypressgum swamps, cypress savannas, and grass-sedge marshes) located...

[Effects of land use type on the distribution of organic carbon in different sized soil particles effects of land use type on the distribution of organic carbon in different sized soil particles and its relationships to herb biomass in hilly red soil region of South China].

PubMed

Li, Zhong-Wu; Guo, Wang; Wang, Xiao-Yan; Shen, Wei-Ping; Zhang, Xue; Chen, Xiao-Lin; Zhang, Yue-Nan

2012-04-01

The changes in organic carbon content in different sized soil particles under different land use patterns partly reflect the variation of soil carbon, being of significance in revealing the process of soil organic carbon cycle. Based on the long-term monitoring of soil erosion, and by the methods of soil particle size fractionation, this paper studied the effects of different land use types (wasteland, pinewood land, and grassland) on the distribution of organic carbon content in different sized soil particles and its relationships to the herb biomass. Land use type and slope position had obvious effects on the organic carbon content in different sized soil particles, and the organic carbon content was in the order of grassland > pinewood land > wasteland. The proportion of the organic carbon in different sized soil particles was mainly depended on the land use type, and had little relationships with slope position. According to the analysis of the ratio of particle-associated organic carbon to mineral-associated organic carbon (POC/MOC), the soil organic carbon in grassland was easily to be mineralized, whereas that in wasteland and pinewood land was relatively stable. On the slopes mainly in hilly red soil region, the soil organic carbon in sand fraction had great effects on herb biomass.

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

DOE PAGES

Winston, Max E.; Hampton-Marcell, Jarrad; Zarraonaindia, Iratxe; ...

2014-06-16

Understanding microbial partnerships with the medicinally and economically important crop Cannabis has the potential to affect agricultural practice by improving plant fitness and production yield. Furthermore, Cannabis presents an interesting model to explore plant-microbiome interactions as it produces numerous secondary metabolic compounds. Here we present the first description of the endorhiza-, rhizosphere-, and bulk soil-associated microbiome of five distinct Cannabis cultivars. Bacterial communities of the endorhiza showed significant cultivar-specificity. When controlling cultivar and soil type the microbial community structure was significantly different between plant cultivars, soil types, and between the endorhiza, rhizosphere and soil. In conclusion, the influence of soilmore » type, plant cultivar and sample type differentiation on the microbial community structure provides support for a previously published two-tier selection model, whereby community composition across sample types is determined mainly by soil type, while community structure within endorhiza samples is determined mainly by host cultivar.« less

Understanding Cultivar-Specificity and Soil Determinants of the Cannabis Microbiome

DOE Office of Scientific and Technical Information (OSTI.GOV)

Winston, Max E.; Hampton-Marcell, Jarrad; Zarraonaindia, Iratxe

Understanding microbial partnerships with the medicinally and economically important crop Cannabis has the potential to affect agricultural practice by improving plant fitness and production yield. Furthermore, Cannabis presents an interesting model to explore plant-microbiome interactions as it produces numerous secondary metabolic compounds. Here we present the first description of the endorhiza-, rhizosphere-, and bulk soil-associated microbiome of five distinct Cannabis cultivars. Bacterial communities of the endorhiza showed significant cultivar-specificity. When controlling cultivar and soil type the microbial community structure was significantly different between plant cultivars, soil types, and between the endorhiza, rhizosphere and soil. In conclusion, the influence of soilmore » type, plant cultivar and sample type differentiation on the microbial community structure provides support for a previously published two-tier selection model, whereby community composition across sample types is determined mainly by soil type, while community structure within endorhiza samples is determined mainly by host cultivar.« less

Temporal changes in soil C-N-P stoichiometry over the past 60 years across subtropical China.

PubMed

Yu, Zaipeng; Wang, Minhuang; Huang, Zhiqun; Lin, Teng-Chiu; Vadeboncoeur, Matthew A; Searle, Eric B; Chen, Han Y H

2018-03-01

Controlled experiments have shown that global changes decouple the biogeochemical cycles of carbon (C), nitrogen (N), and phosphorus (P), resulting in shifting stoichiometry that lies at the core of ecosystem functioning. However, the response of soil stoichiometry to global changes in natural ecosystems with different soil depths, vegetation types, and climate gradients remains poorly understood. Based on 2,736 observations along soil profiles of 0-150 cm depth from 1955 to 2016, we evaluated the temporal changes in soil C-N-P stoichiometry across subtropical China, where soils are P-impoverished, with diverse vegetation, soil, and parent material types and a wide range of climate gradients. We found a significant overall increase in soil total C concentration and a decrease in soil total P concentration, resulting in increasing soil C:P and N:P ratios during the past 60 years across all soil depths. Although average soil N concentration did not change, soil C:N increased in topsoil while decreasing in deeper soil. The temporal trends in soil C-N-P stoichiometry differed among vegetation, soil, parent material types, and spatial climate variations, with significantly increased C:P and N:P ratios for evergreen broadleaf forest and highly weathered Ultisols, and more pronounced temporal changes in soil C:N, N:P, and C:P ratios at low elevations. Our sensitivity analysis suggests that the temporal changes in soil stoichiometry resulted from elevated N deposition, rising atmospheric CO 2 concentration and regional warming. Our findings revealed that the responses of soil C-N-P and stoichiometry to long-term global changes have occurred across the whole soil depth in subtropical China and the magnitudes of the changes in soil stoichiometry are dependent on vegetation types, soil types, and spatial climate variations. © 2017 John Wiley & Sons Ltd.

The influence of use-related, environmental, and managerial factors on soil loss from recreational trails.

PubMed

Olive, Nathaniel D; Marion, Jeffrey L

2009-03-01

Recreational uses of unsurfaced trails inevitably result in their degradation, with the type and extent of resource impact influenced by factors such as soil texture, topography, climate, trail design and maintenance, and type and amount of use. Of particular concern, the loss of soil through erosion is generally considered a significant and irreversible form of trail impact. This research investigated the influence of several use-related, environmental, and managerial factors on soil loss on recreational trails and roads at Big South Fork National River and Recreation Area, a unit of the U.S. National Park Service. Regression modeling revealed that trail position, trail slope alignment angle, grade, water drainage, and type of use are significant determinants of soil loss. The introduction of individual and groups of variables into a series of regression models provides improved understanding and insights regarding the relative influence of these variables, informing the selection of more effective trail management actions. Study results suggest that trail erosion can be minimized by avoiding "fall-line" alignments, steep grades, and valley-bottom alignments near streams, installing and maintaining adequate densities of tread drainage features, applying gravel to harden treads, and reducing horse and all-terrain vehicle use or restricting them to more resistant routes. This research also sought to develop a more efficient Variable Cross-Sectional Area method for assessing soil loss on trails. This method permitted incorporation of CSA measures in a representative sampling scheme applied to a large (24%) sample of the park's 526 km trail system. The variety of soil loss measures derived from the Variable CSA method, including extrapolated trail-wide soil loss estimates, permit an objective quantification of soil erosion on recreational trails and roads. Such data support relational analyses to increase understanding of trail degradation, and long-term monitoring of the natural and recreational integrity of the trail system infrastructure.

The influence of use-related, environmental, and managerial factors on soil loss from recreational trails

USGS Publications Warehouse

Olive, Nathaniel D.; Marion, Jeffrey L.

2009-01-01

Recreational uses of unsurfaced trails inevitably result in their degradation, with the type and extent of resource impact influenced by factors such as soil texture, topography, climate, trail design and maintenance, and type and amount of use. Of particular concern, the loss of soil through erosion is generally considered a significant and irreversible form of trail impact. This research investigated the influence of several use-related, environmental, and managerial factors on soil loss on recreational trails and roads at Big South Fork National River and Recreation Area, a unit of the U.S. National Park Service. Regression modeling revealed that trail position, trail slope alignment angle, grade, water drainage, and type of use are significant determinants of soil loss. The introduction of individual and groups of variables into a series of regression models provides improved understanding and insights regarding the relative influence of these variables, informing the selection of more effective trail management actions. Study results suggest that trail erosion can be minimized by avoiding “fall-line” alignments, steep grades, and valley-bottom alignments near streams, installing and maintaining adequate densities of tread drainage features, applying gravel to harden treads, and reducing horse and all-terrain vehicle use or restricting them to more resistant routes.This research also sought to develop a more efficient Variable Cross-Sectional Area method for assessing soil loss on trails. This method permitted incorporation of CSA measures in a representative sampling scheme applied to a large (24%) sample of the park's 526 km trail system. The variety of soil loss measures derived from the Variable CSA method, including extrapolated trail-wide soil loss estimates, permit an objective quantification of soil erosion on recreational trails and roads. Such data support relational analyses to increase understanding of trail degradation, and long-term monitoring of the natural and recreational integrity of the trail system infrastructure.

Impact of land use change on soil organic matter dynamics in subalpine grassland

NASA Astrophysics Data System (ADS)

Meyer, Stefanie; Leifeld, Jens; Bahn, Michael; Fuhrer, Jürg

2010-05-01

Information regarding the response of soil organic matter (SOM) in soils to past and expected future land use changes in the European Alps is scarce. Understanding this response requires knowledge of size and residence times of SOM fractions with distinct stabilities. In order to quantify differences between types of land use in the amount, distribution and turnover rates of soil organic carbon (SOC) in subalpine grassland soils, we used soil aggregate and SOM density fractionation in combination with 14C dating. Samples were taken along gradients of different types of land use from meadow (M) to pasture (P) and to abandoned grassland (A) in the Stubai Valley and in the Matsch Valley. Sampling sites in both areas were located at equal altitude (1880 m and 1820 m, respectively) with the same parent material and soil type, but the Matsch Valley receives 400-500 mm less annual rainfall. SOC stocks in the top 10 cm were 2.47 ± 0.32 (M), 2.75 ± 0.32 (P), and 2.50 ± 0.31 kg C/m2 (A) in the Stubai Valley and 2.25 ± 0.14 (M), 3.45 ± 0.22 (P), 3.16 ± 0.27 kg C/m2(A) in the Matsch Valley. Three aggregate size classes were separated by wet sieving: 2 mm. The light floating fraction (wPOM, ρ >1 g/cm3) was included in the analysis. Free (f-) and occluded particulate organic matter (oPOM) were isolated from each aggregate size class (ρ >1.6 g/cm3). At both locations, more than 80% of SOC was stored in small (0.25-2 mm) and large (>2 mm) macroaggregates, but no trend in relation to the different types of land use could be detected. The fraction of C in fPOM and in oPOM in all aggregate size classes was highest for soil from abandoned grasslands. The bulk soil of the abandoned site in the Stubai Valley showed a significantly higher share of fPOM-C and oPOM-C and a higher amount of wPOM-C as compared to the soil from managed grassland, whereas in the Matsch Valley pasture soil had a significantly higher wPOM-C content. At both sites, 13C natural abundance analyses revealed a gradient in 13C between density fractions. wPOM was particularly useful to reveal differences between sampling sites. Radiocarbon values emphasized the importance of this fraction for the calculation of the turnover of bulk soil C. wPOM turned out to be the most active fraction turning over in 2-4 years. Bulk SOC turnover time was approximately 46 years for pasture soil and 78 years for meadow soil. In conclusion, density fractionation produced homogenous fractions allowing detection of differences between different land use types. However, C distribution among aggregates did not systematically differ.

An ecosystem approach to assess soil quality in organically and conventionally managed farms in Iceland and Austria

NASA Astrophysics Data System (ADS)

van Leeuwen, J. P.; Lehtinen, T.; Lair, G. J.; Bloem, J.; Hemerik, L.; Ragnarsdóttir, K. V.; Gísladóttir, G.; Newton, J. S.; de Ruiter, P. C.

2014-06-01

Intensive agricultural production can be an important driver for the loss of long-term soil quality. For this reason, the European Critical Zone Observatory (CZO) network adopted four pairs of agricultural CZO sites that differ in their management: conventional or organic. The CZO sites include two pairs of grassland farms in Iceland and two pairs of arable farms in Austria. Conventional fields differed from the organic fields in the use of artificial fertilizers and pesticides. Soils of these eight farms were analysed in terms of their physical, chemical, and biological properties, including soil aggregate size distribution, soil organic matter contents, abundance of soil microbes and soil fauna, and taxonomic diversity of soil microarthropods. In Icelandic grasslands, organically farmed soils had larger mean weight diameters than the conventional farms, while there were no differences in the Austrian farms. Organic farming did neither systematically influence organic matter contents or composition, nor soil carbon and nitrogen contents. Also soil food web structures, in terms of presence of trophic groups of soil organisms, were highly similar among all farms, indicating a low sensitivity of trophic structure to land use or climate. However, soil organism biomass, especially of bacteria and nematodes, was consistently higher in organic farms than in conventional farms. Within the microarthropods, also taxonomic diversity was systematically higher in the organic farms compared to the conventional farms. This difference was found across countries, farm-, crop- and soil-types. The results do not show systematic differences in physical and chemical properties between organic and conventional farms, but confirm that organic farming can enhance soil organism biomass, and that microarthropod diversity is a sensitive and consistent indicator for land management.

Mechanisms of Soil Aggregation: a biophysical modeling framework

NASA Astrophysics Data System (ADS)

Ghezzehei, T. A.; Or, D.

2016-12-01

Soil aggregation is one of the main crosscutting concepts in all sub-disciplines and applications of soil science from agriculture to climate regulation. The concept generally refers to adhesion of primary soil particles into distinct units that remain stable when subjected to disruptive forces. It is one of the most sensitive soil qualities that readily respond to disturbances such as cultivation, fire, drought, flooding, and changes in vegetation. These changes are commonly quantified and incorporated in soil models indirectly as alterations in carbon content and type, bulk density, aeration, permeability, as well as water retention characteristics. Soil aggregation that is primarily controlled by organic matter generally exhibits hierarchical organization of soil constituents into stable units that range in size from a few microns to centimeters. However, this conceptual model of soil aggregation as the key unifying mechanism remains poorly quantified and is rarely included in predictive soil models. Here we provide a biophysical framework for quantitative and predictive modeling of soil aggregation and its attendant soil characteristics. The framework treats aggregates as hotspots of biological, chemical and physical processes centered around roots and root residue. We keep track of the life cycle of an individual aggregate from it genesis in the rhizosphere, fueled by rhizodeposition and mediated by vigorous microbial activity, until its disappearance when the root-derived resources are depleted. The framework synthesizes current understanding of microbial life in porous media; water holding and soil binding capacity of biopolymers; and environmental controls on soil organic matter dynamics. The framework paves a way for integration of processes that are presently modeled as disparate or poorly coupled processes, including storage and protection of carbon, microbial activity, greenhouse gas fluxes, movement and storage of water, resistance of soils against erosion.

Microbial respiration and DOC composition in leachates from Holocene and Pleistocene soils from the Kolyma River basin in Eastern Siberia

NASA Astrophysics Data System (ADS)

Lewis, K.; Schade, J. D.; Sobczak, W. V.; Holmes, R. M.; Zimov, N.; Bulygina, E. B.; Chandra, S.; Bunn, A. G.; Russell-Roy, L.; Seybold, E. C.

2010-12-01

Permafrost is generally considered a long-term sink for carbon that remains locked away from the global carbon cycle. Anthropogenic climate change is likely to lead to thawing of permafrost and deepening of the soil active layer. Consequently, this carbon sink may become unlocked and available for bacterial decomposition, returning stored carbon to the active carbon cycle, with potentially severe consequences for atmospheric CO2 concentrations. The Kolyma watershed, in the Eastern Siberian Arctic, is underlain by continuous permafrost, often referred to as Yedoma, which provides a unique environment to study potential consequences of permafrost thaw for carbon dynamics in aquatic and terrestrial ecosystems. In order to predict the potential consequences of a major carbon input from thawing permafrost, we assessed the relative bioavailabilty of soil carbon by measuring rates of microbial consumption and changes in DOM composition in soil leachates. At two spatially distinct sample sites, soil was collected throughout the profile from the active layer and from permafrost, including soils from both Holocene and Pleistocene-era permafrost. To evaluate the rates of carbon processing and potential linkages to N and P cycles, we conducted a series of bottle experiments in which we measured biological oxygen demand as a proxy for carbon processing and assessed changes in the composition of dissolved organic carbon using spectral analyses. Experiments were conducted on leachate collected from each soil type. Each experiment included treatments in which leachates were enriched with nitrogen and phosphorus to determine whether carbon processing in soils was nutrient limited. We found substantial variation in oxygen consumption, with Yedoma soils generally exhibiting higher rates than Holocene soils, suggesting higher concentrations of labile carbon. We found no evidence of nutrient limitation of carbon processing in any soil leachates. Spectral slope analysis suggests that carbon processing increased the proportion of heavy aromatic carbon compounds in all but one soil type, suggesting that small molecular weight compounds are consumed first. The exception was the most active Yedoma soil, which showed the opposite effect, indicating an increase in the proportion of small molecules due to the presence of a different, and perhaps more digestible, form of carbon. These results suggest strong spatial variation in the amount and form of available carbon, as well as qualitative differences in the dynamics of carbon processing.

Changes in Carbon Chemistry and Stability Along Deep Tropical Soil Profiles at the Luquillo Critical Zone Observatory

NASA Astrophysics Data System (ADS)

Stone, M.; Hockaday, W. C.; Plante, A. F.

2014-12-01

Tropical forests are the largest terrestrial carbon (C) sink, and tropical forest soils contribute disproportionately to the poorly-characterized deep soil C pool. The goal of this study was to evaluate how carbon chemistry and stability change with depth in tropical forest soils formed on two contrasting parent materials. We used soils from pits excavated to 140 cm depth that were stratified across two soil types (Oxisols and Inceptisols) at the Luquillo Critical Zone Observatory in northeast Puerto Rico. We used 13C nuclear magnetic resonance (NMR) spectroscopy to characterize soil C chemistry and differential scanning calorimetry (DSC) coupled with evolved gas analysis (CO2-EGA) to evaluate the thermal stability of soil C during ramped combustion. Thirty-four samples with an initial C concentration ≥1% were chosen from discrete depth intervals (0, 30, 60, 90 & 140 cm) for 13C NMR analysis, while DSC was performed on 122 samples that included the NMR sample set and additional samples at 20, 50, 80 and 110 cm depth. Preliminary 13C NMR results indicate higher alkyl : O-alkyl ratios and an enrichment of aliphatic and proteinaceous C with depth, compared with greater aromatic and carbohydrate signals in surface soils. The energy density of soil C (J mg-1 C) also declined significantly with depth. In Oxisols, most CO2 evolution from combustion occurred around 300ºC, while most CO2 evolution occurred at higher temperatures (400-500ºC) in Inceptisols. Our findings suggest soil C is derived primarily of plant biomolecules in surface soils and becomes increasingly microbial with depth. Soil matrix-mediated differences in C transport and preservation may result in differences in C chemistry between the two soil types and a more thermally labile C pool in the Oxisols. We suggest that energy-poor substrates, combined with potentially stronger organo-mineral interactions in subsoils, may explain the long-term stability of deep C in highly weathered tropical soils.

Using Electromagnetic Induction Technique to Detect Hydropedological Dynamics: Principles and Applications

NASA Astrophysics Data System (ADS)

Zhu, Qing; Liao, Kaihua; Doolittle, James; Lin, Henry

2014-05-01

Hydropedological dynamics including soil moisture variation, subsurface flow, and spatial distributions of different soil properties are important parameters in ecological, environmental, hydrological, and agricultural modeling and applications. However, technical gap exists in mapping these dynamics at intermediate spatial scale (e.g., farm and catchment scales). At intermediate scales, in-situ monitoring provides detailed data, but is restricted in number and spatial coverage; while remote sensing provides more acceptable spatial coverage, but has comparatively low spatial resolution, limited observation depths, and is greatly influenced by the surface condition and climate. As a non-invasive, fast, and convenient geophysical tool, electromagnetic induction (EMI) measures soil apparent electrical conductivity (ECa) and has great potential to bridge this technical gap. In this presentation, principles of different EMI meters are briefly introduced. Then, case studies of using repeated EMI to detect spatial distributions of subsurface convergent flow, soil moisture dynamics, soil types and their transition zones, and different soil properties are presented. The suitability, effectiveness, and accuracy of EMI are evaluated for mapping different hydropedological dynamics. Lastly, contributions of different hydropedological and terrain properties on soil ECa are quantified under different wetness conditions, seasons, and land use types using Classification and Regression Tree model. Trend removal and residual analysis are then used for further mining of EMI survey data. Based on these analyses, proper EMI survey designs and data processing are proposed.

Oribatid mites in soil toxicity testing-the use of Oppia nitens (C.L. Koch) as a new test species.

PubMed

Princz, Juliska I; Behan-Pelletier, Valerie M; Scroggins, Richard P; Siciliano, Steven D

2010-04-01

Few soil invertebrate species are available for the toxic assessment of soils from boreal or other northern ecozones, yet these soils cover the majority of Canada's landmass as well as significant portions of Eurasia. Oppia nitens (C.L. Koch) is an herbivorous and fungivorous oribatid mite found in soil throughout Holarctic regions, including Canada. Soil tests using O. nitens were performed using 15 different forest soil types and horizons to investigate test variability in adult survival and reproduction. Adult survival (86.1 +/- 1.1%) was consistent across soil types, with a coefficient of variation (CV) of 15%. However, reproduction varied significantly, ranging from 2.9 (+/-1.1) to 86.2 (+/-11.7) individuals, with a corresponding CV of 118 and 30%, respectively. Of the soil factors assessed (NH(3), NO(3), pH, phosphorus [P], organic matter content (OM), carbon:nitrogen (C:N), sand, silt, clay, and sodium adsorption ratio), soil organic matter (OM) explained 68% of the variation observed for reproduction. Increasing the OM using Sphagnum sp. peat moss resulted in optimal reproduction at 7% OM (8% peat content) with the lowest variability (CV of 20%). When assessing the toxicity of a reference chemical, boric acid, the effect of peat amendment reduced lethality to adults with no observable difference on reproduction. The use an age-synchronized culture reduced the test variability for reproduction relative to the use of unsynchronized cultures. Oppia nitens is a good candidate species for a standardized test design, with adult survival easily assessed in a relatively simple design. A long-term reproduction test with O. nitens will require the use of a synchronized population and, on occasion, OM amendment when testing soils with low organic matter content. (c) 2009 SETAC.

A modeling approach to soil type and precipitation seasonality interactions on bioenergy crop production

USDA-ARS?s Scientific Manuscript database

Precipitation limits primary production by affecting soil moisture, and soil type interacts with soil moisture to determine soil water availability to plants. We used ALMANAC, a process-based model, to simulate switchgrass (Panicum virgatum var. Alamo) biomass production in Central Texas under thre...

Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs.

PubMed

Videmsek, Urska; Hagn, Alexandra; Suhadolc, Marjetka; Radl, Viviane; Knicker, Heike; Schloter, Michael; Vodnik, Dominik

2009-07-01

Gaseous conditions at natural CO2 springs (mofettes) affect many processes in these unique ecosystems. While the response of plants to extreme and fluctuating CO2 concentrations ([CO2]) is relatively well documented, little is known on microbial life in mofette soil. Therefore, it was the aim of this study to investigate the abundance and diversity of CO2-fixing bacteria in grassland soils in different distances to a natural carbon dioxide spring. Samples of the same soil type were collected from the Stavesinci mofette, a natural CO2 spring which is known for very pure CO2 emissions, at different distances from the CO2 releasing vents, at locations that clearly differed in soil CO2 efflux (from 12.5 to over 200 micromol CO2 m(-2) s(-1) yearly average). Bulk and rhizospheric soil samples were included into analyses. The microbial response was followed by a molecular analysis of cbbL genes, encoding for the large subunit of RubisCO, a carboxylase which is of crucial importance for C assimilation in chemolitoautotrophic microbes. In all samples analyzed, the "red-like" type of cbbL genes could be detected. In contrast, the "green-like" type of cbbL could not be measured by the applied technique. Surprisingly, a reduction of "red-like" cbbL genes copies was observed in bulk soil and rhizosphere samples from the sites with the highest CO2 concentrations. Furthermore, the diversity pattern of "red-like" cbbL genes changed depending on the CO(2) regime. This indicates that only a part of the autotrophic CO2-fixing microbes could adapt to the very high CO2 concentrations and adverse life conditions that are governed by mofette gaseous regime.

Analysis of Environmental Contamination resulting from Catastrophic Incidents: Part two: Building Laboratory Capability by Selecting and Developing Analytical Methodologies

EPA Science Inventory

Catastrophic incidents can generate a large number of samples with analytically diverse types including forensic, clinical, environmental, food, and others. Environmental samples include water, wastewater, soil, air, urban building and infrastructure materials, and surface resid...

Soil fertility controls soil-atmosphere carbon dioxide and methane fluxes in a tropical landscape converted from lowland forest to rubber and oil palm plantations

NASA Astrophysics Data System (ADS)

Hassler, E.; Corre, M. D.; Tjoa, A.; Damris, M.; Utami, S. R.; Veldkamp, E.

2015-10-01

Expansion of palm oil and rubber production, for which global demand is increasing, causes rapid deforestation in Sumatra, Indonesia, and is expected to continue in the next decades. Our study aimed to (1) quantify changes in soil CO2 and CH4 fluxes with land-use change and (2) determine their controlling factors. In Jambi Province, Sumatra, we selected two landscapes on heavily weathered soils that differ mainly in texture: loam and clay Acrisol soils. In each landscape, we investigated the reference land-use types (forest and secondary forest with regenerating rubber) and the converted land-use types (rubber, 7-17 years old, and oil palm plantations, 9-16 years old). We measured soil CO2 and CH4 fluxes monthly from December 2012 to December 2013. Annual soil CO2 fluxes from the reference land-use types were correlated with soil fertility: low extractable phosphorus (P) coincided with high annual CO2 fluxes from the loam Acrisol soil that had lower fertility than the clay Acrisol soil (P < 0.05). Soil CO2 fluxes from the oil palm (107.2 to 115.7 mg C m-2 h-1) decreased compared to the other land-use types (between 178.7 and 195.9 mg C m-2 h-1; P < 0.01). Across land-use types, annual CO2 fluxes were positively correlated with soil organic carbon (C) and negatively correlated with 15N signatures, extractable P and base saturation. This suggests that the reduced soil CO2 fluxes from oil palm were the result of strongly decomposed soil organic matter and reduced soil C stocks due to reduced litter input as well as being due to a possible reduction in C allocation to roots due to improved soil fertility from liming and P fertilization in these plantations. Soil CH4 uptake in the reference land-use types was negatively correlated with net nitrogen (N) mineralization and soil mineral N, suggesting N limitation of CH4 uptake, and positively correlated with exchangeable aluminum (Al), indicating a decrease in methanotrophic activity at high Al saturation. Reduction in soil CH4 uptake in the converted land-use types (ranging from -3.0 to -14.9 μg C m-2 h-1) compared to the reference land-use types (ranging from -20.8 to -40.3 μg C m-2 h-1; P < 0.01) was due to a decrease in soil N availability in the converted land-use types. Our study shows for the first time that differences in soil fertility control the soil-atmosphere exchange of CO2 and CH4 in a tropical landscape, a mechanism that we were able to detect by conducting this study on the landscape scale.

Nitrogen amendments have predictable effects on soil microbial communities and processes

NASA Astrophysics Data System (ADS)

Ramirez, K. S.; Craine, J. M.; Fierer, N.

2011-12-01

Ecosystems worldwide are receiving increasing amounts of reactive nitrogen (N) through anthropogenic activities. While there has been much effort devoted to quantifying aboveground impacts of anthropogenic N effects, less work has focused on identifying belowground impacts. Bacteria play critical roles in ecosystem processes and identifying how anthropogenic N impacts bacterial communities may elucidate how critical microbially-mediated ecosystem functions are altered by N additions. In order to connect changes in soil processes to changes in the microbial community, we need to first determine if the changes are consistent across different soil types and ecosystems. We assessed the patterns of N effects across a variety of ecosystems in two ways. First, utilizing long-term experimental N gradients at Cedar Creek LTER, MN and Kellogg Biological Station LTER, MI, we examined the response of microbial communities to anthropogenic N additions. Using high-throughput pyrosequencing techniques we quantified changes in soil microbial communities across the nitrogen gradients. We observed strong directional shifts in community composition at both sites; N fertilization consistently impacted both the phylogenetic and taxonomic structure of soil bacterial community structure in a predictable manner regardless of ecosystem type. For example, at both sites Acidobacteria experienced significant declines as nitrogen increased, while other groups such as Actinobacteria and Bacteroidetes increased in relative abundance. Our results suggest that bacterial communities across these N fertility gradients are structured by either nitrogen and/or soil carbon availability, rather than by shifts in the plant community or soil pH indirectly associated with the elevated nitrogen inputs. Still, this field-work does not incorporate changes in soil processes (e.g. soil respiration) or microbial activity (e.g. microbial biomass and extracellular enzyme activity), or separate N from C effects. To address these factors, we performed a lab experiment, amending 30 soils collected from across North America with inorganic N. From this year-long incubation we obtained soil respiration, microbial biomass, bacterial community and extracellular enzyme activity measurements. Across all soil types we consistently observed a significant decrease in both soil respiration, approximately 10%, and microbial biomass, approximately 35%. Using high-throughput pyrosequencing we identified seven bacterial groups that responded significantly to the N additions, including those observed in our field survey. Together, this work suggests that increases in soil N shifts the functional capabilities of the microbial community and highlights possibly mechanisms behind the observed changes.

Application and evaluation of the washing effect in the collector well using pilot plant with washing device

NASA Astrophysics Data System (ADS)

Cho, K. H.; Kim, B. J.; Choi, N. C.; Lee, S. J.; Lee, B. H.

2012-04-01

Riverbed/bank filtration (RBF) is a natural process used as a first step in drinking water treatment. RBF systems consist of well fields that draw water from an aquifer that is hydraulically connected to surface waters. The benefits of RBF are multiple and include a reduction of turbidity, total coliform, microbial contaminants natural organic matter, and organic contaminants. Some of the disadvantages of RBF include the difficulty of preventing river water from infiltrating the aquifer in in-stances of severe river contamination, the geochemical reaction of the infiltrate with aquifer materials that may raise the aqueous concentrations of Fe2+, Mn2+, As, NH4+, CH4, Ca2+ and HCO3- , and clogging of the riverbed. For example, has demonstrated that riverbed clogging may decrease the specific capacity of RBF wells (flow reduction in the collector well etc.). The objective of this study is to optimization and evaluation the washing effect on various nozzle type and intervals, soil retention rate in the collector well using pilot plant with washing device for prevention flow reduction in the collector well. The Pilot plant experiments were conducted under various conditions; two kinds nozzle type (spray nozzle of circle type (single - Full Cone, multi - Hollow Cone) and spray nozzle of fan shape type (Veejet)), two different nozzle intervals (200 mm, 400mm) and a various soil retention rate in the collector well (10 ~ 40%). The results of experiment showed that in the nozzle type case, the washing effect of the veeject nozzle was more effective than other (Full Cone, Hollow Cone) nozzle through spray results (range, strength and height). In the nozzle interval conditions, washing effect is 200 mm better than 400 mm through spray distance and soil height. The washing efficiency in the collector well increased on soil retention rate decreased and the nozzle injection pressure increased using washing device

Comparative Efficiency of the Fenwick Can and Schuiling Centrifuge in Extracting Nematode Cysts from Different Soil Types

PubMed Central

Bellvert, Joaquim; Crombie, Kieran; Horgan, Finbarr G.

2008-01-01

The Fenwick can and Schuiling centrifuge are widely used to extract nematode cysts from soil samples. The comparative efficiencies of these two methods during cyst extraction have not been determined for different soil types under different cyst densities. Such information is vital for statutory laboratories that must choose a method for routine, high-throughput soil monitoring. In this study, samples of different soil types seeded with varying densities of potato cyst nematode (Globodera rostochiensis) cysts were processed using both methods. In one experiment, with 200 ml samples, recovery was similar between methods. In a second experiment with 500 ml samples, cyst recovery was higher using the Schuiling centrifuge. For each method and soil type, cyst extraction efficiency was similar across all densities tested. Extraction was efficient from pure sand (Fenwick 72%, Schuiling 84%) and naturally sandy soils (Fenwick 62%, Schuiling 73%), but was significantly less efficient from clay-soil (Fenwick 42%, Schuiling 44%) and peat-soil with high organic matter content (Fenwick 35%, Schuiling 33%). Residual moisture (<10% w/w) in samples prior to analyses reduced extraction efficiency, particularly for sand and sandy soils. For each soil type and method, there were significant linear relationships between the number of cysts extracted and the numbers of cysts in the samples. We discuss the advantages and disadvantages of each extraction method for cyst extraction in statutory soil laboratories. PMID:19259516

Decontaminating soil organic pollutants with manufactured nanoparticles.

PubMed

Li, Qi; Chen, Xijuan; Zhuang, Jie; Chen, Xin

2016-06-01

Organic pollutants in soils might threaten the environmental and human health. Manufactured nanoparticles are capable to reduce this risk efficiently due to their relatively large capacity of sorption and degradation of organic pollutants. Stability, mobility, and reactivity of nanoparticles are prerequisites for their efficacy in soil remediation. On the basis of a brief introduction of these issues, this review provides a comprehensive summary of the application and effectiveness of various types of manufactured nanoparticles for removing organic pollutants from soil. The main categories of nanoparticles include iron (oxides), titanium dioxide, carbonaceous, palladium, and amphiphilic polymeric nanoparticles. Their advantages (e.g., unique properties and high sorption capacity) and disadvantages (e.g., high cost and low recovery) for soil remediation are discussed with respect to the characteristics of organic pollutants. The factors that influence the decontamination effects, such as properties, surfactants, solution chemistry, and soil organic matter, are addressed.

The impact of warfare on the soil environment

NASA Astrophysics Data System (ADS)

Certini, Giacomo; Scalenghe, Riccardo; Woods, William I.

2013-12-01

One of the most dramatic ways humans can affect soil properties is through the performance of military activities. Warfare-induced disturbances to soil are basically of three types - physical, chemical, and biological - and are aimed at causing direct problems to enemies or, more often, are indirect, undesired ramifications. Physical disturbances to soil include sealing due to building of defensive infrastructures, excavation of trenches or tunnels, compaction by traffic of machinery and troops, or cratering by bombs. Chemical disturbances consist of the input of pollutants such as oil, heavy metals, nitroaromatic explosives, organophosphorus nerve agents, dioxins from herbicides, or radioactive elements. Biological disturbances occur as unintentional consequences of the impact on the physical and chemical properties of soil or the deliberate introduction of microorganisms lethal to higher animals and humans such as botulin or anthrax. Soil represents a secure niche where such pathogens can perpetuate their virulence for decades.

A method for soil moisture probes calibration and validation of satellite estimates.

PubMed

Holzman, Mauro; Rivas, Raúl; Carmona, Facundo; Niclòs, Raquel

2017-01-01

Optimization of field techniques is crucial to ensure high quality soil moisture data. The aim of the work is to present a sampling method for undisturbed soil and soil water content to calibrated soil moisture probes, in a context of the SMOS (Soil Moisture and Ocean Salinity) mission MIRAS Level 2 soil moisture product validation in Pampean Region of Argentina. The method avoids soil alteration and is recommended to calibrated probes based on soil type under a freely drying process at ambient temperature. A detailed explanation of field and laboratory procedures to obtain reference soil moisture is shown. The calibration results reflected accurate operation for the Delta-T thetaProbe ML2x probes in most of analyzed cases (RMSE and bias ≤ 0.05 m 3 /m 3 ). Post-calibration results indicated that the accuracy improves significantly applying the adjustments of the calibration based on soil types (RMSE ≤ 0.022 m 3 /m 3 , bias ≤ -0.010 m 3 /m 3 ). •A sampling method that provides high quality data of soil water content for calibration of probes is described.•Importance of calibration based on soil types.•A calibration process for similar soil types could be suitable in practical terms, depending on the required accuracy level.

Influence of elk grazing on soil properties in Rocky Mountain National Park

USGS Publications Warehouse

Binkley, Dan; Singer, F.; Kaye, M.; Rochelle, R.

2003-01-01

We used three 35-year exclosures to examine the effects of high elk populations on a variety of soil properties in three vegetation types: upland sagebrush, aspen, and meadow. Grazing and hoof action by elk significantly increased bulk density (from 0.87 kg/l ungrazed to 0.94 kg/l grazed), with greater effects on soils with fewer rocks. Grazing substantially reduced extractable calcium, magnesium, potassium and phosphorus in the sagebrush type, but not in the aspen or meadow types. The only grazing effect on pH came in aspen types, where grazing prevented aspen establishment, and kept soil pH about 0.7 units higher than under aspen inside the exclosures. Grazing had no overall effect on total soil C and N across all exclosures and vegetation types. The availability of soil nitrogen, indexed by in-field resin bags and net mineralization in soil cores, showed little overall effect of grazing. Limited data on soil leaching indicated a possibility of strong increases in nitrate leaching with grazing for an aspen vegetation type at one exclosure. Although we found little effect of grazing on soil N supply, we note that N fertilization doubled the production of grasses and shrubs; if grazing eventually led to changes in soil N supply, species composition and growth would likely change. ?? 2003 Elsevier B.V. All rights reserved.

Trace element analysis of soil type collected from the Manjung and central Perak

DOE Office of Scientific and Technical Information (OSTI.GOV)

Azman, Muhammad Azfar, E-mail: m-azfar@nuclearmalaysia.gov.my; Hamzah, Suhaimi; Rahman, Shamsiah Abdul

2015-04-29

Trace elements in soils primarily originated from their parent materials. Parents’ material is the underlying geological material that has been undergone different types of chemical weathering and leaching processes. Soil trace elements concentrations may be increases as a result of continuous input from various human activities, including power generation, agriculture, mining and manufacturing. This paper describes the Neutron Activation Analysis (NAA) method used for the determination of trace elements concentrations in part per million (ppm) present in the terrestrial environment soil in Perak. The data may indicate any contamination of trace elements contributed from human activities in the area. Themore » enrichment factors were used to check if there any contamination due to the human activities (power plants, agricultural, mining, etc.) otherwise the values would serve as a baseline data for future study. The samples were collected from 27 locations of different soil series in the area at two different depths: the top soil (0-15cm) and the sub soil (15-30cm). The collected soil samples were air dried at 60°C and passed through 2 µm sieve. Instrumental Neutron Activation Analysis (NAA) has been used for the determination of trace elements. Samples were activated in the Nuclear Malaysia TRIGA Mark II reactor followed by gamma spectrometric analysis. By activating the stable elements in the samples, the elements can be determined from the intensities of gamma energies emitted by the respected radionuclides.« less

Influence of site and soil properties on the DRIFT spectra of northern cold-region soils [Influence of site and soil properties on the mid-infrared spectra of northern cold-region soils

DOE PAGES

Matamala, Roser; Calderon, Francisco J.; Jastrow, Julie D.; ...

2017-06-05

Here, we investigated the influence of site characteristics and soil properties on the chemical composition of organic matter in soils collected from a latitudinal transect across Alaska through analysis of diffuse reflectance Fourier transform mid infrared (MidIR) spectra of bulk soils. The study included 119 soil samples collected from 28 sites including tundra, boreal forest, and grassland ecosystems. Organic, mineral, and cryoturbated soil horizons, both seasonally and perennially frozen, from a variety of depths and edaphic conditions were examined. The amount and chemical composition of organic matter as well as site and soil properties exerted a strong influence on themore » MidIR spectra. The spectra were highly sensitive to the extent of organic matter decomposition, enabling the ordination of Oi, Oe and Oa organic horizons. Differences in absorbance intensity for several spectral bands indicated that Oi horizons contained greater abundance of relatively fresh residues, phenolic-OH compounds, aliphatic compounds (waxes, lipids and fats), and carbohydrates. In contrast, Oa horizons had a greater presence of amide groups (possibly from microbial residues), aromatics, C=C bonds, carboxylates and carboxylic acids. Another significant factor differentiating these horizons was the incorporation of clays and silicates into the decomposing organic matter of Oa horizons. Calculated height peak ratios showed a clear trend to greater decomposition among Oi, Oe and Oa. The MidIR spectra were related to many site/soil attributes including land cover type, parent material, and associated factors, such as permafrost presence/absence, soil drainage, horizon depth, bulk density, cation exchange capacity, and pH. Single MidIR spectral bands were identified that might be used in future studies to quickly estimate the organic and inorganic carbon, total nitrogen, and carbon:nitrogen ratios of soils from northern latitudes. Lastly, our results demonstrate that the information contained in MidIR spectra of bulk soil integrates the quantity and chemical composition of soil organic matter with soil forming factors and highlights the potential for using this information to assess the degradation state of organic matter stored in northern cold-region soils.« less

Influence of site and soil properties on the DRIFT spectra of northern cold-region soils [Influence of site and soil properties on the mid-infrared spectra of northern cold-region soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matamala, Roser; Calderon, Francisco J.; Jastrow, Julie D.

Here, we investigated the influence of site characteristics and soil properties on the chemical composition of organic matter in soils collected from a latitudinal transect across Alaska through analysis of diffuse reflectance Fourier transform mid infrared (MidIR) spectra of bulk soils. The study included 119 soil samples collected from 28 sites including tundra, boreal forest, and grassland ecosystems. Organic, mineral, and cryoturbated soil horizons, both seasonally and perennially frozen, from a variety of depths and edaphic conditions were examined. The amount and chemical composition of organic matter as well as site and soil properties exerted a strong influence on themore » MidIR spectra. The spectra were highly sensitive to the extent of organic matter decomposition, enabling the ordination of Oi, Oe and Oa organic horizons. Differences in absorbance intensity for several spectral bands indicated that Oi horizons contained greater abundance of relatively fresh residues, phenolic-OH compounds, aliphatic compounds (waxes, lipids and fats), and carbohydrates. In contrast, Oa horizons had a greater presence of amide groups (possibly from microbial residues), aromatics, C=C bonds, carboxylates and carboxylic acids. Another significant factor differentiating these horizons was the incorporation of clays and silicates into the decomposing organic matter of Oa horizons. Calculated height peak ratios showed a clear trend to greater decomposition among Oi, Oe and Oa. The MidIR spectra were related to many site/soil attributes including land cover type, parent material, and associated factors, such as permafrost presence/absence, soil drainage, horizon depth, bulk density, cation exchange capacity, and pH. Single MidIR spectral bands were identified that might be used in future studies to quickly estimate the organic and inorganic carbon, total nitrogen, and carbon:nitrogen ratios of soils from northern latitudes. Lastly, our results demonstrate that the information contained in MidIR spectra of bulk soil integrates the quantity and chemical composition of soil organic matter with soil forming factors and highlights the potential for using this information to assess the degradation state of organic matter stored in northern cold-region soils.« less

Tree Regeneration Under Different Land-Use Mosaics in the Brazilian Amazon's "Arc of Deforestation".

PubMed

Do Vale, Igor; Miranda, Izildinha Souza; Mitja, Danielle; Grimaldi, Michel; Nelson, Bruce Walker; Desjardins, Thierry; Costa, Luiz Gonzaga Silva

2015-08-01

We studied the tree-regeneration patterns in three distinct agricultural settlements in the Eastern Amazon to test the influence of land-use mosaics. The following questions are addressed: are the floristic structure and composition of regenerating trees affected by the various land-use types applied in the agricultural settlements? Do tree-regeneration patterns respond similarly to distinct land-use mosaics? Is there a relationship between tree regeneration and soil characteristics among the land-use types? The regeneration was inventoried at 45 sampling points in each settlement. At each sampling point, fourteen soil variables were analyzed. Nine different land-use types were considered. The floristic structure and composition of the settlements showed differences in the density of individuals and species and high species heterogeneity among the land-use types. The maximum Jaccard similarity coefficient found between land-use types was only 29%. Shade-tolerant species were the most diverse functional group in most land-use types, including pasture and annual crops, ranging from 91% of the number of species in the conserved and exploited forests of Travessão 338-S to 53% in the invaded pastures of Maçaranduba. The land-use types influenced significantly the floristic structure and composition of regenerating trees in two agricultural settlements, but not in third the settlement, which had greater forest cover. This finding demonstrates that the composition of each land-use mosaic, established by different management approaches, affects regeneration patterns. Tree regeneration was related to soil characteristics in all mosaics. Preparation of the area by burning was most likely the determining factor in the differences in soil characteristics between forests and agricultural areas.

Differential controls on soil carbon density and mineralization among contrasting forest types in a temperate forest ecosystem.

PubMed

You, Ye-Ming; Wang, Juan; Sun, Xiao-Lu; Tang, Zuo-Xin; Zhou, Zhi-Yong; Sun, Osbert Jianxin

2016-03-01

Understanding the controls on soil carbon dynamics is crucial for modeling responses of ecosystem carbon balance to global change, yet few studies provide explicit knowledge on the direct and indirect effects of forest stands on soil carbon via microbial processes. We investigated tree species, soil, and site factors in relation to soil carbon density and mineralization in a temperate forest of central China. We found that soil microbial biomass and community structure, extracellular enzyme activities, and most of the site factors studied varied significantly across contrasting forest types, and that the associations between activities of soil extracellular enzymes and microbial community structure appeared to be weak and inconsistent across forest types, implicating complex mechanisms in the microbial regulation of soil carbon metabolism in relation to tree species. Overall, variations in soil carbon density and mineralization are predominantly accounted for by shared effects of tree species, soil, microclimate, and microbial traits rather than the individual effects of the four categories of factors. Our findings point to differential controls on soil carbon density and mineralization among contrasting forest types and highlight the challenge to incorporate microbial processes for constraining soil carbon dynamics in global carbon cycle models.

Differential controls on soil carbon density and mineralization among contrasting forest types in a temperate forest ecosystem

PubMed Central

You, Ye-Ming; Wang, Juan; Sun, Xiao-Lu; Tang, Zuo-Xin; Zhou, Zhi-Yong; Sun, Osbert Jianxin

2016-01-01

Understanding the controls on soil carbon dynamics is crucial for modeling responses of ecosystem carbon balance to global change, yet few studies provide explicit knowledge on the direct and indirect effects of forest stands on soil carbon via microbial processes. We investigated tree species, soil, and site factors in relation to soil carbon density and mineralization in a temperate forest of central China. We found that soil microbial biomass and community structure, extracellular enzyme activities, and most of the site factors studied varied significantly across contrasting forest types, and that the associations between activities of soil extracellular enzymes and microbial community structure appeared to be weak and inconsistent across forest types, implicating complex mechanisms in the microbial regulation of soil carbon metabolism in relation to tree species. Overall, variations in soil carbon density and mineralization are predominantly accounted for by shared effects of tree species, soil, microclimate, and microbial traits rather than the individual effects of the four categories of factors. Our findings point to differential controls on soil carbon density and mineralization among contrasting forest types and highlight the challenge to incorporate microbial processes for constraining soil carbon dynamics in global carbon cycle models. PMID:26925871

Global data bases on distribution, characteristics and methane emission of natural wetlands: Documentation of archived data tape

NASA Technical Reports Server (NTRS)

Matthews, Elaine

1989-01-01

Global digital data bases on the distribution and environmental characteristics of natural wetlands, compiled by Matthews and Fung (1987), were archived for public use. These data bases were developed to evaluate the role of wetlands in the annual emission of methane from terrestrial sources. Five global 1 deg latitude by 1 deg longitude arrays are included on the archived tape. The arrays are: (1) wetland data source, (2) wetland type, (3) fractional inundation, (4) vegetation type, and (5) soil type. The first three data bases on wetland locations were published by Matthews and Fung (1987). The last two arrays contain ancillary information about these wetland locations: vegetation type is from the data of Matthews (1983) and soil type from the data of Zobler (1986). Users should consult original publications for complete discussion of the data bases. This short paper is designed only to document the tape, and briefly explain the data sets and their initial application to estimating the annual emission of methane from natural wetlands. Included is information about array characteristics such as dimensions, read formats, record lengths, blocksizes and value ranges, and descriptions and translation tables for the individual data bases.

Effects of soil depth and plant-soil interaction on microbial community in temperate grasslands of northern China.

PubMed

Yao, Xiaodong; Zhang, Naili; Zeng, Hui; Wang, Wei

2018-07-15

Although the patterns and drivers of soil microbial community composition are well studied, little is known about the effects of plant-soil interactions and soil depth on soil microbial distribution at a regional scale. We examined 195 soil samples from 13 sites along a climatic transect in the temperate grasslands of northern China to measure the composition of and factors influencing soil microbial communities within a 1-m soil profile. Soil microbial community composition was measured using phospholipid fatty acids (PLFA) analysis. Fungi predominated in topsoil (0-10 cm) and bacteria and actinomycetes in deep soils (40-100 cm), independent of steppe types. This variation was explained by contemporary environmental factors (including above- and below-ground plant biomass, soil physicochemical and climatic factors) >58% in the 0-40 cm of soil depth, but <45% in deep soils. Interestingly, when we considered the interactive effects between plant traits (above ground biomass and root biomass) and soil factors (pH, clay content, and soil total carbon, nitrogen, phosphorous), we observed a significant interaction effect occurring at depths of 10-20 cm soil layer, due to different internal and external factors of the plant-soil system along the soil profile. These results improve understanding of the drivers of soil microbial community composition at regional scales. Copyright © 2018 Elsevier B.V. All rights reserved.

Viewing the Earth with Closed Eyes.

ERIC Educational Resources Information Center

Kaschner, Susan K.

1978-01-01

Describes earth science activities for the visually impaired student. Includes soil type identification, stream table erosion, and relief map activities. Recommends a multisensory approach to the teaching of earth science and hands-on activities. (MA)

Prediction and inter-dependence of stock and change of soil quality, function and diversity at a national scale and implications for ecosystem services

NASA Astrophysics Data System (ADS)

Reynolds, B.; Emmett, B.; Spurgeon, D.; Rowe, E. C.; Mills, R.; Griffiths, R.; Jones, D.; Simfukwe, P.

2011-12-01

A soils monitoring programme which uses an ecosystem approach has been in place in Great Britain for 30 years.The findings from the latest survey in 2007 has been interpreted within a natural capital and ecosystem services context to assess the outcome of a range of policies to protect the natural environment and increase sustainability. Issues of interest included the impacts of declines in atmospheric deposition of acidity, nitrogen and metals, the benefits of agri-environment schemes and climate change on carbon storage in soils and soil biodiversity, and reduced fertiliser applications on eutrophication of soils and waters. Topsoil samples (0-15cm) were taken within 600 1km squares across the country stratified to cover all major habitat types. At the same time botanical surveys in permanent vegetation plots were recorded together with change in land use and management and stream and pond water quality and ecology. These data are used together with satellite images, digital cartography, and ancillary datasets to assess change in landcover for all of GB and upscaling of change data from the samples squares. Changes in topsoil were assessed in 1978, 1998 and again in 2007. An increase in pH but no change in soil carbon was observed between 1978 and 2007. Additional measures added in 1998 enabled a decline in Olsen-P,increase in C:N, decline in soil mesofauna diversity and decline in many metal concentrations to be identified over the last 10 years. In 2007, futher measurements were added to include carbon substrate utilisation, nitrogen mineralisation and bacterial diversity (fungi is in progress)enabling national maps to be created for the first time for these important soil parameters. Multi-variate statistics were used to explore the relationship between the different soil measures, the predictive capability of soil and vegetation type, and drivers of change to be identified. In addition, assigning measurements to specific functions which underpinned individual supporting and regulation services provided a method for assessing direction of change of a range of ecosystem services at national scale for the first time.

Managing ecotourism visitation in protected areas

USGS Publications Warehouse

Marion, J.L.; Farrell, T.A.; Lindberg, Kreg; Wood, Megan Epler; Engeldrum, David

1998-01-01

Ecotourism management seeks to integrate and balance several potentially conflicting objectives: protection of natural and cultural resources, provision of recreation opportunities and generation of economic benefits. In the absence of effective planning and management, ecotourism can lead to significant negative impacts on vegetation, soil, water, wildlife, historic resources, cultures, and visitor experiences. This chapter reviews visitor-related natural resource and experience impacts associated with ecotourism within protected areas. The influence of factors that control the nature and extent of impacts are also reviewed, including type and amount of use, the variable resistance and resilience of environmental attributes such as vegetation and soil types, and the role of management in shaping visitation, resources and facilities to support visitation while minimizing associated impacts. Implications for managing the effects of protected area visitation are highlighted, including carrying capacity decision frameworks and selecting management strategies and tactics.

Parental material and cultivation determine soil bacterial community structure and fertility.

PubMed

Sun, Li; Gao, Jusheng; Huang, Ting; Kendall, Joshua R A; Shen, Qirong; Zhang, Ruifu

2015-01-01

Microbes are the key components of the soil environment, playing important roles during soil development. Soil parent material provides the foundation elements that comprise the basic nutritional environment for the development of microbial community. After 30 years artificial maturation of cultivation, the soil developments of three different parental materials were evaluated and bacterial community compositions were investigated using the high-throughput sequencing approach. Thirty years of cultivation increased the soil fertility and soil microbial biomass, richness and diversity, greatly changed the soil bacterial communities, the proportion of phylum Actinobacteria decreased significantly, while the relative abundances of the phyla Acidobacteria, Chloroflexi, Gemmatimonadetes, Armatimonadetes and Nitrospira were significantly increased. Soil bacterial communities of parental materials were separated with the cultivated ones, and comparisons of different soil types, granite soil and quaternary red clay soil were similar and different with purple sandy shale soil in both parental materials and cultivated treatments. Bacterial community variations in the three soil types were affected by different factors, and their alteration patterns in the soil development also varied with soil type. Soil properties (except total potassium) had a significant effect on the soil bacterial communities in all three soil types and a close relationship with abundant bacterial phyla. The amounts of nitrogen-fixing bacteria as well as the abundances of the nifH gene in all cultivated soils were higher than those in the parental materials; Burkholderia and Rhizobacte were enriched significantly with long-term cultivation. The results suggested that crop system would not deplete the nutrients of soil parental materials in early stage of soil maturation, instead it increased soil fertility and changed bacterial community, specially enriched the nitrogen-fixing bacteria to accumulate nitrogen during soil development. © FEMS 2014. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Distinct Circular Single-Stranded DNA Viruses Exist in Different Soil Types

PubMed Central

Swanson, Maud M.; Dawson, Lorna; Freitag, Thomas E.; Singh, Brajesh K.; Torrance, Lesley; Mushegian, Arcady R.

2015-01-01

The potential dependence of virus populations on soil types was examined by electron microscopy, and the total abundance of virus particles in four soil types was similar to that previously observed in soil samples. The four soil types examined differed in the relative abundances of four morphological groups of viruses. Machair, a unique type of coastal soil in western Scotland and Ireland, differed from the others tested in having a higher proportion of tailed bacteriophages. The other soils examined contained predominantly spherical and thin filamentous virus particles, but the Machair soil had a more even distribution of the virus types. As the first step in looking at differences in populations in detail, virus sequences from Machair and brown earth (agricultural pasture) soils were examined by metagenomic sequencing after enriching for circular Rep-encoding single-stranded DNA (ssDNA) (CRESS-DNA) virus genomes. Sequences from the family Microviridae (icosahedral viruses mainly infecting bacteria) of CRESS-DNA viruses were predominant in both soils. Phylogenetic analysis of Microviridae major coat protein sequences from the Machair viruses showed that they spanned most of the diversity of the subfamily Gokushovirinae, whose members mainly infect obligate intracellular parasites. The brown earth soil had a higher proportion of sequences that matched the morphologically similar family Circoviridae in BLAST searches. However, analysis of putative replicase proteins that were similar to those of viruses in the Circoviridae showed that they are a novel clade of Circoviridae-related CRESS-DNA viruses distinct from known Circoviridae genera. Different soils have substantially different taxonomic biodiversities even within ssDNA viruses, which may be driven by physicochemical factors. PMID:25841004

The interdisciplinary nature of SOIL

NASA Astrophysics Data System (ADS)

Brevik, E. C.; Cerdà, A.; Mataix-Solera, J.; Pereg, L.; Quinton, J. N.; Six, J.; Van Oost, K.

2015-01-01

The holistic study of soils requires an interdisciplinary approach involving biologists, chemists, geologists, and physicists, amongst others, something that has been true from the earliest days of the field. In more recent years this list has grown to include anthropologists, economists, engineers, medical professionals, military professionals, sociologists, and even artists. This approach has been strengthened and reinforced as current research continues to use experts trained in both soil science and related fields and by the wide array of issues impacting the world that require an in-depth understanding of soils. Of fundamental importance amongst these issues are biodiversity, biofuels/energy security, climate change, ecosystem services, food security, human health, land degradation, and water security, each representing a critical challenge for research. In order to establish a benchmark for the type of research that we seek to publish in each issue of SOIL, we have outlined the interdisciplinary nature of soil science research we are looking for. This includes a focus on the myriad ways soil science can be used to expand investigation into a more holistic and therefore richer approach to soil research. In addition, a selection of invited review papers are published in this first issue of SOIL that address the study of soils and the ways in which soil investigations are essential to other related fields. We hope that both this editorial and the papers in the first issue will serve as examples of the kinds of topics we would like to see published in SOIL and will stimulate excitement among our readers and authors to participate in this new venture.

Effect of soil type and moisture availability on the foraging behavior of the Formosan subterranean termite (Isoptera: Rhinotermitidae).

PubMed

Cornelius, Mary L; Osbrink, Weste L A

2010-06-01

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and shelter tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termites built shelter tubes on the sides of the containers. In containers with sand, termites built shelter tubes directly into the air and covered the sides of the container with a layer of sand. The interaction of soil type and moisture availability affected termite movement, feeding, and survival. In assays with moist soils, termites were more likely to aggregate in top soil over potting soil and peat moss. However, termites were more likely to move into containers with dry peat moss and potting soil than containers with dry sand and clay. Termites were also significantly more likely to move into containers with dry potting soil than dry top soil. In the assay with dry soils, termite mortality was high even though termites were able to travel freely between moist sand and dry soil, possibly due to desiccation caused by contact with dry soil. Evaporation from potting soil and peat moss resulted in significant mortality, whereas termites were able to retain enough moisture in top soil, sand, and clay to survive for 25 d. The interaction of soil type and moisture availability influences the distribution of foraging termites in microhabitats.

Effects of Vegetation Type on Soil Carbon Dynamics Along the Kaidu River in the Yanqi Basin of Northwestern China

NASA Astrophysics Data System (ADS)

Wang, J.; Wang, X.; Wang, W.

2010-12-01

The Kaidu River originates from the central southern slopes of the Tian Shan from where it flows through the Yulduz Basin and the Yanqi Basin into Lake Bosten. There has been intensive agricultural development along the Kaidu River in the Yanqi Basin. Corn and pepper are two of the main crops. Here, we present a study includes comparisons of soil organic carbon (SOC) between typical native vegtation types (e.g., Glycyrhiza uralensis Fisch, Achnatherum splendens and Sophora alopecuroides Linn) and agricultural crops (i.e., corn and pepper). Fourteen soil pits were sampled at five depths (0-5, 5-15, 15-30, 30-50 and 50-100 cm) in August 2010 (Figure 1). Soil organic matter are determined using the traditional Walkley and Black method and Loss-on-ignition at 375°C for 17 hours. As expected, agricultural soils contain higher SOC than non-agriculatural lands. Native vegetation has various effects on vertical distribution of SOC. We discuss how root system influences SOC dynamics along the Kaidu River in the central Xinjiang, China. Fig. 1. Map of sampling sites along the Kaidu River in northwestern China.

Distribution and decline of human pathogenic bacteria in soil after application in irrigation water and the potential for soil-splash-mediated dispersal onto fresh produce.

PubMed

Monaghan, J M; Hutchison, M L

2012-05-01

To improve our understanding of the survival and splash-mediated transfer of zoonotic agents and faecal indicator bacteria introduced into soils used for crop cultivation via contaminated irrigation waters. Zoonotic agents and an Escherichia coli marker bacterium were inoculated into borehole water, which was applied to two different soil types in early-, mid- and late summer. Decline of the zoonotic agents was influenced by soil type. Marker bacteria applied to columns of two soil types in irrigation water did not concentrate at the surface of the soils. Decline of zoonotic agents at the surface was influenced by soil type and environmental conditions. Typically, declines were rapid and bacteria were not detectable after 5 weeks. Selective agar strips were used to determine that the impact of water drops 24-87 μl could splash marker bacteria from soil surfaces horizontal distances of at least 25 cm and heights of 20 cm. Soil splash created by rain-sized water droplets can transfer enteric bacteria from soil to ready-to-eat crops. Persistence of zoonotic agents was reduced at the hottest part of the growing season when irrigation is most likely. Soil splash can cause crop contamination. We report the penetration depths and seasonally influenced declines of bacteria applied in irrigation water into two soil types. © 2012 The Authors. Journal of Applied Microbiology © 2012 The Society for Applied Microbiology.

Soil physical and hydrological properties as affected by long-term addition of various organic amendments

NASA Astrophysics Data System (ADS)

Eden, Marie; Völkel, Jörg; Mercier, Vincent; Labat, Christophe; Houot, Sabine

2014-05-01

The use of organic residues as soil amendments in agriculture not only reduces the amount of waste needing to be disposed of; it may also lead to improvements in soil properties, including physical and hydrological ones. The present study examines a long-term experiment called "Qualiagro", run jointly by INRA and Veolia Environment in Feucherolles, France (near Paris). It was initiated in 1998 on a loess-derived silt loam (787 g/kg silt, 152 g/kg clay) and includes ten treatments: four types of organic amendments and a control (CNT) each at two levels of mineral nitrogen (N) addition: minimal (Nmin) and optimal (Nopt). The amendments include three types of compost and farmyard manure (FYM), which were applied every other year at a rate of ca. 4 t carbon ha-1. The composts include municipal solid waste compost (MSW), co-compost of green wastes and sewage sludge (GWS), and biowaste compost (BIO). The plots are arranged in a randomized block design and have a size of 450 m²; each treatment is replicated four times (total of 40 plots). Ca. 15 years after the start of the experiment soil organic carbon (OC) had continuously increased in the amended plots, while it remained stable or decreased in the control plots. This compost- or manure-induced increase in OC plays a key role, affecting numerous dependant soil properties like bulk density, porosity and water retention. The water holding capacity (WHC) of a soil is of particular interest to farmers in terms of water supply for plants, but also indicates soil quality and functionality. Addition of OC may affect WHC in different ways: carbon-induced aggregation may increase larger-pore volume and hence WHC at the wet end while increased surface areas may lead to an increased retention of water at the dry end. Consequently it is difficult to predict (e.g. with pedotransfer functions) the impact on the amount of water available for plants (PAW), which was experimentally determined for the soils, along with the entire range of the water retention curve. The impact of organic amendments on water retained at field capacity (FC) and wilting point (WP) as well as the retention curve in general differed compared to CNT but also depends on the definition of FC (the associated matric potential). Overall, within the first 15 years of the experiment, the organic treatments affected and generally improved various soil properties relevant in terms of quality, functionality and productivity. Acknowledgment: This work was granted by ADEME within the Pro-Extern project.

Assessing soil biodiversity potentials in Europe.

PubMed

Aksoy, Ece; Louwagie, Geertrui; Gardi, Ciro; Gregor, Mirko; Schröder, Christoph; Löhnertz, Manuel

2017-07-01

Soil is important as a critical component for the functioning of terrestrial ecosystems. The largest part of the terrestrial biodiversity relies, directly or indirectly, on soil. Furthermore, soil itself is habitat to a great diversity of organisms. The suitability of soil to host such a diversity is strongly related to its physico-chemical features and environmental properties. However, due to the complexity of both soil and biodiversity, it is difficult to identify a clear and unambiguous relationship between environmental parameters and soil biota. Nevertheless, the increasing diffusion of a more integrated view of ecosystems, and in particular the development of the concept of ecosystem services, highlights the need for a better comprehension of the role played by soils in offering these services, including the habitat provision. An assessment of the capability of soils to host biodiversity would contribute to evaluate the quality of soils in order to help policy makers with the development of appropriate and sustainable management actions. However, so far, the heterogeneity of soils has been a barrier to the production of a large-scale framework that directly links soil features to organisms living within it. The current knowledge on the effects of soil physico-chemical properties on biota and the available data at continental scale open the way towards such an evaluation. In this study, the soil habitat potential for biodiversity was assessed and mapped for the first time throughout Europe by combining several soil features (pH, soil texture and soil organic matter) with environmental parameters (potential evapotranspiration, average temperature, soil biomass productivity and land use type). Considering the increasingly recognized importance of soils and their biodiversity in providing ecosystem services, the proposed approach appears to be a promising tool that may contribute to open a forum on the need to include soils in future environmental policy making decisions. Copyright © 2017 Elsevier B.V. All rights reserved.

An Equivalent cross-section Framework for improving computational efficiency in Distributed Hydrologic Modelling

NASA Astrophysics Data System (ADS)

Khan, Urooj; Tuteja, Narendra; Ajami, Hoori; Sharma, Ashish

2014-05-01

While the potential uses and benefits of distributed catchment simulation models is undeniable, their practical usage is often hindered by the computational resources they demand. To reduce the computational time/effort in distributed hydrological modelling, a new approach of modelling over an equivalent cross-section is investigated where topographical and physiographic properties of first-order sub-basins are aggregated to constitute modelling elements. To formulate an equivalent cross-section, a homogenization test is conducted to assess the loss in accuracy when averaging topographic and physiographic variables, i.e. length, slope, soil depth and soil type. The homogenization test indicates that the accuracy lost in weighting the soil type is greatest, therefore it needs to be weighted in a systematic manner to formulate equivalent cross-sections. If the soil type remains the same within the sub-basin, a single equivalent cross-section is formulated for the entire sub-basin. If the soil type follows a specific pattern, i.e. different soil types near the centre of the river, middle of hillslope and ridge line, three equivalent cross-sections (left bank, right bank and head water) are required. If the soil types are complex and do not follow any specific pattern, multiple equivalent cross-sections are required based on the number of soil types. The equivalent cross-sections are formulated for a series of first order sub-basins by implementing different weighting methods of topographic and physiographic variables of landforms within the entire or part of a hillslope. The formulated equivalent cross-sections are then simulated using a 2-dimensional, Richards' equation based distributed hydrological model. The simulated fluxes are multiplied by the weighted area of each equivalent cross-section to calculate the total fluxes from the sub-basins. The simulated fluxes include horizontal flow, transpiration, soil evaporation, deep drainage and soil moisture. To assess the accuracy of equivalent cross-section approach, the sub-basins are also divided into equally spaced multiple hillslope cross-sections. These cross-sections are simulated in a fully distributed settings using the 2-dimensional, Richards' equation based distributed hydrological model. The simulated fluxes are multiplied by the contributing area of each cross-section to get total fluxes from each sub-basin referred as reference fluxes. The equivalent cross-section approach is investigated for seven first order sub-basins of the McLaughlin catchment of the Snowy River, NSW, Australia, and evaluated in Wagga-Wagga experimental catchment. Our results show that the simulated fluxes using an equivalent cross-section approach are very close to the reference fluxes whereas computational time is reduced of the order of ~4 to ~22 times in comparison to the fully distributed settings. The transpiration and soil evaporation are the dominant fluxes and constitute ~85% of actual rainfall. Overall, the accuracy achieved in dominant fluxes is higher than the other fluxes. The simulated soil moistures from equivalent cross-section approach are compared with the in-situ soil moisture observations in the Wagga-Wagga experimental catchment in NSW, and results found to be consistent. Our results illustrate that the equivalent cross-section approach reduces the computational time significantly while maintaining the same order of accuracy in predicting the hydrological fluxes. As a result, this approach provides a great potential for implementation of distributed hydrological models at regional scales.

Thermal volatilization (TV) of different hyperarid Mars like-soils from the Atacama Desert: Implications for the analysis of the Phoenix Mission

NASA Astrophysics Data System (ADS)

Valdivia-Silva, J. E.; Navarro-Gonzalez, R.; McKay, C. P.

2008-09-01

The Phoenix spacecraft will search for organics in the soil and ice in the Martian north polar regions using thermal volatilization (TV) followed by mass spectrometry (MS). This experiment is a combination of a high-temperature furnace and a mass spectrometer that will be use to analyze samples delivered to instrument via a robotic arm. The samples will be heated from ambient to 1000ºC while evolved gases, including organic molecules and fragments, if they are present, will be simultaneously measured by a magnetic sector mass spectrometer (1). Our laboratory has developed a sample characterization method using a pyrolizer integrated to a quadrupole mass spectrometer to support the interpretations of TV data. The Atacama Desert, on northern Chile and southern Peru, has been considered the most arid region over the world (2) and an excellent Mars-like soil analogous (3). These soils contain very low levels to organic matter (10-40 ppm of organic C), and exotic mineralogical composition including iron oxides, which are common characteristics expected on Mars. A previous paper that examined the release of organics from samples soils by flash TV (pyrolisis) coupled to GC-MS (4). This work showed low efficiency of flash TV in soils with low organics or high contents of iron minerals. In addition, other study of agricultural soils showed low correlation between organics concentration and TV response, when levels of total organic matter were below 50000 ppm C or high presence of iron oxides (5). However, the efficiency of gradual heating by TV analysis from hyperarid soils has not been investigated. Here we examine the thermal and evolved gas properties of six types of soils from the two hyperarid core regions from the Atacama Desert: Yungay (northern Chile) and Pampas de La Joya (southern Peru), in order to investigate the effect of soil matrix and low organics contents over TV response. Between 20 to 40 mg of soil was loaded in a capillary quartz tube and it was mounted in the center of platinum coil filament pyrolizer probe. Then sample into de quartz tube was subjected to a thermal treatment from 30°C to 1200°C with a heating rate of 20°C/min. The resulting volatiles evolved from the sample were carried away by helium and transferred into a HP quadrupole mass spectrometer operating in electron ionization mode at 70 eV with a resolution of 1m/z. The mass analyzer was scanned from 10 to 200 m/z at a rate 5.3 scans per second. The nominal sensitivity of the mass analyzer is 0.02 ppb of hexachlorobenzene. Blanks were prepared with no soil added. As expected, there were significant differences in the evolved gas behaviors between soils samples depending of the soil matrix under similar heating conditions. First, the samples belonging to the most arid environments (PE001, PE389) had significant differences compared with less arid soils (PE378, PE386). Carbon in hyperarid soils, in the form of CO2 (ion 44 m/z) began its release to 330±30°C, while the less arid soils to 245±45°C. Volatile ions released from soils during TV-MS analysis were analyzed searching organics fragments. Soil type VI (PE-001), which contains ~11.4 ppm organic C, showed the release of the following mass fragments: 18, 44, 48, 64, and 66. Sources for the release of CO2 in TV analysis of soils comes to oxidation of organic matter (<600ºC), and thermal decomposition of carbonates (>600ºC). Mass 18 originates from water releasing in the course of dehydration processes that is bound in soil minerals, and from oxidation of organics in different temperatures depending the mineral fraction in the soil. The masses 48, 64, and 66 have similar thermal properties, beginning to be released at ~370°C and continue to rise up to 1200°C. These masses are due to the decomposition of sulfates into SO+, SO2 +, and S34O2 +. Mass 66 is detected only if the abundance of mass 64 is very high. TV traces from soils type V (PE-276), type I (PE-361), and type II (PE-388), which contain low organics concentrations (3-23 ppm of organic C), presented similar ions released to soil type VI, but with some variations at times of peak start or maximum release. The TV-MS trace for soil type IV (PE-287) showed the release of the following ions: 16, 18, 36, 44, 48, and 64. In this soil, the mass 44 showed the highest value at >760°C, probably by thermal decomposition of carbonates at higher temperatures; however at 700ºC, CO2 could result from the decomposition oxidation of refractory organics that have been detected by pyrolisis-GC-MS at 750ºC (4). In contrast, the TV-MS trace for sample soil type III (PE-386), which contains 35 ppm of organic C, showed the release of the following major mass fragments (m/z): 18, 30, 36, 44, 48 and 64 (Figure 1). EPSC Abstracts, Vol. 3, EPSC2008-A-00490, 2008 European Planetary Science Congress, Author(s) 2008 Probably, the mass 30 is due to NO that evolves from the thermal oxidation of N-organics at low temperature or degradation of nitrates at high temperatures. Additionally, ion 36 could be due to thermal degradation to chlorides. Our results show interesting ions released from Marslike soils by TV analysis, however soils that have low levels to organic carbon (3-40 ppm), were not detected by this method. If the concentrations of organics in the soils and ice on Mars at the Phoenix landing site are low than 30 ppm, the experiment could fail. Recently, our laboratory investigated the presence of organics in the samples soils by the release of NO (mass 30) at low temperatures using TV-MS (Research submitted). Hence, Phoenix mission could have an option in the searching for organic matter on Mars. These data indicate the importance of the study of Mars-like soils to prevent similar problems in space research.

Development and Validation of EPH Material Model for Engineered Roadway Soil

DTIC Science & Technology

2014-08-01

MODEL FOR ENGINEERED ROADWAY SOIL Ching Hsieh, PhD Altair Engineering Troy, MI Jianping Sheng, Ph.D. Jai Ramalingam System Engineering...0188 Public reporting burden for the collection of information is estimated to average 1 hour per response, including the time for reviewing...of information if it does not display a currently valid OMB control number. 1 . REPORT DATE 11 AUG 2014 2. REPORT TYPE Journal Article 3. DATES

Soil chemistry and pollution study of a closed landfill site at Ampar Tenang, Selangor, Malaysia.

PubMed

Mohd Adnan, Siti Nur Syahirah Binti; Yusoff, Sumiani; Piaw, Chua Yan

2013-06-01

A total of 20 landfills are located in State of Selangor, Malaysia. This includes the Ampar Tenang landfill site, which was closed on 26 January 2010. It was reported that the landfill has been upgraded to a level I type of sanitary classification. However, the dumpsite area is not being covered according to the classification. In addition, municipal solid waste was dumped directly on top of the unlined natural alluvium formation. This does not only contaminate surface and subsurface soils, but also initiates the potential risk of groundwater pollution. Based on previous studies, the Ampar Tenang soil has been proven to no longer be capable of preventing pollution migration. In this study, metal concentrations of soil samples up to 30 m depth were analyzed based on statistical analysis. It is very significant because research of this type has not been carried out before. The subsurface soils were significantly polluted by arsenic (As), lead (Pb), iron (Fe), copper (Cu) and aluminium (Al). As and Pb exceeded the safe limit values of 5.90 mg/kg and 31.00 mg/kg, respectively, based on Provincial Sediment Quality Guidelines for Metals and the Interim Sediment Quality Values. Furthermore, only Cu concentrations showed a significantly decreasing trend with increasing depth. Most metals were found on clay-type soils based on the cluster analysis method. Moreover, the analysis also differentiates two clusters: cluster I-Pb, As, zinc, Cu, manganese, calcium, sodium, magnesium, potassium and Fe; cluster II-Al. Different clustering may suggest a different contamination source of metals.

Ecotoxicity of boric acid in standard laboratory tests with plants and soil organisms.

PubMed

Princz, Juliska; Becker, Leonie; Scheffczyk, Adam; Stephenson, Gladys; Scroggins, Rick; Moser, Thomas; Römbke, Jörg

2017-05-01

To verify the continuous sensitivity of ecotoxicological tests (mainly the test organisms), reference substances with known toxicity are regularly tested. Ideally, this substance(s) would lack specificity in its mode action, be bioavailable and readily attainable with cost-effective means of chemical characterization. Boric acid has satisfied these criteria, but has most recently been characterized as a substance of very high concern, due to reproductive effects in humans, thus limiting its recommendation as an ideal reference toxicant. However, there is probably no other chemical for which ecotoxicity in soil has been so intensively studied; an extensive literature review yielded lethal (including avoidance) and sublethal data for 38 taxa. The ecotoxicity data were evaluated using species sensitivity distributions, collectively across all taxa, and separately according to species type, endpoints, soil type and duration. The lack of specificity in the mode of action yielded broad toxicity among soil taxa and soil types, and provided a collective approach to assessing species sensitivity, while taking into consideration differences in test methodologies and exposure durations. Toxicity was species-specific with Folsomia candida and enchytraied species demonstrating the most sensitivity; among plants, the following trend occurred: dicotyledonous (more sensitive) ≫ monocotyledonous ≫ gymnosperm species. Sensitivity was also time and endpoint specific, with endpoints such as lethality and avoidance being less sensitive than reproduction effects. Furthermore, given the breadth of data and toxicity demonstrated by boric acid, lessons learned from its evaluation are discussed to recommend the properties required by an ideal reference substance for the soil compartment.

Thermal signature characteristics of vehicle/terrain interaction disturbances: implications for battlefield vehicle classification.

PubMed

Eastes, John W; Mason, George L; Kusinger, Alan E

2004-05-01

Thermal emissivity spectra (8-14 microm) of track impressions/background were determined in conjunction with operation of six military vehicle types, T-72 and M1 Tanks, an M2 Bradley Fighting Vehicle, a 5-ton truck, a D7 tractor, and a High Mobility Multipurpose Wheeled Vehicle (HMMWV), over diverse soil surfaces to determine if vehicle type could be related to track thermal signatures. Results suggest soil compaction and fragmentation/pulverization are primary parameters affecting track signatures and that soil and vehicle/terrain-contact type determine which parameter dominates. Steel-tracked vehicles exert relatively low ground-contact pressure but tend to fragment/pulverize soil more so than do rubber-tired vehicles, which tend mainly to compact. In quartz-rich, lean clay soil tracked vehicles produced impressions with spectral contrast of the quartz reststrahlen features decreased from that of the background. At the same time, 5-ton truck tracks exhibited increased contrast on the same surface, suggesting that steel tracks fragmented soil while rubber tires mainly produced compaction. The structure of materials such as sand and moist clay-rich river sediment makes them less subject to further fragmentation/pulverization; thus, compaction was the main factor affecting signatures in these media, and both tracked and wheeled vehicles created impressions with increased spectral contrast on these surfaces. These results suggest that remotely sensed thermal signatures could differentiate tracked and wheeled vehicles on terrain in many areas of the world of strategic interest. Significant applications include distinguishing visually/spectrally identical lightweight decoys from actual threat vehicles.

[Development of an analyzing system for soil parameters based on NIR spectroscopy].

PubMed

Zheng, Li-Hua; Li, Min-Zan; Sun, Hong

2009-10-01

A rapid estimation system for soil parameters based on spectral analysis was developed by using object-oriented (OO) technology. A class of SOIL was designed. The instance of the SOIL class is the object of the soil samples with the particular type, specific physical properties and spectral characteristics. Through extracting the effective information from the modeling spectral data of soil object, a map model was established between the soil parameters and its spectral data, while it was possible to save the mapping model parameters in the database of the model. When forecasting the content of any soil parameter, the corresponding prediction model of this parameter can be selected with the same soil type and the similar soil physical properties of objects. And after the object of target soil samples was carried into the prediction model and processed by the system, the accurate forecasting content of the target soil samples could be obtained. The system includes modules such as file operations, spectra pretreatment, sample analysis, calibrating and validating, and samples content forecasting. The system was designed to run out of equipment. The parameters and spectral data files (*.xls) of the known soil samples can be input into the system. Due to various data pretreatment being selected according to the concrete conditions, the results of predicting content will appear in the terminal and the forecasting model can be stored in the model database. The system reads the predicting models and their parameters are saved in the model database from the module interface, and then the data of the tested samples are transferred into the selected model. Finally the content of soil parameters can be predicted by the developed system. The system was programmed with Visual C++6.0 and Matlab 7.0. And the Access XP was used to create and manage the model database.

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

PubMed

Ramirez, Kelly S; Leff, Jonathan W; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W; Kelly, Eugene F; Oldfield, Emily E; Shaw, E Ashley; Steenbock, Christopher; Bradford, Mark A; Wall, Diana H; Fierer, Noah

2014-11-22

Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Microbial composition in microcosms amended with natural and mineral fertilizers under different water regimes

NASA Astrophysics Data System (ADS)

Brad, Traian; Chiriac, Cecilia; Szekeres, Edina; Coman, Cristian; Rudi, Knut; Sandor, Mignon

2017-04-01

Twenty microcosm enclosures containing two types of soil (i.e. a rich Chernozemic and a poorer soil) were fertilized with mineral (NPK-complex) and organic (Gülle, manure and a green fertilizer) materials and placed under dry and wet water regimes. After 10, 20 and 30 days of the experiment, soil samples were analyzed for the structure and composition of microbial communities using next generation sequencing techniques (Illumina) and statistical analysis. The differences between bacteria communities in different soil types, and in different fertilization and hydric treatments were analyzed using quantitative phylogenetic distances and the ANOSIM test. The two types of soil especially selected for the structure of microbial communities, while moisture and the type of fertilizer appeared to have a smaller influence on microbial diversity in microcosms. The alpha-diversity indices (species richness, evenness and phylogenetic diversity) had higher values for the poorer soil compared to the rich Chernozemic soil. For both soil types, the highest bacteria diversity values were obtained after fertilization with manure. The microbial communities in the analyzed soils were complex and dominated by sequences belonging to Actinobacteria, Proteobacteria, Acidobacteria and Firmicutes.

[Prediction of regional soil quality based on mutual information theory integrated with decision tree algorithm].

PubMed

Lin, Fen-Fang; Wang, Ke; Yang, Ning; Yan, Shi-Guang; Zheng, Xin-Yu

2012-02-01

In this paper, some main factors such as soil type, land use pattern, lithology type, topography, road, and industry type that affect soil quality were used to precisely obtain the spatial distribution characteristics of regional soil quality, mutual information theory was adopted to select the main environmental factors, and decision tree algorithm See 5.0 was applied to predict the grade of regional soil quality. The main factors affecting regional soil quality were soil type, land use, lithology type, distance to town, distance to water area, altitude, distance to road, and distance to industrial land. The prediction accuracy of the decision tree model with the variables selected by mutual information was obviously higher than that of the model with all variables, and, for the former model, whether of decision tree or of decision rule, its prediction accuracy was all higher than 80%. Based on the continuous and categorical data, the method of mutual information theory integrated with decision tree could not only reduce the number of input parameters for decision tree algorithm, but also predict and assess regional soil quality effectively.

Identification and classification of structural soil conservation measures based on very high resolution stereo satellite data.

PubMed

Eckert, Sandra; Tesfay Ghebremicael, Selamawit; Hurni, Hans; Kohler, Thomas

2017-05-15

Land degradation affects large areas of land around the globe, with grave consequences for those living off the land. Major efforts are being made to implement soil and water conservation measures that counteract soil erosion and help secure vital ecosystem services. However, where and to what extent such measures have been implemented is often not well documented. Knowledge about this could help to identify areas where soil and water conservation measures are successfully supporting sustainable land management, as well as areas requiring urgent rehabilitation of conservation structures such as terraces and bunds. This study explores the potential of the latest satellite-based remote sensing technology for use in assessing and monitoring the extent of existing soil and water conservation structures. We used a set of very high resolution stereo Geoeye-1 satellite data, from which we derived a detailed digital surface model as well as a set of other spectral, terrain, texture, and filtered information layers. We developed and applied an object-based classification approach, working on two segmentation levels. On the coarser level, the aim was to delimit certain landscape zones. Information about these landscape zones is useful in distinguishing different types of soil and water conservation structures, as each zone contains certain specific types of structures. On the finer level, the goal was to extract and identify different types of linear soil and water conservation structures. The classification rules were based mainly on spectral, textural, shape, and topographic properties, and included object relationships. This approach enabled us to identify and separate from other classes the majority (78.5%) of terraces and bunds, as well as most hillside terraces (81.25%). Omission and commission errors are similar to those obtained by the few existing studies focusing on the same research objective but using different types of remotely sensed data. Based on our results, we estimate that the construction of the conservation structures in our study area in Eritrea required over 300,000 person-days of work, which underlines the huge efforts involved in soil and water conservation. Copyright © 2017 Elsevier Ltd. All rights reserved.

What are the most crucial soil factors for predicting the distribution of alpine plant species?

NASA Astrophysics Data System (ADS)

Buri, A.; Pinto-Figueroa, E.; Yashiro, E.; Guisan, A.

2017-12-01

Nowadays the use of species distribution models (SDM) is common to predict in space and time the distribution of organisms living in the critical zone. The realized environmental niche concept behind the development of SDM imply that many environmental factors must be accounted for simultaneously to predict species distributions. Climatic and topographic factors are often primary included, whereas soil factors are frequently neglected, mainly due to the paucity of soil information available spatially and temporally. Furthermore, among existing studies, most included soil pH only, or few other soil parameters. In this study we aimed at identifying what are the most crucial soil factors for explaining alpine plant distributions and, among those identified, which ones further improve the predictive power of plant SDMs. To test the relative importance of the soil factors, we performed plant SDMs using as predictors 52 measured soil properties of various types such as organic/inorganic compounds, chemical/physical properties, water related variables, mineral composition or grain size distribution. We added them separately to a standard set of topo-climatic predictors (temperature, slope, solar radiation and topographic position). We used ensemble forecasting techniques combining together several predictive algorithms to model the distribution of 116 plant species over 250 sites in the Swiss Alps. We recorded the variable importance for each model and compared the quality of the models including different soil proprieties (one at a time) as predictors to models having only topo-climatic variables as predictors. Results show that 46% of the soil proprieties tested become the second most important variable, after air temperature, to explain spatial distribution of alpine plants species. Moreover, we also assessed that addition of certain soil factors, such as bulk soil water density, could improve over 80% the quality of some plant species models. We confirm that soil pH remains one of the most important soil factor for predicting plant species distributions, closely followed by water, organic and inorganic carbon related properties. Finally, we were able to extract three main categories of important soil properties for plant species distributions: grain size distribution, acidity and water in the soil.

Microbial functional diversity and enzymatic activity of soil degraded by sulphur mining reclaimed with various waste

NASA Astrophysics Data System (ADS)

Joniec, Jolanta; Frąc, Magdalena

2017-10-01

The aim of the study was to evaluate microbial functional diversity based on community level physiological profiling and β-glucosidase activity changes in soil degraded by sulphur mining and subjected to reclamation with various waste. The experiment was set up in the area of the former `Jeziórko' Sulphur Mine (Poland), on a soilless substrate with a particle size distribution of slightly loamy sand. The experimental variants included the application of post-flotation lime, sewage sludge and mineral wool. The analyses of soil samples included the assessment of the following microbiological indices: β-glucosidase activity and functional diversity average well color development and richness). The results indicate that sewage sludge did not exert a significant impact on the functional diversity of microorganisms present in the reclaimed soil. In turn, the application of other types of waste contributed to a significant increase in the parameters of total metabolic activity and functional diversity of the reclaimed soil. However, the temporal analysis of the metabolic profile of soil microorganisms demonstrated that a single application of waste did not yield a durable, stable metabolic profile in the reclaimed soil. Still, there was an increase in β-glucosidase activity, especially in objects treated with sewage sludge.

Detection techniques for tenuous planetary atmospheres

NASA Technical Reports Server (NTRS)

Hoenig, S. A.

1972-01-01

The research for the development of new types of detectors for analysis of planetary atmospheres is summarized. Topics discussed include: corona discharge humidity detector, surface catalysis and exo-electron emission, and analysis of soil samples by means of exo-electron emission. A report on the exo-electron emission during heterogeneous catalysis is included.

Vegetation Response to Rainfall and Soil Moisture Variability in Botswana

DTIC Science & Technology

1991-01-01

Effects of Varying Soil Type on the NDVI /Rainfall and NDVI /Soil Moisture...examine the effects of different soil types on the vegetation growth/rainfall relationship. The goals are to determine whether differences in the water-use...34first step" in removing the soil effect (Huete et al., 1985). Indeed, no large-scale soil corrections have been attempted as yet on NDVI data.

Wildland fire ash: Production, composition and eco-hydro-geomorphic effects

USGS Publications Warehouse

Bodi, Merche B.; Martin, Deborah; Balfour, Victoria N.; Santin, Cristina; Doerr, Stefan H.; Pereira, Paulo; Cerda, Artemi; Mataix-Solera, Jorge

2014-01-01

Fire transforms fuels (i.e. biomass, necromass, soil organic matter) into materials with different chemical and physical properties. One of these materials is ash, which is the particulate residue remaining or deposited on the ground that consists of mineral materials and charred organic components. The quantity and characteristics of ash produced during a wildland fire depend mainly on (1) the total burned fuel (i.e. fuel load), (2) fuel type and (3) its combustion completeness. For a given fuel load and type, a higher combustion completeness will reduce the ash organic carbon content, increasing the relative mineral content, and hence reducing total mass of ash produced. The homogeneity and thickness of the ash layer can vary substantially in space and time and reported average thicknesses range from close to 0 to 50 mm. Ash is a highly mobile material that, after its deposition, may be incorporated into the soil profile, redistributed or removed from a burned site within days or weeks by wind and water erosion to surface depressions, footslopes, streams, lakes, reservoirs and, potentially, into marine deposits.Research on the composition, properties and effects of ash on the burned ecosystem has been conducted on material collected in the field after wildland and prescribed fires as well as on material produced in the laboratory. At low combustion completeness (typically T < 450 °C), ash is organic-rich, with organic carbon as the main component. At high combustion completeness (T > 450 °C), most organic carbon is volatized and the remaining mineral ash has elevated pH when in solution. It is composed mainly of calcium, magnesium, sodium, potassium, silicon and phosphorous in the form of inorganic carbonates, whereas at T > 580 °C the most common forms are oxides. Ash produced under lower combustion completeness is usually darker, coarser, and less dense and has a higher saturated hydraulic conductivity than ash with higher combustion completeness, although physical reactions with CO2 and when moistened produce further changes in ash characteristics.As a new material present after a wildland fire, ash can have profound effects on ecosystems. It affects biogeochemical cycles, including the C cycle, not only within the burned area, but also globally. Ash incorporated into the soil increases temporarily soil pH and nutrient pools and changes physical properties such as albedo, soil texture and hydraulic properties including water repellency. Ash modifies soil hydrologic behavior by creating a two-layer system: the soil and the ash layer, which can function in different ways depending on (1) ash depth and type, (2) soil type and (3) rainfall characteristics. Key parameters are the ash's water holding capacity, hydraulic conductivity and its potential to clog soil pores. Runoff from burned areas carries soluble nutrients contained in ash, which can lead to problems for potable water supplies. Ash deposition also stimulates soil microbial activity and vegetation growth.Further work is needed to (1) standardize methods for investigating ash and its effects on the ecosystem, (2) characterize ash properties for specific ecosystems and wildland fire types, (3) determine the effects of ash on human and ecosystem health, especially when transported by wind or water, (4) investigate ash's controls on water and soil losses at slope and catchment scales, (5) examine its role in the C cycle, and (6) study its redistribution and fate in the environment.

Ectomycorrhizal fungal associates of Pinus contorta in soils associated with a hot spring in Norris Geyser Basin, Yellowstone National Park, Wyoming

NASA Technical Reports Server (NTRS)

Cullings, K.; Makhija, S.

2001-01-01

Molecular methods and comparisons of fruiting patterns (i.e., presence or absence of fungal fruiting bodies in different soil types) were used to determine ectomycorrhizal (EM) associates of Pinus contorta in soils associated with a thermal soil classified as ultra-acidic to extremely acidic (pH 2 to 4). EM were sampled by obtaining 36 soil cores from six paired plots (three cores each) of both thermal soils and forest soils directly adjacent to the thermal area. Fruiting bodies (mushrooms) were collected for molecular identification and to compare fruiting body (above-ground) diversity to below-ground diversity. Our results indicate (i) that there were significant decreases in both the level of EM infection (130 +/- 22 EM root tips/core in forest soil; 68 +/- 22 EM root tips/core in thermal soil) and EM fungal species richness (4.0 +/- 0.5 species/core in forest soil; 1.2 +/- 0.2 species/core in thermal soil) in soils associated with the thermal feature; (ii) that the EM mycota of thermal soils was comprised of a small set of dominant species and included very few rare species, while the EM mycota of forest soils contained a few dominant species and several rare EM fungal species; (iii) that Dermocybe phoenecius and a species of Inocybe, which was rare in forest soils, were the dominant EM fungal species in thermal soils; (iv) that other than the single Inocybe species, there was no overlap in the EM fungal communities of the forest and thermal soils; and (v) that the fungal species forming the majority of the above-ground fruiting structures in thermal soils (Pisolithus tinctorius, which is commonly used in remediation of acid soils) was not detected on a single EM root tip in either type of soil. Thus, P. tinctorius may have a different role in these thermal soils. Our results suggest that this species may not perform well in remediation of all acid soils and that factors such as pH, soil temperature, and soil chemistry may interact to influence EM fungal community structure. In addition, we identified at least one new species with potential for use in remediation of hot acidic soil.

Key parameters in testing biodegradation of bio-based materials in soil.

PubMed

Briassoulis, D; Mistriotis, A

2018-09-01

Biodegradation of plastics in soil is currently tested by international standard testing methods (e.g. ISO 17556-12 or ASTM D5988-12). Although these testing methods have been developed for plastics, it has been shown in project KBBPPS that they can be extended also to lubricants with small modifications. Reproducibility is a critical issue regarding biodegradation tests in the laboratory. Among the main testing variables are the soil types and nutrients available (mainly nitrogen). For this reason, the effect of the soil type on the biodegradation rates of various bio-based materials (cellulose and lubricants) was tested for five different natural soil types (loam, loamy sand, clay, clay-loam, and silt-loam organic). It was shown that use of samples containing 1 g of C in a substrate of 300 g of soil with the addition of 0.1 g of N as nutrient strongly improves the reproducibility of the test making the results practically independent of the soil type with the exception of the organic soil. The sandy soil was found to need addition of higher amount of nutrients to exhibit similar biodegradation rates as those achieved with the other soil types. Therefore, natural soils can be used for Standard biodegradation tests of bio-based materials yielding reproducible results with the addition of appropriate nutrients. Copyright © 2018 Elsevier Ltd. All rights reserved.

[Variation of soil organic carbon under different vegetation types in Karst Mountain areas of Guizhou Province, southwest China].

PubMed

Liao, Hong-kai; Long, Jian

2011-09-01

This paper studied the variation characteristics of soil organic carbon (SOC) and different particle sizes soil particulate organic carbon (POC) in normal soil and in micro-habitats under different vegetation types in typical Karst mountain areas of southwest Guizhou. Under different vegetation types, the SOC content in normal soil and in micro-habitats was all in the order of bare land < grass < shrub < forest, with the variation range being 7.18-43.42 g x kg(-1) in normal soil and being 6.62-46.47 g x kg(-1) and 9.01-52.07 g x kg(-1) in earth surface and stone pit, respectively. The POC/MOC (mineral-associated organic carbon) ratio under different vegetation types was in the order of bare land < grass < forest < shrub. Under the same vegetation types, the POC/MOC in stone pit was the highest, as compared to that in normal soil and in earth surface. In the process of bare land-grass-shrub-forest, the contents of different particle sizes soil POC increased, while the SOC mainly existed in the forms of sand- and silt organic carbon, indicating that in Karst region, soil carbon sequestration and SOC stability were weak, soil was easily subjected to outside interference and led to organic carbon running off, and thus, soil quality had the risk of decline or degradation.

Quantitative analyses of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in fields with different soil types.

PubMed

Morimoto, Sho; Hayatsu, Masahito; Takada Hoshino, Yuko; Nagaoka, Kazunari; Yamazaki, Masatsugu; Karasawa, Toshihiko; Takenaka, Makoto; Akiyama, Hiroko

2011-01-01

Soil type is one of the key factors affecting soil microbial communities. With regard to ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB), however, it has not been determined how soil type affects their community size and soil nitrification activity. Here we quantitatively analyzed the ammonia monooxygenase genes (amoA) of these ammonia oxidizers in fields with three different soil types (Low-humic Andosol [LHA], Gray Lowland Soil [GLS], and Yellow Soil [YS]) under common cropping conditions, and assessed the relationships between soil nitrification activity and the abundance of each amoA. Nitrification activity of LHA was highest, followed by that of GLS and YS; this order was consistent with that for the abundance of AOB amoA. Abundance of AOB amoA showed temporal variation, which was similar to that observed in nitrification activity, and a strong relationship (adjusted R(2)=0.742) was observed between the abundance of AOB amoA and nitrification activity. Abundance of AOA amoA also exhibited a significant relationship (adjusted R(2)=0.228) with nitrification activity, although this relationship was much weaker. Our results indicate that soil type affects the community size of AOA and AOB and the resulting nitrification activity, and that AOB are major contributors to nitrification in soils, while AOA are partially responsible.

Estimating Surface Soil Moisture in Simulated AVIRIS Spectra

NASA Technical Reports Server (NTRS)

Whiting, Michael L.; Li, Lin; Ustin, Susan L.

2004-01-01

Soil albedo is influenced by many physical and chemical constituents, with moisture being the most influential on the spectra general shape and albedo (Stoner and Baumgardner, 1981). Without moisture, the intrinsic or matrix reflectance of dissimilar soils varies widely due to differences in surface roughness, particle and aggregate sizes, mineral types, including salts, and organic matter contents. The influence of moisture on soil reflectance can be isolated by comparing similar soils in a study of the effects that small differences in moisture content have on reflectance. However, without prior knowledge of the soil physical and chemical constituents within every pixel, it is nearly impossible to accurately attribute the reflectance variability in an image to moisture or to differences in the physical and chemical constituents in the soil. The effect of moisture on the spectra must be eliminated to use hyperspectral imagery for determining minerals and organic matter abundances of bare agricultural soils. Accurate soil mineral and organic matter abundance maps from air- and space-borne imagery can improve GIS models for precision farming prescription, and managing irrigation and salinity. Better models of soil moisture and reflectance will also improve the selection of soil endmembers for spectral mixture analysis.

Fungal community composition in soils subjected to long-term chemical fertilization is most influenced by the type of organic matter.

PubMed

Sun, Ruibo; Dsouza, Melissa; Gilbert, Jack A; Guo, Xisheng; Wang, Daozhong; Guo, Zhibin; Ni, Yingying; Chu, Haiyan

2016-12-01

Organic matter application is a widely used practice to increase soil carbon content and maintain soil fertility. However, little is known about the effect of different types of organic matter, or the input of exogenous species from these materials, on soil fungal communities. In this study, fungal community composition was characterized from soils amended with three types of organic matter over a 30-year fertilization experiment. Chemical fertilization significantly changed soil fungal community composition and structure, which was exacerbated by the addition of organic matter, with the direction of change influenced by the type of organic matter used. The addition of organic matter significantly increased soil fungal richness, with the greatest richness achieved in soils amended with pig manure. Importantly, following addition of cow and pig manure, fungal taxa associated with these materials could be found in the soil, suggesting that these exogenous species can augment soil fungal composition. Moreover, the addition of organic matter decreased the relative abundance of potential pathogenic fungi. Overall, these results indicate that organic matter addition influences the composition and structure of soil fungal communities in predictable ways. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

Environmental Evaluation of Soil Salinity with Various Watering Technologies Assessment.

PubMed

Seitkaziev, Adeubay; Shilibek, Kenzhegali; Fakhrudenova, Idiya; Salybayev, Satybaldy; Zhaparova, Sayagul; Duisenbayeva, Saule; Bayazitova, Zulfia; Aliya, Maimakova; Seitkazieva, Karlygash; Aubakirov, Hamit

2018-01-01

  The purpose of this study is to develop mathematical tools for evaluating the level of environmental safety of various watering technologies. A set of indicators, was developed with regard to the natural factors, the nature of the man-induced load, degradation type, and characteristics of the disruption of humification conditions. Thermal and physical characteristics of the soil, the state of its surface, and meteorological factors, including air temperature, relative humidity, precipitation, wind speed, solar radiation, etc. were studied with a view to determining the heat and air exchange in the soil. An environmental evaluation of the methods for saline land development was conducted with regard to the heat and moisture supply. This tool can be used to determine the level of environmental safety of soil salinization during the environmental evaluation of the investigation of soil salinity with various watering technologies.

Improvement of Expansive Soils Using Chemical Stabilizers

NASA Astrophysics Data System (ADS)

Ikizler, S. B.; Senol, A.; Khosrowshahi, S. K.; Hatipoğlu, M.

2014-12-01

The aim of this study is to investigate the effect of two chemical stabilizers on the swelling potential of expansive soil. A high plasticity sodium bentonite was used as the expansive soil. The additive materials including fly ash (FA) and lime (L) were evaluated as potential stabilizers to decrease the swelling pressure of bentonite. Depending on the type of additive materials, they were blended with bentonite in different percentages to assess the optimum state and approch the maximum swell pressure reduction. According to the results of swell pressure test, both fly ash and lime reduce the swelling potential of bentonite but the maximum improvement occurs using bentonite-lime mixture while the swelling pressure reduction approaches to 49%. The results reveal a significant reduction of swelling potential of expansive soil using chemical stabilizers. Keywords: Expansive soil; swell pressure; chemical stabilization; fly ash; lime

Metam Sodium and Metam Potassium Fumigant Management Plan Phase 2 Templates

EPA Pesticide Factsheets

These templates provide a framework for structuring and reporting a plan for this type of pesticide product. Required data fields include application block size, buffer zone signage, soil conditions, and tarp plans.

Intraspecific variation in growth of marsh macrophytes in response to salinity and soil type: Implications for wetland restoration

USGS Publications Warehouse

Howard, R.J.

2010-01-01

Genetic diversity within plant populations can influence plant community structure along environmental gradients. In wetland habitats, salinity and soil type are factors that can vary along gradients and therefore affect plant growth. To test for intraspecific growth variation in response to these factors, a greenhouse study was conducted using common plants that occur in northern Gulf of Mexico brackish and salt marshes. Individual plants of Distichlis spicata, Phragmites australis, Schoenoplectus californicus, and Schoenoplectus robustus were collected from several locations along the coast in Louisiana, USA. Plant identity, based on collection location, was used as a measure of intraspecific variability. Prepared soil mixtures were organic, silt, or clay, and salinity treatments were 0 or 18 psu. Significant intraspecific variation in stem number, total stem height, or biomass was found in all species. Within species, response to soil type varied, but increased salinity significantly decreased growth in all individuals. Findings indicate that inclusion of multiple genets within species is an important consideration for marsh restoration projects that include vegetation plantings. This strategy will facilitate establishment of plant communities that have the flexibility to adapt to changing environmental conditions and, therefore, are capable of persisting over time. ?? Coastal and Estuarine Research Federation 2009.

Predictor variable resolution governs modeled soil types

USDA-ARS?s Scientific Manuscript database

Soil mapping identifies different soil types by compressing a unique suite of spatial patterns and processes across multiple spatial scales. It can be quite difficult to quantify spatial patterns of soil properties with remotely sensed predictor variables. More specifically, matching the right scale...

Impact of Land Use Management and Soil Properties on Denitrifier Communities of Namibian Savannas.

PubMed

Braker, Gesche; Matthies, Diethart; Hannig, Michael; Brandt, Franziska Barbara; Brenzinger, Kristof; Gröngröft, Alexander

2015-11-01

We studied potential denitrification activity and the underlying denitrifier communities in soils from a semiarid savanna ecosystem of the Kavango region in NE Namibia to help in predicting future changes in N(2)O emissions due to continuing changes of land use in this region. Soil type and land use (pristine, fallow, and cultivated soils) influenced physicochemical characteristics of the soils that are relevant to denitrification activity and N(2)O fluxes from soils and affected potential denitrification activity. Potential denitrification activity was assessed by using the denitrifier enzyme activity (DEA) assay as a proxy for denitrification activity in the soil. Soil type and land use influenced C and N contents of the soils. Pristine soils that had never been cultivated had a particularly high C content. Cultivation reduced soil C content and the abundance of denitrifiers and changed the composition of the denitrifier communities. DEA was strongly and positively correlated with soil C content and was higher in pristine than in fallow or recently cultivated soils. Soil type and the composition of both the nirK- and nirS-type denitrifier communities also influenced DEA. In contrast, other soil characteristics like N content, C:N ratio, and pH did not predict DEA. These findings suggest that due to greater availability of soil organic matter, and hence a more effective N cycling, the natural semiarid grasslands emit more N(2)O than managed lands in Namibia.

Soil types effect on grape and wine composition in Helan Mountain area of Ningxia.

PubMed

Wang, Rui; Sun, Quan; Chang, Qingrui

2015-01-01

Different soil types can significantly affect the composition of wine grapes and the final wine product. In this study, the effects of soil types on the composition of Cabernet Sauvignon grapes and wine produced in the Helan Mountains were evaluated. Three different representative soil types--aeolian, sierozem and irrigation silting soil were studied. The compositions of grapes and wines were measured, and in addition, the weights of 100-berry samples were determined. The grapes that grown on the aeolian and sierozem soils matured sooner than those grown on the irrigation silting soil. The highest sugar content, total soluble solids content, sugar to acid ratio and anthocyanin content were found in the grapes that grown on the aeolian soil. The wine produced from this soil had improved chroma and tone and higher-quality phenols. The grapes grown on the sierozem soil had the highest total phenol and tannin contents, which affected the wine composition. The grapes grown on the irrigation silting soil had higher acidities, but the remaining indices were lower. In addition, the grapes grown on the aeolian soil resulted in wines with better chroma and aroma. The sierozem soil was beneficial for the formation of wine tannins and phenols and significantly affected the wine composition. The quality of the grapes from the irrigation silting soil was relatively low, resulting in lower-quality wine.

[Relationships of soil organic carbon with its active and non-active components under different land use types in the middle reaches of Heihe River, China].

PubMed

Zhang, Jun-Hua; Li, Guo-Dong; Wang, Yan-Song; Nan, Zhong-Ren; Zhao, Li-Ping

2012-12-01

Taking the seven typical land use types (paddy field, dry land, medium coverage grassland, saline-alkali field, bare land, desert, and sandlot) in the middle reaches of Heihe River as test objects, this paper studied the relationships of soil organic carbon content with its components. In the 0-100 cm soil profile, the contents of soil total organic carbon (TOC) , active organic carbon (AOC), and non-active organic carbon (NOC) decreased with increasing depth. The soil TOC, AOC, and NOC contents differed with land use type. Land use change induced the increase or decrease of soil organic carbon content. The tillage in paddy field was an available way to increase the contents of soil TOC, AOC, and NOC. After land use change, soil NOC rather than AOC contributed more to soil TOC content. For the same land use types, soil AOC and NOC contents increased together with increasing soil TOC content, and the NOC content increased faster than the AOC content. The soil TOC content corresponding to the crossing point of the variation trend lines of soil AOC and NOC contents could be considered as the boundary point of TOC accumulation or loss, and the saturation capacities of soil AOC and NOC could be obtained by the variation trend lines of the AOC and NOC.

Nutrient properties of five West Virginia forest soils

Treesearch

L. R. Auchmoody

1972-01-01

Nutrient levels in five well-drained forest soils of the northern mountain section of West Virginia were generally associated with the type of parent rocks from which the soils had formed. But in some instances, different rock types yielded soils of similar nutrient composition. Soils formed from limestone and calcareous shale were usually higher in fertility than...

Effect of Soil Type and Moisture Availability on the Foraging Behavior of the Formosan Subterranean Termite (Isoptera: Rhinotermitidae)

USDA-ARS?s Scientific Manuscript database

This study examined the influence of soil type and moisture availability on termite foraging behavior. Physical properties of the soil affected both tunneling behavior and mud tube construction. Termites tunneled through sand faster than top soil and clay. In containers with top soil and clay, termi...

[Effects of Land Use Type on Soil Microbial Biomass Carbon and Nitrogen in Water-Stable Aggregates in Jinyun Mountain].

PubMed

Li, Zeng-quan; Jiang, Chang-sheng; Hao, Qing-ju

2015-11-01

In this study, four land use types including subtropical evergreen broad-leaved forest (abbreviation: forest), sloping farmland, orchard and abandoned land were selected to collect soil samples from 0 to 60 cm depth at the same altitude in Jinyun Mountain. Four sizes of large macroaggregates (> 2 mm), small macroaggregates (0.25-2 mm), microaggregates (0.053-0.25 mm) and silt + clay (< 0.053 mm) were achieved by wet sieving method and the contents of microbial biomass carbon (MBC) and microbial biomass nitrogen (MBN) in each aggregate fraction were measured to study the impacts of the different land use types on MBC and MBN in soil aggregates. The results showed that the contents of MBC and MBN in all aggregates in the four land use types decreased with the increasing soil depth. Except large macroaggregetes, the contents of MBC and MBN in the other three soil aggregates decreased when the forest was reclamated into orchard and sloping farmland. MBC and MBN contents in large macroaggregates, small macroaggregates and microaggregates all increased when the sloping farmland was abandoned. The storages of organic carbon and nitrogen in soil depth of 0-60 cm in the four proportions were calculated by the equivalent soil mass method. The results revealed that MBC storages in the other three sizes except silt + clay were higher in the forest than those in orchard and sloping land. And MBC storages in the all aggregates were higher in the abandoned land than those in the sloping land. MBN storages in small macroaggregates and microaggregates were higher in the forest than those in orchard and sloping land. And MBN storages in the other three aggregates except silt + clay were higher in the abandoned land than those in the sloping land. Generally speaking, the storages of MBC in soil aggregates of forest and abandoned land were higher than in orchard and sloping land, MBN storage in soil aggregates of forest was nearly equal to the storage in orchard. However, the storages of MBN in soil aggregates of forest and abandoned land were higher than those in sloping land. The results showed that the reclamation of the forest resulted in the loss of MBC and MBN in soil aggregates of sloping land. However, the abandon of the sloping land contributed to the acumulation of MBC and MBN in soil aggregates. In the process of land use change, the direction and quantity of change in MBC in the soil aggregates were not consistent with those of the total soil organic carbon, which meant the microbial quotient in soil aggregates was not suitable for using to evaluate the impact of land use change on soil quality, using the total organic carbon as an index to express the sensitivity of the land use change may be better.

Impact of soil properties on critical concentrations of cadmium, lead, copper, zinc, and mercury in soil and soil solution in view of ecotoxicological effects.

PubMed

de Vries, Wim; Lofts, Steve; Tipping, Ed; Meili, Markus; Groenenberg, Jan E; Schütze, Gudrun

2007-01-01

Risk assessment for metals in terrestrial ecosystems, including assessments of critical loads, requires appropriate critical limits for metal concentrations in soil and soil solution. This chapter presents an overview of methodologies used to derive critical (i) reactive and total metal concentrations in soils and (ii) free metal ion and total metal concentrations in soil solution for Cd, Pb, Cu, Zn, and Hg, taking into account the effect of soil properties related to ecotoxicological effects. Most emphasis is given to the derivation of critical free and total metal concentrations in soil solution, using available NOEC soil data and transfer functions relating solid-phase and dissolved metal concentrations. This approach is based on the assumption that impacts on test organisms (plants, microorganisms, and soil invertebrates) are mainly related to the soil solution concentration (activity) and not to the soil solid-phase content. Critical Cd, Pb, Cu, Zn, and Hg concentrations in soil solution vary with pH and DOC level. The results obtained are generally comparable to those derived for surface waters based on impacts to aquatic organisms. Critical soil metal concentrations, related to the derived soil solution limits, can be described as a function of pH and organic matter and clay content, and varying about one order of magnitude between different soil types.

Evaluation of AMSR2 soil moisture products over the contiguous United States using in situ data from the International Soil Moisture Network

NASA Astrophysics Data System (ADS)

Wu, Qiusheng; Liu, Hongxing; Wang, Lei; Deng, Chengbin

2016-03-01

High quality soil moisture datasets are required for various environmental applications. The launch of the Advanced Microwave Scanning Radiometer 2 (AMSR2) on board the Global Change Observation Mission 1-Water (GCOM-W1) in May 2012 has provided global near-surface soil moisture data, with an average revisit frequency of two days. Since AMSR2 is a new passive microwave system in operation, it is very important to evaluate the quality of AMSR2 products before widespread utilization of the data for scientific research. In this paper, we provide a comprehensive evaluation of the AMSR2 soil moisture products retrieved by the Japan Aerospace Exploration Agency (JAXA) algorithm. The evaluation was performed for a three-year period (July 2012-June 2015) over the contiguous United States. The AMSR2 soil moisture products were evaluated by comparing ascending and descending overpass products to each other as well as comparing them to in situ soil moisture observations of 598 monitoring stations obtained from the International Soil Moisture Network (ISMN). The accuracy of AMSR2 soil moisture product was evaluated against several types of monitoring networks, and for different land cover types and ecoregions. Three performance metrics, including mean difference (MD), root mean squared difference (RMSD), and correlation coefficient (R), were used in our accuracy assessment. Our evaluation results revealed that AMSR2 soil moisture retrievals are generally lower than in situ measurements. The AMSR2 soil moisture retrievals showed the best agreement with in situ measurements over the Great Plains and the worst agreement over forested areas. This study offers insights into the suitability and reliability of AMSR2 soil moisture products for different ecoregions. Although AMSR2 soil moisture retrievals represent useful and effective measurements for some regions, further studies are required to improve the data accuracy.

DGT technique to assess P mobilization from greenhouse vegetable soils in China: A novel approach.

PubMed

Kalkhajeh, Yusef Kianpoor; Sørensen, Helle; Huang, Biao; Guan, Dong-Xing; Luo, Jun; Hu, Wenyou; Holm, Peter E; Hansen, Hans Christian Bruun

2018-07-15

Intensive phosphorus (P) inputs to plastic-covered greenhouse vegetable production (PGVP) in China has led to excessive soil P accumulation increasing the potential for leaching to surface waters. This study examined the mobility and hence the potential risk of P losses through correlations between soil solution P (P Sol ) and soil extractable P as determined by conventional soil P test methods (STPs) including degree of P saturations (DPSs), and diffusive gradient in thin-films (DGT P) technique. A total of 75 topsoil samples were chosen from five representative Chinese PGVPs covering a wide range of physiochemical soil properties and cultivation history. Total P and Olsen P contents varied from 260 to 4900, and 5 to 740mgkg -1 , respectively, while P Sol concentrations were between 0.01 and 10.8mgL -1 reflecting the large differences in vegetation history, fertilization schemes, and soil types. Overall, DGT P provided the best correlation with P Sol (r 2 =0.97) demonstrating that DGT P is a versatile measure of P mobility regardless of soil type. Among the DPSs tested, oxalate extractable Al (DPS Ox-Al ) had the best correlation with P Sol (r 2 =0.87). In the STP versus P Sol relationships, STP break-points above which P mobilization increases steeply were 513μgL -1 and 190mgkg -1 for DGT P or Olsen P, respectively, corresponding to P Sol concentration of 0.88mgL -1 . However, for P Sol concentration of 0.1mgL -1 that initiates eutrophication, the corresponding DGT P and Olsen P values were 27μgL -1 and 22mgkg -1 , respectively. Over 80% of the investigated soils had DGT P and Olsen P above these values, and thus are at risk of P mobilization threatening receiving waters by eutrophication. This paper demonstrates that the DGT extracted P is a powerful measure for soluble P and hence for assessment of P mobility from a broad range of soil types. Copyright © 2018 Elsevier B.V. All rights reserved.

Liming impacts on soils, crops and biodiversity in the UK: A review.

PubMed

Holland, J E; Bennett, A E; Newton, A C; White, P J; McKenzie, B M; George, T S; Pakeman, R J; Bailey, J S; Fornara, D A; Hayes, R C

2018-01-01

Fertile soil is fundamental to our ability to achieve food security, but problems with soil degradation (such as acidification) are exacerbated by poor management. Consequently, there is a need to better understand management approaches that deliver multiple ecosystem services from agricultural land. There is global interest in sustainable soil management including the re-evaluation of existing management practices. Liming is a long established practice to ameliorate acidic soils and many liming-induced changes are well understood. For instance, short-term liming impacts are detected on soil biota and in soil biological processes (such as in N cycling where liming can increase N availability for plant uptake). The impacts of liming on soil carbon storage are variable and strongly relate to soil type, land use, climate and multiple management factors. Liming influences all elements in soils and as such there are numerous simultaneous changes to soil processes which in turn affect the plant nutrient uptake; two examples of positive impact for crops are increased P availability and decreased uptake of toxic heavy metals. Soil physical conditions are at least maintained or improved by liming, but the time taken to detect change varies significantly. Arable crops differ in their sensitivity to soil pH and for most crops there is a positive yield response. Liming also introduces implications for the development of different crop diseases and liming management is adjusted according to crop type within a given rotation. Repeated lime applications tend to improve grassland biomass production, although grassland response is variable and indirect as it relates to changes in nutrient availability. Other indicators of liming response in grassland are detected in mineral content and herbage quality which have implications for livestock-based production systems. Ecological studies have shown positive impacts of liming on biodiversity; such as increased earthworm abundance that provides habitat for wading birds in upland grasslands. Finally, understanding of liming impacts on soil and crop processes are explored together with functional aspects (in terms of ecosystems services) in a new qualitative framework that includes consideration of how liming impacts change with time. This holistic approach provides insights into the far-reaching impacts that liming has on ecosystems and the potential for liming to enhance the multiple benefits from agriculturally managed land. Recommendations are given for future research on the impact of liming and the implications for ecosystem services. Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.

Electrical Imaging of Infiltration in Agricultural Soils on Long Island, New York

NASA Astrophysics Data System (ADS)

Lampousis, A.; Kenyon, P. M.; Sanwald, K.; Steiner, N.

2007-12-01

High resolution electrical resistivity imaging of vadose zone infiltration experiments was conducted on agricultural soils by the City College and Graduate Center of CUNY, in cooperation with Cornell University's Agricultural Stewardship Program and Long Island Horticultural Research and Extension Center (LIHREC) in Riverhead, New York. Measurements were made in active vineyards with a commercial resistivity imaging system, using a half- meter electrode spacing. Soils considered were Riverhead sandy loam (RdA), Haven loam (HaA), and Bridgehampton silty loam (BgA). The Riverhead and Haven soils are the most common types found on eastern Long Island. The Bridgehampton is considered the most fertile. Soil samples and measurements of soil compaction were collected at the same time as the geophysical measurements. In addition, remote sensing data were obtained for the three sites and processed to produce normalized difference vegetation index (NDVI) data to evaluate potential correlations between vegetation vigor, soil texture and water migration patterns. Applications of this study include continuous water content monitoring in high value cash crops (precision agriculture). Changes in electrical resistivity during infiltration are clearly visible at all three locations. Preliminary analysis of the results shows correlations of baseline resistivity with particle size distributions and correlations between changes in resistivity during infiltration and soil compaction data. Time-lapse electrical images of the three sites will also be compared with published properties for these soils, including particle size distribution, saturated hydraulic conductivity, available water capacity, and surface texture.

[Effects of sand burial on fluxes of greenhouse gases from the soil covered by biocrust in an arid desert region.

PubMed

Teng, Jia Ling; Jia, Rong Liang; Hu, Yi Gang; Xu, Bing Xin; Chen, Meng Chen; Zhao, Yun

2016-03-01

Based on the measurements of the fluxes of CO 2 , CH 4 and N 2 O from the soil covered by two types of biocrusts dominated separately by moss and algae-lichen, followed by 0 (control), 1 (shallow) and 10 (deep) mm depths of sand burial treatments, we studied the effects of sand burial on greenhouse gases fluxes and their relationships with soil temperature and moisture at Shapotou, southeastern edge of the Tengger Desert. The results showed that sand burial had significantly positive effects on CO 2 emission fluxes and CH 4 uptake fluxes of the soil covered by the two types of biocrusts, but imposed differential effects on N 2 O fluxes depending on the type of biocrust and the depth of burial. Deep burial (10 mm) dramatically increased the N 2 O uptake fluxes of the soil co-vered by the two types of biocrusts, while shallow burial (1 mm) decreased the N 2 O uptake flux of the soil co-vered by moss crust only and had no significant effects on N 2 O uptake flux of the soil covered by algae-lichen crust. In addition, CO 2 fluxes of the two biocrusts were closely related to the soil temperature and soil moisture, thereby increasing with the raised soil surface temperature and soil moisture caused by sand burial. However, the relationships of burial-induced changes of soil temperature and moisture with the changes in the other two greenhouse gases fluxes were not evident, indicating that the variations of soil temperature and moisture caused by sand burial were not the key factors affecting the fluxes of CH 4 and N 2 O of the soil covered by the two types of biocrusts.

[Evaluation of soil quality under different land use types in Naban River watershed, Yunnan Province of Southwest China].

PubMed

Xie, Jin; Li, Zhao-Li; Li, Yong-Mei; Guo, Fang-Fang

2011-12-01

Eighty-six topsoil (0-20 cm) samples were collected from 8 land use types (natural forest land, maize field, tea garden, paddy field, rubber plantation, flax field, banana plantation, and sugarcane field) in the Naban River Watershed National Nature Reserve and its surrounding areas, and the soil physical and chemical properties were analyzed, aimed to study the effects of land use type on the soil quality by the method of soil quality index (SQI). Comparing with natural forest land, all the cultivated lands had somewhat decreased soil organic matter content and higher soil bulk density, and the soil bulk density was significantly higher in tea garden, paddy field, rubber plantation, and banana plantation. In cultivated lands, fertilization and reclamation made the soil available potassium and phosphorus contents maintained at a higher level, probably due to the input of mineral potassium and phosphorus and the decomposition of soil organic matter. The SQI of the 8 land use types was in the order of flax field (0.595) > natural forest land (0.532) > maize field (0.516) > banana plantation (0.485) tea garden (0.480) sugarcane field (0.463) > paddy field (0.416) > rubber plantation (0.362). The soils in higher altitude production demonstration areas (1614 +/-115 m) had significant higher SQI, compared to the soils in lower altitude buffer areas (908 +/- 98 m) and junction areas (926 +/- 131 m). Among the 8 land use types, the rubber plantation in lower altitude areas had the lowest SQI, due to the lower soil organic matter and available potassium and phosphorus contents and the highest soil bulk density. Application of organic manure or intercropping with leguminous plants could be an available practice to improve the soil quality of the rubber plantation.

Influence of soil types and osmotic pressure on growth and 137Cs accumulation in blackgram (Vigna mungo L.).

PubMed

Win, Khin Thuzar; Oo, Aung Zaw; Bellingrath-Kimura, Sonoko Dorothea

2017-04-01

A pot experiment was conducted to study the effects of soil types and osmotic levels on growth and 137 Cs accumulation in two blackgram varieties differing in salinity tolerance grown in Fukushima contaminated soils. The contamination levels of the sandy clay loam and clay soil were 1084 and 2046 Bq kg -1 DW, respectively. The 137 Cs activity was higher in both plants grown on the sandy clay loam than on the clay soil regardless of soil 137 Cs activity concentration. No significant differences were observed in all measured growth parameters between the two varieties under optimal water conditions for both types of soil. However, the growth, leaf water contents and 137 Cs activity concentrations in both plants were lower in both soil types when there was water stress induced by addition of polyethylene glycol. Water stress-induced reduction in total leaf area and total biomass, in addition to leaf relative water content, were higher in salt sensitive 'Mut Pe Khaing To' than in salt tolerant 'U-Taung-2' plants for both soil types. Varietal difference in decreased 137 Cs uptake under water stress was statically significant in the sandy clay loam soil, however, it was not in the clay soil. The transfer of 137 Cs from soil to plants (i.e., root, stem and leaf) was higher for the sandy clay loam for both plants when compared with those of the clay soil. The decreased activity of 137 Cs in the above ground samples (leaf and stem) in both plants in response to osmotic stress suggested that plant available 137 Cs decreased when soil water is limited by osmotic stress. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil factors involved in the diversity and structure of soil bacterial communities in commercial organic olive orchards in Southern Spain.

PubMed

Landa, B B; Montes-Borrego, M; Aranda, S; Soriano, M A; Gómez, J A; Navas-Cortés, J A

2014-04-01

Nowadays, there is a tendency in olive production systems to reduce tillage or keep a vegetative cover to reduce soil erosion and degradation. However, there is scarce information on the effects of different soil management systems (SMS) in soil bacterial community composition of olive groves. In this study, we have evaluated the effects of soil type and different SMS implemented to control weeds in the structure and diversity of bacterial communities of 58 soils in the two geographic areas that best represent the organic olive production systems in Spain. Bacterial community composition assessed by frequency and intensity of occurrence of terminal restriction profiles (TRFs) derived from terminal restriction fragment length polymorphism (T-RFLP) analysis of amplified 16S ribosomal deoxyribonucleic acid were strongly correlated with soil type/field site (Eutric/Calcaric) that differed mainly in soil particle size distribution and soil pH, followed by a strong effect of SMS, in that order. Canonical discriminant (CD) analysis of TRFs properly classified all of the olive orchard soils as belonging to their respective soil type or SMS. Furthermore, only a small set of TRFs were enough to clearly and significantly differentiate soil samples according to soil type or SMS. Those specific TRFs could be used as bioindicators to assess the effect of changes in SMS aimed to enhance soil quality in olive production systems. © 2014 Society for Applied Microbiology and John Wiley & Sons Ltd.

What are the most important factors determining different vegetation types in the Chapada Diamantina, Brazil?

PubMed

Neves, S P S; Funch, R; Conceição, A A; Miranda, L A P; Funch, L S

2016-06-01

A transect was used to examine the environmental and biological descriptors of a compact vegetation mosaic in the Chapada Diamantina in northeastern Brazil, including the floristic composition, spectrum of plant life forms, rainfall, and soil properties that defined areas of cerrado (Brazilian savanna), caatinga (seasonally dry tropical forest thorny, deciduous shrub/arboreal vegetation) and cerrado-caatinga transition vegetation. The floristic survey was made monthly from April/2009 to March/2012. A dendrogram of similarity was generated using the Jaccard Index based on a matrix of the species that occurred in at least two of the vegetation types examined. The proportions of life forms in each vegetation type were compared using the chi-square test. Composite soil samples were analyzed by simple variance (ANOVA) to examine relationships between soil parameters of each vegetation type and the transition area. The monthly precipitation levels in each vegetation type were measured and compared using the chi-square test. A total of 323 species of angiosperms were collected distributed in 193 genera and 54 families. The dendrogram demonstrated strong difference between the floristic compositions of the cerrado and caatinga, sharing 2% similarity. The chi-square test did not demonstrate any significant statistical differences between the monthly values of recorded rainfall. The organic matter and clay contents of the soilsin the caatinga increased while sand decreased, and the proportions of therophyte, hemicryptophyte, and chamaephyte life forms decreased and phanerophytes increased. We can therefore conclude that the floristic composition and the spectrum of life forms combined to define the cerrado and caatinga vegetation along the transect examined, with soil being the principal conditioning factor determining the different vegetation types, independent of precipitation levels.

Mapping of nematode distribution and assessment of its ecological status using GIS techniques in Plovdiv region, Bulgaria.

PubMed

Bileva, T; Arnaudova, Zh

2011-01-01

The current investigation was carried out in selected vineyards in Plovdiv region, South Bulgaria. The GIS database was created including factors influenced on nematode distribution in the soil. The plant-parasitic nematodes from family Longidoridae associated with grapevine and soil type of the region were described. The impact of longidorids as virus vectors and some ecological aspects of their occurrence in vineyards in South Bulgaria are discussed.

Advances in understanding, models and parameterisations of biosphere-atmosphere ammonia exchange

NASA Astrophysics Data System (ADS)

Flechard, C. R.; Massad, R.-S.; Loubet, B.; Personne, E.; Simpson, D.; Bash, J. O.; Cooter, E. J.; Nemitz, E.; Sutton, M. A.

2013-03-01

Atmospheric ammonia (NH3) dominates global emissions of total reactive nitrogen (Nr), while emissions from agricultural production systems contribute about two thirds of global NH3 emissions; the remaining third emanates from oceans, natural vegetation, humans, wild animals and biomass burning. On land, NH3 emitted from the various sources eventually returns to the biosphere by dry deposition to sink areas, predominantly semi-natural vegetation, and by wet and dry deposition as ammonium (NH4+) to all surfaces. However, the land/atmosphere exchange of gaseous NH3 is in fact bi-directional over unfertilized as well as fertilized ecosystems, with periods and areas of emission and deposition alternating in time (diurnal, seasonal) and space (patchwork landscapes). The exchange is controlled by a range of environmental factors, including meteorology, surface layer turbulence, thermodynamics, air and surface heterogeneous-phase chemistry, canopy geometry, plant development stage, leaf age, organic matter decomposition, soil microbial turnover, and, in agricultural systems, by fertilizer application rate, fertilizer type, soil type, crop type, and agricultural management practices. We review the range of processes controlling NH3 emission and uptake in the different parts of the soil-canopy-atmosphere continuum, with NH3 emission potentials defined at the substrate and leaf levels by different [NH4+] / [H+] ratios (Γ). Surface/atmosphere exchange models for NH3 are necessary to compute the temporal and spatial patterns of emissions and deposition at the soil, plant, field, landscape, regional and global scales, in order to assess the multiple environmental impacts of air-borne and deposited NH3 and NH4+. Models of soil/vegetation/atmosphereem NH3 exchange are reviewed from the substrate and leaf scales to the global scale. They range from simple steady-state, "big leaf" canopy resistance models, to dynamic, multi-layer, multi-process, multi-chemical species schemes. Their level of complexity depends on their purpose, the spatial scale at which they are applied, the current level of parameterisation, and the availability of the input data they require. State-of-the-art solutions for determining the emission/sink Γ potentials through the soil/canopy system include coupled, interactive chemical transport models (CTM) and soil/ecosystem modelling at the regional scale. However, it remains a matter for debate to what extent realistic options for future regional and global models should be based on process-based mechanistic versus empirical and regression-type models. Further discussion is needed on the extent and timescale by which new approaches can be used, such as integration with ecosystem models and satellite observations.

Advances in understanding, models and parameterizations of biosphere-atmosphere ammonia exchange

NASA Astrophysics Data System (ADS)

Flechard, C. R.; Massad, R.-S.; Loubet, B.; Personne, E.; Simpson, D.; Bash, J. O.; Cooter, E. J.; Nemitz, E.; Sutton, M. A.

2013-07-01

Atmospheric ammonia (NH3) dominates global emissions of total reactive nitrogen (Nr), while emissions from agricultural production systems contribute about two-thirds of global NH3 emissions; the remaining third emanates from oceans, natural vegetation, humans, wild animals and biomass burning. On land, NH3 emitted from the various sources eventually returns to the biosphere by dry deposition to sink areas, predominantly semi-natural vegetation, and by wet and dry deposition as ammonium (NH4+) to all surfaces. However, the land/atmosphere exchange of gaseous NH3 is in fact bi-directional over unfertilized as well as fertilized ecosystems, with periods and areas of emission and deposition alternating in time (diurnal, seasonal) and space (patchwork landscapes). The exchange is controlled by a range of environmental factors, including meteorology, surface layer turbulence, thermodynamics, air and surface heterogeneous-phase chemistry, canopy geometry, plant development stage, leaf age, organic matter decomposition, soil microbial turnover, and, in agricultural systems, by fertilizer application rate, fertilizer type, soil type, crop type, and agricultural management practices. We review the range of processes controlling NH3 emission and uptake in the different parts of the soil-canopy-atmosphere continuum, with NH3 emission potentials defined at the substrate and leaf levels by different [NH4+] / [H+] ratios (Γ). Surface/atmosphere exchange models for NH3 are necessary to compute the temporal and spatial patterns of emissions and deposition at the soil, plant, field, landscape, regional and global scales, in order to assess the multiple environmental impacts of airborne and deposited NH3 and NH4+. Models of soil/vegetation/atmosphere NH3 exchange are reviewed from the substrate and leaf scales to the global scale. They range from simple steady-state, "big leaf" canopy resistance models, to dynamic, multi-layer, multi-process, multi-chemical species schemes. Their level of complexity depends on their purpose, the spatial scale at which they are applied, the current level of parameterization, and the availability of the input data they require. State-of-the-art solutions for determining the emission/sink Γ potentials through the soil/canopy system include coupled, interactive chemical transport models (CTM) and soil/ecosystem modelling at the regional scale. However, it remains a matter for debate to what extent realistic options for future regional and global models should be based on process-based mechanistic versus empirical and regression-type models. Further discussion is needed on the extent and timescale by which new approaches can be used, such as integration with ecosystem models and satellite observations.

Trace gas emissions following deposition of excreta by grazing dairy cows in eastern Canada

NASA Astrophysics Data System (ADS)

Rochette, P.; Pelster, D. E.; Chantigny, M. H.; Angers, D. A.; Liang, C.; Belanger, G.; Ziadi, N.; Charbonneau, E.; Pellerin, D.

2012-04-01

The N2O emission factor proposed for cattle excreta N by the Tier I IPCC methodology (EF3) is 2% (IPCC, 2006). While N2O emissions from excreta deposited by grazing animals have been reported in several publications, relatively few estimated EF3 values because measurements did not cover the entire year. This study measured N2O and CH4 flux and crop dry matter (DM) yield over two years (2009 to 2011) from a clay and a sandy loam soil cultivated with Timothy grass (Phleum pratense L.). A split-plot design was used on each soil type, with different application dates (either spring, summer or autumn application) as main plots and treatment (U-50: urine 50 g N m-2, U-100: urine 100 g N m-2, dung: 60 g N m-2, and control) as the sub-plots. Regardless of application time, annual DM yield increased in all treated plots when compared to the control. Also, DM yields were generally greater when urine as opposed to dung was applied suggesting greater N-availability from the urine application. The CH4 flux from the dung plots increased for only the first two weeks after treatment while the flux from the urine plots was similar to the control plots. Cumulative N2O emissions on the U-50 and U-100 plots increased linearly with urine N rate on both soils, resulting in nearly identical mean emission factors for both urine rates. The emission factor for the urine was three times greater on the clay (1.02% of applied N on both rates) than on the sandy loam soil (0.26% (U100) and 0.31% (U50) of applied N). Cumulative N2O emissions from dung plots also differed between soil types; however the impact of soil type on N2O emissions was opposite to that of urine, with greater losses from the sandy loam (0.15%) compared with the clay soil (0.07%). These results suggest that estimates of soil N2O emissions by grazing cattle in Eastern Canada obtained using the IPCC default methodology are overestimates of actual values and that these estimates for should include a stratification according to soil type.

Evidence for ecological divergence across a mosaic of soil types in an Amazonian tropical tree: Protium subserratum (Burseraceae).

PubMed

Misiewicz, Tracy M; Fine, Paul V A

2014-05-01

Soil heterogeneity is an important driver of divergent natural selection in plants. Neotropical forests have the highest tree diversity on earth, and frequently, soil specialist congeners are distributed parapatrically. While the role of edaphic heterogeneity in the origin and maintenance of tropical tree diversity is unknown, it has been posited that natural selection across the patchwork of soils in the Amazon rainforest is important in driving and maintaining tree diversity. We examined genetic and morphological differentiation among populations of the tropical tree Protium subserratum growing parapatrically on the mosaic of white-sand, brown-sand and clay soils found throughout western Amazonia. Nuclear microsatellites and leaf morphology were used to (i) quantify the extent of phenotypic and genetic divergence across habitat types, (ii) assess the importance of natural selection vs. drift in population divergence, (iii) determine the extent of hybridization and introgression across habitat types, (iv) estimate migration rates among populations. We found significant morphological variation correlated with soil type. Higher levels of genetic differentiation and lower migration rates were observed between adjacent populations found on different soil types than between geographically distant populations on the same soil type. PST -FST comparisons indicate a role for natural selection in population divergence among soil types. A small number of hybrids were detected suggesting that gene flow among soil specialist populations may occur at low frequencies. Our results suggest that edaphic specialization has occurred multiple times in P. subserratum and that divergent natural selection across edaphic boundaries may be a general mechanism promoting and maintaining Amazonian tree diversity. © 2014 John Wiley & Sons Ltd.

Temporary vs. Permanent Sub-slab Ports: A Comparative ...

EPA Pesticide Factsheets

Vapor intrusion (VI) is the migration of subsurface vapors, including radon and volatile organic compounds (VOCs), from the subsurface to indoor air. The VI exposure pathway extends from the contaminant source, which can be impacted soil, non-aqueous phase liquid, or contaminated groundwater, to indoor air-exposure points. Therefore, contaminated matrices may include groundwater, soil, soil gas, and indoor air. VOC contaminants of concern typically include halogenated solvents such as trichloroethene, tetrachloroethene, and chloroform, as well as petroleum hydrocarbons, such as the aromatic VOCs benzene, toluene, and xylenes. Radon is a colorless radioactive gas that is released by radioactive decay of radionuclides in rock and soil that migrate into homes through VI in a similar fashion to VOCs. This project focused on the performance of permanent versus temporary sub-slab sampling ports for the determination of VI of halogenated VOCs and radon into an unoccupied house. VOC and radon concentrations measured simultaneously in soil gas using collocated temporary and permanent ports appeared to be independent of the type of port. The variability between collocated temporary and permanent ports was much less than the spatial variability between different locations within a single residential duplex. The agreement of the majority of VOC and radon concentrations, 0–36% relative percent difference, and 2–19% relative standard deviation respectively, of each sub-sl

Multivariate soil fertility relationships for predicting the environmental persistence of 2,4,6-trinitrotoluene (TNT) and 1,3,5-trinitro-1,3,5-tricyclohexane (RDX) among taxonomically distinct soils.

PubMed

Katseanes, Chelsea K; Chappell, Mark A; Hopkins, Bryan G; Durham, Brian D; Price, Cynthia L; Porter, Beth E; Miller, Lesley F

2017-12-01

After nearly a century of use in numerous munition platforms, TNT and RDX contamination has turned up largely in the environment due to ammunition manufacturing or as part of releases from low-order detonations during training activities. Although the basic knowledge governing the environmental fate of TNT and RDX are known, accurate predictions of TNT and RDX persistence in soil remain elusive, particularly given the universal heterogeneity of pedomorphic soil types. In this work, we proposed overcoming this problem by considering the environmental persistence of these munition constituents (MC) as multivariate mathematical functions over a variety of taxonomically distinct soil types, instead of a single constant or parameter of a specific absolute value. To test this idea, we conducted experiments where the disappearance kinetics of TNT and RDX were measured over a >300 h period in taxonomically distinct soils. Classical fertility-based soil measurements were log-transformed, statistically decomposed, and correlated to TNT and RDX disappearance rates (k -TNT and k -RDX ) using multivariate dimension-reduction and correlation techniques. From these efforts, we generated multivariate linear functions for k parameters across different soil types based on a statistically reduced set of their chemical and physical properties: Calculations showed that the soil properties exhibited strong covariance, with a prominent latent structure emerging as the basis for relative comparisons of the samples in reduced space. Loadings describing TNT degradation were largely driven by properties associated with alkaline/calcareous soil characteristics, while the degradation of RDX was attributed to the soil organic matter content - reflective of an important soil fertility characteristic. In spite of the differing responses to the munitions, batch data suggested that the overall nutrient dynamics were consistent for each soil type, as well as readily distinguishable from the other soil types used in this study. Thus, we hypothesized that the latent structure arising from the strong covariance of full multivariate geochemical matrix describing taxonomically distinguished "soil types" may provide the means for potentially predicting complex phenomena in soils. Published by Elsevier Ltd.

Updating categorical soil maps using limited survey data by Bayesian Markov chain cosimulation.

PubMed

Li, Weidong; Zhang, Chuanrong; Dey, Dipak K; Willig, Michael R

2013-01-01

Updating categorical soil maps is necessary for providing current, higher-quality soil data to agricultural and environmental management but may not require a costly thorough field survey because latest legacy maps may only need limited corrections. This study suggests a Markov chain random field (MCRF) sequential cosimulation (Co-MCSS) method for updating categorical soil maps using limited survey data provided that qualified legacy maps are available. A case study using synthetic data demonstrates that Co-MCSS can appreciably improve simulation accuracy of soil types with both contributions from a legacy map and limited sample data. The method indicates the following characteristics: (1) if a soil type indicates no change in an update survey or it has been reclassified into another type that similarly evinces no change, it will be simply reproduced in the updated map; (2) if a soil type has changes in some places, it will be simulated with uncertainty quantified by occurrence probability maps; (3) if a soil type has no change in an area but evinces changes in other distant areas, it still can be captured in the area with unobvious uncertainty. We concluded that Co-MCSS might be a practical method for updating categorical soil maps with limited survey data.

Updating Categorical Soil Maps Using Limited Survey Data by Bayesian Markov Chain Cosimulation

PubMed Central

Dey, Dipak K.; Willig, Michael R.

2013-01-01

Updating categorical soil maps is necessary for providing current, higher-quality soil data to agricultural and environmental management but may not require a costly thorough field survey because latest legacy maps may only need limited corrections. This study suggests a Markov chain random field (MCRF) sequential cosimulation (Co-MCSS) method for updating categorical soil maps using limited survey data provided that qualified legacy maps are available. A case study using synthetic data demonstrates that Co-MCSS can appreciably improve simulation accuracy of soil types with both contributions from a legacy map and limited sample data. The method indicates the following characteristics: (1) if a soil type indicates no change in an update survey or it has been reclassified into another type that similarly evinces no change, it will be simply reproduced in the updated map; (2) if a soil type has changes in some places, it will be simulated with uncertainty quantified by occurrence probability maps; (3) if a soil type has no change in an area but evinces changes in other distant areas, it still can be captured in the area with unobvious uncertainty. We concluded that Co-MCSS might be a practical method for updating categorical soil maps with limited survey data. PMID:24027447

The role of soil biogeochemistry in wine taste: Soil factors influencing grape elemental composition, photosynthetic biomarkers and Cu/Zn isotopic signature of Vitis vinifera

NASA Astrophysics Data System (ADS)

Blotevogel, Simon; Oliva, Priscia; Darrozes, José; Viers, Jérôme; Audry, Stéphane; Courjault-Radé, Pierre; Orgogozo, Laurent; Le Guedard, Marina; Schreck, Eva

2015-04-01

Understanding the influence of soil composition in wine taste is of great economic and environmental interest in France and around the world. Nevertheless the impact of soil composition on wine taste is still controversially discussed. Since inorganic soil components do not have a proper taste and do not enter the plant anyway, their influence needs to be induced by nutrient absorption and its impact on plant functioning and grape composition. Indeed recent development of geological tracers of origin proof the existence of soil chemical and isotopic signatures in wine. However, type and scale of the impact of soil composition on wine taste are not well understood yet, and little experimental evidence exists due to the complexity of mechanisms involved. Thus, to provide evidence for the impact of soil composition on grape composition and potentially wine taste, we studied soil and plant material from two relevant vineyards (Soave, Italia). On those two directly adjacent vineyards, two different wines are produced with the same plant material and cultivation techniques. The vineyards only differ by their underlying bedrock - limestone versus basaltic rock - and thus present suitable conditions for investigating the impact of soil composition on grapes and wine. Pedological and mineralogical parameters were analyzed for the two vineyards whereas chemical extractions (citrate, CaCl2) were performed to determine nutrient bioavailability in both soils. Elemental compositions were determined by ICP-MS analyses in different compartments (soils, vine leaves and grapes). Isotopic fractionation of Cu and Zn was investigated in various samples as source tracers and in order to better understand fractionation mechanisms involved. Finally, plant health was studied using the Omega-3 biomarker which determines the fatty acid composition in vine leaves, directly involved in photosynthetic processes. Results show that the vineyards are characterized by two different soil types due to the geological difference. These soils differ in elemental compositions and bioavailability of mineral nutrients, preconditions for a potential influence on plants and wine. Elemental ratios of soils are partly transmitted to leaves and grapes of correspondent plants, including nutrients such as Ca. Plant photosynthetic functioning is significantly better on the limestone vineyard due to lower Cu bioavailability: Omega-3 values are negatively linked to Cu bioavailability in corresponding soils. These observations suggest a difference in organic molecule synthesis depending on the vineyard soil, which might include components relevant for taste and fermentation. Cu and Zn isotopic ratios do not differ between both soils. The main fractionation of Cu and Zn isotopes occurs at the soil-plant interface making those isotopes suitable tracers for uptake mechanisms. As a result Zn isotope ratios reveal a strong recycling of Zn in the soil-plant continuum. Our results show a significant influence of soil composition on grape composition, plant biochemistry and potentially wine taste. Determination of organic and sensorial composition of grapes and wine is ongoing and will be discussed in further communications.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cink, J.H.; Coats, J.R.

Dursban TC has become the most widely used insecticide for the control of termites since the banning of chlordane. Several laboratory studies have been conducted to investigate the degradation kinetics of chlorpyrifos applied to soil at termiticide rates. These have included a limited number of soil types and have utilized tightly regulated environmental conditions. A field study was established to investigate the degradation of chlorpyrifos in soil treated with a 1% solution via trench application and under natural environmental conditions. Once treated, soil samples were removed from the trench at scheduled intervals and extracted to determine the concentration chlorpyrifos remaining.more » In three of the soils studied, the concentration of chlorpyrifos decreased dramatically within the first three months. The remaining soils showed a steady decline in concentration over 12 months. After this initial phase of degradation, the slope of the degradation curve changed sharply. This may indicate that chlorpyrifos undergoes two phases of degradation in soil. Using both phases of the degradation curves may give a better estimate of the concentration of chlorpyrifos that may be present in a soil at any time period.« less

A statistical and experimental approach for assessing the preservation of plant lipids in soil

NASA Astrophysics Data System (ADS)

Mueller, K. E.; Eissenstat, D. M.; Oleksyn, J.; Freeman, K. H.

2011-12-01

Plant-derived lipids contribute to stable soil organic matter, but further interpretations of their abundance in soils are limited because the factors that control lipid preservation are poorly understood. Using data from a long-term field experiment and simple statistical models, we provide novel constraints on several predictors of the concentration of hydrolyzable lipids in forest mineral soils. Focal lipids included common monomers of cutin, suberin, and plant waxes present in tree leaves and roots. Soil lipid concentrations were most strongly influenced by the concentrations of lipids in leaves and roots of the overlying trees, but were also affected by the type of lipid (e.g. alcohols vs. acids), lipid chain length, and whether lipids originated in leaves or roots. Collectively, these factors explained ~80% of the variation in soil lipid concentrations beneath 11 different tree species. In order to use soil lipid analyses to test and improve conceptual models of soil organic matter stabilization, additional studies that provide experimental and quantitative (i.e. statistical) constraints on plant lipid preservation are needed.

Deep Compaction Control of Sandy Soils

NASA Astrophysics Data System (ADS)

Bałachowski, Lech; Kurek, Norbert

2015-02-01

Vibroflotation, vibratory compaction, micro-blasting or heavy tamping are typical improvement methods for the cohesionless deposits of high thickness. The complex mechanism of deep soil compaction is related to void ratio decrease with grain rearrangements, lateral stress increase, prestressing effect of certain number of load cycles, water pressure dissipation, aging and other effects. Calibration chamber based interpretation of CPTU/DMT can be used to take into account vertical and horizontal stress and void ratio effects. Some examples of interpretation of soundings in pre-treated and compacted sands are given. Some acceptance criteria for compaction control are discussed. The improvement factors are analysed including the normalised approach based on the soil behaviour type index.

Butterfly Gardens.

ERIC Educational Resources Information Center

Denman, Kim

1996-01-01

Describes designing and planting a garden to attract butterflies specifically as a project for school grounds. Site and soil requirements are covered as well as types of plants. Includes a list of educational opportunities a garden provides in various subject areas. (AIM)

A tropical freshwater wetlands: I. Structure, growth, and regeneration

USGS Publications Warehouse

Allen, J.A.; Krauss, K.W.; Ewel, K.C.; Keeland, B.D.; Waguk, E.E.

2005-01-01

Forested wetlands dominated by Terminalia carolinensis are endemic to Micronesia but common only on the island of Kosrae, Federated States of Micronesia. On Kosrae, these forests occur on Nansepsep, Inkosr, and Sonahnpil soil types, which differ in degree of flooding and soil saturation. We compared forest structure, growth, nutrition, and regeneration on two sites each on Nansepsep and Inkosr soils and one site on the much less common Sonahnpil soil type. Terminalia tree sizes were similar on all three soil types, but forests differed in total basal area, species of smaller trees, and total plant species diversity. Terminalia regeneration was found only on the Inkosr soil type, which had the highest water table levels. Other Terminalia species are relatively light demanding, and T. carolinensis exhibited similar characteristics. It is therefore likely that Terminalia requires periodic, but perhaps naturally rare, stand-replacing disturbances (e.g., typhoons) in order to maintain its dominanace, except on the wettest sites, where competition from other species is reduced. Terminalia swamps in the Nansepsep soil type appeared to be at the greatest risk of conversion to other uses, but swamps on all three types may face reater pressure as Kosrae's population increases and the island's infrastrucure becomes more developed.

The preservation of microbial DNA in archived soils of various genetic types.

PubMed

Ivanova, Ekaterina A; Korvigo, Ilia O; Aparin, Boris F; Chirak, Evgenii L; Pershina, Elizaveta V; Romaschenko, Nikolay S; Provorov, Nikolai A; Andronov, Evgeny E

2017-01-01

This study is a comparative analysis of samples of archived (stored for over 70-90 years) and modern soils of two different genetic types-chernozem and sod-podzolic soils. We revealed a reduction in biodiversity of archived soils relative to their modern state. Particularly, long-term storage in the museum exerted a greater impact on the microbiomes of sod-podzolic soils, while chernozem samples better preserved the native community. Thus, the persistence of microbial DNA in soil is largely determined by the physico-chemical characteristics that differ across soil types. Chernozems create better conditions for the long-term DNA preservation than sod-podzolic soils. This results in supposedly higher levels of biodiversity conservation in the microbiomes of chernozem with preservation of major microbial taxa dominant in the modern (control) soil samples, which makes archived chernozems a promising object for paleosoil studies.

Humus and nitrogen in soddy-podzolic soils of different agricultural lands in Perm region

NASA Astrophysics Data System (ADS)

Zav'yalova, N. E.

2016-11-01

Heavy loamy soddy-podzolic soils (Eutric Albic Retisols (Abruptic, Loamic, Cutanic)) under a mixed forest, a grass-herb meadow, a perennial legume crop (fodder galega, Galéga orientalis), and an eightcourse crop rotation (treatment without fertilization) have been characterized by the main fertility parameters. Differences have been revealed in the contents of humus and essential nutrients in the 0- to 20- and 20- to 40-cm layers of soils of the studied agricultural lands. The medium acid reaction and the high content of ash elements and nitrogen in stubble-root residues of legume grasses favor the accumulation of humic acids in the humus of soil under fodder galega; the CHA/CFA ratio is 0.95 in the 0- to 20-cm layer and 0.81 in the 20- to 40-cm layer (under forest, 0.61 and 0.41, respectively). The nitrogen pool in the upper horizon of the studied soddy-podzolic soil includes 61-76% nonhydrolyzable nitrogen and 17-25% difficultly hydrolyzable nitrogen. The content of easily hydrolyzable nitrogen varies depending on the type of agricultural land from 6% in the soil under mixed forest to 10% under crop rotation; the content of mineral nitrogen varies from 0.9 to 1.9%, respectively. The long-term use of plowland in crop rotation and the cultivation of perennial legume crop have increased the content of hydrolyzable nitrogen forms but have not changed the proportions of nitrogen fractions characteristic of this soil type.

Context dependency and saturating effects of loss of rare soil microbes on plant productivity.

PubMed

Hol, W H Gera; de Boer, Wietse; de Hollander, Mattias; Kuramae, Eiko E; Meisner, Annelein; van der Putten, Wim H

2015-01-01

Land use intensification is associated with loss of biodiversity and altered ecosystem functioning. Until now most studies on the relationship between biodiversity and ecosystem functioning focused on random loss of species, while loss of rare species that usually are the first to disappear received less attention. Here we test if the effect of rare microbial species loss on plant productivity depends on the origin of the microbial soil community. Soils were sampled from three land use types at two farms. Microbial communities with increasing loss of rare species were created by inoculating sterilized soils with serially diluted soil suspensions. After 8 months of incubation, the effects of the different soil communities on abiotic soil properties, soil processes, microbial community composition, and plant productivity was measured. Dilution treatments resulted in increasing species loss, which was in relation to abundance of bacteria in the original field soil, without affecting most of the other soil parameters and processes. Microbial species loss affected plant biomass positively, negatively or not at all, depending on soil origin, but not on land use history. Even within fields the effects of dilution on plant biomass varied between replicates, suggesting heterogeneity in microbial community composition. The effects of medium and severe species loss on plant biomass were similar, pointing toward a saturating effect of species loss. We conclude that changes in the composition of the soil microbial community, including rare species loss, can affect plant productivity, depending on the composition of the initial microbial community. Future work on the relation between function and species loss effects should address this variation by including multiple sampling origins.

Estonian soil classification as a tool for recording information on soil cover and its matching with local site types, plant covers and humus forms classifications

NASA Astrophysics Data System (ADS)

Kõlli, Raimo; Tõnutare, Tõnu; Rannik, Kaire; Krebstein, Kadri

2015-04-01

Estonian soil classification (ESC) has been used successfully during more than half of century in soil survey, teaching of soil science, generalization of soil databases, arrangement of soils sustainable management and others. The Estonian normally developed (postlithogenic) mineral soils (form 72.4% from total area) are characterized by mean of genetic-functional schema, where the pedo-ecological position of soils (ie. location among other soils) is given by means of three scalars: (i) 8 stage lithic-genetic scalar (from rendzina to podzols) separates soils each from other by parent material, lithic properties, calcareousness, character of soil processes and others, (ii) 6 stage moisture and aeration conditions scalar (from aridic or well aerated to permanently wet or reductic conditions), and (iii) 2-3 stage soil development scalar, which characterizes the intensity of soil forming processes (accumulation of humus, podzolization). The organic soils pedo-ecological schema, which links with histic postlithogenic soils, is elaborated for characterizing of peatlands superficial mantle (form 23.7% from whole soil cover). The position each peat soil species among others on this organic (peat) soil matrix schema is determined by mean of 3 scalars: (i) peat thickness, (ii) type of paludification or peat forming peculiarities, and (iii) stage of peat decomposition or peat type. On the matrix of abnormally developed (synlithogenic) soils (all together 3.9%) the soil species are positioned (i) by proceeding in actual time geological processes as erosion, fluvial processes (at vicinity of rivers, lakes or sea) or transforming by anthropogenic and technological processes, and (ii) by 7 stage moisture conditions (from aridic to subaqual) of soils. The most important functions of soil cover are: (i) being a suitable environment for plant productivity; (ii) forming adequate conditions for decomposition, transformation and conversion of falling litter (characterized by humus cover type); (iii) being compartment for deposition of humus, individual organic compounds, plant nutrition elements, air and water, and (iv) forming (bio)chemically variegated active space for soil type specific edaphon. For studying of ESC matching with others ecosystem compartments classifications the comparative analysis of corresponding classification schemas was done. It may be concluded that forest and natural grasslands site types as well the plant associations of forests and grasslands correlate (match) well with ESC and therefore these compartments may be adequately expressed on soil cover matrixes. Special interest merits humus cover (in many countries known as humus form), which is by the issue natural body between plant and soil or plant cover and soil cover. The humus cover, which lied on superficial part of soil cover, has been formed by functional interrelationships of plants and soils, reflects very well the local pedo-ecological conditions (both productivity and decomposition cycles) and, therefore, the humus cover types are good indicators for characterizing of local pedo-ecological conditions. The classification of humus covers (humus forms) should be bound with soil classifications. It is important to develop a pedocentric approach in treating of fabric and functioning of natural and agro-ecosystems. Such, based on soil properties, ecosystem approach to management and protection natural resources is highly recommended at least in temperate climatic regions. The sound matching of soil and plant cover is of decisive importance for sustainable functioning of ecosystem and in attaining a good environmental status of the area.

From plot to regional scales: Effect of land use and soil type on soil erosion in the southern Amazon

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Schultze, Nico; Amorim, Ricardo S. S.; Schmidt, Jürgen

2015-04-01

The corridor along the Brazilian Highway 163 in the Southern Amazon is affected by radical changes in land use patterns. In order to enable a model based assessment of erosion risks on different land use and soil types a transportable disc type rainfall simulator is applied to identify the most important infiltration and erosion parameters of the EROSION 3D model. Since particle detachment highly depends on experimental plot length, a combined runoff supply is used for the virtually extension of the plot length to more than 20 m. Simulations were conducted on the most common regional land use, soil management and soil types for dry and wet runs. The experiments are characterized by high final infiltration rates (0.3 - 2.5 mm*min^-1), low sediment concentrations (0.2-6.5 g*L^-1) and accordingly low soil loss rates (0.002-50 Kg*m^-2), strongly related to land use, applied management and soil type. Ploughed pastures and clear cuts reveal highest soil losses whereas croplands are less affected. Due to higher aggregate stabilities Ferrasols are less endangered than Acrisols. Derived model parameters are plausible, comparable to existing data bases and reproduce the effects of land use and soil management on soil loss. Thus it is possible to apply the EROSION 3D soil loss model in Southern Amazonia for erosion risk assessment and scenario simulation under changing climate and land use conditions.

Soil Characteristics Driving Arbuscular Mycorrhizal Fungal Communities in Semiarid Mediterranean Soils

PubMed Central

Torres, Maria Pilar; Montesinos-Navarro, Alicia; Roldán, Antonio

2016-01-01

ABSTRACT We investigated communities of arbuscular mycorrhizal fungi (AMF) in the roots and the rhizosphere soil of Brachypodium retusum in six different natural soils under field conditions. We explored phylogenetic patterns of AMF composition using indicator species analyses to find AMF associated with a given habitat (root versus rhizosphere) or soil type. We tested whether the AMF characteristics of different habitats or contrasting soils were more closely related than expected by chance. Then we used principal-component analysis and multivariate analysis of variance to test for the relative contribution of each factor in explaining the variation in fungal community composition. Finally, we used redundancy analysis to identify the soil properties that significantly explained the differences in AMF communities across soil types. The results pointed out a tendency of AMF communities in roots to be closely related and different from those in the rhizosphere soil. The indicator species analyses revealed AMF associated with rhizosphere soil and the root habitat. Soil type also determined the distribution of AMF communities in soils, and this effect could not be attributed to a single soil characteristic, as at least three soil properties related to microbial activity, i.e., pH and levels of two micronutrients (Mn and Zn), played significant roles in triggering AMF populations. IMPORTANCE Communities of arbuscular mycorrhizal fungi (AMF) are main components of soil biota that can determine the productivity of ecosystems. These fungal assemblages vary across host plants and ecosystems, but the main ecological processes that shape the structures of these communities are still largely unknown. A field study in six different soil types from semiarid areas revealed that AMF communities are significantly influenced by habitat (soil versus roots) and soil type. In addition, three soil properties related to microbiological activity (i.e., pH and manganese and zinc levels) were the main factors triggering the distribution of AMF. These results contribute to a better understanding of the ecological factors that can shape AMF communities, an important soil microbial group that affects multiple ecosystem functions. PMID:27016567

Soil Characteristics Driving Arbuscular Mycorrhizal Fungal Communities in Semiarid Mediterranean Soils.

PubMed

Alguacil, Maria Del Mar; Torres, Maria Pilar; Montesinos-Navarro, Alicia; Roldán, Antonio

2016-06-01

We investigated communities of arbuscular mycorrhizal fungi (AMF) in the roots and the rhizosphere soil of Brachypodium retusum in six different natural soils under field conditions. We explored phylogenetic patterns of AMF composition using indicator species analyses to find AMF associated with a given habitat (root versus rhizosphere) or soil type. We tested whether the AMF characteristics of different habitats or contrasting soils were more closely related than expected by chance. Then we used principal-component analysis and multivariate analysis of variance to test for the relative contribution of each factor in explaining the variation in fungal community composition. Finally, we used redundancy analysis to identify the soil properties that significantly explained the differences in AMF communities across soil types. The results pointed out a tendency of AMF communities in roots to be closely related and different from those in the rhizosphere soil. The indicator species analyses revealed AMF associated with rhizosphere soil and the root habitat. Soil type also determined the distribution of AMF communities in soils, and this effect could not be attributed to a single soil characteristic, as at least three soil properties related to microbial activity, i.e., pH and levels of two micronutrients (Mn and Zn), played significant roles in triggering AMF populations. Communities of arbuscular mycorrhizal fungi (AMF) are main components of soil biota that can determine the productivity of ecosystems. These fungal assemblages vary across host plants and ecosystems, but the main ecological processes that shape the structures of these communities are still largely unknown. A field study in six different soil types from semiarid areas revealed that AMF communities are significantly influenced by habitat (soil versus roots) and soil type. In addition, three soil properties related to microbiological activity (i.e., pH and manganese and zinc levels) were the main factors triggering the distribution of AMF. These results contribute to a better understanding of the ecological factors that can shape AMF communities, an important soil microbial group that affects multiple ecosystem functions. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

A coactive interdisciplinary research program with NASA

NASA Technical Reports Server (NTRS)

Rouse, J. W., Jr.

1972-01-01

The applications area of the Texas A&M University remote sensing program consists of a series of coactive projects with NASA/MSC personnel. In each case, the Remote Sensing Center has served to complement and enhance the research capability within the Manned Spacecraft Center. In addition to the applications study area, the Texas A&M University program includes coordinated projects in sensors and data analysis. Under the sensors area, an extensive experimental study of microwave radiometry for soil moisture determination established the effect of soil moisture on the measured brightness temperature for several different soil types. The data analysis area included a project which ERTS-A and Skylab data were simulated using aircraft multispectral scanner measurements at two altitudes. This effort resulted in development of a library of computer programs which provides an operational capability in classification analysis of multispectral data.

Presence and Persistence of Viable, Clinically Relevant Legionella pneumophila Bacteria in Garden Soil in the Netherlands

PubMed Central

van Heijnsbergen, E.; van Deursen, A.; Bouwknegt, M.; Bruin, J. P.; Schalk, J. A. C.

2016-01-01

ABSTRACT Garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. Legionella bacteria were detected in 22 of 177 garden soil samples (12%) by amoebal coculture. Of these 22 Legionella-positive soil samples, seven contained Legionella pneumophila. Several other species were found, including the pathogenic Legionella longbeachae (4 gardens) and Legionella sainthelensi (9 gardens). The L. pneumophila isolates comprised 15 different sequence types (STs), and eight of these STs were previously isolated from patients according to the European Working Group for Legionella Infections (EWGLI) database. Six gardens that were found to be positive for L. pneumophila were resampled after several months, and in three gardens, L. pneumophila was again isolated. One of these gardens was resampled four times throughout the year and was found to be positive for L. pneumophila on all occasions. IMPORTANCE Tracking the source of infection for sporadic cases of Legionnaires' disease (LD) has proven to be hard. L. pneumophila ST47, the sequence type that is most frequently isolated from LD patients in the Netherlands, is rarely found in potential environmental sources. As L. pneumophila ST47 was previously isolated from a garden soil sample during an outbreak investigation, garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. The detection of viable, clinically relevant Legionella strains indicates that garden soil is a potential source of Legionella bacteria, and future research should assess the public health implication of the presence of L. pneumophila in garden soil. PMID:27316958

Presence and Persistence of Viable, Clinically Relevant Legionella pneumophila Bacteria in Garden Soil in the Netherlands.

PubMed

van Heijnsbergen, E; van Deursen, A; Bouwknegt, M; Bruin, J P; de Roda Husman, A M; Schalk, J A C

2016-09-01

Garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. Legionella bacteria were detected in 22 of 177 garden soil samples (12%) by amoebal coculture. Of these 22 Legionella-positive soil samples, seven contained Legionella pneumophila Several other species were found, including the pathogenic Legionella longbeachae (4 gardens) and Legionella sainthelensi (9 gardens). The L. pneumophila isolates comprised 15 different sequence types (STs), and eight of these STs were previously isolated from patients according to the European Working Group for Legionella Infections (EWGLI) database. Six gardens that were found to be positive for L. pneumophila were resampled after several months, and in three gardens, L. pneumophila was again isolated. One of these gardens was resampled four times throughout the year and was found to be positive for L. pneumophila on all occasions. Tracking the source of infection for sporadic cases of Legionnaires' disease (LD) has proven to be hard. L. pneumophila ST47, the sequence type that is most frequently isolated from LD patients in the Netherlands, is rarely found in potential environmental sources. As L. pneumophila ST47 was previously isolated from a garden soil sample during an outbreak investigation, garden soils were investigated as reservoirs and potential sources of pathogenic Legionella bacteria. The detection of viable, clinically relevant Legionella strains indicates that garden soil is a potential source of Legionella bacteria, and future research should assess the public health implication of the presence of L. pneumophila in garden soil. Copyright © 2016 van Heijnsbergen et al.

Decreasing soil erosion rates with evolving land-use techniques in a central European catchment

NASA Astrophysics Data System (ADS)

Larsen, Annegret; Heckmann, Tobias; Hans-Rudolf, Bork; Alexander, Fuelling

2015-04-01

Agricultural societies around the world have caused accelerated soil erosion. Soil erosion and a decrease in soil fertility may also have caused the abandonment of entire landscapes and the collapse of civilizations. In central Europe, Medieval land-use is thought to have lead to the largest loss of top soil in history, which in turn lead to a malnutrition of the population and abandonment of agricultural land. However, this might be only part of the picture, as people are also able to adapt to changing environmental conditions, including the type of land-use they adopt. Within a catchment in the central European mountain belt, we were able to distinguish the evolution between three main types of land-use techniques between ~ 900 AD and 1950 AD: horticulture, agriculture and shifting cultivation. We were able to relate these techniques with different soil erosion rates, which differ by an order of magnitude, ranging from 0.83 ± 0.09 mm/yr to 1.62 ± 0.17 mm/yr. Using high-resolution surface data and chrono-stratigraphical methods in combination with soil charcoal analysis, we were able to reconstruct past land-use techniques on a local scale. This illustrates that less erosive and more sustainable techniques were developed through time, and hypothesize that people were able to adapt to the less favorable environmental conditions by changing the cultivation techniques. Although cultural adaptation to changing environmental conditions has been extensively discussed, this study is able to quantitatively demonstrate improved soil management with evolving land-use in central Europe.

Verification and completion of a soil data base for process based erosion model applications in Mato Grosso/Brazil

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Schultze, Nico; Schönke, Daniela; Amorim, Ricardo S. S.; Schmidt, Jürgen

2014-05-01

The study area of central Mato Grosso is subjected to severe soil erosion. Continuous erosion leads to massive losses of top soil and related organic carbon. Consequently agricultural soil soils suffer a drop in soil fertility which only can be balanced by mineral fertilization. In order to control soil degradation and organic carbon losses of Mato Grosso cropland soils a process based soil loss and deposition model is used. Applying the model it will be possible to: - identify the main areas affected by soil erosion or deposition in different scales under present and future climate and socio-economic conditions - estimate the related nutrient and organic carbon losses/yields - figure out site-related causes of soil mobilization/deposition - locate sediment and sediment related nutrient and organic matter pass over points into surface water bodies - estimate the impacts of climate and land use changes on the losses of top soil, sediment bound nutrients and organic carbon. Model input parameters include digital elevation data, precipitation characteristics and standard soil properties as particle size distribution, total organic carbon (TOC) and bulk density. The effects of different types of land use and agricultural management practices are accounted for by varying site-specific parameters predominantly related to soil surface properties such as erosional resistance, hydraulic roughness and percentage ground cover. In this context the existing EROSION 3D soil parameter data base deducted from large scale rainfall simulations in Germany is verified for application in the study area, using small scale disc type rainfall simulator with an additional runoff reflux approach. Thus it's possible to enlarge virtual plot length up to at least 10 m. Experimental plots are located in Cuiabá region of central Mato Grosso in order to cover the most relevant land use variants and tillage practices in the region. Results show that derived model parameters are highly influenced by soil management. This indicates a high importance of tillage impact on resistance to erosion, mulch cover and TOC. The measured parameter ranges can generally be confirmed by the existing data base, which only need to be completed due to changed phenological stages in Mato Grosso compared to German conditions.

Soil properties, strontium isotopic signatures and multi-element profiles to authenticate the origin of vegetables from small-scale regions: illustration with early potatoes from southern Italy.

PubMed

Zampella, Mariavittoria; Quétel, Christophe R; Paredes, Eduardo; Goitom Asfaha, Daniel; Vingiani, Simona; Adamo, Paola

2011-10-15

We propose a method for the authentication of the origin of vegetables grown under similar weather conditions, in sites less than 10 km distance from the sea and distributed over a rather small scale area (58651 km(2)). We studied how the strontium (Sr) isotopic signature and selected elemental concentrations ([Mn], [Cu], [Zn], [Rb], [Sr] and [Cd]) in early potatoes from three neighbouring administrative regions in the south of Italy were related to the geological substrate (alluvial sediments, volcanic substrates and carbonate rocks) and to selected soil chemical properties influencing the bioavailability of elements in soils (pH, cation exchange capacity and total carbonate content). Through multiple-step multivariate statistics (PLS-DA) we could assign 26 potatoes (including two already commercialised samples) to their respective eight sites of production, corresponding to the first two types of geological substrates. The other 12 potatoes from four sites of production had similar characteristics in terms of the geological substrate (third type) and these soil properties could be grouped together. In this case, more discriminative parameters would be required to allow the differentiation between sites. The validation of our models included external prediction tests with data of potatoes harvested the year before and a study on the robustness of the uncertainties of the measurement results. Annual variations between multi-elemental and Sr isotopic fingerprints were observed in potatoes harvested from soils overlying carbonate rocks, stressing the importance of testing long term variations in authentication studies. Copyright © 2011 John Wiley & Sons, Ltd. and European Union [2011].

Comparison of different assimilation methodologies of groundwater levels to improve predictions of root zone soil moisture with an integrated terrestrial system model

NASA Astrophysics Data System (ADS)

Zhang, Hongjuan; Kurtz, Wolfgang; Kollet, Stefan; Vereecken, Harry; Franssen, Harrie-Jan Hendricks

2018-01-01

The linkage between root zone soil moisture and groundwater is either neglected or simplified in most land surface models. The fully-coupled subsurface-land surface model TerrSysMP including variably saturated groundwater dynamics is used in this work. We test and compare five data assimilation methodologies for assimilating groundwater level data via the ensemble Kalman filter (EnKF) to improve root zone soil moisture estimation with TerrSysMP. Groundwater level data are assimilated in the form of pressure head or soil moisture (set equal to porosity in the saturated zone) to update state vectors. In the five assimilation methodologies, the state vector contains either (i) pressure head, or (ii) log-transformed pressure head, or (iii) soil moisture, or (iv) pressure head for the saturated zone only, or (v) a combination of pressure head and soil moisture, pressure head for the saturated zone and soil moisture for the unsaturated zone. These methodologies are evaluated in synthetic experiments which are performed for different climate conditions, soil types and plant functional types to simulate various root zone soil moisture distributions and groundwater levels. The results demonstrate that EnKF cannot properly handle strongly skewed pressure distributions which are caused by extreme negative pressure heads in the unsaturated zone during dry periods. This problem can only be alleviated by methodology (iii), (iv) and (v). The last approach gives the best results and avoids unphysical updates related to strongly skewed pressure heads in the unsaturated zone. If groundwater level data are assimilated by methodology (iii), EnKF fails to update the state vector containing the soil moisture values if for (almost) all the realizations the observation does not bring significant new information. Synthetic experiments for the joint assimilation of groundwater levels and surface soil moisture support methodology (v) and show great potential for improving the representation of root zone soil moisture.

Effect of soil properties on Hydraulic characteristics under subsurface drip irrigation

NASA Astrophysics Data System (ADS)

Fan, Wangtao; Li, Gang

2018-02-01

Subsurface drip irrigation (SDI) is a technique that has a high potential in application because of its high efficiency in water-saving. The hydraulic characteristics of SDI sub-unit pipe network can be affected by soil physical properties as the emitters are buried in soils. The related research, however, is not fully explored. The laboratory tests were carried out in the present study to determine the effects of hydraulic factors including operating pressure, initial soil water content, and bulk density on flow rate and its sensitivity to each hydraulic factor for two types of SDI emitters (PLASSIM emitter and Heping emitter). For this purpose, three soils with contrasting textures (i.e., light sand, silt loam, and light clay) were repacked with two soil bulk density (1.25 and1.40 g cm-3) with two initial soil water content (12% and 18%) in plexiglass columns with 40 cm in diameter and 40 cm in height. Drip emitters were buried at depth of 20 cm to measure the flow rates under seven operating pressures (60, 100, 150, 200, 250, 300, and 370 kPa). We found that the operating pressure was the dominating factor of flow rate of the SDI emitter, and flow rate increased with the increase of operating pressure. The initial soil water content and bulk density also affected the flow rate, and their effects were the most notable in the light sand soil. The sensitivity of flow rate to each hydraulic factor was dependent on soil texture, and followed a descending order of light sand>silt loam>light clay for both types of emitters. Further, the sensitivity of flow rate to each hydraulic factor decreased with the increase of operating pressure, initial soil water content, and bulk density. This study may be used to guide the soil specific-design of SDI emitters for optimal water use and management.

Soil simulant sourcing for the ExoMars rover testbed

NASA Astrophysics Data System (ADS)

Gouache, Thibault P.; Patel, Nildeep; Brunskill, Christopher; Scott, Gregory P.; Saaj, Chakravarthini M.; Matthews, Marcus; Cui, Liang

2011-06-01

ExoMars is the European Space Agency (ESA) mission to Mars planned for launch in 2018, focusing on exobiology with the primary objective of searching for any traces of extant or extinct carbon-based micro-organisms. The on-surface mission is performed by a near-autonomous mobile robotic vehicle (also referred to as the rover) with a mission design life of 180 sols (Patel et al., 2010). In order to obtain useful data on the tractive performance of the ExoMars rover before flight, it is necessary to perform mobility tests on representative soil simulant materials producing a Martian terrain analogue under terrestrial laboratory conditions. Three individual types of regolith shown to be found extensively on the Martian surface were identified for replication using commercially available terrestrial materials, sourced from UK sites in order to ensure easy supply and reduce lead times for delivery. These materials (also referred to as the Engineering Soil (ES-x) simulants) are: a fine dust analogue (ES-1); a fine aeolian sand analogue (ES-2); and a coarse sand analogue (ES-3). Following a detailed analysis, three fine sand regolith types were identified from commercially available products. Each material was used in its off-the-shelf state, except for ES-2, where further processing methods were used to reduce the particle size range. These materials were tested to determine their physical characteristics, including the particle size distribution, particle density, particle shape (including angularity/sphericity) and moisture content. The results are analysed to allow comparative analysis with existing soil simulants and the published results regarding in situ analysis of Martian soil on previous NASA (National Aeronautics and Space Administration) missions. The findings have shown that in some cases material properties vary significantly from the specifications provided by material suppliers. This has confirmed the need for laboratory testing to determine the actual parameters to prove that standard geotechnical processes are indeed suitable. The outcomes have allowed the confirmation of each simulant material as suitable for replicating their respective regolith types.

Assessing Vulnerability of Lake Erie Landscapes to Soil Erosion: Modelled and Measured Approaches

NASA Astrophysics Data System (ADS)

Joosse, P.; Laamrani, A.; Feisthauer, N.; Li, S.

2017-12-01

Loss of soil from agricultural landscapes to Lake Erie via water erosion is a key transport mechanism for phosphorus bound to soil particles. Agriculture is the dominant land use in the Canadian side of the Lake Erie basin with approximately 75% of the 2.3 million hectares under crop or livestock production. The variable geography and diversity of agricultural production systems and management practices makes estimating risk of soil erosion from agricultural landscapes in the Canadian Lake Erie basin challenging. Risk of soil erosion depends on a combination of factors including the extent to which soil remains bare, which differs with crop type and management. Two different approaches of estimating the vulnerability of landscapes to soil erosion will be compared among Soil Landscapes of Canada in the Lake Erie basin: a modelling approach incorporating farm census and soil survey data, represented by the 2011 Agriculture and Agri-Food Canada Agri-Environmental Indicator for Soil Erosion Risk; and, a measured approach using remotely sensed data that quantifies the magnitude of bare and covered soil across the basin. Results from both approaches will be compared by scaling the national level (1:1 million) Soil Erosion Risk Indicator and the remotely sensed data (30x30 m resolution) to the quaternary watershed level.

Effect of tillage and crop residue on soil temperature following planting for a Black soil in Northeast China.

PubMed

Shen, Yan; McLaughlin, Neil; Zhang, Xiaoping; Xu, Minggang; Liang, Aizhen

2018-03-14

Crop residue return is imperative to maintain soil health and productivity but some farmers resist adopting conservation tillage systems with residue return fearing reduced soil temperature following planting and crop yield. Soil temperatures were measured at 10 cm depth for one month following planting from 2004 to 2007 in a field experiment in Northeast China. Tillage treatments included mouldboard plough (MP), no till (NT), and ridge till (RT) with maize (Zea mays L.) and soybean (Glycine max Merr.) crops. Tillage had significant effects on soil temperature in 10 of 15 weekly periods. Weekly average NT soil temperature was 0-1.5 °C lower than MP, but the difference was significant (P < 0.05) only in 2007 when residue was not returned in MP the previous autumn. RT showed no clear advantage over NT in increasing soil temperature. Higher residue coverage caused lower soil temperature; the effect was greater for maize than soybean residue. Residue type had significant effect on soil temperature in 9 of 15 weekly periods with 0-1.9 °C lower soil temperature under maize than soybean residue. Both tillage and residue had small but inconsistent effect on soil temperature following planting in Northeast China representative of a cool to temperate zone.

An efficient and reproducible method for improving growth of a soil alga (Chlorococcum infusionum) for toxicity assays.

PubMed

Nam, Sun-Hwa; An, Youn-Joo

2015-12-01

This study evaluated five methods of soil inoculation using the soil alga Chlorococcum infusionum to determine the most efficient and reproducible method for promoting the growth of soil algae for toxicity testing. The five techniques included application of C. infusionum in a circle on top of the soil, to a central spot on top of the soil, to a central spot in the subsoil, to one side on top of the soil, and application divided between a circle and a central spot on top of the soil. Of these, the first method generated the greatest amount of chlorophyll fluorescence and was the method with the best reproducibility. We evaluated the applicability of this method in an assessment of the toxicity of copper and nickel to C. infusionum in two representative standard soils. Copper (20-75 mg/kg for OECD soil and 20-60 mg/kg Lufa 2.2 soil) and nickel (400-500 mg/kg for OECD soil and 60-100 mg/kg Lufa 2.2 soil) reduced the chlorophyll fluorescence of C. infusionum when the inoculation was delivered in a circle on top of both soil types. To our knowledge, this is the first study to assess the suitability of different soil algal inoculation methods for terrestrial toxicity testing. Copyright © 2015 Elsevier B.V. All rights reserved.

Quantifying the contribution of riparian soils to the provision of ecosystem services.

PubMed

de Sosa, Laura L; Glanville, Helen C; Marshall, Miles R; Prysor Williams, A; Jones, Davey L

2018-05-15

Riparian areas, the interface between land and freshwater ecosystems, are considered to play a pivotal role in the supply of regulating, provisioning, cultural and supporting services. Most previous studies, however, have tended to focus on intensive agricultural systems and only on a single ecosystem function. Here, we present the first study which attempts to assess a wide range of ecological processes involved in the provision of the ecosystem service of water quality regulation across a diverse range of riparian typologies. Specifically, we focus on 1) evaluating the spatial variation in riparian soils properties with respect to distance with the river and soil depth in contrasting habitat types; 2) gaining further insights into the underlying mechanisms of pollutant removal (i.e. pesticide sorption/degradation, denitrification, etc.) by riparian soils; and 3) quantify and evaluate how riparian vegetation across different habitat types contribute to the provision of watercourse shading. All the habitats were present within a single large catchment and included: (i) improved grassland, (ii) unimproved (semi-natural) grassland, (iii) broadleaf woodland, (iv) coniferous woodland, and (iv) mountain, heath and bog. Taking all the data together, the riparian soils could be statistically separated by habitat type, providing evidence that they deliver ecosystem services to differing extents. Overall, however, our findings seem to contradict the general assumption that soils in riparian area are different from neighbouring (non-riparian) areas and that they possess extra functionality in terms of ecosystem service provision. Watercourse shading was highly habitat specific and was maximal in forests (ca. 52% shade cover) in comparison to the other habitat types (7-17%). Our data suggest that the functioning of riparian areas in less intensive agricultural areas, such as those studied here, may be broadly predicted from the surrounding land use, however, further research is required to critically test this across a wider range of ecosystems. Copyright © 2017 Elsevier B.V. All rights reserved.

The effects of salinity in the soil water balance: A Budyko's approach

NASA Astrophysics Data System (ADS)

Perri, S.; Viola, F.; Molini, A.

2017-12-01

Soil degradation and water scarcity pose important constraints on productivity and development of arid and semi-arid countries. Among the main causes of loss of soil fertility, aridification and soil salinization are deeply connected threats enhanced by climate change. Assessing water availability is fundamental for a large number of applications especially in arid regions. An approach often adopted to estimate the long-term rainfall partitioning into evapotranspiration and runoff is the Budyko's curve. However, the classical Budyko framework might not be able to properly reproduce the water balance in salt affected basins, especially under elevated soil salinization conditions. Salinity is a limiting factor for plant transpiration (as well as growth) affecting both short and long term soil moisture dynamics and ultimately the hydrologic balance. Soluble salts cause a reduction of soil water potential similar to the one arising from droughts, although plant adaptations to soil salinity show extremely different traits and can vary from species to species. In a similar context, the salt-tolerance plants are expected to control the amount of soil moisture lost to transpiration in saline soils, also because salinity reduces evaporation. We propose a simple framework to include the effects of salinization on the surface energy and water balance within a simple Budyko approach. By introducing the effects of salinity in the stochastic water balance we are able to include the influence of vegetation type (i.e. in terms of salt-tolerance) on evapotranspiration-runoff partitioning under different climatic conditions. The water balance components are thus compared to data obtained from arid salt-affected regions.

Remote sensing as a tool for estimating soil erosion potential

NASA Technical Reports Server (NTRS)

Morris-Jones, D. R.; Morgan, K. M.; Kiefer, R. W.

1979-01-01

The Universal Soil Loss Equation is a frequently used methodology for estimating soil erosion potential. The Universal Soil Loss Equation requires a variety of types of geographic information (e.g. topographic slope, soil erodibility, land use, crop type, and soil conservation practice) in order to function. This information is traditionally gathered from topographic maps, soil surveys, field surveys, and interviews with farmers. Remote sensing data sources and interpretation techniques provide an alternative method for collecting information regarding land use, crop type, and soil conservation practice. Airphoto interpretation techniques and medium altitude, multi-date color and color infrared positive transparencies (70mm) were utilized in this study to determine their effectiveness for gathering the desired land use/land cover data. Successful results were obtained within the test site, a 6136 hectare watershed in Dane County, Wisconsin.

Analysis of volatile organic compound from Elaeis guineensis inflorescences planted on different soil types in Malaysia

NASA Astrophysics Data System (ADS)

Muhamad Fahmi, M. H.; Ahmad Bukhary, A. K.; Norma, H.; Idris, A. B.

2016-11-01

The main attractant compound for Eleidobius kamerunicus to male spikelet Elaeis guineensis (oil palm) were determined by analyzing volatile organic compound extracted from E. guineenses inflorescences planted on different soil types namely peat soil, clay soil and sandy soil. Anthesizing male oil palm inflorescences were randomly choosen from palm aged between 4-5 years old age. Extraction of the volatiles from the oil palm inflorescences were performed by Accelerated Solvent Extraction method (ASE). The extracted volatile compound were determined by using gas chromatography-mass spectrometry. Out of ten identified compound, estragole was found to be a major compound in sandy soil (37.49%), clay soil (30.71%) and peat soil (27.79%). Other compound such as 9,12-octadecadieonic acid and n-hexadecanoic acid were found as major compound in peat soil (27.18%) and (7.45%); sandy soil (14.15 %) and (9.31%); and clay soil (30.23%) and (4.99%). This study shows that estragole was the predominant volatile compound detected in oil palm inflorescences with highly concentrated in palm planted in sandy soil type.

Degradation of methyl bromide and methyl chloride in soil microcosms: Use of stable C isotope fractionation and stable isotope probing to identify reactions and the responsible microorganisms

USGS Publications Warehouse

Miller, L.G.; Warner, K.L.; Baesman, S.M.; Oremland, R.S.; McDonald, I.R.; Radajewski, S.; Murrell, J.C.

2004-01-01

Bacteria in soil microcosm experiments oxidized elevated levels of methyl chloride (MeCl) and methyl bromide (MeBr), the former compound more rapidly than the latter. MeBr was also removed by chemical reactions while MeCl was not. Chemical degradation dominated the early removal of MeBr and accounted for more than half of its total loss. Fractionation of stable carbon isotopes during chemical degradation of MeBr resulted in a kinetic isotope effect (KIE) of 59 ?? 7???. Soil bacterial oxidation dominated the later removal of MeBr and MeCl and was characterized by different KIEs for each compound. The KIE for MeBr oxidation was 69 ?? 9??? and the KIE for MeCl oxidation was 49 ?? 3???. Stable isotope probing revealed that different populations of soil bacteria assimilated added 13C-labeled MeBr and MeCl. The identity of the active MeBr and MeCl degrading bacteria in soil was determined by analysis of 16S rRNA gene sequences amplified from 13C-DNA fractions, which identified a number of sequences from organisms not previously thought to be involved in methyl halide degradation. These included Burkholderia , the major clone type in the 13C-MeBr fraction, and Rhodobacter, Lysobacter and Nocardioides the major clone types in the 13C-MeCl fraction. None of the 16S rRNA gene sequences for methyl halide oxidizing bacteria currently in culture (including Aminobacter strain IMB-1 isolated from fumigated soil) were identified. Functional gene clone types closely related to Aminobacter spp. were identified in libraries containing the sequences for the cmuA gene, which codes for the enzyme known to catalyze the initial step in the oxidation of MeBr and MeCl. The cmuA gene was limited to members of the alpha-Proteobacteria whereas the greater diversity demonstrated by the 16S rRNA gene may indicate that other enzymes catalyze methyl halide oxidation in different groups of bacteria. Copyright ?? 2004 Elsevier Ltd.

Degradation of methyl bromide and methyl chloride in soil microcosms: Use of stable C isotope fractionation and stable isotope probing to identify reactions and the responsible microorganisms

NASA Astrophysics Data System (ADS)

Miller, Laurence G.; Warner, Karen L.; Baesman, Shaun M.; Oremland, Ronald S.; McDonald, Ian R.; Radajewski, Stefan; Murrell, J. Colin

2004-08-01

Bacteria in soil microcosm experiments oxidized elevated levels of methyl chloride (MeCl) and methyl bromide (MeBr), the former compound more rapidly than the latter. MeBr was also removed by chemical reactions while MeCl was not. Chemical degradation dominated the early removal of MeBr and accounted for more than half of its total loss. Fractionation of stable carbon isotopes during chemical degradation of MeBr resulted in a kinetic isotope effect (KIE) of 59 ± 7‰. Soil bacterial oxidation dominated the later removal of MeBr and MeCl and was characterized by different KIEs for each compound. The KIE for MeBr oxidation was 69 ± 9‰ and the KIE for MeCl oxidation was 49 ± 3‰. Stable isotope probing revealed that different populations of soil bacteria assimilated added 13C-labeled MeBr and MeCl. The identity of the active MeBr and MeCl degrading bacteria in soil was determined by analysis of 16S rRNA gene sequences amplified from 13C-DNA fractions, which identified a number of sequences from organisms not previously thought to be involved in methyl halide degradation. These included Burkholderia, the major clone type in the 13C-MeBr fraction, and Rhodobacter, Lysobacter and Nocardioides the major clone types in the 13C-MeCl fraction. None of the 16S rRNA gene sequences for methyl halide oxidizing bacteria currently in culture (including Aminobacter strain IMB-1 isolated from fumigated soil) were identified. Functional gene clone types closely related to Aminobacter spp. were identified in libraries containing the sequences for the cmuA gene, which codes for the enzyme known to catalyze the initial step in the oxidation of MeBr and MeCl. The cmuA gene was limited to members of the alpha-Proteobacteria whereas the greater diversity demonstrated by the 16S rRNA gene may indicate that other enzymes catalyze methyl halide oxidation in different groups of bacteria.

Leaching characteristics of toxic constituents from coal fly ash mixed soils under the influence of pH.

PubMed

Komonweeraket, Kanokwan; Cetin, Bora; Benson, Craig H; Aydilek, Ahmet H; Edil, Tuncer B

2015-04-01

Leaching behaviors of Arsenic (As), Barium (Ba), Calcium (Ca), Cadmium (Cd), Magnesium (Mg), Selenium (Se), and Strontium (Sr) from soil alone, coal fly ash alone, and soil-coal fly ash mixtures, were studied at a pH range of 2-14 via pH-dependent leaching tests. Seven different types of soils and coal fly ashes were tested. Results of this study indicated that Ca, Cd, Mg, and Sr showed cationic leaching pattern while As and Se generally follows an oxyanionic leaching pattern. On the other hand, leaching of Ba presented amphoteric-like leaching pattern but less pH-dependent. In spite of different types and composition of soil and coal fly ash investigated, the study reveals the similarity in leaching behavior as a function of pH for a given element from soil, coal fly ash, and soil-coal fly ash mixtures. The similarity is most likely due to similar controlling mechanisms (e.g., solubility, sorption, and solid-solution formation) and similar controlling factors (e.g., leachate pH and redox conditions). This offers the opportunity to transfer knowledge of coal fly ash that has been extensively characterized and studied to soil stabilized with coal fly ash. It is speculated that unburned carbon in off-specification coal fly ashes may provide sorption sites for Cd resulting in a reduction in concentration of these elements in leachate from soil-coal fly ash mixture. Class C fly ash provides sufficient CaO to initiate the pozzolanic reaction yielding hydrated cement products that oxyanions, including As and Se, can be incorporated into. Copyright © 2014 Elsevier Ltd. All rights reserved.

Perfluorooctane sulfonate in surface soils: Effects on reproduction in the collembolan, Folsomia candida, and the oribatid mite, Oppia nitens.

PubMed

Princz, Juliska; Jatar, Muriel; Lemieux, Heather; Scroggins, Rick

2018-06-04

Perfluorooctane sulfonate (PFOS) is a persistent organic pollutant, which has been detected at significant concentrations in soils at sites used for fire-fighting training operations. Recent ecotoxicological research has mainly focused on earthworms to assess the toxicity of PFOS in soil. However, the inclusion of other soil taxonomic groups allow for a more holistic estimate of contaminant risk, including the derivation of more comprehensive soil quality guidelines. The present study assessed the toxicity of PFOS using the collembolan, Folsomia candida, and the oribatid mite, Oppia nitens, in two types of soil: a coarse-textured sandy loam (VSL) and fine-textured clay loam (NRS). As a standard O. nitens reproduction test is being formalized, the results of the study were also used to compare sensitivity across test species. Effects were soil dependent, with test species being 2-4 times more susceptible to PFOS in VSL, relative to NRS, likely due to differences in organic matter and clay content. Oppia nitens was significantly more sensitive to PFOS, regardless of soil type, in comparison to F. candida. The IC50s for reproduction for O. nitens were 23 mg kg -1 (95% confidence interval: 17-32 mg kg -1 ) in the VSL and 95 mg kg -1 (69-134 mg kg -1 ) in the NRS, and for F. candida were 94 mg kg -1 (72-122 mg kg -1 ) in the VSL and 233 mg kg -1 (177-306 mg kg -1 ) in the NRS. The present study demonstrates the application and inclusion of the oribatid mite, O. nitens, for the risk assessment of contaminants in soil. Crown Copyright © 2018. Published by Elsevier Ltd. All rights reserved.

Soil gross nitrogen transformations in responses to land use conversion in a subtropical karst region.

PubMed

Li, Dejun; Liu, Jing; Chen, Hao; Zheng, Liang; Wang, Kelin

2018-04-15

Gross nitrogen (N) transformations can provide important information for assessing indigenous soil N supply capacity and soil nitrate leaching potential. The current study aimed to assess the variation of gross N transformations in response to conversion of maize-soybean fields to sugarcane, mulberry, and forage grass fields in a subtropical karst region of southwest China. Mature forests were included for comparison. Gross rates of N mineralization (GNM) were highest in the forests, intermediate in the maize-soybean and forage grass fields, and lowest in the sugarcane and mulberry fields, suggesting capacity of indigenous soil N supply derived from organic N mineralization was lowered after conversion to sugarcane and mulberry fields. The relative high indigenous soil N supply capacity in the maize-soybean fields was obtained at the cost of soil organic N depletion. Gross nitrification (GN) rates were highest in the forests, intermediate in the forage grass fields and lowest in the other three agricultural land use types. The nitrate retention capacity (24.1 ± 2.0% on average) was similar among the five land use types, implying that nitrate leaching potential was not changed after land use conversion. Microbial biomass N exerted significant direct effects on the rates of N mineralization, nitrification, ammonium immobilization and nitrate immobilization. Soil organic carbon, total N and exchangeable magnesium had significant indirect effects on these N transformation rates. Our findings suggest that forage grass cultivation instead of other agricultural land uses should be recommended from the perspective of increasing indigenous soil N supply while not depleting soil organic N pool. Copyright © 2018 Elsevier Ltd. All rights reserved.

Differential distribution patterns of ammonia-oxidizing archaea and bacteria in acidic soils of Nanling National Nature Reserve forests in subtropical China.

PubMed

Gan, Xian-Hua; Zhang, Fang-Qiu; Gu, Ji-Dong; Guo, Yue-Dong; Li, Zhao-Qing; Zhang, Wei-Qiang; Xu, Xiu-Yu; Zhou, Yi; Wen, Xiao-Ying; Xie, Guo-Guang; Wang, Yong-Feng

2016-02-01

In addition to ammonia-oxidizing bacteria (AOB) the more recently discovered ammonia-oxidizing archaea (AOA) can also oxidize ammonia, but little is known about AOA community structure and abundance in subtropical forest soils. In this study, both AOA and AOB were investigated with molecular techniques in eight types of forests at surface soils (0-2 cm) and deep layers (18-20 cm) in Nanling National Nature Reserve in subtropical China. The results showed that the forest soils, all acidic (pH 4.24-5.10), harbored a wide range of AOA phylotypes, including the genera Nitrosotalea, Nitrososphaera, and another 6 clusters, one of which was reported for the first time. For AOB, only members of Nitrosospira were retrieved. Moreover, the abundance of the ammonia monooxygenase gene (amoA) from AOA dominated over AOB in most soil samples (13/16). Soil depth, rather than forest type, was an important factor shaping the community structure of AOA and AOB. The distribution patterns of AOA and AOB in soil layers were reversed: AOA diversity and abundances in the deep layers were higher than those in the surface layers; on the contrary, AOB diversity and abundances in the deep layers were lower than those in the surface layers. Interestingly, the diversity of AOA was positively correlated with pH, but negatively correlated with organic carbon, total nitrogen and total phosphorus, and the abundance of AOA was negatively correlated with available phosphorus. Our results demonstrated that AOA and AOB were differentially distributed in acidic soils in subtropical forests and affected differently by soil characteristics.

Effects of vegetation type on microbial biomass carbon and nitrogen in subalpine mountain forest soils.

PubMed

Ravindran, Anita; Yang, Shang-Shyng

2015-08-01

Microbial biomass plays an important role in nutrient transformation and conservation of forest and grassland ecosystems. The objective of this study was to determine the microbial biomass among three vegetation types in subalpine mountain forest soils of Taiwan. Tatachia is a typical high-altitude subalpine temperate forest ecosystem in Taiwan with an elevation of 1800-3952 m and consists of three vegetation types: spruce, hemlock, and grassland. Three plots were selected in each vegetation type. Soil samples were collected from the organic layer, topsoil, and subsoil. Microbial biomass carbon (Cmic) was determined by the chloroform fumigation-extraction method, and microbial biomass nitrogen (Nmic) was determined from the total nitrogen (Ntot) released during fumigation-extraction. Bacteria, actinomycetes, fungi, cellulolytic microbes, phosphate-solubilizing microbes, and nitrogen-fixing microbes were also counted. The Cmic and Nmic were highest in the surface soil and declined with the soil depth. These were also highest in spruce soils, followed by in hemlock soils, and were lowest in grassland soils. Cmic and Nmic had the highest values in the spring season and the lowest values in the winter season. Cmic and Nmic had significantly positive correlations with total organic carbon (Corg) and Ntot. Contributions of Cmic and Nmic, respectively, to Corg and Ntot indicated that the microbial biomass was immobilized more in spruce and hemlock soils than in grassland soils. Microbial populations of the tested vegetation types decreased with increasing soil depth. Cmic and Nmic were high in the organic layer and decreased with the depth of layers. These values were higher for spruce and hemlock soils than for grassland soils. Positive correlations were observed between Cmic and Nmic and between Corg and Ntot. Copyright © 2014. Published by Elsevier B.V.

Organic layer serves as a hotspot of microbial activity and abundance in Arctic tundra soils.

PubMed

Lee, Seung-Hoon; Jang, Inyoung; Chae, Namyi; Choi, Taejin; Kang, Hojeong

2013-02-01

Tundra ecosystem is of importance for its high accumulation of organic carbon and vulnerability to future climate change. Microorganisms play a key role in carbon dynamics of the tundra ecosystem by mineralizing organic carbon. We assessed both ecosystem process rates and community structure of Bacteria, Archaea, and Fungi in different soil layers (surface organic layer and subsurface mineral soil) in an Arctic soil ecosystem located at Spitsbergen, Svalbard during the summer of 2008 by using biochemical and molecular analyses, such as enzymatic assay, terminal restriction fragment length polymorphism (T-RFLP), quantitative polymerase chain reaction (qPCR), and pyrosequencing. Activity of hydrolytic enzymes showed difference according to soil type. For all three microbial communities, the average gene copy number did not significantly differ between soil types. However, archaeal diversities appeared to differ according to soil type, whereas bacterial and fungal diversity indices did not show any variation. Correlation analysis between biogeochemical and microbial parameters exhibited a discriminating pattern according to microbial or soil types. Analysis of the microbial community structure showed that bacterial and archaeal communities have different profiles with unique phylotypes in terms of soil types. Water content and hydrolytic enzymes were found to be related with the structure of bacterial and archaeal communities, whereas soil organic matter (SOM) and total organic carbon (TOC) were related with bacterial communities. The overall results of this study indicate that microbial enzyme activity were generally higher in the organic layer than in mineral soils and that bacterial and archaeal communities differed between the organic layer and mineral soils in the Arctic region. Compared to mineral soil, peat-covered organic layer may represent a hotspot for secondary productivity and nutrient cycling in this ecosystem.

[Hydrological characteristics of calcareous soil with contrasting architecture on dolomite slope of Northwest Guangxi].

PubMed

Zhang, Xing; Wang, Ke Lin; Fu, Zhi Yong; Chen, Hong Song; Zhang, Wei; Shi, Zhi Hua

2017-07-18

The traditional hydrology method, stable hydrogen and oxygen isotope technology, and rainfall simulation method were combined to investigate the hydrological function of small experimental plots (2 m×1.2 m) of contrasting architecture in Northwest Guangxi dolomite area. There were four typical catenary soils along the dolomite peak-cluster slope, which were the whole-sand, up-loam and down-sand, the whole loam, up-clay and down-sand soil types, respectively. All the experimental plots generated little amounts of overland runoff and had a high surface infiltration rate, ranging from 41 to 48 mm·h -1 , and the interflow and deep percolation were the dominant hydrological progress. The interflow was classified into interflow in soil clay A and C according to soil genetic layers. For interflow in soil clay A, matrix flow was generated from the whole-sand, up-loam and down-sand, up-clay and down-sand soil types, but preferential flow dominated in the whole-loam soil type. As for interflow in soil clay C, preferential flow dominated in the whole-loam, up-clay and down-sand, up-loam and down-sand soil types. The soils were shallow yet continuously distributed along the dolomite slope. The difference of hydrological characteristics in soil types with different architectures mainly existed in the runoff generation progress of each interface underground. It proved that the a 3-D perspective was needed to study the soil hydrological functions on dolomite slope of Northwest Guangxi, and a new way paying more attention on underground hydrological progress should be explored to fully reveal the near-surface hydrological processes on karst slope.

Grassland Management and Conversion into Grassland: Effects on Soil Carbon

DOE Data Explorer

Conant, Richard T. [Natural Resource Ecology Laboratory, Colorada State University, Fort Collins, CO (USA); Paustian, Keith [Natural Resource Ecology Laboratory, Colorada State University, Fort Collins, CO (USA); Elliott, Edward T. [Natural Resource Ecology Laboratory, Colorada State University, Fort Collins, CO (USA)

2003-01-01

Grasslands are heavily relied upon for food and forage production. A key component for sustaining production in grassland ecosystems is the maintenance of soil organic matter (SOM), which can be strongly influenced by management. Many management techniques intended to increase forage production may potentially increase SOM, thus sequestering atmospheric carbon (C). Further, conversion from either cultivation or native vegetation into grassland could also sequester atmospheric carbon. We reviewed studies examining the influence of improved grassland management practices and conversion into grasslands on soil C worldwide to assess the potential for C sequestration. Results from 115 studies containing over 300 data points were analyzed. Management improvements included fertilization (39%), improved grazing management (24%), conversion from cultivation (15%) and native vegetation (15%), sowing of legumes (4%) and grasses (2%), earthworm introduction (1%), and irrigation (1%). Soil C content and concentration increased with improved management in 74% of the studies, and mean soil C increased with all types of improvement. Carbon sequestration rates were highest during the first 40 y after treatments began and tended to be greatest in the top 10 cm of soil. Impacts were greater in woodland and grassland biomes than in forest, desert, rain forest, or shrubland biomes. Conversion from cultivation, the introduction of earthworms, and irrigation resulted in the largest increases. Rates of C sequestration by type of improvement ranged from 0.11 to 3.04 Mg C · ha^–1 y^–1, with a mean of 0.54 Mg C · ha ^–1 · y^–1, and were highly influenced by biome type and climate. We conclude that grasslands can act as a significant carbon sink with the implementation of improved management.

The methane sink associated to soils of natural and agricultural ecosystems in Italy.

PubMed

Castaldi, Simona; Costantini, Massimo; Cenciarelli, Pietro; Ciccioli, Paolo; Valentini, Riccardo

2007-01-01

In the present work, the CH4 sink associated to Italian soils was calculated by using a process-based model controlled by gas diffusivity and microbial activity, which was run by using a raster-based geographical information system. Georeferenced data included land cover CLC2000, soil properties from the European Soil Database, climatic data from the MARS-STAT database, plus several derived soils properties based on published algorithms applied to the above mentioned databases. Overall CH4 consumption from natural and agricultural sources accounted for a total of 43.3 Gg CH4 yr(-1), with 28.1 Gg CH4 yr(-1) removed in natural ecosystems and 15.1 Gg CH4 yr(-1) in agricultural ecosystems. The highest CH4 uptake rates were obtained for natural areas of Southern Apennines and islands of Sardinia and Sicily, and were mainly associated to areas covered by sclerophyllous vegetation (259.7+/-30.2 mg CH4 m(-2) yr(-1)) and broad-leaved forest (237.5 mg CH4 m(-2) yr(-1)). In terms of total sink strength broad-leaved forests were the dominant ecosystem. The overall contribution of each ecosystem type to the whole CH4 sink depended on the total area covered by the specific ecosystem and on its exact geographic distribution. The latter determines the type of climate present in the area and the dominant soil type, both factors which showed to have a strong influence on CH4 uptake rates. The aggregated CH4 sink, calculated for natural ecosystems present in the Italian region, is significantly higher than previously reported estimates, which were extrapolated from fluxes measured in other temperate ecosystems.

Statistical process control applied to mechanized peanut sowing as a function of soil texture.

PubMed

Zerbato, Cristiano; Furlani, Carlos Eduardo Angeli; Ormond, Antonio Tassio Santana; Gírio, Lucas Augusto da Silva; Carneiro, Franciele Morlin; da Silva, Rouverson Pereira

2017-01-01

The successful establishment of agricultural crops depends on sowing quality, machinery performance, soil type and conditions, among other factors. This study evaluates the operational quality of mechanized peanut sowing in three soil types (sand, silt, and clay) with variable moisture contents. The experiment was conducted in three locations in the state of São Paulo, Brazil. The track-sampling scheme was used for 80 sampling locations of each soil type. Descriptive statistics and statistical process control (SPC) were used to evaluate the quality indicators of mechanized peanut sowing. The variables had normal distributions and were stable from the viewpoint of SPC. The best performance for peanut sowing density, normal spacing, and the initial seedling growing stand was found for clayey soil followed by sandy soil and then silty soil. Sandy or clayey soils displayed similar results regarding sowing depth, which was deeper than in the silty soil. Overall, the texture and the moisture of clayey soil provided the best operational performance for mechanized peanut sowing.

[Effects of bio-crust on soil microbial biomass and enzyme activities in copper mine tailings].

PubMed

Chen, Zheng; Yang, Gui-de; Sun, Qing-ye

2009-09-01

Bio-crust is the initial stage of natural primary succession in copper mine tailings. With the Yangshanchong and Tongguanshan copper mine tailings in Tongling City of Anhui Province as test objects, this paper studied the soil microbial biomass C and N and the activities of dehydrogenase, catalase, alkaline phosphatase, and urease under different types of bio-crust. The bio-crusts improved the soil microbial biomass and enzyme activities in the upper layer of the tailings markedly. Algal crust had the best effect in improving soil microbial biomass C and N, followed by moss-algal crust, and moss crust. Soil microflora also varied with the type of bio-crust. No'significant difference was observed in the soil enzyme activities under the three types of bio-crust. Soil alkaline phosphatase activity was significantly positively correlated with soil microbial biomass and dehydrogenase and urease activities, but negatively correlated with soil pH. In addition, moss rhizoid could markedly enhance the soil microbial biomass and enzyme activities in moss crust rhizoid.

Statistical process control applied to mechanized peanut sowing as a function of soil texture

PubMed Central

Furlani, Carlos Eduardo Angeli; da Silva, Rouverson Pereira

2017-01-01

The successful establishment of agricultural crops depends on sowing quality, machinery performance, soil type and conditions, among other factors. This study evaluates the operational quality of mechanized peanut sowing in three soil types (sand, silt, and clay) with variable moisture contents. The experiment was conducted in three locations in the state of São Paulo, Brazil. The track-sampling scheme was used for 80 sampling locations of each soil type. Descriptive statistics and statistical process control (SPC) were used to evaluate the quality indicators of mechanized peanut sowing. The variables had normal distributions and were stable from the viewpoint of SPC. The best performance for peanut sowing density, normal spacing, and the initial seedling growing stand was found for clayey soil followed by sandy soil and then silty soil. Sandy or clayey soils displayed similar results regarding sowing depth, which was deeper than in the silty soil. Overall, the texture and the moisture of clayey soil provided the best operational performance for mechanized peanut sowing. PMID:28742095

Efficient use of animal manure on cropland--economic analysis.

PubMed

Araji, A A; Abdo, Z O; Joyce, P

2001-09-01

Manure contains all the macro- and microelements needed for plant growth; however, it represents one of the most underutilized resources in the US. The major problem with the use of manure on cropland is the direct effect of its composition on application cost. This cost is a function of the mineralization process of organic matter. The mineralization process is influenced by the properties of the manure, properties of the soil, moisture, and temperature. This study evaluates the simultaneous effect of these variables on the optimal use of manure on cropland. The results show that the properties of manure and soil significantly affect the mineralization of organic nitrogen and thus the optimal quantity of manure required to satisfy the nutrient requirement of crops in a given rotation system. Manure application costs range from a low of 18% of the cost of commercial fertilizer for chicken manure applied to one type of soil, to a high of 125% of the cost of commercial fertilizer for cow manure applied to another type of soil. The maximum distance to transfer manure to the field, that will equate its application cost to the cost of commercial fertilizer, ranges from a high of 35 km (22 miles) for chicken manure applied to one type of soil, to a low of 1 km (0.62 miles) for cow manure applied to another type of soil. For rotation system 2, manure application costs range from a low of 37% of the cost of commercial fertilizer for chicken manure applied to one type of soil, to a high of 136% of the cost of commercial fertilizer for cow manure applied to another type of soil. The maximum distance to transfer manure to the field, that will equate its cost to the cost of commercial fertilizer, ranges from a high of 20 km (12.5 miles) for chicken manure applied to one type of soil, to a low of 0 km (0 miles) for cow manure applied to another type of soil.

Soybean canopy reflectance as influenced by cultural practices. [West Lafayette, Indiana

NASA Technical Reports Server (NTRS)

Bauer, M. E. (Principal Investigator); Kollenkark, J. C.; Daughtry, C. S. T.

1981-01-01

Experiments were conducted at West Lafayette, Indiana in 1978 and 1979 to study the reflectance factor of soybean canopies as affected by differences in row width, population, planting date, cultivar and soil type. Reflectance factor data were acquired throughout the growing season with a LANDSAT-band radiometer. Agronomic data included plant height, leaf area index, development stage, total fresh and dry biomass, percent soil cover, and grain yield. The results indicate that row width, planting date, and cultivar influence the percent soil cover, leaf area index, and biomass present, which are in turn related to the multispectral reflectance. Additionally, the reflectance data were quite sensitive to the onset of senescence. Soil color and moisture were found to be important factors influencing the reflectance in single LANDSAT bands, but the near infrared/red reflectance ratio and the greeness transformation were less sensitive than the single bands to the soil background present.

Estimating Soil Organic Carbon Stocks and Spatial Patterns with Statistical and GIS-Based Methods

PubMed Central

Zhi, Junjun; Jing, Changwei; Lin, Shengpan; Zhang, Cao; Liu, Qiankun; DeGloria, Stephen D.; Wu, Jiaping

2014-01-01

Accurately quantifying soil organic carbon (SOC) is considered fundamental to studying soil quality, modeling the global carbon cycle, and assessing global climate change. This study evaluated the uncertainties caused by up-scaling of soil properties from the county scale to the provincial scale and from lower-level classification of Soil Species to Soil Group, using four methods: the mean, median, Soil Profile Statistics (SPS), and pedological professional knowledge based (PKB) methods. For the SPS method, SOC stock is calculated at the county scale by multiplying the mean SOC density value of each soil type in a county by its corresponding area. For the mean or median method, SOC density value of each soil type is calculated using provincial arithmetic mean or median. For the PKB method, SOC density value of each soil type is calculated at the county scale considering soil parent materials and spatial locations of all soil profiles. A newly constructed 1∶50,000 soil survey geographic database of Zhejiang Province, China, was used for evaluation. Results indicated that with soil classification levels up-scaling from Soil Species to Soil Group, the variation of estimated SOC stocks among different soil classification levels was obviously lower than that among different methods. The difference in the estimated SOC stocks among the four methods was lowest at the Soil Species level. The differences in SOC stocks among the mean, median, and PKB methods for different Soil Groups resulted from the differences in the procedure of aggregating soil profile properties to represent the attributes of one soil type. Compared with the other three estimation methods (i.e., the SPS, mean and median methods), the PKB method holds significant promise for characterizing spatial differences in SOC distribution because spatial locations of all soil profiles are considered during the aggregation procedure. PMID:24840890

[Fine root biomass and production of four vegetation types in Loess Plateau, China].

PubMed

Deng, Qiang; Li, Ting; Yuan, Zhi-You; Jiao, Feng

2014-11-01

Fine roots (≤ 2 mm) play a major role in biogeochemical cycling in ecosystems. By the methods of soil cores and ingrowth soil cores, we studied the biomass and annual production of fine roots in 0-40 cm soil layers of four main vegetation types, i. e. , Robinia pseudoacacia plantation, deciduous shrubs, abandoned grassland, and Artemisia desertorum community in Loess Plateau, China. The spatial patterns of fine root biomass and production were negatively associated with latitudes. The fine root biomass in the 0-40 cm soil layer was in the order of deciduous shrubs (220 g · m(-2)), R. pseudoacacia plantation (163 g · m(-2)), abandoned grassland (162 g · m(-2)) and A. desertorum community (79 g · m(-2)). The proportion of ≤ 1 mm fine root biomass (74.1%) in the 0-40 cm soil layer of abandoned grassland was significantly higher than those in the other three vegetation types. The fine root biomass of the four vegetation types was mainly distributed in the 0-10 cm soil layer and decreased with soil depth. The proportion of fine root biomass (44.1%) in the 0-10 cm soil layer of abandoned grassland was significantly higher than those in other three vegetation types. The fine root productions of four vegetation types were in the order of abandoned grassland (315 g · m(-2) · a(-1)) > deciduous shrubs (249 g · m(-2) a(-1)) > R. pseudoacacia plantation (219 g · m(-2) · a(-1)) > A. desertorum community (115 g · m(-2) · a(-1)), and mainly concentrated in the 0-10 cm top soil layer and decreased with the soil depth. The proportion of the annual production (40.4%) in the 0-10 cm soil layer was the highest in abandoned grassland. Fine roots of abandoned grassland turned over faster than those from the other three vegetation types.

Including spatial data in nutrient balance modelling on dairy farms

NASA Astrophysics Data System (ADS)

van Leeuwen, Maricke; van Middelaar, Corina; Stoof, Cathelijne; Oenema, Jouke; Stoorvogel, Jetse; de Boer, Imke

2017-04-01

The Annual Nutrient Cycle Assessment (ANCA) calculates the nitrogen (N) and phosphorus (P) balance at a dairy farm, while taking into account the subsequent nutrient cycles of the herd, manure, soil and crop components. Since January 2016, Dutch dairy farmers are required to use ANCA in order to increase understanding of nutrient flows and to minimize nutrient losses to the environment. A nutrient balance calculates the difference between nutrient inputs and outputs. Nutrients enter the farm via purchased feed, fertilizers, deposition and fixation by legumes (nitrogen), and leave the farm via milk, livestock, manure, and roughages. A positive balance indicates to which extent N and/or P are lost to the environment via gaseous emissions (N), leaching, run-off and accumulation in soil. A negative balance indicates that N and/or P are depleted from soil. ANCA was designed to calculate average nutrient flows on farm level (for the herd, manure, soil and crop components). ANCA was not designed to perform calculations of nutrient flows at the field level, as it uses averaged nutrient inputs and outputs across all fields, and it does not include field specific soil characteristics. Land management decisions, however, such as the level of N and P application, are typically taken at the field level given the specific crop and soil characteristics. Therefore the information that ANCA provides is likely not sufficient to support farmers' decisions on land management to minimize nutrient losses to the environment. This is particularly a problem when land management and soils vary between fields. For an accurate estimate of nutrient flows in a given farming system that can be used to optimize land management, the spatial scale of nutrient inputs and outputs (and thus the effect of land management and soil variation) could be essential. Our aim was to determine the effect of the spatial scale of nutrient inputs and outputs on modelled nutrient flows and nutrient use efficiencies at Dutch dairy farms. We selected two dairy farms located on cover sands in the Netherlands. One farm was located on relatively homogeneous soil type, and one on many different soil types within the sandy soils. A full year of data of N and P inputs and outputs on farm and field level were provided by the farmers, including field level yields, yield composition, manure composition, degree of grazing and degree of mowing. Soil heterogeneity was defined as the number of soil units within the farm corrected for surface area, and quantified from the Dutch 1:50.000 soil map. N and P balances at farm and field level were determined, as well as differences in nutrient use efficiency, leaching, and N emission. We will present the effect of the spatial scale on nutrient balance analysis and discuss to which degree any differences are caused by within-farm land management and soil variation. This study highlights to which extent within-farm land management and soil variation should be taken into account when modelling nutrient flows and nutrient use efficiencies at farm level, to contribute to field-based decision making for improved land management.

Dynamic arsenic aging processes and their mechanisms in nine types of Chinese soils.

PubMed

Wang, Yanan; Zeng, Xibai; Lu, Yahai; Bai, Lingyu; Su, Shiming; Wu, Cuixia

2017-11-01

Although specific soil properties controlling the arsenic (As) aging process have been studied extensively, few investigations have attempted to determine how soil types influence As bioavailability and fractionations in soils. Nine types of soil were selected from typical grain producing areas in China, and the bioavailability and fractionations of As during aging were measured. Results showed that available As in all soils rapidly decreased in the first 30 days and slowly declined thereafter. In spiked soils, As easily became less available and less toxic in low pH soils compared to high pH soils, demonstrating the importance of soil pH on As availability. Results from fitting kinetic equations revealed that the pseudo-second-order model described the As aging processes well in all soils (R 2  = 0.945-0.999, P < 0.01, SE = 0.09-4.25), implying that the mechanism for As aging combined adsorption, external diffusion, and internal diffusion. Fe oxides were more important than Al oxides for determining the As aging rate (|k|). Based on these results, we are the first to propose the approximate aging equilibrium time (T) for As, which was mainly influenced by soil clay content. The shortest time for approximate stabilization of As aging was 28 d in latosol soils (LS), while the longest approximate equilibrium time was 169 d in cinnamon soils (CS). Individual soil properties controlling the variation in different As fractionations further confirmed that the influences of soil types on As aging were the result of the combined effects of soil properties and a time-consuming redistribution process. Copyright © 2017 Elsevier Ltd. All rights reserved.

Land Surface Modeling and Data Assimilation to Support Physical Precipitation Retrievals for GPM

NASA Technical Reports Server (NTRS)

Peters-Lidard, Christa D.; Tian. Yudong; Kumar, Sujay; Geiger, James; Choudhury, Bhaskar

2010-01-01

Objective: The objective of this proposal is to provide a routine land surface modeling and data assimilation capability for GPM in order to provide global land surface states that are necessary to support physical precipitation retrieval algorithms over land. It is well-known that surface emission, particularly over the range of frequencies to be included in GPM, is sensitive to land surface states, including soil properties, vegetation type and greenness, soil moisture, surface temperature, and snow cover, density, and grain size. Therefore, providing a robust capability to routinely provide these critical land states is essential to support GPM-era physical retrieval algorithms over land.

Impacts of different types of measurements on estimating unsaturated flow parameters

NASA Astrophysics Data System (ADS)

Shi, Liangsheng; Song, Xuehang; Tong, Juxiu; Zhu, Yan; Zhang, Qiuru

2015-05-01

This paper assesses the value of different types of measurements for estimating soil hydraulic parameters. A numerical method based on ensemble Kalman filter (EnKF) is presented to solely or jointly assimilate point-scale soil water head data, point-scale soil water content data, surface soil water content data and groundwater level data. This study investigates the performance of EnKF under different types of data, the potential worth contained in these data, and the factors that may affect estimation accuracy. Results show that for all types of data, smaller measurements errors lead to faster convergence to the true values. Higher accuracy measurements are required to improve the parameter estimation if a large number of unknown parameters need to be identified simultaneously. The data worth implied by the surface soil water content data and groundwater level data is prone to corruption by a deviated initial guess. Surface soil moisture data are capable of identifying soil hydraulic parameters for the top layers, but exert less or no influence on deeper layers especially when estimating multiple parameters simultaneously. Groundwater level is one type of valuable information to infer the soil hydraulic parameters. However, based on the approach used in this study, the estimates from groundwater level data may suffer severe degradation if a large number of parameters must be identified. Combined use of two or more types of data is helpful to improve the parameter estimation.

Impacts of Different Types of Measurements on Estimating Unsaturatedflow Parameters

NASA Astrophysics Data System (ADS)

Shi, L.

2015-12-01

This study evaluates the value of different types of measurements for estimating soil hydraulic parameters. A numerical method based on ensemble Kalman filter (EnKF) is presented to solely or jointly assimilate point-scale soil water head data, point-scale soil water content data, surface soil water content data and groundwater level data. This study investigates the performance of EnKF under different types of data, the potential worth contained in these data, and the factors that may affect estimation accuracy. Results show that for all types of data, smaller measurements errors lead to faster convergence to the true values. Higher accuracy measurements are required to improve the parameter estimation if a large number of unknown parameters need to be identified simultaneously. The data worth implied by the surface soil water content data and groundwater level data is prone to corruption by a deviated initial guess. Surface soil moisture data are capable of identifying soil hydraulic parameters for the top layers, but exert less or no influence on deeper layers especially when estimating multiple parameters simultaneously. Groundwater level is one type of valuable information to infer the soil hydraulic parameters. However, based on the approach used in this study, the estimates from groundwater level data may suffer severe degradation if a large number of parameters must be identified. Combined use of two or more types of data is helpful to improve the parameter estimation.

Degradation of organic pollutants in Mediterranean forest soils amended with sewage sludge.

PubMed

Francisca Gomez-Rico, M; Font, Rafael; Vera, Jose; Fuentes, David; Disante, Karen; Cortina, Jordi

2008-05-01

The degradation of two groups of organic pollutants in three different Mediterranean forest soils amended with sewage sludge was studied for nine months. The sewage sludge produced by a domestic water treatment plant was applied to soils developed from limestone, marl and sandstone, showing contrasting alkalinity and texture. The compounds analysed were: linear alkylbenzene sulphonates (LAS) with a 10-13 carbon alkylic chain, and nonylphenolic compounds, including nonylphenol (NP) and nonylphenol ethoxylates with one and two ethoxy groups (NP1EO+NP2EO). These compounds were studied because they frequently exceed the limits proposed for sludge application to land in Europe. After nine months, LAS decomposition was 86-96%, and NP+NP1EO+NP2EO decomposition was 61-84%, which can be considered high. Temporal trends in LAS and NP+NP1EO+NP2EO decomposition were similar, and the concentrations of both types of compounds were highly correlated. The decomposition rates were higher in the period of 6-9 months (summer period) than in the period 0-6 months (winter+spring period) for total LAS and NP+NP1EO+NP2EO. Differences in decay rates with regard to soil type were not significant. The average values of decay rates found are similar to those observed in agricultural soils.

The Effects of Rain Garden Size on Hydrological Performance

EPA Science Inventory

Bioretention systems are vegetated depressions designed to accept stormwater runoff from impervious surfaces. Manuals and guidance documents recommend sizing bioretention cells anywhere from 3% to 43% of their associated drainage areas, based on factors including soil type, slop...

Microgravity

NASA Image and Video Library

2001-01-24

Interior of a Spacehab module showing the type of rack mounting that will be used, and crew working space that will be available, on the STS-107 Research 1 mission in 2002. Experiments plarned for the mission include soil mechanics, combustion physics, and cell science.

The Impact of Environmental Factors on the Amount of Nitrates and Nitrites in Different Types of Soils and Ways of Their Utilization

NASA Astrophysics Data System (ADS)

Bachvarova, Darina; Rafi, Renay; Doichinov, Aleksandar

2017-03-01

Despite the last decade considerable advances in the study of nitrate and nitrite pollution of soil, there are still some gaps in research related to neglecting or ignoring the role of soil in the food chain and its effects on upper trophic units. The article presents the results of a study on the impact of air and soil humidity and temperature, as well as soil type and utilization on the amount of nitrates and nitrites in the soil solution at the end of vegetation period. It was proved that statistically significant impact on the amounts of residual nitrate and nitrite ions was caused by the temperature and moisture of soil, its type, and the specific properties of the crops grown.

Statistical Modelling of the Soil Dielectric Constant

NASA Astrophysics Data System (ADS)

Usowicz, Boguslaw; Marczewski, Wojciech; Bogdan Usowicz, Jerzy; Lipiec, Jerzy

2010-05-01

The dielectric constant of soil is the physical property being very sensitive on water content. It funds several electrical measurement techniques for determining the water content by means of direct (TDR, FDR, and others related to effects of electrical conductance and/or capacitance) and indirect RS (Remote Sensing) methods. The work is devoted to a particular statistical manner of modelling the dielectric constant as the property accounting a wide range of specific soil composition, porosity, and mass density, within the unsaturated water content. Usually, similar models are determined for few particular soil types, and changing the soil type one needs switching the model on another type or to adjust it by parametrization of soil compounds. Therefore, it is difficult comparing and referring results between models. The presented model was developed for a generic representation of soil being a hypothetical mixture of spheres, each representing a soil fraction, in its proper phase state. The model generates a serial-parallel mesh of conductive and capacitive paths, which is analysed for a total conductive or capacitive property. The model was firstly developed to determine the thermal conductivity property, and now it is extended on the dielectric constant by analysing the capacitive mesh. The analysis is provided by statistical means obeying physical laws related to the serial-parallel branching of the representative electrical mesh. Physical relevance of the analysis is established electrically, but the definition of the electrical mesh is controlled statistically by parametrization of compound fractions, by determining the number of representative spheres per unitary volume per fraction, and by determining the number of fractions. That way the model is capable covering properties of nearly all possible soil types, all phase states within recognition of the Lorenz and Knudsen conditions. In effect the model allows on generating a hypothetical representative of the soil type, and that way it enables clear comparing to results from other soil type dependent models. The paper is focused on proper representing possible range of porosity in commonly existing soils. This work is done with aim of implementing the statistical-physical model of the dielectric constant to a use in the model CMEM (Community Microwave Emission Model), applicable to SMOS (Soil Moisture and Ocean Salinity ESA Mission) data. The input data to the model clearly accepts definition of soil fractions in common physical measures, and in opposition to other empirical models, does not need calibrating. It is not dependent on recognition of the soil by type, but instead it offers the control of accuracy by proper determination of the soil compound fractions. SMOS employs CMEM being funded only by the sand-clay-silt composition. Common use of the soil data, is split on tens or even hundreds soil types depending on the region. We hope that only by determining three element compounds of sand-clay-silt, in few fractions may help resolving the question of relevance of soil data to the input of CMEM, for SMOS. Now, traditionally employed soil types are converted on sand-clay-silt compounds, but hardly cover effects of other specific properties like the porosity. It should bring advantageous effects in validating SMOS observation data, and is taken for the aim in the Cal/Val project 3275, in the campaigns for SVRT (SMOS Validation and Retrieval Team). Acknowledgements. This work was funded in part by the PECS - Programme for European Cooperating States, No. 98084 "SWEX/R - Soil Water and Energy Exchange/Research".

Influence of glutamic acid enantiomers on C-mineralization.

PubMed

Formánek, Pavel; Vranová, Valerie; Lojková, Lea

2015-02-01

Seasonal dynamics in the mineralization of glutamic acid enantiomers in soils from selected ecosystems was determined and subjected to a range of treatments: ambient x elevated CO2 level and meadow x dense x thinned forest environment. Mineralization of glutamic acid was determined by incubation of the soil with 2 mg L- or D-glutamic acid g(-1) of dry soil to induce the maximum respiration rate. Mineralization of glutamic acid enantiomers in soils fluctuates over the course of a vegetation season, following a similar trend across a range of ecosystems. Mineralization is affected by environmental changes and management practices, including elevated CO2 level and thinning intensity. L-glutamic acid metabolism is more dependent on soil type as compared to metabolism of its D-enantiomer. The results support the hypothesis that the slower rate of D- compared to L- amino acid mineralization is due to different roles in anabolism and catabolism of the soil microbial community. © 2014 Wiley Periodicals, Inc.

Apollo 14 glasses and the origin of lunar soils

NASA Technical Reports Server (NTRS)

Wentworth, S. J.; Mckay, D. S.

1991-01-01

Electron microprobe for comparison with soil glass data were used to analyze homogeneous and heterogeneous glass clasts in four Apollo 14 regolith breccias (14042, 14301, 14313, and 14315). Glass types in the Apollo 14 samples were found to be dominated by highland compositions, which include KREEP, LKFM and highland basalt varieties. Only 14042 has a highland glass population similar to those of local Apollo 14 soils. Breccia 14301 stands out in that it is enriched in KREEP glasses with high K2O content, which are similar in composition to Apollo 12 ropy glasses. Only 14042 could be made from local present-day soils. Some of the ancient soils did not undergo breccia formation and closure, and they evolved by meteorite impact processing, by mixing together in various proportions, and by changes made by the addition of lithic fragments and other components. It is suggested that the Apollo 14 soils are made from mixtures of comminuted regolith breccias. A likely age sequence is presented.

CONVERGING PATTERNS OF UPTAKE AND HYDRAULIC REDISTRIBUTION OF SOIL WATER IN CONTRASTING WOODY VEGETATION TYPES

EPA Science Inventory

We used concurrent measurements of soil water content and soil water potential (Ysoil) to assess the effects of Ysoil on uptake and hydraulic redistribution (HR) of soil water by roots during seasonal drought cycles in six sites characterized by different types and amounts of woo...

Examining nitrogen dynamics in heterogeneous soils: preliminary work

NASA Astrophysics Data System (ADS)

Jolicoeur, J. L.; Salvage, K. M.

2004-05-01

A study is being conducted in the Catatonk Creek watershed, in the headwaters of the Susquehanna River, in order to determine the vulnerability of the valley-fill aquifers to nitrate contamination. The overall objective of this study is to evaluate the nitrogen retention mechanisms for a combination of different soil types and different agricultural land uses and is scheduled to last approximately 2 years with ongoing fieldwork starting the summer of 2003 to the spring of 2005. This project will investigate the residence time and the quantity of the nitrate leached below the root zone and due to enter eventually the groundwater, and the existence of subsurface flow draining the nitrate from the root zone to the adjacent streams. Finally, a numerical and an analytical model will be developed that can be used as a tool for predicting the long-term effect of fertilizer application as a source of nitrate loading to the underlying aquifer or to surface water. In order to address the objectives of this research, a field investigation of three experimental sites will be carried out. Data will be collected on land uses, agricultural practices, climatic factors, soil properties, nitrogen dynamics in the soil, and the flow pattern in the unsaturated soil zone. At each site soil physical and chemical properties will be determined for each layer of the root zone to a depth of 90 cm. The soil physical properties include soil moisture, saturated and unsaturated hydraulic conductivity, bulk density, soil temperature, particle size distribution and its water retention curve. Soil water content and matric potential will be monitored using conventional and geophysical techniques including matric potential blocks, water content reflectometer sensors, Time Domain Reflectometry (TDR) and Ground Penetrating Radar (GPR). The soil chemical properties include soil total organic carbon and total nitrogen, nitrate (NO3) and ammonium (NH4) and will be determined at the beginning and at the end of the field season. The soil water will be collected monthly at three depths at each site throughout the growing season and will be analyzed for nitrate and ammonium.

Amazonas project: Application of remote sensing techniques for the integrated survey of natural resources in Amazonas. [Brazil

NASA Technical Reports Server (NTRS)

Dejesusparada, N. (Principal Investigator)

1981-01-01

The use of LANDSAT multispectral scanner and return beam vidicon imagery for surveying the natural resources of the Brazilian Amazonas is described. Purposes of the Amazonas development project are summarized. The application of LANDSAT imagery to identification of vegetation coverage and soil use, identification of soil types, geomorphology, and geology and highway planning is discussed. An evaluation of the worth of LANDSAT imagery in mapping the region is presented. Maps generated by the project are included.

Temporal variability in Cu speciation, phytotoxicity, and soil microbial activity of Cu-polluted soils as affected by elevated temperature.

PubMed

Fu, Qing-Long; Weng, Nanyan; Fujii, Manabu; Zhou, Dong-Mei

2018-03-01

Global warming has obtained increasing attentions due to its multiple impacts on agro-ecosystem. However, limited efforts had been devoted to reveal the temporal variability of metal speciation and phytotoxicity of heavy metal-polluted soils affected by elevated temperature under the global warming scenario. In this study, effects of elevated temperature (15 °C, 25 °C, and 35 °C) on the physicochemical properties, microbial metabolic activities, and phytotoxicity of three Cu-polluted soils were investigated by a laboratory incubation study. Soil physicochemical properties were observed to be significantly altered by elevated temperature with the degree of temperature effect varying in soil types and incubation time. The Biolog and enzymatic tests demonstrated that soil microbial activities were mainly controlled and decreased with increasing incubation temperature. Moreover, plant assays confirmed that the phytotoxicity and Cu uptake by wheat roots were highly dependent on soil types but less affected by incubation temperature. Overall, the findings in this study have highlighted the importance of soil types to better understand the temperature-dependent alternation of soil properties, Cu speciation and bioavailability, as well as phytotoxicity of Cu-polluted soils under global warming scenario. The present study also suggests the necessary of investigating effects of soil types on the transport and accumulation of toxic elements in soil-crop systems under global warming scenario. Copyright © 2017 Elsevier Ltd. All rights reserved.

Modeling Stand-Scale Patterns in Evapotranspiration and Soil Moisture in a Heterogeneous Plant Canopy: A Coupled Subsurface-Land Surface Approach

NASA Astrophysics Data System (ADS)

Miller, G. R.; Gou, S.; Ferguson, I. M.; Maxwell, R. M.

2011-12-01

Savanna ecosystems present a well-known modeling challenge; understory grasses and overstory woody vegetation combine to form an open, heterogeneous canopy that creates strong spatial differences in soil moisture and evapotranspiration rates. In this analysis, we used ParFlow.CLM to create a stand-scale model of the Tonzi Ranch oak savanna, based on extensive topography, vegetation, soil, and hydrogeology data collected at the site. Measurements included canopy distribution and ground surface elevation from airborne Lidar, depth to groundwater from deep piezometers, soil and rock hydraulic conductivity, and leaf area index. We then compared the results to the site's long-term data records of radiative flux partitioning, obtained using the eddy-covariance method, and soil moisture, collected via a distributed network of capacitance probes. In order to obtain good agreement between the measured and modeled values, we identified several necessary modifications to the current CLM parameterization. These changes included the addition of a "winter grass" type and the alteration of the root structure and water stress functions to accommodate uptake of groundwater by deep roots. Finally, we compared variograms of site parameters and response variables and performed a scaling analysis relating ET and soil moisture variance to sampling size.

Depth-resolved microbial community analyses in two contrasting soil cores contaminated by antimony and arsenic.

PubMed

Xiao, Enzong; Krumins, Valdis; Xiao, Tangfu; Dong, Yiran; Tang, Song; Ning, Zengping; Huang, Zhengyu; Sun, Weimin

2017-02-01

Investigation of microbial communities of soils contaminated by antimony (Sb) and arsenic (As) is necessary to obtain knowledge for their bioremediation. However, little is known about the depth profiles of microbial community composition and structure in Sb and As contaminated soils. Our previous studies have suggested that historical factors (i.e., soil and sediment) play important roles in governing microbial community structure and composition. Here, we selected two different types of soil (flooded paddy soil versus dry corn field soil) with co-contamination of Sb and As to study interactions between these metalloids, geochemical parameters and the soil microbiota as well as microbial metabolism in response to Sb and As contamination. Comprehensive geochemical analyses and 16S rRNA amplicon sequencing were used to shed light on the interactions of the microbial communities with their environments. A wide diversity of taxonomical groups was present in both soil cores, and many were significantly correlated with geochemical parameters. Canonical correspondence analysis (CCA) and co-occurrence networks further elucidated the impact of geochemical parameters (including Sb and As contamination fractions and sulfate, TOC, Eh, and pH) on vertical distribution of soil microbial communities. Metagenomes predicted from the 16S data using PICRUSt included arsenic metabolism genes such as arsenate reductase (ArsC), arsenite oxidase small subunit (AoxA and AoxB), and arsenite transporter (ArsA and ACR3). In addition, predicted abundances of arsenate reductase (ArsC) and arsenite oxidase (AoxA and AoxB) genes were significantly correlated with Sb contamination fractions, These results suggest potential As biogeochemical cycling in both soil cores and potentially dynamic Sb biogeochemical cycling as well. Copyright © 2016 Elsevier Ltd. All rights reserved.

Sensitivity and uncertainty analysis for Abreu & Johnson numerical vapor intrusion model.

PubMed

Ma, Jie; Yan, Guangxu; Li, Haiyan; Guo, Shaohui

2016-03-05

This study conducted one-at-a-time (OAT) sensitivity and uncertainty analysis for a numerical vapor intrusion model for nine input parameters, including soil porosity, soil moisture, soil air permeability, aerobic biodegradation rate, building depressurization, crack width, floor thickness, building volume, and indoor air exchange rate. Simulations were performed for three soil types (clay, silt, and sand), two source depths (3 and 8m), and two source concentrations (1 and 400 g/m(3)). Model sensitivity and uncertainty for shallow and high-concentration vapor sources (3m and 400 g/m(3)) are much smaller than for deep and low-concentration sources (8m and 1g/m(3)). For high-concentration sources, soil air permeability, indoor air exchange rate, and building depressurization (for high permeable soil like sand) are key contributors to model output uncertainty. For low-concentration sources, soil porosity, soil moisture, aerobic biodegradation rate and soil gas permeability are key contributors to model output uncertainty. Another important finding is that impacts of aerobic biodegradation on vapor intrusion potential of petroleum hydrocarbons are negligible when vapor source concentration is high, because of insufficient oxygen supply that limits aerobic biodegradation activities. Copyright © 2015 Elsevier B.V. All rights reserved.

Effects of anthropogenic particles on the chemical and geophysical properties of urban soils, Detroit, Michigan

NASA Astrophysics Data System (ADS)

Orlicki, Katharine M.

There is a great need in many cities for a better quality of urban soil maps. This is due to the increasing interest in repurposing vacant land for urban redevelopment, agriculture, and green infrastructure. Mapping vacant urban land in Detroit can be very difficult because anthropogenic soils were often highly variable and frequently contained demolition debris (such as brick), making it difficult to use a hand auger. This study was undertaken in Detroit, MI to create a more efficient way to map urban soils based on their geophysical and chemical properties. This will make the mapping process faster, less labor intensive, and therefore more cost effective. Optical and chemical criteria for the identification and classification of microartifacts (MAs) were made from a set of reference artifacts of a known origin. These MAs were then observed and tested in urban topsoil samples from sites in Detroit, Michigan that represent three different land use types (residential demolition, fly ash-impacted, and industrial). Optical analyses, SEM, EDAX, and XRD showed that reference MAs may be classified into five basic compositional types (carbonaceous, calcareous, siliceous, ferruginous and miscellaneous). Reference MAs were generally distinguishable using optical microscopy by color, luster, fracture and microtexture. MAs that were more difficult to classify were further differentiable when using SEM, EDAX, and XRD. MAs were found in all of the anthropogenic soils studied, but were highly variable. All three study sites had concentrations coal-related wastes were the most common types of MAs observed and often included coal, ash (microspheres, microagglomerate), cinders, and burnt shale. MAs derived from waste building materials such as brick, mortar, and glass, were typically found on residential demolition sites. Manufacturing waste MAs, which included iron-making slag and coked coal were commonly observed on industrial sites. Fly ash-impacted sites were composed of only microspheres and microagglomerate that were concentrated within the soils by airborne deposition, making it widespread. These results support the hypothesis that MA assemblages of distinct composition vary with land use. Therefore, it seems likely that magnetic susceptibility surveying and other geophysical methods will prove effective for mapping anthropogenic soils on vacant urban land. Anthropogenic soils and MAs were assessed for pH, electrical conductivity (EC), and magnetic susceptibility (MS). The A horizons of urban soils at residential demolition, industrial-impacted, and fly ash-impacted sites were found to be distinguishable from those of native soils. Anthropogenic soils were higher by one pH unit or more than the background level, had an EC value two to three times the background level, and had MS measurements up to 20 times greater than the background level. The analysis of reference artifacts suggested that the elevated pH of anthropogenic soils was caused by calcareous building material wastes, the elevated EC were the result of both calcareous and ferruginous wastes, and elevated MS were attributable to ferromagnetic materials. Anthropogenic soils collected at residential demolition sites were differentiable by EC, whereas those at collected form industrial sites were distinguishable using MS. Therefore, anthropogenic soils and native soils have a unique chemical and geophysical signature which can be highly dependent on the concentration of MAs. This suggests that EC and MS surveying methods may be used to remotely sense and map urban soils more effectively than using traditional methods alone.

Aggregating available soil water holding capacity data for crop yield models

NASA Technical Reports Server (NTRS)

Seubert, C. E.; Daughtry, C. S. T.; Holt, D. A.; Baumgardner, M. F.

1984-01-01

The total amount of water available to plants that is held against gravity in a soil is usually estimated as the amount present at -0.03 MPa average water potential minus the amount present at -1.5 MPa water potential. This value, designated available water-holding capacity (AWHC), is a very important soil characteristic that is strongly and positively correlated to the inherent productivity of soils. In various applications, including assessing soil moisture status over large areas, it is necessary to group soil types or series as to their productivity. Current methods to classify AWHC of soils consider only total capacity of soil profiles and thus may group together soils which differ greatly in AWHC as a function of depth in the profile. A general approach for evaluating quantitatively the multidimensional nature of AWHC in soils is described. Data for 902 soil profiles, representing 184 soil series, in Indiana were obtained from the Soil Characterization Laboratory at Purdue University. The AWHC for each of ten 150-mm layers in each soil was established, based on soil texture and parent material. A multivariate clustering procedure was used to classify each soil profile into one of 4, 8, or 12 classes based upon ten-dimensional AWHC values. The optimum number of classes depends on the range of AWHC in the population of oil profiles analyzed and on the sensitivity of a crop to differences in distribution of water within the soil profile.

Visually assessing the level of development and soil surface stability of cyanobacterially dominated biological soil crusts

USGS Publications Warehouse

Belnap, J.; Phillips, S.L.; Witwicki, D.L.; Miller, M.E.

2008-01-01

Biological soil crusts (BSCs) are an integral part of dryland ecosystems and often included in long-term ecological monitoring programs. Estimating moss and lichen cover is fairly easy and non-destructive, but documenting cyanobacterial level of development (LOD) is more difficult. It requires sample collection for laboratory analysis, which causes soil surface disturbance. Assessing soil surface stability also requires surface disturbance. Here we present a visual technique to assess cyanobacterial LOD and soil surface stability. We define six development levels of cyanobacterially dominated soils based on soil surface darkness. We sampled chlorophyll a concentrations (the most common way of assessing cyanobacterial biomass), exopolysaccharide concentrations, and soil surface aggregate stability from representative areas of each LOD class. We found that, in the laboratory and field, LOD classes were effective at predicting chlorophyll a soil concentrations (R2=68-81%), exopolysaccharide concentrations (R2=71%), and soil aggregate stability (R2=77%). We took representative photos of these classes to construct a field guide. We then tested the ability of field crews to distinguish these classes and found this technique was highly repeatable among observers. We also discuss how to adjust this index for the different types of BSCs found in various dryland regions.

[Bare Soil Moisture Inversion Model Based on Visible-Shortwave Infrared Reflectance].

PubMed

Zheng, Xiao-po; Sun, Yue-jun; Qin, Qi-ming; Ren, Hua-zhong; Gao, Zhong-ling; Wu, Ling; Meng, Qing-ye; Wang, Jin-liang; Wang, Jian-hua

2015-08-01

Soil is the loose solum of land surface that can support plants. It consists of minerals, organics, atmosphere, moisture, microbes, et al. Among its complex compositions, soil moisture varies greatly. Therefore, the fast and accurate inversion of soil moisture by using remote sensing is very crucial. In order to reduce the influence of soil type on the retrieval of soil moisture, this paper proposed a normalized spectral slope and absorption index named NSSAI to estimate soil moisture. The modeling of the new index contains several key steps: Firstly, soil samples with different moisture level were artificially prepared, and soil reflectance spectra was consequently measured using spectroradiometer produced by ASD Company. Secondly, the moisture absorption spectral feature located at shortwave wavelengths and the spectral slope of visible wavelengths were calculated after analyzing the regular spectral feature change patterns of different soil at different moisture conditions. Then advantages of the two features at reducing soil types' effects was synthesized to build the NSSAI. Thirdly, a linear relationship between NSSAI and soil moisture was established. The result showed that NSSAI worked better (correlation coefficient is 0.93) than most of other traditional methods in soil moisture extraction. It can weaken the influences caused by soil types at different moisture levels and improve the bare soil moisture inversion accuracy.

In situ burning of oil in coastal marshes. 1. Vegetation recovery and soil temperature as a function of water depth, oil type, and marsh type.

PubMed

Lin, Qianxin; Mendelssohn, Irving A; Bryner, Nelson P; Walton, William D

2005-03-15

In-situ burning of oiled wetlands potentially provides a cleanup technique that is generally consistent with present wetland management procedures. The effects of water depth (+10, +2, and -2 cm), oil type (crude and diesel), and oil penetration of sediment before the burn on the relationship between vegetation recovery and soil temperature for three coastal marsh types were investigated. The water depth over the soil surface during in-situ burning was a key factor controlling marsh plant recovery. Both the 10- and 2-cm water depths were sufficient to protect marsh vegetation from burning impacts, with surface soil temperatures of <35 and 48 degrees C, respectively. Plant survival rate and growth responses at these water depth burns were not significantly different from the unburned control. In contrast, a water table 2 cm below the soil surface during the burn resulted in high soil temperatures, with 90-200 degrees C at 0-0.5 cm soil depth and 55-75 degrees C at 1-2 cm soil depth. The 2-cm soil exposure to fire significantly impeded the post-burn recovery of Spartina alterniflora and Sagittaria lancifolia but did not detrimentally affect the recovery of Spartina patens and Distichlis spicata. Oil type (crude vs diesel) and oil applied to the marsh soil surface (0.5 L x m(-2)) before the burn did not significantly affect plant recovery. Thus, recovery is species-specific when no surface water exists. Even water at the soil surface will most likely protect wetland plants from burning impact.

The soil carbon/nitrogen ratio and moisture affect microbial community structures in alkaline permafrost-affected soils with different vegetation types on the Tibetan plateau.

PubMed

Zhang, Xinfang; Xu, Shijian; Li, Changming; Zhao, Lin; Feng, Huyuan; Yue, Guangyang; Ren, Zhengwei; Cheng, Guogdong

2014-01-01

In the Tibetan permafrost region, vegetation types and soil properties have been affected by permafrost degradation, but little is known about the corresponding patterns of their soil microbial communities. Thus, we analyzed the effects of vegetation types and their covariant soil properties on bacterial and fungal community structure and membership and bacterial community-level physiological patterns. Pyrosequencing and Biolog EcoPlates were used to analyze 19 permafrost-affected soil samples from four principal vegetation types: swamp meadow (SM), meadow (M), steppe (S) and desert steppe (DS). Proteobacteria, Acidobacteria, Bacteroidetes and Actinobacteria dominated bacterial communities and the main fungal phyla were Ascomycota, Basidiomycota and Mucoromycotina. The ratios of Proteobacteria/Acidobacteria decreased in the order: SM>M>S>DS, whereas the Ascomycota/Basidiomycota ratios increased. The distributions of carbon and nitrogen cycling bacterial genera detected were related to soil properties. The bacterial communities in SM/M soils degraded amines/amino acids very rapidly, while polymers were degraded rapidly by S/DS communities. UniFrac analysis of bacterial communities detected differences among vegetation types. The fungal UniFrac community patterns of SM differed from the others. Redundancy analysis showed that the carbon/nitrogen ratio had the main effect on bacteria community structures and their diversity in alkaline soil, whereas soil moisture was mainly responsible for structuring fungal communities. Thus, microbial communities and their functioning are probably affected by soil environmental change in response to permafrost degradation. Copyright © 2014 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

General soil map Lower Pantano wash area, Pima County, Arizona

NASA Technical Reports Server (NTRS)

Richardson, M. L.

1972-01-01

High altitude color photography was used to determine soil type variation over large areas at a contact print scale of 1:125,000. It was found that color variation and land form could be used as a basis for assigning seven soil mapping units to the area as depicted on stereoscopic pairs of the color photography. A unit is assigned by soil scientists on the basis of similarity of soil features in the area to predetermined physical and chemical characteristics of the same soil type.

Development of a fiber optic pavement subgrade strain measurement system

NASA Astrophysics Data System (ADS)

Miller, Craig Emerson

2000-11-01

This dissertation describes the development of a fiber optic sensing system to measure strains within the soil subgrade of highway pavements resulting from traffic loads. The motivation to develop such a device include improvements to: (1)all phases of pavement design, (2)theoretical models used to predict pavement performance, and (3)pavement rehabilitation. The design of the sensing system encompasses selecting an appropriate transducer design as well as the development of optimal optical and demodulation systems. The first is spring based, which attempts to match its spring stiffness to that of the soil-data indicate it is not an optimal transducer design. The second transducer implements anchoring plates attached to two telescoping tubes which allows the soil to be compacted to a desired density between the plates to dictate the transducer's behavior. Both transducers include an extrinsic Fabry- Perot cavity to impose the soil strains onto a phase change of the optical signal propagating through the cavity. The optical system includes a low coherence source and allows phase modulation via path length stretching by adding a second interferometer in series with the transducer, resulting in a path matched differential interferometer. A digitally implemented synthetic heterodyne demodulator based on a four step phase stepping algorithm is used to obtain unambiguous soil strain information from the displacement of the Fabry-Perot cavity. The demodulator is calibrated and characterized by illuminating the transducer with a second long coherence source of different wavelength. The transducer using anchoring plates is embedded within cylindrical soil specimens of varying soil types and soil moisture contents. Loads are applied to the specimen and resulting strains are measured using the embedded fiber optic gage and LVDTs attached to the surface of the specimen. This experimental verification is substantiated using a finite element analysis to predict any differences between interior and surface strains in the specimens. The experimental data indicate 2-inch diameter anchoring plates embedded in soil close to its optimum moisture content allow for very accurate soil strain measurements.

Climate change induced rainfall patterns affect wheat productivity and agroecosystem functioning dependent on soil types

NASA Astrophysics Data System (ADS)

Tabi Tataw, James; Baier, Fabian; Krottenthaler, Florian; Pachler, Bernadette; Schwaiger, Elisabeth; Whylidal, Stefan; Formayer, Herbert; Hösch, Johannes; Baumgarten, Andreas; Zaller, Johann G.

2014-05-01

Wheat is a crop of global importance supplying more than half of the world's population with carbohydrates. We examined, whether climate change induced rainfall patterns towards less frequent but heavier events alter wheat agroecosystem productivity and functioning under three different soil types. Therefore, in a full-factorial experiment Triticum aestivum L. was cultivated in 3 m2 lysimeter plots containing the soil types sandy calcaric phaeozem, gleyic phaeozem or calcic chernozem. Prognosticated rainfall patterns based on regionalised climate change model calculations were compared with current long-term rainfall patterns; each treatment combination was replicated three times. Future rainfall patterns significantly reduced wheat growth and yield, reduced the leaf area index, accelerated crop development, reduced arbuscular mycorrhizal fungi colonisation of roots, increased weed density and the stable carbon isotope signature (δ13C) of both old and young wheat leaves. Different soil types affected wheat growth and yield, ecosystem root production as well as weed abundance and biomass. The interaction between climate and soil type was significant only for the harvest index. Our results suggest that even slight changes in rainfall patterns can significantly affect the functioning of wheat agroecosystems. These rainfall effects seemed to be little influenced by soil types suggesting more general impacts of climate change across different soil types. Wheat production under future conditions will likely become more challenging as further concurrent climate change factors become prevalent.

Hydrocarbon status of soils in the asphalt deposit area (Samara Bend)

NASA Astrophysics Data System (ADS)

Pikovskiy, Yu. I.; Gennadiev, A. N.; Kovach, R. G.; Zhidkin, A. P.; Khlynina, N. I.; Kiseleva, A. Yu.

2017-04-01

The composition and distribution features of the main components of soil hydrocarbon complex― organic (noncarbonate) carbon, hexane bitumoids, and individual polycyclic aromatic hydrocarbons (PAHs)―in the area of depleted Bakhilovo asphalt deposit (Samara oblast) have been studied. According to their proportions, three genetic types of soil hydrocarbon status are distinguished: (a) emanation-injection type prevailing within the limits of the former production field and characterized by anomalous contents of heavy resinous bitumoids (5000-7000 mg/kg on the average) throughout the soil profile and a high content of PAHs (4-9 mg/kg on the average, 29 mg/kg as the maximum, with the dominance of naphthalene homologues); (b) emanation-biogeochemical type confined to mechanogenically undisturbed soils within and beyond the deposit area, where the emanation component is manifested in soils with heavy texture and higher concentrations and very light composition of bitumoids in the lower parts of the soil profile; and (c) atmosedimentation-biogeochemical type characteristic of conventionally background soils with light texture; benzo[ a]pyrene traces are detected among PAHs in the upper soil horizon, which indicates the input of this hydrocarbon with aerosols from the atmosphere; the concentrations of bitumoids and PAHs in parent rocks are lower than in the soils.

Soil magnetic susceptibility mapping as a pollution and provenance tool: an example from southern New Zealand

NASA Astrophysics Data System (ADS)

Martin, A. P.; Ohneiser, C.; Turnbull, R. E.; Strong, D. T.; Demler, S.

2018-02-01

The presence or absence, degree and variation of heavy metal contamination in New Zealand soils is a matter of ongoing debate as it affects soil quality, agriculture and human health. In many instances, however, the soil heavy metal concentration data do not exist to answer these questions and the debate is ongoing. To address this, magnetic susceptibility (a common proxy for heavy metal contamination) values were measured in topsoil (0-30 cm) and subsoil (50-70 cm) at grid sites spaced at 8 km intervals across ca. 20 000 km2 of southern New Zealand. Samples were measured for both mass- and volume-specific magnetic susceptibility, with results being strongly, positively correlated. Three different methods of determining anomalies were applied to the data including the topsoil-subsoil difference method, Tukey boxplot method and geoaccumulation index method, with each method filtering out progressively more anomalies. Additional soil magnetic (hysteresis, isothermal remanence and thermomagnetic) measurements were made on a select subset of samples from anomalous sites. Magnetite is the dominant remanence carrying mineral, and magnetic susceptibility is governed by that minerals concentration in soils, rather than mineral type. All except two anomalous sites have a dominant geogenic source (cf. anthropogenic). By proxy, heavy metal contamination in southern New Zealand soils is minimal, making them relatively pristine. The provenance of the magnetic minerals in the anomalous sites can be traced back to likely sources in outcrops of igneous rocks within the same catchment, terrane or rock type: a distance of <100 km but frequently <1 km. Soil provenance is a key step when mapping element or isotopic distribution, vectoring to mineralization or studying soil for agricultural suitability, water quality or environmental regulation. Measuring soil magnetic susceptibility is a useful, quick and inexpensive tool that usefully supplements soil geochemical data.

The effects of land use and its patterns on soil properties in a small catchment of the Loess Plateau.

PubMed

Wang, Jun; Fu, Bo-jie; Qiu, Yang; Chen, Li-ding

2003-03-01

Due to relatively strong human activities in the hilly area of Loess Plateau, the natural vegetation has been destroyed, and landscape pattern based on agricultural land matrix was land use mosaic composing of shrub land, grassland, woodland and orchard. This pattern has an important effect on soil moisture and soil nutrients. The Danangou catchment, a typical small catchment, was selected to study the effects of land use and its patterns on soil moisture and nutrients in this paper. The results are as follows: The comparisons of soil moisture among seven land uses for wet year and dry year were performed; (1) the average of soil moisture content for whole catchment was 12.11% in wet year, while it was 9.37% in dry year; (2) soil moisture among seven land uses significantly different in dry year, but not in wet year; (3) from wet year to dry year, the profile type of soil moisture changed from decreasing type to fluctuation-type and from fluctuant type to increasing type; (4) the increasing trend in soil moisture from the top to foot of hillslope occurred in simple land use along slope, while complicated distribution of soil moisture was observed in multiple land uses along slope. The relationship between soil nutrients and land uses and landscape positions were analysed: (1) five nutrient contents of soil organic matter (SOM), total N (TN), available N (AN), total P (TP) and available P (AP) in hilly area were lower than that in other area. SOM content was less than 1%, TN content less than 0.07%, and TP content between 0.05% and 0.06%; (2) SOM and TN contents in woodland, shrub land and grassland were significantly higher than that in fallow land and cropland, and higher level in soil fertility was found in crop-fruit intercropping land among croplands; (3) soil nutrient distribution and responses to landscape positions were variable depending on slope and the location of land use types.

Soil type affects Pinus ponderosa var. scopulorum (Pinaceae) seedling growth in simulated drought experiments.

PubMed

Lindsey, Alexander J; Kilgore, Jason S

2013-08-01

Effects of drought stress and media type interactions on growth of Pinus ponderosa var. scopulorum germinants were investigated. • Soil properties and growth responses under drought were compared across four growth media types: two native soils (dolomitic limestone and granite), a soil-less industry standard conifer medium, and a custom-mixed conifer medium. After 35 d of growth, the seedlings under drought stress (reduced watering) produced less shoot and root biomass than watered control seedlings. Organic media led to decreased root biomass, but increased root length and shoot biomass relative to the mineral soils. • Media type affected root-to-shoot biomass partitioning of P. ponderosa var. scopulorum, which may influence net photosynthetic rates, growth, and long-term seedling survival. Further work should examine how specific soil properties like bulk density and organic matter influence biomass allocation in greenhouse studies.

Soil type affects Pinus ponderosa var. scopulorum (Pinaceae) seedling growth in simulated drought experiments1

PubMed Central

Lindsey, Alexander J.; Kilgore, Jason S.

2013-01-01

• Premise of the study: Effects of drought stress and media type interactions on growth of Pinus ponderosa var. scopulorum germinants were investigated. • Methods and Results: Soil properties and growth responses under drought were compared across four growth media types: two native soils (dolomitic limestone and granite), a soil-less industry standard conifer medium, and a custom-mixed conifer medium. After 35 d of growth, the seedlings under drought stress (reduced watering) produced less shoot and root biomass than watered control seedlings. Organic media led to decreased root biomass, but increased root length and shoot biomass relative to the mineral soils. • Conclusions: Media type affected root-to-shoot biomass partitioning of P. ponderosa var. scopulorum, which may influence net photosynthetic rates, growth, and long-term seedling survival. Further work should examine how specific soil properties like bulk density and organic matter influence biomass allocation in greenhouse studies. PMID:25202578

Impact of Plant Functional Types on Coherence Between Precipitation and Soil Moisture: A Wavelet Analysis

NASA Astrophysics Data System (ADS)

Liu, Qi; Hao, Yonghong; Stebler, Elaine; Tanaka, Nobuaki; Zou, Chris B.

2017-12-01

Mapping the spatiotemporal patterns of soil moisture within heterogeneous landscapes is important for resource management and for the understanding of hydrological processes. A critical challenge in this mapping is comparing remotely sensed or in situ observations from areas with different vegetation cover but subject to the same precipitation regime. We address this challenge by wavelet analysis of multiyear observations of soil moisture profiles from adjacent areas with contrasting plant functional types (grassland, woodland, and encroached) and precipitation. The analysis reveals the differing soil moisture patterns and dynamics between plant functional types. The coherence at high-frequency periodicities between precipitation and soil moisture generally decreases with depth but this is much more pronounced under woodland compared to grassland. Wavelet analysis provides new insights on soil moisture dynamics across plant functional types and is useful for assessing differences and similarities in landscapes with heterogeneous vegetation cover.

Between and within-field variation in physico-chemical soil properties of vineyards: implications for terroir zoning and management in Heuvelland, Belgium

NASA Astrophysics Data System (ADS)

Tavernier, Emma; Verdoodt, Ann; Cornelis, Wim; Delbecque, Nele; Tiebergijn, Lynn; Seynnaeve, Marleen; Gabriels, Donald

2015-04-01

The 'Heuvelland' region with a surface area of 94 km² is situated in the Province of West Flanders, Belgium, bordering with France. The region comprises a number of hills ("heuvel") on which a fast growing 'wine culture' is developing. Both professional as well as non-professional wine makers together cultivate about 19 ha of vineyards, and are still expanding. Grapes cultivated include Chardonnay, Pinot gris and Pinot noir among others. The small-scale, strongly dispersed vineyards are located in different landscape positions of variable aspect. The objective of our preliminary study was to assess the between-field and within-field variation in physico-chemical soil properties of these vineyards with the aim to better characterise the terroir(s) in Heuvelland and provide guidelines for soil management. Fourteen vineyards from five different wineries were selected for detailed soil sampling. Twenty-five sampling sites were chosen according to the topography, soil map units and observed variability in grape growth. The soil was sampled using 15 cm depth increments up to a depth of 60 cm or a shallower lithic contact. Composite samples of 5 sampling locations along the contour lines were taken per within-field zone. Besides the texture, pH, organic carbon, total nitrogen, available phosphorous and exchangeable base cations (Ca, Mg, K), also some micronutrients (Fe, B, Cu, Mn) were determined using standard laboratory procedures. The soils developed on Quaternary niveo-eolian sandy loam and loamy sediments of variable thickness covering marine sandy and clayey sediments of the Tertiary. Where the Tertiary clayey sediments occur at shallow depth, they can strongly influence the internal drainage. At higher positions in the landscape, iron-rich sandstone layers are found at shallow depth. Fragments of this iron-rich sandstone can also be found at lower positions (colluvial material). This iron sandstone is claimed to contribute to the unique character of this wine growing region. According to the soil map of Belgium (scale 1:20,000), the soils are characterized by variable depth, texture, internal drainage and profile development. As such, the 23 vineyards in Heuvelland are found on 21 different soil types; of which 12 different soil types are included within our sampling strategy. Our sampling furthermore revealed an even greater variability in physico-chemical soil properties than reflected by the soil map. This leads to a 'tentative' conclusion that Heuvelland cannot be considered as one natural terroir as such and that the wine growers can potentially improve their production by adapting their management to local soil properties using the improved knowledge on the vineyard soils.

The representation of non-equilibrium soil types in earth system models and its impact on carbon cycle projections

NASA Astrophysics Data System (ADS)

Hugelius, G.; Ahlström, A.; Canadell, J.; Koven, C. D.; Jackson, R. B.; Luo, Y.

2016-12-01

Soils hold the largest reactive pool of carbon (C) on earth. Global soil organic C stocks (0-200 cm depth plus full peatland depth) are estimated to 2200 Pg C (adapted from Hugelius et al., 2014, Köchy et al., 2015 and Batjes, 2016). Soil C stocks in Earth system models (ESMs) can be generated by running the model over a longer time period until soil C pools are in or near steady-state. Inherent in this concept is the idea that soil C stocks are in (quasi)equilibrium as determined by the balance of net ecosystem input to soil organic matter and its turnover. The rate of turnover is sometimes subdivided into several pools and the rates are affected by various environmental factors. Here we break down the empirically based estimates of global soil C pools into equilibrium-type soils which current (Coupled Model Intercomparison Project, phase 5; CMIP5) generation ESMs are set-up to represent and non-equilibrium type soils which are generally not represented in current ESMs. We define equilibrium soils as those where pedogenesis (and associated soil C formation) is not significantly limited by the environmental factors perennial soil freezing, waterlogging/anoxia or limited unconsolidated soil substrate. This is essentially all permafrost-free mineral soils that are not in a wetland or alpine setting. On the other hand, non-equlibrium soils are defined as permafrost soils, peatlands and alpine soils with a limited fine-soil matrix. Based on geospatial analyses of state-of-the-art datasets on soil C stocks, we estimate that the global soil C pool is divided roughly equally between equilibrium and non-equlibrium type soils. We discuss the ways in which this result affects C cycling in ESMs and projections of soil C sensitivity under a changing climate. ReferencesBatjes N.H. (2016) Geoderma, 269, 61-68, doi: 10.1016/j.geoderma.2016.01.034 Hugelius G. et al. (2014) Biogeosciences, 11, 6573-6593, doi:10.5194/bg-11-6573-2014 Köchy M. et al. (2015) Soil 1, 351-365. DOI: doi:10.5194/soil-1-351-2015

Analysis of Rainfall Infiltration Law in Unsaturated Soil Slope

PubMed Central

Zhang, Gui-rong; Qian, Ya-jun; Wang, Zhang-chun; Zhao, Bo

2014-01-01

In the study of unsaturated soil slope stability under rainfall infiltration, it is worth continuing to explore how much rainfall infiltrates into the slope in a rain process, and the amount of rainfall infiltrating into slope is the important factor influencing the stability. Therefore, rainfall infiltration capacity is an important issue of unsaturated seepage analysis for slope. On the basis of previous studies, rainfall infiltration law of unsaturated soil slope is analyzed. Considering the characteristics of slope and rainfall, the key factors affecting rainfall infiltration of slope, including hydraulic properties, water storage capacity (θ s - θ r), soil types, rainfall intensities, and antecedent and subsequent infiltration rates on unsaturated soil slope, are discussed by using theory analysis and numerical simulation technology. Based on critical factors changing, this paper presents three calculation models of rainfall infiltrability for unsaturated slope, including (1) infiltration model considering rainfall intensity; (2) effective rainfall model considering antecedent rainfall; (3) infiltration model considering comprehensive factors. Based on the technology of system response, the relationship of rainfall and infiltration is described, and the prototype of regression model of rainfall infiltration is given, in order to determine the amount of rain penetration during a rain process. PMID:24672332

Analysis of rainfall infiltration law in unsaturated soil slope.

PubMed

Zhang, Gui-rong; Qian, Ya-jun; Wang, Zhang-chun; Zhao, Bo

2014-01-01

In the study of unsaturated soil slope stability under rainfall infiltration, it is worth continuing to explore how much rainfall infiltrates into the slope in a rain process, and the amount of rainfall infiltrating into slope is the important factor influencing the stability. Therefore, rainfall infiltration capacity is an important issue of unsaturated seepage analysis for slope. On the basis of previous studies, rainfall infiltration law of unsaturated soil slope is analyzed. Considering the characteristics of slope and rainfall, the key factors affecting rainfall infiltration of slope, including hydraulic properties, water storage capacity (θs - θr), soil types, rainfall intensities, and antecedent and subsequent infiltration rates on unsaturated soil slope, are discussed by using theory analysis and numerical simulation technology. Based on critical factors changing, this paper presents three calculation models of rainfall infiltrability for unsaturated slope, including (1) infiltration model considering rainfall intensity; (2) effective rainfall model considering antecedent rainfall; (3) infiltration model considering comprehensive factors. Based on the technology of system response, the relationship of rainfall and infiltration is described, and the prototype of regression model of rainfall infiltration is given, in order to determine the amount of rain penetration during a rain process.

The Water Cycle, a Potential Source of the Bacterial Pathogen Bacillus cereus.

PubMed

Brillard, Julien; Dupont, Christian M S; Berge, Odile; Dargaignaratz, Claire; Oriol-Gagnier, Stéphanie; Doussan, Claude; Broussolle, Véronique; Gillon, Marina; Clavel, Thierry; Bérard, Annette

2015-01-01

The behaviour of the sporulating soil-dwelling Bacillus cereus sensu lato (B. cereus sl) which includes foodborne pathogenic strains has been extensively studied in relation to its various animal hosts. The aim of this environmental study was to investigate the water compartments (rain and soil water, as well as groundwater) closely linked to the primary B. cereus sl reservoir, for which available data are limited. B. cereus sl was present, primarily as spores, in all of the tested compartments of an agricultural site, including water from rain to groundwater through soil. During rain events, leachates collected after transfer through the soil eventually reached the groundwater and were loaded with B. cereus sl. In groundwater samples, newly introduced spores of a B. cereus model strain were able to germinate, and vegetative cells arising from this event were detected for up to 50 days. This first B. cereus sl investigation in the various types of interrelated environments suggests that the consideration of the aquatic compartment linked to soil and to climatic events should provide a better understanding of B. cereus sl ecology and thus be relevant for a more accurate risk assessment of food poisoning caused by B. cereus sl pathogenic strains.

Investigation of the effects of phosphate fertilizer application on the heavy metal content in agricultural soils with different cultivation patterns.

PubMed

Cheraghi, Mehrdad; Lorestani, Bahareh; Merrikhpour, Hajar

2012-01-01

The use of phosphate fertilizers is essential in agriculture, because they supply farmland with nutrients for growing plants. However, heavy metals might be included as impurities in natural materials and minerals, so heavy metals can also be present in phosphate fertilizers or other chemical fertilizers. The aim of this work was to assess the heavy metal content and contamination status of agricultural soils in the Hamadan province of Iran used for the cultivation of different crops, including cucumber, potatoes, and sugar beet. Surface soil samples were collected and analyzed to determine the total concentration of specific elements (As, Cd, Cr, Cu, Fe, Mn, Ni, Pb, and Zn), before the pollution index was calculated for each element. Soils used for the cultivation of the three types of crop were not contaminated with As, Cr, Cu, Pb, or Zn. However, the pollution indices for Cd were 1.1, 4.4, and 3.8 in cucumber, potato, and sugar beet fields, respectively, which indicated moderate, high, and high levels of contamination, respectively. Soils from potato and sugar beet fields were heavily contaminated with Cd, which may have resulted from long-term overuse of phosphate fertilizers.

The Water Cycle, a Potential Source of the Bacterial Pathogen Bacillus cereus

PubMed Central

Brillard, Julien; Dupont, Christian M. S.; Berge, Odile; Dargaignaratz, Claire; Oriol-Gagnier, Stéphanie; Doussan, Claude; Broussolle, Véronique; Gillon, Marina; Clavel, Thierry; Bérard, Annette

2015-01-01

The behaviour of the sporulating soil-dwelling Bacillus cereus sensu lato (B. cereus sl) which includes foodborne pathogenic strains has been extensively studied in relation to its various animal hosts. The aim of this environmental study was to investigate the water compartments (rain and soil water, as well as groundwater) closely linked to the primary B. cereus sl reservoir, for which available data are limited. B. cereus sl was present, primarily as spores, in all of the tested compartments of an agricultural site, including water from rain to groundwater through soil. During rain events, leachates collected after transfer through the soil eventually reached the groundwater and were loaded with B. cereus sl. In groundwater samples, newly introduced spores of a B. cereus model strain were able to germinate, and vegetative cells arising from this event were detected for up to 50 days. This first B. cereus sl investigation in the various types of interrelated environments suggests that the consideration of the aquatic compartment linked to soil and to climatic events should provide a better understanding of B. cereus sl ecology and thus be relevant for a more accurate risk assessment of food poisoning caused by B. cereus sl pathogenic strains. PMID:25918712

Influence of disturbance on temperate forest productivity

USGS Publications Warehouse

Peters, Emily B.; Wythers, Kirk R.; Bradford, John B.; Reich, Peter B.

2013-01-01

Climate, tree species traits, and soil fertility are key controls on forest productivity. However, in most forest ecosystems, natural and human disturbances, such as wind throw, fire, and harvest, can also exert important and lasting direct and indirect influence over productivity. We used an ecosystem model, PnET-CN, to examine how disturbance type, intensity, and frequency influence net primary production (NPP) across a range of forest types from Minnesota and Wisconsin, USA. We assessed the importance of past disturbances on NPP, net N mineralization, foliar N, and leaf area index at 107 forest stands of differing types (aspen, jack pine, northern hardwood, black spruce) and disturbance history (fire, harvest) by comparing model simulations with observations. The model reasonably predicted differences among forest types in productivity, foliar N, leaf area index, and net N mineralization. Model simulations that included past disturbances minimally improved predictions compared to simulations without disturbance, suggesting the legacy of past disturbances played a minor role in influencing current forest productivity rates. Modeled NPP was more sensitive to the intensity of soil removal during a disturbance than the fraction of stand mortality or wood removal. Increasing crown fire frequency resulted in lower NPP, particularly for conifer forest types with longer leaf life spans and longer recovery times. These findings suggest that, over long time periods, moderate frequency disturbances are a relatively less important control on productivity than climate, soil, and species traits.

Monitoring rangeland dynamics in Senegal with advanced very high resolution radiometer data

USGS Publications Warehouse

Tappan, G. Gray; Tyler, Dean J.; Wehde, M. E.; Moore, Donald G.

1992-01-01

Time‐series Normalized Difference Vegetation Index (NDVI) data, computed from Advanced Very High Resolution Radiometer data, are being used by regional and national programs in the African Sahel to monitor seasonal rangeland conditions. The data are often used as indicators of grazing conditions and drought. However, distinguishing rangelands from other vegetation cover types on NDVI images is difficult. A second complication is that rangeland types and their associated productivity vary geographically by soil type. To effectively assess rangeland conditions, seasonal fluctuations (due to climatic cycles) must be isolated from long‐term production characteristics associated with vegetation type and soil differences. Rangeland NDVI dynamics, including qualitative assessments of rangeland production, and the timing and length of the growing season in Senegal were examined by using 7.4‐km global area coverage satellite data. Analyses were based on 10‐day NDVI composite image data from 1982 through 1989. The NDVI image data were stratified by rangeland and soil polygons derived from locally available resource maps. Time‐series NDVI statistics were calculated from the resource polygons that had been interpreted into high, medium, and low production rangelands. Analysts monitoring rangeland conditions can better identify seasonal anomalies such as drought by comparing production potential within homogeneous; resource polygons with the current NDVI data.

Prediction of soil organic carbon partition coefficients by soil column liquid chromatography.

PubMed

Guo, Rongbo; Liang, Xinmiao; Chen, Jiping; Wu, Wenzhong; Zhang, Qing; Martens, Dieter; Kettrup, Antonius

2004-04-30

To avoid the limitation of the widely used prediction methods of soil organic carbon partition coefficients (KOC) from hydrophobic parameters, e.g., the n-octanol/water partition coefficients (KOW) and the reversed phase high performance liquid chromatographic (RP-HPLC) retention factors, the soil column liquid chromatographic (SCLC) method was developed for KOC prediction. The real soils were used as the packing materials of RP-HPLC columns, and the correlations between the retention factors of organic compounds on soil columns (ksoil) and KOC measured by batch equilibrium method were studied. Good correlations were achieved between ksoil and KOC for three types of soils with different properties. All the square of the correlation coefficients (R2) of the linear regression between log ksoil and log KOC were higher than 0.89 with standard deviations of less than 0.21. In addition, the prediction of KOC from KOW and the RP-HPLC retention factors on cyanopropyl (CN) stationary phase (kCN) was comparatively evaluated for the three types of soils. The results show that the prediction of KOC from kCN and KOW is only applicable to some specific types of soils. The results obtained in the present study proved that the SCLC method is appropriate for the KOC prediction for different types of soils, however the applicability of using hydrophobic parameters to predict KOC largely depends on the properties of soil concerned.

Elemental Concentrations in Urban Green Stormwater Infrastructure Soils.

PubMed

Kondo, Michelle C; Sharma, Raghav; Plante, Alain F; Yang, Yunwen; Burstyn, Igor

2016-01-01

Green stormwater infrastructure (GSI) is designed to capture stormwater for infiltration, detention, evapotranspiration, or reuse. Soils play a key role in stormwater interception at these facilities. It is important to assess whether contamination is occurring in GSI soils because urban stormwater drainage areas often accumulate elements of concern. Soil contamination could affect hydrologic and ecosystem functions. Maintenance workers and the public may also be exposed to GSI soils. We investigated soil elemental concentrations, categorized as macro- and micronutrients, heavy metals, and other elements, at 59 GSI sites in the city of Philadelphia. Non-GSI soil samples 3 to 5 m upland of GSI sites were used for comparison. We evaluated differences in elemental composition in GSI and non-GSI soils; the comparisons were corrected for the age of GSI facility, underlying soil type, street drainage, and surrounding land use. Concentrations of Ca and I were greater than background levels at GSI sites. Although GSI facilities appear to accumulate Ca and I, these elements do not pose a significant human health risk. Elements of concern to human health, including Cd, Hg, and Pb, were either no different or were lower in GSI soils compared with non-GSI soils. However, mean values found across GSI sites were up to four times greater than soil cleanup objectives for residential use. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

The Effects of Various Amendments on Trace Element Stabilization in Acidic, Neutral, and Alkali Soil with Similar Pollution Index

PubMed Central

Kim, Min-Suk; Min, Hyun-Gi; Lee, Sang-Hwan; Kim, Jeong-Gyu

2016-01-01

Many studies have examined the application of soil amendments, including pH change-induced immobilizers, adsorbents, and organic materials, for soil remediation. This study evaluated the effects of various amendments on trace element stabilization and phytotoxicity, depending on the initial soil pH in acid, neutral, and alkali conditions. As in all types of soils, Fe and Ca were well stabilized on adsorption sites. There was an effect from pH control or adsorption mechanisms on the stabilization of cationic trace elements from inorganic amendments in acidic and neutral soil. Furthermore, acid mine drainage sludge has shown great potential for stabilizing most trace elements. In a phytotoxicity test, the ratio of the bioavailable fraction to the pseudo-total fraction significantly affected the uptake of trace elements by bok choy. While inorganic amendments efficiently decreased the bioavailability of trace elements, significant effects from organic amendments were not noticeable due to the short-term cultivation period. Therefore, the application of organic amendments for stabilizing trace elements in agricultural soil requires further study. PMID:27835687

Toxicological benchmarks for screening potential contaminants of concern for effects on soil and litter invertebrates and heterotrophic process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Will, M.E.; Suter, G.W. II

1994-09-01

One of the initial stages in ecological risk assessments for hazardous waste sites is the screening of contaminants to determine which of them are worthy of further consideration as {open_quotes}contaminants of potential concern.{close_quotes} This process is termed {open_quotes}contaminant screening.{close_quotes} It is performed by comparing measured ambient concentrations of chemicals to benchmark concentrations. Currently, no standard benchmark concentrations exist for assessing contaminants in soil with respect to their toxicity to soil- and litter-dwelling invertebrates, including earthworms, other micro- and macroinvertebrates, or heterotrophic bacteria and fungi. This report presents a standard method for deriving benchmarks for this purpose, sets of data concerningmore » effects of chemicals in soil on invertebrates and soil microbial processes, and benchmarks for chemicals potentially associated with United States Department of Energy sites. In addition, literature describing the experiments from which data were drawn for benchmark derivation. Chemicals that are found in soil at concentrations exceeding both the benchmarks and the background concentration for the soil type should be considered contaminants of potential concern.« less

The Effects of Various Amendments on Trace Element Stabilization in Acidic, Neutral, and Alkali Soil with Similar Pollution Index.

PubMed

Kim, Min-Suk; Min, Hyun-Gi; Lee, Sang-Hwan; Kim, Jeong-Gyu

2016-01-01

Many studies have examined the application of soil amendments, including pH change-induced immobilizers, adsorbents, and organic materials, for soil remediation. This study evaluated the effects of various amendments on trace element stabilization and phytotoxicity, depending on the initial soil pH in acid, neutral, and alkali conditions. As in all types of soils, Fe and Ca were well stabilized on adsorption sites. There was an effect from pH control or adsorption mechanisms on the stabilization of cationic trace elements from inorganic amendments in acidic and neutral soil. Furthermore, acid mine drainage sludge has shown great potential for stabilizing most trace elements. In a phytotoxicity test, the ratio of the bioavailable fraction to the pseudo-total fraction significantly affected the uptake of trace elements by bok choy. While inorganic amendments efficiently decreased the bioavailability of trace elements, significant effects from organic amendments were not noticeable due to the short-term cultivation period. Therefore, the application of organic amendments for stabilizing trace elements in agricultural soil requires further study.

Metal Distribution in Urban Agricultural Soils in the Inland Empire, California

NASA Astrophysics Data System (ADS)

Marin, C. C. E.

2015-12-01

Urban environments exhibit unique biogeochemistry due to the presence of a myriad of anthropogenic sources of contaminants. One potential route through which humans have been exposed to metal contaminants is the ingestion of food produced on urban soils. The Inland Empire is a metropolitan located in semi-arid region of Southern California with greater than 4 million residents, where the growing population is demonstrating an increase in citizen participation in contributing to expanding local food systems. In response to the demand for locally grown produce, the Inland Empire is undergoing rapid land use change, where large tracts of land on the periphery of cities, including Riverside, are being converted or set aside for urban agriculture, though the quality of the soil for food production is unknown. At the same time, smaller gardens and farms are growing in number within the more densely populated areas. Assessing the quality of urban soil currently used for food production in this region can aid in projecting how land use change will affect the quality of crops produced as urban agriculture continues to expand in arid regions. Soil samples were taken from a variety of land use types, including areas currently producing crops and areas set aside for future large scale food production. Samples were collected at the surface (0-2 cm) and below till depth (20-22 cm). These soils were analyzed for total carbon including organic and inorganic carbon fractions, total nitrogen, bulk metal and trace metal concentrations (including As, Mn, Cr, Pb, Cd, Zn, and Cu). To approximate the mobility of the trace elements under various conditions, extraction tests were also performed, including EPA Pb bioavailability analysis. Finally, we utilize statistical tools and spatial analysis to illustrate the relationship between previous land use, current land use, and soil quality for urban crop production.

The Role of Soil Organic Matter, Nutrients, and Microbial Community Structure on the Performance of Microbial Fuel Cells

NASA Astrophysics Data System (ADS)

Rooney-Varga, J. N.; Dunaj, S. J.; Vallino, J. J.; Hines, M. E.; Gay, M.; Kobyljanec, C.

2011-12-01

Microbial fuel cells (MFCs) offer the potential for generating electricity, mitigating greenhouse gas emissions, and bioremediating pollutants through utilization of a plentiful, natural, and renewable resource: soil organic carbon. In the current study, we analyzed microbial community structure, MFC performance, and soil characteristics in different microhabitats (bulk soil, anode, and cathode) within MFCs constructed from agricultural or forest soils in order to determine how soil type and microbial dynamics influence MFC performance. MFCs were constructed with soils from agricultural and hardwood forest sites at Harvard Forest (Petersham, MA). The bulk soil characteristics were analyzed, including polyphenols, short chain fatty acids, total organic C and N, abiotic macronutrients, N and P mineralization rates, CO2 respiration rates, and MFC power output. Microbial community structure of the anodes, cathodes, and bulk soils was determined with molecular fingerprinting methods, which included terminal restriction length polymorphism (T-RFLP) analysis and 16S rRNA gene sequencing analysis. Our results indicated that MFCs constructed from agricultural soil had power output about 17 times that of forest soil-based MFCs and respiration rates about 10 times higher than forest soil MFCs. Agricultural soil MFCs had lower C:N ratios, polyphenol content, and acetate concentrations than forest soil MFCs, suggesting that active agricultural MFC microbial communities were supported by higher quality organic carbon. Microbial community profile data indicate that the microbial communities at the anode of the high power MFCs were less diverse than in low power MFCs and were dominated by Deltaproteobacteria, Geobacter, and, to a lesser extent, Clostridia, while low-power MFC anode communities were dominated by Clostridia. These data suggest that the presence of organic carbon substrate (acetate) was not the major limiting factor in selecting for highly electrogenic microbial communities, while the quality of available organic matter may have played a significant role in supporting high performing microbial communities.

Evaluation of Soil Salinity Amelioration Technologies in Timpaki, Crete

NASA Astrophysics Data System (ADS)

Panagea, Ioanna; Daliakopoulos, Ioannis; Tsanis, Ioannis; Schwilch, Gudrun

2015-04-01

Salinization is a soil threat that adversely affects ecosystem services and diminishes soil functions in many arid and semi-arid regions. Soil salinity management depends on a range of factors, and can be complex expensive and time demanding. Besides taking no action, possible management strategies include amelioration and adaptation measures. The WOCAT Technologies Questionnaire is a standardized methodology for monitoring, evaluating and documenting sustainable land management practices through interaction with the stakeholders. Here we use WOCAT for the systematic analysis and evaluation of soil salinization amelioration measures, for the RECARE project Case Study in Greece, the Timpaki basin, a semi-arid region in south-central Crete where the main land use is horticulture in greenhouses irrigated by groundwater. Excessive groundwater abstractions have resulted in a drop of the groundwater level in the coastal part of the aquifer, thus leading to seawater intrusion and in turn to soil salinization due to irrigation with brackish water. Amelioration technologies that have already been applied in the case study by the stakeholders are examined and classified depending on the function they promote and/or improve. The documented technologies are evaluated for their impacts on ecosystem services, cost and input requirements. Preliminary results show that technologies which promote maintaining existing crop types while enhancing productivity and decreasing soil salinity such as composting, mulching, rain water harvesting and seed biopriming are preferred by the stakeholders. Further work will include result validation using qualitative approaches. Keywords: soil salinity; salinization; evaluation of soil salinization amelioration techniques; WOCAT; RECARE FP7 project; Timpaki Crete

Modeling Effects of Temperature, Soil, Moisture, Nutrition and Variety As Determinants of Severity of Pythium Damping-Off and Root Disease in Subterranean Clover

PubMed Central

You, Ming P.; Rensing, Kelly; Renton, Michael; Barbetti, Martin J.

2017-01-01

Subterranean clover (Trifolium subterraneum) is a critical pasture legume in Mediterranean regions of southern Australia and elsewhere, including Mediterranean-type climatic regions in Africa, Asia, Australia, Europe, North America, and South America. Pythium damping-off and root disease caused by Pythium irregulare is a significant threat to subterranean clover in Australia and a study was conducted to define how environmental factors (viz. temperature, soil type, moisture and nutrition) as well as variety, influence the extent of damping-off and root disease as well as subterranean clover productivity under challenge by this pathogen. Relationships were statistically modeled using linear and generalized linear models and boosted regression trees. Modeling found complex relationships between explanatory variables and the extent of Pythium damping-off and root rot. Linear modeling identified high-level (4 or 5-way) significant interactions for each dependent variable (dry shoot and root weight, emergence, tap and lateral root disease index). Furthermore, all explanatory variables (temperature, soil, moisture, nutrition, variety) were found significant as part of some interaction within these models. A significant five-way interaction between all explanatory variables was found for both dry shoot and root dry weights, and a four way interaction between temperature, soil, moisture, and nutrition was found for both tap and lateral root disease index. A second approach to modeling using boosted regression trees provided support for and helped clarify the complex nature of the relationships found in linear models. All explanatory variables showed at least 5% relative influence on each of the five dependent variables. All models indicated differences due to soil type, with the sand-based soil having either higher weights, greater emergence, or lower disease indices; while lowest weights and less emergence, as well as higher disease indices, were found for loam soil and low temperature. There was more severe tap and lateral root rot disease in higher moisture situations. PMID:29184544

A Geostatistical Toolset for Reconstructing Louisiana's Coastal Stratigraphy using Subsurface Boring and Cone Penetrometer Test Data

NASA Astrophysics Data System (ADS)

Li, A.; Tsai, F. T. C.; Jafari, N.; Chen, Q. J.; Bentley, S. J.

2017-12-01

A vast area of river deltaic wetlands stretches across southern Louisiana coast. The wetlands are suffering from a high rate of land loss, which increasingly threats coastal community and energy infrastructure. A regional stratigraphic framework of the delta plain is now imperative to answer scientific questions (such as how the delta plain grows and decays?) and to provide information to coastal protection and restoration projects (such as marsh creation and construction of levees and floodwalls). Through years, subsurface investigations in Louisiana have been conducted by state and federal agencies (Louisiana Department of Natural Resources, United States Geological Survey, United States Army Corps of Engineers, etc.), research institutes (Louisiana Geological Survey, LSU Coastal Studies Institute, etc.), engineering firms, and oil-gas companies. This has resulted in the availability of various types of data, including geological, geotechnical, and geophysical data. However, it is challenging to integrate different types of data and construct three-dimensional stratigraphy models in regional scale. In this study, a set of geostatistical methods were used to tackle this problem. An ordinary kriging method was used to regionalize continuous data, such as grain size, water content, liquid limit, plasticity index, and cone penetrometer tests (CPTs). Indicator kriging and multiple indicator kriging methods were used to regionalize categorized data, such as soil classification. A compositional kriging method was used to regionalize compositional data, such as soil composition (fractions of sand, silt and clay). Stratigraphy models were constructed for three cases in the coastal zone: (1) Inner Harbor Navigation Canal (IHNC) area: soil classification and soil behavior type (SBT) stratigraphies were constructed using ordinary kriging; (2) Middle Barataria Bay area: a soil classification stratigraphy was constructed using multiple indicator kriging; (3) Lower Barataria Bay and Lower Breton Sound areas: a soil texture stratigraphy was constructed using soil compositional data and compositional kriging. Cross sections were extracted from the three-dimensional stratigraphy models to reveal spatial distributions of different stratigraphic features.

Time-dependent changes of zinc speciation in four soils contaminated with zincite or sphalerite.

PubMed

Voegelin, Andreas; Jacquat, Olivier; Pfister, Sabina; Barmettler, Kurt; Scheinost, Andreas C; Kretzschmar, Ruben

2011-01-01

The long-term speciation of Zn in contaminated soils is strongly influenced by soil pH, clay, and organic matter content as well as Zn loading. In addition, the type of Zn-bearing contaminant entering the soil may influence the subsequent formation of pedogenic Zn species, but systematic studies on such effects are currently lacking. We therefore conducted a soil incubation study in which four soils, ranging from strongly acidic to calcareous, were spiked with 2000 mg/kg Zn using either ZnO (zincite) or ZnS (sphalerite) as the contamination source. The soils were incubated under aerated conditions in moist state for up to four years. The extractability and speciation of Zn were assessed after one, two, and four years using extractions with 0.01 M CaCl(2) and Zn K-edge X-ray absorption fine structure (XAFS) spectroscopy, respectively. After four years, more than 90% of the added ZnO were dissolved in all soils, with the fastest dissolution occurring in the acidic soils. Contamination with ZnO favored the formation of Zn-bearing layered double hydroxides (LDH), even in acidic soils, and to a lesser degree Zn-phyllosilicates and adsorbed Zn species. This was explained by locally elevated pH and high Zn concentrations around dissolving ZnO particles. Except for the calcareous soil, ZnS dissolved more slowly than ZnO, reaching only 26 to 75% of the added ZnS after four years. ZnS dissolved more slowly in the two acidic soils than in the near-neutral and the calcareous soil. Also, the resulting Zn speciation was markedly different between these two pairs of soils: Whereas Zn bound to hydroxy-interlayered clay minerals (HIM) and octahedrally coordinated Zn sorption complexes prevailed in the two acidic soils, Zn speciation in the neutral and the calcareous soil was dominated by Zn-LDH and tetrahedrally coordinated inner-sphere Zn complexes. Our results show that the type of Zn-bearing contaminant phase can have a significant influence on the formation of pedogenic Zn species in soils. Important factors include the rate of Zn release from the contaminant phases and effects of the contaminant phase on bulk soil properties and on local chemical conditions around weathering contaminant particles.

Impact of Environmental Factors and Biological Soil Crust Types on Soil Respiration in a Desert Ecosystem

PubMed Central

Feng, Wei; Zhang, Yuqing; Jia, Xin; Wu, Bin; Zha, Tianshan; Qin, Shugao; Wang, Ben; Shao, Chenxi; Liu, Jiabin; Fa, Keyu

2014-01-01

The responses of soil respiration to environmental conditions have been studied extensively in various ecosystems. However, little is known about the impacts of temperature and moisture on soils respiration under biological soil crusts. In this study, CO2 efflux from biologically-crusted soils was measured continuously with an automated chamber system in Ningxia, northwest China, from June to October 2012. The highest soil respiration was observed in lichen-crusted soil (0.93±0.43 µmol m−2 s−1) and the lowest values in algae-crusted soil (0.73±0.31 µmol m−2 s−1). Over the diurnal scale, soil respiration was highest in the morning whereas soil temperature was highest in the midday, which resulted in diurnal hysteresis between the two variables. In addition, the lag time between soil respiration and soil temperature was negatively correlated with the soil volumetric water content and was reduced as soil water content increased. Over the seasonal scale, daily mean nighttime soil respiration was positively correlated with soil temperature when moisture exceeded 0.075 and 0.085 m3 m−3 in lichen- and moss-crusted soil, respectively. However, moisture did not affect on soil respiration in algae-crusted soil during the study period. Daily mean nighttime soil respiration normalized by soil temperature increased with water content in lichen- and moss-crusted soil. Our results indicated that different types of biological soil crusts could affect response of soil respiration to environmental factors. There is a need to consider the spatial distribution of different types of biological soil crusts and their relative contributions to the total C budgets at the ecosystem or landscape level. PMID:25050837

Estimating Setup of Driven Piles into Louisiana Clayey Soils

DOT National Transportation Integrated Search

2009-11-15

Two types of mathematical models for pile setup prediction, the Skov-Denver model and the newly developed rate-based model, have been established from all the dynamic and static testing data, including restrikes of the production piles, restrikes, st...

Estimating setup of driven piles into Louisiana clayey soils.

DOT National Transportation Integrated Search

2010-11-15

Two types of mathematical models for pile setup prediction, the Skov-Denver model and the newly developed rate-based model, have been established from all the dynamic and static testing data, including restrikes of the production piles, restrikes, st...

Mycorrhizal diversity in the rhizosphere of sugarcane and grass on different soil types

NASA Astrophysics Data System (ADS)

Ratri Cahyani, Vita; Rastikawati, Dewi; Yuniardi, Nestri; Syamsiyah, Jauhari; Suntoro

2017-11-01

Mycorrhiza has been known well as beneficial microbiota for supporting plant growth and production. Understanding of the variability and the consistency of the mycorrhizal diversity on various habitats is important for developing mycorrhizal utilization. Mycorrhizal diversity in the rhizosphere of sugarcane from 4 (four) soil types and the rhizosphere of grass from 3 (three) soil types were investigated in the present study. The results showed that Glomus indicated as a versatile genus because it was found as a common and dominant genus in the sugarcane rhizosphere on all of four soil types (Alfisol, Andisol, Inceptisol, Vertisol) and in the grass rhizosphere on all of three soil types (Ultisol, Oxisol, Histosol). In addition, Acaulospora was found as a common genus in grass rhizosphere. Statistical analysis indicated that P availability in the rhizosphere of sugarcane had a significantly negative correlation with mycorrhizal spore density, in which decreasing P availability significantly related with increasing spore density.

Spatial pattern and heterogeneity of soil moisture along a transect in a small catchment on the Loess Plateau

NASA Astrophysics Data System (ADS)

Yang, Yang; Dou, Yanxing; Liu, Dong; An, Shaoshan

2017-07-01

Spatial pattern and heterogeneity of soil moisture is important for the hydrological process on the Loess Plateau. This study combined the classical and geospatial statistical techniques to examine the spatial pattern and heterogeneity of soil moisture along a transect scale (e.g. land use types and topographical attributes) on the Loess Plateau. The average values of soil moisture were on the order of farmland > orchard > grassland > abandoned land > shrubland > forestland. Vertical distribution characteristics of soil moisture (0-500 cm) were similar among land use types. Highly significant (p < 0.01) negative correlations were found between soil moisture and elevation (h) except for shrubland (p > 0.05), whereas no significant correlations were found between soil moisture and plan curvature (Kh), stream power index (SPI), compound topographic index (CTI) (p > 0.05), indicating that topographical attributes (mainly h) have a negative effect on the soil moisture spatial heterogeneity. Besides, soil moisture spatial heterogeneity decreased from forestland to grassland and farmland, accompanied by a decline from 15° to 1° alongside upper to lower slope position. This study highlights the importance of land use types and topographical attributes on the soil moisture spatial heterogeneity from a combined analysis of the structural equation model (SEM) and generalized additive models (GAMs), and the relative contribution of land use types to the soil moisture spatial heterogeneity was higher than that of topographical attributes, which provides insights for researches focusing on soil moisture varitions on the Loess Plateau.

Thermal properties of degraded lowland peat-moorsh soils

NASA Astrophysics Data System (ADS)

Gnatowski, Tomasz

2016-04-01

Soil thermal properties, i.e.: specific heat capacity (c), thermal conductivity (K), volumetric heat capacity (C) govern the thermal environment and heat transport through the soil. Hence the precise knowledge and accurate predictions of these properties for peaty soils with high amount of organic matter are especially important for the proper forecasting of soil temperature and thus it may lead to a better assessment of the greenhouse gas emissions created by microbiological activity of the peatlands. The objective of the study was to develop the predictive models of the selected thermal parameters of peat-moorsh soils in terms of their potential applicability for forecasting changes of soil temperature in degraded ecosystems of the Middle Biebrza River Valley area. Evaluation of the soil thermal properties was conducted for the parameters: specific heat capacity (c), volumetric heat capacities of the dry and saturated soil (Cdry, Csat) and thermal conductivities of the dry and saturated soil (Kdry, Ksat). The thermal parameters were measured using the dual-needle probe (KD2-Pro) on soil samples collected from seven peaty soils, representing total 24 horizons. The surface layers were characterized by different degrees of advancement of soil degradation dependent on intensiveness of the cultivation practises (peaty and humic moorsh). The underlying soil layers contain peat deposits of different botanical composition (peat-moss, sedge-reed, reed and alder) and varying degrees of decomposition of the organic matter, from H1 to H7 (von Post scale). Based on the research results it has been shown that the specific heat capacity of the soils differs depending on the type of soil (type of moorsh and type of peat). The range of changes varied from 1276 J.kg-1.K-1 in the humic moorsh soil to 1944 J.kg-1.K-1 in the low decomposed sedge-moss peat. It has also been stated that in degraded peat soils with the increasing of the ash content in the soil the value of specific heat has decreased in a non-linear manner. Thermal parameters of the dry mass of the studied soils (Kdry, Cdry) were characterised by the mean value of approximately 0.11±0.028 W.m-1.K-1 and 0.781±0.220 MJ.m-3.K-1. The application of the correlation analysis showed that the most significant predictor of these properties of soils is the soil bulk density which, respectively explains: 54.6% and 67.1% of their variation. The increase of the accuracy in determining Kdry and Cdry was obtained by developing regression models, which apart from the bulk density also include the chemical properties of the peat soils. In the fully saturated soil the Ksat value ranged from 0.47 to 0.63 W.m-1.K-1, and the Csat varied from 3.200 to 3.995 MJ.m-3.K-1. The variation coefficients of these soil thermal features are at the level of approx. 5%. The obtained results allowed to conclude that the significant diversity of studied soils doesn't cause the significant differences in thermal soil parameters in fully saturated soils. The developed statistical relationships indicate that parameters Ksat and Csat were poorly correlated with saturated moisture content.

Multispectral determination of soil moisture-2. [Guymon, Oklahoma and Dalhart, Texas

NASA Technical Reports Server (NTRS)

Estes, J. E.; Simonett, D. S. (Principal Investigator); Hajic, E. J.; Hilton, B. M.; Lees, R. D.

1982-01-01

Soil moisture data obtained using scatterometers, modular multispectral scanners and passive microwave radiometers were revised and grouped into four field cover types for statistical anaysis. Guymon data are grouped as alfalfa, bare, milo with rows perpendicular to the field view, and milo viewed parallel to the field of view. Dalhart data are grouped as bare combo, stubble, disked stubble, and corn field. Summary graphs combine selected analyses to compare the effects of field cover. The analysis for each of the cover types is presented in tables and graphs. Other tables show elementary statistics, correlation matrices, and single variable regressions. Selected eigenvectors and factor analyses are included and the highest correlating sensor typs for each location are summarized.

[Development of APSIM (agricultural production systems simulator) and its application].

PubMed

Shen, Yuying; Nan, Zhibiao; Bellotti, Bill; Robertson, Michael; Chen, Wen; Shao, Xinqing

2002-08-01

Soil-crop simulator model is an effective tool for providing decision on agricultural management. APSIM (Agricultural Production Systems Simulator) was developed to simulate the biophysical process in farming system, and particularly in the economic and ecological features of the systems under climatic risk. The current literatures revealed that APSIM could be applied in wide zone, including temperate continental, temperate maritime, sub-tropic and arid climate, and Mediterranean climates, with the soil type of clay, duplex soil, vertisol, silt sandy, silt loam and silt clay loam. More than 20 crops have been simulated well. APSIM is powerful on describing crop structure, crop sequence, yield prediction, and quality control as well as erosion estimation under different planting pattern.

Slope stability problems associated with timber harvesting in mountainous regions of the western United States.

Treesearch

D.N. Swanston

1974-01-01

Natural soil-mass-movements on forested slopes in the Western United States can be divided into two major groups of closely related landslide types. These include, in order of decreasing importance and regional frequency of occurrence: (1) debris slides, debris avalanches, debris flows, and debris torrents; and (2) creep, slumps, and earth flows. Each type requires the...

Investigation of vertical transportation of Cs-137 in the different soil types and for the different raining regime

NASA Astrophysics Data System (ADS)

Varinlioglu, Ahmet; Tugrul, A. Beril

2018-02-01

Cs-137 is an important fission product that is produced in the nuclear reactors. Therefore it can create risk for the environment during the accident condition of the nuclear plants. In this study, vertical transportation of Cs-137 in the soil searched for three different soil types and three different raining regimes. The experiments observed in lyzimetric conditions in the laboratory. The results of the experiments show that in every raining regime the activities of different types of soils (sand, loam and clay) were related with descending activity order. When the results of the experiments were evaluated according to the raining regime it can be seen that the relative activity for every type of soil is always towards higher to lower raining conditions.

Change Analysis on Soil Erosion of Fujian Province from 1990 TO 2015

NASA Astrophysics Data System (ADS)

Wang, X. Q.; Zeng, S. J.; Chen, X. G.; Lin, J. L.; Chen, S. M.

2017-09-01

Soil erosion is one of major environment problems in the world, and China is one of the most serious soil erosion country. In this paper, Fujian province was used as a study area for its typical red soil region. Based on USLE model, the soil erosion modulus in 1990 and 2015 were calculated and turned to soil erosion intensity. The soil erosion distribution trend in Fujian province was decrease from south-east coastal zone to north-west inland region. In soil erosion areas, the main erosion type was light level with about 80 %, and the soil erosion levels above serious type were mainly sporadic distribution with less than 10 %. The soil erosion improved for the past 25 years. The areas of different erosion types all decreased, and the total erosion area reduced by 26.59 %. The improvement area mainly located in north-east, south and west region. The aggravation area mainly located in the north and some middle hilly regions. The impact of human activities is more significant for erosion control.

A computer program for the simulation of heat and moisture flow in soils

NASA Technical Reports Server (NTRS)

Camillo, P.; Schmugge, T. J.

1981-01-01

A computer program that simulates the flow of heat and moisture in soils is described. The space-time dependence of temperature and moisture content is described by a set of diffusion-type partial differential equations. The simulator uses a predictor/corrector to numerically integrate them, giving wetness and temperature profiles as a function of time. The simulator was used to generate solutions to diffusion-type partial differential equations for which analytical solutions are known. These equations include both constant and variable diffusivities, and both flux and constant concentration boundary conditions. In all cases, the simulated and analytic solutions agreed to within the error bounds which were imposed on the integrator. Simulations of heat and moisture flow under actual field conditions were also performed. Ground truth data were used for the boundary conditions and soil transport properties. The qualitative agreement between simulated and measured profiles is an indication that the model equations are reasonably accurate representations of the physical processes involved.

Comparing hiking, mountain biking and horse riding impacts on vegetation and soils in Australia and the United States of America.

PubMed

Pickering, Catherine Marina; Hill, Wendy; Newsome, David; Leung, Yu-Fai

2010-01-01

Hiking, horse riding and mountain biking are popular in protected areas in Australia and the United States of America. To help inform the often contentious deliberations about use of protected areas for these three types of activities, we review recreation ecology research in both countries. Many impacts on vegetation, soils and trails are similar for the three activities, although there can be differences in severity. Impacts include damage to existing trails, soil erosion, compaction and nutrification, changes in hydrology, trail widening, exposure of roots, rocks and bedrock. There can be damage to plants including reduction in vegetation height and biomass, changes in species composition, creation of informal trails and the spread of weeds and plant pathogens. Due to differences in evolutionary history, impacts on soil and vegetation can be greater in Australia than in the USA. There are specific social and biophysical impacts of horses such as those associated with manure and urine, grazing and the construction and use of tethering yards and fences. Mountain bike specific impacts include soil and vegetation damage from skidding and the construction of unauthorised trails, jumps, bridges and other trail technical features. There are gaps in the current research that should be filled by additional research: (1) on horse and mountain bike impacts to complement those on hiking. The methods used need to reflect patterns of actual usage and be suitable for robust statistical analysis; (2) that directly compares types and severity of impacts among activities; and (3) on the potential for each activity to contribute to the spread of weeds and plant pathogens. Additional research will assist managers and users of protected areas in understanding the relative impacts of these activities, and better ways to manage them. It may not quell the debates among users, managers and conservationists, but it will help put it on a more scientific footing. 2009 Elsevier Ltd. All rights reserved.

Ash effects on the thermal conductivity of a mediterranean loam soil

NASA Astrophysics Data System (ADS)

Rubio, Carles; Pereira, Paulo; Ubeda, Xavier

2014-05-01

The purpose of this work is to explore the variability on the soil thermal conductivity for a burnt soil and assessing the effects of the ashes on the heat transfer when they were incorporated into the soil matrix. A set of 42 soil samples from the Montgrí massif experimental plot between surface and 5 cm depth was collected before and after the soil was burnt. A thermal characterization of the soil was carried out. For that a dry out curve was constructed, which presented the relationship between water content and thermal conductivity for both types of soil samples, burnt and non-burnt soil. The results shown changes in the heat pulse transfer, being more conductive the soil before to be burnt (0.378 W•m-1•C-1) than the soil after to be exposed to the fire (0.337 W•m-1•C-1). Indeed, on the whole of moisture scenarios the values of thermal conductivity decreased after soil was burnt. Another experimental concern was based on to observe the soil thermal behaviour when ash collected after fire was incorporated into the burnt soil matrix. In this case, soil thermal and soil hydrodynamic behaviour presented differences according to the type of ash. Soil mixed with fly ash showed higher thermal conductivity than soil mixed with bottom ash. To sum up; the soil thermal conductivity decreased when soil was burnt. On the other hand, soil thermal conductivity shown differences depending on the type of ash incorporated into the matrix. Fly ash transferred the heat pulse better than bottom ash.