Sample records for spatial scale comparable

  1. A scale-invariant change detection method for land use/cover change research

    NASA Astrophysics Data System (ADS)

    Xing, Jin; Sieber, Renee; Caelli, Terrence

    2018-07-01

    Land Use/Cover Change (LUCC) detection relies increasingly on comparing remote sensing images with different spatial and spectral scales. Based on scale-invariant image analysis algorithms in computer vision, we propose a scale-invariant LUCC detection method to identify changes from scale heterogeneous images. This method is composed of an entropy-based spatial decomposition, two scale-invariant feature extraction methods, Maximally Stable Extremal Region (MSER) and Scale-Invariant Feature Transformation (SIFT) algorithms, a spatial regression voting method to integrate MSER and SIFT results, a Markov Random Field-based smoothing method, and a support vector machine classification method to assign LUCC labels. We test the scale invariance of our new method with a LUCC case study in Montreal, Canada, 2005-2012. We found that the scale-invariant LUCC detection method provides similar accuracy compared with the resampling-based approach but this method avoids the LUCC distortion incurred by resampling.

  2. Comparison of MODIS and SWAT evapotranspiration over a complex terrain at different spatial scales

    NASA Astrophysics Data System (ADS)

    Abiodun, Olanrewaju O.; Guan, Huade; Post, Vincent E. A.; Batelaan, Okke

    2018-05-01

    In most hydrological systems, evapotranspiration (ET) and precipitation are the largest components of the water balance, which are difficult to estimate, particularly over complex terrain. In recent decades, the advent of remotely sensed data based ET algorithms and distributed hydrological models has provided improved spatially upscaled ET estimates. However, information on the performance of these methods at various spatial scales is limited. This study compares the ET from the MODIS remotely sensed ET dataset (MOD16) with the ET estimates from a SWAT hydrological model on graduated spatial scales for the complex terrain of the Sixth Creek Catchment of the Western Mount Lofty Ranges, South Australia. ET from both models was further compared with the coarser-resolution AWRA-L model at catchment scale. The SWAT model analyses are performed on daily timescales with a 6-year calibration period (2000-2005) and 7-year validation period (2007-2013). Differences in ET estimation between the SWAT and MOD16 methods of up to 31, 19, 15, 11 and 9 % were observed at respectively 1, 4, 9, 16 and 25 km2 spatial resolutions. Based on the results of the study, a spatial scale of confidence of 4 km2 for catchment-scale evapotranspiration is suggested in complex terrain. Land cover differences, HRU parameterisation in AWRA-L and catchment-scale averaging of input climate data in the SWAT semi-distributed model were identified as the principal sources of weaker correlations at higher spatial resolution.

  3. Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field

    NASA Technical Reports Server (NTRS)

    Franklin, Rima B.; Mills, Aaron L.

    2003-01-01

    To better understand the distribution of soil microbial communities at multiple spatial scales, a survey was conducted to examine the spatial organization of community structure in a wheat field in eastern Virginia (USA). Nearly 200 soil samples were collected at a variety of separation distances ranging from 2.5 cm to 11 m. Whole-community DNA was extracted from each sample, and community structure was compared using amplified fragment length polymorphism (AFLP) DNA fingerprinting. Relative similarity was calculated between each pair of samples and compared using geostatistical variogram analysis to study autocorrelation as a function of separation distance. Spatial autocorrelation was found at scales ranging from 30 cm to more than 6 m, depending on the sampling extent considered. In some locations, up to four different correlation length scales were detected. The presence of nested scales of variability suggests that the environmental factors regulating the development of the communities in this soil may operate at different scales. Kriging was used to generate maps of the spatial organization of communities across the plot, and the results demonstrated that bacterial distributions can be highly structured, even within a habitat that appears relatively homogeneous at the plot and field scale. Different subsets of the microbial community were distributed differently across the plot, and this is thought to be due to the variable response of individual populations to spatial heterogeneity associated with soil properties. c2003 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.

  4. Spatial and temporal variability in forest growth in the Olympic Mountains, Washington: sensitivity to climatic variability.

    Treesearch

    Melisa L. Holman; David L. Peterson

    2006-01-01

    We compared annual basal area increment (BAI) at different spatial scales among all size classes and species at diverse locations in the wet western and dry northeastern Olympic Mountains. Weak growth correlations at small spatial scales (average R = 0.084-0.406) suggest that trees are responding to local growth conditions. However, significant...

  5. Explorative Function in Williams Syndrome Analyzed through a Large-Scale Task with Multiple Rewards

    ERIC Educational Resources Information Center

    Foti, F.; Petrosini, L.; Cutuli, D.; Menghini, D.; Chiarotti, F.; Vicari, S.; Mandolesi, L.

    2011-01-01

    This study aimed to evaluate spatial function in subjects with Williams syndrome (WS) by using a large-scale task with multiple rewards and comparing the spatial abilities of WS subjects with those of mental age-matched control children. In the present spatial task, WS participants had to explore an open space to search nine rewards placed in…

  6. Towards a More Biologically-meaningful Climate Characterization: Variability in Space and Time at Multiple Scales

    NASA Astrophysics Data System (ADS)

    Christianson, D. S.; Kaufman, C. G.; Kueppers, L. M.; Harte, J.

    2013-12-01

    Sampling limitations and current modeling capacity justify the common use of mean temperature values in summaries of historical climate and future projections. However, a monthly mean temperature representing a 1-km2 area on the landscape is often unable to capture the climate complexity driving organismal and ecological processes. Estimates of variability in addition to mean values are more biologically meaningful and have been shown to improve projections of range shifts for certain species. Historical analyses of variance and extreme events at coarse spatial scales, as well as coarse-scale projections, show increasing temporal variability in temperature with warmer means. Few studies have considered how spatial variance changes with warming, and analysis for both temporal and spatial variability across scales is lacking. It is unclear how the spatial variability of fine-scale conditions relevant to plant and animal individuals may change given warmer coarse-scale mean values. A change in spatial variability will affect the availability of suitable habitat on the landscape and thus, will influence future species ranges. By characterizing variability across both temporal and spatial scales, we can account for potential bias in species range projections that use coarse climate data and enable improvements to current models. In this study, we use temperature data at multiple spatial and temporal scales to characterize spatial and temporal variability under a warmer climate, i.e., increased mean temperatures. Observational data from the Sierra Nevada (California, USA), experimental climate manipulation data from the eastern and western slopes of the Rocky Mountains (Colorado, USA), projected CMIP5 data for California (USA) and observed PRISM data (USA) allow us to compare characteristics of a mean-variance relationship across spatial scales ranging from sub-meter2 to 10,000 km2 and across temporal scales ranging from hours to decades. Preliminary spatial analysis at fine-spatial scales (sub-meter to 10-meter) shows greater temperature variability with warmer mean temperatures. This is inconsistent with the inherent assumption made in current species distribution models that fine-scale variability is static, implying that current projections of future species ranges may be biased -- the direction and magnitude requiring further study. While we focus our findings on the cross-scaling characteristics of temporal and spatial variability, we also compare the mean-variance relationship between 1) experimental climate manipulations and observed conditions and 2) temporal versus spatial variance, i.e., variability in a time-series at one location vs. variability across a landscape at a single time. The former informs the rich debate concerning the ability to experimentally mimic a warmer future. The latter informs space-for-time study design and analyses, as well as species persistence via a combined spatiotemporal probability of suitable future habitat.

  7. A Spatial Framework to Map Heat Health Risks at Multiple Scales.

    PubMed

    Ho, Hung Chak; Knudby, Anders; Huang, Wei

    2015-12-18

    In the last few decades extreme heat events have led to substantial excess mortality, most dramatically in Central Europe in 2003, in Russia in 2010, and even in typically cool locations such as Vancouver, Canada, in 2009. Heat-related morbidity and mortality is expected to increase over the coming centuries as the result of climate-driven global increases in the severity and frequency of extreme heat events. Spatial information on heat exposure and population vulnerability may be combined to map the areas of highest risk and focus mitigation efforts there. However, a mismatch in spatial resolution between heat exposure and vulnerability data can cause spatial scale issues such as the Modifiable Areal Unit Problem (MAUP). We used a raster-based model to integrate heat exposure and vulnerability data in a multi-criteria decision analysis, and compared it to the traditional vector-based model. We then used the Getis-Ord G(i) index to generate spatially smoothed heat risk hotspot maps from fine to coarse spatial scales. The raster-based model allowed production of maps at spatial resolution, more description of local-scale heat risk variability, and identification of heat-risk areas not identified with the vector-based approach. Spatial smoothing with the Getis-Ord G(i) index produced heat risk hotspots from local to regional spatial scale. The approach is a framework for reducing spatial scale issues in future heat risk mapping, and for identifying heat risk hotspots at spatial scales ranging from the block-level to the municipality level.

  8. Exploring the effects of spatial autocorrelation when identifying key drivers of wildlife crop-raiding.

    PubMed

    Songhurst, Anna; Coulson, Tim

    2014-03-01

    Few universal trends in spatial patterns of wildlife crop-raiding have been found. Variations in wildlife ecology and movements, and human spatial use have been identified as causes of this apparent unpredictability. However, varying spatial patterns of spatial autocorrelation (SA) in human-wildlife conflict (HWC) data could also contribute. We explicitly explore the effects of SA on wildlife crop-raiding data in order to facilitate the design of future HWC studies. We conducted a comparative survey of raided and nonraided fields to determine key drivers of crop-raiding. Data were subsampled at different spatial scales to select independent raiding data points. The model derived from all data was fitted to subsample data sets. Model parameters from these models were compared to determine the effect of SA. Most methods used to account for SA in data attempt to correct for the change in P-values; yet, by subsampling data at broader spatial scales, we identified changes in regression estimates. We consequently advocate reporting both model parameters across a range of spatial scales to help biological interpretation. Patterns of SA vary spatially in our crop-raiding data. Spatial distribution of fields should therefore be considered when choosing the spatial scale for analyses of HWC studies. Robust key drivers of elephant crop-raiding included raiding history of a field and distance of field to a main elephant pathway. Understanding spatial patterns and determining reliable socio-ecological drivers of wildlife crop-raiding is paramount for designing mitigation and land-use planning strategies to reduce HWC. Spatial patterns of HWC are complex, determined by multiple factors acting at more than one scale; therefore, studies need to be designed with an understanding of the effects of SA. Our methods are accessible to a variety of practitioners to assess the effects of SA, thereby improving the reliability of conservation management actions.

  9. Effects of spatial resolution and landscape structure on land cover characterization

    NASA Astrophysics Data System (ADS)

    Yang, Wenli

    This dissertation addressed problems in scaling, problems that are among the main challenges in remote sensing. The principal objective of the research was to investigate the effects of changing spatial scale on the representation of land cover. A second objective was to determine the relationship between such effects, characteristics of landscape structure and scaling procedures. Four research issues related to spatial scaling were examined. They included: (1) the upscaling of Normalized Difference Vegetation Index (NDVI); (2) the effects of spatial scale on indices of landscape structure; (3) the representation of land cover databases at different spatial scales; and (4) the relationships between landscape indices and land cover area estimations. The overall bias resulting from non-linearity of NDVI in relation to spatial resolution is generally insignificant as compared to other factors such as influences of aerosols and water vapor. The bias is, however, related to land surface characteristics. Significant errors may be introduced in heterogeneous areas where different land cover types exhibit strong spectral contrast. Spatially upscaled SPOT and TM NDVIs have information content comparable with the AVHRR-derived NDVI. Indices of landscape structure and spatial resolution are generally related, but the exact forms of the relationships are subject to changes in other factors including the basic patch unit constituting a landscape and the proportional area of foreground land cover under consideration. The extent of agreement between spatially aggregated coarse resolution land cover datasets and full resolution datasets changes with the properties of the original datasets, including the pixel size and class definition. There are close relationships between landscape structure and class areas estimated from spatially aggregated land cover databases. The relationships, however, do not permit extension from one area to another. Inversion calibration across different geographic/ecological areas is, therefore, not feasible. Different rules govern the land cover area changes across resolutions when different upscaling methods are used. Special attention should be given to comparison between land cover maps derived using different methods.

  10. Quantifying drivers of wild pig movement across multiple spatial and temporal scales

    USGS Publications Warehouse

    Kay, Shannon L.; Fischer, Justin W.; Monaghan, Andrew J.; Beasley, James C; Boughton, Raoul; Campbell, Tyler A; Cooper, Susan M; Ditchkoff, Stephen S.; Hartley, Stephen B.; Kilgo, John C; Wisely, Samantha M; Wyckoff, A Christy; Vercauteren, Kurt C.; Pipen, Kim M

    2017-01-01

    The analytical framework we present can be used to assess movement patterns arising from multiple data sources for a range of species while accounting for spatio-temporal correlations. Our analyses show the magnitude by which reaction norms can change based on the temporal scale of response data, illustrating the importance of appropriately defining temporal scales of both the movement response and covariates depending on the intended implications of research (e.g., predicting effects of movement due to climate change versus planning local-scale management). We argue that consideration of multiple spatial scales within the same framework (rather than comparing across separate studies post-hoc) gives a more accurate quantification of cross-scale spatial effects by appropriately accounting for error correlation.

  11. The Relationship between Spatial and Temporal Magnitude Estimation of Scientific Concepts at Extreme Scales

    NASA Astrophysics Data System (ADS)

    Price, Aaron; Lee, H.

    2010-01-01

    Many astronomical objects, processes, and events exist and occur at extreme scales of spatial and temporal magnitudes. Our research draws upon the psychological literature, replete with evidence of linguistic and metaphorical links between the spatial and temporal domains, to compare how students estimate spatial and temporal magnitudes associated with objects and processes typically taught in science class.. We administered spatial and temporal scale estimation tests, with many astronomical items, to 417 students enrolled in 12 undergraduate science courses. Results show that while the temporal test was more difficult, students’ overall performance patterns between the two tests were mostly similar. However, asymmetrical correlations between the two tests indicate that students think of the extreme ranges of spatial and temporal scales in different ways, which is likely influenced by their classroom experience. When making incorrect estimations, students tended to underestimate the difference between the everyday scale and the extreme scales on both tests. This suggests the use of a common logarithmic mental number line for both spatial and temporal magnitude estimation. However, there are differences between the two tests in the errors student make in the everyday range. Among the implications discussed is the use of spatio-temporal reference frames, instead of smooth bootstrapping, to help students maneuver between scales of magnitude and the use of logarithmic transformations between reference frames. Implications for astronomy range from learning about spectra to large scale galaxy structure.

  12. Model simulations and proxy-based reconstructions for the European region in the past millennium (Invited)

    NASA Astrophysics Data System (ADS)

    Zorita, E.

    2009-12-01

    One of the objectives when comparing simulations of past climates to proxy-based climate reconstructions is to asses the skill of climate models to simulate climate change. This comparison may accomplished at large spatial scales, for instance the evolution of simulated and reconstructed Northern Hemisphere annual temperature, or at regional or point scales. In both approaches a 'fair' comparison has to take into account different aspects that affect the inevitable uncertainties and biases in the simulations and in the reconstructions. These efforts face a trade-off: climate models are believed to be more skillful at large hemispheric scales, but climate reconstructions are these scales are burdened by the spatial distribution of available proxies and by methodological issues surrounding the statistical method used to translate the proxy information into large-spatial averages. Furthermore, the internal climatic noise at large hemispheric scales is low, so that the sampling uncertainty tends to be also low. On the other hand, the skill of climate models at regional scales is limited by the coarse spatial resolution, which hinders a faithful representation of aspects important for the regional climate. At small spatial scales, the reconstruction of past climate probably faces less methodological problems if information from different proxies is available. The internal climatic variability at regional scales is, however, high. In this contribution some examples of the different issues faced when comparing simulation and reconstructions at small spatial scales in the past millennium are discussed. These examples comprise reconstructions from dendrochronological data and from historical documentary data in Europe and climate simulations with global and regional models. These examples indicate that the centennial climate variations can offer a reasonable target to assess the skill of global climate models and of proxy-based reconstructions, even at small spatial scales. However, as the focus shifts towards higher frequency variability, decadal or multidecadal, the need for larger simulation ensembles becomes more evident. Nevertheless,the comparison at these time scales may expose some lines of research on the origin of multidecadal regional climate variability.

  13. Spatially resolved Spectroscopy of Europa’s Large-scale Compositional Units at 3-4 μm with Keck NIRSPEC

    NASA Astrophysics Data System (ADS)

    Fischer, P. D.; Brown, M. E.; Trumbo, S. K.; Hand, K. P.

    2017-01-01

    We present spatially resolved spectroscopic observations of Europa’s surface at 3-4 μm obtained with the near-infrared spectrograph and adaptive optics system on the Keck II telescope. These are the highest quality spatially resolved reflectance spectra of Europa’s surface at 3-4 μm. The observations spatially resolve Europa’s large-scale compositional units at a resolution of several hundred kilometers. The spectra show distinct features and geographic variations associated with known compositional units; in particular, large-scale leading hemisphere chaos shows a characteristic longward shift in peak reflectance near 3.7 μm compared to icy regions. These observations complement previous spectra of large-scale chaos, and can aid efforts to identify the endogenous non-ice species.

  14. Ground and satellite based assessment of meteorological droughts: The Coello river basin case study

    NASA Astrophysics Data System (ADS)

    Cruz-Roa, A. F.; Olaya-Marín, E. J.; Barrios, M. I.

    2017-10-01

    The spatial distribution of droughts is a key factor for designing water management policies at basin scale in arid and semi-arid regions. Ground hydro-meteorological data in neo-tropical areas are scarce; therefore, the merging of ground and satellite datasets is a promissory approach for improving our understanding of water distribution. This paper compares three monthly rainfall interpolation methods for drought evaluation. The ordinary kriging technique based on ground data, and cokriging with elevation as auxiliary variable were compared against cokriging using the Tropical Rainfall Measuring Mission (TRMM) Multi-Satellite Precipitation Analysis (TMPA). Twenty rain gauge stations and the 3B42V7 version of the TMPA research dataset were considered. Comparisons were made over the Coello river basin (Colombia) at 3″ spatial resolution covering a period of eight years (1998-2005). The best spatial rainfall estimation was found for cokriging using ground data and elevation. The spatial support of TMPA dataset is very coarse for a merged interpolation with ground data, this spatial scales discrepancy highlight the need to consider scaling rules in the interpolation process.

  15. Effects of spatial habitat heterogeneity on habitat selection and annual fecundity for a migratory forest songbird

    USGS Publications Warehouse

    Cornell, K.L.; Donovan, T.M.

    2010-01-01

    Understanding how spatial habitat patterns influence abundance and dynamics of animal populations is a primary goal in landscape ecology. We used an information-theoretic approach to investigate the association between habitat patterns at multiple spatial scales and demographic patterns for black-throated blue warblers (Dendroica caerulescens) at 20 study sites in west-central Vermont, USA from 2002 to 2005. Sites were characterized by: (1) territory-scale shrub density, (2) patch-scale shrub density occurring within 25 ha of territories, and (3) landscape-scale habitat patterns occurring within 5 km radius extents of territories. We considered multiple population parameters including abundance, age ratios, and annual fecundity. Territory-scale shrub density was most important for determining abundance and age ratios, but landscape-scale habitat structure strongly influenced reproductive output. Sites with higher territory-scale shrub density had higher abundance, and were more likely to be occupied by older, more experienced individuals compared to sites with lower shrub density. However, annual fecundity was higher on sites located in contiguously forested landscapes where shrub density was lower than the fragmented sites. Further, effects of habitat pattern at one spatial scale depended on habitat conditions at different scales. For example, abundance increased with increasing territory-scale shrub density, but this effect was much stronger in fragmented landscapes than in contiguously forested landscapes. These results suggest that habitat pattern at different spatial scales affect demographic parameters in different ways, and that effects of habitat patterns at one spatial scale depends on habitat conditions at other scales. ?? Springer Science+Business Media B.V. 2009.

  16. Quantification of Spatial Heterogeneity in Old Growth Forst of Korean Pine

    Treesearch

    Wang Zhengquan; Wang Qingcheng; Zhang Yandong

    1997-01-01

    Spatial hetergeneity is a very important issue in studying functions and processes of ecological systems at various scales. Semivariogram analysis is an effective technique to summarize spatial data, and quantification of sptail heterogeneity. In this paper, we propose some principles to use semivariograms to characterize and compare spatial heterogeneity of...

  17. Space and time scales in human-landscape systems.

    PubMed

    Kondolf, G Mathias; Podolak, Kristen

    2014-01-01

    Exploring spatial and temporal scales provides a way to understand human alteration of landscape processes and human responses to these processes. We address three topics relevant to human-landscape systems: (1) scales of human impacts on geomorphic processes, (2) spatial and temporal scales in river restoration, and (3) time scales of natural disasters and behavioral and institutional responses. Studies showing dramatic recent change in sediment yields from uplands to the ocean via rivers illustrate the increasingly vast spatial extent and quick rate of human landscape change in the last two millennia, but especially in the second half of the twentieth century. Recent river restoration efforts are typically small in spatial and temporal scale compared to the historical human changes to ecosystem processes, but the cumulative effectiveness of multiple small restoration projects in achieving large ecosystem goals has yet to be demonstrated. The mismatch between infrequent natural disasters and individual risk perception, media coverage, and institutional response to natural disasters results in un-preparedness and unsustainable land use and building practices.

  18. Comparing riparian and catchment influences on stream habitat in a forested, montane landscape.

    Treesearch

    K.M. Burnett; G.H. Reeves

    2006-01-01

    The goal of this study was to understand relationships between salmon habitat and landscape characteristics, summarized at multiple spatial scales, in a montane basin where forestry is the dominant land use. Specific study objectives were to (1) examine differences among spatial scales for landscape characteristics described with relatively coarse-resolution data, (2)...

  19. Premixed Edge-Flames in Spatially-Varying Straining Flows

    NASA Technical Reports Server (NTRS)

    Liu, Jian-Bang; Ronney, Paul D.

    1999-01-01

    Flames subject to temporally and spatially uniform hydrodynamic strain are frequently used to model the local interactions of flame fronts with turbulent flow fields (Williams, 1985; Peters, 1986; Bradley, 1992). The applicability of laminar flamelet models in strongly turbulent flows have been questioned recently (Shay and Ronney, 1998) because in turbulent flows the strain rate (sigma) changes at rates comparable to sigma itself and the scale over which the flame front curvature and sigma changes is comparable to the curvature scale itself. Therefore quasi-static, local models of turbulent strain and curvature effects on laminar flamelets may not be accurate under conditions where the strain and curvature effects are most significant. The purpose of this study is to examine flames in spatially-varying strain and compare their properties to those of uniformly strained flames.

  20. A multi-scale methodology for comparing GCM and RCM results over the Eastern Mediterranean

    NASA Astrophysics Data System (ADS)

    Samuels, Rana; Krichak, Simon; Breitgand, Joseph; Alpert, Pinhas

    2010-05-01

    The importance of skillful climate modeling is increasingly being realized as results are being incorporated into environmental, economic, and even business planning. Global circulation models (GCMs) employed by the IPCC provide results at spatial scales of hundreds of kilometers, which is useful for understanding global trends but not appropriate for use as input into regional and local impacts models used to inform policy and development. To address this shortcoming, regional climate models (RCMs) which dynamically downscale the results of the GCMs are used. In this study we present first results of a dynamically downscaled RCM focusing on the Eastern Mediterranean region. For the historical 1960-2000 time period, results at a spatial scale of both 25 km and 50 km are compared with historical station data from 5 locations across Israel as well as with the results of 3 GCM models (ECHAM5, NOAA GFDL, and CCCMA) at annual, monthly and daily time scales. Results from a recently completed Japanese GCM at a spatial scale of 20 km are also included. For the historical validation period, we show that as spatial scale increases the skill in capturing annual and inter-annual temperature and rainfall also increases. However, for intra-seasonal rainfall characteristics important for hydrological and agricultural planning (eg. dry and wet spells, number of rain days) the GCM results (including the 20 km Japanese model) capture the historical trends better than the dynamically downscaled RegCM. For future scenarios of temperature and precipitation changes, we compare results across the models for the available time periods, generating a range of future trends.

  1. Study of satellite retrieved aerosol optical depth spatial resolution effect on particulate matter concentration prediction

    NASA Astrophysics Data System (ADS)

    Strandgren, J.; Mei, L.; Vountas, M.; Burrows, J. P.; Lyapustin, A.; Wang, Y.

    2014-10-01

    The Aerosol Optical Depth (AOD) spatial resolution effect is investigated for the linear correlation between satellite retrieved AOD and ground level particulate matter concentrations (PM2.5). The Multi-Angle Implementation of Atmospheric Correction (MAIAC) algorithm was developed for the Moderate Resolution Imaging Spectroradiometer (MODIS) for obtaining AOD with a high spatial resolution of 1 km and provides a good dataset for the study of the AOD spatial resolution effect on the particulate matter concentration prediction. 946 Environmental Protection Agency (EPA) ground monitoring stations across the contiguous US have been used to investigate the linear correlation between AOD and PM2.5 using AOD at different spatial resolutions (1, 3 and 10 km) and for different spatial scales (urban scale, meso-scale and continental scale). The main conclusions are: (1) for both urban, meso- and continental scale the correlation between PM2.5 and AOD increased significantly with increasing spatial resolution of the AOD, (2) the correlation between AOD and PM2.5 decreased significantly as the scale of study region increased for the eastern part of the US while vice versa for the western part of the US, (3) the correlation between PM2.5 and AOD is much more stable and better over the eastern part of the US compared to western part due to the surface characteristics and atmospheric conditions like the fine mode fraction.

  2. Restricted cross-scale habitat selection by American beavers.

    PubMed

    Francis, Robert A; Taylor, Jimmy D; Dibble, Eric; Strickland, Bronson; Petro, Vanessa M; Easterwood, Christine; Wang, Guiming

    2017-12-01

    Animal habitat selection, among other ecological phenomena, is spatially scale dependent. Habitat selection by American beavers Castor canadensis (hereafter, beaver) has been studied at singular spatial scales, but to date no research addresses multi-scale selection. Our objectives were to determine if beaver habitat selection was specialized to semiaquatic habitats and if variables explaining habitat selection are consistent between landscape and fine spatial scales. We built maximum entropy (MaxEnt) models to relate landscape-scale presence-only data to landscape variables, and used generalized linear mixed models to evaluate fine spatial scale habitat selection using global positioning system (GPS) relocation data. Explanatory variables between the landscape and fine spatial scale were compared for consistency. Our findings suggested that beaver habitat selection at coarse (study area) and fine (within home range) scales was congruent, and was influenced by increasing amounts of woody wetland edge density and shrub edge density, and decreasing amounts of open water edge density. Habitat suitability at the landscape scale also increased with decreasing amounts of grass frequency. As territorial, central-place foragers, beavers likely trade-off open water edge density (i.e., smaller non-forested wetlands or lodges closer to banks) for defense and shorter distances to forage and obtain construction material. Woody plants along edges and expanses of open water for predator avoidance may limit beaver fitness and subsequently determine beaver habitat selection.

  3. Restricted cross-scale habitat selection by American beavers

    PubMed Central

    Taylor, Jimmy D; Dibble, Eric; Strickland, Bronson; Petro, Vanessa M; Easterwood, Christine; Wang, Guiming

    2017-01-01

    Abstract Animal habitat selection, among other ecological phenomena, is spatially scale dependent. Habitat selection by American beavers Castor canadensis (hereafter, beaver) has been studied at singular spatial scales, but to date no research addresses multi-scale selection. Our objectives were to determine if beaver habitat selection was specialized to semiaquatic habitats and if variables explaining habitat selection are consistent between landscape and fine spatial scales. We built maximum entropy (MaxEnt) models to relate landscape-scale presence-only data to landscape variables, and used generalized linear mixed models to evaluate fine spatial scale habitat selection using global positioning system (GPS) relocation data. Explanatory variables between the landscape and fine spatial scale were compared for consistency. Our findings suggested that beaver habitat selection at coarse (study area) and fine (within home range) scales was congruent, and was influenced by increasing amounts of woody wetland edge density and shrub edge density, and decreasing amounts of open water edge density. Habitat suitability at the landscape scale also increased with decreasing amounts of grass frequency. As territorial, central-place foragers, beavers likely trade-off open water edge density (i.e., smaller non-forested wetlands or lodges closer to banks) for defense and shorter distances to forage and obtain construction material. Woody plants along edges and expanses of open water for predator avoidance may limit beaver fitness and subsequently determine beaver habitat selection. PMID:29492032

  4. A Spectral Method for Spatial Downscaling

    PubMed Central

    Reich, Brian J.; Chang, Howard H.; Foley, Kristen M.

    2014-01-01

    Summary Complex computer models play a crucial role in air quality research. These models are used to evaluate potential regulatory impacts of emission control strategies and to estimate air quality in areas without monitoring data. For both of these purposes, it is important to calibrate model output with monitoring data to adjust for model biases and improve spatial prediction. In this article, we propose a new spectral method to study and exploit complex relationships between model output and monitoring data. Spectral methods allow us to estimate the relationship between model output and monitoring data separately at different spatial scales, and to use model output for prediction only at the appropriate scales. The proposed method is computationally efficient and can be implemented using standard software. We apply the method to compare Community Multiscale Air Quality (CMAQ) model output with ozone measurements in the United States in July 2005. We find that CMAQ captures large-scale spatial trends, but has low correlation with the monitoring data at small spatial scales. PMID:24965037

  5. A comparison of MIKE SHE and DRAINMOD for modeling forested wetland hydrology in coastal South Carolina, USA

    Treesearch

    Zhaohua Dai; Devendra M. Amatya; Ge Sun; Carl C. Trettin; Changsheng Li; Harbin Li

    2010-01-01

    Models are widely used to assess hydrologic impacts of land-management, land-use change and climate change. Two hydrologic models with different spatial scales, MIKE SHE (spatially distributed, watershed-scale) and DRAINMOD (lumped, fieldscale), were compared in terms of their performance in predicting stream flow and water table depth in a first-order forested...

  6. Elevational Gradients in β-Diversity Reflect Variation in the Strength of Local Community Assembly Mechanisms across Spatial Scales

    PubMed Central

    Tello, J. Sebastián; Myers, Jonathan A.; Macía, Manuel J.; Fuentes, Alfredo F.; Cayola, Leslie; Arellano, Gabriel; Loza, M. Isabel; Torrez, Vania; Cornejo, Maritza; Miranda, Tatiana B.; Jørgensen, Peter M.

    2015-01-01

    Despite long-standing interest in elevational-diversity gradients, little is known about the processes that cause changes in the compositional variation of communities (β-diversity) across elevations. Recent studies have suggested that β-diversity gradients are driven by variation in species pools, rather than by variation in the strength of local community assembly mechanisms such as dispersal limitation, environmental filtering, or local biotic interactions. However, tests of this hypothesis have been limited to very small spatial scales that limit inferences about how the relative importance of assembly mechanisms may change across spatial scales. Here, we test the hypothesis that scale-dependent community assembly mechanisms shape biogeographic β-diversity gradients using one of the most well-characterized elevational gradients of tropical plant diversity. Using an extensive dataset on woody plant distributions along a 4,000-m elevational gradient in the Bolivian Andes, we compared observed patterns of β-diversity to null-model expectations. β-deviations (standardized differences from null values) were used to measure the relative effects of local community assembly mechanisms after removing sampling effects caused by variation in species pools. To test for scale-dependency, we compared elevational gradients at two contrasting spatial scales that differed in the size of local assemblages and regions by at least an order of magnitude. Elevational gradients in β-diversity persisted after accounting for regional variation in species pools. Moreover, the elevational gradient in β-deviations changed with spatial scale. At small scales, local assembly mechanisms were detectable, but variation in species pools accounted for most of the elevational gradient in β-diversity. At large spatial scales, in contrast, local assembly mechanisms were a dominant force driving changes in β-diversity. In contrast to the hypothesis that variation in species pools alone drives β-diversity gradients, we show that local community assembly mechanisms contribute strongly to systematic changes in β-diversity across elevations. We conclude that scale-dependent variation in community assembly mechanisms underlies these iconic gradients in global biodiversity. PMID:25803846

  7. Improving left spatial neglect through music scale playing.

    PubMed

    Bernardi, Nicolò Francesco; Cioffi, Maria Cristina; Ronchi, Roberta; Maravita, Angelo; Bricolo, Emanuela; Zigiotto, Luca; Perucca, Laura; Vallar, Giuseppe

    2017-03-01

    The study assessed whether the auditory reference provided by a music scale could improve spatial exploration of a standard musical instrument keyboard in right-brain-damaged patients with left spatial neglect. As performing music scales involves the production of predictable successive pitches, the expectation of the subsequent note may facilitate patients to explore a larger extension of space in the left affected side, during the production of music scales from right to left. Eleven right-brain-damaged stroke patients with left spatial neglect, 12 patients without neglect, and 12 age-matched healthy participants played descending scales on a music keyboard. In a counterbalanced design, the participants' exploratory performance was assessed while producing scales in three feedback conditions: With congruent sound, no-sound, or random sound feedback provided by the keyboard. The number of keys played and the timing of key press were recorded. Spatial exploration by patients with left neglect was superior with congruent sound feedback, compared to both Silence and Random sound conditions. Both the congruent and incongruent sound conditions were associated with a greater deceleration in all groups. The frame provided by the music scale improves exploration of the left side of space, contralateral to the right hemisphere, damaged in patients with left neglect. Performing a scale with congruent sounds may trigger at some extent preserved auditory and spatial multisensory representations of successive sounds, thus influencing the time course of space scanning, and ultimately resulting in a more extensive spatial exploration. These findings offer new perspectives also for the rehabilitation of the disorder. © 2015 The British Psychological Society.

  8. Mammalian phylogenetic diversity-area relationships at a continental scale

    PubMed Central

    Mazel, Florent; Renaud, Julien; Guilhaumon, François; Mouillot, David; Gravel, Dominique; Thuiller, Wilfried

    2015-01-01

    In analogy to the species-area relationship (SAR), one of the few laws in Ecology, the phylogenetic diversity-area relationship (PDAR) describes the tendency of phylogenetic diversity (PD) to increase with area. Although investigating PDAR has the potential to unravel the underlying processes shaping assemblages across spatial scales and to predict PD loss through habitat reduction, it has been little investigated so far. Focusing on PD has noticeable advantages compared to species richness (SR) since PD also gives insights on processes such as speciation/extinction, assembly rules and ecosystem functioning. Here we investigate the universality and pervasiveness of the PDAR at continental scale using terrestrial mammals as study case. We define the relative robustness of PD (compared to SR) to habitat loss as the area between the standardized PDAR and standardized SAR (i.e. standardized by the diversity of the largest spatial window) divided by the area under the standardized SAR only. This metric quantifies the relative increase of PD robustness compared to SR robustness. We show that PD robustness is higher than SR robustness but that it varies among continents. We further use a null model approach to disentangle the relative effect of phylogenetic tree shape and non random spatial distribution of evolutionary history on the PDAR. We find that for most spatial scales and for all continents except Eurasia, PDARs are not different from expected by a model using only the observed SAR and the shape of the phylogenetic tree at continental scale. Interestingly, we detect a strong phylogenetic structure of the Eurasian PDAR that can be predicted by a model that specifically account for a finer biogeographical delineation of this continent. In conclusion, the relative robustness of PD to habitat loss compared to species richness is determined by the phylogenetic tree shape but also depends on the spatial structure of PD. PMID:26649401

  9. Effect of spatial and temporal scales on habitat suitability modeling: A case study of Ommastrephes bartramii in the northwest pacific ocean

    NASA Astrophysics Data System (ADS)

    Gong, Caixia; Chen, Xinjun; Gao, Feng; Tian, Siquan

    2014-12-01

    Temporal and spatial scales play important roles in fishery ecology, and an inappropriate spatio-temporal scale may result in large errors in modeling fish distribution. The objective of this study is to evaluate the roles of spatio-temporal scales in habitat suitability modeling, with the western stock of winter-spring cohort of neon flying squid ( Ommastrephes bartramii) in the northwest Pacific Ocean as an example. In this study, the fishery-dependent data from the Chinese Mainland Squid Jigging Technical Group and sea surface temperature (SST) from remote sensing during August to October of 2003-2008 were used. We evaluated the differences in a habitat suitability index model resulting from aggregating data with 36 different spatial scales with a combination of three latitude scales (0.5°, 1° and 2°), four longitude scales (0.5°, 1°, 2° and 4°), and three temporal scales (week, fortnight, and month). The coefficients of variation (CV) of the weekly, biweekly and monthly suitability index (SI) were compared to determine which temporal and spatial scales of SI model are more precise. This study shows that the optimal temporal and spatial scales with the lowest CV are month, and 0.5° latitude and 0.5° longitude for O. bartramii in the northwest Pacific Ocean. This suitability index model developed with an optimal scale can be cost-effective in improving forecasting fishing ground and requires no excessive sampling efforts. We suggest that the uncertainty associated with spatial and temporal scales used in data aggregations needs to be considered in habitat suitability modeling.

  10. Similar Processes but Different Environmental Filters for Soil Bacterial and Fungal Community Composition Turnover on a Broad Spatial Scale

    PubMed Central

    Chemidlin Prévost-Bouré, Nicolas; Dequiedt, Samuel; Thioulouse, Jean; Lelièvre, Mélanie; Saby, Nicolas P. A.; Jolivet, Claudy; Arrouays, Dominique; Plassart, Pierre; Lemanceau, Philippe; Ranjard, Lionel

    2014-01-01

    Spatial scaling of microorganisms has been demonstrated over the last decade. However, the processes and environmental filters shaping soil microbial community structure on a broad spatial scale still need to be refined and ranked. Here, we compared bacterial and fungal community composition turnovers through a biogeographical approach on the same soil sampling design at a broad spatial scale (area range: 13300 to 31000 km2): i) to examine their spatial structuring; ii) to investigate the relative importance of environmental selection and spatial autocorrelation in determining their community composition turnover; and iii) to identify and rank the relevant environmental filters and scales involved in their spatial variations. Molecular fingerprinting of soil bacterial and fungal communities was performed on 413 soils from four French regions of contrasting environmental heterogeneity (Landes

  11. Similar processes but different environmental filters for soil bacterial and fungal community composition turnover on a broad spatial scale.

    PubMed

    Chemidlin Prévost-Bouré, Nicolas; Dequiedt, Samuel; Thioulouse, Jean; Lelièvre, Mélanie; Saby, Nicolas P A; Jolivet, Claudy; Arrouays, Dominique; Plassart, Pierre; Lemanceau, Philippe; Ranjard, Lionel

    2014-01-01

    Spatial scaling of microorganisms has been demonstrated over the last decade. However, the processes and environmental filters shaping soil microbial community structure on a broad spatial scale still need to be refined and ranked. Here, we compared bacterial and fungal community composition turnovers through a biogeographical approach on the same soil sampling design at a broad spatial scale (area range: 13300 to 31000 km2): i) to examine their spatial structuring; ii) to investigate the relative importance of environmental selection and spatial autocorrelation in determining their community composition turnover; and iii) to identify and rank the relevant environmental filters and scales involved in their spatial variations. Molecular fingerprinting of soil bacterial and fungal communities was performed on 413 soils from four French regions of contrasting environmental heterogeneity (Landes

  12. A new multiscale approach for monitoring vegetation using remote sensing-based indicators in laboratory, field, and landscape.

    PubMed

    Lausch, Angela; Pause, Marion; Merbach, Ines; Zacharias, Steffen; Doktor, Daniel; Volk, Martin; Seppelt, Ralf

    2013-02-01

    Remote sensing is an important tool for studying patterns in surface processes on different spatiotemporal scales. However, differences in the spatiospectral and temporal resolution of remote sensing data as well as sensor-specific surveying characteristics very often hinder comparative analyses and effective up- and downscaling analyses. This paper presents a new methodical framework for combining hyperspectral remote sensing data on different spatial and temporal scales. We demonstrate the potential of using the "One Sensor at Different Scales" (OSADIS) approach for the laboratory (plot), field (local), and landscape (regional) scales. By implementing the OSADIS approach, we are able (1) to develop suitable stress-controlled vegetation indices for selected variables such as the Leaf Area Index (LAI), chlorophyll, photosynthesis, water content, nutrient content, etc. over a whole vegetation period. Focused laboratory monitoring can help to document additive and counteractive factors and processes of the vegetation and to correctly interpret their spectral response; (2) to transfer the models obtained to the landscape level; (3) to record imaging hyperspectral information on different spatial scales, achieving a true comparison of the structure and process results; (4) to minimize existing errors from geometrical, spectral, and temporal effects due to sensor- and time-specific differences; and (5) to carry out a realistic top- and downscaling by determining scale-dependent correction factors and transfer functions. The first results of OSADIS experiments are provided by controlled whole vegetation experiments on barley under water stress on the plot scale to model LAI using the vegetation indices Normalized Difference Vegetation Index (NDVI) and green NDVI (GNDVI). The regression model ascertained from imaging hyperspectral AISA-EAGLE/HAWK (DUAL) data was used to model LAI. This was done by using the vegetation index GNDVI with an R (2) of 0.83, which was transferred to airborne hyperspectral data on the local and regional scales. For this purpose, hyperspectral imagery was collected at three altitudes over a land cover gradient of 25 km within a timeframe of a few minutes, yielding a spatial resolution from 1 to 3 m. For all recorded spatial scales, both the LAI and the NDVI were determined. The spatial properties of LAI and NDVI of all recorded hyperspectral images were compared using semivariance metrics derived from the variogram. The first results show spatial differences in the heterogeneity of LAI and NDVI from 1 to 3 m with the recorded hyperspectral data. That means that differently recorded data on different scales might not sufficiently maintain the spatial properties of high spatial resolution hyperspectral images.

  13. Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

    Treesearch

    Natalie A. Griffiths; Paul J. Hanson; Daniel M. Ricciuto; Colleen M. Iversen; Anna M. Jensen; Avni Malhotra; Karis J. McFarlane; Richard J. Norby; Khachik Sargsyan; Stephen D. Sebestyen; Xiaoying Shi; Anthony P. Walker; Eric J. Ward; Jeffrey M. Warren; David J. Weston

    2017-01-01

    We are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial...

  14. Spatial pattern of Baccharis platypoda shrub as determined by sex and life stages

    NASA Astrophysics Data System (ADS)

    Fonseca, Darliana da Costa; de Oliveira, Marcio Leles Romarco; Pereira, Israel Marinho; Gonzaga, Anne Priscila Dias; de Moura, Cristiane Coelho; Machado, Evandro Luiz Mendonça

    2017-11-01

    Spatial patterns of dioecious species can be determined by their nutritional requirements and intraspecific competition, apart from being a response to environmental heterogeneity. The aim of the study was to evaluate the spatial pattern of populations of a dioecious shrub reporting to sex and reproductive stage patterns of individuals. Sampling was carried out in three areas located in the meridional portion of Serra do Espinhaço, where in individuals of the studied species were mapped. The spatial pattern was determined through O-ring analysis and Ripley's K-function and the distribution of individuals' frequencies was verified through x2 test. Populations in two areas showed an aggregate spatial pattern tending towards random or uniform according to the observed scale. Male and female adults presented an aggregate pattern at smaller scales, while random and uniform patterns were verified above 20 m for individuals of both sexes of the areas A2 and A3. Young individuals presented an aggregate pattern in all areas and spatial independence in relation to adult individuals, especially female plants. The interactions between individuals of both genders presented spatial independence with respect to spatial distribution. Baccharis platypoda showed characteristics in accordance with the spatial distribution of savannic and dioecious species, whereas the population was aggregated tending towards random at greater spatial scales. Young individuals showed an aggregated pattern at different scales compared to adults, without positive association between them. Female and male adult individuals presented similar characteristics, confirming that adult individuals at greater scales are randomly distributed despite their distinct preferences for environments with moisture variation.

  15. Network analysis reveals multiscale controls on streamwater chemistry

    USGS Publications Warehouse

    McGuire, Kevin J.; Torgersen, Christian E.; Likens, Gene E.; Buso, Donald C.; Lowe, Winsor H.; Bailey, Scott W.

    2014-01-01

    By coupling synoptic data from a basin-wide assessment of streamwater chemistry with network-based geostatistical analysis, we show that spatial processes differentially affect biogeochemical condition and pattern across a headwater stream network. We analyzed a high-resolution dataset consisting of 664 water samples collected every 100 m throughout 32 tributaries in an entire fifth-order stream network. These samples were analyzed for an exhaustive suite of chemical constituents. The fine grain and broad extent of this study design allowed us to quantify spatial patterns over a range of scales by using empirical semivariograms that explicitly incorporated network topology. Here, we show that spatial structure, as determined by the characteristic shape of the semivariograms, differed both among chemical constituents and by spatial relationship (flow-connected, flow-unconnected, or Euclidean). Spatial structure was apparent at either a single scale or at multiple nested scales, suggesting separate processes operating simultaneously within the stream network and surrounding terrestrial landscape. Expected patterns of spatial dependence for flow-connected relationships (e.g., increasing homogeneity with downstream distance) occurred for some chemical constituents (e.g., dissolved organic carbon, sulfate, and aluminum) but not for others (e.g., nitrate, sodium). By comparing semivariograms for the different chemical constituents and spatial relationships, we were able to separate effects on streamwater chemistry of (i) fine-scale versus broad-scale processes and (ii) in-stream processes versus landscape controls. These findings provide insight on the hierarchical scaling of local, longitudinal, and landscape processes that drive biogeochemical patterns in stream networks.

  16. Network analysis reveals multiscale controls on streamwater chemistry

    PubMed Central

    McGuire, Kevin J.; Torgersen, Christian E.; Likens, Gene E.; Buso, Donald C.; Lowe, Winsor H.; Bailey, Scott W.

    2014-01-01

    By coupling synoptic data from a basin-wide assessment of streamwater chemistry with network-based geostatistical analysis, we show that spatial processes differentially affect biogeochemical condition and pattern across a headwater stream network. We analyzed a high-resolution dataset consisting of 664 water samples collected every 100 m throughout 32 tributaries in an entire fifth-order stream network. These samples were analyzed for an exhaustive suite of chemical constituents. The fine grain and broad extent of this study design allowed us to quantify spatial patterns over a range of scales by using empirical semivariograms that explicitly incorporated network topology. Here, we show that spatial structure, as determined by the characteristic shape of the semivariograms, differed both among chemical constituents and by spatial relationship (flow-connected, flow-unconnected, or Euclidean). Spatial structure was apparent at either a single scale or at multiple nested scales, suggesting separate processes operating simultaneously within the stream network and surrounding terrestrial landscape. Expected patterns of spatial dependence for flow-connected relationships (e.g., increasing homogeneity with downstream distance) occurred for some chemical constituents (e.g., dissolved organic carbon, sulfate, and aluminum) but not for others (e.g., nitrate, sodium). By comparing semivariograms for the different chemical constituents and spatial relationships, we were able to separate effects on streamwater chemistry of (i) fine-scale versus broad-scale processes and (ii) in-stream processes versus landscape controls. These findings provide insight on the hierarchical scaling of local, longitudinal, and landscape processes that drive biogeochemical patterns in stream networks. PMID:24753575

  17. Network analysis reveals multiscale controls on streamwater chemistry.

    PubMed

    McGuire, Kevin J; Torgersen, Christian E; Likens, Gene E; Buso, Donald C; Lowe, Winsor H; Bailey, Scott W

    2014-05-13

    By coupling synoptic data from a basin-wide assessment of streamwater chemistry with network-based geostatistical analysis, we show that spatial processes differentially affect biogeochemical condition and pattern across a headwater stream network. We analyzed a high-resolution dataset consisting of 664 water samples collected every 100 m throughout 32 tributaries in an entire fifth-order stream network. These samples were analyzed for an exhaustive suite of chemical constituents. The fine grain and broad extent of this study design allowed us to quantify spatial patterns over a range of scales by using empirical semivariograms that explicitly incorporated network topology. Here, we show that spatial structure, as determined by the characteristic shape of the semivariograms, differed both among chemical constituents and by spatial relationship (flow-connected, flow-unconnected, or Euclidean). Spatial structure was apparent at either a single scale or at multiple nested scales, suggesting separate processes operating simultaneously within the stream network and surrounding terrestrial landscape. Expected patterns of spatial dependence for flow-connected relationships (e.g., increasing homogeneity with downstream distance) occurred for some chemical constituents (e.g., dissolved organic carbon, sulfate, and aluminum) but not for others (e.g., nitrate, sodium). By comparing semivariograms for the different chemical constituents and spatial relationships, we were able to separate effects on streamwater chemistry of (i) fine-scale versus broad-scale processes and (ii) in-stream processes versus landscape controls. These findings provide insight on the hierarchical scaling of local, longitudinal, and landscape processes that drive biogeochemical patterns in stream networks.

  18. Spatial variations of the Sr I 4607 Å scattering polarization peak

    NASA Astrophysics Data System (ADS)

    Bianda, M.; Berdyugina, S.; Gisler, D.; Ramelli, R.; Belluzzi, L.; Carlin, E. S.; Stenflo, J. O.; Berkefeld, T.

    2018-06-01

    Context. The scattering polarization signal observed in the photospheric Sr I 4607 Å line is expected to vary at granular spatial scales. This variation can be due to changes in the magnetic field intensity and orientation (Hanle effect), but also to spatial and temporal variations in the plasma properties. Measuring the spatial variation of such polarization signal would allow us to study the properties of the magnetic fields at subgranular scales, but observations are challenging since both high spatial resolution and high spectropolarimetric sensitivity are required. Aims: We aim to provide observational evidence of the polarization peak spatial variations, and to analyze the correlation they might have with granulation. Methods: Observations conjugating high spatial resolution and high spectropolarimetric precision were performed with the Zurich IMaging POLarimeter, ZIMPOL, at the GREGOR solar telescope, taking advantage of the adaptive optics system and the newly installed image derotator. Results: Spatial variations of the scattering polarization in the Sr I 4607 Å line are clearly observed. The spatial scale of these variations is comparable with the granular size. Small correlations between the polarization signal amplitude and the continuum intensity indicate that the polarization is higher at the center of granules than in the intergranular lanes.

  19. SU-F-I-10: Spatially Local Statistics for Adaptive Image Filtering

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Iliopoulos, AS; Sun, X; Floros, D

    Purpose: To facilitate adaptive image filtering operations, addressing spatial variations in both noise and signal. Such issues are prevalent in cone-beam projections, where physical effects such as X-ray scattering result in spatially variant noise, violating common assumptions of homogeneous noise and challenging conventional filtering approaches to signal extraction and noise suppression. Methods: We present a computational mechanism for probing into and quantifying the spatial variance of noise throughout an image. The mechanism builds a pyramid of local statistics at multiple spatial scales; local statistical information at each scale includes (weighted) mean, median, standard deviation, median absolute deviation, as well asmore » histogram or dynamic range after local mean/median shifting. Based on inter-scale differences of local statistics, the spatial scope of distinguishable noise variation is detected in a semi- or un-supervised manner. Additionally, we propose and demonstrate the incorporation of such information in globally parametrized (i.e., non-adaptive) filters, effectively transforming the latter into spatially adaptive filters. The multi-scale mechanism is materialized by efficient algorithms and implemented in parallel CPU/GPU architectures. Results: We demonstrate the impact of local statistics for adaptive image processing and analysis using cone-beam projections of a Catphan phantom, fitted within an annulus to increase X-ray scattering. The effective spatial scope of local statistics calculations is shown to vary throughout the image domain, necessitating multi-scale noise and signal structure analysis. Filtering results with and without spatial filter adaptation are compared visually, illustrating improvements in imaging signal extraction and noise suppression, and in preserving information in low-contrast regions. Conclusion: Local image statistics can be incorporated in filtering operations to equip them with spatial adaptivity to spatial signal/noise variations. An efficient multi-scale computational mechanism is developed to curtail processing latency. Spatially adaptive filtering may impact subsequent processing tasks such as reconstruction and numerical gradient computations for deformable registration. NIH Grant No. R01-184173.« less

  20. A spatial scaling relationship for soil moisture in a semiarid landscape, using spatial scaling relationships for pedology

    NASA Astrophysics Data System (ADS)

    Willgoose, G. R.; Chen, M.; Cohen, S.; Saco, P. M.; Hancock, G. R.

    2013-12-01

    In humid areas it is generally considered that soil moisture scales spatially according to the wetness index of the landscape. This scaling arises from lateral flow downslope of ground water within the soil zone. However, in semi-arid and drier regions, this lateral flow is small and fluxes are dominated by vertical flows driven by infiltration and evapotranspiration. Thus, in the absence of runon processes, soil moisture at a location is more driven by local factors such as soil and vegetation properties at that location rather than upstream processes draining to that point. The 'apparent' spatial randomness of soil and vegetation properties generally suggests that soil moisture for semi-arid regions is spatially random. In this presentation a new analysis of neutron probe data during summer from the Tarrawarra site near Melbourne, Australia shows persistent spatial organisation of soil moisture over several years. This suggests a link between permanent features of the catchment (e.g. soil properties) and soil moisture distribution, even though the spatial pattern of soil moisture during the 4 summers monitored appears spatially random. This and other data establishes a prima facie case that soil variations drive spatial variation in soil moisture. Accordingly, we used a previously published spatial scaling relationship for soil properties derived using the mARM pedogenesis model to simulate the spatial variation of soil grading. This soil grading distribution was used in the Rosetta pedotransfer model to derive a spatial distribution of soil functional properties (e.g. saturated hydraulic conductivity, porosity). These functional properties were then input into the HYDRUS-1D soil moisture model and soil moisture simulated for 3 years at daily resolution. The HYDRUS model used had previously been calibrated to field observed soil moisture data at our SASMAS field site. The scaling behaviour of soil moisture derived from this modelling will be discussed and compared with observed data from our SASMAS field sites.

  1. Molecular dynamics modeling of periodic nanostructuring of metals with a short UV laser pulse under spatial confinement by a water layer

    NASA Astrophysics Data System (ADS)

    Ivanov, D. S.; Blumenstein, A.; Ihlemann, J.; Simon, P.; Garcia, M. E.; Rethfeld, B.

    2017-12-01

    The possibility of material surfaces restructuring on the nanoscale due to ultrashort laser pulses has recently found a number of practical applications. It was found experimentally that under spatial confinement due to a liquid layer atop the surface, one can achieve even finer and cleaner structures as compared to that in air or in vacuum. The mechanism of the materials restructuring under the liquid confinement, however, is not clear and its experimental study is limited by the extreme conditions realized during the intense and localized laser energy deposition that takes place on nanometer spatial and picosecond time-scales. In this theoretical work, we suggest a molecular dynamics-based approach that is capable of simulating the processes of periodic nanostructuring with ultrashort UV laser pulse on metals. The theoretical results of the simulations are directly compared with the experimental data on the same spatial and temporal scales.

  2. Are bark beetle outbreaks less synchronous than forest Lepidoptera outbreaks?

    Treesearch

    Bjorn Okland; Andrew M. Liebhold; Ottar N. Bjornstad; Nadir Erbilgin; Paal Krokene; Paal Krokene

    2005-01-01

    Comparisons of intraspecific spatial synchrony across multiple epidemic insect species can be useful for generating hypotheses about major determinants of population patterns at larger scales. The present study compares patterns of spatial synchrony in outbreaks of six epidemic bark beetle species in North America and Europe. Spatial synchrony among populations of the...

  3. Deprivation Indices, Population Health and Geography: An Evaluation of the Spatial Effectiveness of Indices at Multiple Scales

    PubMed Central

    Bell, Nathaniel; Dunn, James R.; Oliver, Lisa

    2007-01-01

    Area-based deprivation indices (ABDIs) have become a common tool with which to investigate the patterns and magnitude of socioeconomic inequalities in health. ABDIs are also used as a proxy for individual socioeconomic status. Despite their widespread use, comparably less attention has been focused on their geographic variability and practical concerns surrounding the Modifiable Area Unit Problem (MAUP) than on the individual attributes that make up the indices. Although scale is increasingly recognized as an important factor in interpreting mapped results among population health researchers, less attention has been paid specifically to ABDI and scale. In this paper, we highlight the effect of scale on indices by mapping ABDIs at multiple census scales in an urban area. In addition, we compare self-rated health data from the Canadian Community Health Survey with ABDIs at two census scales. The results of our analysis confirm the influence of spatial extent and scale on mapping population health—with potential implications for health policy implementation and resource distribution. PMID:17447145

  4. L-band Soil Moisture Mapping using Small UnManned Aerial Systems

    NASA Astrophysics Data System (ADS)

    Dai, E.

    2015-12-01

    Soil moisture is of fundamental importance to many hydrological, biological and biogeochemical processes, plays an important role in the development and evolution of convective weather and precipitation, and impacts water resource management, agriculture, and flood runoff prediction. The launch of NASA's Soil Moisture Active/Passive (SMAP) mission in 2015 promises to provide global measurements of soil moisture and surface freeze/thaw state at fixed crossing times and spatial resolutions as low as 5 km for some products. However, there exists a need for measurements of soil moisture on smaller spatial scales and arbitrary diurnal times for SMAP validation, precision agriculture and evaporation and transpiration studies of boundary layer heat transport. The Lobe Differencing Correlation Radiometer (LDCR) provides a means of mapping soil moisture on spatial scales as small as several meters (i.e., the height of the platform) .Compared with various other proposed methods of validation based on either situ measurements [1,2] or existing airborne sensors suitable for manned aircraft deployment [3], the integrated design of the LDCR on a lightweight small UAS (sUAS) is capable of providing sub-watershed (~km scale) coverage at very high spatial resolution (~15 m) suitable for scaling scale studies, and at comparatively low operator cost. The LDCR on Tempest unit can supply the soil moisture mapping with different resolution which is of order the Tempest altitude.

  5. SPATIALLY RESOLVED SPECTROSCOPY OF EUROPA’S LARGE-SCALE COMPOSITIONAL UNITS AT 3–4 μ m WITH KECK NIRSPEC

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fischer, P. D.; Brown, M. E.; Trumbo, S. K.

    2017-01-01

    We present spatially resolved spectroscopic observations of Europa’s surface at 3–4 μ m obtained with the near-infrared spectrograph and adaptive optics system on the Keck II telescope. These are the highest quality spatially resolved reflectance spectra of Europa’s surface at 3–4 μ m. The observations spatially resolve Europa’s large-scale compositional units at a resolution of several hundred kilometers. The spectra show distinct features and geographic variations associated with known compositional units; in particular, large-scale leading hemisphere chaos shows a characteristic longward shift in peak reflectance near 3.7 μ m compared to icy regions. These observations complement previous spectra of large-scalemore » chaos, and can aid efforts to identify the endogenous non-ice species.« less

  6. The spatial sensitivity of the spectral diversity-biodiversity relationship: an experimental test in a prairie grassland.

    PubMed

    Wang, Ran; Gamon, John A; Cavender-Bares, Jeannine; Townsend, Philip A; Zygielbaum, Arthur I

    2018-03-01

    Remote sensing has been used to detect plant biodiversity in a range of ecosystems based on the varying spectral properties of different species or functional groups. However, the most appropriate spatial resolution necessary to detect diversity remains unclear. At coarse resolution, differences among spectral patterns may be too weak to detect. In contrast, at fine resolution, redundant information may be introduced. To explore the effect of spatial resolution, we studied the scale dependence of spectral diversity in a prairie ecosystem experiment at Cedar Creek Ecosystem Science Reserve, Minnesota, USA. Our study involved a scaling exercise comparing synthetic pixels resampled from high-resolution images within manipulated diversity treatments. Hyperspectral data were collected using several instruments on both ground and airborne platforms. We used the coefficient of variation (CV) of spectral reflectance in space as the indicator of spectral diversity and then compared CV at different scales ranging from 1 mm 2 to 1 m 2 to conventional biodiversity metrics, including species richness, Shannon's index, Simpson's index, phylogenetic species variation, and phylogenetic species evenness. In this study, higher species richness plots generally had higher CV. CV showed higher correlations with Shannon's index and Simpson's index than did species richness alone, indicating evenness contributed to the spectral diversity. Correlations with species richness and Simpson's index were generally higher than with phylogenetic species variation and evenness measured at comparable spatial scales, indicating weaker relationships between spectral diversity and phylogenetic diversity metrics than with species diversity metrics. High resolution imaging spectrometer data (1 mm 2 pixels) showed the highest sensitivity to diversity level. With decreasing spatial resolution, the difference in CV between diversity levels decreased and greatly reduced the optical detectability of biodiversity. The optimal pixel size for distinguishing α diversity in these prairie plots appeared to be around 1 mm to 10 cm, a spatial scale similar to the size of an individual herbaceous plant. These results indicate a strong scale-dependence of the spectral diversity-biodiversity relationships, with spectral diversity best able to detect a combination of species richness and evenness, and more weakly detecting phylogenetic diversity. These findings can be used to guide airborne studies of biodiversity and develop more effective large-scale biodiversity sampling methods. ©2018 The Authors Ecological Applications published by Wiley Periodicals, Inc. on behalf of Ecological Society of America.

  7. Consistency of Aquarius version-4 sea surface salinity with Argo products on various spatial and temporal scales

    NASA Astrophysics Data System (ADS)

    Lee, Tong

    2017-04-01

    Understanding the accuracies of satellite-derived sea surface salinity (SSS) measurements in depicting temporal changes and the dependence of the accuracies on spatiotemporal scales are important to capability assessment, future mission design, and applications to study oceanic phenomena of different spatiotemporal scales. This study quantifies the consistency between Aquarius Version-4 monthly gridded SSS (released in late 2015) with two widely used Argo monthly gridded near-surface salinity products. The analysis focused on their consistency in depicting temporal changes (including seasonal and non-seasonal) on various spatial scales: 1˚ x1˚ , 3˚ x3˚ , and 10˚ x10˚ . Globally averaged standard deviation (STD) values for Aquarius-Argo salinity differences on these three spatial scales are 0.16, 0.14, 0.09 psu, compared to those between the two Argo products of 0.10, 0.09, and 0.04 psu. Aquarius SSS compare better with Argo data on non-seasonal (e.g., interannual and intraseasonal) than for seasonal time scales. The seasonal Aquarius-Argo SSS differences are mostly concentrated at high latitudes. The Aquarius team is making active efforts to further reduce these high-latitude seasonal biases. The consistency between Aquarius and Argo salinity is similar to that between the two Argo products in the tropics and subtropics for non-seasonal signals, and in the tropics for seasonal signals. Therefore, the representativeness errors of the Argo products for various spatial scales (related to sampling and gridding) need to be taken into account when estimating the uncertainty of Aquarius SSS. The globally averaged uncertainty of large-scale (10˚ x10˚ ) non-seasonal Aquarius SSS is approximately 0.04 psu. These estimates reflect the significant improvements of Aquarius Version-4 SSS over the previous versions. The estimates can be used as baseline requirements for future ocean salinity missions from space. The spatial distribution of the uncertainty estimates is also useful for assimilation of Aquarius SSS.

  8. Measurement of spatial and temporal variation in volatile hazardous air pollutants in Tacoma, Washington, using a mobile membrane introduction mass spectrometry (MIMS) system.

    PubMed

    Davey, Nicholas G; Fitzpatrick, Cole T E; Etzkorn, Jacob M; Martinsen, Morten; Crampton, Robert S; Onstad, Gretchen D; Larson, Timothy V; Yost, Michael G; Krogh, Erik T; Gilroy, Michael; Himes, Kathy H; Saganić, Erik T; Simpson, Christopher D; Gill, Christopher G

    2014-09-19

    The objective of this study was to use membrane introduction mass spectrometry (MIMS), implemented on a mobile platform, in order to provide real-time, fine-scale, temporally and spatially resolved measurements of several hazardous air pollutants. This work is important because there is now substantial evidence that fine-scale spatial and temporal variations of air pollutant concentrations are important determinants of exposure to air pollution and adverse health outcomes. The study took place in Tacoma, WA during periods of impaired air quality in the winter and summer of 2008 and 2009. Levels of fine particles were higher in winter compared to summer, and were spatially uniform across the study area. Concentrations of vapor phase pollutants measured by membrane introduction mass spectrometry (MIMS), notably benzene and toluene, had relatively uniform spatial distributions at night, but exhibited substantial spatial variation during the day-daytime levels were up to 3-fold higher at traffic-impacted locations compared to a reference site. Although no direct side-by-side comparison was made between the MIMS system and traditional fixed site monitors, the MIMS system typically reported higher concentrations of specific VOCs, particularly benzene, ethylbenzene and naphthalene, compared to annual average concentrations obtained from SUMA canisters and gas chromatographic analysis at the fixed sites.

  9. Spatial multi-scale variability of soil nutrients in relation to environmental factors in a typical agricultural region, eastern China.

    PubMed

    Liu, Yang; Lv, Jianshu; Zhang, Bing; Bi, Jun

    2013-04-15

    Identifying the sources of spatial variability and deficiency risk of soil nutrients is a crucial issue for soil and agriculture management. A total of 1247 topsoil samples (0-20 cm) were collected at the nodes of a 2×2 km grid in Rizhao City and the contents of soil organic carbon (OC), total nitrogen (TN), and total phosphorus (TP) were determined. Factorial kriging analysis (FKA), stepwise multiple regression, and indicator kriging (IK) were appled to investigate the scale dependent correlations among soil nutrients, identify the sources of spatial variability at each spatial scale, and delineate the potential risk of soil nutrient deficiency. Linear model of co-regionalization (LMC) fitting indicated that the presence of multi-scale variation was comprised of nugget effect, an exponential structure with a range of 12 km (local scale), and a spherical structure with a range of 84 km (regional scale). The short-range variation of OC and TN was mainly dominated by land use types, and TP was controlled by terrain. At long-range scale, spatial variation of OC, TN, and TP was dominated by parent material. Indicator kriging maps depicted the probability of soil nutrient deficiency compared with the background values in eastern Shandong province. The high deficiency risk area of all nutrient integration was mainly located in eastern and northwestern parts. Copyright © 2013 Elsevier B.V. All rights reserved.

  10. A rank-based approach for correcting systematic biases in spatial disaggregation of coarse-scale climate simulations

    NASA Astrophysics Data System (ADS)

    Nahar, Jannatun; Johnson, Fiona; Sharma, Ashish

    2017-07-01

    Use of General Circulation Model (GCM) precipitation and evapotranspiration sequences for hydrologic modelling can result in unrealistic simulations due to the coarse scales at which GCMs operate and the systematic biases they contain. The Bias Correction Spatial Disaggregation (BCSD) method is a popular statistical downscaling and bias correction method developed to address this issue. The advantage of BCSD is its ability to reduce biases in the distribution of precipitation totals at the GCM scale and then introduce more realistic variability at finer scales than simpler spatial interpolation schemes. Although BCSD corrects biases at the GCM scale before disaggregation; at finer spatial scales biases are re-introduced by the assumptions made in the spatial disaggregation process. Our study focuses on this limitation of BCSD and proposes a rank-based approach that aims to reduce the spatial disaggregation bias especially for both low and high precipitation extremes. BCSD requires the specification of a multiplicative bias correction anomaly field that represents the ratio of the fine scale precipitation to the disaggregated precipitation. It is shown that there is significant temporal variation in the anomalies, which is masked when a mean anomaly field is used. This can be improved by modelling the anomalies in rank-space. Results from the application of the rank-BCSD procedure improve the match between the distributions of observed and downscaled precipitation at the fine scale compared to the original BCSD approach. Further improvements in the distribution are identified when a scaling correction to preserve mass in the disaggregation process is implemented. An assessment of the approach using a single GCM over Australia shows clear advantages especially in the simulation of particularly low and high downscaled precipitation amounts.

  11. Homogenization of a Directed Dispersal Model for Animal Movement in a Heterogeneous Environment.

    PubMed

    Yurk, Brian P

    2016-10-01

    The dispersal patterns of animals moving through heterogeneous environments have important ecological and epidemiological consequences. In this work, we apply the method of homogenization to analyze an advection-diffusion (AD) model of directed movement in a one-dimensional environment in which the scale of the heterogeneity is small relative to the spatial scale of interest. We show that the large (slow) scale behavior is described by a constant-coefficient diffusion equation under certain assumptions about the fast-scale advection velocity, and we determine a formula for the slow-scale diffusion coefficient in terms of the fast-scale parameters. We extend the homogenization result to predict invasion speeds for an advection-diffusion-reaction (ADR) model with directed dispersal. For periodic environments, the homogenization approximation of the solution of the AD model compares favorably with numerical simulations. Invasion speed approximations for the ADR model also compare favorably with numerical simulations when the spatial period is sufficiently small.

  12. Spatial Risk Assessments Based on Vector-Borne Disease Epidemiologic Data: Importance of Scale for West Nile Virus Disease in Colorado

    PubMed Central

    Winters, Anna M.; Eisen, Rebecca J.; Delorey, Mark J.; Fischer, Marc; Nasci, Roger S.; Zielinski-Gutierrez, Emily; Moore, Chester G.; Pape, W. John; Eisen, Lars

    2010-01-01

    We used epidemiologic data for human West Nile virus (WNV) disease in Colorado from 2003 and 2007 to determine 1) the degree to which estimates of vector-borne disease occurrence is influenced by spatial scale of data aggregation (county versus census tract), and 2) the extent of concordance between spatial risk patterns based on case counts versus incidence. Statistical analyses showed that county, compared with census tract, accounted for approximately 50% of the overall variance in WNV disease incidence, and approximately 33% for the subset of cases classified as West Nile neuroinvasive disease. These findings indicate that sub-county scale presentation provides valuable risk information for stakeholders. There was high concordance between spatial patterns of WNV disease incidence and case counts for census tract (83%) but not for county (50%) or zip code (31%). We discuss how these findings impact on practices to develop spatial epidemiologic data for vector-borne diseases and present data to stakeholders. PMID:20439980

  13. A spectral method for spatial downscaling | Science Inventory ...

    EPA Pesticide Factsheets

    Complex computer models play a crucial role in air quality research. These models are used to evaluate potential regulatory impacts of emission control strategies and to estimate air quality in areas without monitoring data. For both of these purposes, it is important to calibrate model output with monitoring data to adjust for model biases and improve spatial prediction. In this paper, we propose a new spectral method to study and exploit complex relationships between model output and monitoring data. Spectral methods allow us to estimate the relationship between model output and monitoring data separately at different spatial scales, and to use model output for prediction only at the appropriate scales. The proposed method is computationally efficient and can be implemented using standard software. We apply the method to compare Community Multiscale Air Quality (CMAQ) model output with ozone measurements in the United States in July, 2005. We find that CMAQ captures large-scale spatial trends, but has low correlation with the monitoring data at small spatial scales. The National Exposure Research Laboratory′s (NERL′s)Atmospheric Modeling Division (AMAD) conducts research in support of EPA′s mission to protect human health and the environment. AMAD′s research program is engaged in developing and evaluating predictive atmospheric models on all spatial and temporal scales for forecasting the Nation′s air quality and for assessing ch

  14. Spatially Resolved Mid-IR Spectra from Meteorites; Linking Composition, Crystallographic Orientation and Spectra on the Micro-Scale

    NASA Astrophysics Data System (ADS)

    Stephen, N. R.

    2016-08-01

    IR spectroscopy is used to infer composition of extraterrestrial bodies, comparing bulk spectra to databases of separate mineral phases. We extract spatially resolved meteorite-specific spectra from achondrites with respect to zonation and orientation.

  15. Large-Scale, High-Resolution Neurophysiological Maps Underlying fMRI of Macaque Temporal Lobe

    PubMed Central

    Papanastassiou, Alex M.; DiCarlo, James J.

    2013-01-01

    Maps obtained by functional magnetic resonance imaging (fMRI) are thought to reflect the underlying spatial layout of neural activity. However, previous studies have not been able to directly compare fMRI maps to high-resolution neurophysiological maps, particularly in higher level visual areas. Here, we used a novel stereo microfocal x-ray system to localize thousands of neural recordings across monkey inferior temporal cortex (IT), construct large-scale maps of neuronal object selectivity at subvoxel resolution, and compare those neurophysiology maps with fMRI maps from the same subjects. While neurophysiology maps contained reliable structure at the sub-millimeter scale, fMRI maps of object selectivity contained information at larger scales (>2.5 mm) and were only partly correlated with raw neurophysiology maps collected in the same subjects. However, spatial smoothing of neurophysiology maps more than doubled that correlation, while a variety of alternative transforms led to no significant improvement. Furthermore, raw spiking signals, once spatially smoothed, were as predictive of fMRI maps as local field potential signals. Thus, fMRI of the inferior temporal lobe reflects a spatially low-passed version of neurophysiology signals. These findings strongly validate the widespread use of fMRI for detecting large (>2.5 mm) neuronal domains of object selectivity but show that a complete understanding of even the most pure domains (e.g., faces vs nonface objects) requires investigation at fine scales that can currently only be obtained with invasive neurophysiological methods. PMID:24048850

  16. Spatial Interpretation of Tower, Chamber and Modelled Terrestrial Fluxes in a Tropical Forest Plantation

    NASA Astrophysics Data System (ADS)

    Whidden, E.; Roulet, N.

    2003-04-01

    Interpretation of a site average terrestrial flux may be complicated in the presence of inhomogeneities. Inhomogeneity may invalidate the basic assumptions of aerodynamic flux measurement. Chamber measurement may miss or misinterpret important temporal or spatial anomalies. Models may smooth over important nonlinearities depending on the scale of application. Although inhomogeneity is usually seen as a design problem, many sites have spatial variance that may have a large impact on net flux, and in many cases a large homogeneous surface is unrealistic. The sensitivity and validity of a site average flux are investigated in the presence of an inhomogeneous site. Directional differences are used to evaluate the validity of aerodynamic methods and the computation of a site average tower flux. Empirical and modelling methods are used to interpret the spatial controls on flux. An ecosystem model, Ecosys, is used to assess spatial length scales appropriate to the ecophysiologic controls. A diffusion model is used to compare tower, chamber, and model data, by spatially weighting contributions within the tower footprint. Diffusion model weighting is also used to improve tower flux estimates by producing footprint averaged ecological parameters (soil moisture, soil temperature, etc.). Although uncertainty remains in the validity of measurement methods and the accuracy of diffusion models, a detailed spatial interpretation is required at an inhomogeneous site. Flux estimation between methods improves with spatial interpretation, showing the importance to an estimation of a site average flux. Small-scale temporal and spatial anomalies may be relatively unimportant to overall flux, but accounting for medium-scale differences in ecophysiological controls is necessary. A combination of measurements and modelling can be used to define the appropriate time and length scales of significant non-linearity due to inhomogeneity.

  17. Spatial analysis of instream nitrogen loads and factors controlling nitrogen delivery to streams in the southeastern United States using spatially referenced regression on watershed attributes (SPARROW) and regional classification frameworks

    USGS Publications Warehouse

    Hoos, A.B.; McMahon, G.

    2009-01-01

    Understanding how nitrogen transport across the landscape varies with landscape characteristics is important for developing sound nitrogen management policies. We used a spatially referenced regression analysis (SPARROW) to examine landscape characteristics influencing delivery of nitrogen from sources in a watershed to stream channels. Modelled landscape delivery ratio varies widely (by a factor of 4) among watersheds in the southeastern United States - higher in the western part (Tennessee, Alabama, and Mississippi) than in the eastern part, and the average value for the region is lower compared to other parts of the nation. When we model landscape delivery ratio as a continuous function of local-scale landscape characteristics, we estimate a spatial pattern that varies as a function of soil and climate characteristics but exhibits spatial structure in residuals (observed load minus predicted load). The spatial pattern of modelled landscape delivery ratio and the spatial pattern of residuals coincide spatially with Level III ecoregions and also with hydrologic landscape regions. Subsequent incorporation into the model of these frameworks as regional scale variables improves estimation of landscape delivery ratio, evidenced by reduced spatial bias in residuals, and suggests that cross-scale processes affect nitrogen attenuation on the landscape. The model-fitted coefficient values are logically consistent with the hypothesis that broad-scale classifications of hydrologic response help to explain differential rates of nitrogen attenuation, controlling for local-scale landscape characteristics. Negative model coefficients for hydrologic landscape regions where the primary flow path is shallow ground water suggest that a lower fraction of nitrogen mass will be delivered to streams; this relation is reversed for regions where the primary flow path is overland flow.

  18. Spatial analysis of instream nitrogen loads and factors controlling nitrogen delivery to streams in the southeastern United States using spatially referenced regression on watershed attributes (SPARROW) and regional classification frameworks

    USGS Publications Warehouse

    Hoos, Anne B.; McMahon, Gerard

    2009-01-01

    Understanding how nitrogen transport across the landscape varies with landscape characteristics is important for developing sound nitrogen management policies. We used a spatially referenced regression analysis (SPARROW) to examine landscape characteristics influencing delivery of nitrogen from sources in a watershed to stream channels. Modelled landscape delivery ratio varies widely (by a factor of 4) among watersheds in the southeastern United States—higher in the western part (Tennessee, Alabama, and Mississippi) than in the eastern part, and the average value for the region is lower compared to other parts of the nation. When we model landscape delivery ratio as a continuous function of local-scale landscape characteristics, we estimate a spatial pattern that varies as a function of soil and climate characteristics but exhibits spatial structure in residuals (observed load minus predicted load). The spatial pattern of modelled landscape delivery ratio and the spatial pattern of residuals coincide spatially with Level III ecoregions and also with hydrologic landscape regions. Subsequent incorporation into the model of these frameworks as regional scale variables improves estimation of landscape delivery ratio, evidenced by reduced spatial bias in residuals, and suggests that cross-scale processes affect nitrogen attenuation on the landscape. The model-fitted coefficient values are logically consistent with the hypothesis that broad-scale classifications of hydrologic response help to explain differential rates of nitrogen attenuation, controlling for local-scale landscape characteristics. Negative model coefficients for hydrologic landscape regions where the primary flow path is shallow ground water suggest that a lower fraction of nitrogen mass will be delivered to streams; this relation is reversed for regions where the primary flow path is overland flow.

  19. Environmental drivers of spatial variation in whole-tree transpiration in an aspen-dominated upland-to-wetland forest gradient

    NASA Astrophysics Data System (ADS)

    Loranty, Michael M.; Mackay, D. Scott; Ewers, Brent E.; Adelman, Jonathan D.; Kruger, Eric L.

    2008-02-01

    Assumed representative center-of-stand measurements are typical inputs to models that scale forest transpiration to stand and regional extents. These inputs do not consider gradients in transpiration at stand boundaries or along moisture gradients and therefore potentially bias the large-scale estimates. We measured half-hourly sap flux (JS) for 173 trees in a spatially explicit cyclic sampling design across a topographically controlled gradient between a forested wetland and upland forest in northern Wisconsin. Our analyses focused on three dominant species in the site: quaking aspen (Populus tremuloides Michx), speckled alder (Alnus incana (DuRoi) Spreng), and white cedar (Thuja occidentalis L.). Sapwood area (AS) was used to scale JS to whole tree transpiration (EC). Because spatial patterns imply underlying processes, geostatistical analyses were employed to quantify patterns of spatial autocorrelation across the site. A simple Jarvis type model parameterized using a Monte Carlo sampling approach was used to simulate EC (EC-SIM). EC-SIM was compared with observed EC(EC-OBS) and found to reproduce both the temporal trends and spatial variance of canopy transpiration. EC-SIM was then used to examine spatial autocorrelation as a function of environmental drivers. We found no spatial autocorrelation in JS across the gradient from forested wetland to forested upland. EC was spatially autocorrelated and this was attributed to spatial variation in AS which suggests species spatial patterns are important for understanding spatial estimates of transpiration. However, the range of autocorrelation in EC-SIM decreased linearly with increasing vapor pressure deficit, implying that consideration of spatial variation in the sensitivity of canopy stomatal conductance to D is also key to accurately scaling up transpiration in space.

  20. An Investigation on the Spatial Variability of Manning Roughness Coefficients in Continental-scale River Routing Simulations

    NASA Astrophysics Data System (ADS)

    Luo, X.; Hong, Y.; Lei, X.; Leung, L. R.; Li, H. Y.; Getirana, A.

    2017-12-01

    As one essential component of the Earth system modeling, the continental-scale river routing computation plays an important role in applications of Earth system models, such as evaluating the impacts of the global change on water resources and flood hazards. The streamflow timing, which depends on the modeled flow velocities, can be an important aspect of the model results. River flow velocities have been estimated by using the Manning's equation where the Manning roughness coefficient is a key and sensitive parameter. In some early continental-scale studies, the Manning coefficient was determined with simplified methods, such as using a constant value for the entire basin. However, large spatial variability is expected in the Manning coefficients for the numerous channels composing the river network in distributed continental-scale hydrologic modeling. In the application of a continental-scale river routing model in the Amazon Basin, we use spatially varying Manning coefficients dependent on channel sizes and attempt to represent the dominant spatial variability of Manning coefficients. Based on the comparisons of simulation results with in situ streamflow records and remotely sensed river stages, we investigate the comparatively optimal Manning coefficients and explicitly demonstrate the advantages of using spatially varying Manning coefficients. The understanding obtained in this study could be helpful in the modeling of surface hydrology at regional to continental scales.

  1. Intermediate scale plasma density irregularities in the polar ionosphere inferred from radio occultation

    NASA Astrophysics Data System (ADS)

    Shume, E. B.; Komjathy, A.; Langley, R. B.; Verkhoglyadova, O. P.; Butala, M.; Mannucci, A. J.

    2014-12-01

    In this research, we report intermediate scale plasma density irregularities in the high-latitude ionosphere inferred from high-resolution radio occultation (RO) measurements in the CASSIOPE (CAScade Smallsat and IOnospheric Polar Explorer) - GPS (Global Positioning System) satellites radio link. The high inclination of the CASSIOPE satellite and high rate of signal receptionby the occultation antenna of the GPS Attitude, Positioning and Profiling (GAP) instrument on the Enhanced Polar Outflow Probe platform on CASSIOPE enable a high temporal and spatial resolution investigation of the dynamics of the polar ionosphere, magnetosphere-ionospherecoupling, solar wind effects, etc. with unprecedented details compared to that possible in the past. We have carried out high spatial resolution analysis in altitude and geomagnetic latitude of scintillation-producing plasma density irregularities in the polar ionosphere. Intermediate scale, scintillation-producing plasma density irregularities, which corresponds to 2 to 40 km spatial scales were inferred by applying multi-scale spectral analysis on the RO phase delay measurements. Using our multi-scale spectral analysis approach and Polar Operational Environmental Satellites (POES) and Defense Meteorological Satellite Program (DMSP) observations, we infer that the irregularity scales and phase scintillations have distinct features in the auroral oval and polar cap regions. In specific terms, we found that large length scales and and more intense phase scintillations are prevalent in the auroral oval compared to the polar cap region. Hence, the irregularity scales and phase scintillation characteristics are a function of the solar wind and the magnetospheric forcing. Multi-scale analysis may become a powerful diagnostic tool for characterizing how the ionosphere is dynamically driven by these factors.

  2. Dynamics of land change in India: a fine-scale spatial analysis

    NASA Astrophysics Data System (ADS)

    Meiyappan, P.; Roy, P. S.; Sharma, Y.; Jain, A. K.; Ramachandran, R.; Joshi, P. K.

    2015-12-01

    Land is scarce in India: India occupies 2.4% of worlds land area, but supports over 1/6th of worlds human and livestock population. This high population to land ratio, combined with socioeconomic development and increasing consumption has placed tremendous pressure on India's land resources for food, feed, and fuel. In this talk, we present contemporary (1985 to 2005) spatial estimates of land change in India using national-level analysis of Landsat imageries. Further, we investigate the causes of the spatial patterns of change using two complementary lines of evidence. First, we use statistical models estimated at macro-scale to understand the spatial relationships between land change patterns and their concomitant drivers. This analysis using our newly compiled extensive socioeconomic database at village level (~630,000 units), is 100x higher in spatial resolution compared to existing datasets, and covers over 200 variables. The detailed socioeconomic data enabled the fine-scale spatial analysis with Landsat data. Second, we synthesized information from over 130 survey based case studies on land use drivers in India to complement our macro-scale analysis. The case studies are especially useful to identify unobserved variables (e.g. farmer's attitude towards risk). Ours is the most detailed analysis of contemporary land change in India, both in terms of national extent, and the use of detailed spatial information on land change, socioeconomic factors, and synthesis of case studies.

  3. Teachers' Concepts of Spatial Scale: An International Comparison

    ERIC Educational Resources Information Center

    Jones, M. Gail; Paechter, Manuela; Yen, Chiung-Fen; Gardner, Grant; Taylor, Amy; Tretter, Thomas

    2013-01-01

    Metric scale is an important concept taught as part of science curricula across different countries. This study explored metric and relative (body-length) scale concepts of inservice ("N"?=?92) and preservice ("N"?=?134) teachers from Austria, and Taiwan, and their concepts were compared with those of teachers from the USA.…

  4. Beta diversity at different spatial scales: plant communities in organic and conventional agriculture.

    PubMed

    Gabriel, Doreen; Roschewitz, Indra; Tscharntke, Teja; Thies, Carsten

    2006-10-01

    Biodiversity studies that guide agricultural subsidy policy have generally compared farming systems at a single spatial scale: the field. However, diversity patterns vary across spatial scales. Here, we examined the effects of farming system (organic vs. conventional) and position in the field (edge vs. center) on plant species richness in wheat fields at three spatial scales. We quantified alpha-, beta-, and gamma-diversity at the microscale in 800 plots, at the mesoscale in 40 fields, and at the macroscale in three regions using the additive partitioning approach, and evaluated the relative contribution of beta-diversity at each spatial scale to total observed species richness. We found that alpha-, beta-, and gamma-diversity were higher in organic than conventional fields and higher at the field edge than in the field center at all spatial scales. In both farming systems, beta-diversity at the meso- and macroscale explained most of the overall species richness (up to 37% and 25%, respectively), indicating considerable differences in community composition among fields and regions due to environmental heterogeneity. The spatial scale at which beta-diversity contributed the most to overall species richness differed between rare and common species. Total richness of rare species (present in < or = 5% of total samples) was mainly explained by differences in community composition at the meso- and macroscale (up to 27% and 48%, respectively), but only in organic fields. Total richness of common species (present in > or = 25% of total samples) was explained by differences in community composition at the micro- and mesoscale (up to 29% and 47%, respectively), i.e., among plots and fields, independent of farming system. Our results show that organic farming made the greatest contribution to total species richness at the meso (among fields) and macro (among regions) scale due to environmental heterogeneity. Hence, agri-environment schemes should exploit this large-scale contribution of beta-diversity by tailoring schemes at regional scales to maximize dissimilarity between conservation areas using geographic information systems rather than focusing entirely at the classical local-field scale, which is the current practice.

  5. Comparative Analysis of GF-1 and HJ-1 Data to Derive the Optimal Scale for Monitoring Heavy Metal Stress in Rice.

    PubMed

    Wang, Dongmin; Liu, Xiangnan

    2018-03-06

    Remote sensing can actively monitor heavy metal contamination in crops, but with the increase of satellite sensors, the optimal scale for monitoring heavy metal stress in rice is still unknown. This study focused on identifying the optimal scale by comparing the ability to detect heavy metal stress in rice at various spatial scales. The 2 m, 8 m, and 16 m resolution GF-1 (China) data and the 30 m resolution HJ-1 (China) data were used to invert leaf area index (LAI). The LAI was the input parameter of the World Food Studies (WOFOST) model, and we obtained the dry weight of storage organs (WSO) and dry weight of roots (WRT) through the assimilation method; then, the mass ratio of rice storage organs and roots (SORMR) was calculated. Through the comparative analysis of SORMR at each spatial scale of data, we determined the optimal scale to monitor heavy metal stress in rice. The following conclusions were drawn: (1) SORMR could accurately and effectively monitor heavy metal stress; (2) the 8 m and 16 m images from GF-1 were suitable for monitoring heavy metal stress in rice; (3) 16 m was considered the optimal scale to assess heavy metal stress in rice.

  6. Quantifying the imprint of mesoscale and synoptic-scale atmospheric transport on total column carbon dioxide measurements

    NASA Astrophysics Data System (ADS)

    Torres, A. D.; Keppel-Aleks, G.; Doney, S. C.; Feng, S.; Lauvaux, T.; Fendrock, M. A.; Rheuben, J.

    2017-12-01

    Remote sensing instruments provide an unprecedented density of observations of the atmospheric CO2 column average mole fraction (denoted as XCO2), which can be used to constrain regional scale carbon fluxes. Inferring fluxes from XCO2 observations is challenging, as measurements and inversion methods are sensitive to not only the imprint local and large-scale fluxes, but also mesoscale and synoptic-scale atmospheric transport. Quantifying the fine-scale variability in XCO2 from mesoscale and synoptic-scale atmospheric transport will likely improve overall error estimates from flux inversions by improving estimates of representation errors that occur when XCO2 observations are compared to modeled XCO2 in relatively coarse transport models. Here, we utilize various statistical methods to quantify the imprint of atmospheric transport on XCO2 observations. We compare spatial variations along Orbiting Carbon Observatory (OCO-2) satellite tracks to temporal variations observed by the Total Column Carbon Observing Network (TCCON). We observe a coherent seasonal cycle of both within-day temporal and fine-scale spatial variability (of order 10 km) of XCO2 from these two datasets, suggestive of the imprint of mesoscale systems. To account for other potential sources of error in XCO2 retrieval, we compare observed temporal and spatial variations of XCO2 to high-resolution output from the Weather Research and Forecasting (WRF) model run at 9 km resolution. In both simulations and observations, the Northern hemisphere mid-latitude XCO2 showed peak variability during the growing season when atmospheric gradients are largest. These results are qualitatively consistent with our expectations of seasonal variations of the imprint of synoptic and mesoscale atmospheric transport on XCO2 observations; suggesting that these statistical methods could be sensitive to the imprint of atmospheric transport on XCO2 observations.

  7. Cross-scale interactions affect tree growth and intrinsic water ...

    EPA Pesticide Factsheets

    1. We investigated the potential of cross-scale interactions to affect the outcome of density reduction in a large-scale silvicultural experiment. 2. We measured tree growth and intrinsic water-use efficiency (iWUE) based on stable carbon isotopes (13C) to investigate the impacts of thinning across a range of progressively finer spatial scales: site, stand, hillslope position, and neighborhood position. In particular, we focused on the influence of thinning beyond the boundaries of thinned stands to include impacts on downslope and neighboring stands across sites varying in soil moisture. 3. Trees at the wet site responded to thinning with increased growth when compared with trees at the dry site. Additionally, trees in thinned stands at the dry site responded with increased iWUE while trees in thinned stands at the wet site showed no difference in iWUE compared to unthinned stands. 4. We hypothesized that water is not the primary limiting factor for growth at our sites, but that thinning released other resources, such as growing space or nutrients to drive the growth response. At progressively finer spatial scales we found that the responses of trees was not driven by hillslope location (i.e., downslope of thinning) but to changes in local neighborhood tree density. 5. The results of this study demonstrated that water can be viewed as an “agent” that allows us to investigate cross-scale interactions as it links coarse to finer spatial scales and vice ver

  8. A spatial picture of the synthetic large-scale motion from dynamic roughness

    NASA Astrophysics Data System (ADS)

    Huynh, David; McKeon, Beverley

    2017-11-01

    Jacobi and McKeon (2011) set up a dynamic roughness apparatus to excite a synthetic, travelling wave-like disturbance in a wind tunnel, boundary layer study. In the present work, this dynamic roughness has been adapted for a flat-plate, turbulent boundary layer experiment in a water tunnel. A key advantage of operating in water as opposed to air is the longer flow timescales. This makes accessible higher non-dimensional actuation frequencies and correspondingly shorter synthetic length scales, and is thus more amenable to particle image velocimetry. As a result, this experiment provides a novel spatial picture of the synthetic mode, the coupled small scales, and their streamwise development. It is demonstrated that varying the roughness actuation frequency allows for significant tuning of the streamwise wavelength of the synthetic mode, with a range of 3 δ-13 δ being achieved. Employing a phase-locked decomposition, spatial snapshots are constructed of the synthetic large scale and used to analyze its streamwise behavior. Direct spatial filtering is used to separate the synthetic large scale and the related small scales, and the results are compared to those obtained by temporal filtering that invokes Taylor's hypothesis. The support of AFOSR (Grant # FA9550-16-1-0361) is gratefully acknowledged.

  9. A comparison of sap flux-based evapotranspiration estimates with catchment-scale water balance

    Treesearch

    Chelcy R. Ford; Robert M. Hubbard; Brian D. Kloeppel; James M. Vose

    2007-01-01

    Many researchers are using sap flux to estimate tree-level transpiration, and to scale to stand- and catchment-level transpiration; yet studies evaluating the comparability of sap flux-based estimates of transpiration (E) with alternative methods for estimating Et at this spatial scale are rare. Our ability to...

  10. Effects of land use pattern on soil water in revegetation watersheds in semi-arid Chinese Loess Plateau

    NASA Astrophysics Data System (ADS)

    Yang, Lei; Chen, Liding; Wei, Wei

    2017-04-01

    Soil water stored below rainfall infiltration depth is a reliable water resource for plant growth in arid and semi-arid regions. For decreasing serious soil erosion, large-scale human-introduced vegetation restoration was initiated in Chinese Loess Plateau in late 1990s. However, these activities may result in excessive water consumption and soil water deficit if no appropriate scientific guidance were offered. This in turn impacts the regional ecological restoration and sustainable management of water resources. In this study, soil water content data in depth of 0-5 m was obtained by long-term field observation and geostatistical method in 6 small watersheds covered with different land use pattern. Profile characteristics and spatial-temporal patterns of soil water were compared between different land use types, hillslopes, and watersheds. The results showed that: (1) Introduced vegetation consumed excessive amount of water when compared with native grassland and farmland, and induced temporally stable soil desiccation in depth of 0-5 m. The introduced vegetation decreased soil water content to levels lower than the reference value representing no human impact in all soil layers. (2) The analysis of differences in soil water at hillslope and watershed scales indicated that land use determined the spatial and temporal variability of soil water. Soil water at watershed scale increased with the increasing area of farmland, and decreased with increasing percentage of introduced vegetation. Land use structure determined the soil water condition and land use pattern determined the spatial-temporal variability of soil water at watershed scale. (3) Large-scale revegetation with introduced vegetation diminished the spatial heterogeneity of soil water at different scales. Land use pattern adjustment could be used to improve the water resources management and maintain the sustainability of vegetation restoration.

  11. Last millennium Northern Hemisphere summer temperatures from tree rings: Part II, spatially resolved reconstructions

    NASA Astrophysics Data System (ADS)

    Anchukaitis, Kevin J.; Wilson, Rob; Briffa, Keith R.; Büntgen, Ulf; Cook, Edward R.; D'Arrigo, Rosanne; Davi, Nicole; Esper, Jan; Frank, David; Gunnarson, Björn E.; Hegerl, Gabi; Helama, Samuli; Klesse, Stefan; Krusic, Paul J.; Linderholm, Hans W.; Myglan, Vladimir; Osborn, Timothy J.; Zhang, Peng; Rydval, Milos; Schneider, Lea; Schurer, Andrew; Wiles, Greg; Zorita, Eduardo

    2017-05-01

    Climate field reconstructions from networks of tree-ring proxy data can be used to characterize regional-scale climate changes, reveal spatial anomaly patterns associated with atmospheric circulation changes, radiative forcing, and large-scale modes of ocean-atmosphere variability, and provide spatiotemporal targets for climate model comparison and evaluation. Here we use a multiproxy network of tree-ring chronologies to reconstruct spatially resolved warm season (May-August) mean temperatures across the extratropical Northern Hemisphere (40-90°N) using Point-by-Point Regression (PPR). The resulting annual maps of temperature anomalies (750-1988 CE) reveal a consistent imprint of volcanism, with 96% of reconstructed grid points experiencing colder conditions following eruptions. Solar influences are detected at the bicentennial (de Vries) frequency, although at other time scales the influence of insolation variability is weak. Approximately 90% of reconstructed grid points show warmer temperatures during the Medieval Climate Anomaly when compared to the Little Ice Age, although the magnitude varies spatially across the hemisphere. Estimates of field reconstruction skill through time and over space can guide future temporal extension and spatial expansion of the proxy network.

  12. Confronting weather and climate models with observational data from soil moisture networks over the United States

    PubMed Central

    Dirmeyer, Paul A.; Wu, Jiexia; Norton, Holly E.; Dorigo, Wouter A.; Quiring, Steven M.; Ford, Trenton W.; Santanello, Joseph A.; Bosilovich, Michael G.; Ek, Michael B.; Koster, Randal D.; Balsamo, Gianpaolo; Lawrence, David M.

    2018-01-01

    Four land surface models in uncoupled and coupled configurations are compared to observations of daily soil moisture from 19 networks in the conterminous United States to determine the viability of such comparisons and explore the characteristics of model and observational data. First, observations are analyzed for error characteristics and representation of spatial and temporal variability. Some networks have multiple stations within an area comparable to model grid boxes; for those we find that aggregation of stations before calculation of statistics has little effect on estimates of variance, but soil moisture memory is sensitive to aggregation. Statistics for some networks stand out as unlike those of their neighbors, likely due to differences in instrumentation, calibration and maintenance. Buried sensors appear to have less random error than near-field remote sensing techniques, and heat dissipation sensors show less temporal variability than other types. Model soil moistures are evaluated using three metrics: standard deviation in time, temporal correlation (memory) and spatial correlation (length scale). Models do relatively well in capturing large-scale variability of metrics across climate regimes, but poorly reproduce observed patterns at scales of hundreds of kilometers and smaller. Uncoupled land models do no better than coupled model configurations, nor do reanalyses outperform free-running models. Spatial decorrelation scales are found to be difficult to diagnose. Using data for model validation, calibration or data assimilation from multiple soil moisture networks with different types of sensors and measurement techniques requires great caution. Data from models and observations should be put on the same spatial and temporal scales before comparison. PMID:29645013

  13. Confronting Weather and Climate Models with Observational Data from Soil Moisture Networks over the United States

    NASA Technical Reports Server (NTRS)

    Dirmeyer, Paul A.; Wu, Jiexia; Norton, Holly E.; Dorigo, Wouter A.; Quiring, Steven M.; Ford, Trenton W.; Santanello, Joseph A., Jr.; Bosilovich, Michael G.; Ek, Michael B.; Koster, Randal Dean; hide

    2016-01-01

    Four land surface models in uncoupled and coupled configurations are compared to observations of daily soil moisture from 19 networks in the conterminous United States to determine the viability of such comparisons and explore the characteristics of model and observational data. First, observations are analyzed for error characteristics and representation of spatial and temporal variability. Some networks have multiple stations within an area comparable to model grid boxes; for those we find that aggregation of stations before calculation of statistics has little effect on estimates of variance, but soil moisture memory is sensitive to aggregation. Statistics for some networks stand out as unlike those of their neighbors, likely due to differences in instrumentation, calibration and maintenance. Buried sensors appear to have less random error than near-field remote sensing techniques, and heat dissipation sensors show less temporal variability than other types. Model soil moistures are evaluated using three metrics: standard deviation in time, temporal correlation (memory) and spatial correlation (length scale). Models do relatively well in capturing large-scale variability of metrics across climate regimes, but poorly reproduce observed patterns at scales of hundreds of kilometers and smaller. Uncoupled land models do no better than coupled model configurations, nor do reanalyses out perform free-running models. Spatial decorrelation scales are found to be difficult to diagnose. Using data for model validation, calibration or data assimilation from multiple soil moisture networks with different types of sensors and measurement techniques requires great caution. Data from models and observations should be put on the same spatial and temporal scales before comparison.

  14. Confronting weather and climate models with observational data from soil moisture networks over the United States.

    PubMed

    Dirmeyer, Paul A; Wu, Jiexia; Norton, Holly E; Dorigo, Wouter A; Quiring, Steven M; Ford, Trenton W; Santanello, Joseph A; Bosilovich, Michael G; Ek, Michael B; Koster, Randal D; Balsamo, Gianpaolo; Lawrence, David M

    2016-04-01

    Four land surface models in uncoupled and coupled configurations are compared to observations of daily soil moisture from 19 networks in the conterminous United States to determine the viability of such comparisons and explore the characteristics of model and observational data. First, observations are analyzed for error characteristics and representation of spatial and temporal variability. Some networks have multiple stations within an area comparable to model grid boxes; for those we find that aggregation of stations before calculation of statistics has little effect on estimates of variance, but soil moisture memory is sensitive to aggregation. Statistics for some networks stand out as unlike those of their neighbors, likely due to differences in instrumentation, calibration and maintenance. Buried sensors appear to have less random error than near-field remote sensing techniques, and heat dissipation sensors show less temporal variability than other types. Model soil moistures are evaluated using three metrics: standard deviation in time, temporal correlation (memory) and spatial correlation (length scale). Models do relatively well in capturing large-scale variability of metrics across climate regimes, but poorly reproduce observed patterns at scales of hundreds of kilometers and smaller. Uncoupled land models do no better than coupled model configurations, nor do reanalyses outperform free-running models. Spatial decorrelation scales are found to be difficult to diagnose. Using data for model validation, calibration or data assimilation from multiple soil moisture networks with different types of sensors and measurement techniques requires great caution. Data from models and observations should be put on the same spatial and temporal scales before comparison.

  15. Disentangling Puzzles of Spatial Scales and Participation in Environmental Governance—The Case of Governance Re-scaling Through the European Water Framework Directive

    NASA Astrophysics Data System (ADS)

    Newig, Jens; Schulz, Daniel; Jager, Nicolas W.

    2016-12-01

    This article attempts to shed new light on prevailing puzzles of spatial scales in multi-level, participatory governance as regards the democratic legitimacy and environmental effectiveness of governance systems. We focus on the governance re-scaling by the European Water Framework Directive, which introduced new governance scales (mandated river basin management) and demands consultation of citizens and encourages `active involvement' of stakeholders. This allows to examine whether and how re-scaling through deliberate governance interventions impacts on democratic legitimacy and effective environmental policy delivery. To guide the enquiry, this article organizes existing—partly contradictory—claims on the relation of scale, democratic legitimacy, and environmental effectiveness into three clusters of mechanisms, integrating insights from multi-level governance, social-ecological systems, and public participation. We empirically examine Water Framework Directive implementation in a comparative case study of multi-level systems in the light of the suggested mechanisms. We compare two planning areas in Germany: North Rhine Westphalia and Lower Saxony. Findings suggest that the Water Framework Directive did have some impact on institutionalizing hydrological scales and participation. Local participation appears generally both more effective and legitimate than on higher levels, pointing to the need for yet more tailored multi-level governance approaches, depending on whether environmental knowledge or advocacy is sought. We find mixed results regarding the potential of participation to bridge spatial `misfits' between ecological and administrative scales of governance, depending on the historical institutionalization of governance on ecological scales. Polycentricity, finally, appeared somewhat favorable in effectiveness terms with some distinct differences regarding polycentricity in planning vs. polycentricity in implementation.

  16. Disentangling Puzzles of Spatial Scales and Participation in Environmental Governance-The Case of Governance Re-scaling Through the European Water Framework Directive.

    PubMed

    Newig, Jens; Schulz, Daniel; Jager, Nicolas W

    2016-12-01

    This article attempts to shed new light on prevailing puzzles of spatial scales in multi-level, participatory governance as regards the democratic legitimacy and environmental effectiveness of governance systems. We focus on the governance re-scaling by the European Water Framework Directive, which introduced new governance scales (mandated river basin management) and demands consultation of citizens and encourages 'active involvement' of stakeholders. This allows to examine whether and how re-scaling through deliberate governance interventions impacts on democratic legitimacy and effective environmental policy delivery. To guide the enquiry, this article organizes existing-partly contradictory-claims on the relation of scale, democratic legitimacy, and environmental effectiveness into three clusters of mechanisms, integrating insights from multi-level governance, social-ecological systems, and public participation. We empirically examine Water Framework Directive implementation in a comparative case study of multi-level systems in the light of the suggested mechanisms. We compare two planning areas in Germany: North Rhine Westphalia and Lower Saxony. Findings suggest that the Water Framework Directive did have some impact on institutionalizing hydrological scales and participation. Local participation appears generally both more effective and legitimate than on higher levels, pointing to the need for yet more tailored multi-level governance approaches, depending on whether environmental knowledge or advocacy is sought. We find mixed results regarding the potential of participation to bridge spatial 'misfits' between ecological and administrative scales of governance, depending on the historical institutionalization of governance on ecological scales. Polycentricity, finally, appeared somewhat favorable in effectiveness terms with some distinct differences regarding polycentricity in planning vs. polycentricity in implementation.

  17. A generic method for improving the spatial interoperability of medical and ecological databases.

    PubMed

    Ghenassia, A; Beuscart, J B; Ficheur, G; Occelli, F; Babykina, E; Chazard, E; Genin, M

    2017-10-03

    The availability of big data in healthcare and the intensive development of data reuse and georeferencing have opened up perspectives for health spatial analysis. However, fine-scale spatial studies of ecological and medical databases are limited by the change of support problem and thus a lack of spatial unit interoperability. The use of spatial disaggregation methods to solve this problem introduces errors into the spatial estimations. Here, we present a generic, two-step method for merging medical and ecological databases that avoids the use of spatial disaggregation methods, while maximizing the spatial resolution. Firstly, a mapping table is created after one or more transition matrices have been defined. The latter link the spatial units of the original databases to the spatial units of the final database. Secondly, the mapping table is validated by (1) comparing the covariates contained in the two original databases, and (2) checking the spatial validity with a spatial continuity criterion and a spatial resolution index. We used our novel method to merge a medical database (the French national diagnosis-related group database, containing 5644 spatial units) with an ecological database (produced by the French National Institute of Statistics and Economic Studies, and containing with 36,594 spatial units). The mapping table yielded 5632 final spatial units. The mapping table's validity was evaluated by comparing the number of births in the medical database and the ecological databases in each final spatial unit. The median [interquartile range] relative difference was 2.3% [0; 5.7]. The spatial continuity criterion was low (2.4%), and the spatial resolution index was greater than for most French administrative areas. Our innovative approach improves interoperability between medical and ecological databases and facilitates fine-scale spatial analyses. We have shown that disaggregation models and large aggregation techniques are not necessarily the best ways to tackle the change of support problem.

  18. The spatial and temporal domains of modern ecology.

    PubMed

    Estes, Lyndon; Elsen, Paul R; Treuer, Timothy; Ahmed, Labeeb; Caylor, Kelly; Chang, Jason; Choi, Jonathan J; Ellis, Erle C

    2018-05-01

    To understand ecological phenomena, it is necessary to observe their behaviour across multiple spatial and temporal scales. Since this need was first highlighted in the 1980s, technology has opened previously inaccessible scales to observation. To help to determine whether there have been corresponding changes in the scales observed by modern ecologists, we analysed the resolution, extent, interval and duration of observations (excluding experiments) in 348 studies that have been published between 2004 and 2014. We found that observational scales were generally narrow, because ecologists still primarily use conventional field techniques. In the spatial domain, most observations had resolutions ≤1 m 2 and extents ≤10,000 ha. In the temporal domain, most observations were either unreplicated or infrequently repeated (>1 month interval) and ≤1 year in duration. Compared with studies conducted before 2004, observational durations and resolutions appear largely unchanged, but intervals have become finer and extents larger. We also found a large gulf between the scales at which phenomena are actually observed and the scales those observations ostensibly represent, raising concerns about observational comprehensiveness. Furthermore, most studies did not clearly report scale, suggesting that it remains a minor concern. Ecologists can better understand the scales represented by observations by incorporating autocorrelation measures, while journals can promote attentiveness to scale by implementing scale-reporting standards.

  19. Evaluation of spatial models to predict vulnerability of forest birds to brood parasitism by cowbirds

    USGS Publications Warehouse

    Gustafson, E.J.; Knutson, M.G.; Niemi, G.J.; Friberg, M.

    2002-01-01

    We constructed alternative spatial models at two scales to predict Brown-headed Cowbird (Molothrus ater) parasitism rates from land cover maps. The local-scale models tested competing hypotheses about the relationship between cowbird parasitism and distance of host nests from a forest edge (forest-nonforest boundary). The landscape models tested competing hypotheses about how landscape features (e.g., forests, agricultural fields) interact to determine rates of cowbird parasitism. The models incorporate spatial neighborhoods with a radius of 2.5 km in their formulation, reflecting the scale of the majority of cowbird commuting activity. Field data on parasitism by cowbirds (parasitism rate and number of cowbird eggs per nest) were collected at 28 sites in the Driftless Area Ecoregion of Wisconsin, Minnesota, and Iowa and were compared to the predictions of the alternative models. At the local scale, there was a significant positive relationship between cowbird parasitism and mean distance of nest sites from the forest edge. At the landscape scale, the best fitting models were the forest-dependent and forest-fragmentation-dependent models, in which more heavily forested and less fragmented landscapes had higher parasitism rates. However, much of the explanatory power of these models results from the inclusion of the local-scale relationship in these models. We found lower rates of cowbird parasitism than did most Midwestern studies, and we identified landscape patterns of cowbird parasitism that are opposite to those reported in several other studies of Midwestern songbirds. We caution that cowbird parasitism patterns can be unpredictable, depending upon ecoregional location and the spatial extent, and that our models should be tested in other ecoregions before they are applied there. Our study confirms that cowbird biology has a strong spatial component, and that improved spatial models applied at multiple spatial scales will be required to predict the effects of landscape and forest management on cowbird parasitism of forest birds.

  20. Spatial Distribution of Coffee Wilt Disease Under Roguing and Replanting Conditions: A Case Study from Kaweri Estate in Uganda.

    PubMed

    Pinard, F; Makune, S E; Campagne, P; Mwangi, J

    2016-11-01

    Based on time and spatial dynamic considerations, this study evaluates the potential role of short- and long-distance dispersal in the spread of coffee wilt disease (CWD) in a large commercial Robusta coffee estate in Uganda (Kaweri, 1,755 ha) over a 4-year period (2008 to 2012). In monthly surveys, total disease incidence, expansion of infection foci, and the occurrence of isolated infected trees were recorded and submitted to spatial analysis. Incidence was higher and disease progression faster in old coffee plantings compared with young plantings, indicating a lack of efficiency of roguing for reducing disease development in old plantings. At large spatial scale (approximately 1 km), Moran indices (both global and local) revealed the existence of clusters characterized by contrasting disease incidences. This suggested that local environmental conditions were heterogeneous or there were spatial interactions among blocks. At finer spatial scale (approximately 200 m), O-ring statistics revealed positive correlation between distant infection sites across distances as great as 60 m. Although these observations indicate the role of short-distance dispersal in foci expansion, dispersal at greater distances (>20 m) appeared to also contribute to both initiation of new foci and disease progression at coarser spatial scales. Therefore, our results suggested the role of aerial dispersal in CWD progression.

  1. Damage spreading in spatial and small-world random Boolean networks

    NASA Astrophysics Data System (ADS)

    Lu, Qiming; Teuscher, Christof

    2014-02-01

    The study of the response of complex dynamical social, biological, or technological networks to external perturbations has numerous applications. Random Boolean networks (RBNs) are commonly used as a simple generic model for certain dynamics of complex systems. Traditionally, RBNs are interconnected randomly and without considering any spatial extension and arrangement of the links and nodes. However, most real-world networks are spatially extended and arranged with regular, power-law, small-world, or other nonrandom connections. Here we explore the RBN network topology between extreme local connections, random small-world, and pure random networks, and study the damage spreading with small perturbations. We find that spatially local connections change the scaling of the Hamming distance at very low connectivities (K¯≪1) and that the critical connectivity of stability Ks changes compared to random networks. At higher K¯, this scaling remains unchanged. We also show that the Hamming distance of spatially local networks scales with a power law as the system size N increases, but with a different exponent for local and small-world networks. The scaling arguments for small-world networks are obtained with respect to the system sizes and strength of spatially local connections. We further investigate the wiring cost of the networks. From an engineering perspective, our new findings provide the key design trade-offs between damage spreading (robustness), the network's wiring cost, and the network's communication characteristics.

  2. Multi-Point Measurements to Characterize Radiation Belt Electron Precipitation Loss

    NASA Astrophysics Data System (ADS)

    Blum, L. W.

    2017-12-01

    Multipoint measurements in the inner magnetosphere allow the spatial and temporal evolution of various particle populations and wave modes to be disentangled. To better characterize and quantify radiation belt precipitation loss, we utilize multi-point measurements both to study precipitating electrons directly as well as the potential drivers of this loss process. Magnetically conjugate CubeSat and balloon measurements are combined to estimate of the temporal and spatial characteristics of dusk-side precipitation features and quantify loss due to these events. To then understand the drivers of precipitation events, and what determines their spatial structure, we utilize measurements from the dual Van Allen Probes to estimate spatial and temporal scales of various wave modes in the inner magnetosphere, and compare these to precipitation characteristics. The structure, timing, and spatial extent of waves are compared to those of MeV electron precipitation during a few individual events to determine when and where EMIC waves cause radiation belt electron precipitation. Magnetically conjugate measurements provide observational support of the theoretical picture of duskside interaction of EMIC waves and MeV electrons leading to radiation belt loss. Finally, understanding the drivers controlling the spatial scales of wave activity in the inner magnetosphere is critical for uncovering the underlying physics behind the wave generation as well as for better predicting where and when waves will be present. Again using multipoint measurements from the Van Allen Probes, we estimate the spatial and temporal extents and evolution of plasma structures and their gradients in the inner magnetosphere, to better understand the drivers of magnetospheric wave characteristic scales. In particular, we focus on EMIC waves and the plasma parameters important for their growth, namely cold plasma density and cool and warm ion density, anisotropy, and composition.

  3. Spatial scales of bacterial community diversity at cold seeps (Eastern Mediterranean Sea)

    PubMed Central

    Pop Ristova, Petra; Wenzhöfer, Frank; Ramette, Alban; Felden, Janine; Boetius, Antje

    2015-01-01

    Cold seeps are highly productive, fragmented marine ecosystems that form at the seafloor around hydrocarbon emission pathways. The products of microbial utilization of methane and other hydrocarbons fuel rich chemosynthetic communities at these sites, with much higher respiration rates compared with the surrounding deep-sea floor. Yet little is known as to the richness, composition and spatial scaling of bacterial communities of cold seeps compared with non-seep communities. Here we assessed the bacterial diversity across nine different cold seeps in the Eastern Mediterranean deep-sea and surrounding seafloor areas. Community similarity analyses were carried out based on automated ribosomal intergenic spacer analysis (ARISA) fingerprinting and high-throughput 454 tag sequencing and were combined with in situ and ex situ geochemical analyses across spatial scales of a few tens of meters to hundreds of kilometers. Seep communities were dominated by Deltaproteobacteria, Epsilonproteobacteria and Gammaproteobacteria and shared, on average, 36% of bacterial types (ARISA OTUs (operational taxonomic units)) with communities from nearby non-seep deep-sea sediments. Bacterial communities of seeps were significantly different from those of non-seep sediments. Within cold seep regions on spatial scales of only tens to hundreds of meters, the bacterial communities differed considerably, sharing <50% of types at the ARISA OTU level. Their variations reflected differences in porewater sulfide concentrations from anaerobic degradation of hydrocarbons. This study shows that cold seep ecosystems contribute substantially to the microbial diversity of the deep-sea. PMID:25500510

  4. Scale-up of ecological experiments: Density variation in the mobile bivalve Macomona liliana

    USGS Publications Warehouse

    Schneider, Davod C.; Walters, R.; Thrush, S.; Dayton, P.

    1997-01-01

    At present the problem of scaling up from controlled experiments (necessarily at a small spatial scale) to questions of regional or global importance is perhaps the most pressing issue in ecology. Most of the proposed techniques recommend iterative cycling between theory and experiment. We present a graphical technique that facilitates this cycling by allowing the scope of experiments, surveys, and natural history observations to be compared to the scope of models and theory. We apply the scope analysis to the problem of understanding the population dynamics of a bivalve exposed to environmental stress at the scale of a harbour. Previous lab and field experiments were found not to be 1:1 scale models of harbour-wide processes. Scope analysis allowed small scale experiments to be linked to larger scale surveys and to a spatially explicit model of population dynamics.

  5. Goal-oriented robot navigation learning using a multi-scale space representation.

    PubMed

    Llofriu, M; Tejera, G; Contreras, M; Pelc, T; Fellous, J M; Weitzenfeld, A

    2015-12-01

    There has been extensive research in recent years on the multi-scale nature of hippocampal place cells and entorhinal grid cells encoding which led to many speculations on their role in spatial cognition. In this paper we focus on the multi-scale nature of place cells and how they contribute to faster learning during goal-oriented navigation when compared to a spatial cognition system composed of single scale place cells. The task consists of a circular arena with a fixed goal location, in which a robot is trained to find the shortest path to the goal after a number of learning trials. Synaptic connections are modified using a reinforcement learning paradigm adapted to the place cells multi-scale architecture. The model is evaluated in both simulation and physical robots. We find that larger scale and combined multi-scale representations favor goal-oriented navigation task learning. Copyright © 2015 Elsevier Ltd. All rights reserved.

  6. Horizontal Residual Mean Circulation: Evaluation of Spatial Correlations in Coarse Resolution Ocean Models

    NASA Astrophysics Data System (ADS)

    Li, Y.; McDougall, T. J.

    2016-02-01

    Coarse resolution ocean models lack knowledge of spatial correlations between variables on scales smaller than the grid scale. Some researchers have shown that these spatial correlations play a role in the poleward heat flux. In order to evaluate the poleward transport induced by the spatial correlations at a fixed horizontal position, an equation is obtained to calculate the approximate transport from velocity gradients. The equation involves two terms that can be added to the quasi-Stokes streamfunction (based on temporal correlations) to incorporate the contribution of spatial correlations. Moreover, these new terms do not need to be parameterized and is ready to be evaluated by using model data directly. In this study, data from a high resolution ocean model have been used to estimate the accuracy of this HRM approach for improving the horizontal property fluxes in coarse-resolution ocean models. A coarse grid is formed by sub-sampling and box-car averaging the fine grid scale. The transport calculated on the coarse grid is then compared to the transport on original high resolution grid scale accumulated over a corresponding number of grid boxes. The preliminary results have shown that the estimate on coarse resolution grids roughly match the corresponding transports on high resolution grids.

  7. Hierarchical analysis of spatial pattern and processes of Douglas-fir forests. Ph.D. Thesis, 10 Sep. 1991 Abstract Only

    NASA Technical Reports Server (NTRS)

    Bradshaw, G. A.

    1995-01-01

    There has been an increased interest in the quantification of pattern in ecological systems over the past years. This interest is motivated by the desire to construct valid models which extend across many scales. Spatial methods must quantify pattern, discriminate types of pattern, and relate hierarchical phenomena across scales. Wavelet analysis is introduced as a method to identify spatial structure in ecological transect data. The main advantage of the wavelet transform over other methods is its ability to preserve and display hierarchical information while allowing for pattern decomposition. Two applications of wavelet analysis are illustrated, as a means to: (1) quantify known spatial patterns in Douglas-fir forests at several scales, and (2) construct spatially-explicit hypotheses regarding pattern generating mechanisms. Application of the wavelet variance, derived from the wavelet transform, is developed for forest ecosystem analysis to obtain additional insight into spatially-explicit data. Specifically, the resolution capabilities of the wavelet variance are compared to the semi-variogram and Fourier power spectra for the description of spatial data using a set of one-dimensional stationary and non-stationary processes. The wavelet cross-covariance function is derived from the wavelet transform and introduced as a alternative method for the analysis of multivariate spatial data of understory vegetation and canopy in Douglas-fir forests of the western Cascades of Oregon.

  8. Spatial clustering of mental disorders and associated characteristics of the neighbourhood context in Malmö, Sweden, in 2001

    PubMed Central

    Chaix, Basile; Leyland, Alastair H; Sabel, Clive E; Chauvin, Pierre; Råstam, Lennart; Kristersson, Håkan; Merlo, Juan

    2006-01-01

    Study objective Previous research provides preliminary evidence of spatial variations of mental disorders and associations between neighbourhood social context and mental health. This study expands past literature by (1) using spatial techniques, rather than multilevel models, to compare the spatial distributions of two groups of mental disorders (that is, disorders due to psychoactive substance use, and neurotic, stress related, and somatoform disorders); and (2) investigating the independent impact of contextual deprivation and neighbourhood social disorganisation on mental health, while assessing both the magnitude and the spatial scale of these effects. Design Using different spatial techniques, the study investigated mental disorders due to psychoactive substance use, and neurotic disorders. Participants All 89 285 persons aged 40–69 years residing in Malmö, Sweden, in 2001, geolocated to their place of residence. Main results The spatial scan statistic identified a large cluster of increased prevalence in a similar location for the two mental disorders in the northern part of Malmö. However, hierarchical geostatistical models showed that the two groups of disorders exhibited a different spatial distribution, in terms of both magnitude and spatial scale. Mental disorders due to substance consumption showed larger neighbourhood variations, and varied in space on a larger scale, than neurotic disorders. After adjustment for individual factors, the risk of substance related disorders increased with neighbourhood deprivation and neighbourhood social disorganisation. The risk of neurotic disorders only increased with contextual deprivation. Measuring contextual factors across continuous space, it was found that these associations operated on a local scale. Conclusions Taking space into account in the analyses permitted deeper insight into the contextual determinants of mental disorders. PMID:16614334

  9. Understanding the Spatial Scale of Genetic Connectivity at Sea: Unique Insights from a Land Fish and a Meta-Analysis.

    PubMed

    Cooke, Georgina M; Schlub, Timothy E; Sherwin, William B; Ord, Terry J

    2016-01-01

    Quantifying the spatial scale of population connectivity is important for understanding the evolutionary potential of ecologically divergent populations and for designing conservation strategies to preserve those populations. For marine organisms like fish, the spatial scale of connectivity is generally set by a pelagic larval phase. This has complicated past estimates of connectivity because detailed information on larval movements are difficult to obtain. Genetic approaches provide a tractable alternative and have the added benefit of estimating directly the reproductive isolation of populations. In this study, we leveraged empirical estimates of genetic differentiation among populations with simulations and a meta-analysis to provide a general estimate of the spatial scale of genetic connectivity in marine environments. We used neutral genetic markers to first quantify the genetic differentiation of ecologically-isolated adult populations of a land dwelling fish, the Pacific leaping blenny (Alticus arnoldorum), where marine larval dispersal is the only probable means of connectivity among populations. We then compared these estimates to simulations of a range of marine dispersal scenarios and to collated FST and distance data from the literature for marine fish across diverse spatial scales. We found genetic connectivity at sea was extensive among marine populations and in the case of A. arnoldorum, apparently little affected by the presence of ecological barriers. We estimated that ~5000 km (with broad confidence intervals ranging from 810-11,692 km) was the spatial scale at which evolutionarily meaningful barriers to gene flow start to occur at sea, although substantially shorter distances are also possible for some taxa. In general, however, such a large estimate of connectivity has important implications for the evolutionary and conservation potential of many marine fish communities.

  10. The conservation value of South East Asia's highly degraded forests: evidence from leaf-litter ants

    PubMed Central

    Woodcock, Paul; Edwards, David P.; Fayle, Tom M.; Newton, Rob J.; Khen, Chey Vun; Bottrell, Simon H.; Hamer, Keith C.

    2011-01-01

    South East Asia is widely regarded as a centre of threatened biodiversity owing to extensive logging and forest conversion to agriculture. In particular, forests degraded by repeated rounds of intensive logging are viewed as having little conservation value and are afforded meagre protection from conversion to oil palm. Here, we determine the biological value of such heavily degraded forests by comparing leaf-litter ant communities in unlogged (natural) and twice-logged forests in Sabah, Borneo. We accounted for impacts of logging on habitat heterogeneity by comparing species richness and composition at four nested spatial scales, and examining how species richness was partitioned across the landscape in each habitat. We found that twice-logged forest had fewer species occurrences, lower species richness at small spatial scales and altered species composition compared with natural forests. However, over 80 per cent of species found in unlogged forest were detected within twice-logged forest. Moreover, greater species turnover among sites in twice-logged forest resulted in identical species richness between habitats at the largest spatial scale. While two intensive logging cycles have negative impacts on ant communities, these degraded forests clearly provide important habitat for numerous species and preventing their conversion to oil palm and other crops should be a conservation priority. PMID:22006966

  11. Remote sensing of exposure to NO2: Satellite versus ground-based measurement in a large urban area

    NASA Astrophysics Data System (ADS)

    Bechle, Matthew J.; Millet, Dylan B.; Marshall, Julian D.

    2013-04-01

    Remote sensing may be a useful tool for exploring spatial variability of air pollution exposure within an urban area. To evaluate the extent to which satellite data from the Ozone Monitoring Instrument (OMI) can resolve urban-scale gradients in ground-level nitrogen dioxide (NO2) within a large urban area, we compared estimates of surface NO2 concentrations derived from OMI measurements and US EPA ambient monitoring stations. OMI, aboard NASA's Aura satellite, provides daily afternoon (˜13:30 local time) measurements of NO2 tropospheric column abundance. We used scaling factors (surface-to-column ratios) to relate satellite column measurements to ground-level concentrations. We compared 4138 sets of paired data for 25 monitoring stations in the South Coast Air Basin of California for all of 2005. OMI measurements include more data gaps than the ground monitors (60% versus 5% of available data, respectively), owing to cloud contamination and imposed limits on pixel size. The spatial correlation between OMI columns and corrected in situ measurements is strong (r = 0.93 for annual average data), indicating that the within-urban spatial signature of surface NO2 is well resolved by the satellite sensor. Satellite-based surface estimates employing scaling factors from an urban model provide a reliable measure (annual mean bias: -13%; seasonal mean bias: <1% [spring] to -22% [fall]) of fine-scale surface NO2. We also find that OMI provides good spatial density in the study region (average area [km2] per measurement: 730 for the satellite sensor vs. 1100 for the monitors). Our findings indicate that satellite observations of NO2 from the OMI sensor provide a reliable measure of spatial variability in ground-level NO2 exposure for a large urban area.

  12. Understanding the relationship between vegetation phenology and productivity across key dryland ecosystem types through the integration of PhenoCam, satellite, and eddy covariance data

    NASA Astrophysics Data System (ADS)

    Yan, D.; Scott, R. L.; Moore, D. J.; Biederman, J. A.; Smith, W. K.

    2017-12-01

    Land surface phenology (LSP) - defined as remotely sensed seasonal variations in vegetation greenness - is intrinsically linked to seasonal carbon uptake, and is thus commonly used as a proxy for vegetation productivity (gross primary productivity; GPP). Yet, the relationship between LSP and GPP remains uncertain, particularly for understudied dryland ecosystems characterized by relatively large spatial and temporal variability. Here, we explored the relationship between LSP and the phenology of GPP for three dominant dryland ecosystem types, and we evaluated how these relationships change as a function of spatial and temporal scale. We focused on three long-term dryland eddy covariance flux tower sites: Walnut Gulch Lucky Hills Shrubland (WHS), Walnut Gulch Kendall Grassland (WKG), and Santa Rita Mesquite (SRM). We analyzed daily canopy-level, 16-day 30m, and 8-day 500m time series of greenness indices from PhenoCam, Landsat 7 ETM+/Landsat 8 OLI, and MODIS, respectively. We first quantified the impact of spatial scale by temporally resampling canopy-level PhenoCam, 30m Landsat, and 500m MODIS to 16-day intervals and then comparing against flux tower GPP estimates. We next quantified the impact of temporal scale by spatially resampling daily PhenoCam, 16-day Landsat, and 8-day MODIS to 500m time series and then comparing against flux tower GPP estimates. We find evidence of critical periods of decoupling between LSP and the phenology of GPP that vary according to the spatial and temporal scale, and as a function of ecosystem type. Our results provide key insight into dryland LSP and GPP dynamics that can be used in future efforts to improve ecosystem process models and satellite-based vegetation productivity algorithms.

  13. Hierarchical population monitoring of greater sage-grouse (Centrocercus urophasianus) in Nevada and California—Identifying populations for management at the appropriate spatial scale

    USGS Publications Warehouse

    Coates, Peter S.; Prochazka, Brian G.; Ricca, Mark A.; Wann, Gregory T.; Aldridge, Cameron L.; Hanser, Steven E.; Doherty, Kevin E.; O'Donnell, Michael S.; Edmunds, David R.; Espinosa, Shawn P.

    2017-08-10

    Population ecologists have long recognized the importance of ecological scale in understanding processes that guide observed demographic patterns for wildlife species. However, directly incorporating spatial and temporal scale into monitoring strategies that detect whether trajectories are driven by local or regional factors is challenging and rarely implemented. Identifying the appropriate scale is critical to the development of management actions that can attenuate or reverse population declines. We describe a novel example of a monitoring framework for estimating annual rates of population change for greater sage-grouse (Centrocercus urophasianus) within a hierarchical and spatially nested structure. Specifically, we conducted Bayesian analyses on a 17-year dataset (2000–2016) of lek counts in Nevada and northeastern California to estimate annual rates of population change, and compared trends across nested spatial scales. We identified leks and larger scale populations in immediate need of management, based on the occurrence of two criteria: (1) crossing of a destabilizing threshold designed to identify significant rates of population decline at a particular nested scale; and (2) crossing of decoupling thresholds designed to identify rates of population decline at smaller scales that decouple from rates of population change at a larger spatial scale. This approach establishes how declines affected by local disturbances can be separated from those operating at larger scales (for example, broad-scale wildfire and region-wide drought). Given the threshold output from our analysis, this adaptive management framework can be implemented readily and annually to facilitate responsive and effective actions for sage-grouse populations in the Great Basin. The rules of the framework can also be modified to identify populations responding positively to management action or demonstrating strong resilience to disturbance. Similar hierarchical approaches might be beneficial for other species occupying landscapes with heterogeneous disturbance and climatic regimes.

  14. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Naughton, M.J.; Bourke, W.; Browning, G.L.

    The convergence of spectral model numerical solutions of the global shallow-water equations is examined as a function of the time step and the spectral truncation. The contributions to the errors due to the spatial and temporal discretizations are separately identified and compared. Numerical convergence experiments are performed with the inviscid equations from smooth (Rossby-Haurwitz wave) and observed (R45 atmospheric analysis) initial conditions, and also with the diffusive shallow-water equations. Results are compared with the forced inviscid shallow-water equations case studied by Browning et al. Reduction of the time discretization error by the removal of fast waves from the solution usingmore » initialization is shown. The effects of forcing and diffusion on the convergence are discussed. Time truncation errors are found to dominate when a feature is large scale and well resolved; spatial truncation errors dominate for small-scale features and also for large scale after the small scales have affected them. Possible implications of these results for global atmospheric modeling are discussed. 31 refs., 14 figs., 4 tabs.« less

  15. Spatially explicit modeling in ecology: A review

    USGS Publications Warehouse

    DeAngelis, Donald L.; Yurek, Simeon

    2017-01-01

    The use of spatially explicit models (SEMs) in ecology has grown enormously in the past two decades. One major advancement has been that fine-scale details of landscapes, and of spatially dependent biological processes, such as dispersal and invasion, can now be simulated with great precision, due to improvements in computer technology. Many areas of modeling have shifted toward a focus on capturing these fine-scale details, to improve mechanistic understanding of ecosystems. However, spatially implicit models (SIMs) have played a dominant role in ecology, and arguments have been made that SIMs, which account for the effects of space without specifying spatial positions, have an advantage of being simpler and more broadly applicable, perhaps contributing more to understanding. We address this debate by comparing SEMs and SIMs in examples from the past few decades of modeling research. We argue that, although SIMs have been the dominant approach in the incorporation of space in theoretical ecology, SEMs have unique advantages for addressing pragmatic questions concerning species populations or communities in specific places, because local conditions, such as spatial heterogeneities, organism behaviors, and other contingencies, produce dynamics and patterns that usually cannot be incorporated into simpler SIMs. SEMs are also able to describe mechanisms at the local scale that can create amplifying positive feedbacks at that scale, creating emergent patterns at larger scales, and therefore are important to basic ecological theory. We review the use of SEMs at the level of populations, interacting populations, food webs, and ecosystems and argue that SEMs are not only essential in pragmatic issues, but must play a role in the understanding of causal relationships on landscapes.

  16. Consistency of Aquarius version-4 sea surface salinity with Argo products on various spatial and temporal scales

    NASA Astrophysics Data System (ADS)

    Lee, T.

    2016-12-01

    Understanding the accuracies of satellite-derived sea surface salinity (SSS) measurements in depicting temporal changes and the dependence of the accuracies on spatio-temporal scales are important to applications, capability assessment, and future mission design. This study quantifies the consistency between Aquarius Version-4 monthly gridded SSS (released in October 2015) with two widely used Argo monthly gridded near-surface salinity products. The analysis focused on their consistency in depicting temporal changes (including seasonal and non-seasonal) on various spatial scales: 1°x1°, 3°x3°, and 10°x10°. Globally averaged standard deviation (STD) values for Aquarius-Argo salinity differences on these three spatial scales are 0.16, 0.14, 0.09 psu, compared to those between the two Argo products of 0.10, 0.09, and 0.04 psu. Aquarius SSS compare better with Argo data on non-seasonal (e.g., interannual and intraseasonal) than for seasonal time scales. The seasonal Aquarius-Argo SSS differences are mostly concentrated at high latitudes. The Aquarius team is making active efforts to further reduce these high-latitude seasonal biases. The consistency between Aquarius and Argo salinity is similar to that between the two Argo products in the tropics and subtropics for non-seasonal signals, and in the tropics for seasonal signals. Therefore, the representativeness errors of the Argo products for various spatial scales (related to sampling and gridding) need to be taken into account when estimating the uncertainty of Aquarius SSS. The globally averaged uncertainty of large-scale (10°x10°) non-seasonal Aquarius SSS is approximately 0.04 psu. These estimates reflect the significant improvements of Aquarius Version-4 SSS over the previous versions. The estimates can be used as baseline requirements for future ocean salinity missions from space.

  17. Forecasting Influenza Outbreaks in Boroughs and Neighborhoods of New York City.

    PubMed

    Yang, Wan; Olson, Donald R; Shaman, Jeffrey

    2016-11-01

    The ideal spatial scale, or granularity, at which infectious disease incidence should be monitored and forecast has been little explored. By identifying the optimal granularity for a given disease and host population, and matching surveillance and prediction efforts to this scale, response to emergent and recurrent outbreaks can be improved. Here we explore how granularity and representation of spatial structure affect influenza forecast accuracy within New York City. We develop network models at the borough and neighborhood levels, and use them in conjunction with surveillance data and a data assimilation method to forecast influenza activity. These forecasts are compared to an alternate system that predicts influenza for each borough or neighborhood in isolation. At the borough scale, influenza epidemics are highly synchronous despite substantial differences in intensity, and inclusion of network connectivity among boroughs generally improves forecast accuracy. At the neighborhood scale, we observe much greater spatial heterogeneity among influenza outbreaks including substantial differences in local outbreak timing and structure; however, inclusion of the network model structure generally degrades forecast accuracy. One notable exception is that local outbreak onset, particularly when signal is modest, is better predicted with the network model. These findings suggest that observation and forecast at sub-municipal scales within New York City provides richer, more discriminant information on influenza incidence, particularly at the neighborhood scale where greater heterogeneity exists, and that the spatial spread of influenza among localities can be forecast.

  18. Modeling Soil Carbon Dynamics in Northern Forests: Effects of Spatial and Temporal Aggregation of Climatic Input Data.

    PubMed

    Dalsgaard, Lise; Astrup, Rasmus; Antón-Fernández, Clara; Borgen, Signe Kynding; Breidenbach, Johannes; Lange, Holger; Lehtonen, Aleksi; Liski, Jari

    2016-01-01

    Boreal forests contain 30% of the global forest carbon with the majority residing in soils. While challenging to quantify, soil carbon changes comprise a significant, and potentially increasing, part of the terrestrial carbon cycle. Thus, their estimation is important when designing forest-based climate change mitigation strategies and soil carbon change estimates are required for the reporting of greenhouse gas emissions. Organic matter decomposition varies with climate in complex nonlinear ways, rendering data aggregation nontrivial. Here, we explored the effects of temporal and spatial aggregation of climatic and litter input data on regional estimates of soil organic carbon stocks and changes for upland forests. We used the soil carbon and decomposition model Yasso07 with input from the Norwegian National Forest Inventory (11275 plots, 1960-2012). Estimates were produced at three spatial and three temporal scales. Results showed that a national level average soil carbon stock estimate varied by 10% depending on the applied spatial and temporal scale of aggregation. Higher stocks were found when applying plot-level input compared to country-level input and when long-term climate was used as compared to annual or 5-year mean values. A national level estimate for soil carbon change was similar across spatial scales, but was considerably (60-70%) lower when applying annual or 5-year mean climate compared to long-term mean climate reflecting the recent climatic changes in Norway. This was particularly evident for the forest-dominated districts in the southeastern and central parts of Norway and in the far north. We concluded that the sensitivity of model estimates to spatial aggregation will depend on the region of interest. Further, that using long-term climate averages during periods with strong climatic trends results in large differences in soil carbon estimates. The largest differences in this study were observed in central and northern regions with strongly increasing temperatures.

  19. Modeling Soil Carbon Dynamics in Northern Forests: Effects of Spatial and Temporal Aggregation of Climatic Input Data

    PubMed Central

    Dalsgaard, Lise; Astrup, Rasmus; Antón-Fernández, Clara; Borgen, Signe Kynding; Breidenbach, Johannes; Lange, Holger; Lehtonen, Aleksi; Liski, Jari

    2016-01-01

    Boreal forests contain 30% of the global forest carbon with the majority residing in soils. While challenging to quantify, soil carbon changes comprise a significant, and potentially increasing, part of the terrestrial carbon cycle. Thus, their estimation is important when designing forest-based climate change mitigation strategies and soil carbon change estimates are required for the reporting of greenhouse gas emissions. Organic matter decomposition varies with climate in complex nonlinear ways, rendering data aggregation nontrivial. Here, we explored the effects of temporal and spatial aggregation of climatic and litter input data on regional estimates of soil organic carbon stocks and changes for upland forests. We used the soil carbon and decomposition model Yasso07 with input from the Norwegian National Forest Inventory (11275 plots, 1960–2012). Estimates were produced at three spatial and three temporal scales. Results showed that a national level average soil carbon stock estimate varied by 10% depending on the applied spatial and temporal scale of aggregation. Higher stocks were found when applying plot-level input compared to country-level input and when long-term climate was used as compared to annual or 5-year mean values. A national level estimate for soil carbon change was similar across spatial scales, but was considerably (60–70%) lower when applying annual or 5-year mean climate compared to long-term mean climate reflecting the recent climatic changes in Norway. This was particularly evident for the forest-dominated districts in the southeastern and central parts of Norway and in the far north. We concluded that the sensitivity of model estimates to spatial aggregation will depend on the region of interest. Further, that using long-term climate averages during periods with strong climatic trends results in large differences in soil carbon estimates. The largest differences in this study were observed in central and northern regions with strongly increasing temperatures. PMID:26901763

  20. COMPARING ECOLOGICALLY SCALED LANDSCAPE INDICES WITH A SPATIALLY EXPLICIT POPULATION MODEL

    EPA Science Inventory

    Vos et al. (2001) proposed a class of landscape indices they called ecologically scaled. By this they meant that the indices incorporate species-specific characteristics that are assumed to be important for population viability. I used their two ideas of species carrying capaci...

  1. Habitat models to predict wetland bird occupancy influenced by scale, anthropogenic disturbance, and imperfect detection

    USGS Publications Warehouse

    Glisson, Wesley J.; Conway, Courtney J.; Nadeau, Christopher P.; Borgmann, Kathi L.

    2017-01-01

    Understanding species–habitat relationships for endangered species is critical for their conservation. However, many studies have limited value for conservation because they fail to account for habitat associations at multiple spatial scales, anthropogenic variables, and imperfect detection. We addressed these three limitations by developing models for an endangered wetland bird, Yuma Ridgway's rail (Rallus obsoletus yumanensis), that examined how the spatial scale of environmental variables, inclusion of anthropogenic disturbance variables, and accounting for imperfect detection in validation data influenced model performance. These models identified associations between environmental variables and occupancy. We used bird survey and spatial environmental data at 2473 locations throughout the species' U.S. range to create and validate occupancy models and produce predictive maps of occupancy. We compared habitat-based models at three spatial scales (100, 224, and 500 m radii buffers) with and without anthropogenic disturbance variables using validation data adjusted for imperfect detection and an unadjusted validation dataset that ignored imperfect detection. The inclusion of anthropogenic disturbance variables improved the performance of habitat models at all three spatial scales, and the 224-m-scale model performed best. All models exhibited greater predictive ability when imperfect detection was incorporated into validation data. Yuma Ridgway's rail occupancy was negatively associated with ephemeral and slow-moving riverine features and high-intensity anthropogenic development, and positively associated with emergent vegetation, agriculture, and low-intensity development. Our modeling approach accounts for common limitations in modeling species–habitat relationships and creating predictive maps of occupancy probability and, therefore, provides a useful framework for other species.

  2. Counting Magnetic Bipoles on the Sun by Polarity Inversion

    NASA Technical Reports Server (NTRS)

    Jones, Harrison P.

    2004-01-01

    This paper presents a simple and efficient algorithm for deriving images of polarity inversion from NSO/Kitt Peak magnetograms without use of contouring routines and shows by example how these maps depend upon the spatial scale for filtering the raw data. Smaller filtering scales produce many localized closed contours in mixed polarity regions while supergranular and larger filtering scales produce more global patterns. The apparent continuity of an inversion line depends on how the spatial filtering is accomplished, but its shape depends only on scale. The total length of the magnetic polarity inversion contours varies as a power law of the filter scale with fractal dimension of order 1.9. The amplitude but nut the exponent of this power-law relation varies with solar activity. The results are compared to similar analyses of areal distributions of bipolar magnetic regions.

  3. Modifying a dynamic global vegetation model for simulating large spatial scale land surface water balance

    NASA Astrophysics Data System (ADS)

    Tang, G.; Bartlein, P. J.

    2012-01-01

    Water balance models of simple structure are easier to grasp and more clearly connect cause and effect than models of complex structure. Such models are essential for studying large spatial scale land surface water balance in the context of climate and land cover change, both natural and anthropogenic. This study aims to (i) develop a large spatial scale water balance model by modifying a dynamic global vegetation model (DGVM), and (ii) test the model's performance in simulating actual evapotranspiration (ET), soil moisture and surface runoff for the coterminous United States (US). Toward these ends, we first introduced development of the "LPJ-Hydrology" (LH) model by incorporating satellite-based land covers into the Lund-Potsdam-Jena (LPJ) DGVM instead of dynamically simulating them. We then ran LH using historical (1982-2006) climate data and satellite-based land covers at 2.5 arc-min grid cells. The simulated ET, soil moisture and surface runoff were compared to existing sets of observed or simulated data for the US. The results indicated that LH captures well the variation of monthly actual ET (R2 = 0.61, p < 0.01) in the Everglades of Florida over the years 1996-2001. The modeled monthly soil moisture for Illinois of the US agrees well (R2 = 0.79, p < 0.01) with the observed over the years 1984-2001. The modeled monthly stream flow for most 12 major rivers in the US is consistent R2 > 0.46, p < 0.01; Nash-Sutcliffe Coefficients >0.52) with observed values over the years 1982-2006, respectively. The modeled spatial patterns of annual ET and surface runoff are in accordance with previously published data. Compared to its predecessor, LH simulates better monthly stream flow in winter and early spring by incorporating effects of solar radiation on snowmelt. Overall, this study proves the feasibility of incorporating satellite-based land-covers into a DGVM for simulating large spatial scale land surface water balance. LH developed in this study should be a useful tool for studying effects of climate and land cover change on land surface hydrology at large spatial scales.

  4. Temporal change in forest fragmentation at multiple scales

    Treesearch

    J.D. Wickham; K.H. Riitters; T.G. Wade; J.W. Coulston

    2007-01-01

    Previous studies of temporal changes in fragmentation have focused almost exclusively on patch and edge statistics, which might not detect changes in the spatial scale at which forest occurs in or dominates the landscape. We used temporal land-cover data for the Chesapeake Bay region and the state of New Jersey to compare patch-based and area–density scaling measures...

  5. On the spatial distribution of small heavy particles in homogeneous shear turbulence

    NASA Astrophysics Data System (ADS)

    Nicolai, C.; Jacob, B.; Piva, R.

    2013-08-01

    We report on a novel experiment aimed at investigating the effects induced by a large-scale velocity gradient on the turbulent transport of small heavy particles. To this purpose, a homogeneous shear flow at Reλ = 540 and shear parameter S* = 4.5 is set-up and laden with glass spheres whose size d is comparable with the Kolmogorov lengthscale η of the flow (d/η ≈ 1). The particle Stokes number is approximately 0.3. The analysis of the instantaneous particle fields by means of Voronoï diagrams confirms the occurrence of intense turbulent clustering at small scales, as observed in homogeneous isotropic flows. It also indicates that the anisotropy of the velocity fluctuations induces a preferential orientation of the particle clusters. In order to characterize the fine-scale features of the dispersed phase, spatial correlations of the particle field are employed in conjunction with statistical tools recently developed for anisotropic turbulence. The scale-by-scale analysis of the particle field clarifies that isotropy of the particle distribution is tendentially recovered at small separations, even though the signatures of the mean shear persist down to smaller scales as compared to the fluid velocity field.

  6. Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

    DOE PAGES

    Liang, Yuting; Wu, Liyou; Clark, Ian M.; ...

    2015-04-07

    Spatial scaling is a critical issue in ecology, but how anthropogenic activities like fertilization affect spatial scaling is poorly understood, especially for microbial communities. Here, we determined the effects of long-term fertilization on the spatial scaling of microbial functional diversity and its relationships to plant diversity in the 150-year-old Park Grass Experiment, the oldest continuous grassland experiment in the world. Nested samples were taken from plots with contrasting inorganic fertilization regimes, and community DNAs were analyzed using the GeoChip-based functional gene array. The slopes of microbial gene-area relationships (GARs) and plant species-area relationships (SARs) were estimated in a plot receivingmore » nitrogen (N), phosphorus (P), and potassium (K) and a control plot without fertilization. Our results indicated that long-term inorganic fertilization significantly increased both microbial GARs and plant SARs. Microbial spatial turnover rates (i.e., z values) were less than 0.1 and were significantly higher in the fertilized plot (0.0583) than in the control plot (0.0449) (P < 0.0001). The z values also varied significantly with different functional genes involved in carbon (C), N, P, and sulfur (S) cycling and with various phylogenetic groups (archaea, bacteria, and fungi). Similarly, the plant SARs increased significantly (P < 0.0001), from 0.225 in the control plot to 0.419 in the fertilized plot. Soil fertilization, plant diversity, and spatial distance had roughly equal contributions in shaping the microbial functional community structure, while soil geochemical variables contributed less. These results indicated that long-term agricultural practice could alter the spatial scaling of microbial biodiversity. Determining the spatial scaling of microbial biodiversity and its response to human activities is important but challenging in microbial ecology. Most studies to date are based on different sites that may not be truly comparable or on short-term perturbations, and hence, the results observed could represent transient responses. This study examined the spatial patterns of microbial communities in response to different fertilization regimes at the Rothamsted Research Experimental Station, which has become an invaluable resource for ecologists, environmentalists, and soil scientists. The current study is the first showing that long-term fertilization has dramatic impacts on the spatial scaling of microbial communities. By identifying the spatial patterns in response to long-term fertilization and their underlying mechanisms, this study makes fundamental contributions to predictive understanding of microbial biogeography.« less

  7. Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liang, Yuting; Wu, Liyou; Clark, Ian M.

    Spatial scaling is a critical issue in ecology, but how anthropogenic activities like fertilization affect spatial scaling is poorly understood, especially for microbial communities. Here, we determined the effects of long-term fertilization on the spatial scaling of microbial functional diversity and its relationships to plant diversity in the 150-year-old Park Grass Experiment, the oldest continuous grassland experiment in the world. Nested samples were taken from plots with contrasting inorganic fertilization regimes, and community DNAs were analyzed using the GeoChip-based functional gene array. The slopes of microbial gene-area relationships (GARs) and plant species-area relationships (SARs) were estimated in a plot receivingmore » nitrogen (N), phosphorus (P), and potassium (K) and a control plot without fertilization. Our results indicated that long-term inorganic fertilization significantly increased both microbial GARs and plant SARs. Microbial spatial turnover rates (i.e., z values) were less than 0.1 and were significantly higher in the fertilized plot (0.0583) than in the control plot (0.0449) (P < 0.0001). The z values also varied significantly with different functional genes involved in carbon (C), N, P, and sulfur (S) cycling and with various phylogenetic groups (archaea, bacteria, and fungi). Similarly, the plant SARs increased significantly (P < 0.0001), from 0.225 in the control plot to 0.419 in the fertilized plot. Soil fertilization, plant diversity, and spatial distance had roughly equal contributions in shaping the microbial functional community structure, while soil geochemical variables contributed less. These results indicated that long-term agricultural practice could alter the spatial scaling of microbial biodiversity. Determining the spatial scaling of microbial biodiversity and its response to human activities is important but challenging in microbial ecology. Most studies to date are based on different sites that may not be truly comparable or on short-term perturbations, and hence, the results observed could represent transient responses. This study examined the spatial patterns of microbial communities in response to different fertilization regimes at the Rothamsted Research Experimental Station, which has become an invaluable resource for ecologists, environmentalists, and soil scientists. The current study is the first showing that long-term fertilization has dramatic impacts on the spatial scaling of microbial communities. By identifying the spatial patterns in response to long-term fertilization and their underlying mechanisms, this study makes fundamental contributions to predictive understanding of microbial biogeography.« less

  8. Mercury and methylmercury stream concentrations in a Coastal Plain watershed: A multi-scale simulation analysis

    USGS Publications Warehouse

    Knightes, Christopher D.; Golden, Heather E.; Journey, Celeste A.; Davis, Gary M.; Conrads, Paul; Marvin-DiPasquale, Mark; Brigham, Mark E.; Bradley, Paul M.

    2014-01-01

    Mercury is a ubiquitous global environmental toxicant responsible for most US fish advisories. Processes governing mercury concentrations in rivers and streams are not well understood, particularly at multiple spatial scales. We investigate how insights gained from reach-scale mercury data and model simulations can be applied at broader watershed scales using a spatially and temporally explicit watershed hydrology and biogeochemical cycling model, VELMA. We simulate fate and transport using reach-scale (0.1 km2) study data and evaluate applications to multiple watershed scales. Reach-scale VELMA parameterization was applied to two nested sub-watersheds (28 km2 and 25 km2) and the encompassing watershed (79 km2). Results demonstrate that simulated flow and total mercury concentrations compare reasonably to observations at different scales, but simulated methylmercury concentrations are out-of-phase with observations. These findings suggest that intricacies of methylmercury biogeochemical cycling and transport are under-represented in VELMA and underscore the complexity of simulating mercury fate and transport.

  9. Assessing the Spatial Scale Effect of Anthropogenic Factors on Species Distribution

    PubMed Central

    Mangiacotti, Marco; Scali, Stefano; Sacchi, Roberto; Bassu, Lara; Nulchis, Valeria; Corti, Claudia

    2013-01-01

    Patch context is a way to describe the effect that the surroundings exert on a landscape patch. Despite anthropogenic context alteration may affect species distributions by reducing the accessibility to suitable patches, species distribution modelling have rarely accounted for its effects explicitly. We propose a general framework to statistically detect the occurrence and the extent of such a factor, by combining presence-only data, spatial distribution models and information-theoretic model selection procedures. After having established the spatial resolution of the analysis on the basis of the species characteristics, a measure of anthropogenic alteration that can be quantified at increasing distance from each patch has to be defined. Then the distribution of the species is modelled under competing hypotheses: H0, assumes that the distribution is uninfluenced by the anthropogenic variables; H1, assumes the effect of alteration at the species scale (resolution); and H2, H3 … Hn add the effect of context alteration at increasing radii. Models are compared using the Akaike Information Criterion to establish the best hypothesis, and consequently the occurrence (if any) and the spatial scale of the anthropogenic effect. As a study case we analysed the distribution data of two insular lizards (one endemic and one naturalised) using four alternative hypotheses: no alteration (H0), alteration at the species scale (H1), alteration at two context scales (H2 and H3). H2 and H3 performed better than H0 and H1, highlighting the importance of context alteration. H2 performed better than H3, setting the spatial scale of the context at 1 km. The two species respond differently to context alteration, the introduced lizard being more tolerant than the endemic one. The proposed approach supplies reliably and interpretable results, uses easily available data on species distribution, and allows the assessing of the spatial scale at which human disturbance produces the heaviest effects. PMID:23825669

  10. Distribution patterns of the crab Ucides cordatus (Brachyura, Ucididae) at different spatial scales in subtropical mangroves of Paranaguá Bay (southern Brazil)

    NASA Astrophysics Data System (ADS)

    Sandrini-Neto, L.; Lana, P. C.

    2012-06-01

    Heterogeneity in the distribution of organisms occurs at a range of spatial scales, which may vary from few centimeters to hundreds of kilometers. The exclusion of small-scale variability from routine sampling designs may confound comparisons at larger scales and lead to inconsistent interpretation of data. Despite its ecological and social-economic importance, little is known about the spatial structure of the mangrove crab Ucides cordatus in the southwest Atlantic. Previous studies have commonly compared densities at relatively broad scales, relying on alleged distribution patterns (e.g., mangroves of distinct composition and structure). We have assessed variability patterns of U. cordatus in mangroves of Paranaguá Bay at four levels of spatial hierarchy (10 s km, km, 10 s m and m) using a nested ANOVA and variance components measures. The potential role of sediment parameters, pneumatophore density, and organic matter content in regulating observed patterns was assessed by multiple regression models. Densities of total and non-commercial size crabs varied mostly at 10 s m to km scales. Densities of commercial size crabs differed at the scales of 10 s m and 10 s km. Variance components indicated that small-scale variation was the most important, contributing up to 70% of the crab density variability. Multiple regression models could not explain the observed variations. Processes driving differences in crab abundance were not related to the measured variables. Small-scale patchy distribution has direct implications to current management practices of U. cordatus. Future studies should consider processes operating at smaller scales, which are responsible for a complex mosaic of patches within previously described patterns.

  11. Challenges to Progress in Studies of Climate-Tectonic-Erosion Interactions

    NASA Astrophysics Data System (ADS)

    Burbank, D. W.

    2016-12-01

    Attempts to unravel the relative importance of climate and tectonics in modulating topography and erosion should compare relevant data sets at comparable temporal and spatial scales. Given that such data are uncommonly available, how can we compare diverse data sets in a robust fashion? Many erosion-rate studies rely on detrital cosmogenic nuclides. What time scales can such data address, and what landscape conditions do they require to provide accurate representations of long-term erosion rates? To what extent do large-scale, but infrequent erosional events impact long-term rates? Commonly, long-term erosion rates are deduced from thermochronologic data. What types of data are needed to test for consistency of rates across a given interval or change in rates through time? Similarly, spatial and temporal variability in precipitation or tectonics requires averaging across appropriate scales. How are such data obtained in deforming mountain belts, and how do we assess their reliability? This study describes the character and temporal duration of key variables that are needed to examine climate-tectonic-erosion interactions, explores the strengths and weaknesses of several study areas, and suggests the types of data requirements that will underpin enlightening "tests" of hypotheses related to the mutual impacts of climate, tectonics, and erosion.

  12. L-band Soil Moisture Mapping using Small UnManned Aerial Systems

    NASA Astrophysics Data System (ADS)

    Dai, E.; Gasiewski, A. J.; Stachura, M.; Elston, J.; Venkitasubramony, A.

    2016-12-01

    1. IntroductionSoil moisture is of fundamental importance to many hydrological, biological and biogeochemical processes, plays an important role in the development and evolution of convective weather and precipitation, and impacts water resource management, agriculture, and flood runoff prediction. The launch of NASA's Soil Moisture Active/Passive (SMAP) mission in 2015 promises to provide global measurements of soil moisture and surface freeze/thaw state at fixed crossing times and spatial resolutions as low as 5 km for some products. However, there exists a need for measurements of soil moisture on smaller spatial scales and arbitrary diurnal times for SMAP validation, precision agriculture and evaporation and transpiration studies of boundary layer heat transport. The Lobe Differencing Correlation Radiometer (LDCR) provides a means of mapping soil moisture on spatial scales as small as several meters (i.e., the height of the platform). Compared with various other proposed methods of validation based on either in-situ measurements [1,2] or existing airborne sensors suitable for manned aircraft deployment [3], the integrated design of the LDCR on a lightweight small UAS (sUAS) is capable of providing sub-watershed ( km scale) coverage at very high spatial resolution ( 15 m) suitable for scaling scale studies, and at comparatively low operator cost. To demonstrate the LDCR several flights had been performed during field experiments at the Canton Oklahoma Soilscape site on September 8th and 9th, 2015 and Yuma Colorado Irrigation Research Foundation (IRF) site from June to August, 2016. These tests were flown at 25-50 m altitude to obtain differing spatial resolutions. The scientific intercomparisons of LDCR retrieved soil moisture and in-situ measurements will be presented. 2. References[1] McIntyre, E.M., A.J. Gasiewski, and D. Manda D, "Near Real-Time Passive C-Band Microwave Soil Moisture Retrieval During CLASIC 2007," Proc. IGARSS, 2008. [2] Robock, A., S. Steele-Dunne, J. Basara, W. Crow, and M. Moghaddam M, "In Situ Network and Scaling," SMAP Algorithm and Cal/Val Workshop, 2009. [3] Walker, A., "Airborne Microwave Radiometer Measurements During CanEx-SM10," Second SMAP Cal/Val Workshop, 2011.

  13. Spatial variability of the Black Sea surface temperature from high resolution modeling and satellite measurements

    NASA Astrophysics Data System (ADS)

    Mizyuk, Artem; Senderov, Maxim; Korotaev, Gennady

    2016-04-01

    Large number of numerical ocean models were implemented for the Black Sea basin during last two decades. They reproduce rather similar structure of synoptical variability of the circulation. Since 00-s numerical studies of the mesoscale structure are carried out using high performance computing (HPC). With the growing capacity of computing resources it is now possible to reconstruct the Black Sea currents with spatial resolution of several hundreds meters. However, how realistic these results can be? In the proposed study an attempt is made to understand which spatial scales are reproduced by ocean model in the Black Sea. Simulations are made using parallel version of NEMO (Nucleus for European Modelling of the Ocean). A two regional configurations with spatial resolutions 5 km and 2.5 km are described. Comparison of the SST from simulations with two spatial resolutions shows rather qualitative difference of the spatial structures. Results of high resolution simulation are compared also with satellite observations and observation-based products from Copernicus using spatial correlation and spectral analysis. Spatial scales of correlations functions for simulated and observed SST are rather close and differs much from satellite SST reanalysis. Evolution of spectral density for modelled SST and reanalysis showed agreed time periods of small scales intensification. Using of the spectral analysis for satellite measurements is complicated due to gaps. The research leading to this results has received funding from Russian Science Foundation (project № 15-17-20020)

  14. Spatial heterogeneity of leaf area index across scales from simulation and remote sensing

    NASA Astrophysics Data System (ADS)

    Reichenau, Tim G.; Korres, Wolfgang; Montzka, Carsten; Schneider, Karl

    2016-04-01

    Leaf area index (LAI, single sided leaf area per ground area) influences mass and energy exchange of vegetated surfaces. Therefore LAI is an input variable for many land surface schemes of coupled large scale models, which do not simulate LAI. Since these models typically run on rather coarse resolution grids, LAI is often inferred from coarse resolution remote sensing. However, especially in agriculturally used areas, a grid cell of these products often covers more than a single land-use. In that case, the given LAI does not apply to any single land-use. Therefore, the overall spatial heterogeneity in these datasets differs from that on resolutions high enough to distinguish areas with differing land-use. Detailed process-based plant growth models simulate LAI for separate plant functional types or specific species. However, limited availability of observations causes reduced spatial heterogeneity of model input data (soil, weather, land-use). Since LAI is strongly heterogeneous in space and time and since processes depend on LAI in a nonlinear way, a correct representation of LAI spatial heterogeneity is also desirable on coarse resolutions. The current study assesses this issue by comparing the spatial heterogeneity of LAI from remote sensing (RapidEye) and process-based simulations (DANUBIA simulation system) across scales. Spatial heterogeneity is assessed by analyzing LAI frequency distributions (spatial variability) and semivariograms (spatial structure). Test case is the arable land in the fertile loess plain of the Rur catchment near the Germany-Netherlands border.

  15. The Use of Coarse Resolution Satellite Imagery to Predict Human Puumala Virus Epidemics in Sweden.

    DTIC Science & Technology

    1992-09-11

    the adverse effects on NDVI data quality can occur in both the spatial and temporal dimension. In other words, a specific pixel value recorded in...are compared to the land-oriented systems.22 On the other hand, the very course spatial resolution has the advantage of greatly reducing the volume...necessary on the scale of individual fields, in which case LANDSAT-TM has higher spatial resolution ; and secondly, when specific

  16. The impact of mating systems and dispersal on fine-scale genetic structure at maternally, paternally and biparentally inherited markers.

    PubMed

    Shaw, Robyn E; Banks, Sam C; Peakall, Rod

    2018-01-01

    For decades, studies have focused on how dispersal and mating systems influence genetic structure across populations or social groups. However, we still lack a thorough understanding of how these processes and their interaction shape spatial genetic patterns over a finer scale (tens-hundreds of metres). Using uniparentally inherited markers may help answer these questions, yet their potential has not been fully explored. Here, we use individual-level simulations to investigate the effects of dispersal and mating system on fine-scale genetic structure at autosomal, mitochondrial and Y chromosome markers. Using genetic spatial autocorrelation analysis, we found that dispersal was the major driver of fine-scale genetic structure across maternally, paternally and biparentally inherited markers. However, when dispersal was restricted (mean distance = 100 m), variation in mating behaviour created strong differences in the comparative level of structure detected at maternally and paternally inherited markers. Promiscuity reduced spatial genetic structure at Y chromosome loci (relative to monogamy), whereas structure increased under polygyny. In contrast, mitochondrial and autosomal markers were robust to differences in the specific mating system, although genetic structure increased across all markers when reproductive success was skewed towards fewer individuals. Comparing males and females at Y chromosome vs. mitochondrial markers, respectively, revealed that some mating systems can generate similar patterns to those expected under sex-biased dispersal. This demonstrates the need for caution when inferring ecological and behavioural processes from genetic results. Comparing patterns between the sexes, across a range of marker types, may help us tease apart the processes shaping fine-scale genetic structure. © 2017 John Wiley & Sons Ltd.

  17. Soil nutrients influence spatial distributions of tropical tree species.

    PubMed

    John, Robert; Dalling, James W; Harms, Kyle E; Yavitt, Joseph B; Stallard, Robert F; Mirabello, Matthew; Hubbell, Stephen P; Valencia, Renato; Navarrete, Hugo; Vallejo, Martha; Foster, Robin B

    2007-01-16

    The importance of niche vs. neutral assembly mechanisms in structuring tropical tree communities remains an important unsettled question in community ecology [Bell G (2005) Ecology 86:1757-1770]. There is ample evidence that species distributions are determined by soils and habitat factors at landscape (<10(4) km(2)) and regional scales. At local scales (<1 km(2)), however, habitat factors and species distributions show comparable spatial aggregation, making it difficult to disentangle the importance of niche and dispersal processes. In this article, we test soil resource-based niche assembly at a local scale, using species and soil nutrient distributions obtained at high spatial resolution in three diverse neotropical forest plots in Colombia (La Planada), Ecuador (Yasuni), and Panama (Barro Colorado Island). Using spatial distribution maps of >0.5 million individual trees of 1,400 species and 10 essential plant nutrients, we used Monte Carlo simulations of species distributions to test plant-soil associations against null expectations based on dispersal assembly. We found that the spatial distributions of 36-51% of tree species at these sites show strong associations to soil nutrient distributions. Neutral dispersal assembly cannot account for these plant-soil associations or the observed niche breadths of these species. These results indicate that belowground resource availability plays an important role in the assembly of tropical tree communities at local scales and provide the basis for future investigations on the mechanisms of resource competition among tropical tree species.

  18. A Comparative Study of Spatial Aggregation Methodologies under the BioEarth Framework

    NASA Astrophysics Data System (ADS)

    Chandrasekharan, B.; Rajagopalan, K.; Malek, K.; Stockle, C. O.; Adam, J. C.; Brady, M.

    2014-12-01

    The increasing probability of water resource scarcity due to climate change has highlighted the need for adopting an economic focus in modelling water resource uses. Hydro-economic models, developed by integrating economic optimization with biophysical crop models, are driven by the economic value of water, revealing it's most efficient uses and helping policymakers evaluate different water management strategies. One of the challenges in integrating biophysical models with economic models is the difference in the spatial scales in which they operate. Biophysical models that provide crop production functions typically run at smaller scale than economic models, and substantial spatial aggregation is required. However, any aggregation introduces a bias, i.e., a discrepancy between the functional value at the higher spatial scale and the value at the spatial scale of the aggregated units. The objective of this work is to study the sensitivity of net economic benefits in the Yakima River basin (YRB) to different spatial aggregation methods for crop production functions. The spatial aggregation methodologies that we compare involve agro-ecological zones (AEZs) and aggregation levels that reflect water management regimes (e.g. irrigation districts). Aggregation bias can distort the underlying data and result in extreme solutions. In order to avoid this we use an economic optimization model that incorporates the synthetic and historical crop mixes approach (Onal & Chen, 2012). This restricts the solutions between the weighted averages of historical and simulated feasible planting decisions, with the weights associated with crop mixes being treated as endogenous variables. This study is focused on 5 major irrigation districts of the YRB in the Pacific Northwest US. The biophysical modeling framework we use, BioEarth, includes the coupled hydrology and crop growth model, VIC-Cropsyst and an economic optimization model. Preliminary findings indicate that the standard approach of developing AEZs does not perform well when overlaid with irrigation districts. Moreover, net economic benefits were significantly different between the two aggregation methodologies. Therefore, while developing hydro-economic models, significant consideration should be placed on the aggregation methodology.

  19. Predictions for an invaded world: A strategy to predict the distribution of native and non-indigenous species at multiple scales

    USGS Publications Warehouse

    Reusser, D.A.; Lee, H.

    2008-01-01

    Habitat models can be used to predict the distributions of marine and estuarine non-indigenous species (NIS) over several spatial scales. At an estuary scale, our goal is to predict the estuaries most likely to be invaded, but at a habitat scale, the goal is to predict the specific locations within an estuary that are most vulnerable to invasion. As an initial step in evaluating several habitat models, model performance for a suite of benthic species with reasonably well-known distributions on the Pacific coast of the US needs to be compared. We discuss the utility of non-parametric multiplicative regression (NPMR) for predicting habitat- and estuary-scale distributions of native and NIS. NPMR incorporates interactions among variables, allows qualitative and categorical variables, and utilizes data on absence as well as presence. Preliminary results indicate that NPMR generally performs well at both spatial scales and that distributions of NIS are predicted as well as those of native species. For most species, latitude was the single best predictor, although similar model performance could be obtained at both spatial scales with combinations of other habitat variables. Errors of commission were more frequent at a habitat scale, with omission and commission errors approximately equal at an estuary scale. ?? 2008 International Council for the Exploration of the Sea. Published by Oxford Journals. All rights reserved.

  20. Progress towards the use of publicly available data networks to conduct cross-scale historical reconstructions of carbon dynamics in US Drylands

    NASA Astrophysics Data System (ADS)

    Washington-Allen, R. A.; Landolt, K.; Emanuel, R. E.; Therrell, M. D.; Nagle, N.; Grissino-Mayer, H. D.; Poulter, B.

    2016-12-01

    Emergent scale properties of water-limited or Dryland ecosystem's carbon flux are unknown at spatial scales from local to global and time scales of 10 - 1000 years or greater. The width of a tree ring is a metric of production that has been correlated with the amount of precipitation. This relationship has been used to reconstruct rainfall and fire histories in the Drylands of the southwestern US. The normalized difference vegetation index (NDVI) is globally measured by selected satellite sensors and is highly correlated with the fraction of solar radiation which is absorbed for photosynthesis by plants (FPAR), as well as with vegetation biomass, net primary productivity (NPP), and tree ring width. Publicly available web-based archives of free NDVI and tree ring data exist and have allowed historical temporal reconstructions of carbon dynamics for the past 300 to 500 years. Climate and tree ring databases have been used to spatially reconstruct drought dynamics for the last 500 years in the western US. In 2007, we hypothesized that NDVI and tree ring width could be used to spatially reconstruct carbon dynamics in US Drylands. In 2015, we succeeded with a 300-year historical spatial reconstruction of NPP in California using a Blue Oak tree ring chronology. Online eddy covariance flux tower measures of NPP are well correlated with satellite measures of NPP. This suggests that net ecosystem exchange (NEE = NPP - soil Respiration) could be historically reconstructed across Drylands. Ongoing research includes 1) scaling historical spatial reconstruction to US Drylands, 2) comparing the use of single versus multiple tree ring species (r2 = 68) and 3) use of the eddy flux tower network, remote sensing, and tree ring data to historically spatially reconstruct Dryland NEE.

  1. Influence of Scale Effect and Model Performance in Downscaling ASTER Land Surface Temperatures to a Very High Spatial Resolution in an Agricultural Area

    NASA Astrophysics Data System (ADS)

    Zhou, J.; Li, G.; Liu, S.; Zhan, W.; Zhang, X.

    2015-12-01

    At present land surface temperatures (LSTs) can be generated from thermal infrared remote sensing with spatial resolutions from ~100 m to tens of kilometers. However, LSTs with high spatial resolution, e.g. tens of meters, are still lack. The purpose of LST downscaling is to generate LSTs with finer spatial resolutions than their native spatial resolutions. The statistical linear or nonlinear regression models are most frequently used for LST downscaling. The basic assumption of these models is the scale-invariant relationships between LST and its descriptors, which is questioned but rare researches have been reported. In addition, few researches can be found for downscaling satellite LST or TIR data to a high spatial resolution, i.e. better than 100 m or even finer. The lack of LST with high spatial resolution cannot satisfy the requirements of applications such as evapotranspiration mapping at the field scale. By selecting a dynamically developing agricultural oasis as the study area, the aim of this study is to downscale the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) LSTs to 15 m, to satisfy the requirement of evapotranspiration mapping at the field scale. Twelve ASTER images from May to September in 2012, covering the entire growth stage of maize, were selected. Four statistical models were evaluated, including one global model, one piecewise model, and two local models. The influence from scale effect in downscaling LST was quantified. The downscaled LSTs are evaluated from accuracy and image quality. Results demonstrate that the influence from scale effect varies according to models and the maize growth stage. Significant influence about -4 K to 6 K existed at the early stage and weaker influence existed in the middle stage. When compared with the ground measured LSTs, the downscaled LSTs resulted from the global and local models yielded higher accuracies and better image qualities than the local models. In addition to the vegetation indices, the surface albedo is an important descriptor for downscaling LST through explaining its spatial variation induced by soil moisture.

  2. Detecting small-scale spatial heterogeneity and temporal dynamics of soil organic carbon (SOC) stocks: a comparison between automatic chamber-derived C budgets and repeated soil inventories

    NASA Astrophysics Data System (ADS)

    Hoffmann, Mathias; Jurisch, Nicole; Garcia Alba, Juana; Albiac Borraz, Elisa; Schmidt, Marten; Huth, Vytas; Rogasik, Helmut; Rieckh, Helene; Verch, Gernot; Sommer, Michael; Augustin, Jürgen

    2017-03-01

    Carbon (C) sequestration in soils plays a key role in the global C cycle. It is therefore crucial to adequately monitor dynamics in soil organic carbon (ΔSOC) stocks when aiming to reveal underlying processes and potential drivers. However, small-scale spatial (10-30 m) and temporal changes in SOC stocks, particularly pronounced in arable lands, are hard to assess. The main reasons for this are limitations of the well-established methods. On the one hand, repeated soil inventories, often used in long-term field trials, reveal spatial patterns and trends in ΔSOC but require a longer observation period and a sufficient number of repetitions. On the other hand, eddy covariance measurements of C fluxes towards a complete C budget of the soil-plant-atmosphere system may help to obtain temporal ΔSOC patterns but lack small-scale spatial resolution. To overcome these limitations, this study presents a reliable method to detect both short-term temporal dynamics as well as small-scale spatial differences of ΔSOC using measurements of the net ecosystem carbon balance (NECB) as a proxy. To estimate the NECB, a combination of automatic chamber (AC) measurements of CO2 exchange and empirically modeled aboveground biomass development (NPPshoot) were used. To verify our method, results were compared with ΔSOC observed by soil resampling. Soil resampling and AC measurements were performed from 2010 to 2014 at a colluvial depression located in the hummocky ground moraine landscape of northeastern Germany. The measurement site is characterized by a variable groundwater level (GWL) and pronounced small-scale spatial heterogeneity regarding SOC and nitrogen (Nt) stocks. Tendencies and magnitude of ΔSOC values derived by AC measurements and repeated soil inventories corresponded well. The period of maximum plant growth was identified as being most important for the development of spatial differences in annual ΔSOC. Hence, we were able to confirm that AC-based C budgets are able to reveal small-scale spatial differences and short-term temporal dynamics of ΔSOC.

  3. Ecotoxicology and spatial modeling in population dynamics: an illustration with brown trout.

    PubMed

    Chaumot, Arnaud; Charles, Sandrine; Flammarion, Patrick; Auger, Pierre

    2003-05-01

    We developed a multiregion matrix population model to explore how the demography of a hypothetical brown trout population living in a river network varies in response to different spatial scenarios of cadmium contamination. Age structure, spatial distribution, and demographic and migration processes are taken into account in the model. Chronic or acute cadmium concentrations affect the demographic parameters at the scale of the river range. The outputs of the model constitute population-level end points (the asymptotic population growth rate, the stable age structure, and the asymptotic spatial distribution) that allow comparing the different spatial scenarios of contamination regarding the demographic response at the scale of the whole river network. An analysis of the sensitivity of these end points to lower order parameters enables us to link the local effects of cadmium to the global demographic behavior of the brown trout population. Such a link is of broad interest in the point of view of ecotoxicological management.

  4. Phylogenetic congruence of lichenised fungi and algae is affected by spatial scale and taxonomic diversity.

    PubMed

    Buckley, Hannah L; Rafat, Arash; Ridden, Johnathon D; Cruickshank, Robert H; Ridgway, Hayley J; Paterson, Adrian M

    2014-01-01

    The role of species' interactions in structuring biological communities remains unclear. Mutualistic symbioses, involving close positive interactions between two distinct organismal lineages, provide an excellent means to explore the roles of both evolutionary and ecological processes in determining how positive interactions affect community structure. In this study, we investigate patterns of co-diversification between fungi and algae for a range of New Zealand lichens at the community, genus, and species levels and explore explanations for possible patterns related to spatial scale and pattern, taxonomic diversity of the lichens considered, and the level sampling replication. We assembled six independent datasets to compare patterns in phylogenetic congruence with varied spatial extent of sampling, taxonomic diversity and level of specimen replication. For each dataset, we used the DNA sequences from the ITS regions of both the fungal and algal genomes from lichen specimens to produce genetic distance matrices. Phylogenetic congruence between fungi and algae was quantified using distance-based redundancy analysis and we used geographic distance matrices in Moran's eigenvector mapping and variance partitioning to evaluate the effects of spatial variation on the quantification of phylogenetic congruence. Phylogenetic congruence was highly significant for all datasets and a large proportion of variance in both algal and fungal genetic distances was explained by partner genetic variation. Spatial variables, primarily at large and intermediate scales, were also important for explaining genetic diversity patterns in all datasets. Interestingly, spatial structuring was stronger for fungal than algal genetic variation. As the spatial extent of the samples increased, so too did the proportion of explained variation that was shared between the spatial variables and the partners' genetic variation. Different lichen taxa showed some variation in their phylogenetic congruence and spatial genetic patterns and where greater sample replication was used, the amount of variation explained by partner genetic variation increased. Our results suggest that the phylogenetic congruence pattern, at least at small spatial scales, is likely due to reciprocal co-adaptation or co-dispersal. However, the detection of these patterns varies among different lichen taxa, across spatial scales and with different levels of sample replication. This work provides insight into the complexities faced in determining how evolutionary and ecological processes may interact to generate diversity in symbiotic association patterns at the population and community levels. Further, it highlights the critical importance of considering sample replication, taxonomic diversity and spatial scale in designing studies of co-diversification.

  5. Temporal and Spatial Scales Matter: Circannual Habitat Selection by Bird Communities in Vineyards

    PubMed Central

    Arlettaz, Raphaël; Korner, Pius

    2017-01-01

    Vineyards are likely to be regionally important for wildlife, but we lack biodiversity studies in this agroecosystem which is undergoing a rapid management revolution. As vine cultivation is restricted to arid and warm climatic regions, biodiversity-friendly management would promote species typical of southern biomes. Vineyards are often intensively cultivated, mostly surrounded by few natural features and offering a fairly mineral appearance with little ground vegetation cover. Ground vegetation cover and composition may further strongly vary with respect to season, influencing patterns of habitat selection by ecological communities. We investigated season-specific bird-habitat associations to highlight the importance of semi-natural habitat features and vineyard ground vegetation cover throughout the year. Given that avian habitat selection varies according to taxa, guilds and spatial scale, we modelled bird-habitat associations in all months at two spatial scales using mixed effects regression models. At the landscape scale, birds were recorded along 10 1-km long transects in Southwestern Switzerland (February 2014 –January 2015). At the field scale, we compared the characteristics of visited and unvisited vineyard fields (hereafter called parcels). Bird abundance in vineyards tripled in winter compared to summer. Vineyards surrounded by a greater amount of hedges and small woods harboured higher bird abundance, species richness and diversity, especially during the winter season. Regarding ground vegetation, birds showed a season-specific habitat selection pattern, notably a marked preference for ground-vegetated parcels in winter and for intermediate vegetation cover in spring and summer. These season-specific preferences might be related to species-specific life histories: more insectivorous, ground-foraging species occur during the breeding season whereas granivores predominate in winter. These results highlight the importance of investigating habitat selection at different spatial scales and all along the annual cycle in order to draw practical, season-specific management recommendations for promoting avian biodiversity in farmland. PMID:28146570

  6. Grassland productivity in response to nutrient additions and herbivory is scale-dependent

    PubMed Central

    Baldwin, Douglas C.; Naithani, Kusum J.

    2016-01-01

    Vegetation response to nutrient addition can vary across space, yet studies that explicitly incorporate spatial pattern into experimental approaches are rare. To explore whether there are unique spatial scales (grains) at which grass response to nutrients and herbivory is best expressed, we imposed a large (∼3.75 ha) experiment in a South African coastal grassland ecosystem. In two of six 60 × 60 m grassland plots, we imposed a scaled sampling design in which fertilizer was added in replicated sub-plots (1 × 1 m, 2 × 2 m, and 4 × 4 m). The remaining plots either received no additions or were fertilized evenly across the entire area. Three of the six plots were fenced to exclude herbivory. We calculated empirical semivariograms for all plots one year following nutrient additions to determine whether the scale of grass response (biomass and nutrient concentrations) corresponded to the scale of the sub-plot additions and compared these results to reference plots (unfertilized or unscaled) and to plots with and without herbivory. We compared empirical semivariogram parameters to parameters from semivariograms derived from a set of simulated landscapes (neutral models). Empirical semivariograms showed spatial structure in plots that received multi-scaled nutrient additions, particularly at the 2 × 2 m grain. The level of biomass response was predicted by foliar P concentration and, to a lesser extent, N, with the treatment effect of herbivory having a minimal influence. Neutral models confirmed the length scale of the biomass response and indicated few differences due to herbivory. Overall, we conclude that interpretation of nutrient limitation in grasslands is dependent on the grain used to measure grass response and that herbivory had a secondary effect. PMID:27920956

  7. Temporal Changes in Forest Contexts at Multiple Extents: Three Decades of Fragmentation in the Gran Chaco (1979-2010), Central Argentina.

    PubMed

    Frate, Ludovico; Acosta, Alicia T R; Cabido, Marcelo; Hoyos, Laura; Carranza, Maria Laura

    2015-01-01

    The context in which a forest exists strongly influences its function and sustainability. Unveiling the multi-scale nature of forest fragmentation context is crucial to understand how human activities affect the spatial patterns of forests across a range of scales. However, this issue remains almost unexplored in subtropical ecosystems. In this study, we analyzed temporal changes (1979-2010) in forest contexts in the Argentinean dry Chaco at multiple extents. We classified forests over the last three decades based on forest context amount (Pf) and structural connectivity (Pff), which were measured using a moving window approach fixed at eight different extents (from local, ~ 6 ha, to regional, ~ 8300 ha). Specific multi-scale forest context profiles (for the years 1979 and 2010) were defined by projecting Pf vs. Pff mean values and were compared across spatial extents. The distributions of Pf across scales were described by scalograms and their shapes over time were compared. The amount of agricultural land and rangelands across the scales were also analyzed. The dry Chaco has undergone an intensive process of fragmentation, resulting in a shift from landscapes dominated by forests with gaps of rangelands to landscapes where small forest patches are embedded in agricultural lands. Multi-scale fragmentation analysis depicted landscapes in which local exploitation, which perforates forest cover, occurs alongside extensive forest clearings, reducing forests to small and isolated patches surrounded by agricultural lands. In addition, the temporal diminution of Pf's variability along with the increment of the mean slope of the Pf 's scalograms, indicate a simplification of the spatial pattern of forest over time. The observed changes have most likely been the result of the interplay between human activities and environmental constraints, which have shaped the spatial patterns of forests across scales. Based on our results, strategies for the conservation and sustainable management of the dry Chaco should take into account both the context of each habitat location and the scales over which a forest pattern might be preserved, altered or restored.

  8. Temporal Changes in Forest Contexts at Multiple Extents: Three Decades of Fragmentation in the Gran Chaco (1979-2010), Central Argentina

    PubMed Central

    Frate, Ludovico; Acosta, Alicia T. R.; Cabido, Marcelo; Hoyos, Laura; Carranza, Maria Laura

    2015-01-01

    The context in which a forest exists strongly influences its function and sustainability. Unveiling the multi-scale nature of forest fragmentation context is crucial to understand how human activities affect the spatial patterns of forests across a range of scales. However, this issue remains almost unexplored in subtropical ecosystems. In this study, we analyzed temporal changes (1979–2010) in forest contexts in the Argentinean dry Chaco at multiple extents. We classified forests over the last three decades based on forest context amount (P f) and structural connectivity (P ff), which were measured using a moving window approach fixed at eight different extents (from local, ~ 6 ha, to regional, ~ 8300 ha). Specific multi-scale forest context profiles (for the years 1979 and 2010) were defined by projecting P f vs. P ff mean values and were compared across spatial extents. The distributions of P f across scales were described by scalograms and their shapes over time were compared. The amount of agricultural land and rangelands across the scales were also analyzed. The dry Chaco has undergone an intensive process of fragmentation, resulting in a shift from landscapes dominated by forests with gaps of rangelands to landscapes where small forest patches are embedded in agricultural lands. Multi-scale fragmentation analysis depicted landscapes in which local exploitation, which perforates forest cover, occurs alongside extensive forest clearings, reducing forests to small and isolated patches surrounded by agricultural lands. In addition, the temporal diminution of P f’s variability along with the increment of the mean slope of the P f ‘s scalograms, indicate a simplification of the spatial pattern of forest over time. The observed changes have most likely been the result of the interplay between human activities and environmental constraints, which have shaped the spatial patterns of forests across scales. Based on our results, strategies for the conservation and sustainable management of the dry Chaco should take into account both the context of each habitat location and the scales over which a forest pattern might be preserved, altered or restored. PMID:26630387

  9. Process, pattern and scale: hydrogeomorphology and plant diversity in forested wetlands across multiple spatial scales

    NASA Astrophysics Data System (ADS)

    Alexander, L.; Hupp, C. R.; Forman, R. T.

    2002-12-01

    Many geodisturbances occur across large spatial scales, spanning entire landscapes and creating ecological phenomena in their wake. Ecological study at large scales poses special problems: (1) large-scale studies require large-scale resources, and (2) sampling is not always feasible at the appropriate scale, and researchers rely on data collected at smaller scales to interpret patterns across broad regions. A criticism of landscape ecology is that findings at small spatial scales are "scaled up" and applied indiscriminately across larger spatial scales. In this research, landscape scaling is addressed through process-pattern relationships between hydrogeomorphic processes and patterns of plant diversity in forested wetlands. The research addresses: (1) whether patterns and relationships between hydrogeomorphic, vegetation, and spatial variables can transcend scale; and (2) whether data collected at small spatial scales can be used to describe patterns and relationships across larger spatial scales. Field measurements of hydrologic, geomorphic, spatial, and vegetation data were collected or calculated for 15- 1-ha sites on forested floodplains of six (6) Chesapeake Bay Coastal Plain streams over a total area of about 20,000 km2. Hydroperiod (day/yr), floodplain surface elevation range (m), discharge (m3/s), stream power (kg-m/s2), sediment deposition (mm/yr), relative position downstream and other variables were used in multivariate analyses to explain differences in species richness, tree diversity (Shannon-Wiener Diversity Index H'), and plant community composition at four spatial scales. Data collected at the plot (400-m2) and site- (c. 1-ha) scales are applied to and tested at the river watershed and regional spatial scales. Results indicate that plant species richness and tree diversity (Shannon-Wiener diversity index H') can be described by hydrogeomorphic conditions at all scales, but are best described at the site scale. Data collected at plot and site scales are tested for spatial heterogeneity across the Chesapeake Bay Coastal Plain using a geostatistical variogram, and multiple regression analysis is used to relate plant diversity, spatial, and hydrogeomorphic variables across Coastal Plain regions and hydrologic regimes. Results indicate that relationships between hydrogeomorphic processes and patterns of plant diversity at finer scales can proxy relationships at coarser scales in some, not all, cases. Findings also suggest that data collected at small scales can be used to describe trends across broader scales under limited conditions.

  10. Spatial consistency of chinook salmon redd distribution within and among years in the Cowlitz River, Washington

    USGS Publications Warehouse

    Klett, Katherine J.C.; Torgersen, Christian E.; Henning, Julie A.; Murray, Christopher J.

    2013-01-01

    We investigated the spawning patterns of Chinook Salmon Oncorhynchus tshawytscha on the lower Cowlitz River, Washington, using a unique set of fine- and coarse-scale temporal and spatial data collected during biweekly aerial surveys conducted in 1991–2009 (500 m to 28 km resolution) and 2008–2009 (100–500 m resolution). Redd locations were mapped from a helicopter during 2008 and 2009 with a hand-held GPS synchronized with in-flight audio recordings. We examined spatial patterns of Chinook Salmon redd reoccupation among and within years in relation to segment-scale geomorphic features. Chinook Salmon spawned in the same sections each year with little variation among years. On a coarse scale, 5 years (1993, 1998, 2000, 2002, and 2009) were compared for reoccupation. Redd locations were highly correlated among years. Comparisons on a fine scale (500 m) between 2008 and 2009 also revealed a high degree of consistency among redd locations. On a finer temporal scale, we observed that Chinook Salmon spawned in the same sections during the first and last week. Redds were clustered in both 2008 and 2009. Regression analysis with a generalized linear model at the 500-m scale indicated that river kilometer and channel bifurcation were positively associated with redd density, whereas sinuosity was negatively associated with redd density. Collecting data on specific redd locations with a GPS during aerial surveys was logistically feasible and cost effective and greatly enhanced the spatial precision of Chinook Salmon spawning surveys.

  11. Forecasting Influenza Outbreaks in Boroughs and Neighborhoods of New York City

    PubMed Central

    2016-01-01

    The ideal spatial scale, or granularity, at which infectious disease incidence should be monitored and forecast has been little explored. By identifying the optimal granularity for a given disease and host population, and matching surveillance and prediction efforts to this scale, response to emergent and recurrent outbreaks can be improved. Here we explore how granularity and representation of spatial structure affect influenza forecast accuracy within New York City. We develop network models at the borough and neighborhood levels, and use them in conjunction with surveillance data and a data assimilation method to forecast influenza activity. These forecasts are compared to an alternate system that predicts influenza for each borough or neighborhood in isolation. At the borough scale, influenza epidemics are highly synchronous despite substantial differences in intensity, and inclusion of network connectivity among boroughs generally improves forecast accuracy. At the neighborhood scale, we observe much greater spatial heterogeneity among influenza outbreaks including substantial differences in local outbreak timing and structure; however, inclusion of the network model structure generally degrades forecast accuracy. One notable exception is that local outbreak onset, particularly when signal is modest, is better predicted with the network model. These findings suggest that observation and forecast at sub-municipal scales within New York City provides richer, more discriminant information on influenza incidence, particularly at the neighborhood scale where greater heterogeneity exists, and that the spatial spread of influenza among localities can be forecast. PMID:27855155

  12. Scale-dependent geomorphic responses to active restoration and implications for cutthroat trout

    NASA Astrophysics Data System (ADS)

    Salant, N.; Miller, S. W.

    2009-12-01

    The predominant goal of instream habitat restoration is to increase the diversity, density and/or biomass of aquatic organisms through enhanced physical heterogeneity and increased food availability. In physically homogenized systems, habitat restoration is most commonly achieved at the reach-scale through the addition of structures or channel reconfiguration. Despite the completion of over 6,000 restoration projects in the United States, studies of fish responses to habitat restoration have largely produced equivocal results. Paradoxically, restoration monitoring overwhelmingly focuses on fish response without understanding how these responses link to the physical variables being altered and the scale at which geomorphic changes occur. Our study investigates whether instream habitat restoration affects geomorphic conditions at spatial scales relevant to the organism of interest (i.e. the spatial scale of the variables limiting to that organism). We measure the effects of active restoration on geomorphic metrics at three spatial scales (local, unit, and reach) using a before-after-control-impact design in a historically disturbed and heavily managed cutthroat trout stream. Observed trout habitat preferences (for spawning and juvenile/adult residence) are used to identify the limiting physical variables and are compared to the scale of spatially explicit geomorphic responses. Four reaches representing three different stages of restoration (before, one month and one year after) are surveyed for local-scale physical conditions, unit- and reach-scale morphology, resident fish use, and redd locations. Local-scale physical metrics include depth, nearbed and average velocity, overhead cover, particle size, and water quality metrics. Point measurements stratified by morphological unit are used to determine physical variability among unit types. Habitat complexity and availability are assessed at the reach-scale from topographic surveys and unit maps. Our multi-scale, process-based approach evaluates whether a commonly used restoration strategy creates geomorphic heterogeneity at scales relevant to fish diversity and microhabitat utilization, an understanding that will improve the efficiency and success of future restoration projects.

  13. Simulation of wave propagation in three-dimensional random media

    NASA Astrophysics Data System (ADS)

    Coles, Wm. A.; Filice, J. P.; Frehlich, R. G.; Yadlowsky, M.

    1995-04-01

    Quantitative error analyses for the simulation of wave propagation in three-dimensional random media, when narrow angular scattering is assumed, are presented for plane-wave and spherical-wave geometry. This includes the errors that result from finite grid size, finite simulation dimensions, and the separation of the two-dimensional screens along the propagation direction. Simple error scalings are determined for power-law spectra of the random refractive indices of the media. The effects of a finite inner scale are also considered. The spatial spectra of the intensity errors are calculated and compared with the spatial spectra of

  14. Development of Spatiotemporal Bias-Correction Techniques for Downscaling GCM Predictions

    NASA Astrophysics Data System (ADS)

    Hwang, S.; Graham, W. D.; Geurink, J.; Adams, A.; Martinez, C. J.

    2010-12-01

    Accurately representing the spatial variability of precipitation is an important factor for predicting watershed response to climatic forcing, particularly in small, low-relief watersheds affected by convective storm systems. Although Global Circulation Models (GCMs) generally preserve spatial relationships between large-scale and local-scale mean precipitation trends, most GCM downscaling techniques focus on preserving only observed temporal variability on point by point basis, not spatial patterns of events. Downscaled GCM results (e.g., CMIP3 ensembles) have been widely used to predict hydrologic implications of climate variability and climate change in large snow-dominated river basins in the western United States (Diffenbaugh et al., 2008; Adam et al., 2009). However fewer applications to smaller rain-driven river basins in the southeastern US (where preserving spatial variability of rainfall patterns may be more important) have been reported. In this study a new method was developed to bias-correct GCMs to preserve both the long term temporal mean and variance of the precipitation data, and the spatial structure of daily precipitation fields. Forty-year retrospective simulations (1960-1999) from 16 GCMs were collected (IPCC, 2007; WCRP CMIP3 multi-model database: https://esg.llnl.gov:8443/), and the daily precipitation data at coarse resolution (i.e., 280km) were interpolated to 12km spatial resolution and bias corrected using gridded observations over the state of Florida (Maurer et al., 2002; Wood et al, 2002; Wood et al, 2004). In this method spatial random fields which preserved the observed spatial correlation structure of the historic gridded observations and the spatial mean corresponding to the coarse scale GCM daily rainfall were generated. The spatiotemporal variability of the spatio-temporally bias-corrected GCMs were evaluated against gridded observations, and compared to the original temporally bias-corrected and downscaled CMIP3 data for the central Florida. The hydrologic response of two southwest Florida watersheds to the gridded observation data, the original bias corrected CMIP3 data, and the new spatiotemporally corrected CMIP3 predictions was compared using an integrated surface-subsurface hydrologic model developed by Tampa Bay Water.

  15. Comparing estimates of population change from occupancy and mark-recapture models for a territorial species

    Treesearch

    Mary M. Conner; John J. Keane; Claire V. Gallagher; Thomas E. Munton; Paula A. Shaklee

    2016-01-01

    Monitoring studies often use marked animals to estimate population abundance at small spatial scales. However, at smaller scales, occupancy sampling, which uses detection/nondetection data, may be useful where sites are approximately territories, and occupancy dynamics should be strongly correlated with population dynamics. Occupancy monitoring has advantages...

  16. Community assembly of the ferns of Florida.

    PubMed

    Sessa, Emily B; Chambers, Sally M; Li, Daijiang; Trotta, Lauren; Endara, Lorena; Burleigh, J Gordon; Baiser, Benjamin

    2018-03-01

    Many ecological and evolutionary processes shape the assembly of organisms into local communities from a regional pool of species. We analyzed phylogenetic and functional diversity to understand community assembly of the ferns of Florida at two spatial scales. We built a phylogeny for 125 of the 141 species of ferns in Florida using five chloroplast markers. We calculated mean pairwise dissimilarity (MPD) and mean nearest taxon distance (MNTD) from phylogenetic distances and functional trait data for both spatial scales and compared the results to null models to assess significance. Our results for over vs. underdispersion in functional and phylogenetic diversity differed depending on spatial scale and metric considered. At the county scale, MPD revealed evidence for phylogenetic overdispersion, while MNTD revealed phylogenetic and functional underdispersion, and at the conservation area scale, MPD revealed phylogenetic and functional underdispersion while MNTD revealed evidence only of functional underdispersion. Our results are consistent with environmental filtering playing a larger role at the smaller, conservation area scale. The smaller spatial units are likely composed of fewer local habitat types that are selecting for closely related species, with the larger-scale units more likely to be composed of multiple habitat types that bring together a larger pool of species from across the phylogeny. Several aspects of fern biology, including their unique physiology and water relations and the importance of the independent gametophyte stage of the life cycle, make ferns highly sensitive to local, microhabitat conditions. © 2018 The Authors. American Journal of Botany is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America.

  17. Multi-scale approach to the environmental factors effects on spatio-temporal variability of Chironomus salinarius (Diptera: Chironomidae) in a French coastal lagoon

    NASA Astrophysics Data System (ADS)

    Cartier, V.; Claret, C.; Garnier, R.; Fayolle, S.; Franquet, E.

    2010-03-01

    The complexity of the relationships between environmental factors and organisms can be revealed by sampling designs which consider the contribution to variability of different temporal and spatial scales, compared to total variability. From a management perspective, a multi-scale approach can lead to time-saving. Identifying environmental patterns that help maintain patchy distribution is fundamental in studying coastal lagoons, transition zones between continental and marine waters characterised by great environmental variability on spatial and temporal scales. They often present organic enrichment inducing decreased species richness and increased densities of opportunist species like C hironomus salinarius, a common species that tends to swarm and thus constitutes a nuisance for human populations. This species is dominant in the Bolmon lagoon, a French Mediterranean coastal lagoon under eutrophication. Our objective was to quantify variability due to both spatial and temporal scales and identify the contribution of different environmental factors to this variability. The population of C. salinarius was sampled from June 2007 to June 2008 every two months at 12 sites located in two areas of the Bolmon lagoon, at two different depths, with three sites per area-depth combination. Environmental factors (temperature, dissolved oxygen both in sediment and under water surface, sediment organic matter content and grain size) and microbial activities (i.e. hydrolase activities) were also considered as explanatory factors of chironomid densities and distribution. ANOVA analysis reveals significant spatial differences regarding the distribution of chironomid larvae for the area and the depth scales and their interaction. The spatial effect is also revealed for dissolved oxygen (water), salinity and fine particles (area scale), and for water column depth. All factors but water column depth show a temporal effect. Spearman's correlations highlight the seasonal effect (temperature, dissolved oxygen in sediment and water) as well as the effect of microbial activities on chironomid larvae. Our results show that a multi-scale approach identifies patchy distribution, even when there is relative environmental homogeneity.

  18. A methodology to link national and local information for spatial targeting of ammonia mitigation efforts

    NASA Astrophysics Data System (ADS)

    Carnell, E. J.; Misselbrook, T. H.; Dore, A. J.; Sutton, M. A.; Dragosits, U.

    2017-09-01

    The effects of atmospheric nitrogen (N) deposition are evident in terrestrial ecosystems worldwide, with eutrophication and acidification leading to significant changes in species composition. Substantial reductions in N deposition from nitrogen oxides emissions have been achieved in recent decades. By contrast, ammonia (NH3) emissions from agriculture have not decreased substantially and are typically highly spatially variable, making efficient mitigation challenging. One solution is to target NH3 mitigation measures spatially in source landscapes to maximize the benefits for nature conservation. The paper develops an approach to link national scale data and detailed local data to help identify suitable measures for spatial targeting of local sources near designated Special Areas of Conservation (SACs). The methodology combines high-resolution national data on emissions, deposition and source attribution with local data on agricultural management and site conditions. Application of the methodology for the full set of 240 SACs in England found that agriculture contributes ∼45 % of total N deposition. Activities associated with cattle farming represented 54 % of agricultural NH3 emissions within 2 km of the SACs, making them a major contributor to local N deposition, followed by mineral fertiliser application (21 %). Incorporation of local information on agricultural management practices at seven example SACs provided the means to correct outcomes compared with national-scale emission factors. The outcomes show how national scale datasets can provide information on N deposition threats at landscape to national scales, while local-scale information helps to understand the feasibility of mitigation measures, including the impact of detailed spatial targeting on N deposition rates to designated sites.

  19. The inclusion of ocean-current effects in a tidal-current model as forcing in the convection term and its application to the mesoscale fate of CO2 seeping from the seafloor

    NASA Astrophysics Data System (ADS)

    Sakaizawa, Ryosuke; Kawai, Takaya; Sato, Toru; Oyama, Hiroyuki; Tsumune, Daisuke; Tsubono, Takaki; Goto, Koichi

    2018-03-01

    The target seas of tidal-current models are usually semi-closed bays, minimally affected by ocean currents. For these models, tidal currents are simulated in computational domains with a spatial scale of a couple hundred kilometers or less, by setting tidal elevations at their open boundaries. However, when ocean currents cannot be ignored in the sea areas of interest, such as in open seas near coastlines, it is necessary to include ocean-current effects in these tidal-current models. In this study, we developed a numerical method to analyze tidal currents near coasts by incorporating pre-calculated ocean-current velocities. First, a large regional-scale simulation with a spatial scale of several thousand kilometers was conducted and temporal changes in the ocean-current velocity at each grid point were stored. Next, the spatially and temporally interpolated ocean-current velocity was incorporated as forcing into the cross terms of the convection term of a tidal-current model having computational domains with spatial scales of hundreds of kilometers or less. Then, we applied this method to the diffusion of dissolved CO2 in a sea area off Tomakomai, Japan, and compared the numerical results and measurements to validate the proposed method.

  20. Baseflow physical characteristics differ at multiple spatial scales in stream networks across diverse biomes

    Treesearch

    Janine Ruegg; Walter K. Dodds; Melinda D. Daniels; Ken R. Sheehan; Christina L. Baker; William B. Bowden; Kaitlin J. Farrell; Michael B. Flinn; Tamara K. Harms; Jeremy B. Jones; Lauren E. Koenig; John S. Kominoski; William H. McDowell; Samuel P. Parker; Amy D. Rosemond; Matt T. Trentman; Matt Whiles; Wilfred M. Wollheim

    2016-01-01

    ContextSpatial scaling of ecological processes is facilitated by quantifying underlying habitat attributes. Physical and ecological patterns are often measured at disparate spatial scales limiting our ability to quantify ecological processes at broader spatial scales using physical attributes.

  1. Spatial Scaling of Environmental Variables Improves Species-Habitat Models of Fishes in a Small, Sand-Bed Lowland River

    PubMed Central

    Radinger, Johannes; Wolter, Christian; Kail, Jochem

    2015-01-01

    Habitat suitability and the distinct mobility of species depict fundamental keys for explaining and understanding the distribution of river fishes. In recent years, comprehensive data on river hydromorphology has been mapped at spatial scales down to 100 m, potentially serving high resolution species-habitat models, e.g., for fish. However, the relative importance of specific hydromorphological and in-stream habitat variables and their spatial scales of influence is poorly understood. Applying boosted regression trees, we developed species-habitat models for 13 fish species in a sand-bed lowland river based on river morphological and in-stream habitat data. First, we calculated mean values for the predictor variables in five distance classes (from the sampling site up to 4000 m up- and downstream) to identify the spatial scale that best predicts the presence of fish species. Second, we compared the suitability of measured variables and assessment scores related to natural reference conditions. Third, we identified variables which best explained the presence of fish species. The mean model quality (AUC = 0.78, area under the receiver operating characteristic curve) significantly increased when information on the habitat conditions up- and downstream of a sampling site (maximum AUC at 2500 m distance class, +0.049) and topological variables (e.g., stream order) were included (AUC = +0.014). Both measured and assessed variables were similarly well suited to predict species’ presence. Stream order variables and measured cross section features (e.g., width, depth, velocity) were best-suited predictors. In addition, measured channel-bed characteristics (e.g., substrate types) and assessed longitudinal channel features (e.g., naturalness of river planform) were also good predictors. These findings demonstrate (i) the applicability of high resolution river morphological and instream-habitat data (measured and assessed variables) to predict fish presence, (ii) the importance of considering habitat at spatial scales larger than the sampling site, and (iii) that the importance of (river morphological) habitat characteristics differs depending on the spatial scale. PMID:26569119

  2. Scaling water and energy fluxes in climate systems - Three land-atmospheric modeling experiments

    NASA Technical Reports Server (NTRS)

    Wood, Eric F.; Lakshmi, Venkataraman

    1993-01-01

    Three numerical experiments that investigate the scaling of land-surface processes - either of the inputs or parameters - are reported, and the aggregated processes are compared to the spatially variable case. The first is the aggregation of the hydrologic response in a catchment due to rainfall during a storm event and due to evaporative demands during interstorm periods. The second is the spatial and temporal aggregation of latent heat fluxes, as calculated from SiB. The third is the aggregation of remotely sensed land vegetation and latent and sensible heat fluxes using TM data from the FIFE experiment of 1987 in Kansas. In all three experiments it was found that the surface fluxes and land characteristics can be scaled, and that macroscale models based on effective parameters are sufficient to account for the small-scale heterogeneities investigated.

  3. Using Electromagnetic Induction Technique to Detect Hydropedological Dynamics: Principles and Applications

    NASA Astrophysics Data System (ADS)

    Zhu, Qing; Liao, Kaihua; Doolittle, James; Lin, Henry

    2014-05-01

    Hydropedological dynamics including soil moisture variation, subsurface flow, and spatial distributions of different soil properties are important parameters in ecological, environmental, hydrological, and agricultural modeling and applications. However, technical gap exists in mapping these dynamics at intermediate spatial scale (e.g., farm and catchment scales). At intermediate scales, in-situ monitoring provides detailed data, but is restricted in number and spatial coverage; while remote sensing provides more acceptable spatial coverage, but has comparatively low spatial resolution, limited observation depths, and is greatly influenced by the surface condition and climate. As a non-invasive, fast, and convenient geophysical tool, electromagnetic induction (EMI) measures soil apparent electrical conductivity (ECa) and has great potential to bridge this technical gap. In this presentation, principles of different EMI meters are briefly introduced. Then, case studies of using repeated EMI to detect spatial distributions of subsurface convergent flow, soil moisture dynamics, soil types and their transition zones, and different soil properties are presented. The suitability, effectiveness, and accuracy of EMI are evaluated for mapping different hydropedological dynamics. Lastly, contributions of different hydropedological and terrain properties on soil ECa are quantified under different wetness conditions, seasons, and land use types using Classification and Regression Tree model. Trend removal and residual analysis are then used for further mining of EMI survey data. Based on these analyses, proper EMI survey designs and data processing are proposed.

  4. Fine-scale spatial distribution of the common lugworm Arenicola marina, and effects of intertidal clam fishing

    NASA Astrophysics Data System (ADS)

    Boldina, Inna; Beninger, Peter G.

    2014-04-01

    Despite its ubiquity and its role as an ecosystem engineer on temperate intertidal mudflats, little is known of the spatial ecology of the lugworm Arenicola marina. We estimated lugworm densities and analyzed the spatial distribution of A. marina on a French Atlantic mudflat subjected to long-term clam digging activities, and compared these to a nearby pristine reference mudflat, using a combination of geostatistical techniques: point-pattern analysis, autocorrelation, and wavelet analysis. Lugworm densities were an order of magnitude greater at the reference site. Although A. marina showed an aggregative spatial distribution at both sites, the characteristics and intensity of aggregation differed markedly between sites. The reference site showed an inhibition process (regular distribution) at distances <7.5 cm, whereas the impacted site showed a random distribution at this scale. At distances from 15 cm to several tens of meters, the spatial distribution of A. marina was clearly aggregated at both sites; however, the autocorrelation strength was much weaker at the impacted site. In addition, the non-impacted site presented multi-scale spatial distribution, which was not evident at the impacted site. The differences observed between the spatial distributions of the fishing-impacted vs. the non-impacted site reflect similar findings for other components of these two mudflat ecosystems, suggesting common community-level responses to prolonged mechanical perturbation: a decrease in naturally-occurring aggregation. This change may have consequences for basic biological characteristics such as reproduction, recruitment, growth, and feeding.

  5. Multivariate analysis of scale-dependent associations between bats and landscape structure

    USGS Publications Warehouse

    Gorresen, P.M.; Willig, M.R.; Strauss, R.E.

    2005-01-01

    The assessment of biotic responses to habitat disturbance and fragmentation generally has been limited to analyses at a single spatial scale. Furthermore, methods to compare responses between scales have lacked the ability to discriminate among patterns related to the identity, strength, or direction of associations of biotic variables with landscape attributes. We present an examination of the relationship of population- and community-level characteristics of phyllostomid bats with habitat features that were measured at multiple spatial scales in Atlantic rain forest of eastern Paraguay. We used a matrix of partial correlations between each biotic response variable (i.e., species abundance, species richness, and evenness) and a suite of landscape characteristics to represent the multifaceted associations of bats with spatial structure. Correlation matrices can correspond based on either the strength (i.e., magnitude) or direction (i.e., sign) of association. Therefore, a simulation model independently evaluated correspondence in the magnitude and sign of correlations among scales, and results were combined via a meta-analysis to provide an overall test of significance. Our approach detected both species-specific differences in response to landscape structure and scale dependence in those responses. This matrix-simulation approach has broad applicability to ecological situations in which multiple intercorrelated factors contribute to patterns in space or time. ?? 2005 by the Ecological Society of America.

  6. The role of environmental variables in structuring landscape-scale species distributions in seafloor habitats.

    PubMed

    Kraan, Casper; Aarts, Geert; Van der Meer, Jaap; Piersma, Theunis

    2010-06-01

    Ongoing statistical sophistication allows a shift from describing species' spatial distributions toward statistically disentangling the possible roles of environmental variables in shaping species distributions. Based on a landscape-scale benthic survey in the Dutch Wadden Sea, we show the merits of spatially explicit generalized estimating equations (GEE). The intertidal macrozoobenthic species, Macoma balthica, Cerastoderma edule, Marenzelleria viridis, Scoloplos armiger, Corophium volutator, and Urothoe poseidonis served as test cases, with median grain-size and inundation time as typical environmental explanatory variables. GEEs outperformed spatially naive generalized linear models (GLMs), and removed much residual spatial structure, indicating the importance of median grain-size and inundation time in shaping landscape-scale species distributions in the intertidal. GEE regression coefficients were smaller than those attained with GLM, and GEE standard errors were larger. The best fitting GEE for each species was used to predict species' density in relation to median grain-size and inundation time. Although no drastic changes were noted compared to previous work that described habitat suitability for benthic fauna in the Wadden Sea, our predictions provided more detailed and unbiased estimates of the determinants of species-environment relationships. We conclude that spatial GEEs offer the necessary methodological advances to further steps toward linking pattern to process.

  7. Grid scale drives the scale and long-term stability of place maps

    PubMed Central

    Mallory, Caitlin S; Hardcastle, Kiah; Bant, Jason S; Giocomo, Lisa M

    2018-01-01

    Medial entorhinal cortex (MEC) grid cells fire at regular spatial intervals and project to the hippocampus, where place cells are active in spatially restricted locations. One feature of the grid population is the increase in grid spatial scale along the dorsal-ventral MEC axis. However, the difficulty in perturbing grid scale without impacting the properties of other functionally-defined MEC cell types has obscured how grid scale influences hippocampal coding and spatial memory. Here, we use a targeted viral approach to knock out HCN1 channels selectively in MEC, causing grid scale to expand while leaving other MEC spatial and velocity signals intact. Grid scale expansion resulted in place scale expansion in fields located far from environmental boundaries, reduced long-term place field stability and impaired spatial learning. These observations, combined with simulations of a grid-to-place cell model and position decoding of place cells, illuminate how grid scale impacts place coding and spatial memory. PMID:29335607

  8. Additive Partitioning of Coral Reef Fish Diversity across Hierarchical Spatial Scales throughout the Caribbean

    PubMed Central

    Francisco-Ramos, Vanessa; Arias-González, Jesús Ernesto

    2013-01-01

    There is an increasing need to examine regional patterns of diversity in coral-reef systems since their biodiversity is declining globally. In this sense, additive partitioning might be useful since it quantifies the contribution of alpha and beta to total diversity across different scales. We applied this approach using an unbalanced design across four hierarchical scales (80 sites, 22 subregions, six ecoregions, and the Caribbean basin). Reef-fish species were compiled from the Reef Environmental Education Foundation (REEF) database and distributions were confirmed with published data. Permutation tests were used to compare observed values to those expected by chance. The primary objective was to identify patterns of reef-fish diversity across multiple spatial scales under different scenarios, examining factors such as fisheries and demographic connectivity. Total diversity at the Caribbean scale was attributed to β-diversity (nearly 62% of the species), with the highest β-diversity at the site scale. α¯-diversity was higher than expected by chance in all scenarios and at all studied scales. This suggests that fish assemblages are more homogenous than expected, particularly at the ecoregion scale. Within each ecoregion, diversity was mainly attributed to alpha, except for the Southern ecoregion where there was a greater difference in species among sites. β-components were lower than expected in all ecoregions, indicating that fishes within each ecoregion are a subsample of the same species pool. The scenario involving the effects of fisheries showed a shift in dominance for β-diversity from regions to subregions, with no major changes to the diversity patterns. In contrast, demographic connectivity partially explained the diversity pattern. β-components were low within connectivity regions and higher than expected by chance when comparing between them. Our results highlight the importance of ecoregions as a spatial scale to conserve local and regional coral reef-fish diversity. PMID:24205311

  9. Hadoop-GIS: A High Performance Spatial Data Warehousing System over MapReduce.

    PubMed

    Aji, Ablimit; Wang, Fusheng; Vo, Hoang; Lee, Rubao; Liu, Qiaoling; Zhang, Xiaodong; Saltz, Joel

    2013-08-01

    Support of high performance queries on large volumes of spatial data becomes increasingly important in many application domains, including geospatial problems in numerous fields, location based services, and emerging scientific applications that are increasingly data- and compute-intensive. The emergence of massive scale spatial data is due to the proliferation of cost effective and ubiquitous positioning technologies, development of high resolution imaging technologies, and contribution from a large number of community users. There are two major challenges for managing and querying massive spatial data to support spatial queries: the explosion of spatial data, and the high computational complexity of spatial queries. In this paper, we present Hadoop-GIS - a scalable and high performance spatial data warehousing system for running large scale spatial queries on Hadoop. Hadoop-GIS supports multiple types of spatial queries on MapReduce through spatial partitioning, customizable spatial query engine RESQUE, implicit parallel spatial query execution on MapReduce, and effective methods for amending query results through handling boundary objects. Hadoop-GIS utilizes global partition indexing and customizable on demand local spatial indexing to achieve efficient query processing. Hadoop-GIS is integrated into Hive to support declarative spatial queries with an integrated architecture. Our experiments have demonstrated the high efficiency of Hadoop-GIS on query response and high scalability to run on commodity clusters. Our comparative experiments have showed that performance of Hadoop-GIS is on par with parallel SDBMS and outperforms SDBMS for compute-intensive queries. Hadoop-GIS is available as a set of library for processing spatial queries, and as an integrated software package in Hive.

  10. Hadoop-GIS: A High Performance Spatial Data Warehousing System over MapReduce

    PubMed Central

    Aji, Ablimit; Wang, Fusheng; Vo, Hoang; Lee, Rubao; Liu, Qiaoling; Zhang, Xiaodong; Saltz, Joel

    2013-01-01

    Support of high performance queries on large volumes of spatial data becomes increasingly important in many application domains, including geospatial problems in numerous fields, location based services, and emerging scientific applications that are increasingly data- and compute-intensive. The emergence of massive scale spatial data is due to the proliferation of cost effective and ubiquitous positioning technologies, development of high resolution imaging technologies, and contribution from a large number of community users. There are two major challenges for managing and querying massive spatial data to support spatial queries: the explosion of spatial data, and the high computational complexity of spatial queries. In this paper, we present Hadoop-GIS – a scalable and high performance spatial data warehousing system for running large scale spatial queries on Hadoop. Hadoop-GIS supports multiple types of spatial queries on MapReduce through spatial partitioning, customizable spatial query engine RESQUE, implicit parallel spatial query execution on MapReduce, and effective methods for amending query results through handling boundary objects. Hadoop-GIS utilizes global partition indexing and customizable on demand local spatial indexing to achieve efficient query processing. Hadoop-GIS is integrated into Hive to support declarative spatial queries with an integrated architecture. Our experiments have demonstrated the high efficiency of Hadoop-GIS on query response and high scalability to run on commodity clusters. Our comparative experiments have showed that performance of Hadoop-GIS is on par with parallel SDBMS and outperforms SDBMS for compute-intensive queries. Hadoop-GIS is available as a set of library for processing spatial queries, and as an integrated software package in Hive. PMID:24187650

  11. Optimal configurations of spatial scale for grid cell firing under noise and uncertainty

    PubMed Central

    Towse, Benjamin W.; Barry, Caswell; Bush, Daniel; Burgess, Neil

    2014-01-01

    We examined the accuracy with which the location of an agent moving within an environment could be decoded from the simulated firing of systems of grid cells. Grid cells were modelled with Poisson spiking dynamics and organized into multiple ‘modules’ of cells, with firing patterns of similar spatial scale within modules and a wide range of spatial scales across modules. The number of grid cells per module, the spatial scaling factor between modules and the size of the environment were varied. Errors in decoded location can take two forms: small errors of precision and larger errors resulting from ambiguity in decoding periodic firing patterns. With enough cells per module (e.g. eight modules of 100 cells each) grid systems are highly robust to ambiguity errors, even over ranges much larger than the largest grid scale (e.g. over a 500 m range when the maximum grid scale is 264 cm). Results did not depend strongly on the precise organization of scales across modules (geometric, co-prime or random). However, independent spatial noise across modules, which would occur if modules receive independent spatial inputs and might increase with spatial uncertainty, dramatically degrades the performance of the grid system. This effect of spatial uncertainty can be mitigated by uniform expansion of grid scales. Thus, in the realistic regimes simulated here, the optimal overall scale for a grid system represents a trade-off between minimizing spatial uncertainty (requiring large scales) and maximizing precision (requiring small scales). Within this view, the temporary expansion of grid scales observed in novel environments may be an optimal response to increased spatial uncertainty induced by the unfamiliarity of the available spatial cues. PMID:24366144

  12. Merging Station Observations with Large-Scale Gridded Data to Improve Hydrological Predictions over Chile

    NASA Astrophysics Data System (ADS)

    Peng, L.; Sheffield, J.; Verbist, K. M. J.

    2016-12-01

    Hydrological predictions at regional-to-global scales are often hampered by the lack of meteorological forcing data. The use of large-scale gridded meteorological data is able to overcome this limitation, but these data are subject to regional biases and unrealistic values at local scale. This is especially challenging in regions such as Chile, where climate exhibits high spatial heterogeneity as a result of long latitude span and dramatic elevation changes. However, regional station-based observational datasets are not fully exploited and have the potential of constraining biases and spatial patterns. This study aims at adjusting precipitation and temperature estimates from the Princeton University global meteorological forcing (PGF) gridded dataset to improve hydrological simulations over Chile, by assimilating 982 gauges from the Dirección General de Aguas (DGA). To merge station data with the gridded dataset, we use a state-space estimation method to produce optimal gridded estimates, considering both the error of the station measurements and the gridded PGF product. The PGF daily precipitation, maximum and minimum temperature at 0.25° spatial resolution are adjusted for the period of 1979-2010. Precipitation and temperature gauges with long and continuous records (>70% temporal coverage) are selected, while the remaining stations are used for validation. The leave-one-out cross validation verifies the robustness of this data assimilation approach. The merged dataset is then used to force the Variable Infiltration Capacity (VIC) hydrological model over Chile at daily time step which are compared to the observations of streamflow. Our initial results show that the station-merged PGF precipitation effectively captures drizzle and the spatial pattern of storms. Overall the merged dataset has significant improvements compared to the original PGF with reduced biases and stronger inter-annual variability. The invariant spatial pattern of errors between the station data and the gridded product opens up the possibility of merging real-time satellite and intermittent gauge observations to produce more accurate real-time hydrological predictions.

  13. Improving Evapotranspiration Estimates Using Multi-Platform Remote Sensing

    NASA Astrophysics Data System (ADS)

    Knipper, Kyle; Hogue, Terri; Franz, Kristie; Scott, Russell

    2016-04-01

    Understanding the linkages between energy and water cycles through evapotranspiration (ET) is uniquely challenging given its dependence on a range of climatological parameters and surface/atmospheric heterogeneity. A number of methods have been developed to estimate ET either from primarily remote-sensing observations, in-situ measurements, or a combination of the two. However, the scale of many of these methods may be too large to provide needed information about the spatial and temporal variability of ET that can occur over regions with acute or chronic land cover change and precipitation driven fluxes. The current study aims to improve the spatial and temporal variability of ET utilizing only satellite-based observations by incorporating a potential evapotranspiration (PET) methodology with satellite-based down-scaled soil moisture estimates in southern Arizona, USA. Initially, soil moisture estimates from AMSR2 and SMOS are downscaled to 1km through a triangular relationship between MODIS land surface temperature (MYD11A1), vegetation indices (MOD13Q1/MYD13Q1), and brightness temperature. Downscaled soil moisture values are then used to scale PET to actual ET (AET) at a daily, 1km resolution. Derived AET estimates are compared to observed flux tower estimates, the North American Land Data Assimilation System (NLDAS) model output (i.e. Variable Infiltration Capacity (VIC) Macroscale Hydrologic Model, Mosiac Model, and Noah Model simulations), the Operational Simplified Surface Energy Balance Model (SSEBop), and a calibrated empirical ET model created specifically for the region. Preliminary results indicate a strong increase in correlation when incorporating the downscaling technique to original AMSR2 and SMOS soil moisture values, with the added benefit of being able to decipher small scale heterogeneity in soil moisture (riparian versus desert grassland). AET results show strong correlations with relatively low error and bias when compared to flux tower estimates. In addition, AET results show improved bias to those reported by SSEBop, with similar correlations and errors when compared to the empirical ET model. Spatial patterns of estimated AET display patterns representative of the basin's elevation and vegetation characteristics, with improved spatial resolution and temporal heterogeneity when compared to previous models.

  14. Assessment of the Suitability of High Resolution Numerical Weather Model Outputs for Hydrological Modelling in Mountainous Cold Regions

    NASA Astrophysics Data System (ADS)

    Rasouli, K.; Pomeroy, J. W.; Hayashi, M.; Fang, X.; Gutmann, E. D.; Li, Y.

    2017-12-01

    The hydrology of mountainous cold regions has a large spatial variability that is driven both by climate variability and near-surface process variability associated with complex terrain and patterns of vegetation, soils, and hydrogeology. There is a need to downscale large-scale atmospheric circulations towards the fine scales that cold regions hydrological processes operate at to assess their spatial variability in complex terrain and quantify uncertainties by comparison to field observations. In this research, three high resolution numerical weather prediction models, namely, the Intermediate Complexity Atmosphere Research (ICAR), Weather Research and Forecasting (WRF), and Global Environmental Multiscale (GEM) models are used to represent spatial and temporal patterns of atmospheric conditions appropriate for hydrological modelling. An area covering high mountains and foothills of the Canadian Rockies was selected to assess and compare high resolution ICAR (1 km × 1 km), WRF (4 km × 4 km), and GEM (2.5 km × 2.5 km) model outputs with station-based meteorological measurements. ICAR with very low computational cost was run with different initial and boundary conditions and with finer spatial resolution, which allowed an assessment of modelling uncertainty and scaling that was difficult with WRF. Results show that ICAR, when compared with WRF and GEM, performs very well in precipitation and air temperature modelling in the Canadian Rockies, while all three models show a fair performance in simulating wind and humidity fields. Representation of local-scale atmospheric dynamics leading to realistic fields of temperature and precipitation by ICAR, WRF, and GEM makes these models suitable for high resolution cold regions hydrological predictions in complex terrain, which is a key factor in estimating water security in western Canada.

  15. Spatial structure of soil properties at different scales of Mt. Kilimanjaro, Tanzania

    NASA Astrophysics Data System (ADS)

    Kühnel, Anna; Huwe, Bernd

    2013-04-01

    Soils of tropical mountain ecosystems provide important ecosystem services like water and carbon storage, water filtration and erosion control. As these ecosystems are threatened by global warming and the conversion of natural to human-modified landscapes, it is important to understand the implications of these changes. Within the DFG Research Unit "Kilimanjaro ecosystems under global change: Linking biodiversity, biotic interactions and biogeochemical ecosystem processes", we study the spatial heterogeneity of soils and the available water capacity for different land use systems. In the savannah zone of Mt. Kilimanjaro, maize fields are compared to natural savannah ecosystems. In the lower montane forest zone, coffee plantations, traditional home gardens, grasslands and natural forests are studied. We characterize the soils with respect to soil hydrology, emphasizing on the spatial variability of soil texture and bulk density at different scales. Furthermore soil organic carbon and nitrogen, cation exchange capacity and the pH-value are measured. Vis/Nir-Spectroscopy is used to detect small scale physical and chemical heterogeneity within soil profiles, as well as to get information of soil properties on a larger scale. We aim to build a spectral database for these soil properties for the Kilimanjaro region in order to get rapid information for geostatistical analysis. Partial least square regression with leave one out cross validation is used for model calibration. Results for silt and clay content, as well as carbon and nitrogen content are promising, with adjusted R² ranging from 0.70 for silt to 0.86 for nitrogen. Furthermore models for other nutrients, cation exchange capacity and available water capacity will be calibrated. We compare heterogeneity within and across the different ecosystems and state that spatial structure characteristics and complexity patterns in soil parameters can be quantitatively related to biodiversity and functional diversity parameters.

  16. Soil nutrients influence spatial distributions of tropical tree species

    PubMed Central

    John, Robert; Dalling, James W.; Harms, Kyle E.; Yavitt, Joseph B.; Stallard, Robert F.; Mirabello, Matthew; Hubbell, Stephen P.; Valencia, Renato; Navarrete, Hugo; Vallejo, Martha; Foster, Robin B.

    2007-01-01

    The importance of niche vs. neutral assembly mechanisms in structuring tropical tree communities remains an important unsettled question in community ecology [Bell G (2005) Ecology 86:1757–1770]. There is ample evidence that species distributions are determined by soils and habitat factors at landscape (<104 km2) and regional scales. At local scales (<1 km2), however, habitat factors and species distributions show comparable spatial aggregation, making it difficult to disentangle the importance of niche and dispersal processes. In this article, we test soil resource-based niche assembly at a local scale, using species and soil nutrient distributions obtained at high spatial resolution in three diverse neotropical forest plots in Colombia (La Planada), Ecuador (Yasuni), and Panama (Barro Colorado Island). Using spatial distribution maps of >0.5 million individual trees of 1,400 species and 10 essential plant nutrients, we used Monte Carlo simulations of species distributions to test plant–soil associations against null expectations based on dispersal assembly. We found that the spatial distributions of 36–51% of tree species at these sites show strong associations to soil nutrient distributions. Neutral dispersal assembly cannot account for these plant–soil associations or the observed niche breadths of these species. These results indicate that belowground resource availability plays an important role in the assembly of tropical tree communities at local scales and provide the basis for future investigations on the mechanisms of resource competition among tropical tree species. PMID:17215353

  17. Multi-scale Slip Inversion Based on Simultaneous Spatial and Temporal Domain Wavelet Transform

    NASA Astrophysics Data System (ADS)

    Liu, W.; Yao, H.; Yang, H. Y.

    2017-12-01

    Finite fault inversion is a widely used method to study earthquake rupture processes. Some previous studies have proposed different methods to implement finite fault inversion, including time-domain, frequency-domain, and wavelet-domain methods. Many previous studies have found that different frequency bands show different characteristics of the seismic rupture (e.g., Wang and Mori, 2011; Yao et al., 2011, 2013; Uchide et al., 2013; Yin et al., 2017). Generally, lower frequency waveforms correspond to larger-scale rupture characteristics while higher frequency data are representative of smaller-scale ones. Therefore, multi-scale analysis can help us understand the earthquake rupture process thoroughly from larger scale to smaller scale. By the use of wavelet transform, the wavelet-domain methods can analyze both the time and frequency information of signals in different scales. Traditional wavelet-domain methods (e.g., Ji et al., 2002) implement finite fault inversion with both lower and higher frequency signals together to recover larger-scale and smaller-scale characteristics of the rupture process simultaneously. Here we propose an alternative strategy with a two-step procedure, i.e., firstly constraining the larger-scale characteristics with lower frequency signals, and then resolving the smaller-scale ones with higher frequency signals. We have designed some synthetic tests to testify our strategy and compare it with the traditional one. We also have applied our strategy to study the 2015 Gorkha Nepal earthquake using tele-seismic waveforms. Both the traditional method and our two-step strategy only analyze the data in different temporal scales (i.e., different frequency bands), while the spatial distribution of model parameters also shows multi-scale characteristics. A more sophisticated strategy is to transfer the slip model into different spatial scales, and then analyze the smooth slip distribution (larger scales) with lower frequency data firstly and more detailed slip distribution (smaller scales) with higher frequency data subsequently. We are now implementing the slip inversion using both spatial and temporal domain wavelets. This multi-scale analysis can help us better understand frequency-dependent rupture characteristics of large earthquakes.

  18. Coexistence and relative abundance in plant communities are determined by feedbacks when the scale of feedback and dispersal is local.

    PubMed

    Mack, Keenan M L; Bever, James D

    2014-09-01

    1. Negative plant-soil feedback occurs when the presence of an individual of a particular species at a particular site decreases the relative success of individuals of the same species compared to those other species at that site. This effect favors heterospecifics thereby facilitating coexistence and maintaining diversity. Empirical work has demonstrated that the average strengths of these feedbacks correlate with the relative abundance of species within a community, suggesting that feedbacks are an important driver of plant community composition. Understanding what factors contribute to the generation of this relationship is necessary for diagnosing the dynamic forces that maintain diversity in plant communities. 2. We used a spatially explicit, individual-based computer simulation to test the effects of dispersal distance, the size of feedback neighbourhoods, the strength of pairwise feedbacks and community wide variation of feedbacks, community richness, as well as life-history differences on the dependence of relative abundance on strength of feedback. 3. We found a positive dependence of relative abundance of a species on its average feedback for local scale dispersal and feedback. However, we found that the strength of this dependence decreased as either the spatial scale of dispersal and/or the spatial scale of feedback increased. We also found that for spatially local (i.e. relatively small) scale interaction and dispersal, as the mean strength of feedbacks in the community becomes less negative, the greater the increase in abundance produced by a comparable increase in species-specific average feedback. We found that life-history differences such as mortality rate did not generate a pattern with abundance, nor did they affect the relationship between abundance and average feedback. 4. Synthesis . Our results support the claim that empirical observations of a positive correlation between relative abundance and strength of average feedback serves as evidence that local scale negative feedbacks play a prominent role in structuring plant communities. We also identify that this relationship depends upon local scale plant dispersal and feedback which generates clumping and magnifies the negative feedbacks.

  19. Mercury and methylmercury stream concentrations in a Coastal Plain watershed: a multi-scale simulation analysis.

    PubMed

    Knightes, C D; Golden, H E; Journey, C A; Davis, G M; Conrads, P A; Marvin-DiPasquale, M; Brigham, M E; Bradley, P M

    2014-04-01

    Mercury is a ubiquitous global environmental toxicant responsible for most US fish advisories. Processes governing mercury concentrations in rivers and streams are not well understood, particularly at multiple spatial scales. We investigate how insights gained from reach-scale mercury data and model simulations can be applied at broader watershed scales using a spatially and temporally explicit watershed hydrology and biogeochemical cycling model, VELMA. We simulate fate and transport using reach-scale (0.1 km(2)) study data and evaluate applications to multiple watershed scales. Reach-scale VELMA parameterization was applied to two nested sub-watersheds (28 km(2) and 25 km(2)) and the encompassing watershed (79 km(2)). Results demonstrate that simulated flow and total mercury concentrations compare reasonably to observations at different scales, but simulated methylmercury concentrations are out-of-phase with observations. These findings suggest that intricacies of methylmercury biogeochemical cycling and transport are under-represented in VELMA and underscore the complexity of simulating mercury fate and transport. Published by Elsevier Ltd.

  20. Spatial-temporal consistency between gross primary productivity and solar-induced chlorophyll fluorescence of vegetation in China during 2007-2014.

    PubMed

    Ma, Jun; Xiao, Xiangming; Zhang, Yao; Doughty, Russell; Chen, Bangqian; Zhao, Bin

    2018-10-15

    Accurately estimating spatial-temporal patterns of gross primary production (GPP) is important for the global carbon cycle. Satellite-based light use efficiency (LUE) models are regarded as an efficient tool in simulating spatial-temporal dynamics of GPP. However, the accuracy assessment of GPP simulations from LUE models at both spatial and temporal scales remains a challenge. In this study, we simulated GPP of vegetation in China during 2007-2014 using a LUE model (Vegetation Photosynthesis Model, VPM) based on MODIS (moderate-resolution imaging spectroradiometer) images with 8-day temporal and 500-m spatial resolutions and NCEP (National Center for Environmental Prediction) climate data. Global Ozone Monitoring Instrument 2 (GOME-2) solar-induced chlorophyll fluorescence (SIF) data were used to compare with VPM simulated GPP (GPP VPM ) temporally and spatially using linear correlation analysis. Significant positive linear correlations exist between monthly GPP VPM and SIF data over a single year (2010) and multiple years (2007-2014) in most areas of China. GPP VPM is also significantly positive correlated with GOME-2 SIF (R 2  > 0.43) spatially for seasonal scales. However, poor consistency was detected between GPP VPM and SIF data at yearly scale. GPP dynamic trends have high spatial-temporal variation in China during 2007-2014. Temperature, leaf area index (LAI), and precipitation are the most important factors influence GPP VPM in the regions of East Qinghai-Tibet Plateau, Loss Plateau, and Southwestern China, respectively. The results of this study indicate that GPP VPM is temporally and spatially in line with GOME-2 SIF data, and space-borne SIF data have great potential for evaluating LUE-based GPP models. Copyright © 2018 Elsevier B.V. All rights reserved.

  1. Developing and testing a global-scale regression model to quantify mean annual streamflow

    NASA Astrophysics Data System (ADS)

    Barbarossa, Valerio; Huijbregts, Mark A. J.; Hendriks, A. Jan; Beusen, Arthur H. W.; Clavreul, Julie; King, Henry; Schipper, Aafke M.

    2017-01-01

    Quantifying mean annual flow of rivers (MAF) at ungauged sites is essential for assessments of global water supply, ecosystem integrity and water footprints. MAF can be quantified with spatially explicit process-based models, which might be overly time-consuming and data-intensive for this purpose, or with empirical regression models that predict MAF based on climate and catchment characteristics. Yet, regression models have mostly been developed at a regional scale and the extent to which they can be extrapolated to other regions is not known. In this study, we developed a global-scale regression model for MAF based on a dataset unprecedented in size, using observations of discharge and catchment characteristics from 1885 catchments worldwide, measuring between 2 and 106 km2. In addition, we compared the performance of the regression model with the predictive ability of the spatially explicit global hydrological model PCR-GLOBWB by comparing results from both models to independent measurements. We obtained a regression model explaining 89% of the variance in MAF based on catchment area and catchment averaged mean annual precipitation and air temperature, slope and elevation. The regression model performed better than PCR-GLOBWB for the prediction of MAF, as root-mean-square error (RMSE) values were lower (0.29-0.38 compared to 0.49-0.57) and the modified index of agreement (d) was higher (0.80-0.83 compared to 0.72-0.75). Our regression model can be applied globally to estimate MAF at any point of the river network, thus providing a feasible alternative to spatially explicit process-based global hydrological models.

  2. The assessment of Global Precipitation Measurement estimates over the Indian subcontinent

    NASA Astrophysics Data System (ADS)

    Murali Krishna, U. V.; Das, Subrata Kumar; Deshpande, Sachin M.; Doiphode, S. L.; Pandithurai, G.

    2017-08-01

    Accurate and real-time precipitation estimation is a challenging task for current and future spaceborne measurements, which is essential to understand the global hydrological cycle. Recently, the Global Precipitation Measurement (GPM) satellites were launched as a next-generation rainfall mission for observing the global precipitation characteristics. The purpose of the GPM is to enhance the spatiotemporal resolution of global precipitation. The main objective of the present study is to assess the rainfall products from the GPM, especially the Integrated Multi-satellitE Retrievals for the GPM (IMERG) data by comparing with the ground-based observations. The multitemporal scale evaluations of rainfall involving subdaily, diurnal, monthly, and seasonal scales were performed over the Indian subcontinent. The comparison shows that the IMERG performed better than the Tropical Rainfall Measuring Mission (TRMM)-3B42, although both rainfall products underestimated the observed rainfall compared to the ground-based measurements. The analyses also reveal that the TRMM-3B42 and IMERG data sets are able to represent the large-scale monsoon rainfall spatial features but are having region-specific biases. The IMERG shows significant improvement in low rainfall estimates compared to the TRMM-3B42 for selected regions. In the spatial distribution, the IMERG shows higher rain rates compared to the TRMM-3B42, due to its enhanced spatial and temporal resolutions. Apart from this, the characteristics of raindrop size distribution (DSD) obtained from the GPM mission dual-frequency precipitation radar is assessed over the complex mountain terrain site in the Western Ghats, India, using the DSD measured by a Joss-Waldvogel disdrometer.

  3. A phylogenetic comparative study of flowering phenology along an elevational gradient in the Canadian subarctic.

    PubMed

    Lessard-Therrien, Malie; Davies, T Jonathan; Bolmgren, Kjell

    2014-05-01

    Climate change is affecting high-altitude and high-latitude communities in significant ways. In the short growing season of subarctic habitats, it is essential that the timing and duration of phenological phases match favorable environmental conditions. We explored the time of the first appearance of flowers (first flowering day, FFD) and flowering duration across subarctic species composing different communities, from boreal forest to tundra, along an elevational gradient (600-800 m). The study was conducted on Mount Irony (856 m), North-East Canada (54°90'N, 67°16'W) during summer 2012. First, we quantified phylogenetic signal in FFD at different spatial scales. Second, we used phylogenetic comparative methods to explore the relationship between FFD, flowering duration, and elevation. We found that the phylogenetic signal for FFD was stronger at finer spatial scales and at lower elevations, indicating that closely related species tend to flower at similar times when the local environment is less harsh. The comparatively weaker phylogenetic signal at higher elevation may be indicative of convergent evolution for FFD. Flowering duration was correlated significantly with mean FFD, with later-flowering species having a longer flowering duration, but only at the lowest elevation. Our results indicate significant evolutionary conservatism in responses to phenological cues, but high phenotypic plasticity in flowering times. We suggest that phylogenetic relationships should be considered in the search for predictions and drivers of flowering time in comparative analyses, because species cannot be considered as statistically independent. Further, phenological drivers should be measured at spatial scales such that variation in flowering matches variation in environment.

  4. Catchment-scale Validation of a Physically-based, Post-fire Runoff and Erosion Model

    NASA Astrophysics Data System (ADS)

    Quinn, D.; Brooks, E. S.; Robichaud, P. R.; Dobre, M.; Brown, R. E.; Wagenbrenner, J.

    2017-12-01

    The cascading consequences of fire-induced ecological changes have profound impacts on both natural and managed forest ecosystems. Forest managers tasked with implementing post-fire mitigation strategies need robust tools to evaluate the effectiveness of their decisions, particularly those affecting hydrological recovery. Various hillslope-scale interfaces of the physically-based Water Erosion Prediction Project (WEPP) model have been successfully validated for this purpose using fire-effected plot experiments, however these interfaces are explicitly designed to simulate single hillslopes. Spatially-distributed, catchment-scale WEPP interfaces have been developed over the past decade, however none have been validated for post-fire simulations, posing a barrier to adoption for forest managers. In this validation study, we compare WEPP simulations with pre- and post-fire hydrological records for three forested catchments (W. Willow, N. Thomas, and S. Thomas) that burned in the 2011 Wallow Fire in Northeastern Arizona, USA. Simulations were conducted using two approaches; the first using automatically created inputs from an online, spatial, post-fire WEPP interface, and the second using manually created inputs which incorporate the spatial variability of fire effects observed in the field. Both approaches were compared to five years of observed post-fire sediment and flow data to assess goodness of fit.

  5. A Local to National Scale Catchment Model Simulation Framework for Hydrological Predictions and Impact Assessments Under Uncertainty

    NASA Astrophysics Data System (ADS)

    Freer, Jim; Coxon, Gemma; Quinn, Niall; Dunne, Toby; Lane, Rosie; Bates, Paul; Wagener, Thorsten; Woods, Ross; Neal, Jeff; Howden, Nicholas; Musuuza, Jude

    2017-04-01

    There is a huge challenge in developing hydrological model structures that can be used for hypothesis testing, prediction, impact assessment and risk analyses over a wide range of spatial scales. There are many reasons why this is the case, from computational demands, to how we define and characterize different features and pathway connectivities in the landscape, that differ depending on the objectives of the study. However there is certainly a need more than ever to explore the trade-offs between the complexity of modelling applied (i.e. spatial discretization, levels of process representation, complexity of landscape representation) compared to the benefits realized in terms of predictive capability and robustness of these predictions during hydrological extremes and during change. Furthermore, there is a further balance, particularly associated with prediction uncertainties, in that it is not desirable to have modelling systems that are too complex compared to the observed data that would ever be available to apply them. This is particularly the case when models are applied to quantify national impact assessments, especially if these are based on validation assessments from smaller more detailed case studies. Therefore the hydrological community needs modelling tools and approaches that enable these trade-offs to be explored and to understand the level of representation needed in models to be 'fit-for-purpose' for a given application. This paper presents a catchment scale national modelling framework based on Dynamic-TOPMODEL specifically setup to fulfil these aims. A key component of the modelling framework is it's structural flexibility, as is the ability to assess model outputs using Monte Carlo simulation techniques. The model build has been automated to work at any spatial scale to the national scale, and within that to control the level of spatial discretisation and connectivity of locally accounted landscape elements in the form of hydrological response units (HRU's). This allows for the explicit consideration of spatial rainfall fields, landscape, soils and geological attributes and the spatial connectivity of hydrological flow pathways to explore what level of modelling complexity we need for different prediction problems. We shall present this framework and show how it can be used in flood and drought risk analyses as well as include attributes and features within the landscape to explore societal and climate impacts effectively within an uncertainty analyses framework.

  6. Precipitation data in a mountainous catchment in Honduras: quality assessment and spatiotemporal characteristics

    NASA Astrophysics Data System (ADS)

    Westerberg, I.; Walther, A.; Guerrero, J.-L.; Coello, Z.; Halldin, S.; Xu, C.-Y.; Chen, D.; Lundin, L.-C.

    2010-08-01

    An accurate description of temporal and spatial precipitation variability in Central America is important for local farming, water supply and flood management. Data quality problems and lack of consistent precipitation data impede hydrometeorological analysis in the 7,500 km2 Choluteca River basin in central Honduras, encompassing the capital Tegucigalpa. We used precipitation data from 60 daily and 13 monthly stations in 1913-2006 from five local authorities and NOAA's Global Historical Climatology Network. Quality control routines were developed to tackle the specific data quality problems. The quality-controlled data were characterised spatially and temporally, and compared with regional and larger-scale studies. Two gap-filling methods for daily data and three interpolation methods for monthly and mean annual precipitation were compared. The coefficient-of-correlation-weighting method provided the best results for gap-filling and the universal kriging method for spatial interpolation. In-homogeneity in the time series was the main quality problem, and 22% of the daily precipitation data were too poor to be used. Spatial autocorrelation for monthly precipitation was low during the dry season, and correlation increased markedly when data were temporally aggregated from a daily time scale to 4-5 days. The analysis manifested the high spatial and temporal variability caused by the diverse precipitation-generating mechanisms and the need for an improved monitoring network.

  7. A spatial method to calculate small-scale fisheries effort in data poor scenarios.

    PubMed

    Johnson, Andrew Frederick; Moreno-Báez, Marcia; Giron-Nava, Alfredo; Corominas, Julia; Erisman, Brad; Ezcurra, Exequiel; Aburto-Oropeza, Octavio

    2017-01-01

    To gauge the collateral impacts of fishing we must know where fishing boats operate and how much they fish. Although small-scale fisheries land approximately the same amount of fish for human consumption as industrial fleets globally, methods of estimating their fishing effort are comparatively poor. We present an accessible, spatial method of calculating the effort of small-scale fisheries based on two simple measures that are available, or at least easily estimated, in even the most data-poor fisheries: the number of boats and the local coastal human population. We illustrate the method using a small-scale fisheries case study from the Gulf of California, Mexico, and show that our measure of Predicted Fishing Effort (PFE), measured as the number of boats operating in a given area per day adjusted by the number of people in local coastal populations, can accurately predict fisheries landings in the Gulf. Comparing our values of PFE to commercial fishery landings throughout the Gulf also indicates that the current number of small-scale fishing boats in the Gulf is approximately double what is required to land theoretical maximum fish biomass. Our method is fishery-type independent and can be used to quantitatively evaluate the efficacy of growth in small-scale fisheries. This new method provides an important first step towards estimating the fishing effort of small-scale fleets globally.

  8. Modern Climate Analogues of Late-Quaternary Paleoclimates for the Western United States.

    NASA Astrophysics Data System (ADS)

    Mock, Cary Jeffrey

    This study examined spatial variations of modern and late-Quaternary climates for the western United States. Synoptic climatological analyses of the modern record identified the predominate climatic controls that normally produce the principal modes of spatial climatic variability. They also provided a modern standard to assess past climates. Maps of the month-to-month changes in 500 mb heights, sea-level pressure, temperature, and precipitation illustrated how different climatic controls govern the annual cycle of climatic response. The patterns of precipitation ratios, precipitation bar graphs, and the seasonal precipitation maximum provided additional insight into how different climatic controls influence spatial climatic variations. Synoptic-scale patterns from general circulation model (GCM) simulations or from analyses of climatic indices were used as the basis for finding modern climate analogues for 18 ka and 9 ka. Composite anomaly maps of atmospheric circulation, precipitation, and temperature were compared with effective moisture maps compiled from proxy data to infer how the patterns, which were evident from the proxy data, were generated. The analyses of the modern synoptic climatology indicate that smaller-scale climatic controls must be considered along with larger-scale ones in order to explain patterns of spatial climate heterogeneity. Climatic extremes indicate that changes in the spatial patterns of precipitation seasonality are the exception rather than the rule, reflecting the strong influence of smaller-scale controls. Modern climate analogues for both 18 ka and 9 ka clearly depict the dry Northwest/wet Southwest contrast that is suggested by GCM simulations and paleoclimatic evidence. 18 ka analogues also show the importance of smaller-scale climatic controls in explaining spatial climatic variation in the Northwest and northern Great Plains. 9 ka analogues provide climatological explanations for patterns of spatial heterogeneity over several mountainous areas as suggested by paleoclimatic evidence. Modern analogues of past climates supplement modeling approaches by providing information below the resolution of model simulations. Analogues can be used to examine the controls of spatial paleoclimatic variation if sufficient instrumental data and paleoclimatic evidence are available, and if one carefully exercises uniformitarianism when extrapolating modern relationships to the past.

  9. Scaling impacts on environmental controls and spatial heterogeneity of soil organic carbon stocks

    NASA Astrophysics Data System (ADS)

    Mishra, U.; Riley, W. J.

    2015-01-01

    The spatial heterogeneity of land surfaces affects energy, moisture, and greenhouse gas exchanges with the atmosphere. However, representing heterogeneity of terrestrial hydrological and biogeochemical processes in earth system models (ESMs) remains a critical scientific challenge. We report the impact of spatial scaling on environmental controls, spatial structure, and statistical properties of soil organic carbon (SOC) stocks across the US state of Alaska. We used soil profile observations and environmental factors such as topography, climate, land cover types, and surficial geology to predict the SOC stocks at a 50 m spatial scale. These spatially heterogeneous estimates provide a dataset with reasonable fidelity to the observations at a sufficiently high resolution to examine the environmental controls on the spatial structure of SOC stocks. We upscaled both the predicted SOC stocks and environmental variables from finer to coarser spatial scales (s = 100, 200, 500 m, 1, 2, 5, 10 km) and generated various statistical properties of SOC stock estimates. We found different environmental factors to be statistically significant predictors at different spatial scales. Only elevation, temperature, potential evapotranspiration, and scrub land cover types were significant predictors at all scales. The strengths of control (the median value of geographically weighted regression coefficients) of these four environmental variables on SOC stocks decreased with increasing scale and were accurately represented using mathematical functions (R2 = 0.83-0.97). The spatial structure of SOC stocks across Alaska changed with spatial scale. Although the variance (sill) and unstructured variability (nugget) of the calculated variograms of SOC stocks decreased exponentially with scale, the correlation length (range) remained relatively constant across scale. The variance of predicted SOC stocks decreased with spatial scale over the range of 50 to ~ 500 m, and remained constant beyond this scale. The fitted exponential function accounted for 98% of variability in the variance of SOC stocks. We found moderately-accurate linear relationships between mean and higher-order moments of predicted SOC stocks (R2 ~ 0.55-0.63). Current ESMs operate at coarse spatial scales (50-100 km), and are therefore unable to represent environmental controllers and spatial heterogeneity of high-latitude SOC stocks consistent with observations. We conclude that improved understanding of the scaling behavior of environmental controls and statistical properties of SOC stocks can improve ESM land model benchmarking and perhaps allow representation of spatial heterogeneity of biogeochemistry at scales finer than those currently resolved by ESMs.

  10. Scaling impacts on environmental controls and spatial heterogeneity of soil organic carbon stocks

    NASA Astrophysics Data System (ADS)

    Mishra, U.; Riley, W. J.

    2015-07-01

    The spatial heterogeneity of land surfaces affects energy, moisture, and greenhouse gas exchanges with the atmosphere. However, representing the heterogeneity of terrestrial hydrological and biogeochemical processes in Earth system models (ESMs) remains a critical scientific challenge. We report the impact of spatial scaling on environmental controls, spatial structure, and statistical properties of soil organic carbon (SOC) stocks across the US state of Alaska. We used soil profile observations and environmental factors such as topography, climate, land cover types, and surficial geology to predict the SOC stocks at a 50 m spatial scale. These spatially heterogeneous estimates provide a data set with reasonable fidelity to the observations at a sufficiently high resolution to examine the environmental controls on the spatial structure of SOC stocks. We upscaled both the predicted SOC stocks and environmental variables from finer to coarser spatial scales (s = 100, 200, and 500 m and 1, 2, 5, and 10 km) and generated various statistical properties of SOC stock estimates. We found different environmental factors to be statistically significant predictors at different spatial scales. Only elevation, temperature, potential evapotranspiration, and scrub land cover types were significant predictors at all scales. The strengths of control (the median value of geographically weighted regression coefficients) of these four environmental variables on SOC stocks decreased with increasing scale and were accurately represented using mathematical functions (R2 = 0.83-0.97). The spatial structure of SOC stocks across Alaska changed with spatial scale. Although the variance (sill) and unstructured variability (nugget) of the calculated variograms of SOC stocks decreased exponentially with scale, the correlation length (range) remained relatively constant across scale. The variance of predicted SOC stocks decreased with spatial scale over the range of 50 m to ~ 500 m, and remained constant beyond this scale. The fitted exponential function accounted for 98 % of variability in the variance of SOC stocks. We found moderately accurate linear relationships between mean and higher-order moments of predicted SOC stocks (R2 ∼ 0.55-0.63). Current ESMs operate at coarse spatial scales (50-100 km), and are therefore unable to represent environmental controllers and spatial heterogeneity of high-latitude SOC stocks consistent with observations. We conclude that improved understanding of the scaling behavior of environmental controls and statistical properties of SOC stocks could improve ESM land model benchmarking and perhaps allow representation of spatial heterogeneity of biogeochemistry at scales finer than those currently resolved by ESMs.

  11. Scaling impacts on environmental controls and spatial heterogeneity of soil organic carbon stocks

    DOE PAGES

    Mishra, U.; Riley, W. J.

    2015-07-02

    The spatial heterogeneity of land surfaces affects energy, moisture, and greenhouse gas exchanges with the atmosphere. However, representing the heterogeneity of terrestrial hydrological and biogeochemical processes in Earth system models (ESMs) remains a critical scientific challenge. We report the impact of spatial scaling on environmental controls, spatial structure, and statistical properties of soil organic carbon (SOC) stocks across the US state of Alaska. We used soil profile observations and environmental factors such as topography, climate, land cover types, and surficial geology to predict the SOC stocks at a 50 m spatial scale. These spatially heterogeneous estimates provide a data setmore » with reasonable fidelity to the observations at a sufficiently high resolution to examine the environmental controls on the spatial structure of SOC stocks. We upscaled both the predicted SOC stocks and environmental variables from finer to coarser spatial scales ( s = 100, 200, and 500 m and 1, 2, 5, and 10 km) and generated various statistical properties of SOC stock estimates. We found different environmental factors to be statistically significant predictors at different spatial scales. Only elevation, temperature, potential evapotranspiration, and scrub land cover types were significant predictors at all scales. The strengths of control (the median value of geographically weighted regression coefficients) of these four environmental variables on SOC stocks decreased with increasing scale and were accurately represented using mathematical functions ( R 2 = 0.83–0.97). The spatial structure of SOC stocks across Alaska changed with spatial scale. Although the variance (sill) and unstructured variability (nugget) of the calculated variograms of SOC stocks decreased exponentially with scale, the correlation length (range) remained relatively constant across scale. The variance of predicted SOC stocks decreased with spatial scale over the range of 50 m to ~ 500 m, and remained constant beyond this scale. The fitted exponential function accounted for 98 % of variability in the variance of SOC stocks. We found moderately accurate linear relationships between mean and higher-order moments of predicted SOC stocks ( R 2 ∼ 0.55–0.63). Current ESMs operate at coarse spatial scales (50–100 km), and are therefore unable to represent environmental controllers and spatial heterogeneity of high-latitude SOC stocks consistent with observations. We conclude that improved understanding of the scaling behavior of environmental controls and statistical properties of SOC stocks could improve ESM land model benchmarking and perhaps allow representation of spatial heterogeneity of biogeochemistry at scales finer than those currently resolved by ESMs.« less

  12. Scaling impacts on environmental controls and spatial heterogeneity of soil organic carbon stocks

    DOE PAGES

    Mishra, U.; Riley, W. J.

    2015-01-01

    The spatial heterogeneity of land surfaces affects energy, moisture, and greenhouse gas exchanges with the atmosphere. However, representing heterogeneity of terrestrial hydrological and biogeochemical processes in earth system models (ESMs) remains a critical scientific challenge. We report the impact of spatial scaling on environmental controls, spatial structure, and statistical properties of soil organic carbon (SOC) stocks across the US state of Alaska. We used soil profile observations and environmental factors such as topography, climate, land cover types, and surficial geology to predict the SOC stocks at a 50 m spatial scale. These spatially heterogeneous estimates provide a dataset with reasonablemore » fidelity to the observations at a sufficiently high resolution to examine the environmental controls on the spatial structure of SOC stocks. We upscaled both the predicted SOC stocks and environmental variables from finer to coarser spatial scales ( s = 100, 200, 500 m, 1, 2, 5, 10 km) and generated various statistical properties of SOC stock estimates. We found different environmental factors to be statistically significant predictors at different spatial scales. Only elevation, temperature, potential evapotranspiration, and scrub land cover types were significant predictors at all scales. The strengths of control (the median value of geographically weighted regression coefficients) of these four environmental variables on SOC stocks decreased with increasing scale and were accurately represented using mathematical functions ( R 2 = 0.83–0.97). The spatial structure of SOC stocks across Alaska changed with spatial scale. Although the variance (sill) and unstructured variability (nugget) of the calculated variograms of SOC stocks decreased exponentially with scale, the correlation length (range) remained relatively constant across scale. The variance of predicted SOC stocks decreased with spatial scale over the range of 50 to ~ 500 m, and remained constant beyond this scale. The fitted exponential function accounted for 98% of variability in the variance of SOC stocks. We found moderately-accurate linear relationships between mean and higher-order moments of predicted SOC stocks ( R 2 ~ 0.55–0.63). Current ESMs operate at coarse spatial scales (50–100 km), and are therefore unable to represent environmental controllers and spatial heterogeneity of high-latitude SOC stocks consistent with observations. We conclude that improved understanding of the scaling behavior of environmental controls and statistical properties of SOC stocks can improve ESM land model benchmarking and perhaps allow representation of spatial heterogeneity of biogeochemistry at scales finer than those currently resolved by ESMs.« less

  13. Spatial ecology of refuge selection by an herbivore under risk of predation

    USGS Publications Warehouse

    Wilson, Tammy L.; Rayburn, Andrew P.; Edwards, Thomas C.

    2012-01-01

    Prey species use structures such as burrows to minimize predation risk. The spatial arrangement of these resources can have important implications for individual and population fitness. For example, there is evidence that clustered resources can benefit individuals by reducing predation risk and increasing foraging opportunity concurrently, which leads to higher population density. However, the scale of clustering that is important in these processes has been ignored during theoretical and empirical development of resource models. Ecological understanding of refuge exploitation by prey can be improved by spatial analysis of refuge use and availability that incorporates the effect of scale. We measured the spatial distribution of pygmy rabbit (Brachylagus idahoensis) refugia (burrows) through censuses in four 6-ha sites. Point pattern analyses were used to evaluate burrow selection by comparing the spatial distribution of used and available burrows. The presence of food resources and additional overstory cover resources was further examined using logistic regression. Burrows were spatially clustered at scales up to approximately 25 m, and then regularly spaced at distances beyond ~40 m. Pygmy rabbit exploitation of burrows did not match availability. Burrows used by pygmy rabbits were likely to be located in areas with high overall burrow density (resource clusters) and high overstory cover, which together minimized predation risk. However, in some cases we observed an interaction between either overstory cover (safety) or understory cover (forage) and burrow density. The interactions show that pygmy rabbits will use burrows in areas with low relative burrow density (high relative predation risk) if understory food resources are high. This points to a potential trade-off whereby rabbits must sacrifice some safety afforded by additional nearby burrows to obtain ample forage resources. Observed patterns of clustered burrows and non-random burrow use improve understanding of the importance of spatial distribution of refugia for burrowing herbivores. The analyses used allowed for the estimation of the spatial scale where subtle trade-offs between predation avoidance and foraging opportunity are likely to occur in a natural system.

  14. Characterizing riverbed sediment using high-frequency acoustics 1: spectral properties of scattering

    USGS Publications Warehouse

    Buscombe, Daniel D.; Grams, Paul E.; Kaplinski, Matt A.

    2014-01-01

    Bed-sediment classification using high-frequency hydro-acoustic instruments is challenging when sediments are spatially heterogeneous, which is often the case in rivers. The use of acoustic backscatter to classify sediments is an attractive alternative to analysis of topography because it is potentially sensitive to grain-scale roughness. Here, a new method is presented which uses high-frequency acoustic backscatter from multibeam sonar to classify heterogeneous riverbed sediments by type (sand, gravel,rock) continuously in space and at small spatial resolution. In this, the first of a pair of papers that examine the scattering signatures from a heterogeneous riverbed, methods are presented to construct spatially explicit maps of spectral properties from geo-referenced point clouds of geometrically and radiometrically corrected echoes. Backscatter power spectra are computed to produce scale and amplitude metrics that collectively characterize the length scales of stochastic measures of riverbed scattering, termed ‘stochastic geometries’. Backscatter aggregated over small spatial scales have spectra that obey a power-law. This apparently self-affine behavior could instead arise from morphological- and grain-scale roughnesses over multiple overlapping scales, or riverbed scattering being transitional between Rayleigh and geometric regimes. Relationships exist between stochastic geometries of backscatter and areas of rough and smooth sediments. However, no one parameter can uniquely characterize a particular substrate, nor definitively separate the relative contributions of roughness and acoustic impedance (hardness). Combinations of spectral quantities do, however, have the potential to delineate riverbed sediment patchiness, in a data-driven approach comparing backscatter with bed-sediment observations (which is the subject of part two of this manuscript).

  15. The spatiotemporal association of non-prescription retail sales with cases during the 2009 influenza pandemic in Great Britain.

    PubMed

    Todd, Stacy; Diggle, Peter J; White, Peter J; Fearne, Andrew; Read, Jonathan M

    2014-04-29

    To assess whether retail sales of non-prescription products can be used for syndromic surveillance and whether it can detect influenza activity at different spatial scales. A secondary objective was to assess whether changes in purchasing behaviour were related to public health advice or levels of media or public interest. The UK. National and regional influenza case estimates and retail sales from a major British supermarket. Weekly, seasonally adjusted sales of over-the-counter symptom remedies and non-pharmaceutical products; recommended as part of the advice offered by public health agencies; were compared with weekly influenza case estimates. Comparisons were made at national and regional spatial resolutions. We also compared sales to national measures of contemporaneous media output and public interest (Internet search volume) related to the pandemic. At a national scale there was no significant correlation between retail sales of symptom remedies and cases for the whole pandemic period in 2009. At the regional scale, a minority of regions showed statistically significant positive correlations between cases and sales of adult 'cold and flu' remedies and cough remedies (3.2%, 5/156, 3.8%, 6/156), but a greater number of regions showed a significant positive correlation between cases and symptomatic remedies for children (35.6%, 55/156). Significant positive correlations between cases and sales of thermometers and antiviral hand gels/wash were seen at both spatial scales (Cor 0.477 (95% CI 0.171 to 0.699); 0.711 (95% CI 0.495 to 0.844)). We found no significant association between retail sales and media reporting or Internet search volume. This study provides evidence that the British public responded appropriately to health messaging about hygiene. Non-prescription retail sales at a national level are not useful for the detection of cases. However, at finer spatial scales, in particular age-groups, retail sales may help augment existing surveillance and merit further study.

  16. The spatiotemporal association of non-prescription retail sales with cases during the 2009 influenza pandemic in Great Britain

    PubMed Central

    Todd, Stacy; Diggle, Peter J; White, Peter J; Fearne, Andrew; Read, Jonathan M

    2014-01-01

    Objective To assess whether retail sales of non-prescription products can be used for syndromic surveillance and whether it can detect influenza activity at different spatial scales. A secondary objective was to assess whether changes in purchasing behaviour were related to public health advice or levels of media or public interest. Setting The UK. Participants National and regional influenza case estimates and retail sales from a major British supermarket. Outcome measures Weekly, seasonally adjusted sales of over-the-counter symptom remedies and non-pharmaceutical products; recommended as part of the advice offered by public health agencies; were compared with weekly influenza case estimates. Comparisons were made at national and regional spatial resolutions. We also compared sales to national measures of contemporaneous media output and public interest (Internet search volume) related to the pandemic. Results At a national scale there was no significant correlation between retail sales of symptom remedies and cases for the whole pandemic period in 2009. At the regional scale, a minority of regions showed statistically significant positive correlations between cases and sales of adult ‘cold and flu’ remedies and cough remedies (3.2%, 5/156, 3.8%, 6/156), but a greater number of regions showed a significant positive correlation between cases and symptomatic remedies for children (35.6%, 55/156). Significant positive correlations between cases and sales of thermometers and antiviral hand gels/wash were seen at both spatial scales (Cor 0.477 (95% CI 0.171 to 0.699); 0.711 (95% CI 0.495 to 0.844)). We found no significant association between retail sales and media reporting or Internet search volume. Conclusions This study provides evidence that the British public responded appropriately to health messaging about hygiene. Non-prescription retail sales at a national level are not useful for the detection of cases. However, at finer spatial scales, in particular age-groups, retail sales may help augment existing surveillance and merit further study. PMID:24780494

  17. Integration of soil moisture and geophysical datasets for improved water resource management in irrigated systems

    NASA Astrophysics Data System (ADS)

    Finkenbiner, Catherine; Franz, Trenton E.; Avery, William Alexander; Heeren, Derek M.

    2016-04-01

    Global trends in consumptive water use indicate a growing and unsustainable reliance on water resources. Approximately 40% of total food production originates from irrigated agriculture. With increasing crop yield demands, water use efficiency must increase to maintain a stable food and water trade. This work aims to increase our understanding of soil hydrologic fluxes at intermediate spatial scales. Fixed and roving cosmic-ray neutron probes were combined in order to characterize the spatial and temporal patterns of soil moisture at three study sites across an East-West precipitation gradient in the state of Nebraska, USA. A coarse scale map was generated for the entire domain (122 km2) at each study site. We used a simplistic data merging technique to produce a statistical daily soil moisture product at a range of key spatial scales in support of current irrigation technologies: the individual sprinkler (˜102m2) for variable rate irrigation, the individual wedge (˜103m2) for variable speed irrigation, and the quarter section (0.82 km2) for uniform rate irrigation. Additionally, we were able to generate a daily soil moisture product over the entire study area at various key modeling and remote sensing scales 12, 32, and 122 km2. Our soil moisture products and derived soil properties were then compared against spatial datasets (i.e. field capacity and wilting point) from the US Department of Agriculture Web Soil Survey. The results show that our "observed" field capacity was higher compared to the Web Soil Survey products. We hypothesize that our results, when provided to irrigators, will decrease water losses due to runoff and deep percolation as sprinkler managers can better estimate irrigation application depth and times in relation to soil moisture depletion below field capacity and above maximum allowable depletion. The incorporation of this non-contact and pragmatic geophysical method into current irrigation practices across the state and globe has the potential to greatly increase agricultural water use efficiency at scale.

  18. Comparing three sampling techniques for estimating fine woody down dead biomass

    Treesearch

    Robert E. Keane; Kathy Gray

    2013-01-01

    Designing woody fuel sampling methods that quickly, accurately and efficiently assess biomass at relevant spatial scales requires extensive knowledge of each sampling method's strengths, weaknesses and tradeoffs. In this study, we compared various modifications of three common sampling methods (planar intercept, fixed-area microplot and photoload) for estimating...

  19. Spatial feature analysis of a cosmic-ray sensor for measuring the soil water content: Comparison of four weighting methods

    NASA Astrophysics Data System (ADS)

    Cai, Jingya; Pang, Zhiguo; Fu, Jun'e.

    2018-04-01

    To quantitatively analyze the spatial features of a cosmic-ray sensor (CRS) (i.e., the measurement support volume of the CRS and the weight of the in situ point-scale soil water content (SWC) in terms of the regionally averaged SWC derived from the CRS) in measuring the SWC, cooperative observations based on CRS, oven drying and frequency domain reflectometry (FDR) methods are performed at the point and regional scales in a desert steppe area of the Inner Mongolia Autonomous Region. This region is flat with sparse vegetation cover consisting of only grass, thereby minimizing the effects of terrain and vegetation. Considering the two possibilities of the measurement support volume of the CRS, the results of four weighting methods are compared with the SWC monitored by FDR within an appropriate measurement support volume. The weighted average calculated using the neutron intensity-based weighting method (Ni weighting method) best fits the regionally averaged SWC measured by the CRS. Therefore, we conclude that the gyroscopic support volume and the weights determined by the Ni weighting method are the closest to the actual spatial features of the CRS when measuring the SWC. Based on these findings, a scale transformation model of the SWC from the point scale to the scale of the CRS measurement support volume is established. In addition, the spatial features simulated using the Ni weighting method are visualized by developing a software system.

  20. Variation in soil carbon dioxide efflux at two spatial scales in a topographically complex boreal forest

    USGS Publications Warehouse

    Kelsey, Katharine C.; Wickland, Kimberly P.; Striegl, Robert G.; Neff, Jason C.

    2012-01-01

    Carbon dynamics of high-latitude regions are an important and highly uncertain component of global carbon budgets, and efforts to constrain estimates of soil-atmosphere carbon exchange in these regions are contingent on accurate representations of spatial and temporal variability in carbon fluxes. This study explores spatial and temporal variability in soilatmosphere carbon dynamics at both fine and coarse spatial scales in a high-elevation, permafrost-dominated boreal black spruce forest. We evaluate the importance of landscape-level investigations of soil-atmosphere carbon dynamics by characterizing seasonal trends in soil-atmosphere carbon exchange, describing soil temperature-moisture-respiration relations, and quantifying temporal and spatial variability at two spatial scales: the plot scale (0–5 m) and the landscape scale (500–1000 m). Plot-scale spatial variability (average variation on a given measurement day) in soil CO2 efflux ranged from a coefficient of variation (CV) of 0.25 to 0.69, and plot-scale temporal variability (average variation of plots across measurement days) in efflux ranged from a CV of 0.19 to 0.36. Landscape-scale spatial and temporal variability in efflux was represented by a CV of 0.40 and 0.31, respectively, indicating that plot-scale spatial variability in soil respiration is as great as landscape-scale spatial variability at this site. While soil respiration was related to soil temperature at both the plot- and landscape scale, landscape-level descriptions of soil moisture were necessary to define soil respiration-moisture relations. Soil moisture variability was also integral to explaining temporal variability in soil respiration. Our results have important implications for research efforts in high-latitude regions where remote study sites make landscape-scale field campaigns challenging.

  1. Spatial variability of intake fractions for Canadian emission scenarios: a comparison between three resolution scales.

    PubMed

    Manneh, Rima; Margni, Manuele; Deschênes, Louise

    2010-06-01

    Spatially differentiated intake fractions (iFs) linked to Canadian emissions of toxic organic chemicals were developed using the multimedia and multipathways fate and exposure model IMPACT 2002. The fate and exposure of chemicals released to the Canadian environment were modeled with a single regional mass-balance model and three models that provided multiple mass-balance regions within Canada. These three models were based on the Canadian subwatersheds (172 zones), ecozones (15 zones), and provinces (13 zones). Releases of 32 organic chemicals into water and air were considered. This was done in order to (i) assess and compare the spatial variability of iFs within and across the three levels of regionalization and (ii) compare the spatial iFs to nonspatial ones. Results showed that iFs calculated using the subwatershed resolution presented a higher spatial variability (up to 10 orders of magnitude for emissions into water) than the ones based on the ecozones and provinces, implying that higher spatial resolution could potentially reduce uncertainty in iFs and, therefore, increase the discriminating power when assessing and comparing toxic releases for known emission locations. Results also indicated that, for an unknown emission location, a model with high spatial resolution such as the subwatershed model could significantly improve the accuracy of a generic iF. Population weighted iFs span up to 3 orders of magnitude compared to nonspatial iFs calculated by the one-box model. Less significant differences were observed when comparing spatial versus nonspatial iFs from the ecozones and provinces, respectively.

  2. Multi-scale geophysical study to model the distribution and development of fractures in relation to the knickpoint in the Luquillo Critical Zone Observatory (Puerto Rico)

    NASA Astrophysics Data System (ADS)

    Comas, X.; Wright, W. J.; Hynek, S. A.; Ntarlagiannis, D.; Terry, N.; Job, M. J.; Fletcher, R. C.; Brantley, S.

    2017-12-01

    Previous studies in the Rio Icacos watershed in the Luquillo Mountains (Puerto Rico) have shown that regolith materials are rapidly developed from the alteration of quartz diorite bedrock, and create a blanket on top of the bedrock with a thickness that decreases with proximity to the knickpoint. The watershed is also characterized by a system of heterogeneous fractures that likely drive bedrock weathering and the formation of corestones and associated spheroidal fracturing and rindlets. Previous efforts to characterize the spatial distribution of fractures were based on aerial images that did not account for the architecture of the critical zone below the subsurface. In this study we use an array of near-surface geophysical methods at multiple scales to better understand how the spatial distribution and density of fractures varies with topography and proximity to the knickpoint. Large km-scale surveys using ground penetrating radar (GPR), terrain conductivity, and capacitively coupled resistivity, were combined with smaller scale surveys (10-100 m) using electrical resistivity imaging (ERI), and shallow seismics, and were directly constrained with boreholes from previous studies. Geophysical results were compared to theoretical models of compressive stress as due to gravity and regional compression, and showed consistency at describing increased dilation of fractures with proximity to the knickpoint. This study shows the potential of multidisciplinary approaches to model critical zone processes at multiple scales of measurement and high spatial resolution. The approach can be particularly efficient at large km-scales when applying geophysical methods that allow for rapid data acquisition (i.e. walking pace) at high spatial resolution (i.e. cm scales).

  3. Fine-Scale Mapping by Spatial Risk Distribution Modeling for Regional Malaria Endemicity and Its Implications under the Low-to-Moderate Transmission Setting in Western Cambodia

    PubMed Central

    Okami, Suguru; Kohtake, Naohiko

    2016-01-01

    The disease burden of malaria has decreased as malaria elimination efforts progress. The mapping approach that uses spatial risk distribution modeling needs some adjustment and reinvestigation in accordance with situational changes. Here we applied a mathematical modeling approach for standardized morbidity ratio (SMR) calculated by annual parasite incidence using routinely aggregated surveillance reports, environmental data such as remote sensing data, and non-environmental anthropogenic data to create fine-scale spatial risk distribution maps of western Cambodia. Furthermore, we incorporated a combination of containment status indicators into the model to demonstrate spatial heterogeneities of the relationship between containment status and risks. The explanatory model was fitted to estimate the SMR of each area (adjusted Pearson correlation coefficient R2 = 0.774; Akaike information criterion AIC = 149.423). A Bayesian modeling framework was applied to estimate the uncertainty of the model and cross-scale predictions. Fine-scale maps were created by the spatial interpolation of estimated SMRs at each village. Compared with geocoded case data, corresponding predicted values showed conformity [Spearman’s rank correlation r = 0.662 in the inverse distance weighed interpolation and 0.645 in ordinal kriging (95% confidence intervals of 0.414–0.827 and 0.368–0.813, respectively), Welch’s t-test; Not significant]. The proposed approach successfully explained regional malaria risks and fine-scale risk maps were created under low-to-moderate malaria transmission settings where reinvestigations of existing risk modeling approaches were needed. Moreover, different representations of simulated outcomes of containment status indicators for respective areas provided useful insights for tailored interventional planning, considering regional malaria endemicity. PMID:27415623

  4. Spatio-temporal correlations in the Manna model in one, three and five dimensions

    NASA Astrophysics Data System (ADS)

    Willis, Gary; Pruessner, Gunnar

    2018-02-01

    Although the paradigm of criticality is centered around spatial correlations and their anomalous scaling, not many studies of self-organized criticality (SOC) focus on spatial correlations. Often, integrated observables, such as avalanche size and duration, are used, not least as to avoid complications due to the unavoidable lack of translational invariance. The present work is a survey of spatio-temporal correlation functions in the Manna Model of SOC, measured numerically in detail in d = 1,3 and 5 dimensions and compared to theoretical results, in particular relating them to “integrated” observables such as avalanche size and duration scaling, that measure them indirectly. Contrary to the notion held by some of SOC models organizing into a critical state by re-arranging their spatial structure avalanche by avalanche, which may be expected to result in large, nontrivial, system-spanning spatial correlations in the quiescent state (between avalanches), correlations of inactive particles in the quiescent state have a small amplitude that does not and cannot increase with the system size, although they display (noisy) power law scaling over a range linear in the system size. Self-organization, however, does take place as the (one-point) density of inactive particles organizes into a particular profile that is asymptotically independent of the driving location, also demonstrated analytically in one dimension. Activity and its correlations, on the other hand, display nontrivial long-ranged spatio-temporal scaling with exponents that can be related to established results, in particular avalanche size and duration exponents. The correlation length and amplitude are set by the system size (confirmed analytically for some observables), as expected in systems displaying finite size scaling. In one dimension, we find some surprising inconsistencies of the dynamical exponent. A (spatially extended) mean field theory (MFT) is recovered, with some corrections, in five dimensions.

  5. Technical Note: Atmospheric CO2 inversions on the mesoscale using data-driven prior uncertainties: methodology and system evaluation

    NASA Astrophysics Data System (ADS)

    Kountouris, Panagiotis; Gerbig, Christoph; Rödenbeck, Christian; Karstens, Ute; Koch, Thomas Frank; Heimann, Martin

    2018-03-01

    Atmospheric inversions are widely used in the optimization of surface carbon fluxes on a regional scale using information from atmospheric CO2 dry mole fractions. In many studies the prior flux uncertainty applied to the inversion schemes does not directly reflect the true flux uncertainties but is used to regularize the inverse problem. Here, we aim to implement an inversion scheme using the Jena inversion system and applying a prior flux error structure derived from a model-data residual analysis using high spatial and temporal resolution over a full year period in the European domain. We analyzed the performance of the inversion system with a synthetic experiment, in which the flux constraint is derived following the same residual analysis but applied to the model-model mismatch. The synthetic study showed a quite good agreement between posterior and true fluxes on European, country, annual and monthly scales. Posterior monthly and country-aggregated fluxes improved their correlation coefficient with the known truth by 7 % compared to the prior estimates when compared to the reference, with a mean correlation of 0.92. The ratio of the SD between the posterior and reference and between the prior and reference was also reduced by 33 % with a mean value of 1.15. We identified temporal and spatial scales on which the inversion system maximizes the derived information; monthly temporal scales at around 200 km spatial resolution seem to maximize the information gain.

  6. A catchment scale water balance model for FIFE

    NASA Technical Reports Server (NTRS)

    Famiglietti, J. S.; Wood, E. F.; Sivapalan, M.; Thongs, D. J.

    1992-01-01

    A catchment scale water balance model is presented and used to predict evaporation from the King's Creek catchment at the First ISLSCP Field Experiment site on the Konza Prairie, Kansas. The model incorporates spatial variability in topography, soils, and precipitation to compute the land surface hydrologic fluxes. A network of 20 rain gages was employed to measure rainfall across the catchment in the summer of 1987. These data were spatially interpolated and used to drive the model during storm periods. During interstorm periods the model was driven by the estimated potential evaporation, which was calculated using net radiation data collected at site 2. Model-computed evaporation is compared to that observed, both at site 2 (grid location 1916-BRS) and the catchment scale, for the simulation period from June 1 to October 9, 1987.

  7. Impact of spatially correlated pore-scale heterogeneity on drying porous media

    NASA Astrophysics Data System (ADS)

    Borgman, Oshri; Fantinel, Paolo; Lühder, Wieland; Goehring, Lucas; Holtzman, Ran

    2017-07-01

    We study the effect of spatially-correlated heterogeneity on isothermal drying of porous media. We combine a minimal pore-scale model with microfluidic experiments with the same pore geometry. Our simulated drying behavior compares favorably with experiments, considering the large sensitivity of the emergent behavior to the uncertainty associated with even small manufacturing errors. We show that increasing the correlation length in particle sizes promotes preferential drying of clusters of large pores, prolonging liquid connectivity and surface wetness and thus higher drying rates for longer periods. Our findings improve our quantitative understanding of how pore-scale heterogeneity impacts drying, which plays a role in a wide range of processes ranging from fuel cells to curing of paints and cements to global budgets of energy, water and solutes in soils.

  8. Continental-scale temperature covariance in proxy reconstructions and climate models

    NASA Astrophysics Data System (ADS)

    Hartl-Meier, Claudia; Büntgen, Ulf; Smerdon, Jason; Zorita, Eduardo; Krusic, Paul; Ljungqvist, Fredrik; Schneider, Lea; Esper, Jan

    2017-04-01

    Inter-continental temperature variability over the past millennium has been reported to be more coherent in climate model simulations than in multi-proxy-based reconstructions, a finding that undermines the representation of spatial variability in either of these approaches. We assess the covariance of summer temperatures among Northern Hemisphere continents by comparing tree-ring based temperature reconstructions with state-of-the-art climate model simulations over the past millennium. We find inter-continental temperature covariance to be larger in tree-ring-only reconstructions compared to those derived from multi-proxy networks, thus enhancing the agreement between proxy- and model-based spatial representations. A detailed comparison of simulated temperatures, however, reveals substantial spread among the models. Over the past millennium, inter-continental temperature correlations are driven by the cooling after major volcanic eruptions in 1257, 1452, 1601, and 1815. The coherence of these synchronizing events appears to be elevated in several climate simulations relative to their own covariance baselines and the proxy reconstructions, suggesting these models overestimate the amplitude of cooling in response to volcanic forcing at large spatial scales.

  9. Spatial Patterns in the Efficiency of the Biological Pump: What Controls Export Ratios at the Global Scale?

    NASA Astrophysics Data System (ADS)

    Moore, J. K.

    2016-02-01

    The efficiency of the biological pump is influenced by complex interactions between chemical, biological, and physical processes. The efficiency of export out of surface waters and down through the water column to the deep ocean has been linked to a number of factors including biota community composition, production of mineral ballast components, physical aggregation and disaggregation processes, and ocean oxygen concentrations. I will examine spatial patterns in the export ratio and the efficiency of the biological pump at the global scale using the Community Earth System Model (CESM). There are strong spatial variations in the export efficiency as simulated by the CESM, which are strongly correlated with new nutrient inputs to the euphotic zone and their impacts on phytoplankton community structure. I will compare CESM simulations that include dynamic, variable export ratios driven by the phytoplankton community structure, with simulations that impose a near-constant export ratio to examine the effects of export efficiency on nutrient and surface chlorophyll distributions. The model predicted export ratios will also be compared with recent satellite-based estimates.

  10. Facing the scaling problem: A multi-methodical approach to simulate soil erosion at hillslope and catchment scale

    NASA Astrophysics Data System (ADS)

    Schmengler, A. C.; Vlek, P. L. G.

    2012-04-01

    Modelling soil erosion requires a holistic understanding of the sediment dynamics in a complex environment. As most erosion models are scale-dependent and their parameterization is spatially limited, their application often requires special care, particularly in data-scarce environments. This study presents a hierarchical approach to overcome the limitations of a single model by using various quantitative methods and soil erosion models to cope with the issues of scale. At hillslope scale, the physically-based Water Erosion Prediction Project (WEPP)-model is used to simulate soil loss and deposition processes. Model simulations of soil loss vary between 5 to 50 t ha-1 yr-1 dependent on the spatial location on the hillslope and have only limited correspondence with the results of the 137Cs technique. These differences in absolute soil loss values could be either due to internal shortcomings of each approach or to external scale-related uncertainties. Pedo-geomorphological soil investigations along a catena confirm that estimations by the 137Cs technique are more appropriate in reflecting both the spatial extent and magnitude of soil erosion at hillslope scale. In order to account for sediment dynamics at a larger scale, the spatially-distributed WaTEM/SEDEM model is used to simulate soil erosion at catchment scale and to predict sediment delivery rates into a small water reservoir. Predicted sediment yield rates are compared with results gained from a bathymetric survey and sediment core analysis. Results show that specific sediment rates of 0.6 t ha-1 yr-1 by the model are in close agreement with observed sediment yield calculated from stratigraphical changes and downcore variations in 137Cs concentrations. Sediment erosion rates averaged over the entire catchment of 1 to 2 t ha-1 yr-1 are significantly lower than results obtained at hillslope scale confirming an inverse correlation between the magnitude of erosion rates and the spatial scale of the model. The study has shown that the use of multiple methods facilitates the calibration and validation of models and might provide a more accurate measure for soil erosion rates in ungauged catchments. Moreover, the approach could be used to identify the most appropriate working and operational scales for soil erosion modelling.

  11. Spatially explicit modeling of particulate nutrient flux in Large global rivers

    NASA Astrophysics Data System (ADS)

    Cohen, S.; Kettner, A.; Mayorga, E.; Harrison, J. A.

    2017-12-01

    Water, sediment, nutrient and carbon fluxes along river networks have undergone considerable alterations in response to anthropogenic and climatic changes, with significant consequences to infrastructure, agriculture, water security, ecology and geomorphology worldwide. However, in a global setting, these changes in fluvial fluxes and their spatial and temporal characteristics are poorly constrained, due to the limited availability of continuous and long-term observations. We present results from a new global-scale particulate modeling framework (WBMsedNEWS) that combines the Global NEWS watershed nutrient export model with the spatially distributed WBMsed water and sediment model. We compare the model predictions against multiple observational datasets. The results indicate that the model is able to accurately predict particulate nutrient (Nitrogen, Phosphorus and Organic Carbon) fluxes on an annual time scale. Analysis of intra-basin nutrient dynamics and fluxes to global oceans is presented.

  12. Spatial and temporal analysis of drought variability at several time scales in Syria during 1961-2012

    NASA Astrophysics Data System (ADS)

    Mathbout, Shifa; Lopez-Bustins, Joan A.; Martin-Vide, Javier; Bech, Joan; Rodrigo, Fernando S.

    2018-02-01

    This paper analyses the observed spatiotemporal characteristics of drought phenomenon in Syria using the Standardised Precipitation Index (SPI) and the Standardised Precipitation Evapotranspiration Index (SPEI). Temporal variability of drought is calculated for various time scales (3, 6, 9, 12, and 24 months) for 20 weather stations over the 1961-2012 period. The spatial patterns of drought were identified by applying a Principal Component Analysis (PCA) to the SPI and SPEI values at different time scales. The results revealed three heterogeneous and spatially well-defined regions with different temporal evolution of droughts: 1) Northeastern (inland desert); 2) Southern (mountainous landscape); 3) Northwestern (Mediterranean coast). The evolutionary characteristics of drought during 1961-2012 were analysed including spatial and temporal variability of SPI and SPEI, the frequency distribution, and the drought duration. The results of the non-parametric Mann-Kendall test applied to the SPI and SPEI series indicate prevailing significant negative trends (drought) at all stations. Both drought indices have been correlated both on spatial and temporal scales and they are highly comparable, especially, over a 12 and 24 month accumulation period. We concluded that the temporal and spatial characteristics of the SPI and SPEI can be used for developing a drought intensity - areal extent - and frequency curve that assesses the variability of regional droughts in Syria. The analysis of both indices suggests that all three regions had a severe drought in the 1990s, which had never been observed before in the country. Furthermore, the 2007-2010 drought was the driest period in the instrumental record, happening just before the onset of the recent conflict in Syria.

  13. Advanced analysis of forest fire clustering

    NASA Astrophysics Data System (ADS)

    Kanevski, Mikhail; Pereira, Mario; Golay, Jean

    2017-04-01

    Analysis of point pattern clustering is an important topic in spatial statistics and for many applications: biodiversity, epidemiology, natural hazards, geomarketing, etc. There are several fundamental approaches used to quantify spatial data clustering using topological, statistical and fractal measures. In the present research, the recently introduced multi-point Morisita index (mMI) is applied to study the spatial clustering of forest fires in Portugal. The data set consists of more than 30000 fire events covering the time period from 1975 to 2013. The distribution of forest fires is very complex and highly variable in space. mMI is a multi-point extension of the classical two-point Morisita index. In essence, mMI is estimated by covering the region under study by a grid and by computing how many times more likely it is that m points selected at random will be from the same grid cell than it would be in the case of a complete random Poisson process. By changing the number of grid cells (size of the grid cells), mMI characterizes the scaling properties of spatial clustering. From mMI, the data intrinsic dimension (fractal dimension) of the point distribution can be estimated as well. In this study, the mMI of forest fires is compared with the mMI of random patterns (RPs) generated within the validity domain defined as the forest area of Portugal. It turns out that the forest fires are highly clustered inside the validity domain in comparison with the RPs. Moreover, they demonstrate different scaling properties at different spatial scales. The results obtained from the mMI analysis are also compared with those of fractal measures of clustering - box counting and sand box counting approaches. REFERENCES Golay J., Kanevski M., Vega Orozco C., Leuenberger M., 2014: The multipoint Morisita index for the analysis of spatial patterns. Physica A, 406, 191-202. Golay J., Kanevski M. 2015: A new estimator of intrinsic dimension based on the multipoint Morisita index. Pattern Recognition, 48, 4070-4081.

  14. Quantifying drivers of wild pig movement across multiple spatial and temporal scales.

    PubMed

    Kay, Shannon L; Fischer, Justin W; Monaghan, Andrew J; Beasley, James C; Boughton, Raoul; Campbell, Tyler A; Cooper, Susan M; Ditchkoff, Stephen S; Hartley, Steve B; Kilgo, John C; Wisely, Samantha M; Wyckoff, A Christy; VerCauteren, Kurt C; Pepin, Kim M

    2017-01-01

    The movement behavior of an animal is determined by extrinsic and intrinsic factors that operate at multiple spatio-temporal scales, yet much of our knowledge of animal movement comes from studies that examine only one or two scales concurrently. Understanding the drivers of animal movement across multiple scales is crucial for understanding the fundamentals of movement ecology, predicting changes in distribution, describing disease dynamics, and identifying efficient methods of wildlife conservation and management. We obtained over 400,000 GPS locations of wild pigs from 13 different studies spanning six states in southern U.S.A., and quantified movement rates and home range size within a single analytical framework. We used a generalized additive mixed model framework to quantify the effects of five broad predictor categories on movement: individual-level attributes, geographic factors, landscape attributes, meteorological conditions, and temporal variables. We examined effects of predictors across three temporal scales: daily, monthly, and using all data during the study period. We considered both local environmental factors such as daily weather data and distance to various resources on the landscape, as well as factors acting at a broader spatial scale such as ecoregion and season. We found meteorological variables (temperature and pressure), landscape features (distance to water sources), a broad-scale geographic factor (ecoregion), and individual-level characteristics (sex-age class), drove wild pig movement across all scales, but both the magnitude and shape of covariate relationships to movement differed across temporal scales. The analytical framework we present can be used to assess movement patterns arising from multiple data sources for a range of species while accounting for spatio-temporal correlations. Our analyses show the magnitude by which reaction norms can change based on the temporal scale of response data, illustrating the importance of appropriately defining temporal scales of both the movement response and covariates depending on the intended implications of research (e.g., predicting effects of movement due to climate change versus planning local-scale management). We argue that consideration of multiple spatial scales within the same framework (rather than comparing across separate studies post-hoc ) gives a more accurate quantification of cross-scale spatial effects by appropriately accounting for error correlation.

  15. Effect of Variable Spatial Scales on USLE-GIS Computations

    NASA Astrophysics Data System (ADS)

    Patil, R. J.; Sharma, S. K.

    2017-12-01

    Use of appropriate spatial scale is very important in Universal Soil Loss Equation (USLE) based spatially distributed soil erosion modelling. This study aimed at assessment of annual rates of soil erosion at different spatial scales/grid sizes and analysing how changes in spatial scales affect USLE-GIS computations using simulation and statistical variabilities. Efforts have been made in this study to recommend an optimum spatial scale for further USLE-GIS computations for management and planning in the study area. The present research study was conducted in Shakkar River watershed, situated in Narsinghpur and Chhindwara districts of Madhya Pradesh, India. Remote Sensing and GIS techniques were integrated with Universal Soil Loss Equation (USLE) to predict spatial distribution of soil erosion in the study area at four different spatial scales viz; 30 m, 50 m, 100 m, and 200 m. Rainfall data, soil map, digital elevation model (DEM) and an executable C++ program, and satellite image of the area were used for preparation of the thematic maps for various USLE factors. Annual rates of soil erosion were estimated for 15 years (1992 to 2006) at four different grid sizes. The statistical analysis of four estimated datasets showed that sediment loss dataset at 30 m spatial scale has a minimum standard deviation (2.16), variance (4.68), percent deviation from observed values (2.68 - 18.91 %), and highest coefficient of determination (R2 = 0.874) among all the four datasets. Thus, it is recommended to adopt this spatial scale for USLE-GIS computations in the study area due to its minimum statistical variability and better agreement with the observed sediment loss data. This study also indicates large scope for use of finer spatial scales in spatially distributed soil erosion modelling.

  16. Getting the Big Picture: Development of Spatial Scaling Abilities

    ERIC Educational Resources Information Center

    Frick, Andrea; Newcombe, Nora S.

    2012-01-01

    Spatial scaling is an integral aspect of many spatial tasks that involve symbol-to-referent correspondences (e.g., map reading, drawing). In this study, we asked 3-6-year-olds and adults to locate objects in a two-dimensional spatial layout using information from a second spatial representation (map). We examined how scaling factor and reference…

  17. Inflation in the closed FLRW model and the CMB

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bonga, Béatrice; Gupt, Brajesh; Yokomizo, Nelson, E-mail: bpb165@psu.edu, E-mail: bgupt@gravity.psu.edu, E-mail: yokomizo@gravity.psu.edu

    2016-10-01

    Recent cosmic microwave background (CMB) observations put strong constraints on the spatial curvature via estimation of the parameter Ω{sub k} assuming an almost scale invariant primordial power spectrum. We study the evolution of the background geometry and gauge-invariant scalar perturbations in an inflationary closed FLRW model and calculate the primordial power spectrum. We find that the inflationary dynamics is modified due to the presence of spatial curvature, leading to corrections to the nearly scale invariant power spectrum at the end of inflation. When evolved to the surface of last scattering, the resulting temperature anisotropy spectrum ( C {sup TT}{sub ℓ})more » shows deficit of power at low multipoles (ℓ < 20). By comparing our results with the recent Planck data we discuss the role of spatial curvature in accounting for CMB anomalies and in the estimation of the parameter Ω{sub k}. Since the curvature effects are limited to low multipoles, the Planck estimation of cosmological parameters remains robust under inclusion of positive spatial curvature.« less

  18. Vertical land motion controls regional sea level rise patterns on the United States east coast since 1900

    NASA Astrophysics Data System (ADS)

    Piecuch, C. G.; Huybers, P. J.; Hay, C.; Mitrovica, J. X.; Little, C. M.; Ponte, R. M.; Tingley, M.

    2017-12-01

    Understanding observed spatial variations in centennial relative sea level trends on the United States east coast has important scientific and societal applications. Past studies based on models and proxies variously suggest roles for crustal displacement, ocean dynamics, and melting of the Greenland ice sheet. Here we perform joint Bayesian inference on regional relative sea level, vertical land motion, and absolute sea level fields based on tide gauge records and GPS data. Posterior solutions show that regional vertical land motion explains most (80% median estimate) of the spatial variance in the large-scale relative sea level trend field on the east coast over 1900-2016. The posterior estimate for coastal absolute sea level rise is remarkably spatially uniform compared to previous studies, with a spatial average of 1.4-2.3 mm/yr (95% credible interval). Results corroborate glacial isostatic adjustment models and reveal that meaningful long-period, large-scale vertical velocity signals can be extracted from short GPS records.

  19. Geovisual analytics to enhance spatial scan statistic interpretation: an analysis of U.S. cervical cancer mortality

    PubMed Central

    Chen, Jin; Roth, Robert E; Naito, Adam T; Lengerich, Eugene J; MacEachren, Alan M

    2008-01-01

    Background Kulldorff's spatial scan statistic and its software implementation – SaTScan – are widely used for detecting and evaluating geographic clusters. However, two issues make using the method and interpreting its results non-trivial: (1) the method lacks cartographic support for understanding the clusters in geographic context and (2) results from the method are sensitive to parameter choices related to cluster scaling (abbreviated as scaling parameters), but the system provides no direct support for making these choices. We employ both established and novel geovisual analytics methods to address these issues and to enhance the interpretation of SaTScan results. We demonstrate our geovisual analytics approach in a case study analysis of cervical cancer mortality in the U.S. Results We address the first issue by providing an interactive visual interface to support the interpretation of SaTScan results. Our research to address the second issue prompted a broader discussion about the sensitivity of SaTScan results to parameter choices. Sensitivity has two components: (1) the method can identify clusters that, while being statistically significant, have heterogeneous contents comprised of both high-risk and low-risk locations and (2) the method can identify clusters that are unstable in location and size as the spatial scan scaling parameter is varied. To investigate cluster result stability, we conducted multiple SaTScan runs with systematically selected parameters. The results, when scanning a large spatial dataset (e.g., U.S. data aggregated by county), demonstrate that no single spatial scan scaling value is known to be optimal to identify clusters that exist at different scales; instead, multiple scans that vary the parameters are necessary. We introduce a novel method of measuring and visualizing reliability that facilitates identification of homogeneous clusters that are stable across analysis scales. Finally, we propose a logical approach to proceed through the analysis of SaTScan results. Conclusion The geovisual analytics approach described in this manuscript facilitates the interpretation of spatial cluster detection methods by providing cartographic representation of SaTScan results and by providing visualization methods and tools that support selection of SaTScan parameters. Our methods distinguish between heterogeneous and homogeneous clusters and assess the stability of clusters across analytic scales. Method We analyzed the cervical cancer mortality data for the United States aggregated by county between 2000 and 2004. We ran SaTScan on the dataset fifty times with different parameter choices. Our geovisual analytics approach couples SaTScan with our visual analytic platform, allowing users to interactively explore and compare SaTScan results produced by different parameter choices. The Standardized Mortality Ratio and reliability scores are visualized for all the counties to identify stable, homogeneous clusters. We evaluated our analysis result by comparing it to that produced by other independent techniques including the Empirical Bayes Smoothing and Kafadar spatial smoother methods. The geovisual analytics approach introduced here is developed and implemented in our Java-based Visual Inquiry Toolkit. PMID:18992163

  20. Geovisual analytics to enhance spatial scan statistic interpretation: an analysis of U.S. cervical cancer mortality.

    PubMed

    Chen, Jin; Roth, Robert E; Naito, Adam T; Lengerich, Eugene J; Maceachren, Alan M

    2008-11-07

    Kulldorff's spatial scan statistic and its software implementation - SaTScan - are widely used for detecting and evaluating geographic clusters. However, two issues make using the method and interpreting its results non-trivial: (1) the method lacks cartographic support for understanding the clusters in geographic context and (2) results from the method are sensitive to parameter choices related to cluster scaling (abbreviated as scaling parameters), but the system provides no direct support for making these choices. We employ both established and novel geovisual analytics methods to address these issues and to enhance the interpretation of SaTScan results. We demonstrate our geovisual analytics approach in a case study analysis of cervical cancer mortality in the U.S. We address the first issue by providing an interactive visual interface to support the interpretation of SaTScan results. Our research to address the second issue prompted a broader discussion about the sensitivity of SaTScan results to parameter choices. Sensitivity has two components: (1) the method can identify clusters that, while being statistically significant, have heterogeneous contents comprised of both high-risk and low-risk locations and (2) the method can identify clusters that are unstable in location and size as the spatial scan scaling parameter is varied. To investigate cluster result stability, we conducted multiple SaTScan runs with systematically selected parameters. The results, when scanning a large spatial dataset (e.g., U.S. data aggregated by county), demonstrate that no single spatial scan scaling value is known to be optimal to identify clusters that exist at different scales; instead, multiple scans that vary the parameters are necessary. We introduce a novel method of measuring and visualizing reliability that facilitates identification of homogeneous clusters that are stable across analysis scales. Finally, we propose a logical approach to proceed through the analysis of SaTScan results. The geovisual analytics approach described in this manuscript facilitates the interpretation of spatial cluster detection methods by providing cartographic representation of SaTScan results and by providing visualization methods and tools that support selection of SaTScan parameters. Our methods distinguish between heterogeneous and homogeneous clusters and assess the stability of clusters across analytic scales. We analyzed the cervical cancer mortality data for the United States aggregated by county between 2000 and 2004. We ran SaTScan on the dataset fifty times with different parameter choices. Our geovisual analytics approach couples SaTScan with our visual analytic platform, allowing users to interactively explore and compare SaTScan results produced by different parameter choices. The Standardized Mortality Ratio and reliability scores are visualized for all the counties to identify stable, homogeneous clusters. We evaluated our analysis result by comparing it to that produced by other independent techniques including the Empirical Bayes Smoothing and Kafadar spatial smoother methods. The geovisual analytics approach introduced here is developed and implemented in our Java-based Visual Inquiry Toolkit.

  1. The Canadian Hydrological Model (CHM): A multi-scale, variable-complexity hydrological model for cold regions

    NASA Astrophysics Data System (ADS)

    Marsh, C.; Pomeroy, J. W.; Wheater, H. S.

    2016-12-01

    There is a need for hydrological land surface schemes that can link to atmospheric models, provide hydrological prediction at multiple scales and guide the development of multiple objective water predictive systems. Distributed raster-based models suffer from an overrepresentation of topography, leading to wasted computational effort that increases uncertainty due to greater numbers of parameters and initial conditions. The Canadian Hydrological Model (CHM) is a modular, multiphysics, spatially distributed modelling framework designed for representing hydrological processes, including those that operate in cold-regions. Unstructured meshes permit variable spatial resolution, allowing coarse resolutions at low spatial variability and fine resolutions as required. Model uncertainty is reduced by lessening the necessary computational elements relative to high-resolution rasters. CHM uses a novel multi-objective approach for unstructured triangular mesh generation that fulfills hydrologically important constraints (e.g., basin boundaries, water bodies, soil classification, land cover, elevation, and slope/aspect). This provides an efficient spatial representation of parameters and initial conditions, as well as well-formed and well-graded triangles that are suitable for numerical discretization. CHM uses high-quality open source libraries and high performance computing paradigms to provide a framework that allows for integrating current state-of-the-art process algorithms. The impact of changes to model structure, including individual algorithms, parameters, initial conditions, driving meteorology, and spatial/temporal discretization can be easily tested. Initial testing of CHM compared spatial scales and model complexity for a spring melt period at a sub-arctic mountain basin. The meshing algorithm reduced the total number of computational elements and preserved the spatial heterogeneity of predictions.

  2. Monitoring survival rates of landbirds at varying spatial scales: An application of the MAPS Program

    USGS Publications Warehouse

    Rosenberg, D.K.; DeSante, D.F.; Hines, J.E.; Bonney, Rick; Pashley, David N.; Cooper, Robert; Niles, Larry

    2000-01-01

    Survivorship is a primary demographic parameter affecting population dynamics, and thus trends in species abundance. The Monitoring Avian Productivity and Survivorship (MAPS) program is a cooperative effort designed to monitor landbird demographic parameters. A principle goal of MAPS is to estimate annual survivorship and identify spatial patterns and temporal trends in these rates. We evaluated hypotheses of spatial patterns in survival rates among a collection of neighboring sampling sites, such as within national forests, among biogeographic provinces, and between breeding populations that winter in either Central or South America, and compared these geographic-specific models to a model of a common survival rate among all sampling sites. We used data collected during 1992-1995 from Swainson's Thrush (Cathorus ustulatus) populations in the western region of the United States. We evaluated the ability to detect spatial and temporal patterns of survivorship with simulated data. We found weak evidence of spatial differences in survival rates at the local scale of 'location,' which typically contained 3 mist-netting stations. There was little evidence of differences in survival rates among biogeographic provinces or between populations that winter in either Central or South America. When data were pooled for a regional estimate of survivorship, the percent relative bias due to pooling 'locations' was 12 years of monitoring. Detection of spatial patterns and temporal trends in survival rates from local to regional scales will provide important information for management and future research directed toward conservation of landbirds.

  3. Explaining local-scale species distributions: relative contributions of spatial autocorrelation and landscape heterogeneity for an avian assemblage

    USGS Publications Warehouse

    Mattsson, Brady J.; Zipkin, Elise F.; Gardner, Beth; Blank, Peter J.; Sauer, John R.; Royle, J. Andrew

    2013-01-01

    Understanding interactions between mobile species distributions and landcover characteristics remains an outstanding challenge in ecology. Multiple factors could explain species distributions including endogenous evolutionary traits leading to conspecific clustering and endogenous habitat features that support life history requirements. Birds are a useful taxon for examining hypotheses about the relative importance of these factors among species in a community. We developed a hierarchical Bayes approach to model the relationships between bird species occupancy and local landcover variables accounting for spatial autocorrelation, species similarities, and partial observability. We fit alternative occupancy models to detections of 90 bird species observed during repeat visits to 316 point-counts forming a 400-m grid throughout the Patuxent Wildlife Research Refuge in Maryland, USA. Models with landcover variables performed significantly better than our autologistic and null models, supporting the hypothesis that local landcover heterogeneity is important as an exogenous driver for species distributions. Conspecific clustering alone was a comparatively poor descriptor of local community composition, but there was evidence for spatial autocorrelation in all species. Considerable uncertainty remains whether landcover combined with spatial autocorrelation is most parsimonious for describing bird species distributions at a local scale. Spatial structuring may be weaker at intermediate scales within which dispersal is less frequent, information flows are localized, and landcover types become spatially diversified and therefore exhibit little aggregation. Examining such hypotheses across species assemblages contributes to our understanding of community-level associations with conspecifics and landscape composition.

  4. Explaining local-scale species distributions: relative contributions of spatial autocorrelation and landscape heterogeneity for an avian assemblage.

    PubMed

    Mattsson, Brady J; Zipkin, Elise F; Gardner, Beth; Blank, Peter J; Sauer, John R; Royle, J Andrew

    2013-01-01

    Understanding interactions between mobile species distributions and landcover characteristics remains an outstanding challenge in ecology. Multiple factors could explain species distributions including endogenous evolutionary traits leading to conspecific clustering and endogenous habitat features that support life history requirements. Birds are a useful taxon for examining hypotheses about the relative importance of these factors among species in a community. We developed a hierarchical Bayes approach to model the relationships between bird species occupancy and local landcover variables accounting for spatial autocorrelation, species similarities, and partial observability. We fit alternative occupancy models to detections of 90 bird species observed during repeat visits to 316 point-counts forming a 400-m grid throughout the Patuxent Wildlife Research Refuge in Maryland, USA. Models with landcover variables performed significantly better than our autologistic and null models, supporting the hypothesis that local landcover heterogeneity is important as an exogenous driver for species distributions. Conspecific clustering alone was a comparatively poor descriptor of local community composition, but there was evidence for spatial autocorrelation in all species. Considerable uncertainty remains whether landcover combined with spatial autocorrelation is most parsimonious for describing bird species distributions at a local scale. Spatial structuring may be weaker at intermediate scales within which dispersal is less frequent, information flows are localized, and landcover types become spatially diversified and therefore exhibit little aggregation. Examining such hypotheses across species assemblages contributes to our understanding of community-level associations with conspecifics and landscape composition.

  5. Explaining Local-Scale Species Distributions: Relative Contributions of Spatial Autocorrelation and Landscape Heterogeneity for an Avian Assemblage

    PubMed Central

    Mattsson, Brady J.; Zipkin, Elise F.; Gardner, Beth; Blank, Peter J.; Sauer, John R.; Royle, J. Andrew

    2013-01-01

    Understanding interactions between mobile species distributions and landcover characteristics remains an outstanding challenge in ecology. Multiple factors could explain species distributions including endogenous evolutionary traits leading to conspecific clustering and endogenous habitat features that support life history requirements. Birds are a useful taxon for examining hypotheses about the relative importance of these factors among species in a community. We developed a hierarchical Bayes approach to model the relationships between bird species occupancy and local landcover variables accounting for spatial autocorrelation, species similarities, and partial observability. We fit alternative occupancy models to detections of 90 bird species observed during repeat visits to 316 point-counts forming a 400-m grid throughout the Patuxent Wildlife Research Refuge in Maryland, USA. Models with landcover variables performed significantly better than our autologistic and null models, supporting the hypothesis that local landcover heterogeneity is important as an exogenous driver for species distributions. Conspecific clustering alone was a comparatively poor descriptor of local community composition, but there was evidence for spatial autocorrelation in all species. Considerable uncertainty remains whether landcover combined with spatial autocorrelation is most parsimonious for describing bird species distributions at a local scale. Spatial structuring may be weaker at intermediate scales within which dispersal is less frequent, information flows are localized, and landcover types become spatially diversified and therefore exhibit little aggregation. Examining such hypotheses across species assemblages contributes to our understanding of community-level associations with conspecifics and landscape composition. PMID:23393564

  6. Effects of finite hot-wire spatial resolution on turbulence statistics and velocity spectra in a round turbulent free jet

    NASA Astrophysics Data System (ADS)

    Sadeghi, Hamed; Lavoie, Philippe; Pollard, Andrew

    2018-03-01

    The effect of finite hot-wire spatial resolution on turbulence statistics and velocity spectra in a round turbulent free jet is investigated. To quantify spatial resolution effects, measurements were taken using a nano-scale thermal anemometry probe (NSTAP) and compared to results from conventional hot-wires with sensing lengths of l=0.5 and 1 mm. The NSTAP has a sensing length significantly smaller than the Kolmogorov length scale η for the present experimental conditions, whereas the sensing lengths for the conventional probes are larger than η. The spatial resolution is found to have a significant impact on the dissipation both on and off the jet centreline with the NSTAP results exceeding those obtained from the conventional probes. The resolution effects along the jet centreline are adequately predicted using a Wyngaard-type spectral technique (Wyngaard in J Sci Instr 1(2):1105-1108,1968), but additional attenuation on the measured turbulence quantities are observed off the centreline. The magnitude of this attenuation is a function of both the ratio of wire length to Kolmogorov length scale and the magnitude of the shear. The effect of spatial resolution is noted to have an impact on the power-law decay parameters for the turbulent kinetic energy that is computed. The effect of spatial filtering on the streamwise dissipation energy spectra is also considered. Empirical functions are proposed to estimate the effect of finite resolution, which take into account the mean shear.

  7. Evaluating single-pass catch as a tool for identifying spatial pattern in fish distribution

    USGS Publications Warehouse

    Bateman, Douglas S.; Gresswell, Robert E.; Torgersen, Christian E.

    2005-01-01

    We evaluate the efficacy of single-pass electrofishing without blocknets as a tool for collecting spatially continuous fish distribution data in headwater streams. We compare spatial patterns in abundance, sampling effort, and length-frequency distributions from single-pass sampling of coastal cutthroat trout (Oncorhynchus clarki clarki) to data obtained from a more precise multiple-pass removal electrofishing method in two mid-sized (500–1000 ha) forested watersheds in western Oregon. Abundance estimates from single- and multiple-pass removal electrofishing were positively correlated in both watersheds, r = 0.99 and 0.86. There were no significant trends in capture probabilities at the watershed scale (P > 0.05). Moreover, among-sample variation in fish abundance was higher than within-sample error in both streams indicating that increased precision of unit-scale abundance estimates would provide less information on patterns of abundance than increasing the fraction of habitat units sampled. In the two watersheds, respectively, single-pass electrofishing captured 78 and 74% of the estimated population of cutthroat trout with 7 and 10% of the effort. At the scale of intermediate-sized watersheds, single-pass electrofishing exhibited a sufficient level of precision to be effective in detecting spatial patterns of cutthroat trout abundance and may be a useful tool for providing the context for investigating fish-habitat relationships at multiple scales.

  8. A perturbation analysis of a mechanical model for stable spatial patterning in embryology

    NASA Astrophysics Data System (ADS)

    Bentil, D. E.; Murray, J. D.

    1992-12-01

    We investigate a mechanical cell-traction mechanism that generates stationary spatial patterns. A linear analysis highlights the model's potential for these heterogeneous solutions. We use multiple-scale perturbation techniques to study the evolution of these solutions and compare our solutions with numerical simulations of the model system. We discuss some potential biological applications among which are the formation of ridge patterns, dermatoglyphs, and wound healing.

  9. Representation of vegetation by continental data sets derived from NOAA-AVHRR data

    NASA Technical Reports Server (NTRS)

    Justice, C. O.; Townshend, J. R. G.; Kalb, V. L.

    1991-01-01

    Images of the normalized difference vegetation index (NDVI) are examined with specific attention given to the effect of spatial scales on the understanding of surface phenomena. A scale variance analysis is conducted on NDVI annual and seasonal images of Africa taken from 1987 NOAA-AVHRR data at spatial scales ranging from 8-512 km. The scales at which spatial variation takes place are determined and the relative magnitude of the variations are considered. Substantial differences are demonstrated, notably an increase in spatial variation with coarsening spatial resolution. Different responses in scale variance as a function of spatial resolution are noted in an analysis of maximum value composites for February and September; the difference is most marked in areas with very seasonal vegetation. The spatial variation at different scales is attributed to different factors, and methods involving the averaging of areas of transition and surface heterogeneity can oversimplify surface conditions. The spatial characteristics and the temporal variability of areas should be considered to accurately apply satellite data to global models.

  10. Multi-Scale Clustering of Lyme Disease Risk at the Expanding Leading Edge of the Range of Ixodes scapularis in Canada.

    PubMed

    Ripoche, Marion; Lindsay, Leslie Robbin; Ludwig, Antoinette; Ogden, Nicholas H; Thivierge, Karine; Leighton, Patrick A

    2018-03-27

    Since its detection in Canada in the early 1990s, Ixodes scapularis , the primary tick vector of Lyme disease in eastern North America, has continued to expand northward. Estimates of the tick's broad-scale distribution are useful for tracking the extent of the Lyme disease risk zone; however, tick distribution may vary widely within this zone. Here, we investigated I. scapularis nymph distribution at three spatial scales across the Lyme disease emergence zone in southern Quebec, Canada. We collected ticks and compared the nymph densities among different woodlands and different plots and transects within the same woodland. Hot spot analysis highlighted significant nymph clustering at each spatial scale. In regression models, nymph abundance was associated with litter depth, humidity, and elevation, which contribute to a suitable habitat for ticks, but also with the distance from the trail and the type of trail, which could be linked to host distribution and human disturbance. Accounting for this heterogeneous nymph distribution at a fine spatial scale could help improve Lyme disease management strategies but also help people to understand the risk variation around them and to adopt appropriate behaviors, such as staying on the trail in infested parks to limit their exposure to the vector and associated pathogens.

  11. Multi-Scale Clustering of Lyme Disease Risk at the Expanding Leading Edge of the Range of Ixodes scapularis in Canada

    PubMed Central

    Lindsay, Leslie Robbin; Ludwig, Antoinette; Ogden, Nicholas H.; Thivierge, Karine; Leighton, Patrick A.

    2018-01-01

    Since its detection in Canada in the early 1990s, Ixodes scapularis, the primary tick vector of Lyme disease in eastern North America, has continued to expand northward. Estimates of the tick’s broad-scale distribution are useful for tracking the extent of the Lyme disease risk zone; however, tick distribution may vary widely within this zone. Here, we investigated I. scapularis nymph distribution at three spatial scales across the Lyme disease emergence zone in southern Quebec, Canada. We collected ticks and compared the nymph densities among different woodlands and different plots and transects within the same woodland. Hot spot analysis highlighted significant nymph clustering at each spatial scale. In regression models, nymph abundance was associated with litter depth, humidity, and elevation, which contribute to a suitable habitat for ticks, but also with the distance from the trail and the type of trail, which could be linked to host distribution and human disturbance. Accounting for this heterogeneous nymph distribution at a fine spatial scale could help improve Lyme disease management strategies but also help people to understand the risk variation around them and to adopt appropriate behaviors, such as staying on the trail in infested parks to limit their exposure to the vector and associated pathogens. PMID:29584627

  12. Geometry and scaling laws of excursion and iso-sets of enstrophy and dissipation in isotropic turbulence

    NASA Astrophysics Data System (ADS)

    Elsas, José Hugo; Szalay, Alexander S.; Meneveau, Charles

    2018-04-01

    Motivated by interest in the geometry of high intensity events of turbulent flows, we examine the spatial correlation functions of sets where turbulent events are particularly intense. These sets are defined using indicator functions on excursion and iso-value sets. Their geometric scaling properties are analysed by examining possible power-law decay of their radial correlation function. We apply the analysis to enstrophy, dissipation and velocity gradient invariants Q and R and their joint spatial distributions, using data from a direct numerical simulation of isotropic turbulence at Reλ ≈ 430. While no fractal scaling is found in the inertial range using box-counting in the finite Reynolds number flow considered here, power-law scaling in the inertial range is found in the radial correlation functions. Thus, a geometric characterisation in terms of these sets' correlation dimension is possible. Strong dependence on the enstrophy and dissipation threshold is found, consistent with multifractal behaviour. Nevertheless, the lack of scaling of the box-counting analysis precludes direct quantitative comparisons with earlier work based on multifractal formalism. Surprising trends, such as a lower correlation dimension for strong dissipation events compared to strong enstrophy events, are observed and interpreted in terms of spatial coherence of vortices in the flow.

  13. Comparing SMAP to Macro-scale and Hyper-resolution Land Surface Models over Continental U. S.

    NASA Astrophysics Data System (ADS)

    Pan, Ming; Cai, Xitian; Chaney, Nathaniel; Wood, Eric

    2016-04-01

    SMAP sensors collect moisture information in top soil at the spatial resolution of ~40 km (radiometer) and ~1 to 3 km (radar, before its failure in July 2015). Such information is extremely valuable for understanding various terrestrial hydrologic processes and their implications on human life. At the same time, soil moisture is a joint consequence of numerous physical processes (precipitation, temperature, radiation, topography, crop/vegetation dynamics, soil properties, etc.) that happen at a wide range of scales from tens of kilometers down to tens of meters. Therefore, a full and thorough analysis/exploration of SMAP data products calls for investigations at multiple spatial scales - from regional, to catchment, and to field scales. Here we first compare the SMAP retrievals to the Variable Infiltration Capacity (VIC) macro-scale land surface model simulations over the continental U. S. region at 3 km resolution. The forcing inputs to the model are merged/downscaled from a suite of best available data products including the NLDAS-2 forcing, Stage IV and Stage II precipitation, GOES Surface and Insolation Products, and fine elevation data. The near real time VIC simulation is intended to provide a source of large scale comparisons at the active sensor resolution. Beyond the VIC model scale, we perform comparisons at 30 m resolution against the recently developed HydroBloks hyper-resolution land surface model over several densely gauged USDA experimental watersheds. Comparisons are also made against in-situ point-scale observations from various SMAP Cal/Val and field campaign sites.

  14. Explaining variation in tropical plant community composition: influence of environmental and spatial data quality.

    PubMed

    Jones, Mirkka M; Tuomisto, Hanna; Borcard, Daniel; Legendre, Pierre; Clark, David B; Olivas, Paulo C

    2008-03-01

    The degree to which variation in plant community composition (beta-diversity) is predictable from environmental variation, relative to other spatial processes, is of considerable current interest. We addressed this question in Costa Rican rain forest pteridophytes (1,045 plots, 127 species). We also tested the effect of data quality on the results, which has largely been overlooked in earlier studies. To do so, we compared two alternative spatial models [polynomial vs. principal coordinates of neighbour matrices (PCNM)] and ten alternative environmental models (all available environmental variables vs. four subsets, and including their polynomials vs. not). Of the environmental data types, soil chemistry contributed most to explaining pteridophyte community variation, followed in decreasing order of contribution by topography, soil type and forest structure. Environmentally explained variation increased moderately when polynomials of the environmental variables were included. Spatially explained variation increased substantially when the multi-scale PCNM spatial model was used instead of the traditional, broad-scale polynomial spatial model. The best model combination (PCNM spatial model and full environmental model including polynomials) explained 32% of pteridophyte community variation, after correcting for the number of sampling sites and explanatory variables. Overall evidence for environmental control of beta-diversity was strong, and the main floristic gradients detected were correlated with environmental variation at all scales encompassed by the study (c. 100-2,000 m). Depending on model choice, however, total explained variation differed more than fourfold, and the apparent relative importance of space and environment could be reversed. Therefore, we advocate a broader recognition of the impacts that data quality has on analysis results. A general understanding of the relative contributions of spatial and environmental processes to species distributions and beta-diversity requires that methodological artefacts are separated from real ecological differences.

  15. Scale and modeling issues in water resources planning

    USGS Publications Warehouse

    Lins, H.F.; Wolock, D.M.; McCabe, G.J.

    1997-01-01

    Resource planners and managers interested in utilizing climate model output as part of their operational activities immediately confront the dilemma of scale discordance. Their functional responsibilities cover relatively small geographical areas and necessarily require data of relatively high spatial resolution. Climate models cover a large geographical, i.e. global, domain and produce data at comparatively low spatial resolution. Although the scale differences between model output and planning input are large, several techniques have been developed for disaggregating climate model output to a scale appropriate for use in water resource planning and management applications. With techniques in hand to reduce the limitations imposed by scale discordance, water resource professionals must now confront a more fundamental constraint on the use of climate models-the inability to produce accurate representations and forecasts of regional climate. Given the current capabilities of climate models, and the likelihood that the uncertainty associated with long-term climate model forecasts will remain high for some years to come, the water resources planning community may find it impractical to utilize such forecasts operationally.

  16. Correcting Spatial Variance of RCM for GEO SAR Imaging Based on Time-Frequency Scaling.

    PubMed

    Yu, Ze; Lin, Peng; Xiao, Peng; Kang, Lihong; Li, Chunsheng

    2016-07-14

    Compared with low-Earth orbit synthetic aperture radar (SAR), a geosynchronous (GEO) SAR can have a shorter revisit period and vaster coverage. However, relative motion between this SAR and targets is more complicated, which makes range cell migration (RCM) spatially variant along both range and azimuth. As a result, efficient and precise imaging becomes difficult. This paper analyzes and models spatial variance for GEO SAR in the time and frequency domains. A novel algorithm for GEO SAR imaging with a resolution of 2 m in both the ground cross-range and range directions is proposed, which is composed of five steps. The first is to eliminate linear azimuth variance through the first azimuth time scaling. The second is to achieve RCM correction and range compression. The third is to correct residual azimuth variance by the second azimuth time-frequency scaling. The fourth and final steps are to accomplish azimuth focusing and correct geometric distortion. The most important innovation of this algorithm is implementation of the time-frequency scaling to correct high-order azimuth variance. As demonstrated by simulation results, this algorithm can accomplish GEO SAR imaging with good and uniform imaging quality over the entire swath.

  17. Correcting Spatial Variance of RCM for GEO SAR Imaging Based on Time-Frequency Scaling

    PubMed Central

    Yu, Ze; Lin, Peng; Xiao, Peng; Kang, Lihong; Li, Chunsheng

    2016-01-01

    Compared with low-Earth orbit synthetic aperture radar (SAR), a geosynchronous (GEO) SAR can have a shorter revisit period and vaster coverage. However, relative motion between this SAR and targets is more complicated, which makes range cell migration (RCM) spatially variant along both range and azimuth. As a result, efficient and precise imaging becomes difficult. This paper analyzes and models spatial variance for GEO SAR in the time and frequency domains. A novel algorithm for GEO SAR imaging with a resolution of 2 m in both the ground cross-range and range directions is proposed, which is composed of five steps. The first is to eliminate linear azimuth variance through the first azimuth time scaling. The second is to achieve RCM correction and range compression. The third is to correct residual azimuth variance by the second azimuth time-frequency scaling. The fourth and final steps are to accomplish azimuth focusing and correct geometric distortion. The most important innovation of this algorithm is implementation of the time-frequency scaling to correct high-order azimuth variance. As demonstrated by simulation results, this algorithm can accomplish GEO SAR imaging with good and uniform imaging quality over the entire swath. PMID:27428974

  18. Phylogenetic turnover during subtropical forest succession across environmental and phylogenetic scales.

    PubMed

    Purschke, Oliver; Michalski, Stefan G; Bruelheide, Helge; Durka, Walter

    2017-12-01

    Although spatial and temporal patterns of phylogenetic community structure during succession are inherently interlinked and assembly processes vary with environmental and phylogenetic scales, successional studies of community assembly have yet to integrate spatial and temporal components of community structure, while accounting for scaling issues. To gain insight into the processes that generate biodiversity after disturbance, we combine analyses of spatial and temporal phylogenetic turnover across phylogenetic scales, accounting for covariation with environmental differences. We compared phylogenetic turnover, at the species- and individual-level, within and between five successional stages, representing woody plant communities in a subtropical forest chronosequence. We decomposed turnover at different phylogenetic depths and assessed its covariation with between-plot abiotic differences. Phylogenetic turnover between stages was low relative to species turnover and was not explained by abiotic differences. However, within the late-successional stages, there was high presence-/absence-based turnover (clustering) that occurred deep in the phylogeny and covaried with environmental differentiation. Our results support a deterministic model of community assembly where (i) phylogenetic composition is constrained through successional time, but (ii) toward late succession, species sorting into preferred habitats according to niche traits that are conserved deep in phylogeny, becomes increasingly important.

  19. Seeing the forest for the homogeneous trees: stand-scale resource distributions emerge from tree-scale structure

    Treesearch

    Suzanne Boyden; Rebecca Montgomery; Peter B. Reich; Brian J. Palik

    2012-01-01

    Forest ecosystem processes depend on local interactions that are modified by the spatial pattern of trees and resources. Effects of resource supplies on processes such as regeneration are increasingly well understood, yet we have few tools to compare resource heterogeneity among forests that differ in structural complexity. We used a neighborhood approach to examine...

  20. Reserve networks based on richness hotspots and representation vary with scale

    Treesearch

    Susan A. Shriner; Kenneth R. Wilson; Curtis H. Flather

    2006-01-01

    While the importance of spatial scale in ecology is well established, few studies have investigated the impact of data grain on conservation planning outcomes. In this study, we compared species richness hotspot and representation networks developed at five grain sizes. We used species distribution maps for mammals and birds developed by the Arizona and New Mexico Gap...

  1. A Multi-Scale Comparative Study of Shape and Sprawl in Metropolitan Regions of the United States

    ERIC Educational Resources Information Center

    Kugler, Tracy A.

    2012-01-01

    This dissertation constitutes a multi-scale quantitative and qualitative investigation of patterns of urban development in metropolitan regions of the United States. This work has generated a comprehensive data set on spatial patterns of metropolitan development in the U.S. and an approach to the study of such patterns that can be used to further…

  2. Crustal evolution inferred from Apollo magnetic measurements

    NASA Technical Reports Server (NTRS)

    Dyal, P.; Daily, W. D.; Vanian, L. L.

    1978-01-01

    The topology of lunar remanent fields is investigated by analyzing simultaneous magnetometer and solar wind spectrometer data. The diffusion model proposed by Vanyan (1977) to describe the field-plasma interaction at the lunar surface is extended to describe the interaction with fields characterized by two scale lengths, and the extended model is compared with data from three Apollo landing sites (Apollo 12, 15 and 16) with crustal fields of differing intensity and topology. Local remanent field properties from this analysis are compared with high spatial resolution magnetic maps obtained from the electron reflection experiment. It is concluded that remanent fields over most of the lunar surface are characterized by spatial variations as small as a few kilometers. Large regions (50 to 100 km) of the lunar crust were probably uniformly magnetized early in the evolution of the crust. Smaller scale (5 to 10 km) magnetic sources close to the surface were left by bombardment and subsequent gardening of the upper layers of these magnetized regions. The small scale sized remanent fields of about 100 gammas are measured by surface experiments, whereas the larger scale sized fields of about 0.1 gammas are measured by the orbiting subsatellite experiments.

  3. A Hierarchical and Dynamic Seascape Framework for Scaling and Comparing Ocean Biodiversity Observations

    NASA Astrophysics Data System (ADS)

    Kavanaugh, M.; Muller-Karger, F. E.; Montes, E.; Santora, J. A.; Chavez, F.; Messié, M.; Doney, S. C.

    2016-02-01

    The pelagic ocean is a complex system in which physical, chemical and biological processes interact to shape patterns on multiple spatial and temporal scales and levels of ecological organization. Monitoring and management of marine seascapes must consider a hierarchical and dynamic mosaic, where the boundaries, extent, and location of features change with time. As part of a Marine Biodiversity Observing Network demonstration project, we conducted a multiscale classification of dynamic coastal seascapes in the northeastern Pacific and Gulf of Mexico using multivariate satellite and modeled data. Synoptic patterns were validated using mooring and ship-based observations that spanned multiple trophic levels and were collected as part of several long-term monitoring programs, including the Monterey Bay and Florida Keys National Marine Sanctuaries. Seascape extent and habitat diversity varied as a function of both seasonal and interannual forcing. We discuss the patterns of in situ observations in the context of seascape dynamics and the effect on rarefaction, spatial patchiness, and tracking and comparing ecosystems through time. A seascape framework presents an effective means to translate local biodiversity measurements to broader spatiotemporal scales, scales relevant for modeling the effects of global change and enabling whole-ecosystem management in the dynamic ocean.

  4. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mishra, U.; Riley, W. J.

    The spatial heterogeneity of land surfaces affects energy, moisture, and greenhouse gas exchanges with the atmosphere. However, representing the heterogeneity of terrestrial hydrological and biogeochemical processes in Earth system models (ESMs) remains a critical scientific challenge. We report the impact of spatial scaling on environmental controls, spatial structure, and statistical properties of soil organic carbon (SOC) stocks across the US state of Alaska. We used soil profile observations and environmental factors such as topography, climate, land cover types, and surficial geology to predict the SOC stocks at a 50 m spatial scale. These spatially heterogeneous estimates provide a data setmore » with reasonable fidelity to the observations at a sufficiently high resolution to examine the environmental controls on the spatial structure of SOC stocks. We upscaled both the predicted SOC stocks and environmental variables from finer to coarser spatial scales ( s = 100, 200, and 500 m and 1, 2, 5, and 10 km) and generated various statistical properties of SOC stock estimates. We found different environmental factors to be statistically significant predictors at different spatial scales. Only elevation, temperature, potential evapotranspiration, and scrub land cover types were significant predictors at all scales. The strengths of control (the median value of geographically weighted regression coefficients) of these four environmental variables on SOC stocks decreased with increasing scale and were accurately represented using mathematical functions ( R 2 = 0.83–0.97). The spatial structure of SOC stocks across Alaska changed with spatial scale. Although the variance (sill) and unstructured variability (nugget) of the calculated variograms of SOC stocks decreased exponentially with scale, the correlation length (range) remained relatively constant across scale. The variance of predicted SOC stocks decreased with spatial scale over the range of 50 m to ~ 500 m, and remained constant beyond this scale. The fitted exponential function accounted for 98 % of variability in the variance of SOC stocks. We found moderately accurate linear relationships between mean and higher-order moments of predicted SOC stocks ( R 2 ∼ 0.55–0.63). Current ESMs operate at coarse spatial scales (50–100 km), and are therefore unable to represent environmental controllers and spatial heterogeneity of high-latitude SOC stocks consistent with observations. We conclude that improved understanding of the scaling behavior of environmental controls and statistical properties of SOC stocks could improve ESM land model benchmarking and perhaps allow representation of spatial heterogeneity of biogeochemistry at scales finer than those currently resolved by ESMs.« less

  5. Overview of the Bushland Evapotranspiration and Agricultural Remote sensing EXperiment 2008 (BEAREX08): A field experiment evaluating methods for quantifying ET at multiple scales

    NASA Astrophysics Data System (ADS)

    Evett, Steven R.; Kustas, William P.; Gowda, Prasanna H.; Anderson, Martha C.; Prueger, John H.; Howell, Terry A.

    2012-12-01

    In 2008, scientists from seven federal and state institutions worked together to investigate temporal and spatial variations of evapotranspiration (ET) and surface energy balance in a semi-arid irrigated and dryland agricultural region of the Southern High Plains in the Texas Panhandle. This Bushland Evapotranspiration and Agricultural Remote sensing EXperiment 2008 (BEAREX08) involved determination of micrometeorological fluxes (surface energy balance) in four weighing lysimeter fields (each 4.7 ha) containing irrigated and dryland cotton and in nearby bare soil, wheat stubble and rangeland fields using nine eddy covariance stations, three large aperture scintillometers, and three Bowen ratio systems. In coordination with satellite overpasses, flux and remote sensing aircraft flew transects over the surrounding fields and region encompassing an area contributing fluxes from 10 to 30 km upwind of the USDA-ARS lysimeter site. Tethered balloon soundings were conducted over the irrigated fields to investigate the effect of advection on local boundary layer development. Local ET was measured using four large weighing lysimeters, while field scale estimates were made by soil water balance with a network of neutron probe profile water sites and from the stationary flux systems. Aircraft and satellite imagery were obtained at different spatial and temporal resolutions. Plot-scale experiments dealt with row orientation and crop height effects on spatial and temporal patterns of soil surface temperature, soil water content, soil heat flux, evaporation from soil in the interrow, plant transpiration and canopy and soil radiation fluxes. The BEAREX08 field experiment was unique in its assessment of ET fluxes over a broad range in spatial scales; comparing direct and indirect methods at local scales with remote sensing based methods and models using aircraft and satellite imagery at local to regional scales, and comparing mass balance-based ET ground truth with eddy covariance and remote sensing-based methods. Here we present an overview of the experiment and a summary of preliminary findings described in this special issue of AWR. Our understanding of the role of advection in the measurement and modeling of ET is advanced by these papers integrating measurements and model estimates.

  6. Studying neighborhood crime across different macro spatial scales: The case of robbery in 4 cities.

    PubMed

    Hipp, John R; Wo, James C; Kim, Young-An

    2017-11-01

    Whereas there is a burgeoning literature focusing on the spatial distribution of crime events across neighborhoods or micro-geographic units in a specific city, the present study expands this line of research by selecting four cities that vary across two macro-spatial dimensions: population in the micro-environment, and population in the broader macro-environment. We assess the relationship between measures constructed at different spatial scales and robbery rates in blocks in four cities: 1) San Francisco (high in micro- and macro-environment population); 2) Honolulu (high in micro- but low in macro-environment population); 3) Los Angeles (low in micro- but high in macro-environment population); 4) Sacramento (low in micro- and macro-environment population). Whereas the socio-demographic characteristics of residents further than ½ mile away do not impact robbery rates, the number of people up to 2.5 miles away are related to robbery rates, especially in the two cities with smaller micro-environment population, implying a larger spatial scale than is often considered. The results show that coefficient estimates differ somewhat more between cities differing in micro-environment population compared to those differing based on macro-environment population. It is therefore necessary to consider the broader macro-environment even when focusing on the level of crime across neighborhoods or micro-geographic units within an area. Copyright © 2017 Elsevier Inc. All rights reserved.

  7. New spatial and temporal indices of Indian summer monsoon rainfall

    NASA Astrophysics Data System (ADS)

    Dwivedi, Sanjeev; Uma, R.; Lakshmi Kumar, T. V.; Narayanan, M. S.; Pokhrel, Samir; Kripalani, R. H.

    2018-02-01

    The overall yearly seasonal performance of Indian southwest monsoon rainfall (ISMR) for the whole Indian land mass is presently expressed by the India Meteorological Department (IMD) by a single number, the total quantum of rainfall. Any particular year is declared as excess/deficit or normal monsoon rainfall year on the basis of this single number. It is well known that monsoon rainfall also has high interannual variability in spatial and temporal scales. To account for these aspects in ISMR, we propose two new spatial and temporal indices. These indices have been calculated using the 115 years of IMD daily 0.25° × 0.25° gridded rainfall data. Both indices seem to go in tandem with the in vogue seasonal quantum index. The anomaly analysis indicates that the indices during excess monsoon years behave randomly, while for deficit monsoon years the phase of all the three indices is the same. Evaluation of these indices is also studied with respect to the existing dynamical indices based on large-scale circulation. It is found that the new temporal indices have better link with circulation indices as compared to the new spatial indices. El Nino and Southern Oscillation (ENSO) especially over the equatorial Pacific Ocean still have the largest influence in both the new indices. However, temporal indices have much better remote influence as compared to that of spatial indices. Linkages over the Indian Ocean regions are very different in both the spatial and temporal indices. Continuous wavelet transform (CWT) analysis indicates that the complete spectrum of oscillation of the QI is shared in the lower oscillation band by the spatial index and in the higher oscillation band by the temporal index. These new indices may give some extra dimension to study Indian summer monsoon variability.

  8. China's Air Quality and Respiratory Disease Mortality Based on the Spatial Panel Model.

    PubMed

    Cao, Qilong; Liang, Ying; Niu, Xueting

    2017-09-18

    Background : Air pollution has become an important factor restricting China's economic development and has subsequently brought a series of social problems, including the impact of air pollution on the health of residents, which is a topical issue in China. Methods : Taking into account this spatial imbalance, the paper is based on the spatial panel data model PM 2.5 . Respiratory disease mortality in 31 Chinese provinces from 2004 to 2008 is taken as the main variable to study the spatial effect and impact of air quality and respiratory disease mortality on a large scale. Results : It was found that there is a spatial correlation between the mortality of respiratory diseases in Chinese provinces. The spatial correlation can be explained by the spatial effect of PM 2.5 pollutions in the control of other variables. Conclusions : Compared with the traditional non-spatial model, the spatial model is better for describing the spatial relationship between variables, ensuring the conclusions are scientific and can measure the spatial effect between variables.

  9. A Physically Based Runoff Routing Model for Land Surface and Earth System Models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, Hongyi; Wigmosta, Mark S.; Wu, Huan

    2013-06-13

    A new physically based runoff routing model, called the Model for Scale Adaptive River Transport (MOSART), has been developed to be applicable across local, regional, and global scales. Within each spatial unit, surface runoff is first routed across hillslopes and then discharged along with subsurface runoff into a ‘‘tributary subnetwork’’ before entering the main channel. The spatial units are thus linked via routing through the main channel network, which is constructed in a scale-consistent way across different spatial resolutions. All model parameters are physically based, and only a small subset requires calibration.MOSART has been applied to the Columbia River basinmore » at 1/ 168, 1/ 88, 1/ 48, and 1/ 28 spatial resolutions and was evaluated using naturalized or observed streamflow at a number of gauge stations. MOSART is compared to two other routing models widely used with land surface models, the River Transport Model (RTM) in the Community Land Model (CLM) and the Lohmann routing model, included as a postprocessor in the Variable Infiltration Capacity (VIC) model package, yielding consistent performance at multiple resolutions. MOSART is further evaluated using the channel velocities derived from field measurements or a hydraulic model at various locations and is shown to be capable of producing the seasonal variation and magnitude of channel velocities reasonably well at different resolutions. Moreover, the impacts of spatial resolution on model simulations are systematically examined at local and regional scales. Finally, the limitations ofMOSART and future directions for improvements are discussed.« less

  10. Estimating planktonic diversity through spatial dominance patterns in a model ocean.

    PubMed

    Soccodato, Alice; d'Ovidio, Francesco; Lévy, Marina; Jahn, Oliver; Follows, Michael J; De Monte, Silvia

    2016-10-01

    In the open ocean, the observation and quantification of biodiversity patterns is challenging. Marine ecosystems are indeed largely composed by microbial planktonic communities whose niches are affected by highly dynamical physico-chemical conditions, and whose observation requires advanced methods for morphological and molecular classification. Optical remote sensing offers an appealing complement to these in-situ techniques. Global-scale coverage at high spatiotemporal resolution is however achieved at the cost of restrained information on the local assemblage. Here, we use a coupled physical and ecological model ocean simulation to explore one possible metrics for comparing measures performed on such different scales. We show that a large part of the local diversity of the virtual plankton ecosystem - corresponding to what accessible by genomic methods - can be inferred from crude, but spatially extended, information - as conveyed by remote sensing. Shannon diversity of the local community is indeed highly correlated to a 'seascape' index, which quantifies the surrounding spatial heterogeneity of the most abundant functional group. The error implied in drastically reducing the resolution of the plankton community is shown to be smaller in frontal regions as well as in regions of intermediate turbulent energy. On the spatial scale of hundreds of kms, patterns of virtual plankton diversity are thus largely sustained by mixing communities that occupy adjacent niches. We provide a proof of principle that in the open ocean information on spatial variability of communities can compensate for limited local knowledge, suggesting the possibility of integrating in-situ and satellite observations to monitor biodiversity distribution at the global scale. Copyright © 2016 Elsevier B.V. All rights reserved.

  11. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Xiao, Kai; Ma, Ying -Zhong; Simpson, Mary Jane

    Charge carrier trapping degrades the performance of organometallic halide perovskite solar cells. To characterize the locations of electronic trap states in a heterogeneous photoactive layer, a spatially resolved approach is essential. Here, we report a comparative study on methylammonium lead tri-iodide perovskite thin films subject to different thermal annealing times using a combined photoluminescence (PL) and femtosecond transient absorption microscopy (TAM) approach to spatially map trap states. This approach coregisters the initially populated electronic excited states with the regions that recombine radiatively. Although the TAM images are relatively homogeneous for both samples, the corresponding PL images are highly structured. Themore » remarkable variation in the PL intensities as compared to transient absorption signal amplitude suggests spatially dependent PL quantum efficiency, indicative of trapping events. Furthermore, detailed analysis enables identification of two trapping regimes: a densely packed trapping region and a sparse trapping area that appear as unique spatial features in scaled PL maps.« less

  12. Detecting vegetation cover change on the summit of Cadillac Mountain using multi-temporal remote sensing datasets: 1979, 2001, and 2007.

    PubMed

    Kim, Min-Kook; Daigle, John J

    2011-09-01

    This study examines the efficacy of management strategies implemented in 2000 to reduce visitor-induced vegetation impact and enhance vegetation recovery at the summit loop trail on Cadillac Mountain at Acadia National Park, Maine. Using single-spectral high-resolution remote sensing datasets captured in 1979, 2001, and 2007, pre-classification change detection analysis techniques were applied to measure fractional vegetation cover changes between the time periods. This popular sub-alpine summit with low-lying vegetation and attractive granite outcroppings experiences dispersed visitor use away from the designated trail, so three pre-defined spatial scales (small, 0-30 m; medium, 0-60 m; and large, 0-90 m) were examined in the vicinity of the summit loop trail with visitor use (experimental site) and a site chosen nearby in a relatively pristine undisturbed area (control site) with similar spatial scales. Results reveal significant changes in terms of rates of vegetation impact between 1979 and 2001 extending out to 90 m from the summit loop trail with no management at the site. No significant differences were detected among three spatial zones (inner, 0-30 m; middle, 30-60 m; and outer, 60-90 m) at the experimental site, but all were significantly higher rates of impact compared to similar spatial scales at the control site (all p < 0.001). In contrast, significant changes in rates of recovery between 2001 and 2007 were observed in the medium and large spatial scales at the experimental site under management as compared to the control site (all p < 0.05). Also during this later period a higher rate of recovery was observed in the outer zone as compared to the inner zone at the experimental site (p < 0.05). The overall study results suggest a trend in the desired direction for the site and visitor management strategies designed to reduce vegetation impact and enhance vegetation recovery at the summit loop trail of Cadillac Mountain since 2000. However, the vegetation recovery has been rather minimal and did not reach the level of cover observed during the 1979 time period. In addition, the advantages and some limitations of using remote sensing technologies are discussed in detecting vegetation change in this setting and potential application to other recreation settings.

  13. The combined effects of exogenous and endogenous variability on the spatial distribution of ant communities in a forested ecosystem (Hymenoptera: Formicidae).

    PubMed

    Yitbarek, Senay; Vandermeer, John H; Allen, David

    2011-10-01

    Spatial patterns observed in ecosystems have traditionally been attributed to exogenous processes. Recently, ecologists have found that endogenous processes also have the potential to create spatial patterns. Yet, relatively few studies have attempted to examine the combined effects of exogenous and endogenous processes on the distribution of organisms across spatial and temporal scales. Here we aim to do this, by investigating whether spatial patterns of under-story tree species at a large spatial scale (18 ha) influences the spatial patterns of ground foraging ant species at a much smaller spatial scale (20 m by 20 m). At the regional scale, exogenous processes (under-story tree community) had a strong effect on the spatial patterns in the ground-foraging ant community. We found significantly more Camponotus noveboracensis, Formica subsericae, and Lasius alienus species in black cherry (Prunis serotine Ehrh.) habitats. In witch-hazel (Hamamelis virginiana L.) habitats, we similarly found significantly more Myrmica americana, Formica fusca, and Formica subsericae. At smaller spatial scales, we observed the emergence of mosaic ant patches changing rapidly in space and time. Our study reveals that spatial patterns are the result of both exogenous and endogenous forces, operating at distinct scales.

  14. Spatial and Temporal Patterns of Suspended Sediment Yields in Nested Urban Catchments

    NASA Astrophysics Data System (ADS)

    Kemper, J. T.; Miller, A. J.; Welty, C.

    2017-12-01

    In a highly regulated area such as the Chesapeake Bay watershed, suspended sediment is a matter of primary concern. Near real-time turbidity and discharge data have been collected continuously for more than four years at five stream gages representing three nested watershed scales (1-2 sq km, 5-6 sq km, 14 sq km) in the highly impervious Dead Run watershed, located in Baltimore County, MD. Using turbidity-concentration relationships based on sample analyses at the gage site, sediment yields for each station can be quantified for a variety of temporal scales. Sediment yields have been calculated for 60+ different storms across four years. Yields show significant spatial variation, both at equivalent sub-watershed scales and from headwaters to mouth. Yields are higher at the headwater station with older development and virtually no stormwater management (DR5) than at the station with more recent development and more extensive stormwater management (DR2). However, this pattern is reversed for the stations at the next larger scale: yields are lower at DR4, downstream of DR5, than at DR3, downstream of DR2. This suggests spatial variation in the dominant sediment sources within each subwatershed. Additionally, C-Q hysteresis curves display consistent counterclockwise behavior at the DR4 station, in contrast to the consistent clockwise behavior displayed at the DR3 station. This further suggests variation in dominant sediment sources (perhaps distal vs local, respectively). We observe consistent seasonal trends in the relative magnitudes of sediment yield for different subwatersheds (e.g. DR3>DR4 in summer, DR5>DR2 in spring). We also observe significant year-to-year variation in sediment yield at the headwater and intermediate scales, whereas yields at the 14 sq km scale are largely similar across the monitored years. This observation would be consistent with the possibility that internal storage and remobilization tend to modulate downstream yields even with spatial and temporal variation in upstream sources. The fine-scale design of this study represents a unique opportunity to compare and contrast sediment yields across a variety of spatial and temporal scales, and provide insight into sediment transport dynamics within an urbanized watershed.

  15. Connecting spatial and temporal scales of tropical precipitation in observations and the MetUM-GA6

    NASA Astrophysics Data System (ADS)

    Martin, Gill M.; Klingaman, Nicholas P.; Moise, Aurel F.

    2017-01-01

    This study analyses tropical rainfall variability (on a range of temporal and spatial scales) in a set of parallel Met Office Unified Model (MetUM) simulations at a range of horizontal resolutions, which are compared with two satellite-derived rainfall datasets. We focus on the shorter scales, i.e. from the native grid and time step of the model through sub-daily to seasonal, since previous studies have paid relatively little attention to sub-daily rainfall variability and how this feeds through to longer scales. We find that the behaviour of the deep convection parametrization in this model on the native grid and time step is largely independent of the grid-box size and time step length over which it operates. There is also little difference in the rainfall variability on larger/longer spatial/temporal scales. Tropical convection in the model on the native grid/time step is spatially and temporally intermittent, producing very large rainfall amounts interspersed with grid boxes/time steps of little or no rain. In contrast, switching off the deep convection parametrization, albeit at an unrealistic resolution for resolving tropical convection, results in very persistent (for limited periods), but very sporadic, rainfall. In both cases, spatial and temporal averaging smoothes out this intermittency. On the ˜ 100 km scale, for oceanic regions, the spectra of 3-hourly and daily mean rainfall in the configurations with parametrized convection agree fairly well with those from satellite-derived rainfall estimates, while at ˜ 10-day timescales the averages are overestimated, indicating a lack of intra-seasonal variability. Over tropical land the results are more varied, but the model often underestimates the daily mean rainfall (partly as a result of a poor diurnal cycle) but still lacks variability on intra-seasonal timescales. Ultimately, such work will shed light on how uncertainties in modelling small-/short-scale processes relate to uncertainty in climate change projections of rainfall distribution and variability, with a view to reducing such uncertainty through improved modelling of small-/short-scale processes.

  16. Effects of Fine-Scale Landscape Variability on Satellite-Derived Land Surface Temperature Products Over Sparse Vegetation Canopies

    NASA Astrophysics Data System (ADS)

    Powell, R. L.; Goulden, M.; Peterson, S.; Roberts, D. A.; Still, C. J.

    2015-12-01

    Temperature is a primary environmental control on biological systems and processes at a range of spatial and temporal scales, from controlling biochemical processes such as photosynthesis to influencing continental-scale species distribution. The Landsat satellite series provides a long record (since the mid-1980s) of relatively high spatial resolution thermal infrared (TIR) imagery, from which we derive land surface temperature (LST) grids. Here, we investigate fine spatial resolution factors that influence Landsat-derived LST over a spectrally and spatially heterogeneous landscape. We focus on paired sites (inside/outside a 1994 fire scar) within a pinyon-juniper scrubland in Southern California. The sites have nearly identical micro-meteorology and vegetation species composition, but distinctly different vegetation abundance and structure. The tower at the unburned site includes a number of in-situ imaging tools to quantify vegetation properties, including a thermal camera on a pan-tilt mount, allowing hourly characterization of landscape component temperatures (e.g., sunlit canopy, bare soil, leaf litter). We use these in-situ measurements to assess the impact of fine-scale landscape heterogeneity on estimates of LST, including sensitivity to (i) the relative abundance of component materials, (ii) directional effects due to solar and viewing geometry, (iii) duration of sunlit exposure for each compositional type, and (iv) air temperature. To scale these properties to Landsat spatial resolution (~100-m), we characterize the sub-pixel composition of landscape components (in addition to shade) by applying spectral mixture analysis (SMA) to the Landsat Operational Land Imager (OLI) spectral bands and test the sensitivity of the relationships established with the in-situ data at this coarser scale. The effects of vegetation abundance and cover height versus other controls on satellite-derived estimates of LST will be assessed by comparing estimates at the burned vs. unburned sites across multiple seasons (~30 dates).

  17. Cross-scale feedbacks and scale mismatches as influences on cultural services and the resilience of protected areas.

    PubMed

    Maciejewski, Kristine; De Vos, Alta; Cumming, Graeme S; Moore, Christine; Biggs, Duan

    2015-01-01

    Protected areas are a central strategy for achieving global conservation goals, but their continued existence depends heavily on maintaining sufficient social and political support to outweigh economic interests or other motives for land conversion. Thus, the resilience of protected areas can be considered a function of their perceived benefits to society. Nature-based tourism (NBT), a cultural ecosystem service, provides a key source of income to protected areas, facilitating a sustainable solution to conservation. The ability of tourism to generate income depends, however, on both the scales at which this cultural service is provided and the scales at which tourists respond to services on offer. This observation raises a set of location-, context-, and scale-related questions that need to be confronted before we can understand and value cultural service provision appropriately. We combine elements of resilience analysis with a systems ecology framework and apply this to NBT in protected areas to investigate cross-scale interactions and scale mismatches. We postulate that cross-scale effects can either have a positive effect on protected area resilience or lead to scale mismatches, depending on their interactions with cross-scale feedbacks. To demonstrate this, we compare spatial scales and nested levels of institutions to develop a typology of scale mismatches for common scenarios in NBT. In our new typology, the severity of a scale mismatch is expressed as the ratio of spatial scale to institutional level, producing 25 possible outcomes with differing consequences for system resilience. We predict that greater differences between interacting scales and levels, and greater magnitudes of cross-scale interactions, will lead to greater magnitudes of scale mismatch. Achieving a better understanding of feedbacks and mismatches, and finding ways of aligning spatial and institutional scales, will be critical for strengthening the resilience of protected areas that depend on NBT.

  18. Evaluation of Aquarius Version-5 Sea Surface Salinity on various spatial and temporal scales

    NASA Astrophysics Data System (ADS)

    Lee, T.

    2017-12-01

    Sea surface salinity (SSS) products from Aquarius have had three public releases with progressive improvement in data quality: Versions 2, 3, and 4, with the last one being released in October 2015. A systematic assessment of the Version-4, Level-3 Aquarius SSS product was performed on various spatial and temporal scales by comparing it with gridded Argo products (Lee 2016, Geophys. Res. Lett.). The comparison showed that the consistency of Aquarius Version-4 SSS with gridded Argo products is comparable to that between two different gridded Argo products. However, significant seasonal biases remain in high-latitude oceans. Further improvements are being made by the Aquarius team. Aquarius Version 5.0 SSS is scheduled to be released in October 2017 as the final version of the Aquarius Project. This presentation provides a similar evaluation of Version-5 SSS as reported by Lee (2016) and contrast it with the current Version-4 SSS.

  19. Landscapes and environments on the island of Ouessant, Brittany, France: From traditional maintenance to the management of abandoned areas

    NASA Astrophysics Data System (ADS)

    Brigand, Louis; Bioret, Frédéric; Le Démezet, Maurice

    1992-09-01

    For about 50 years the desertion of areas by traditional activities has led to an important evolution of landscapes and environments on the island of Ouessant. The study of this evolution has been undertaken at different spatial and temporal scales. On one part of the island, a scientific investigation carried out at the scale of the parcel enabled the form of the landscape in 1850 to be compared with that of 1985. On the whole island, the evolution of spatial organization and land use was compared between 1950 and 1985. For each of three main ecological environments, vegetational successions after the decrease of agriculture have been studied along with their future potential changes. This work highlights some considerations about the present management of the environment in relation to the major objectives of island environmental policies.

  20. Large-Scale Brain Networks Supporting Divided Attention across Spatial Locations and Sensory Modalities

    PubMed Central

    Santangelo, Valerio

    2018-01-01

    Higher-order cognitive processes were shown to rely on the interplay between large-scale neural networks. However, brain networks involved with the capability to split attentional resource over multiple spatial locations and multiple stimuli or sensory modalities have been largely unexplored to date. Here I re-analyzed data from Santangelo et al. (2010) to explore the causal interactions between large-scale brain networks during divided attention. During fMRI scanning, participants monitored streams of visual and/or auditory stimuli in one or two spatial locations for detection of occasional targets. This design allowed comparing a condition in which participants monitored one stimulus/modality (either visual or auditory) in two spatial locations vs. a condition in which participants monitored two stimuli/modalities (both visual and auditory) in one spatial location. The analysis of the independent components (ICs) revealed that dividing attentional resources across two spatial locations necessitated a brain network involving the left ventro- and dorso-lateral prefrontal cortex plus the posterior parietal cortex, including the intraparietal sulcus (IPS) and the angular gyrus, bilaterally. The analysis of Granger causality highlighted that the activity of lateral prefrontal regions were predictive of the activity of all of the posteriors parietal nodes. By contrast, dividing attention across two sensory modalities necessitated a brain network including nodes belonging to the dorsal frontoparietal network, i.e., the bilateral frontal eye-fields (FEF) and IPS, plus nodes belonging to the salience network, i.e., the anterior cingulated cortex and the left and right anterior insular cortex (aIC). The analysis of Granger causality highlights a tight interdependence between the dorsal frontoparietal and salience nodes in trials requiring divided attention between different sensory modalities. The current findings therefore highlighted a dissociation among brain networks implicated during divided attention across spatial locations and sensory modalities, pointing out the importance of investigating effective connectivity of large-scale brain networks supporting complex behavior. PMID:29535614

  1. Large-Scale Brain Networks Supporting Divided Attention across Spatial Locations and Sensory Modalities.

    PubMed

    Santangelo, Valerio

    2018-01-01

    Higher-order cognitive processes were shown to rely on the interplay between large-scale neural networks. However, brain networks involved with the capability to split attentional resource over multiple spatial locations and multiple stimuli or sensory modalities have been largely unexplored to date. Here I re-analyzed data from Santangelo et al. (2010) to explore the causal interactions between large-scale brain networks during divided attention. During fMRI scanning, participants monitored streams of visual and/or auditory stimuli in one or two spatial locations for detection of occasional targets. This design allowed comparing a condition in which participants monitored one stimulus/modality (either visual or auditory) in two spatial locations vs. a condition in which participants monitored two stimuli/modalities (both visual and auditory) in one spatial location. The analysis of the independent components (ICs) revealed that dividing attentional resources across two spatial locations necessitated a brain network involving the left ventro- and dorso-lateral prefrontal cortex plus the posterior parietal cortex, including the intraparietal sulcus (IPS) and the angular gyrus, bilaterally. The analysis of Granger causality highlighted that the activity of lateral prefrontal regions were predictive of the activity of all of the posteriors parietal nodes. By contrast, dividing attention across two sensory modalities necessitated a brain network including nodes belonging to the dorsal frontoparietal network, i.e., the bilateral frontal eye-fields (FEF) and IPS, plus nodes belonging to the salience network, i.e., the anterior cingulated cortex and the left and right anterior insular cortex (aIC). The analysis of Granger causality highlights a tight interdependence between the dorsal frontoparietal and salience nodes in trials requiring divided attention between different sensory modalities. The current findings therefore highlighted a dissociation among brain networks implicated during divided attention across spatial locations and sensory modalities, pointing out the importance of investigating effective connectivity of large-scale brain networks supporting complex behavior.

  2. Perception of scale in forest management planning: Challenges and implications

    Treesearch

    Swee May Tang; Eric J. Gustafson

    1997-01-01

    Forest management practices imposed at one spatial scale may affect the patterns and processes of ecosystems at other scales. These impacts and feedbacks on the functioning of ecosystems across spatial scales are not well understood. We examined the effects of silvicultural manipulations simulated at two spatial scales of management planning on landscape pattern and...

  3. Examining fire-induced forest changes using novel remote sensing technique: a case study in a mixed pine-oak forest

    NASA Astrophysics Data System (ADS)

    Meng, R.; Wu, J.; Zhao, F. R.; Cook, B.; Hanavan, R. P.; Serbin, S.

    2017-12-01

    Fire-induced forest changes has long been a central focus for forest ecology and global carbon cycling studies, and is becoming a pressing issue for global change biologists particularly with the projected increases in the frequency and intensity of fire with a warmer and drier climate. Compared with time-consuming and labor intensive field-based approaches, remote sensing offers a promising way to efficiently assess fire effects and monitor post-fire forest responses across a range of spatial and temporal scales. However, traditional remote sensing studies relying on simple optical spectral indices or coarse resolution imagery still face a number of technical challenges, including confusion or contamination of the signal by understory dynamics and mixed pixels with moderate to coarse resolution data (>= 30 m). As such, traditional remote sensing may not meet the increasing demand for more ecologically-meaningful monitoring and quantitation of fire-induced forest changes. Here we examined the use of novel remote sensing technique (i.e. airborne imaging spectroscopy and LiDAR measurement, very high spatial resolution (VHR) space-borne multi-spectral measurement, and high temporal-spatial resolution UAS-based (Unmanned Aerial System) imagery), in combination with field and phenocam measurements to map forest burn severity across spatial scales, quantify crown-scale post-fire forest recovery rate, and track fire-induced phenology changes in the burned areas. We focused on a mixed pine-oak forest undergoing multiple fire disturbances for the past several years in Long Island, NY as a case study. We demonstrate that (1) forest burn severity mapping from VHR remote sensing measurement can capture crown-scale heterogeneous fire patterns over large-scale; (2) the combination of VHR optical and structural measurements provides an efficient means to remotely sense species-level post-fire forest responses; (3) the UAS-based remote sensing enables monitoring of fire-induced forest phenology changes at unprecedented temporal and spatial resolutions. This work provides the methodological approach monitor fire-induced forest changes in a spatially explicit manner across scales, with important implications for fire-related forest management and for constraining/benchmarking process models.

  4. Density dependence, spatial scale and patterning in sessile biota.

    PubMed

    Gascoigne, Joanna C; Beadman, Helen A; Saurel, Camille; Kaiser, Michel J

    2005-09-01

    Sessile biota can compete with or facilitate each other, and the interaction of facilitation and competition at different spatial scales is key to developing spatial patchiness and patterning. We examined density and scale dependence in a patterned, soft sediment mussel bed. We followed mussel growth and density at two spatial scales separated by four orders of magnitude. In summer, competition was important at both scales. In winter, there was net facilitation at the small scale with no evidence of density dependence at the large scale. The mechanism for facilitation is probably density dependent protection from wave dislodgement. Intraspecific interactions in soft sediment mussel beds thus vary both temporally and spatially. Our data support the idea that pattern formation in ecological systems arises from competition at large scales and facilitation at smaller scales, so far only shown in vegetation systems. The data, and a simple, heuristic model, also suggest that facilitative interactions in sessile biota are mediated by physical stress, and that interactions change in strength and sign along a spatial or temporal gradient of physical stress.

  5. Speciation of Soil Phosphorus Assessed by XANES Spectroscopy at Different Spatial Scales

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hesterberg, Dean; McNulty, Ian; Thieme, Juergen

    Precise management of soil phosphorus (P) to meet competing demands of agriculture and environmental protection can benefit from more comprehensive characterization of P speciation in soils. Our objectives were to provide spatial context for spectroscopic analyses of soil P speciation in relation to molecular-scale species and landscape-scale management of P, and to compare soil P-species diversity from spectroscopic measurements at submicron and millimeter scales. The spatial range of ~26 orders of magnitude between atomic and field scales presents a challenge to upscaling and downscaling information from spectroscopic analyses of soils. Scanning fluorescence X-ray microscopy images of a 50-mm ´ 45-mmmore » area of an organic soil sample showed heterogeneous distributions of P, Al, and Si. Microscale X-ray absorption near edge structure (μ-XANES) spectra collected at the P K-edge from 12 spots on the soil sample exhibited diverse features that indicated variations in highly localized P speciation. Linear combination fitting analysis of the μ-XANES spectra included various proportions of three standards that appeared in fits for most spots and five standards that appeared in fits for one spot each. The fit to a bulk-soil spectrum was dominated by two of the common standards in the μ-XANES fits, and a fit to the sum of m-XANES spectra included four of the standards. Lastly, these results illustrate a gain in P species sensitivity from spatially resolved XANES analysis. Integrating spectroscopic analyses from multiple scales determines soil P species diversity and will ultimately help connect speciation to the chemical reactivity and mobility of P in soils.« less

  6. Speciation of Soil Phosphorus Assessed by XANES Spectroscopy at Different Spatial Scales

    DOE PAGES

    Hesterberg, Dean; McNulty, Ian; Thieme, Juergen

    2017-07-27

    Precise management of soil phosphorus (P) to meet competing demands of agriculture and environmental protection can benefit from more comprehensive characterization of P speciation in soils. Our objectives were to provide spatial context for spectroscopic analyses of soil P speciation in relation to molecular-scale species and landscape-scale management of P, and to compare soil P-species diversity from spectroscopic measurements at submicron and millimeter scales. The spatial range of ~26 orders of magnitude between atomic and field scales presents a challenge to upscaling and downscaling information from spectroscopic analyses of soils. Scanning fluorescence X-ray microscopy images of a 50-mm ´ 45-mmmore » area of an organic soil sample showed heterogeneous distributions of P, Al, and Si. Microscale X-ray absorption near edge structure (μ-XANES) spectra collected at the P K-edge from 12 spots on the soil sample exhibited diverse features that indicated variations in highly localized P speciation. Linear combination fitting analysis of the μ-XANES spectra included various proportions of three standards that appeared in fits for most spots and five standards that appeared in fits for one spot each. The fit to a bulk-soil spectrum was dominated by two of the common standards in the μ-XANES fits, and a fit to the sum of m-XANES spectra included four of the standards. Lastly, these results illustrate a gain in P species sensitivity from spatially resolved XANES analysis. Integrating spectroscopic analyses from multiple scales determines soil P species diversity and will ultimately help connect speciation to the chemical reactivity and mobility of P in soils.« less

  7. Spatial consistency of Chinook salmon redd distribution within and among years in the Cowlitz River, Washington

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Klett, Katherine J.; Torgersen, Christian; Henning, Julie

    2013-04-28

    We investigated the spawning patterns of Chinook salmon Oncorhynchus tshawytscha on the lower Cowlitz River, Washington (USA) using a unique set of fine- and coarse-scale 35 temporal and spatial data collected during bi-weekly aerial surveys conducted in 1991-2009 (500 m to 28 km resolution) and 2008-2009 (100-500 m resolution). Redd locations were mapped from a helicopter during 2008 and 2009 with a hand-held global positioning system (GPS) synchronized with in-flight audio recordings. We examined spatial patterns of Chinook salmon redd reoccupation among and within years in relation to segment-scale geomorphic features. Chinook salmon spawned in the same sections each yearmore » with little variation among years. On a coarse scale, five years (1993, 1998, 2000, 2002, and 2009) were compared for reoccupation. Redd locations were highly correlated among years resulting in a minimum correlation coefficient of 0.90 (adjusted P = 0.002). Comparisons on a fine scale (500 m) between 2008 and 2009 also revealed a high degree of consistency among redd locations (P < 0.001). On a finer temporal scale, we observed that salmon spawned in the same sections during the first and last week (2008: P < 0.02; and 2009: P < 0.001). Redds were clustered in both 2008 and 2009 (P < 0.001). Regression analysis with a generalized linear model at the 500-m scale indicated that river kilometer and channel bifurcation were positively associated with redd density, whereas sinuosity was negatively associated with redd density. Collecting data on specific redd locations with a GPS during aerial surveys was logistically feasible and cost effective and greatly enhanced the spatial precision of Chinook salmon spawning surveys.« less

  8. Quantifying spatial scaling patterns and their local and regional correlates in headwater streams: Implications for resilience

    USGS Publications Warehouse

    Gothe, Emma; Sandin, Leonard; Allen, Craig R.; Angeler, David G.

    2014-01-01

    The distribution of functional traits within and across spatiotemporal scales has been used to quantify and infer the relative resilience across ecosystems. We use explicit spatial modeling to evaluate within- and cross-scale redundancy in headwater streams, an ecosystem type with a hierarchical and dendritic network structure. We assessed the cross-scale distribution of functional feeding groups of benthic invertebrates in Swedish headwater streams during two seasons. We evaluated functional metrics, i.e., Shannon diversity, richness, and evenness, and the degree of redundancy within and across modeled spatial scales for individual feeding groups. We also estimated the correlates of environmental versus spatial factors of both functional composition and the taxonomic composition of functional groups for each spatial scale identified. Measures of functional diversity and within-scale redundancy of functions were similar during both seasons, but both within- and cross-scale redundancy were low. This apparent low redundancy was partly attributable to a few dominant taxa explaining the spatial models. However, rare taxa with stochastic spatial distributions might provide additional information and should therefore be considered explicitly for complementing future resilience assessments. Otherwise, resilience may be underestimated. Finally, both environmental and spatial factors correlated with the scale-specific functional and taxonomic composition. This finding suggests that resilience in stream networks emerges as a function of not only local conditions but also regional factors such as habitat connectivity and invertebrate dispersal.

  9. Perception of differences in naturalistic dynamic scenes, and a V1-based model.

    PubMed

    To, Michelle P S; Gilchrist, Iain D; Tolhurst, David J

    2015-01-16

    We investigate whether a computational model of V1 can predict how observers rate perceptual differences between paired movie clips of natural scenes. Observers viewed 198 pairs of movies clips, rating how different the two clips appeared to them on a magnitude scale. Sixty-six of the movie pairs were naturalistic and those remaining were low-pass or high-pass spatially filtered versions of those originals. We examined three ways of comparing a movie pair. The Spatial Model compared corresponding frames between each movie pairwise, combining those differences using Minkowski summation. The Temporal Model compared successive frames within each movie, summed those differences for each movie, and then compared the overall differences between the paired movies. The Ordered-Temporal Model combined elements from both models, and yielded the single strongest predictions of observers' ratings. We modeled naturalistic sustained and transient impulse functions and compared frames directly with no temporal filtering. Overall, modeling naturalistic temporal filtering improved the models' performance; in particular, the predictions of the ratings for low-pass spatially filtered movies were much improved by employing a transient impulse function. The correlations between model predictions and observers' ratings rose from 0.507 without temporal filtering to 0.759 (p = 0.01%) when realistic impulses were included. The sustained impulse function and the Spatial Model carried more weight in ratings for normal and high-pass movies, whereas the transient impulse function with the Ordered-Temporal Model was most important for spatially low-pass movies. This is consistent with models in which high spatial frequency channels with sustained responses primarily code for spatial details in movies, while low spatial frequency channels with transient responses code for dynamic events. © 2015 ARVO.

  10. Multiple regression and inverse moments improve the characterization of the spatial scaling behavior of daily streamflows in the Southeast United States

    USGS Publications Warehouse

    Farmer, William H.; Over, Thomas M.; Vogel, Richard M.

    2015-01-01

    Understanding the spatial structure of daily streamflow is essential for managing freshwater resources, especially in poorly-gaged regions. Spatial scaling assumptions are common in flood frequency prediction (e.g., index-flood method) and the prediction of continuous streamflow at ungaged sites (e.g. drainage-area ratio), with simple scaling by drainage area being the most common assumption. In this study, scaling analyses of daily streamflow from 173 streamgages in the southeastern US resulted in three important findings. First, the use of only positive integer moment orders, as has been done in most previous studies, captures only the probabilistic and spatial scaling behavior of flows above an exceedance probability near the median; negative moment orders (inverse moments) are needed for lower streamflows. Second, assessing scaling by using drainage area alone is shown to result in a high degree of omitted-variable bias, masking the true spatial scaling behavior. Multiple regression is shown to mitigate this bias, controlling for regional heterogeneity of basin attributes, especially those correlated with drainage area. Previous univariate scaling analyses have neglected the scaling of low-flow events and may have produced biased estimates of the spatial scaling exponent. Third, the multiple regression results show that mean flows scale with an exponent of one, low flows scale with spatial scaling exponents greater than one, and high flows scale with exponents less than one. The relationship between scaling exponents and exceedance probabilities may be a fundamental signature of regional streamflow. This signature may improve our understanding of the physical processes generating streamflow at different exceedance probabilities. 

  11. Using Mental Transformation Strategies for Spatial Scaling: Evidence from a Discrimination Task

    ERIC Educational Resources Information Center

    Möhring, Wenke; Newcombe, Nora S.; Frick, Andrea

    2016-01-01

    Spatial scaling, or an understanding of how distances in different-sized spaces relate to each other, is fundamental for many spatial tasks and relevant for success in numerous professions. Previous research has suggested that adults use mental transformation strategies to mentally scale spatial input, as indicated by linear increases in response…

  12. Spatial patterns of giant sequoia (Sequoiadendron giganteum) in two sequoia groves in Sequoia National Park, California

    USGS Publications Warehouse

    Stohlgren, Thomas J.

    1993-01-01

    Although Muir Grove and Castle Creek Grove are similar in area, elevation, and number of giant sequoias, various spatial pattern analysis techniques showed that they had dissimilar spatial patterns for similar-sized trees. Two-dimensional and transect two-term local quadrat variance techniques detected general trends in the spatial patterns of different-sized trees, detected multiple-scale patterns within individual size classes, and provided information on the scale and intensity of patches of individual size classes of trees in Muir and Castle Creek groves. In Muir Grove, midsized sequoias (1.5 to 2.4 m DBH classes) had major pattern scales 350–450 m in diameter, whereas the same-sized trees in Castle Creek Grove had pattern scales >1000 m in diameter. Many size classes of trees had minor patches superimposed on larger scale patterns in both groves. There may be different recruitment patterns in core (i.e., central) areas compared with peripheral areas of sequoia groves; core areas of both groves had more small live sequoias and dead sequoias than peripheral areas of the groves. Higher densities of sequoias and, perhaps, more rapid turnover of individuals in core areas may indicate (i) differences in disturbance histories and favorability of microsites in the core and peripheral areas of groves; (ii) different responses to disturbance due to shifts in the species composition of the stand and thus, the relative influences of intra- to inter-specific competition; or (iii) slower growth or lower survivorship rates in marginal habitat (i.e., peripheral areas).

  13. Runoff simulation sensitivity to remotely sensed initial soil water content

    NASA Astrophysics Data System (ADS)

    Goodrich, D. C.; Schmugge, T. J.; Jackson, T. J.; Unkrich, C. L.; Keefer, T. O.; Parry, R.; Bach, L. B.; Amer, S. A.

    1994-05-01

    A variety of aircraft remotely sensed and conventional ground-based measurements of volumetric soil water content (SW) were made over two subwatersheds (4.4 and 631 ha) of the U.S. Department of Agriculture's Agricultural Research Service Walnut Gulch experimental watershed during the 1990 monsoon season. Spatially distributed soil water contents estimated remotely from the NASA push broom microwave radiometer (PBMR), an Institute of Radioengineering and Electronics (IRE) multifrequency radiometer, and three ground-based point methods were used to define prestorm initial SW for a distributed rainfall-runoff model (KINEROS; Woolhiser et al., 1990) at a small catchment scale (4.4 ha). At a medium catchment scale (631 ha or 6.31 km2) spatially distributed PBMR SW data were aggregated via stream order reduction. The impacts of the various spatial averages of SW on runoff simulations are discussed and are compared to runoff simulations using SW estimates derived from a simple daily water balance model. It was found that at the small catchment scale the SW data obtained from any of the measurement methods could be used to obtain reasonable runoff predictions. At the medium catchment scale, a basin-wide remotely sensed average of initial water content was sufficient for runoff simulations. This has important implications for the possible use of satellite-based microwave soil moisture data to define prestorm SW because the low spatial resolutions of such sensors may not seriously impact runoff simulations under the conditions examined. However, at both the small and medium basin scale, adequate resources must be devoted to proper definition of the input rainfall to achieve reasonable runoff simulations.

  14. Cities, traffic, and CO2: A multidecadal assessment of trends, drivers, and scaling relationships

    PubMed Central

    Gately, Conor K.; Hutyra, Lucy R.; Sue Wing, Ian

    2015-01-01

    Emissions of CO2 from road vehicles were 1.57 billion metric tons in 2012, accounting for 28% of US fossil fuel CO2 emissions, but the spatial distributions of these emissions are highly uncertain. We develop a new emissions inventory, the Database of Road Transportation Emissions (DARTE), which estimates CO2 emitted by US road transport at a resolution of 1 km annually for 1980–2012. DARTE reveals that urban areas are responsible for 80% of on-road emissions growth since 1980 and for 63% of total 2012 emissions. We observe nonlinearities between CO2 emissions and population density at broad spatial/temporal scales, with total on-road CO2 increasing nonlinearly with population density, rapidly up to 1,650 persons per square kilometer and slowly thereafter. Per capita emissions decline as density rises, but at markedly varying rates depending on existing densities. We make use of DARTE’s bottom-up construction to highlight the biases associated with the common practice of using population as a linear proxy for disaggregating national- or state-scale emissions. Comparing DARTE with existing downscaled inventories, we find biases of 100% or more in the spatial distribution of urban and rural emissions, largely driven by mismatches between inventory downscaling proxies and the actual spatial patterns of vehicle activity at urban scales. Given cities’ dual importance as sources of CO2 and an emerging nexus of climate mitigation initiatives, high-resolution estimates such as DARTE are critical both for accurately quantifying surface carbon fluxes and for verifying the effectiveness of emissions mitigation efforts at urban scales. PMID:25847992

  15. Real-time optical correlator using computer-generated holographic filter on a liquid crystal light valve

    NASA Technical Reports Server (NTRS)

    Chao, Tien-Hsin; Yu, Jeffrey

    1990-01-01

    Limitations associated with the binary phase-only filter often used in optical correlators are presently circumvented in the writing of complex-valued data on a gray-scale spatial light modulator through the use of a computer-generated hologram (CGH) algorithm. The CGH encodes complex-valued data into nonnegative real CGH data in such a way that it may be encoded in any of the available gray-scale spatial light modulators. A CdS liquid-crystal light valve is used for the complex-valued CGH encoding; computer simulations and experimental results are compared, and the use of such a CGH filter as the synapse hologram in a holographic optical neural net is discussed.

  16. Exploring the Linkage of Sea Surface Temperature Variability on Three Spatial Scales

    NASA Astrophysics Data System (ADS)

    Luo, L.; Capone, D. G.; Hutchins, D.; Kiefer, D.

    2011-12-01

    As part of a project examining climate change in the Southern California Bight at the University of Southern California, we studied the linkage of the variability of sea surface temperature across three nested spatial scales, the north Pacific Basin, the West Coast of North American, and the Southern California Bight. Specifically, we analyzed daily GHRSST images between September 1981 and July 2009. In order to remove seasonal changes in temperature and focus upon differences between years, we calculate weekly mean temperature for each pixel from the time series, and then subjected the anomalies for the 3 spatial scales to empirical orthogonal function (EOF) analysis. The corresponding temporal expansion coefficients and spatial components (eigenvector) for each EOF mode were then generated to examine the temporal and spatial patterns of SST change. The results showed that the El Nino Southern Oscillation (ENSO) has a clear influence on the SST variability across all the three spatial scales, especially the 1st EOF mode which represents the largest variance. The comparison between the time coefficients of the 1st EOF mode and the Oceanic Nino Index (ONI) suggested that the EOF mode 1 of the Pacific Basin region matched well with almost all the El Nino and La Nina signals while the West Coast of North American captured only the strong signals and the Southern California Bight captures still fewer of the signals. This clearly indicated that the Southern California Bight is relatively insensitive to ENSO signal relative to other locations along the West Coast. The 1st EOF Mode for the West Coast of North American was also clearly influenced by upwelling. The cross correlation coefficient between each pair of the EOF mode 1 temporal expansion coefficients for the three spatial scales suggested that they were significantly correlated to each other. The effect of the Pacific Decadal Oscillation (PDO) on the SST change was also demonstrated by the temporal variability of the temporal expansion coefficients of the 2nd EOF mode. However, the correlations of 2nd EOF mode time coefficients between the three scales appeared relatively low compared the 1st EOF mode. In summary sea surface temperature in the Southern California Bight behaves like a node that is relatively insensitive to ENSO, PDO, and upwelling signals.

  17. A Kennicutt-Schmidt relation at molecular cloud scales and beyond

    NASA Astrophysics Data System (ADS)

    Khoperskov, Sergey A.; Vasiliev, Evgenii O.

    2017-06-01

    Using N-body/gasdynamic simulations of a Milky Way-like galaxy, we analyse a Kennicutt-Schmidt (KS) relation, Σ _SFR ∝ Σ _gas^N, at different spatial scales. We simulate synthetic observations in CO lines and ultraviolet (UV) band. We adopt the star formation rate (SFR) defined in two ways: based on free fall collapse of a molecular cloud - ΣSFR, cl, and calculated by using a UV flux calibration - ΣSFR,UV. We study a KS relation for spatially smoothed maps with effective spatial resolution from molecular cloud scales to several hundred parsecs. We find that for spatially and kinematically resolved molecular clouds the Σ _{SFR, cl} ∝ σ _{gas}^N relation follows the power law with index N ≈ 1.4. Using UV flux as SFR calibrator, we confirm a systematic offset between the ΣSFR,UV and Σgas distributions on scales compared to molecular cloud sizes. Degrading resolution of our simulated maps for surface densities of gas and SFRs, we establish that there is no relation ΣSFR,UV -Σgas below the resolution ˜50 pc. We find a transition range around scales ˜50-120 pc, where the power-law index N increases from 0 to 1-1.8 and saturates for scales larger ˜120 pc. A value of the index saturated depends on a surface gas density threshold and it becomes steeper for higher Σgas threshold. Averaging over scales with size of ≳ 150 pc the power-law index N equals 1.3-1.4 for surface gas density threshold ˜5 M⊙ pc-2. At scales ≳ 120 pc surface SFR densities determined by using CO data and UV flux, ΣSFR,UV/SFR, cl, demonstrate a discrepancy about a factor of 3. We argue that this may be originated from overestimating (constant) values of conversion factor, star formation efficiency or UV calibration used in our analysis.

  18. Recurrent patterning in the daily foraging routes of hamadryas baboons (Papio hamadryas): spatial memory in large-scale versus small-scale space.

    PubMed

    Schreier, Amy L; Grove, Matt

    2014-05-01

    The benefits of spatial memory for foraging animals can be assessed on two distinct spatial scales: small-scale space (travel within patches) and large-scale space (travel between patches). While the patches themselves may be distributed at low density, within patches resources are likely densely distributed. We propose, therefore, that spatial memory for recalling the particular locations of previously visited feeding sites will be more advantageous during between-patch movement, where it may reduce the distances traveled by animals that possess this ability compared to those that must rely on random search. We address this hypothesis by employing descriptive statistics and spectral analyses to characterize the daily foraging routes of a band of wild hamadryas baboons in Filoha, Ethiopia. The baboons slept on two main cliffs--the Filoha cliff and the Wasaro cliff--and daily travel began and ended on a cliff; thus four daily travel routes exist: Filoha-Filoha, Filoha-Wasaro, Wasaro-Wasaro, Wasaro-Filoha. We use newly developed partial sum methods and distribution-fitting analyses to distinguish periods of area-restricted search from more extensive movements. The results indicate a single peak in travel activity in the Filoha-Filoha and Wasaro-Filoha routes, three peaks of travel activity in the Filoha-Wasaro routes, and two peaks in the Wasaro-Wasaro routes; and are consistent with on-the-ground observations of foraging and ranging behavior of the baboons. In each of the four daily travel routes the "tipping points" identified by the partial sum analyses indicate transitions between travel in small- versus large-scale space. The correspondence between the quantitative analyses and the field observations suggest great utility for using these types of analyses to examine primate travel patterns and especially in distinguishing between movement in small versus large-scale space. Only the distribution-fitting analyses are inconsistent with the field observations, which may be due to the scale at which these analyses were conducted. © 2013 Wiley Periodicals, Inc.

  19. Comparison of H-alpha synoptic charts with the large-scale solar magnetic field as observed at Stanford

    NASA Technical Reports Server (NTRS)

    Duvall, T. L., Jr.; Wilcox, J. M.; Svalgaard, L.; Scherrer, P. H.; Mcintosh, P. S.

    1977-01-01

    Two methods of observing the neutral line of the large-scale photospheric magnetic field are compared: neutral line positions inferred from H-alpha photographs (McIntosh and Nolte, 1975) and observations of the photospheric magnetic field made with low spatial resolution (three minutes) and high sensitivity using the Stanford magnetograph. The comparison is found to be very favorable.

  20. Long-term Observations of Intense Precipitation Small-scale Spatial Variability in a Semi-arid Catchment

    NASA Astrophysics Data System (ADS)

    Cropp, E. L.; Hazenberg, P.; Castro, C. L.; Demaria, E. M.

    2017-12-01

    In the southwestern US, the summertime North American Monsoon (NAM) provides about 60% of the region's annual precipitation. Recent research using high-resolution atmospheric model simulations and retrospective predictions has shown that since the 1950's, and more specifically in the last few decades, the mean daily precipitation in the southwestern U.S. during the NAM has followed a decreasing trend. Furthermore, days with more extreme precipitation have intensified. The current work focuses the impact of these long-term changes on the observed small-scale spatial variability of intense precipitation. Since limited long-term high-resolution observational data exist to support such climatological-induced spatial changes in precipitation frequency and intensity, the current work utilizes observations from the USDA-ARS Walnut Gulch Experimental Watershed (WGEW) in southeastern Arizona. Within this 150 km^2 catchment over 90 rain gauges have been installed since the 1950s, measuring at sub-hourly resolution. We have applied geospatial analyses and the kriging interpolation technique to identify long-term changes in the spatial and temporal correlation and anisotropy of intense precipitation. The observed results will be compared with the previously model simulated results, as well as related to large-scale variations in climate patterns, such as the El Niño Southern Oscillation (ENSO) and the Pacific Decadal Oscillation (PDO).

  1. Coordinated learning of grid cell and place cell spatial and temporal properties: multiple scales, attention and oscillations.

    PubMed

    Grossberg, Stephen; Pilly, Praveen K

    2014-02-05

    A neural model proposes how entorhinal grid cells and hippocampal place cells may develop as spatial categories in a hierarchy of self-organizing maps (SOMs). The model responds to realistic rat navigational trajectories by learning both grid cells with hexagonal grid firing fields of multiple spatial scales, and place cells with one or more firing fields, that match neurophysiological data about their development in juvenile rats. Both grid and place cells can develop by detecting, learning and remembering the most frequent and energetic co-occurrences of their inputs. The model's parsimonious properties include: similar ring attractor mechanisms process linear and angular path integration inputs that drive map learning; the same SOM mechanisms can learn grid cell and place cell receptive fields; and the learning of the dorsoventral organization of multiple spatial scale modules through medial entorhinal cortex to hippocampus (HC) may use mechanisms homologous to those for temporal learning through lateral entorhinal cortex to HC ('neural relativity'). The model clarifies how top-down HC-to-entorhinal attentional mechanisms may stabilize map learning, simulates how hippocampal inactivation may disrupt grid cells, and explains data about theta, beta and gamma oscillations. The article also compares the three main types of grid cell models in the light of recent data.

  2. Comparison of the Cloud Morphology Spatial Structure Between Jupiter and Saturn Using JunoCam and Cassini ISS

    NASA Astrophysics Data System (ADS)

    Garland, Justin; Sayanagi, Kunio M.; Blalock, John J.; Gunnarson, Jacob; McCabe, Ryan M.; Gallego, Angelina; Hansen, Candice; Orton, Glenn S.

    2017-10-01

    We present an analysis of the spatial-scales contained in the cloud morphology of Jupiter’s southern high latitudes using images captured by JunoCam in 2016 and 2017, and compare them to those on Saturn using images captured using the Imaging Science Subsystem (ISS) on board the Cassini orbiter. For Jupiter, the characteristic spatial scale of cloud morphology as a function of latitude is calculated from images taken in three visual (600-800, 500-600, 420-520 nm) bands and a near-infrared (880- 900 nm) band. In particular, we analyze the transition from the banded structure characteristic of Jupiter’s mid-latitudes to the chaotic structure of the polar region. We apply similar analysis to Saturn using images captured using Cassini ISS. In contrast to Jupiter, Saturn maintains its zonally organized cloud morphology from low latitudes up to the poles, culminating in the cyclonic polar vortices centered at each of the poles. By quantifying the differences in the spatial scales contained in the cloud morphology, our analysis will shed light on the processes that control the banded structures on Jupiter and Saturn. Our work has been supported by the following grants: NASA PATM NNX14AK07G, NASA MUREP NNX15AQ03A, and NSF AAG 1212216.

  3. Annual water, sediment, nutrient, and organic carbon fluxes in river basins: A global meta-analysis as a function of scale

    NASA Astrophysics Data System (ADS)

    Mutema, M.; Chaplot, V.; Jewitt, G.; Chivenge, P.; Blöschl, G.

    2015-11-01

    Process controls on water, sediment, nutrient, and organic carbon exports from the landscape through runoff are not fully understood. This paper provides analyses from 446 sites worldwide to evaluate the impact of environmental factors (MAP and MAT: mean annual precipitation and temperature; CLAY and BD: soil clay content and bulk density; S: slope gradient; LU: land use) on annual exports (RC: runoff coefficients; SL: sediment loads; TOCL: organic carbon losses; TNL: nitrogen losses; TPL: phosphorus losses) from different spatial scales. RC was found to increase, on average, from 18% at local scale (in headwaters), 25% at microcatchment and subcatchment scale (midreaches) to 41% at catchment scale (lower reaches of river basins) in response to multiple factors. SL increased from microplots (468 g m-2 yr-1) to plots (901 g m-2 yr-1), accompanied by decreasing TOCL and TNL. Climate was a major control masking the effects of other factors. For example, RC, SL, TOCL, TNL, and TPL tended to increase with MAP at all spatial scales. These variables, however, decreased with MAT. The impact of CLAY, BD, LU, and S on erosion variables was largely confined to the hillslope scale, where RC, SL, and TOCL decreased with CLAY, while TNL and TPL increased. The results contribute to better understanding of water, nutrient, and carbon cycles in terrestrial ecosystems and should inform river basin modeling and ecosystem management. The important role of spatial climate variability points to a need for comparative research in specific environments at nested spatiotemporal scales.

  4. Compactified cosmological simulations of the infinite universe

    NASA Astrophysics Data System (ADS)

    Rácz, Gábor; Szapudi, István; Csabai, István; Dobos, László

    2018-06-01

    We present a novel N-body simulation method that compactifies the infinite spatial extent of the Universe into a finite sphere with isotropic boundary conditions to follow the evolution of the large-scale structure. Our approach eliminates the need for periodic boundary conditions, a mere numerical convenience which is not supported by observation and which modifies the law of force on large scales in an unrealistic fashion. We demonstrate that our method outclasses standard simulations executed on workstation-scale hardware in dynamic range, it is balanced in following a comparable number of high and low k modes and, its fundamental geometry and topology match observations. Our approach is also capable of simulating an expanding, infinite universe in static coordinates with Newtonian dynamics. The price of these achievements is that most of the simulated volume has smoothly varying mass and spatial resolution, an approximation that carries different systematics than periodic simulations. Our initial implementation of the method is called StePS which stands for Stereographically projected cosmological simulations. It uses stereographic projection for space compactification and naive O(N^2) force calculation which is nevertheless faster to arrive at a correlation function of the same quality than any standard (tree or P3M) algorithm with similar spatial and mass resolution. The N2 force calculation is easy to adapt to modern graphics cards, hence our code can function as a high-speed prediction tool for modern large-scale surveys. To learn about the limits of the respective methods, we compare StePS with GADGET-2 running matching initial conditions.

  5. Scaling of water vapor in the meso-gamma (2-20km) and lower meso-beta (20-50km) scales from tall tower time series

    NASA Astrophysics Data System (ADS)

    Pressel, K. G.; Collins, W.; Desai, A. R.

    2011-12-01

    Deficiencies in the parameterization of boundary layer clouds in global climate models (GCMs) remains one of the greatest sources of uncertainty in climate change predictions. Many GCM cloud parameterizations, which seek to include some representation of subgrid-scale cloud variability, do so by making assumptions regarding the subgrid-scale spatial probability density function (PDF) of total water content. Properly specifying the form and parameters of the total water PDF is an essential step in the formulation of PDF based cloud parameterizations. In the cloud free boundary layer, the PDF of total water mixing ratio is equivalent to the PDF of water vapor mixing ratio. Understanding the PDF of water vapor mixing ratio in the cloud free atmosphere is a necessary step towards understanding the PDF of water vapor in the cloudy atmosphere. A primary challenge in empirically constraining the PDF of water vapor mixing ratio is a distinct lack of a spatially distributed observational dataset at or near cloud scale. However, at meso-beta (20-50km) and larger scales, there is a wealth of information on the spatial distribution of water vapor contained in the physically retrieved water vapor profiles from the Atmospheric Infrared Sounder onboard NASA`s Aqua satellite. The scaling (scale-invariance) of the observed water vapor field has been suggested as means of using observations at satellite observed (meso-beta) scales to derive information about cloud scale PDFs. However, doing so requires the derivation of a robust climatology of water vapor scaling from in-situ observations across the meso- gamma (2-20km) and meso-beta scales. In this work, we present the results of the scaling of high frequency (10Hz) time series of water vapor mixing ratio as observed from the 447m WLEF tower located near Park Falls, Wisconsin. Observations from a tall tower offer an ideal set of observations with which to investigate scaling at meso-gamma and meso-beta scales requiring only the assumption of Taylor`s Hypothesis to convert observed time scales to spatial scales. Furthermore, the WLEF tower holds an instrument suite offering a diverse set of variables at the 396m, 122m, and 30m levels with which to characterize the state of the boundary layer. Three methods are used to compute scaling exponents for the observed time series; poor man`s variance spectra, first order structure functions, and detrended fluctuation analysis. In each case scaling exponents are computed by linear regression. The results for each method are compared and used to build a climatology of scaling exponents. In particular, the results for June 2007 are presented, and it is shown that the scaling of water vapor time series at the 396m level is characterized by two regimes that are determined by the state of the boundary layer. Finally, the results are compared to, and shown to be roughly consistent with, scaling exponents computed from AIRS observations.

  6. Stochastic downscaling of numerically simulated spatial rain and cloud fields using a transient multifractal approach

    NASA Astrophysics Data System (ADS)

    Nogueira, M.; Barros, A. P.; Miranda, P. M.

    2012-04-01

    Atmospheric fields can be extremely variable over wide ranges of spatial scales, with a scale ratio of 109-1010 between largest (planetary) and smallest (viscous dissipation) scale. Furthermore atmospheric fields with strong variability over wide ranges in scale most likely should not be artificially split apart into large and small scales, as in reality there is no scale separation between resolved and unresolved motions. Usually the effects of the unresolved scales are modeled by a deterministic bulk formula representing an ensemble of incoherent subgrid processes on the resolved flow. This is a pragmatic approach to the problem and not the complete solution to it. These models are expected to underrepresent the small-scale spatial variability of both dynamical and scalar fields due to implicit and explicit numerical diffusion as well as physically based subgrid scale turbulent mixing, resulting in smoother and less intermittent fields as compared to observations. Thus, a fundamental change in the way we formulate our models is required. Stochastic approaches equipped with a possible realization of subgrid processes and potentially coupled to the resolved scales over the range of significant scale interactions range provide one alternative to address the problem. Stochastic multifractal models based on the cascade phenomenology of the atmosphere and its governing equations in particular are the focus of this research. Previous results have shown that rain and cloud fields resulting from both idealized and realistic numerical simulations display multifractal behavior in the resolved scales. This result is observed even in the absence of scaling in the initial conditions or terrain forcing, suggesting that multiscaling is a general property of the nonlinear solutions of the Navier-Stokes equations governing atmospheric dynamics. Our results also show that the corresponding multiscaling parameters for rain and cloud fields exhibit complex nonlinear behavior depending on large scale parameters such as terrain forcing and mean atmospheric conditions at each location, particularly mean wind speed and moist stability. A particularly robust behavior found is the transition of the multiscaling parameters between stable and unstable cases, which has a clear physical correspondence to the transition from stratiform to organized (banded) convective regime. Thus multifractal diagnostics of moist processes are fundamentally transient and should provide a physically robust basis for the downscaling and sub-grid scale parameterizations of moist processes. Here, we investigate the possibility of using a simplified computationally efficient multifractal downscaling methodology based on turbulent cascades to produce statistically consistent fields at scales higher than the ones resolved by the model. Specifically, we are interested in producing rainfall and cloud fields at spatial resolutions necessary for effective flash flood and earth flows forecasting. The results are examined by comparing downscaled field against observations, and tendency error budgets are used to diagnose the evolution of transient errors in the numerical model prediction which can be attributed to aliasing.

  7. Separating the effects of environment and space on tree species distribution: from population to community.

    PubMed

    Lin, Guojun; Stralberg, Diana; Gong, Guiquan; Huang, Zhongliang; Ye, Wanhui; Wu, Linfang

    2013-01-01

    Quantifying the relative contributions of environmental conditions and spatial factors to species distribution can help improve our understanding of the processes that drive diversity patterns. In this study, based on tree inventory, topography and soil data from a 20-ha stem-mapped permanent forest plot in Guangdong Province, China, we evaluated the influence of different ecological processes at different spatial scales using canonical redundancy analysis (RDA) at the community level and multiple linear regression at the species level. At the community level, the proportion of explained variation in species distribution increased with grid-cell sizes, primarily due to a monotonic increase in the explanatory power of environmental variables. At the species level, neither environmental nor spatial factors were important determinants of overstory species' distributions at small cell sizes. However, purely spatial variables explained most of the variation in the distributions of understory species at fine and intermediate cell sizes. Midstory species showed patterns that were intermediate between those of overstory and understory species. At the 20-m cell size, the influence of spatial factors was stronger for more dispersal-limited species, suggesting that much of the spatial structuring in this community can be explained by dispersal limitation. Comparing environmental factors, soil variables had higher explanatory power than did topography for species distribution. However, both topographic and edaphic variables were highly spatial structured. Our results suggested that dispersal limitation has an important influence on fine-intermediate scale (from several to tens of meters) species distribution, while environmental variability facilitates species distribution at intermediate (from ten to tens of meters) and broad (from tens to hundreds of meters) scales.

  8. Downscaling near-surface soil moisture from field to plot scale: A comparative analysis under different environmental conditions

    NASA Astrophysics Data System (ADS)

    Nasta, Paolo; Penna, Daniele; Brocca, Luca; Zuecco, Giulia; Romano, Nunzio

    2018-02-01

    Indirect measurements of field-scale (hectometer grid-size) spatial-average near-surface soil moisture are becoming increasingly available by exploiting new-generation ground-based and satellite sensors. Nonetheless, modeling applications for water resources management require knowledge of plot-scale (1-5 m grid-size) soil moisture by using measurements through spatially-distributed sensor network systems. Since efforts to fulfill such requirements are not always possible due to time and budget constraints, alternative approaches are desirable. In this study, we explore the feasibility of determining spatial-average soil moisture and soil moisture patterns given the knowledge of long-term records of climate forcing data and topographic attributes. A downscaling approach is proposed that couples two different models: the Eco-Hydrological Bucket and Equilibrium Moisture from Topography. This approach helps identify the relative importance of two compound topographic indexes in explaining the spatial variation of soil moisture patterns, indicating valley- and hillslope-dependence controlled by lateral flow and radiative processes, respectively. The integrated model also detects temporal instability if the dominant type of topographic dependence changes with spatial-average soil moisture. Model application was carried out at three sites in different parts of Italy, each characterized by different environmental conditions. Prior calibration was performed by using sparse and sporadic soil moisture values measured by portable time domain reflectometry devices. Cross-site comparisons offer different interpretations in the explained spatial variation of soil moisture patterns, with time-invariant valley-dependence (site in northern Italy) and hillslope-dependence (site in southern Italy). The sources of soil moisture spatial variation at the site in central Italy are time-variant within the year and the seasonal change of topographic dependence can be conveniently correlated to a climate indicator such as the aridity index.

  9. Understanding the spatial complexity of surface hoar from slope to range scale

    NASA Astrophysics Data System (ADS)

    Hendrikx, J.

    2015-12-01

    Surface hoar, once buried, is a common weak layer type in avalanche accidents in continental and intermountain snowpacks around the World. Despite this, there is still limited understanding of the spatial variability in both the formation of, and eventual burial of, surface hoar at spatial scales which are of critical importance to avalanche forecasters. While it is relatively well understood that aspect plays an important role in the spatial location of the formation, and burial of these grain forms, due to the unequal distribution of incoming radiation, this factor alone does not explain the complex and often confusing spatial pattern of these grains forms throughout the landscape at different spatial scales. In this paper we present additional data from a unique data set including over two hundred days of manual observations of surface hoar at sixteen locations on Pioneer Mountain at the Yellowstone Club in southwestern Montana. Using this wealth of observational data located on different aspects, elevations and exposures, coupled with detailed meteorological observations, and detailed slope scale observation, we examine the spatial variability of surface hoar at this scale, and examine the factors that control its spatial distribution. Our results further supports our preliminary work, which shows that small-scale slope conditions, meteorological differences, and local scale lapse rates, can greatly influence the spatial variability of surface hoar, over and above that which aspect alone can explain. These results highlight our incomplete understanding of the processes at both the slope and range scale, and are likely to have implications for both regional and local scale avalanche forecasting in environments where surface hoar cause ongoing instabilities.

  10. Effects of Spatial Variability of Soil Properties on the Triggering of Rainfall-Induced Shallow Landslides

    NASA Astrophysics Data System (ADS)

    Fan, Linfeng; Lehmann, Peter; Or, Dani

    2015-04-01

    Naturally-occurring spatial variations in soil properties (e.g., soil depth, moisture, and texture) affect key hydrological processes and potentially the mechanical response of soil to hydromechanical loading (relative to the commonly-assumed uniform soil mantle). We quantified the effects of soil spatial variability on the triggering of rainfall-induced shallow landslides at the hillslope- and catchment-scales, using a physically-based landslide triggering model that considers interacting soil columns with mechanical strength thresholds (represented by the Fiber Bundle Model). The spatial variations in soil properties are represented as Gaussian random distributions and the level of variation is characterized by the coefficient of variation and correlation lengths of soil properties (i.e., soil depth, soil texture and initial water content in this study). The impacts of these spatial variations on landslide triggering characteristics were measured by comparing the times to triggering and landslide volumes for heterogeneous soil properties and homogeneous cases. Results at hillslope scale indicate that for spatial variations of an individual property (without cross correlation), the increasing of coefficient of variation introduces weak spots where mechanical damage is accelerated and leads to earlier onset of landslide triggering and smaller volumes. Increasing spatial correlation length of soil texture and initial water content also induces early landslide triggering and small released volumes due to the transition of failure mode from brittle to ductile failure. In contrast, increasing spatial correlation length of soil depth "reduces" local steepness and postpones landslide triggering. Cross-correlated soil properties generally promote landslide initiation, but depending on the internal structure of spatial distribution of each soil property, landslide triggering may be reduced. The effects of cross-correlation between initial water content and soil texture were investigated in detail at the catchment scale by incorporating correlations of both variables with topography. Results indicate that the internal structure of the spatial distribution of each soil property together with their interplays determine the overall performance of the coupled spatial variability. This study emphasizes the importance of both the randomness and spatial structure of soil properties on landslide triggering and characteristics.

  11. L-band HIgh Spatial Resolution Soil Moisture Mapping using SMALL UnManned Aerial Systems

    NASA Astrophysics Data System (ADS)

    Dai, E.; Venkitasubramony, A.; Gasiewski, A. J.; Stachura, M.; Elston, J. S.; Walter, B.; Lankford, D.; Corey, C.

    2017-12-01

    Soil moisture is of fundamental importance to many hydrological, biological and biogeochemical processes, plays an important role in the development and evolution of convective weather and precipitation, water resource management, agriculture, and flood runoff prediction. The launch of NASA's Soil Moisture Active/Passive (SMAP) mission in 2015 provided new passive global measurements of soil moisture and surface freeze/thaw state at fixed crossing times and spatial resolutions of 36 km. However, there exists a need for measurements of soil moisture on much smaller spatial scales and arbitrary diurnal times for SMAP validation, precision agriculture and evaporation and transpiration studies of boundary layer heat transport. The Lobe Differencing Correlation Radiometer (LDCR) provides a means of mapping soil moisture on spatial scales as small as several meters. Compared with other methods of validation based on either in-situ measurements [1,2] or existing airborne sensors suitable for manned aircraft deployment [3], the integrated design of the LDCR on a lightweight small UAS (sUAS) is capable of providing sub-watershed ( km scale) coverage at very high spatial resolution ( 15 m) suitable for scaling studies, and at comparatively low operator cost. To demonstrate the LDCR several flights had been performed during field experiments at the Canton Oklahoma Soilscape site and Yuma Colorado Irrigation Research Foundation (IRF) site in 2015 and 2016, respectively, using LDCR Revision A and Tempest sUAS. The scientific intercomparisons of LDCR retrieved soil moisture and in-situ measurements will be presented. LDCR Revision B has been built and integrated into SuperSwift sUAS and additional field experiments will be performed at IRF in 2017. In Revision B the IF signal is sampled at 80 MS/s to enable digital correlation and RFI mitigation capabilities, in addition to analog correlation. [1] McIntyre, E.M., A.J. Gasiewski, and D. Manda D, "Near Real-Time Passive C-Band Microwave Soil Moisture Retrieval During CLASIC 2007," Proc. IGARSS, 2008. [2] Robock, A., S. Steele-Dunne, J. Basara, W. Crow, and M. Moghaddam M, "In Situ Network and Scaling," SMAP Algorithm and Cal/Val Workshop, 2009. [3] Walker, A., "Airborne Microwave Radiometer Measurements During CanEx-SM10," Second SMAP Cal/Val Workshop, 2011.

  12. Scalability of grid- and subbasin-based land surface modeling approaches for hydrologic simulations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tesfa, Teklu K.; Ruby Leung, L.; Huang, Maoyi

    2014-03-27

    This paper investigates the relative merits of grid- and subbasin-based land surface modeling approaches for hydrologic simulations, with a focus on their scalability (i.e., abilities to perform consistently across a range of spatial resolutions) in simulating runoff generation. Simulations produced by the grid- and subbasin-based configurations of the Community Land Model (CLM) are compared at four spatial resolutions (0.125o, 0.25o, 0.5o and 1o) over the topographically diverse region of the U.S. Pacific Northwest. Using the 0.125o resolution simulation as the “reference”, statistical skill metrics are calculated and compared across simulations at 0.25o, 0.5o and 1o spatial resolutions of each modelingmore » approach at basin and topographic region levels. Results suggest significant scalability advantage for the subbasin-based approach compared to the grid-based approach for runoff generation. Basin level annual average relative errors of surface runoff at 0.25o, 0.5o, and 1o compared to 0.125o are 3%, 4%, and 6% for the subbasin-based configuration and 4%, 7%, and 11% for the grid-based configuration, respectively. The scalability advantages of the subbasin-based approach are more pronounced during winter/spring and over mountainous regions. The source of runoff scalability is found to be related to the scalability of major meteorological and land surface parameters of runoff generation. More specifically, the subbasin-based approach is more consistent across spatial scales than the grid-based approach in snowfall/rainfall partitioning, which is related to air temperature and surface elevation. Scalability of a topographic parameter used in the runoff parameterization also contributes to improved scalability of the rain driven saturated surface runoff component, particularly during winter. Hence this study demonstrates the importance of spatial structure for multi-scale modeling of hydrological processes, with implications to surface heat fluxes in coupled land-atmosphere modeling.« less

  13. Global mapping of highly pathogenic avian influenza H5N1 and H5Nx clade 2.3.4.4 viruses with spatial cross-validation

    PubMed Central

    Dhingra, Madhur S; Artois, Jean; Robinson, Timothy P; Linard, Catherine; Chaiban, Celia; Xenarios, Ioannis; Engler, Robin; Liechti, Robin; Kuznetsov, Dmitri; Xiao, Xiangming; Dobschuetz, Sophie Von; Claes, Filip; Newman, Scott H; Dauphin, Gwenaëlle; Gilbert, Marius

    2016-01-01

    Global disease suitability models are essential tools to inform surveillance systems and enable early detection. We present the first global suitability model of highly pathogenic avian influenza (HPAI) H5N1 and demonstrate that reliable predictions can be obtained at global scale. Best predictions are obtained using spatial predictor variables describing host distributions, rather than land use or eco-climatic spatial predictor variables, with a strong association with domestic duck and extensively raised chicken densities. Our results also support a more systematic use of spatial cross-validation in large-scale disease suitability modelling compared to standard random cross-validation that can lead to unreliable measure of extrapolation accuracy. A global suitability model of the H5 clade 2.3.4.4 viruses, a group of viruses that recently spread extensively in Asia and the US, shows in comparison a lower spatial extrapolation capacity than the HPAI H5N1 models, with a stronger association with intensively raised chicken densities and anthropogenic factors. DOI: http://dx.doi.org/10.7554/eLife.19571.001 PMID:27885988

  14. Flexible hydrological modeling - Disaggregation from lumped catchment scale to higher spatial resolutions

    NASA Astrophysics Data System (ADS)

    Tran, Quoc Quan; Willems, Patrick; Pannemans, Bart; Blanckaert, Joris; Pereira, Fernando; Nossent, Jiri; Cauwenberghs, Kris; Vansteenkiste, Thomas

    2015-04-01

    Based on an international literature review on model structures of existing rainfall-runoff and hydrological models, a generalized model structure is proposed. It consists of different types of meteorological components, storage components, splitting components and routing components. They can be spatially organized in a lumped way, or on a grid, spatially interlinked by source-to-sink or grid-to-grid (cell-to-cell) routing. The grid size of the model can be chosen depending on the application. The user can select/change the spatial resolution depending on the needs and/or the evaluation of the accuracy of the model results, or use different spatial resolutions in parallel for different applications. Major research questions addressed during the study are: How can we assure consistent results of the model at any spatial detail? How can we avoid strong or sudden changes in model parameters and corresponding simulation results, when one moves from one level of spatial detail to another? How can we limit the problem of overparameterization/equifinality when we move from the lumped model to the spatially distributed model? The proposed approach is a step-wise one, where first the lumped conceptual model is calibrated using a systematic, data-based approach, followed by a disaggregation step where the lumped parameters are disaggregated based on spatial catchment characteristics (topography, land use, soil characteristics). In this way, disaggregation can be done down to any spatial scale, and consistently among scales. Only few additional calibration parameters are introduced to scale the absolute spatial differences in model parameters, but keeping the relative differences as obtained from the spatial catchment characteristics. After calibration of the spatial model, the accuracies of the lumped and spatial models were compared for peak, low and cumulative runoff total and sub-flows (at downstream and internal gauging stations). For the distributed models, additional validation on spatial results was done for the groundwater head values at observation wells. To ensure that the lumped model can produce results as accurate as the spatially distributed models or close regardless to the number of parameters and implemented physical processes, it was checked whether the structure of the lumped models had to be adjusted. The concept has been implemented in a PCRaster - Python platform and tested for two Belgian case studies (catchments of the rivers Dijle and Grote Nete). So far, use is made of existing model structures (NAM, PDM, VHM and HBV). Acknowledgement: These results were obtained within the scope of research activities for the Flemish Environment Agency (VMM) - division Operational Water Management on "Next Generation hydrological modeling", in cooperation with IMDC consultants, and for Flanders Hydraulics Research (Waterbouwkundig Laboratorium) on "Effect of climate change on the hydrological regime of navigable watercourses in Belgium".

  15. Image scale measurement with correlation filters in a volume holographic optical correlator

    NASA Astrophysics Data System (ADS)

    Zheng, Tianxiang; Cao, Liangcai; He, Qingsheng; Jin, Guofan

    2013-08-01

    A search engine containing various target images or different part of a large scene area is of great use for many applications, including object detection, biometric recognition, and image registration. The input image captured in realtime is compared with all the template images in the search engine. A volume holographic correlator is one type of these search engines. It performs thousands of comparisons among the images at a super high speed, with the correlation task accomplishing mainly in optics. However, the inputted target image always contains scale variation to the filtering template images. At the time, the correlation values cannot properly reflect the similarity of the images. It is essential to estimate and eliminate the scale variation of the inputted target image. There are three domains for performing the scale measurement, as spatial, spectral and time domains. Most methods dealing with the scale factor are based on the spatial or the spectral domains. In this paper, a method with the time domain is proposed to measure the scale factor of the input image. It is called a time-sequential scaled method. The method utilizes the relationship between the scale variation and the correlation value of two images. It sends a few artificially scaled input images to compare with the template images. The correlation value increases and decreases with the increasing of the scale factor at the intervals of 0.8~1 and 1~1.2, respectively. The original scale of the input image can be measured by estimating the largest correlation value through correlating the artificially scaled input image with the template images. The measurement range for the scale can be 0.8~4.8. Scale factor beyond 1.2 is measured by scaling the input image at the factor of 1/2, 1/3 and 1/4, correlating the artificially scaled input image with the template images, and estimating the new corresponding scale factor inside 0.8~1.2.

  16. A variance-decomposition approach to investigating multiscale habitat associations

    USGS Publications Warehouse

    Lawler, J.J.; Edwards, T.C.

    2006-01-01

    The recognition of the importance of spatial scale in ecology has led many researchers to take multiscale approaches to studying habitat associations. However, few of the studies that investigate habitat associations at multiple spatial scales have considered the potential effects of cross-scale correlations in measured habitat variables. When cross-scale correlations in such studies are strong, conclusions drawn about the relative strength of habitat associations at different spatial scales may be inaccurate. Here we adapt and demonstrate an analytical technique based on variance decomposition for quantifying the influence of cross-scale correlations on multiscale habitat associations. We used the technique to quantify the variation in nest-site locations of Red-naped Sapsuckers (Sphyrapicus nuchalis) and Northern Flickers (Colaptes auratus) associated with habitat descriptors at three spatial scales. We demonstrate how the method can be used to identify components of variation that are associated only with factors at a single spatial scale as well as shared components of variation that represent cross-scale correlations. Despite the fact that no explanatory variables in our models were highly correlated (r < 0.60), we found that shared components of variation reflecting cross-scale correlations accounted for roughly half of the deviance explained by the models. These results highlight the importance of both conducting habitat analyses at multiple spatial scales and of quantifying the effects of cross-scale correlations in such analyses. Given the limits of conventional analytical techniques, we recommend alternative methods, such as the variance-decomposition technique demonstrated here, for analyzing habitat associations at multiple spatial scales. ?? The Cooper Ornithological Society 2006.

  17. Accuracy of stream habitat interpolations across spatial scales

    USGS Publications Warehouse

    Sheehan, Kenneth R.; Welsh, Stuart A.

    2013-01-01

    Stream habitat data are often collected across spatial scales because relationships among habitat, species occurrence, and management plans are linked at multiple spatial scales. Unfortunately, scale is often a factor limiting insight gained from spatial analysis of stream habitat data. Considerable cost is often expended to collect data at several spatial scales to provide accurate evaluation of spatial relationships in streams. To address utility of single scale set of stream habitat data used at varying scales, we examined the influence that data scaling had on accuracy of natural neighbor predictions of depth, flow, and benthic substrate. To achieve this goal, we measured two streams at gridded resolution of 0.33 × 0.33 meter cell size over a combined area of 934 m2 to create a baseline for natural neighbor interpolated maps at 12 incremental scales ranging from a raster cell size of 0.11 m2 to 16 m2 . Analysis of predictive maps showed a logarithmic linear decay pattern in RMSE values in interpolation accuracy for variables as resolution of data used to interpolate study areas became coarser. Proportional accuracy of interpolated models (r2 ) decreased, but it was maintained up to 78% as interpolation scale moved from 0.11 m2 to 16 m2 . Results indicated that accuracy retention was suitable for assessment and management purposes at various scales different from the data collection scale. Our study is relevant to spatial modeling, fish habitat assessment, and stream habitat management because it highlights the potential of using a single dataset to fulfill analysis needs rather than investing considerable cost to develop several scaled datasets.

  18. Development of a spatio-temporal disaggregation method (DisNDVI) for generating a time series of fine resolution NDVI images

    NASA Astrophysics Data System (ADS)

    Bindhu, V. M.; Narasimhan, B.

    2015-03-01

    Normalized Difference Vegetation Index (NDVI), a key parameter in understanding the vegetation dynamics, has high spatial and temporal variability. However, continuous monitoring of NDVI is not feasible at fine spatial resolution (<60 m) owing to the long revisit time needed by the satellites to acquire the fine spatial resolution data. Further, the study attains significance in the case of humid tropical regions of the earth, where the prevailing atmospheric conditions restrict availability of fine resolution cloud free images at a high temporal frequency. As an alternative to the lack of high resolution images, the current study demonstrates a novel disaggregation method (DisNDVI) which integrates the spatial information from a single fine resolution image and temporal information in terms of crop phenology from time series of coarse resolution images to generate estimates of NDVI at fine spatial and temporal resolution. The phenological variation of the pixels captured at the coarser scale provides the basis for relating the temporal variability of the pixel with the NDVI available at fine resolution. The proposed methodology was tested over a 30 km × 25 km spatially heterogeneous study area located in the south of Tamil Nadu, India. The robustness of the algorithm was assessed by an independent comparison of the disaggregated NDVI and observed NDVI obtained from concurrent Landsat ETM+ imagery. The results showed good spatial agreement across the study area dominated with agriculture and forest pixels, with a root mean square error of 0.05. The validation done at the coarser scale showed that disaggregated NDVI spatially averaged to 240 m compared well with concurrent MODIS NDVI at 240 m (R2 > 0.8). The validation results demonstrate the effectiveness of DisNDVI in improving the spatial and temporal resolution of NDVI images for utility in fine scale hydrological applications such as crop growth monitoring and estimation of evapotranspiration.

  19. Grain-dependent responses of mammalian diversity to land use and the implications for conservation set-aside.

    PubMed

    Wearn, Oliver R; Carbone, Chris; Rowcliffe, J Marcus; Bernard, Henry; Ewers, Robert M

    2016-07-01

    Diversity responses to land-use change are poorly understood at local scales, hindering our ability to make forecasts and management recommendations at scales which are of practical relevance. A key barrier in this has been the underappreciation of grain-dependent diversity responses and the role that β-diversity (variation in community composition across space) plays in this. Decisions about the most effective spatial arrangement of conservation set-aside, for example high conservation value areas, have also neglected β-diversity, despite its role in determining the complementarity of sites. We examined local-scale mammalian species richness and β-diversity across old-growth forest, logged forest, and oil palm plantations in Borneo, using intensive camera- and live-trapping. For the first time, we were able to investigate diversity responses, as well as β-diversity, at multiple spatial grains, and across the whole terrestrial mammal community (large and small mammals); β-diversity was quantified by comparing observed β-diversity with that obtained under a null model, in order to control for sampling effects, and we refer to this as the β-diversity signal. Community responses to land use were grain dependent, with large mammals showing reduced richness in logged forest compared to old-growth forest at the grain of individual sampling points, but no change at the overall land-use level. Responses varied with species group, however, with small mammals increasing in richness at all grains in logged forest compared to old-growth forest. Both species groups were significantly depauperate in oil palm. Large mammal communities in old-growth forest became more heterogeneous at coarser spatial grains and small mammal communities became more homogeneous, while this pattern was reversed in logged forest. Both groups, however, showed a significant β-diversity signal at the finest grain in logged forest, likely due to logging-induced environmental heterogeneity. The β-diversity signal in oil palm was weak, but heterogeneity at the coarsest spatial grain was still evident, likely due to variation in landscape forest cover. Our findings suggest that the most effective spatial arrangement of set-aside will involve trade-offs between conserving large and small mammals. Greater consideration in the conservation and management of tropical landscapes needs to be given to β-diversity at a range of spatial grains. © 2016 by the Ecological Society of America.

  20. A Bayesian method for assessing multiscalespecies-habitat relationships

    USGS Publications Warehouse

    Stuber, Erica F.; Gruber, Lutz F.; Fontaine, Joseph J.

    2017-01-01

    ContextScientists face several theoretical and methodological challenges in appropriately describing fundamental wildlife-habitat relationships in models. The spatial scales of habitat relationships are often unknown, and are expected to follow a multi-scale hierarchy. Typical frequentist or information theoretic approaches often suffer under collinearity in multi-scale studies, fail to converge when models are complex or represent an intractable computational burden when candidate model sets are large.ObjectivesOur objective was to implement an automated, Bayesian method for inference on the spatial scales of habitat variables that best predict animal abundance.MethodsWe introduce Bayesian latent indicator scale selection (BLISS), a Bayesian method to select spatial scales of predictors using latent scale indicator variables that are estimated with reversible-jump Markov chain Monte Carlo sampling. BLISS does not suffer from collinearity, and substantially reduces computation time of studies. We present a simulation study to validate our method and apply our method to a case-study of land cover predictors for ring-necked pheasant (Phasianus colchicus) abundance in Nebraska, USA.ResultsOur method returns accurate descriptions of the explanatory power of multiple spatial scales, and unbiased and precise parameter estimates under commonly encountered data limitations including spatial scale autocorrelation, effect size, and sample size. BLISS outperforms commonly used model selection methods including stepwise and AIC, and reduces runtime by 90%.ConclusionsGiven the pervasiveness of scale-dependency in ecology, and the implications of mismatches between the scales of analyses and ecological processes, identifying the spatial scales over which species are integrating habitat information is an important step in understanding species-habitat relationships. BLISS is a widely applicable method for identifying important spatial scales, propagating scale uncertainty, and testing hypotheses of scaling relationships.

  1. A multi-scale approach to monitor urban carbon-dioxide emissions in the atmosphere over Vancouver, Canada

    NASA Astrophysics Data System (ADS)

    Christen, A.; Crawford, B.; Ketler, R.; Lee, J. K.; McKendry, I. G.; Nesic, Z.; Caitlin, S.

    2015-12-01

    Measurements of long-lived greenhouse gases in the urban atmosphere are potentially useful to constrain and validate urban emission inventories, or space-borne remote-sensing products. We summarize and compare three different approaches, operating at different scales, that directly or indirectly identify, attribute and quantify emissions (and uptake) of carbon dioxide (CO2) in urban environments. All three approaches are illustrated using in-situ measurements in the atmosphere in and over Vancouver, Canada. Mobile sensing may be a promising way to quantify and map CO2 mixing ratios at fine scales across heterogenous and complex urban environments. We developed a system for monitoring CO2 mixing ratios at street level using a network of mobile CO2 sensors deployable on vehicles and bikes. A total of 5 prototype sensors were built and simultaneously used in a measurement campaign across a range of urban land use types and densities within a short time frame (3 hours). The dataset is used to aid in fine scale emission mapping in combination with simultaneous tower-based flux measurements. Overall, calculated CO2 emissions are realistic when compared against a spatially disaggregated scale emission inventory. The second approach is based on mass flux measurements of CO2 using a tower-based eddy covariance (EC) system. We present a continuous 7-year long dataset of CO2 fluxes measured by EC at the 28m tall flux tower 'Vancouver-Sunset'. We show how this dataset can be combined with turbulent source area models to quantify and partition different emission processes at the neighborhood-scale. The long-term EC measurements are within 10% of a spatially disaggregated scale emission inventory. Thirdly, at the urban scale, we present a dataset of CO2 mixing ratios measured using a tethered balloon system in the urban boundary layer above Vancouver. Using a simple box model, net city-scale CO2 emissions can be determined using measured rate of change of CO2 mixing ratios, estimated CO2 advection and entrainment fluxes. Daily city-scale emissions totals predicted by the model are within 32% of a spatially scaled municipal greenhouse gas inventory. In summary, combining information from different approaches and scales is a promising approach to establish long-term emission monitoring networks in cities.

  2. Detecting small-scale spatial differences and temporal dynamics of soil organic carbon (SOC) stocks: a comparison between automatic chamber-derived C budgets and repeated soil inventories

    NASA Astrophysics Data System (ADS)

    Hoffmann, Mathias; Jurisch, Nicole; Garcia Alba, Juana; Albiac Borraz, Elisa; Schmidt, Marten; Huth, Vytas; Rogasik, Helmut; Rieckh, Helene; Verch, Gernot; Sommer, Michael; Augustin, Jürgen

    2017-04-01

    Carbon (C) sequestration in soils plays a key role in the global C cycle. It is therefore crucial to adequately monitor dynamics in soil organic carbon (ΔSOC) stocks when aiming to reveal underlying processes and potential drivers. However, small-scale spatial and temporal changes in SOC stocks, particularly pronounced on arable lands, are hard to assess. The main reasons for this are limitations of the well-established methods. On the one hand, repeated soil inventories, often used in long-term field trials, reveal spatial patterns and trends in ΔSOC but require a longer observation period and a sufficient number of repetitions. On the other hand, eddy covariance measurements of C fluxes towards a complete C budget of the soil-plant-atmosphere system may help to obtain temporal ΔSOC patterns but lack small-scale spatial resolution. To overcome these limitations, this study presents a reliable method to detect both short-term temporal as well as small-scale spatial dynamics of ΔSOC. Therefore, a combination of automatic chamber (AC) measurements of CO2 exchange and empirically modeled aboveground biomass development (NPPshoot) was used. To verify our method, results were compared with ΔSOC observed by soil resampling. AC measurements were performed from 2010 to 2014 under a silage maize/winter fodder rye/sorghum-Sudan grass hybrid/alfalfa crop rotation at a colluvial depression located in the hummocky ground moraine landscape of NE Germany. Widespread in large areas of the formerly glaciated Northern Hemisphere, this depression type is characterized by a variable groundwater level (GWL) and pronounced small-scale spatial heterogeneity in soil properties, such as SOC and nitrogen (Nt). After monitoring the initial stage during 2010, soil erosion was experimentally simulated by incorporating topsoil material from an eroded midslope soil into the plough layer of the colluvial depression. SOC stocks were quantified before and after soil manipulation and at the end of the study period. AC-based ΔSOC values corresponded well with the tendencies and magnitude of the results observed in the repeated soil inventory. The period of maximum plant growth was identified as being most important for the development of spatial differences in annual ΔSOC. Hence, we were able to confirm that AC-based C budgets are able to reveal small-scale spatial and short-term temporal dynamics of ΔSOC.

  3. Comparison of Spatial Correlation Parameters between Full and Model Scale Launch Vehicles

    NASA Technical Reports Server (NTRS)

    Kenny, Jeremy; Giacomoni, Clothilde

    2016-01-01

    The current vibro-acoustic analysis tools require specific spatial correlation parameters as input to define the liftoff acoustic environment experienced by the launch vehicle. Until recently these parameters have not been very well defined. A comprehensive set of spatial correlation data were obtained during a scale model acoustic test conducted in 2014. From these spatial correlation data, several parameters were calculated: the decay coefficient, the diffuse to propagating ratio, and the angle of incidence. Spatial correlation data were also collected on the EFT-1 flight of the Delta IV vehicle which launched on December 5th, 2014. A comparison of the spatial correlation parameters from full scale and model scale data will be presented.

  4. A framework for mapping tree species combining hyperspectral and LiDAR data: Role of selected classifiers and sensor across three spatial scales

    NASA Astrophysics Data System (ADS)

    Ghosh, Aniruddha; Fassnacht, Fabian Ewald; Joshi, P. K.; Koch, Barbara

    2014-02-01

    Knowledge of tree species distribution is important worldwide for sustainable forest management and resource evaluation. The accuracy and information content of species maps produced using remote sensing images vary with scale, sensor (optical, microwave, LiDAR), classification algorithm, verification design and natural conditions like tree age, forest structure and density. Imaging spectroscopy reduces the inaccuracies making use of the detailed spectral response. However, the scale effect still has a strong influence and cannot be neglected. This study aims to bridge the knowledge gap in understanding the scale effect in imaging spectroscopy when moving from 4 to 30 m pixel size for tree species mapping, keeping in mind that most current and future hyperspectral satellite based sensors work with spatial resolution around 30 m or more. Two airborne (HyMAP) and one spaceborne (Hyperion) imaging spectroscopy dataset with pixel sizes of 4, 8 and 30 m, respectively were available to examine the effect of scale over a central European forest. The forest under examination is a typical managed forest with relatively homogenous stands featuring mostly two canopy layers. Normalized digital surface model (nDSM) derived from LiDAR data was used additionally to examine the effect of height information in tree species mapping. Six different sets of predictor variables (reflectance value of all bands, selected components of a Minimum Noise Fraction (MNF), Vegetation Indices (VI) and each of these sets combined with LiDAR derived height) were explored at each scale. Supervised kernel based (Support Vector Machines) and ensemble based (Random Forest) machine learning algorithms were applied on the dataset to investigate the effect of the classifier. Iterative bootstrap-validation with 100 iterations was performed for classification model building and testing for all the trials. For scale, analysis of overall classification accuracy and kappa values indicated that 8 m spatial resolution (reaching kappa values of over 0.83) slightly outperformed the results obtained from 4 m for the study area and five tree species under examination. The 30 m resolution Hyperion image produced sound results (kappa values of over 0.70), which in some areas of the test site were comparable with the higher spatial resolution imagery when qualitatively assessing the map outputs. Considering input predictor sets, MNF bands performed best at 4 and 8 m resolution. Optical bands were found to be best for 30 m spatial resolution. Classification with MNF as input predictors produced better visual appearance of tree species patches when compared with reference maps. Based on the analysis, it was concluded that there is no significant effect of height information on tree species classification accuracies for the present framework and study area. Furthermore, in the examined cases there was no single best choice among the two classifiers across scales and predictors. It can be concluded that tree species mapping from imaging spectroscopy for forest sites comparable to the one under investigation is possible with reliable accuracies not only from airborne but also from spaceborne imaging spectroscopy datasets.

  5. On the nonlinearity of spatial scales in extreme weather attribution statements

    NASA Astrophysics Data System (ADS)

    Angélil, Oliver; Stone, Daíthí; Perkins-Kirkpatrick, Sarah; Alexander, Lisa V.; Wehner, Michael; Shiogama, Hideo; Wolski, Piotr; Ciavarella, Andrew; Christidis, Nikolaos

    2018-04-01

    In the context of ongoing climate change, extreme weather events are drawing increasing attention from the public and news media. A question often asked is how the likelihood of extremes might have changed by anthropogenic greenhouse-gas emissions. Answers to the question are strongly influenced by the model used, duration, spatial extent, and geographic location of the event—some of these factors often overlooked. Using output from four global climate models, we provide attribution statements characterised by a change in probability of occurrence due to anthropogenic greenhouse-gas emissions, for rainfall and temperature extremes occurring at seven discretised spatial scales and three temporal scales. An understanding of the sensitivity of attribution statements to a range of spatial and temporal scales of extremes allows for the scaling of attribution statements, rendering them relevant to other extremes having similar but non-identical characteristics. This is a procedure simple enough to approximate timely estimates of the anthropogenic contribution to the event probability. Furthermore, since real extremes do not have well-defined physical borders, scaling can help quantify uncertainty around attribution results due to uncertainty around the event definition. Results suggest that the sensitivity of attribution statements to spatial scale is similar across models and that the sensitivity of attribution statements to the model used is often greater than the sensitivity to a doubling or halving of the spatial scale of the event. The use of a range of spatial scales allows us to identify a nonlinear relationship between the spatial scale of the event studied and the attribution statement.

  6. On the nonlinearity of spatial scales in extreme weather attribution statements

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Angélil, Oliver; Stone, Daíthí; Perkins-Kirkpatrick, Sarah

    In the context of continuing climate change, extreme weather events are drawing increasing attention from the public and news media. A question often asked is how the likelihood of extremes might have changed by anthropogenic greenhouse-gas emissions. Answers to the question are strongly influenced by the model used, duration, spatial extent, and geographic location of the event—some of these factors often overlooked. Using output from four global climate models, we provide attribution statements characterised by a change in probability of occurrence due to anthropogenic greenhouse-gas emissions, for rainfall and temperature extremes occurring at seven discretised spatial scales and three temporalmore » scales. An understanding of the sensitivity of attribution statements to a range of spatial and temporal scales of extremes allows for the scaling of attribution statements, rendering them relevant to other extremes having similar but non-identical characteristics. This is a procedure simple enough to approximate timely estimates of the anthropogenic contribution to the event probability. Furthermore, since real extremes do not have well-defined physical borders, scaling can help quantify uncertainty around attribution results due to uncertainty around the event definition. Results suggest that the sensitivity of attribution statements to spatial scale is similar across models and that the sensitivity of attribution statements to the model used is often greater than the sensitivity to a doubling or halving of the spatial scale of the event. The use of a range of spatial scales allows us to identify a nonlinear relationship between the spatial scale of the event studied and the attribution statement.« less

  7. On the nonlinearity of spatial scales in extreme weather attribution statements

    DOE PAGES

    Angélil, Oliver; Stone, Daíthí; Perkins-Kirkpatrick, Sarah; ...

    2017-06-17

    In the context of continuing climate change, extreme weather events are drawing increasing attention from the public and news media. A question often asked is how the likelihood of extremes might have changed by anthropogenic greenhouse-gas emissions. Answers to the question are strongly influenced by the model used, duration, spatial extent, and geographic location of the event—some of these factors often overlooked. Using output from four global climate models, we provide attribution statements characterised by a change in probability of occurrence due to anthropogenic greenhouse-gas emissions, for rainfall and temperature extremes occurring at seven discretised spatial scales and three temporalmore » scales. An understanding of the sensitivity of attribution statements to a range of spatial and temporal scales of extremes allows for the scaling of attribution statements, rendering them relevant to other extremes having similar but non-identical characteristics. This is a procedure simple enough to approximate timely estimates of the anthropogenic contribution to the event probability. Furthermore, since real extremes do not have well-defined physical borders, scaling can help quantify uncertainty around attribution results due to uncertainty around the event definition. Results suggest that the sensitivity of attribution statements to spatial scale is similar across models and that the sensitivity of attribution statements to the model used is often greater than the sensitivity to a doubling or halving of the spatial scale of the event. The use of a range of spatial scales allows us to identify a nonlinear relationship between the spatial scale of the event studied and the attribution statement.« less

  8. Sensitivity of landscape metrics to changing scale of remote sensing data in spatial pattern analysis: effect, criticality and scaling.

    NASA Astrophysics Data System (ADS)

    Xu, C.; Zhao, S.; Zhao, B.

    2017-12-01

    Spatial heterogeneity is scale-dependent, that is, the quantification and representation of spatial pattern vary with the resolution and extent. Overwhelming practices focused on scale effect of landscape metrics, and predicable scaling relationships found among some of them are thought to be the most effective and precise way to quantify multi-scale characteristics. However, previous studies tended to consider a narrow range of scales, and few focused on the critical threshold of scaling function. Here we examine the scalograms of 38 widely-used landscape-level metrics in a more integral spectrum of grain size among 96 landscapes with various extent (i.e. from 25km2 up towards to 221 km2), which sampled randomly from NLCD product. Our goal is to explore the existence of scaling domain and whether the response of metrics to changing resolution would be influenced by spatial extent. Results clearly show the existence of scaling domain for 13 of them (Type II), while the behaviors of other 13 (Type I) exhibit simple scaling functions and the rest (Type III) demonstrate various forms like no obvious change or fluctuation across the integral spectrum of grain size. In addition, an invariant power law scaling relationship was found between critical resolution and spatial extent for metrics falling into Type II, as the critical resolution is proportional to Eρ (ρ is a constant, and E is the extent). All the scaling exponents (ρ) are positive, suggesting that the critical resolutions for these characteristics of landscape structure can be relaxed as the spatial extent expands. This agrees well with empirical perception that coarser grain size might be allowed for spatial data with larger extent. Furthermore, the parameters of scaling functions for metrics falling into Type I and Type II vary with spatial extent, and power law or logarithmic relationships could be identified between them for some metrics. Our finding support the existence of self-organized criticality for a hierarchically-structured landscape. Although the underlying mechanism driving the scaling relationship remains unclear, it could provide guidance toward general principles in spatial pattern analysis and on selecting the proper resolution to avoid the misrepresentation of spatial pattern and profound biases in further ecological progress research.

  9. Multi-Decadal Pathfinder Data Sets of Global Land Biophysical Variables from AVHRR and MODIS and their Use in GCM Studies of Biogeophysics and Biogeochemistry

    NASA Technical Reports Server (NTRS)

    Myneni, Ranga

    2003-01-01

    The problem of how the scale, or spatial resolution, of reflectance data impacts retrievals of vegetation leaf area index (LAI) and fraction absorbed photosynthetically active radiation (PAR) has been investigated. We define the goal of scaling as the process by which it is established that LAI and FPAR values derived from coarse resolution sensor data equal the arithmetic average of values derived independently from fine resolution sensor data. The increasing probability of land cover mixtures with decreasing resolution is defined as heterogeneity, which is a key concept in scaling studies. The effect of pixel heterogeneity on spectral reflectances and LAI/FPAR retrievals is investigated with 1 km Advanced Very High Resolution Radiometer (AVHRR) data aggregated to different coarse spatial resolutions. It is shown that LAI retrieval errors at coarse resolution are inversely related to the proportion of the dominant land cover in such pixel. Further, large errors in LAI retrievals are incurred when forests are minority biomes in non-forest pixels compared to when forest biomes are mixed with one another, and vice-versa. A physically based technique for scaling with explicit spatial resolution dependent radiative transfer formulation is developed. The successful application of this theory to scaling LAI retrievals from AVHRR data of different resolutions is demonstrated

  10. Synoptic Storms in the North Atlantic in the Atmospheric Reanalysis and Scatterometer-Based Wind Products

    NASA Astrophysics Data System (ADS)

    Dukhovskoy, D. S.; Bourassa, M. A.

    2016-12-01

    The study compares and analyses the characteristics of synoptic storms in the Subpolar North Atlantic over the time period from 2000 through 2009 derived from reanalysis data sets and scatterometer-based gridded wind products. The analysis is performed for ocean 10-m winds derived from the following wind data sets: NCEP/DOE AMIP-II reanalysis (NCEPR2), NCAR/CFSR, Arctic System Reanalysis (ASR) version 1, Cross-Calibrated Multi-Platform (CCMP) wind product versions 1.1 and recently released version 2.0 prepared by the Remote Sensing Systems, and QuikSCAT. A cyclone tracking algorithm employed in this study for storm identification is based on average vorticity fields derived from the wind data. The study discusses storm characteristics such as storm counts, trajectories, intensity, integrated kinetic energy, spatial scale. Interannal variability of these characteristics in the data sets is compared. The analyses demonstrates general agreement among the wind data products on the characteristics of the storms, their spatial distribution and trajectories. On average, the NCEPR2 storms are more energetic mostly due to large spatial scales and stronger winds. There is noticeable interannual variability in the storm characteristics, yet no obvious trend in storms is observed in the data sets.

  11. Scaling properties of the Arctic sea ice Deformation from Buoy Dispersion Analysis

    NASA Astrophysics Data System (ADS)

    Weiss, J.; Rampal, P.; Marsan, D.; Lindsay, R.; Stern, H.

    2007-12-01

    A temporal and spatial scaling analysis of Arctic sea ice deformation is performed over time scales from 3 hours to 3 months and over spatial scales from 300 m to 300 km. The deformation is derived from the dispersion of pairs of drifting buoys, using the IABP (International Arctic Buoy Program) buoy data sets. This study characterizes the deformation of a very large solid plate -the Arctic sea ice cover- stressed by heterogeneous forcing terms like winds and ocean currents. It shows that the sea ice deformation rate depends on the scales of observation following specific space and time scaling laws. These scaling properties share similarities with those observed for turbulent fluids, especially for the ocean and the atmosphere. However, in our case, the time scaling exponent depends on the spatial scale, and the spatial exponent on the temporal scale, which implies a time/space coupling. An analysis of the exponent values shows that Arctic sea ice deformation is very heterogeneous and intermittent whatever the scales, i.e. it cannot be considered as viscous-like, even at very large time and/or spatial scales. Instead, it suggests a deformation accommodated by a multi-scale fracturing/faulting processes.

  12. Scaling properties of Arctic sea ice deformation in high-resolution viscous-plastic sea ice models and satellite observations

    NASA Astrophysics Data System (ADS)

    Hutter, Nils; Losch, Martin; Menemenlis, Dimitris

    2017-04-01

    Sea ice models with the traditional viscous-plastic (VP) rheology and very high grid resolution can resolve leads and deformation rates that are localised along Linear Kinematic Features (LKF). In a 1-km pan-Arctic sea ice-ocean simulation, the small scale sea-ice deformations in the Central Arctic are evaluated with a scaling analysis in relation to satellite observations of the Envisat Geophysical Processor System (EGPS). A new coupled scaling analysis for data on Eulerian grids determines the spatial and the temporal scaling as well as the coupling between temporal and spatial scales. The spatial scaling of the modelled sea ice deformation implies multi-fractality. The spatial scaling is also coupled to temporal scales and varies realistically by region and season. The agreement of the spatial scaling and its coupling to temporal scales with satellite observations and models with the modern elasto-brittle rheology challenges previous results with VP models at coarse resolution where no such scaling was found. The temporal scaling analysis, however, shows that the VP model does not fully resolve the intermittency of sea ice deformation that is observed in satellite data.

  13. Monitoring of Vegetation Impact Due to Trampling on Cadillac Mountain Summit Using High Spatial Resolution Remote Sensing Data Sets

    NASA Astrophysics Data System (ADS)

    Kim, Min-Kook; Daigle, John J.

    2012-11-01

    Cadillac Mountain—the highest peak along the eastern seaboard of the United States—is a major tourist destination in Acadia National Park, Maine. Managing vegetation impact due to trampling on the Cadillac Mountain summit is extremely challenging because of the large number of visitors and the general open nature of landscape in this fragile subalpine environmental setting. Since 2000, more intensive management strategies—based on placing physical barriers and educational messages for visitors—have been employed to protect threatened vegetation, decrease vegetation impact, and enhance vegetation recovery in the vicinity of the summit loop trail. The primary purpose of this study was to evaluate the effect of the management strategies employed. For this purpose, vegetation cover changes between 2001 and 2007 were detected using multispectral high spatial resolution remote sensing data sets. A normalized difference vegetation index was employed to identify the rates of increase and decrease in the vegetation areas. Three buffering distances (30, 60, and 90 m) from the edges of the trail were used to define multiple spatial extents of the site, and the same spatial extents were employed at a nearby control site that had no visitors. No significant differences were detected between the mean rates of vegetation increase and decrease at the experimental site compared with a nearby control site in the case of a small spatial scale (≤30 m) comparison (in all cases P > 0.05). However, in the medium (≤60 m) and large (≤90 m) spatial scales, the rates of increased vegetation were significantly greater and rates of decreased vegetation significantly lower at the experimental site compared with the control site (in all cases P < 0.001). Research implications are explored that relate to the spatial extent of the radial patterns of impact of trampling on vegetation at the site level. Management implications are explored in terms of the spatial strategies used to decrease the impact of trampling on vegetation.

  14. Monitoring of vegetation impact due to trampling on Cadillac Mountain summit using high spatial resolution remote sensing data sets.

    PubMed

    Kim, Min-Kook; Daigle, John J

    2012-11-01

    Cadillac Mountain--the highest peak along the eastern seaboard of the United States--is a major tourist destination in Acadia National Park, Maine. Managing vegetation impact due to trampling on the Cadillac Mountain summit is extremely challenging because of the large number of visitors and the general open nature of landscape in this fragile subalpine environmental setting. Since 2000, more intensive management strategies--based on placing physical barriers and educational messages for visitors--have been employed to protect threatened vegetation, decrease vegetation impact, and enhance vegetation recovery in the vicinity of the summit loop trail. The primary purpose of this study was to evaluate the effect of the management strategies employed. For this purpose, vegetation cover changes between 2001 and 2007 were detected using multispectral high spatial resolution remote sensing data sets. A normalized difference vegetation index was employed to identify the rates of increase and decrease in the vegetation areas. Three buffering distances (30, 60, and 90 m) from the edges of the trail were used to define multiple spatial extents of the site, and the same spatial extents were employed at a nearby control site that had no visitors. No significant differences were detected between the mean rates of vegetation increase and decrease at the experimental site compared with a nearby control site in the case of a small spatial scale (≤30 m) comparison (in all cases P > 0.05). However, in the medium (≤60 m) and large (≤90 m) spatial scales, the rates of increased vegetation were significantly greater and rates of decreased vegetation significantly lower at the experimental site compared with the control site (in all cases P < 0.001). Research implications are explored that relate to the spatial extent of the radial patterns of impact of trampling on vegetation at the site level. Management implications are explored in terms of the spatial strategies used to decrease the impact of trampling on vegetation.

  15. Multiscale spatial and small-scale temporal variation in the composition of Riverine fish communities.

    PubMed

    Growns, Ivor; Astles, Karen; Gehrke, Peter

    2006-03-01

    We studied the multiscale (sites, river reaches and rivers) and short-term temporal (monthly) variability in a freshwater fish assemblage. We found that small-scale spatial variation and short-term temporal variability significantly influenced fish community structure in the Macquarie and Namoi Rivers. However, larger scale spatial differences between rivers were the largest source of variation in the data. The interaction between temporal change and spatial variation in fish community structure, whilst statistically significant, was smaller than the variation between rivers. This suggests that although the fish communities within each river changed between sampling occasions, the underlying differences between rivers were maintained. In contrast, the strongest interaction between temporal and spatial effects occurred at the smallest spatial scale, at the level of individual sites. This means whilst the composition of the fish assemblage at a given site may fluctuate, the magnitude of these changes is unlikely to affect larger scale differences between reaches within rivers or between rivers. These results suggest that sampling at any time within a single season will be sufficient to show spatial differences that occur over large spatial scales, such as comparisons between rivers or between biogeographical regions.

  16. Spatial resolution requirements for urban land cover mapping from space

    NASA Technical Reports Server (NTRS)

    Todd, William J.; Wrigley, Robert C.

    1986-01-01

    Very low resolution (VLR) satellite data (Advanced Very High Resolution Radiometer, DMSP Operational Linescan System), low resolution (LR) data (Landsat MSS), medium resolution (MR) data (Landsat TM), and high resolution (HR) satellite data (Spot HRV, Large Format Camera) were evaluated and compared for interpretability at differing spatial resolutions. VLR data (500 m - 1.0 km) is useful for Level 1 (urban/rural distinction) mapping at 1:1,000,000 scale. Feature tone/color is utilized to distinguish generalized urban land cover using LR data (80 m) for 1:250,000 scale mapping. Advancing to MR data (30 m) and 1:100,000 scale mapping, confidence in land cover mapping is greatly increased, owing to the element of texture/pattern which is now evident in the imagery. Shape and shadow contribute to detailed Level II/III urban land use mapping possible if the interpreter can use HR (10-15 m) satellite data; mapping scales can be 1:25,000 - 1:50,000.

  17. A test of multiple hypotheses for the species richness gradient of South American owls.

    PubMed

    Diniz-Filho, José Alexandre Felizola; Rangel, Thiago F L V B; Hawkins, Bradford A

    2004-08-01

    Many mechanisms have been proposed to explain broad scale spatial patterns in species richness. In this paper, we evaluate five explanations for geographic gradients in species richness, using South American owls as a model. We compared the explanatory power of contemporary climate, landcover diversity, spatial climatic heterogeneity, evolutionary history, and area. An important aspect of our analyses is that very different hypotheses, such as history and area, can be quantified at the same observation scale and, consequently can be incorporated into a single analytical framework. Both area effects and owl phylogenetic history were poorly associated with richness, whereas contemporary climate, climatic heterogeneity at the mesoscale and landcover diversity explained ca. 53% of the variation in species richness. We conclude that both climate and environmental heterogeneity should be retained as plausible explanations for the diversity gradient. Turnover rates and scaling effects, on the other hand, although perhaps useful for detecting faunal changes and beta diversity at local and regional scales, are not strong explanations for the owl diversity gradient.

  18. Identification of the key ecological factors influencing vegetation degradation in semi-arid agro-pastoral ecotone considering spatial scales

    NASA Astrophysics Data System (ADS)

    Peng, Yu; Wang, Qinghui; Fan, Min

    2017-11-01

    When assessing re-vegetation project performance and optimizing land management, identification of the key ecological factors inducing vegetation degradation has crucial implications. Rainfall, temperature, elevation, slope, aspect, land use type, and human disturbance are ecological factors affecting the status of vegetation index. However, at different spatial scales, the key factors may vary. Using Helin County, Inner-Mongolia, China as the study site and combining remote sensing image interpretation, field surveying, and mathematical methods, this study assesses key ecological factors affecting vegetation degradation under different spatial scales in a semi-arid agro-pastoral ecotone. It indicates that the key factors are different at various spatial scales. Elevation, rainfall, and temperature are identified as crucial for all spatial extents. Elevation, rainfall and human disturbance are key factors for small-scale quadrats of 300 m × 300 m and 600 m × 600 m, temperature and land use type are key factors for a medium-scale quadrat of 1 km × 1 km, and rainfall, temperature, and land use are key factors for large-scale quadrats of 2 km × 2 km and 5 km × 5 km. For this region, human disturbance is not the key factor for vegetation degradation across spatial scales. It is necessary to consider spatial scale for the identification of key factors determining vegetation characteristics. The eco-restoration programs at various spatial scales should identify key influencing factors according their scales so as to take effective measurements. The new understanding obtained in this study may help to explore the forces which driving vegetation degradation in the degraded regions in the world.

  19. Satellite measurements reveal strong anisotropy in spatial coherence of climate variations over the Tibet Plateau.

    PubMed

    Chen, Deliang; Tian, Yudong; Yao, Tandong; Ou, Tinghai

    2016-08-24

    This study uses high-resolution, long-term satellite observations to evaluate the spatial scales of the climate variations across the Tibet Plateau (TP). Both land surface temperature and precipitation observations of more than 10 years were analysed with a special attention to eight existing ice-core sites in the TP. The temporal correlation for the monthly or annual anomalies between any two points decreases exponentially with their spatial distance, and we used the e-folding decay constant to quantify the spatial scales. We found that the spatial scales are strongly direction-dependent, with distinctive patterns in the west-east and south-north orientations, for example. Meanwhile, in the same directions the scales are largely symmetric backward and forward. Focusing on the west-east and south-north directions, we found the spatial coherence in the first is generally stronger than in the second. The annual surface temperature had typical spatial scales of 302-480 km, while the annual precipitation showed smaller scales of 111-182 km. The majority of the eight ice-core sites exhibit scales much smaller than the typical scales over the TP as a whole. These results provide important observational basis for the selection of appropriate downscaling strategies, deployment of climate-data collection networks, and interpreting paleoclimate reconstructions.

  20. Satellite measurements reveal strong anisotropy in spatial coherence of climate variations over the Tibet Plateau

    NASA Astrophysics Data System (ADS)

    Chen, Deliang; Tian, Yudong; Yao, Tandong; Ou, Tinghai

    2016-08-01

    This study uses high-resolution, long-term satellite observations to evaluate the spatial scales of the climate variations across the Tibet Plateau (TP). Both land surface temperature and precipitation observations of more than 10 years were analysed with a special attention to eight existing ice-core sites in the TP. The temporal correlation for the monthly or annual anomalies between any two points decreases exponentially with their spatial distance, and we used the e-folding decay constant to quantify the spatial scales. We found that the spatial scales are strongly direction-dependent, with distinctive patterns in the west-east and south-north orientations, for example. Meanwhile, in the same directions the scales are largely symmetric backward and forward. Focusing on the west-east and south-north directions, we found the spatial coherence in the first is generally stronger than in the second. The annual surface temperature had typical spatial scales of 302-480 km, while the annual precipitation showed smaller scales of 111-182 km. The majority of the eight ice-core sites exhibit scales much smaller than the typical scales over the TP as a whole. These results provide important observational basis for the selection of appropriate downscaling strategies, deployment of climate-data collection networks, and interpreting paleoclimate reconstructions.

  1. Satellite measurements reveal strong anisotropy in spatial coherence of climate variations over the Tibet Plateau

    PubMed Central

    Chen, Deliang; Tian, Yudong; Yao, Tandong; Ou, Tinghai

    2016-01-01

    This study uses high-resolution, long-term satellite observations to evaluate the spatial scales of the climate variations across the Tibet Plateau (TP). Both land surface temperature and precipitation observations of more than 10 years were analysed with a special attention to eight existing ice-core sites in the TP. The temporal correlation for the monthly or annual anomalies between any two points decreases exponentially with their spatial distance, and we used the e-folding decay constant to quantify the spatial scales. We found that the spatial scales are strongly direction-dependent, with distinctive patterns in the west-east and south-north orientations, for example. Meanwhile, in the same directions the scales are largely symmetric backward and forward. Focusing on the west-east and south-north directions, we found the spatial coherence in the first is generally stronger than in the second. The annual surface temperature had typical spatial scales of 302–480 km, while the annual precipitation showed smaller scales of 111–182 km. The majority of the eight ice-core sites exhibit scales much smaller than the typical scales over the TP as a whole. These results provide important observational basis for the selection of appropriate downscaling strategies, deployment of climate-data collection networks, and interpreting paleoclimate reconstructions. PMID:27553388

  2. Patterns and scaling properties of surface soil moisture in an agricultural landscape: An ecohydrological modeling study

    NASA Astrophysics Data System (ADS)

    Korres, W.; Reichenau, T. G.; Schneider, K.

    2013-08-01

    Soil moisture is a key variable in hydrology, meteorology and agriculture. Soil moisture, and surface soil moisture in particular, is highly variable in space and time. Its spatial and temporal patterns in agricultural landscapes are affected by multiple natural (precipitation, soil, topography, etc.) and agro-economic (soil management, fertilization, etc.) factors, making it difficult to identify unequivocal cause and effect relationships between soil moisture and its driving variables. The goal of this study is to characterize and analyze the spatial and temporal patterns of surface soil moisture (top 20 cm) in an intensively used agricultural landscape (1100 km2 northern part of the Rur catchment, Western Germany) and to determine the dominant factors and underlying processes controlling these patterns. A second goal is to analyze the scaling behavior of surface soil moisture patterns in order to investigate how spatial scale affects spatial patterns. To achieve these goals, a dynamically coupled, process-based and spatially distributed ecohydrological model was used to analyze the key processes as well as their interactions and feedbacks. The model was validated for two growing seasons for the three main crops in the investigation area: Winter wheat, sugar beet, and maize. This yielded RMSE values for surface soil moisture between 1.8 and 7.8 vol.% and average RMSE values for all three crops of 0.27 kg m-2 for total aboveground biomass and 0.93 for green LAI. Large deviations of measured and modeled soil moisture can be explained by a change of the infiltration properties towards the end of the growing season, especially in maize fields. The validated model was used to generate daily surface soil moisture maps, serving as a basis for an autocorrelation analysis of spatial patterns and scale. Outside of the growing season, surface soil moisture patterns at all spatial scales depend mainly upon soil properties. Within the main growing season, larger scale patterns that are induced by soil properties are superimposed by the small scale land use pattern and the resulting small scale variability of evapotranspiration. However, this influence decreases at larger spatial scales. Most precipitation events cause temporarily higher surface soil moisture autocorrelation lengths at all spatial scales for a short time even beyond the autocorrelation lengths induced by soil properties. The relation of daily spatial variance to the spatial scale of the analysis fits a power law scaling function, with negative values of the scaling exponent, indicating a decrease in spatial variability with increasing spatial resolution. High evapotranspiration rates cause an increase in the small scale soil moisture variability, thus leading to large negative values of the scaling exponent. Utilizing a multiple regression analysis, we found that 53% of the variance of the scaling exponent can be explained by a combination of an independent LAI parameter and the antecedent precipitation.

  3. Predicting probability of occurrence and factors affecting distribution and abundance of three Ozark endemic crayfish species at multiple spatial scales

    USGS Publications Warehouse

    Nolen, Matthew S.; Magoulick, Daniel D.; DiStefano, Robert J.; Imhoff, Emily M.; Wagner, Brian K.

    2014-01-01

    We found that a range of environmental variables were important in predicting crayfish distribution and abundance at multiple spatial scales and their importance was species-, response variable- and scale dependent. We would encourage others to examine the influence of spatial scale on species distribution and abundance patterns.

  4. Impact of scale on morphological spatial pattern of forest

    Treesearch

    Katarzyna Ostapowicz; Peter Vogt; Kurt H. Riitters; Jacek Kozak; Christine Estreguil

    2008-01-01

    Assessing and monitoring landscape pattern structure from multi-scale land-cover maps can utilize morphological spatial pattern analysis (MSPA), only if various influences of scale are known and taken into account. This paper lays part of the foundation for applying MSPA analysis in landscape monitoring by quantifying scale effects on six classes of spatial patterns...

  5. Metacommunity versus Biogeography: A Case Study of Two Groups of Neotropical Vegetation-Dwelling Arthropods

    PubMed Central

    Gonçalves-Souza, Thiago; Romero, Gustavo Q.; Cottenie, Karl

    2014-01-01

    Biogeography and metacommunity ecology provide two different perspectives on species diversity. Both are spatial in nature but their spatial scales do not necessarily match. With recent boom of metacommunity studies, we see an increasing need for clear discrimination of spatial scales relevant for both perspectives. This discrimination is a necessary prerequisite for improved understanding of ecological phenomena across scales. Here we provide a case study to illustrate some spatial scale-dependent concepts in recent metacommunity studies and identify potential pitfalls. We presented here the diversity patterns of Neotropical lepidopterans and spiders viewed both from metacommunity and biogeographical perspectives. Specifically, we investigated how the relative importance of niche- and dispersal-based processes for community assembly change at two spatial scales: metacommunity scale, i.e. within a locality, and biogeographical scale, i.e. among localities widely scattered along a macroclimatic gradient. As expected, niche-based processes dominated the community assembly at metacommunity scale, while dispersal-based processes played a major role at biogeographical scale for both taxonomical groups. However, we also observed small but significant spatial effects at metacommunity scale and environmental effects at biogeographical scale. We also observed differences in diversity patterns between the two taxonomical groups corresponding to differences in their dispersal modes. Our results thus support the idea of continuity of processes interactively shaping diversity patterns across scales and emphasize the necessity of integration of metacommunity and biogeographical perspectives. PMID:25549332

  6. Polymorphic mountain whitefish (Prosopium williamsoni) in a coastal riverscape: size class assemblages, distribution, and habitat associations

    USGS Publications Warehouse

    Starr, James C.; Torgersen, Christian E.

    2015-01-01

    We compared the assemblage structure, spatial distributions, and habitat associations of mountain whitefish (Prosopium williamsoni) morphotypes and size classes. We hypothesised that morphotypes would have different spatial distributions and would be associated with different habitat features based on feeding behaviour and diet. Spatially continuous sampling was conducted over a broad extent (29 km) in the Calawah River, WA (USA). Whitefish were enumerated via snorkelling in three size classes: small (10–29 cm), medium (30–49 cm), and large (≥50 cm). We identified morphotypes based on head and snout morphology: a pinocchio form that had an elongated snout and a normal form with a blunted snout. Large size classes of both morphotypes were distributed downstream of small and medium size classes, and normal whitefish were distributed downstream of pinocchio whitefish. Ordination of whitefish assemblages with nonmetric multidimensional scaling revealed that normal whitefish size classes were associated with higher gradient and depth, whereas pinocchio whitefish size classes were positively associated with pool area, distance upstream, and depth. Reach-scale generalised additive models indicated that normal whitefish relative density was associated with larger substrate size in downstream reaches (R2 = 0.64), and pinocchio whitefish were associated with greater stream depth in the reaches farther upstream (R2 = 0.87). These results suggest broad-scale spatial segregation (1–10 km), particularly between larger and more phenotypically extreme individuals. These results provide the first perspective on spatial distributions and habitat relationships of polymorphic mountain whitefish.

  7. Spatial scale, means and gradients of hydrographic variables define pelagic seascapes of bluefin and bullet tuna spawning distribution.

    PubMed

    Alvarez-Berastegui, Diego; Ciannelli, Lorenzo; Aparicio-Gonzalez, Alberto; Reglero, Patricia; Hidalgo, Manuel; López-Jurado, Jose Luis; Tintoré, Joaquín; Alemany, Francisco

    2014-01-01

    Seascape ecology is an emerging discipline focused on understanding how features of the marine habitat influence the spatial distribution of marine species. However, there is still a gap in the development of concepts and techniques for its application in the marine pelagic realm, where there are no clear boundaries delimitating habitats. Here we demonstrate that pelagic seascape metrics defined as a combination of hydrographic variables and their spatial gradients calculated at an appropriate spatial scale, improve our ability to model pelagic fish distribution. We apply the analysis to study the spawning locations of two tuna species: Atlantic bluefin and bullet tuna. These two species represent a gradient in life history strategies. Bluefin tuna has a large body size and is a long-distant migrant, while bullet tuna has a small body size and lives year-round in coastal waters within the Mediterranean Sea. The results show that the models performance incorporating the proposed seascape metrics increases significantly when compared with models that do not consider these metrics. This improvement is more important for Atlantic bluefin, whose spawning ecology is dependent on the local oceanographic scenario, than it is for bullet tuna, which is less influenced by the hydrographic conditions. Our study advances our understanding of how species perceive their habitat and confirms that the spatial scale at which the seascape metrics provide information is related to the spawning ecology and life history strategy of each species.

  8. Spatial Working Memory Ability in Individuals at Ultra High Risk for Psychosis

    PubMed Central

    Goghari, Vina M.; Brett, Caroline; Tabraham, Paul; Johns, Louise; Valmaggia, Lucia; Broome, Matthew; Woolley, James; Bramon, Elvira; Howes, Oliver

    2014-01-01

    The goal of this investigation was to clarify the nature of spatial working memory difficulties in individuals at ultra high risk (UHR) for psychosis. We evaluated spatial working memory and intelligence in 96 individuals at UHR for psychosis, 28 patients with first episode psychosis (FEP), and 23 healthy controls. Fourteen UHR individuals developed a psychotic disorder during follow-up. Compared to controls, the UHR group was impaired in both the short-term maintenance of material and in the effective use of strategy, but not more immediate memory. These impairments were not as severe as those in the FEP group, as the UHR group performed better than the FEP group. A similar pattern of results was found for the intelligence measures. Discriminant function analyses demonstrated short-term maintenance of material significantly differentiated the UHR and healthy control groups even when accounting for full scale intelligence quotient (IQ); whereas full scale IQ significantly differentiated the UHR and FEP groups and FEP and control groups. Notably, within the UHR group, impaired spatial working memory performance was associated with lower global functioning, but not full scale IQ. The subgroup of UHR individuals who later developed psychosis was not significantly more impaired on any aspect of working memory performance than the group of UHR individuals who did not develop psychosis. Given, the relationship between spatial working memory deficits and functional outcome, these results indicate that cognitive remediation could be useful in individuals at UHR for psychosis to potentially improve functioning. PMID:24398256

  9. Multi-sensor fusion of Landsat 8 thermal infrared (TIR) and panchromatic (PAN) images.

    PubMed

    Jung, Hyung-Sup; Park, Sung-Whan

    2014-12-18

    Data fusion is defined as the combination of data from multiple sensors such that the resulting information is better than would be possible when the sensors are used individually. The multi-sensor fusion of panchromatic (PAN) and thermal infrared (TIR) images is a good example of this data fusion. While a PAN image has higher spatial resolution, a TIR one has lower spatial resolution. In this study, we have proposed an efficient method to fuse Landsat 8 PAN and TIR images using an optimal scaling factor in order to control the trade-off between the spatial details and the thermal information. We have compared the fused images created from different scaling factors and then tested the performance of the proposed method at urban and rural test areas. The test results show that the proposed method merges the spatial resolution of PAN image and the temperature information of TIR image efficiently. The proposed method may be applied to detect lava flows of volcanic activity, radioactive exposure of nuclear power plants, and surface temperature change with respect to land-use change.

  10. Multi-scale responses of soil stability and invasive plants to removal of non-native grazers from an arid conservation reserve

    USGS Publications Warehouse

    Beever, Erik A.; Huso, Manuela M. P.; Pyke, David A.

    2006-01-01

    Disturbances and ecosystem recovery from disturbance both involve numerous processes that operate on multiple spatial and temporal scales. Few studies have investigated how gradients of disturbance intensity and ecosystem responses are distributed across multiple spatial resolutions and also how this relationship changes through time during recovery. We investigated how cover of non-native species and soil-aggregate stability (a measure of vulnerability to erosion by water) in surface and subsurface soils varied spatially during grazing by burros and cattle and whether patterns in these variables changed after grazer removal from Mojave National Preserve, California, USA. We compared distance from water and number of ungulate defecations — metrics of longer-term and recent grazing intensity, respectively, — as predictors of our response variables. We used information-theoretic analyses to compare hierarchical linear models that accounted for important covariates and allowed for interannual variation in the disturbance–response relationship at local and landscape scales. Soil stability was greater under perennial vegetation than in bare interspaces, and surface soil stability decreased with increasing numbers of ungulate defecations. Stability of surface samples was more affected by time since removal of grazers than was stability of subsurface samples, and subsurface soil stability in bare spaces was not related to grazing intensity, time since removal, or any of our other predictors. In the high rainfall year (2003) after cattle had been removed for 1–2 years, cover of all non-native plants averaged nine times higher than in the low-rainfall year (2002). Given the heterogeneity in distribution of large-herbivore impacts that we observed at several resolutions, hierarchical analyses provided a more complete understanding of the spatial and temporal complexities of disturbance and recovery processes in arid ecosystems.

  11. Evaluating neighborhood structures for modeling intercity diffusion of large-scale dengue epidemics.

    PubMed

    Wen, Tzai-Hung; Hsu, Ching-Shun; Hu, Ming-Che

    2018-05-03

    Dengue fever is a vector-borne infectious disease that is transmitted by contact between vector mosquitoes and susceptible hosts. The literature has addressed the issue on quantifying the effect of individual mobility on dengue transmission. However, there are methodological concerns in the spatial regression model configuration for examining the effect of intercity-scale human mobility on dengue diffusion. The purposes of the study are to investigate the influence of neighborhood structures on intercity epidemic progression from pre-epidemic to epidemic periods and to compare definitions of different neighborhood structures for interpreting the spread of dengue epidemics. We proposed a framework for assessing the effect of model configurations on dengue incidence in 2014 and 2015, which were the most severe outbreaks in 70 years in Taiwan. Compared with the conventional model configuration in spatial regression analysis, our proposed model used a radiation model, which reflects population flow between townships, as a spatial weight to capture the structure of human mobility. The results of our model demonstrate better model fitting performance, indicating that the structure of human mobility has better explanatory power in dengue diffusion than the geometric structure of administration boundaries and geographic distance between centroids of cities. We also identified spatial-temporal hierarchy of dengue diffusion: dengue incidence would be influenced by its immediate neighboring townships during pre-epidemic and epidemic periods, and also with more distant neighbors (based on mobility) in pre-epidemic periods. Our findings suggest that the structure of population mobility could more reasonably capture urban-to-urban interactions, which implies that the hub cities could be a "bridge" for large-scale transmission and make townships that immediately connect to hub cities more vulnerable to dengue epidemics.

  12. Comparison of spatial association approaches for landscape mapping of soil organic carbon stocks

    NASA Astrophysics Data System (ADS)

    Miller, B. A.; Koszinski, S.; Wehrhan, M.; Sommer, M.

    2015-03-01

    The distribution of soil organic carbon (SOC) can be variable at small analysis scales, but consideration of its role in regional and global issues demands the mapping of large extents. There are many different strategies for mapping SOC, among which is to model the variables needed to calculate the SOC stock indirectly or to model the SOC stock directly. The purpose of this research is to compare direct and indirect approaches to mapping SOC stocks from rule-based, multiple linear regression models applied at the landscape scale via spatial association. The final products for both strategies are high-resolution maps of SOC stocks (kg m-2), covering an area of 122 km2, with accompanying maps of estimated error. For the direct modelling approach, the estimated error map was based on the internal error estimations from the model rules. For the indirect approach, the estimated error map was produced by spatially combining the error estimates of component models via standard error propagation equations. We compared these two strategies for mapping SOC stocks on the basis of the qualities of the resulting maps as well as the magnitude and distribution of the estimated error. The direct approach produced a map with less spatial variation than the map produced by the indirect approach. The increased spatial variation represented by the indirect approach improved R2 values for the topsoil and subsoil stocks. Although the indirect approach had a lower mean estimated error for the topsoil stock, the mean estimated error for the total SOC stock (topsoil + subsoil) was lower for the direct approach. For these reasons, we recommend the direct approach to modelling SOC stocks be considered a more conservative estimate of the SOC stocks' spatial distribution.

  13. Comparison of spatial association approaches for landscape mapping of soil organic carbon stocks

    NASA Astrophysics Data System (ADS)

    Miller, B. A.; Koszinski, S.; Wehrhan, M.; Sommer, M.

    2014-11-01

    The distribution of soil organic carbon (SOC) can be variable at small analysis scales, but consideration of its role in regional and global issues demands the mapping of large extents. There are many different strategies for mapping SOC, among which are to model the variables needed to calculate the SOC stock indirectly or to model the SOC stock directly. The purpose of this research is to compare direct and indirect approaches to mapping SOC stocks from rule-based, multiple linear regression models applied at the landscape scale via spatial association. The final products for both strategies are high-resolution maps of SOC stocks (kg m-2), covering an area of 122 km2, with accompanying maps of estimated error. For the direct modelling approach, the estimated error map was based on the internal error estimations from the model rules. For the indirect approach, the estimated error map was produced by spatially combining the error estimates of component models via standard error propagation equations. We compared these two strategies for mapping SOC stocks on the basis of the qualities of the resulting maps as well as the magnitude and distribution of the estimated error. The direct approach produced a map with less spatial variation than the map produced by the indirect approach. The increased spatial variation represented by the indirect approach improved R2 values for the topsoil and subsoil stocks. Although the indirect approach had a lower mean estimated error for the topsoil stock, the mean estimated error for the total SOC stock (topsoil + subsoil) was lower for the direct approach. For these reasons, we recommend the direct approach to modelling SOC stocks be considered a more conservative estimate of the SOC stocks' spatial distribution.

  14. The relationship between observational scale and explained variance in benthic communities

    PubMed Central

    Flood, Roger D.; Frisk, Michael G.; Garza, Corey D.; Lopez, Glenn R.; Maher, Nicole P.

    2018-01-01

    This study addresses the impact of spatial scale on explaining variance in benthic communities. In particular, the analysis estimated the fraction of community variation that occurred at a spatial scale smaller than the sampling interval (i.e., the geographic distance between samples). This estimate is important because it sets a limit on the amount of community variation that can be explained based on the spatial configuration of a study area and sampling design. Six benthic data sets were examined that consisted of faunal abundances, common environmental variables (water depth, grain size, and surficial percent cover), and sonar backscatter treated as a habitat proxy (categorical acoustic provinces). Redundancy analysis was coupled with spatial variograms generated by multiscale ordination to quantify the explained and residual variance at different spatial scales and within and between acoustic provinces. The amount of community variation below the sampling interval of the surveys (< 100 m) was estimated to be 36–59% of the total. Once adjusted for this small-scale variation, > 71% of the remaining variance was explained by the environmental and province variables. Furthermore, these variables effectively explained the spatial structure present in the infaunal community. Overall, no scale problems remained to compromise inferences, and unexplained infaunal community variation had no apparent spatial structure within the observational scale of the surveys (> 100 m), although small-scale gradients (< 100 m) below the observational scale may be present. PMID:29324746

  15. Techniques for spatio-temporal analysis of vegetation fires in the topical belt of Africa

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brivio, P.A.; Ober, G.; Koffi, B.

    1995-12-31

    Biomass burning of forests and savannas is a phenomenon of continental or even global proportions, capable of causing large scale environmental changes. Satellite space observations, in particular from NOAA-AVHRR GAC data, are the only source of information allowing one to document burning patterns at regional and continental scale and over long periods of time. This paper presents some techniques, such as clustering and rose-diagram, useful in the spatial-temporal analysis of satellite derived fires maps to characterize the evolution of spatial patterns of vegetation fires at regional scale. An automatic clustering approach is presented which enables one to describe and parameterizemore » spatial distribution of fire patterns at different scales. The problem of geographical distribution of vegetation fires with respect to some location of interest, point or line, is also considered and presented. In particular rose-diagrams are used to relate fires patterns to some reference point, as experimental sites of tropospheric chemistry measurements. Different temporal data-sets in the tropical belt of Africa, covering both Northern and Southern Hemisphere dry seasons, using these techniques were analyzed and showed very promising results when compared with data from rain chemistry studies at different sampling sites in the equatorial forest.« less

  16. Consistency Between Sun-Induced Chlorophyll Fluorescence and Gross Primary Production of Vegetation in North America

    NASA Technical Reports Server (NTRS)

    Zhang, Yao; Xiao, Xiangming; Jin, Cui; Dong, Jinwei; Zhou, Sha; Wagle, Pradeep; Joiner, Joanna; Guanter, Luis; Zhang, Yongguang; Zhang , Geli; hide

    2016-01-01

    Accurate estimation of the gross primary production (GPP) of terrestrial ecosystems is vital for a better understanding of the spatial-temporal patterns of the global carbon cycle. In this study,we estimate GPP in North America (NA) using the satellite-based Vegetation Photosynthesis Model (VPM), MODIS (Moderate Resolution Imaging Spectrometer) images at 8-day temporal and 500 meter spatial resolutions, and NCEP-NARR (National Center for Environmental Prediction-North America Regional Reanalysis) climate data. The simulated GPP (GPP (sub VPM)) agrees well with the flux tower derived GPP (GPPEC) at 39 AmeriFlux sites (155 site-years). The GPP (sub VPM) in 2010 is spatially aggregated to 0.5 by 0.5-degree grid cells and then compared with sun-induced chlorophyll fluorescence (SIF) data from Global Ozone Monitoring Instrument 2 (GOME-2), which is directly related to vegetation photosynthesis. Spatial distribution and seasonal dynamics of GPP (sub VPM) and GOME-2 SIF show good consistency. At the biome scale, GPP (sub VPM) and SIF shows strong linear relationships (R (sup 2) is greater than 0.95) and small variations in regression slopes ((4.60-5.55 grams Carbon per square meter per day) divided by (milliwatts per square meter per nanometer per square radian)). The total annual GPP (sub VPM) in NA in 2010 is approximately 13.53 petagrams Carbon per year, which accounts for approximately 11.0 percent of the global terrestrial GPP and is within the range of annual GPP estimates from six other process-based and data-driven models (11.35-22.23 petagrams Carbon per year). Among the seven models, some models did not capture the spatial pattern of GOME-2 SIF data at annual scale, especially in Midwest cropland region. The results from this study demonstrate the reliable performance of VPM at the continental scale, and the potential of SIF data being used as a benchmark to compare with GPP models.

  17. Spatial structure and nest demography reveal the influence of competition, parasitism and habitat quality on slavemaking ants and their hosts

    PubMed Central

    2011-01-01

    Background Natural communities are structured by intra-guild competition, predation or parasitism and the abiotic environment. We studied the relative importance of these factors in two host-social parasite ecosystems in three ant communities in Europe (Bavaria) and North America (New York, West Virginia). We tested how these factors affect colony demography, life-history and the spatial pattern of colonies, using a large sample size of more than 1000 colonies. The strength of competition was measured by the distance to the nearest competitor. Distance to the closest social parasite colony was used as a measure of parasitism risk. Nest sites (i.e., sticks or acorns) are limited in these forest ecosystems and we therefore included nest site quality as an abiotic factor in the analysis. In contrast to previous studies based on local densities, we focus here on the positioning and spatial patterns and we use models to compare our predictions to random expectations. Results Colony demography was universally affected by the size of the nest site with larger and more productive colonies residing in larger nest sites of higher quality. Distance to the nearest competitor negatively influenced host demography and brood production in the Bavarian community, pointing to an important role of competition, while social parasitism was less influential in this community. The New York community was characterized by the highest habitat variability, and productive colonies were clustered in sites of higher quality. Colonies were clumped on finer spatial scales, when we considered only the nearest neighbors, but more regularly distributed on coarser scales. The analysis of spatial positioning within plots often produced different results compared to those based on colony densities. For example, while host and slavemaker densities are often positively correlated, slavemakers do not nest closer to potential host colonies than expected by random. Conclusions The three communities are differently affected by biotic and abiotic factors. Some of the differences can be attributed to habitat differences and some to differences between the two slavemaking-host ecosystems. The strong effect of competition in the Bavarian community points to the scarcity of resources in this uniform habitat compared to the other more diverse sites. The decrease in colony aggregation with scale indicates fine-scale resource hotspots: colonies are locally aggregated in small groups. Our study demonstrates that species relationships vary across scales and spatial patterns can provide important insights into species interactions. These results could not have been obtained with analyses based on local densities alone. Previous studies focused on social parasitism and its effect on host colonies. The broader approach taken here, considering several possible factors affecting colony demography and not testing each one in isolation, shows that competition and environmental variability can have a similar strong impact on demography and life-history of hosts. We conclude that the effects of parasites or predators should be studied in parallel to other ecological influences. PMID:21443778

  18. Spatial structure and nest demography reveal the influence of competition, parasitism and habitat quality on slavemaking ants and their hosts.

    PubMed

    Scharf, Inon; Fischer-Blass, Birgit; Foitzik, Susanne

    2011-03-28

    Natural communities are structured by intra-guild competition, predation or parasitism and the abiotic environment. We studied the relative importance of these factors in two host-social parasite ecosystems in three ant communities in Europe (Bavaria) and North America (New York, West Virginia). We tested how these factors affect colony demography, life-history and the spatial pattern of colonies, using a large sample size of more than 1000 colonies. The strength of competition was measured by the distance to the nearest competitor. Distance to the closest social parasite colony was used as a measure of parasitism risk. Nest sites (i.e., sticks or acorns) are limited in these forest ecosystems and we therefore included nest site quality as an abiotic factor in the analysis. In contrast to previous studies based on local densities, we focus here on the positioning and spatial patterns and we use models to compare our predictions to random expectations. Colony demography was universally affected by the size of the nest site with larger and more productive colonies residing in larger nest sites of higher quality. Distance to the nearest competitor negatively influenced host demography and brood production in the Bavarian community, pointing to an important role of competition, while social parasitism was less influential in this community. The New York community was characterized by the highest habitat variability, and productive colonies were clustered in sites of higher quality. Colonies were clumped on finer spatial scales, when we considered only the nearest neighbors, but more regularly distributed on coarser scales. The analysis of spatial positioning within plots often produced different results compared to those based on colony densities. For example, while host and slavemaker densities are often positively correlated, slavemakers do not nest closer to potential host colonies than expected by random. The three communities are differently affected by biotic and abiotic factors. Some of the differences can be attributed to habitat differences and some to differences between the two slavemaking-host ecosystems. The strong effect of competition in the Bavarian community points to the scarcity of resources in this uniform habitat compared to the other more diverse sites. The decrease in colony aggregation with scale indicates fine-scale resource hotspots: colonies are locally aggregated in small groups. Our study demonstrates that species relationships vary across scales and spatial patterns can provide important insights into species interactions. These results could not have been obtained with analyses based on local densities alone. Previous studies focused on social parasitism and its effect on host colonies. The broader approach taken here, considering several possible factors affecting colony demography and not testing each one in isolation, shows that competition and environmental variability can have a similar strong impact on demography and life-history of hosts. We conclude that the effects of parasites or predators should be studied in parallel to other ecological influences.

  19. Analysing and correcting the differences between multi-source and multi-scale spatial remote sensing observations.

    PubMed

    Dong, Yingying; Luo, Ruisen; Feng, Haikuan; Wang, Jihua; Zhao, Jinling; Zhu, Yining; Yang, Guijun

    2014-01-01

    Differences exist among analysis results of agriculture monitoring and crop production based on remote sensing observations, which are obtained at different spatial scales from multiple remote sensors in same time period, and processed by same algorithms, models or methods. These differences can be mainly quantitatively described from three aspects, i.e. multiple remote sensing observations, crop parameters estimation models, and spatial scale effects of surface parameters. Our research proposed a new method to analyse and correct the differences between multi-source and multi-scale spatial remote sensing surface reflectance datasets, aiming to provide references for further studies in agricultural application with multiple remotely sensed observations from different sources. The new method was constructed on the basis of physical and mathematical properties of multi-source and multi-scale reflectance datasets. Theories of statistics were involved to extract statistical characteristics of multiple surface reflectance datasets, and further quantitatively analyse spatial variations of these characteristics at multiple spatial scales. Then, taking the surface reflectance at small spatial scale as the baseline data, theories of Gaussian distribution were selected for multiple surface reflectance datasets correction based on the above obtained physical characteristics and mathematical distribution properties, and their spatial variations. This proposed method was verified by two sets of multiple satellite images, which were obtained in two experimental fields located in Inner Mongolia and Beijing, China with different degrees of homogeneity of underlying surfaces. Experimental results indicate that differences of surface reflectance datasets at multiple spatial scales could be effectively corrected over non-homogeneous underlying surfaces, which provide database for further multi-source and multi-scale crop growth monitoring and yield prediction, and their corresponding consistency analysis evaluation.

  20. Analysing and Correcting the Differences between Multi-Source and Multi-Scale Spatial Remote Sensing Observations

    PubMed Central

    Dong, Yingying; Luo, Ruisen; Feng, Haikuan; Wang, Jihua; Zhao, Jinling; Zhu, Yining; Yang, Guijun

    2014-01-01

    Differences exist among analysis results of agriculture monitoring and crop production based on remote sensing observations, which are obtained at different spatial scales from multiple remote sensors in same time period, and processed by same algorithms, models or methods. These differences can be mainly quantitatively described from three aspects, i.e. multiple remote sensing observations, crop parameters estimation models, and spatial scale effects of surface parameters. Our research proposed a new method to analyse and correct the differences between multi-source and multi-scale spatial remote sensing surface reflectance datasets, aiming to provide references for further studies in agricultural application with multiple remotely sensed observations from different sources. The new method was constructed on the basis of physical and mathematical properties of multi-source and multi-scale reflectance datasets. Theories of statistics were involved to extract statistical characteristics of multiple surface reflectance datasets, and further quantitatively analyse spatial variations of these characteristics at multiple spatial scales. Then, taking the surface reflectance at small spatial scale as the baseline data, theories of Gaussian distribution were selected for multiple surface reflectance datasets correction based on the above obtained physical characteristics and mathematical distribution properties, and their spatial variations. This proposed method was verified by two sets of multiple satellite images, which were obtained in two experimental fields located in Inner Mongolia and Beijing, China with different degrees of homogeneity of underlying surfaces. Experimental results indicate that differences of surface reflectance datasets at multiple spatial scales could be effectively corrected over non-homogeneous underlying surfaces, which provide database for further multi-source and multi-scale crop growth monitoring and yield prediction, and their corresponding consistency analysis evaluation. PMID:25405760

  1. Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben

    Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

  2. Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

    DOE PAGES

    Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; ...

    2017-09-28

    Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

  3. Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

    NASA Astrophysics Data System (ADS)

    Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; Crump, Alex R.; Chen, Xingyuan; Hess, Nancy

    2017-09-01

    Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but only in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Combining such an approach with broader knowledge of thresholding behavior - here related to active layer depth - would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.

  4. Detecting changes in the spatial distribution of nitrate contamination in ground water

    USGS Publications Warehouse

    Liu, Z.-J.; Hallberg, G.R.; Zimmerman, D.L.; Libra, R.D.

    1997-01-01

    Many studies of ground water pollution in general and nitrate contamination in particular have often relied on a one-time investigation, tracking of individual wells, or aggregate summaries. Studies of changes in spatial distribution of contaminants over time are lacking. This paper presents a method to compare spatial distributions for possible changes over time. The large-scale spatial distribution at a given time can be considered as a surface over the area (a trend surface). The changes in spatial distribution from period to period can be revealed by the differences in the shape and/or height of surfaces. If such a surface is described by a polynomial function, changes in surfaces can be detected by testing statistically for differences in their corresponding polynomial functions. This method was applied to nitrate concentration in a population of wells in an agricultural drainage basin in Iowa, sampled in three different years. For the period of 1981-1992, the large-scale spatial distribution of nitrate concentration did not show significant change in the shape of spatial surfaces; while the magnitude of nitrate concentration in the basin, or height of the computed surfaces showed significant fluctuations. The change in magnitude of nitrate concentration is closely related to climatic variations, especially in precipitation. The lack of change in the shape of spatial surfaces means that either the influence of land use/nitrogen management was overshadowed by climatic influence, or the changes in land use/management occurred in a random fashion.

  5. DOE Office of Scientific and Technical Information (OSTI.GOV)

    O'Brien, Sarah L.; Gibbons, Sean M.; Owens, Sarah M.

    Soil microbial communities are essential for ecosystem function, but linking community composition to biogeochemical processes is challenging because of high microbial diversity and large spatial variability of most soil characteristics. We investigated soil bacterial community structure in a switchgrass stand planted on soil with a history of grassland vegetation at high spatial resolution to determine whether biogeographic trends occurred at the centimeter scale. Moreover, we tested whether such heterogeneity, if present, influenced community structure within or among ecosystems. Pronounced heterogeneity was observed at centimeter scales, with abrupt changes in relative abundance of phyla from sample to sample. At the ecosystemmore » scale (> 10 m), however, bacterial community composition and structure were subtly, but significantly, altered by fertilization, with higher alpha diversity in fertilized plots. Moreover, by comparing these data with data from 1772 soils from the Earth Microbiome Project, it was found that 20% diverse globally sourced soil samples, while grassland soils shared approximately 40% of their operational taxonomic units with the current study. By spanning several orders of magnitude, the analysis suggested that extreme patchiness characterized community structure at smaller scales but that coherent patterns emerged at larger length scales.« less

  6. An invariability-area relationship sheds new light on the spatial scaling of ecological stability.

    PubMed

    Wang, Shaopeng; Loreau, Michel; Arnoldi, Jean-Francois; Fang, Jingyun; Rahman, K Abd; Tao, Shengli; de Mazancourt, Claire

    2017-05-19

    The spatial scaling of stability is key to understanding ecological sustainability across scales and the sensitivity of ecosystems to habitat destruction. Here we propose the invariability-area relationship (IAR) as a novel approach to investigate the spatial scaling of stability. The shape and slope of IAR are largely determined by patterns of spatial synchrony across scales. When synchrony decays exponentially with distance, IARs exhibit three phases, characterized by steeper increases in invariability at both small and large scales. Such triphasic IARs are observed for primary productivity from plot to continental scales. When synchrony decays as a power law with distance, IARs are quasilinear on a log-log scale. Such quasilinear IARs are observed for North American bird biomass at both species and community levels. The IAR provides a quantitative tool to predict the effects of habitat loss on population and ecosystem stability and to detect regime shifts in spatial ecological systems, which are goals of relevance to conservation and policy.

  7. Spatial and Temporal scales of time-averaged 700 MB height anomalies

    NASA Technical Reports Server (NTRS)

    Gutzler, D.

    1981-01-01

    The monthly and seasonal forecasting technique is based to a large extent on the extrapolation of trends in the positions of the centers of time averaged geopotential height anomalies. The complete forecasted height pattern is subsequently drawn around the forecasted anomaly centers. The efficacy of this technique was tested and time series of observed monthly mean and 5 day mean 700 mb geopotential heights were examined. Autocorrelation statistics are generated to document the tendency for persistence of anomalies. These statistics are compared to a red noise hypothesis to check for evidence of possible preferred time scales of persistence. Space-time spectral analyses at middle latitudes are checked for evidence of periodicities which could be associated with predictable month-to-month trends. A local measure of the average spatial scale of anomalies is devised for guidance in the completion of the anomaly pattern around the forecasted centers.

  8. China’s Air Quality and Respiratory Disease Mortality Based on the Spatial Panel Model

    PubMed Central

    Cao, Qilong; Liang, Ying; Niu, Xueting

    2017-01-01

    Background: Air pollution has become an important factor restricting China’s economic development and has subsequently brought a series of social problems, including the impact of air pollution on the health of residents, which is a topical issue in China. Methods: Taking into account this spatial imbalance, the paper is based on the spatial panel data model PM2.5. Respiratory disease mortality in 31 Chinese provinces from 2004 to 2008 is taken as the main variable to study the spatial effect and impact of air quality and respiratory disease mortality on a large scale. Results: It was found that there is a spatial correlation between the mortality of respiratory diseases in Chinese provinces. The spatial correlation can be explained by the spatial effect of PM2.5 pollutions in the control of other variables. Conclusions: Compared with the traditional non-spatial model, the spatial model is better for describing the spatial relationship between variables, ensuring the conclusions are scientific and can measure the spatial effect between variables. PMID:28927016

  9. Accurate population genetic measurements require cryptic species identification in corals

    NASA Astrophysics Data System (ADS)

    Sheets, Elizabeth A.; Warner, Patricia A.; Palumbi, Stephen R.

    2018-06-01

    Correct identification of closely related species is important for reliable measures of gene flow. Incorrectly lumping individuals of different species together has been shown to over- or underestimate population differentiation, but examples highlighting when these different results are observed in empirical datasets are rare. Using 199 single nucleotide polymorphisms, we assigned 768 individuals in the Acropora hyacinthus and A. cytherea morphospecies complexes to each of eight previously identified cryptic genetic species and measured intraspecific genetic differentiation across three geographic scales (within reefs, among reefs within an archipelago, and among Pacific archipelagos). We then compared these calculations to estimated genetic differentiation at each scale with all cryptic genetic species mixed as if we could not tell them apart. At the reef scale, correct genetic species identification yielded lower F ST estimates and fewer significant comparisons than when species were mixed, raising estimates of short-scale gene flow. In contrast, correct genetic species identification at large spatial scales yielded higher F ST measurements than mixed-species comparisons, lowering estimates of long-term gene flow among archipelagos. A meta-analysis of published population genetic studies in corals found similar results: F ST estimates at small spatial scales were lower and significance was found less often in studies that controlled for cryptic species. Our results and these prior datasets controlling for cryptic species suggest that genetic differentiation among local reefs may be lower than what has generally been reported in the literature. Not properly controlling for cryptic species structure can bias population genetic analyses in different directions across spatial scales, and this has important implications for conservation strategies that rely on these estimates.

  10. Field Scale Spatial Modelling of Surface Soil Quality Attributes in Controlled Traffic Farming

    NASA Astrophysics Data System (ADS)

    Guenette, Kris; Hernandez-Ramirez, Guillermo

    2017-04-01

    The employment of controlled traffic farming (CTF) can yield improvements to soil quality attributes through the confinement of equipment traffic to tramlines with the field. There is a need to quantify and explain the spatial heterogeneity of soil quality attributes affected by CTF to further improve our understanding and modelling ability of field scale soil dynamics. Soil properties such as available nitrogen (AN), pH, soil total nitrogen (STN), soil organic carbon (SOC), bulk density, macroporosity, soil quality S-Index, plant available water capacity (PAWC) and unsaturated hydraulic conductivity (Km) were analysed and compared among trafficked and un-trafficked areas. We contrasted standard geostatistical methods such as ordinary kriging (OK) and covariate kriging (COK) as well as the hybrid method of regression kriging (ROK) to predict the spatial distribution of soil properties across two annual cropland sites actively employing CTF in Alberta, Canada. Field scale variability was quantified more accurately through the inclusion of covariates; however, the use of ROK was shown to improve model accuracy despite the regression model composition limiting the robustness of the ROK method. The exclusion of traffic from the un-trafficked areas displayed significant improvements to bulk density, macroporosity and Km while subsequently enhancing AN, STN and SOC. The ability of the regression models and the ROK method to account for spatial trends led to the highest goodness-of-fit and lowest error achieved for the soil physical properties, as the rigid traffic regime of CTF altered their spatial distribution at the field scale. Conversely, the COK method produced the most optimal predictions for the soil nutrient properties and Km. The use of terrain covariates derived from light ranging and detection (LiDAR), such as of elevation and topographic position index (TPI), yielded the best models in the COK method at the field scale.

  11. Advantages of a city-scale emission inventory for urban air quality research and policy: the case of Nanjing, a typical industrial city in the Yangtze River Delta, China

    NASA Astrophysics Data System (ADS)

    Zhao, Y.; Qiu, L. P.; Xu, R. Y.; Xie, F. J.; Zhang, Q.; Yu, Y. Y.; Nielsen, C. P.; Qin, H. X.; Wang, H. K.; Wu, X. C.; Li, W. Q.; Zhang, J.

    2015-11-01

    With most eastern Chinese cities facing major air quality challenges, there is a strong need for city-scale emission inventories for use in both chemical transport modeling and the development of pollution control policies. In this paper, a high-resolution emission inventory (with a horizontal resolution of 3 × 3 km) of air pollutants and CO2 for Nanjing, a typical large city in the Yangtze River Delta, is developed, incorporating the best available information on local sources. Emission factors and activity data at the unit or facility level are collected and compiled using a thorough on-site survey of major sources. Over 900 individual plants, which account for 97 % of the city's total coal consumption, are identified as point sources, and all of the emission-related parameters including combustion technology, fuel quality, and removal efficiency of air pollution control devices (APCD) are analyzed. New data-collection approaches including continuous emission monitoring systems and real-time monitoring of traffic flows are employed to improve spatiotemporal distribution of emissions. Despite fast growth of energy consumption between 2010 and 2012, relatively small interannual changes in emissions are found for most air pollutants during this period, attributed mainly to benefits of growing APCD deployment and the comparatively strong and improving regulatory oversight of the large point sources that dominate the levels and spatial distributions of Nanjing emissions overall. The improvement of this city-level emission inventory is indicated by comparisons with observations and other inventories at larger spatial scale. Relatively good spatial correlations are found for SO2, NOx, and CO between the city-scale emission estimates and concentrations at nine state-operated monitoring sites (R = 0.58, 0.46, and 0.61, respectively). The emission ratios of specific pollutants including BC to CO, OC to EC, and CO2 to CO compare well to top-down constraints from ground observations. The interannual variability and spatial distribution of NOx emissions are consistent with NO2 vertical column density measured by the Ozone Monitoring Instrument (OMI). In particular, the Nanjing city-scale emission inventory correlates better with satellite observations than the downscaled Multi-resolution Emission Inventory for China (MEIC) does when emissions from power plants are excluded. This indicates improvement in emission estimation for sectors other than power generation, notably industry and transportation. A high-resolution emission inventory may also provide a basis to consider the quality of instrumental observations. To further improve emission estimation and evaluation, more measurements of both emission factors and ambient levels of given pollutants are suggested; the uncertainties of emission inventories at city scale should also be fully quantified and compared with those at national scale.

  12. Advantages of city-scale emission inventory for urban air quality research and policy: the case of Nanjing, a typical industrial city in the Yangtze River Delta, China

    NASA Astrophysics Data System (ADS)

    Zhao, Y.; Qiu, L.; Xu, R.; Xie, F.; Zhang, Q.; Yu, Y.; Nielsen, C. P.; Qin, H.; Wang, H.; Wu, X.; Li, W.; Zhang, J.

    2015-07-01

    With most eastern Chinese cities facing major air quality challenges, there is a strong need for city-scale emission inventories for use in both chemical transport modeling and the development of pollution control policies. In this paper, a high-resolution emission inventory of air pollutants and CO2 for Nanjing, a typical large city in the Yangtze River Delta, is developed incorporating the best available information on local sources. Emission factors and activity data at the unit or facility level are collected and compiled using a thorough onsite survey of major sources. Over 900 individual plants, which account for 97 % of the city's total coal consumption, are identified as point sources, and all of the emission-related parameters including combustion technology, fuel quality, and removal efficiency of air pollution control devices (APCD) are analyzed. New data-collection approaches including continuous emission monitoring systems and real-time monitoring of traffic flows are employed to improve spatiotemporal distribution of emissions. Despite fast growth of energy consumption between 2010 and 2012, relatively small inter-annual changes in emissions are found for most air pollutants during this period, attributed mainly to benefits of growing APCD deployment and the comparatively strong and improving regulatory oversight of the large point sources that dominate the levels and spatial distributions of Nanjing emissions overall. The improvement of this city-level emission inventory is indicated by comparisons with observations and other inventories at larger spatial scale. Relatively good spatial correlations are found for SO2, NOx, and CO between the city-scale emission estimates and concentrations at 9 state-opertated monitoring sites (R = 0.58, 0.46, and 0.61, respectively). The emission ratios of specific pollutants including BC to CO, OC to EC, and CO2 to CO compare well to top-down constraints from ground observations. The inter-annual variability and spatial distribution of NOx emissions are consistent with NO2 vertical column density measured by the Ozone Monitoring Instrument (OMI). In particular, the Nanjing city-scale emission inventory correlates better with satellite observations than the downscaled Multi-resolution Emission Inventory for China (MEIC) does when emissions from power plants are excluded. This indicates improvement in emission estimation for sectors other than power generation, notably industry and transportation. High-resolution emission inventory may also provide a basis to consider the quality of instrumental observations. To further improve emission estimation and evaluation, more measurements of both emission factors and ambient levels of given pollutants are suggested; the uncertainties of emission inventories at city scale should also be fully quantified and compared with those at national scale.

  13. Integrating Space with Place in Health Research: A Multilevel Spatial Investigation Using Child Mortality in 1880 Newark, New Jersey

    PubMed Central

    Xu, Hongwei; Logan, John R.; Short, Susan E.

    2014-01-01

    Research on neighborhoods and health increasingly acknowledges the need to conceptualize, measure, and model spatial features of social and physical environments. In ignoring underlying spatial dynamics, we run the risk of biased statistical inference and misleading results. In this paper, we propose an integrated multilevel-spatial approach for Poisson models of discrete responses. In an empirical example of child mortality in 1880 Newark, New Jersey, we compare this multilevel-spatial approach with the more typical aspatial multilevel approach. Results indicate that spatially-defined egocentric neighborhoods, or distance-based measures, outperform administrative areal units, such as census units. In addition, although results did not vary by specific definitions of egocentric neighborhoods, they were sensitive to geographic scale and modeling strategy. Overall, our findings confirm that adopting a spatial-multilevel approach enhances our ability to disentangle the effect of space from that of place, and point to the need for more careful spatial thinking in population research on neighborhoods and health. PMID:24763980

  14. Scaling local species-habitat relations to the larger landscape with a hierarchical spatial count model

    USGS Publications Warehouse

    Thogmartin, W.E.; Knutson, M.G.

    2007-01-01

    Much of what is known about avian species-habitat relations has been derived from studies of birds at local scales. It is entirely unclear whether the relations observed at these scales translate to the larger landscape in a predictable linear fashion. We derived habitat models and mapped predicted abundances for three forest bird species of eastern North America using bird counts, environmental variables, and hierarchical models applied at three spatial scales. Our purpose was to understand habitat associations at multiple spatial scales and create predictive abundance maps for purposes of conservation planning at a landscape scale given the constraint that the variables used in this exercise were derived from local-level studies. Our models indicated a substantial influence of landscape context for all species, many of which were counter to reported associations at finer spatial extents. We found land cover composition provided the greatest contribution to the relative explained variance in counts for all three species; spatial structure was second in importance. No single spatial scale dominated any model, indicating that these species are responding to factors at multiple spatial scales. For purposes of conservation planning, areas of predicted high abundance should be investigated to evaluate the conservation potential of the landscape in their general vicinity. In addition, the models and spatial patterns of abundance among species suggest locations where conservation actions may benefit more than one species. ?? 2006 Springer Science+Business Media B.V.

  15. Modeling trends from North American Breeding Bird Survey data: a spatially explicit approach

    USGS Publications Warehouse

    Bled, Florent; Sauer, John R.; Pardieck, Keith L.; Doherty, Paul; Royle, J. Andy

    2013-01-01

    Population trends, defined as interval-specific proportional changes in population size, are often used to help identify species of conservation interest. Efficient modeling of such trends depends on the consideration of the correlation of population changes with key spatial and environmental covariates. This can provide insights into causal mechanisms and allow spatially explicit summaries at scales that are of interest to management agencies. We expand the hierarchical modeling framework used in the North American Breeding Bird Survey (BBS) by developing a spatially explicit model of temporal trend using a conditional autoregressive (CAR) model. By adopting a formal spatial model for abundance, we produce spatially explicit abundance and trend estimates. Analyses based on large-scale geographic strata such as Bird Conservation Regions (BCR) can suffer from basic imbalances in spatial sampling. Our approach addresses this issue by providing an explicit weighting based on the fundamental sample allocation unit of the BBS. We applied the spatial model to three species from the BBS. Species have been chosen based upon their well-known population change patterns, which allows us to evaluate the quality of our model and the biological meaning of our estimates. We also compare our results with the ones obtained for BCRs using a nonspatial hierarchical model (Sauer and Link 2011). Globally, estimates for mean trends are consistent between the two approaches but spatial estimates provide much more precise trend estimates in regions on the edges of species ranges that were poorly estimated in non-spatial analyses. Incorporating a spatial component in the analysis not only allows us to obtain relevant and biologically meaningful estimates for population trends, but also enables us to provide a flexible framework in order to obtain trend estimates for any area.

  16. Gray scale operation of a multichannel optical convolver using the Semetex magnetooptic spatial light modulator

    NASA Technical Reports Server (NTRS)

    Davis, Jeffrey A.; Day, Timothy; Lilly, Roger A.; Taber, Donald B.; Liu, Hua-Kuang

    1988-01-01

    A new multichannel optical correlator/convolver architecture which uses an acoustooptic light modulator for the input channel and a Semetex magnetooptic spatial light modulator (MOSLM) for the set of parallel reference channels is presented. Details of the anamorphic optical system are discussed. Experimental results illustrate the use of the system as a convolver for performing digital multiplication by analog convolution (DMAC). A limited gray scale capability for data stored by the MOSLM is demonstrated by implementing this DMAC algorithm with trinary logic. Use of the MOSLM allows the number of parallel channels for the convolver to be increased significantly compared with previously reported techniques while retaining the capability for updating both channels at high speeds.

  17. Gray Scale Operation Of A Multichannel Optical Convolver Using The Semetex Magnetooptic Spatial Light Modulator

    NASA Astrophysics Data System (ADS)

    Davis, Jeffrey A.; Day, Timothy; Lilly, Roger A.; Taber, Donald B.; Liu, Hua-Kuang; Davis, J. A.; Day, T.; Lilly, R. A.; Taber, D. B.; Liu, H.-K.

    1988-02-01

    We present a new multichannel optical correlator/convolver architecture which uses an acoustooptic light modulator (AOLM) for the input channel and a Semetex magnetooptic spatial light modulator (MOSLM) for the set of parallel reference channels. Details of the anamorphic optical system are discussed. Experimental results illustrate use of the system as a convolver for performing digital multiplication by analog convolution (DMAC). A limited gray scale capability for data stored by the MOSLM is demonstrated by implementing this DMAC algorithm with trinary logic. Use of the MOSLM allows the number of parallel channels for the convolver to be increased significantly compared with previously reported techniques while retaining the capability for updating both channels at high speeds.

  18. Gray scale operation of a multichannel optical convolver using the Semetex magnetooptic spatial light modulator

    NASA Astrophysics Data System (ADS)

    Davis, Jeffrey A.; Day, Timothy; Lilly, Roger A.; Taber, Donald B.; Liu, Hua-Kuang

    A new multichannel optical correlator/convolver architecture which uses an acoustooptic light modulator for the input channel and a Semetex magnetooptic spatial light modulator (MOSLM) for the set of parallel reference channels is presented. Details of the anamorphic optical system are discussed. Experimental results illustrate the use of the system as a convolver for performing digital multiplication by analog convolution (DMAC). A limited gray scale capability for data stored by the MOSLM is demonstrated by implementing this DMAC algorithm with trinary logic. Use of the MOSLM allows the number of parallel channels for the convolver to be increased significantly compared with previously reported techniques while retaining the capability for updating both channels at high speeds.

  19. Simulation of wave propagation in three-dimensional random media

    NASA Technical Reports Server (NTRS)

    Coles, William A.; Filice, J. P.; Frehlich, R. G.; Yadlowsky, M.

    1993-01-01

    Quantitative error analysis for simulation of wave propagation in three dimensional random media assuming narrow angular scattering are presented for the plane wave and spherical wave geometry. This includes the errors resulting from finite grid size, finite simulation dimensions, and the separation of the two-dimensional screens along the propagation direction. Simple error scalings are determined for power-law spectra of the random refractive index of the media. The effects of a finite inner scale are also considered. The spatial spectra of the intensity errors are calculated and compared to the spatial spectra of intensity. The numerical requirements for a simulation of given accuracy are determined for realizations of the field. The numerical requirements for accurate estimation of higher moments of the field are less stringent.

  20. Investigation of Kibble-Zurek Quench Dynamics in a Spin-1 Ferromagnetic BEC

    NASA Astrophysics Data System (ADS)

    Anquez, Martin; Robbins, Bryce; Hoang, Thai; Yang, Xiaoyun; Land, Benjamin; Hamley, Christopher; Chapman, Michael

    2014-05-01

    We study the temporal evolution of spin populations in small spin-1 87Rb condensates following a slow quench. A ferromagnetic spin-1 BEC exhibits a second-order gapless (quantum) phase transition due to a competition between the magnetic and collisional spin interaction energies. The dynamics of slow quenches through the critical point are predicted to exhibit universal power-law scaling as a function of quench speed. In spatially extended condensates, these excitations are revealed as spatial spin domains. In small condensates, the excitations are manifest in the temporal evolution of the spin populations, illustrating a Kibble-Zurek type scaling. We will present the results of our investigation and compare them to full quantum simulations of the system.

  1. Two-particle microrheology of quasi-2D viscous systems.

    PubMed

    Prasad, V; Koehler, S A; Weeks, Eric R

    2006-10-27

    We study the spatially correlated motions of colloidal particles in a quasi-2D system (human serum albumin protein molecules at an air-water interface) for different surface viscosities eta s. We observe a transition in the behavior of the correlated motion, from 2D interface dominated at high eta s to bulk fluid dependent at low eta s. The correlated motions can be scaled onto a master curve which captures the features of this transition. This master curve also characterizes the spatial dependence of the flow field of a viscous interface in response to a force. The scale factors used for the master curve allow for the calculation of the surface viscosity eta s that can be compared to one-particle measurements.

  2. Statistics of spatial derivatives of velocity and pressure in turbulent channel flow

    NASA Astrophysics Data System (ADS)

    Vreman, A. W.; Kuerten, J. G. M.

    2014-08-01

    Statistical profiles of the first- and second-order spatial derivatives of velocity and pressure are reported for turbulent channel flow at Reτ = 590. The statistics were extracted from a high-resolution direct numerical simulation. To quantify the anisotropic behavior of fine-scale structures, the variances of the derivatives are compared with the theoretical values for isotropic turbulence. It is shown that appropriate combinations of first- and second-order velocity derivatives lead to (directional) viscous length scales without explicit occurrence of the viscosity in the definitions. To quantify the non-Gaussian and intermittent behavior of fine-scale structures, higher-order moments and probability density functions of spatial derivatives are reported. Absolute skewnesses and flatnesses of several spatial derivatives display high peaks in the near wall region. In the logarithmic and central regions of the channel flow, all first-order derivatives appear to be significantly more intermittent than in isotropic turbulence at the same Taylor Reynolds number. Since the nine variances of first-order velocity derivatives are the distinct elements of the turbulence dissipation, the budgets of these nine variances are shown, together with the budget of the turbulence dissipation. The comparison of the budgets in the near-wall region indicates that the normal derivative of the fluctuating streamwise velocity (∂u'/∂y) plays a more important role than other components of the fluctuating velocity gradient. The small-scale generation term formed by triple correlations of fluctuations of first-order velocity derivatives is analyzed. A typical mechanism of small-scale generation near the wall (around y+ = 1), the intensification of positive ∂u'/∂y by local strain fluctuation (compression in normal and stretching in spanwise direction), is illustrated and discussed.

  3. Hotspots of Community Change: Temporal Dynamics Are Spatially Variable in Understory Plant Composition of a California Oak Woodland

    PubMed Central

    Spotswood, Erica N.; Bartolome, James W.; Allen-Diaz, Barbara

    2015-01-01

    Community response to external drivers such climate and disturbance can lead to fluctuations in community composition, or to directional change. Temporal dynamics can be influenced by a combination of drivers operating at multiple spatial scales, including external landscape scale drivers, local abiotic conditions, and local species pools. We hypothesized that spatial variation in these factors can create heterogeneity in temporal dynamics within landscapes. We used understory plant species composition from an 11 year dataset from a California oak woodland to compare plots where disturbance was experimentally manipulated with the removal of livestock grazing and a prescribed burn. We quantified three properties of temporal variation: compositional change (reflecting the appearance and disappearance of species), temporal fluctuation, and directional change. Directional change was related most strongly to disturbance type, and was highest at plots where grazing was removed during the study. Temporal fluctuations, compositional change, and directional change were all related to intrinsic abiotic factors, suggesting that some locations are more responsive to external drivers than others. Temporal fluctuations and compositional change were linked to local functional composition, indicating that environmental filters can create subsets of the local species pool that do not respond in the same way to external drivers. Temporal dynamics are often assumed to be relatively static at the landscape scale, provided disturbance and climate are continuous. This study shows that local and landscape scale factors jointly influence temporal dynamics creating hotspots that are particularly responsive to climate and disturbance. Thus, adequate predictions of response to disturbance or to changing climate will only be achieved by considering how factors at multiple spatial scales influence community resilience and recovery. PMID:26222069

  4. Hotspots of Community Change: Temporal Dynamics Are Spatially Variable in Understory Plant Composition of a California Oak Woodland.

    PubMed

    Spotswood, Erica N; Bartolome, James W; Allen-Diaz, Barbara

    2015-01-01

    Community response to external drivers such climate and disturbance can lead to fluctuations in community composition, or to directional change. Temporal dynamics can be influenced by a combination of drivers operating at multiple spatial scales, including external landscape scale drivers, local abiotic conditions, and local species pools. We hypothesized that spatial variation in these factors can create heterogeneity in temporal dynamics within landscapes. We used understory plant species composition from an 11 year dataset from a California oak woodland to compare plots where disturbance was experimentally manipulated with the removal of livestock grazing and a prescribed burn. We quantified three properties of temporal variation: compositional change (reflecting the appearance and disappearance of species), temporal fluctuation, and directional change. Directional change was related most strongly to disturbance type, and was highest at plots where grazing was removed during the study. Temporal fluctuations, compositional change, and directional change were all related to intrinsic abiotic factors, suggesting that some locations are more responsive to external drivers than others. Temporal fluctuations and compositional change were linked to local functional composition, indicating that environmental filters can create subsets of the local species pool that do not respond in the same way to external drivers. Temporal dynamics are often assumed to be relatively static at the landscape scale, provided disturbance and climate are continuous. This study shows that local and landscape scale factors jointly influence temporal dynamics creating hotspots that are particularly responsive to climate and disturbance. Thus, adequate predictions of response to disturbance or to changing climate will only be achieved by considering how factors at multiple spatial scales influence community resilience and recovery.

  5. Cities, traffic, and CO 2: A multidecadal assessment of trends, drivers, and scaling relationships

    DOE PAGES

    Gately, Conor K.; Hutyra, Lucy R.; Sue Wing, Ian

    2015-04-06

    Emissions of CO 2 from road vehicles were 1.57 billion metric tons in 2012, accounting for 28% of US fossil fuel CO 2 emissions, but the spatial distributions of these emissions are highly uncertain. We develop a new emissions inventory, the Database of Road Transportation Emissions (DARTE), which estimates CO 2 emitted by US road transport at a resolution of 1 km annually for 1980-2012. DARTE reveals that urban areas are responsible for 80% of on-road emissions growth since 1980 and for 63% of total 2012 emissions. We observe nonlinearities between CO 2 emissions and population density at broad spatial/temporalmore » scales, with total on-road CO 2 increasing nonlinearly with population density, rapidly up to 1,650 persons per square kilometer and slowly thereafter. Per capita emissions decline as density rises, but at markedly varying rates depending on existing densities. Here, we make use of DARTE's bottom-up construction to highlight the biases associated with the common practice of using population as a linear proxy for disaggregating national- or state-scale emissions. Comparing DARTE with existing downscaled inventories, we find biases of 100% or more in the spatial distribution of urban and rural emissions, largely driven by mismatches between inventory downscaling proxies and the actual spatial patterns of vehicle activity at urban scales. Here, given cities' dual importance as sources of CO 2 and an emerging nexus of climate mitigation initiatives, high-resolution estimates such as DARTE are critical both for accurately quantifying surface carbon fluxes and for verifying the effectiveness of emissions mitigation efforts at urban scales.« less

  6. Using radiocarbon to investigate soil respiration impacts on atmospheric CO2

    NASA Astrophysics Data System (ADS)

    Phillips, C. L.; LaFranchi, B. W.; McFarlane, K. J.; Desai, A. R.

    2013-12-01

    While soil respiration is believed to represent the largest single source of CO2 emissions on a global scale, there are few tools available to measure soil emissions at large spatial scales. We investigated whether radiocarbon (14C) abundance in CO2 could be used to detect and characterize soil emissions in the atmosphere, taking advantage of the fact that 14C abundance in soil carbon is elevated compared to the background atmosphere, a result of thermonuclear weapons testing during the mid-20th Century (i.e. bomb-C). Working in a temperate hardwood forest in Northern Wisconsin during 2011-12, we made semi-high-frequency measurements of CO2 at nested spatial scales from the soil subsurface to 150 m above ground level. These measurements were used to investigate seasonal patterns in respired C sources, and to evaluate whether variability in soil-respired Δ14C could also be detected in atmospheric measurements. In our ground-level measurements we found large seasonal variation in soil-respired 14CO2 that correlated with soil moisture, which was likely related to root activity. Atmospheric measurements of 14CO2 in the forest canopy (2 to 30m) were used to construct Keeling plots, and these provided larger spatial-scale estimates of respired 14CO2 that largely agreed with the soil-level measurements. In collaboration with the NOAA we also examined temporal patterns of 14CO2 at the Park Falls tall-tower (150m), and found elevated 14CO2 levels during summer months that likely resulted from increased respiration from heterotrophic sources. These results demonstrate that a fingerprint from soil-respired CO2 can be detected in the seasonal patterns of atmospheric 14CO2, even at a regionally-integrating spatial scale far from the soil surface.

  7. Characterizing local biological hotspots in the Gulf of Maine using remote sensing data

    NASA Astrophysics Data System (ADS)

    Ribera, Marta M.

    Researchers increasingly advocate the use of ecosystem-based management (EBM) for managing complex marine ecosystems. This approach requires managers to focus on processes and cross-scale interactions, rather than individual components. However, they often lack appropriate tools and data sources to pursue this change in management approach. One method that has been proposed to understand the ecological complexity inherent in marine ecosystems is the study of biological hotspots. Biological hotspots are locations where organisms from different trophic levels aggregate to feed on abundant supplies, and they are considered a first step toward understanding the processes driving spatial and temporal heterogeneity in marine systems. Biological hotspots are supported by phytoplankton aggregations, which are characterized by high spatial and temporal variability. As a result, methods developed to locate biological hotspots in relatively stable terrestrial systems are not well suited for more dynamic marine ecosystems. The main objective of this thesis is thus to identify and characterize local-scale biological hotspots in the western side of the Gulf of Maine. The first chapter describes a new methodological framework with the steps needed to locate these types of hotspots in marine ecosystems using remote sensing datasets. Then, in the second chapter these hotspots are characterized using a novel metric that uses time series information and spatial statistics to account for both the temporal variability and spatial structure of these marine aggregations. This metric redefines biological hotspots as areas with a high probability of exhibiting positive anomalies of productivity compared to the expected regional seasonal pattern. Finally, the third chapter compares the resulting biological hotspots to fishery-dependent abundance indices of surface and benthic predators to determine the effect of the location and magnitude of phytoplankton aggregations on the rest of the ecosystem. Analyses indicate that the spatial scale and magnitude of biological hotspots in the Gulf of Maine depend on the location and time of the year. Results also show that these hotspots change over time in response to both short-term oceanographic processes and long-term climatic cycles. Finally, the new metric presented here facilitates the spatial comparison between different trophic levels, thus allowing interdisciplinary ecosystem-wide studies.

  8. Scaling properties of sea ice deformation from buoy dispersion analysis

    NASA Astrophysics Data System (ADS)

    Rampal, P.; Weiss, J.; Marsan, D.; Lindsay, R.; Stern, H.

    2008-03-01

    A temporal and spatial scaling analysis of Arctic sea ice deformation is performed over timescales from 3 h to 3 months and over spatial scales from 300 m to 300 km. The deformation is derived from the dispersion of pairs of drifting buoys, using the IABP (International Arctic Buoy Program) buoy data sets. This study characterizes the deformation of a very large solid plate (the Arctic sea ice cover) stressed by heterogeneous forcing terms like winds and ocean currents. It shows that the sea ice deformation rate depends on the scales of observation following specific space and time scaling laws. These scaling properties share similarities with those observed for turbulent fluids, especially for the ocean and the atmosphere. However, in our case, the time scaling exponent depends on the spatial scale, and the spatial exponent on the temporal scale, which implies a time/space coupling. An analysis of the exponent values shows that Arctic sea ice deformation is very heterogeneous and intermittent whatever the scales, i.e., it cannot be considered as viscous-like, even at very large time and/or spatial scales. Instead, it suggests a deformation accommodated by a multiscale fracturing/faulting processes.

  9. Spatial and Temporal Uncertainty of Crop Yield Aggregations

    NASA Technical Reports Server (NTRS)

    Porwollik, Vera; Mueller, Christoph; Elliott, Joshua; Chryssanthacopoulos, James; Iizumi, Toshichika; Ray, Deepak K.; Ruane, Alex C.; Arneth, Almut; Balkovic, Juraj; Ciais, Philippe; hide

    2016-01-01

    The aggregation of simulated gridded crop yields to national or regional scale requires information on temporal and spatial patterns of crop-specific harvested areas. This analysis estimates the uncertainty of simulated gridded yield time series related to the aggregation with four different harvested area data sets. We compare aggregated yield time series from the Global Gridded Crop Model Inter-comparison project for four crop types from 14 models at global, national, and regional scale to determine aggregation-driven differences in mean yields and temporal patterns as measures of uncertainty. The quantity and spatial patterns of harvested areas differ for individual crops among the four datasets applied for the aggregation. Also simulated spatial yield patterns differ among the 14 models. These differences in harvested areas and simulated yield patterns lead to differences in aggregated productivity estimates, both in mean yield and in the temporal dynamics. Among the four investigated crops, wheat yield (17% relative difference) is most affected by the uncertainty introduced by the aggregation at the global scale. The correlation of temporal patterns of global aggregated yield time series can be as low as for soybean (r = 0.28).For the majority of countries, mean relative differences of nationally aggregated yields account for10% or less. The spatial and temporal difference can be substantial higher for individual countries. Of the top-10 crop producers, aggregated national multi-annual mean relative difference of yields can be up to 67% (maize, South Africa), 43% (wheat, Pakistan), 51% (rice, Japan), and 427% (soybean, Bolivia).Correlations of differently aggregated yield time series can be as low as r = 0.56 (maize, India), r = 0.05*Corresponding (wheat, Russia), r = 0.13 (rice, Vietnam), and r = -0.01 (soybean, Uruguay). The aggregation to sub-national scale in comparison to country scale shows that spatial uncertainties can cancel out in countries with large harvested areas per crop type. We conclude that the aggregation uncertainty can be substantial for crop productivity and production estimations in the context of food security, impact assessment, and model evaluation exercises.

  10. Dissecting the multi-scale spatial relationship of earthworm assemblages with soil environmental variability.

    PubMed

    Jiménez, Juan J; Decaëns, Thibaud; Lavelle, Patrick; Rossi, Jean-Pierre

    2014-12-05

    Studying the drivers and determinants of species, population and community spatial patterns is central to ecology. The observed structure of community assemblages is the result of deterministic abiotic (environmental constraints) and biotic factors (positive and negative species interactions), as well as stochastic colonization events (historical contingency). We analyzed the role of multi-scale spatial component of soil environmental variability in structuring earthworm assemblages in a gallery forest from the Colombian "Llanos". We aimed to disentangle the spatial scales at which species assemblages are structured and determine whether these scales matched those expressed by soil environmental variables. We also tested the hypothesis of the "single tree effect" by exploring the spatial relationships between root-related variables and soil nutrient and physical variables in structuring earthworm assemblages. Multivariate ordination techniques and spatially explicit tools were used, namely cross-correlograms, Principal Coordinates of Neighbor Matrices (PCNM) and variation partitioning analyses. The relationship between the spatial organization of earthworm assemblages and soil environmental parameters revealed explicitly multi-scale responses. The soil environmental variables that explained nested population structures across the multi-spatial scale gradient differed for earthworms and assemblages at the very-fine- (<10 m) to medium-scale (10-20 m). The root traits were correlated with areas of high soil nutrient contents at a depth of 0-5 cm. Information on the scales of PCNM variables was obtained using variogram modeling. Based on the size of the plot, the PCNM variables were arbitrarily allocated to medium (>30 m), fine (10-20 m) and very fine scales (<10 m). Variation partitioning analysis revealed that the soil environmental variability explained from less than 1% to as much as 48% of the observed earthworm spatial variation. A large proportion of the spatial variation did not depend on the soil environmental variability for certain species. This finding could indicate the influence of contagious biotic interactions, stochastic factors, or unmeasured relevant soil environmental variables.

  11. Detecting spatial regimes in ecosystems | Science Inventory ...

    EPA Pesticide Factsheets

    Research on early warning indicators has generally focused on assessing temporal transitions with limited application of these methods to detecting spatial regimes. Traditional spatial boundary detection procedures that result in ecoregion maps are typically based on ecological potential (i.e. potential vegetation), and often fail to account for ongoing changes due to stressors such as land use change and climate change and their effects on plant and animal communities. We use Fisher information, an information theory based method, on both terrestrial and aquatic animal data (US Breeding Bird Survey and marine zooplankton) to identify ecological boundaries, and compare our results to traditional early warning indicators, conventional ecoregion maps, and multivariate analysis such as nMDS (non-metric Multidimensional Scaling) and cluster analysis. We successfully detect spatial regimes and transitions in both terrestrial and aquatic systems using Fisher information. Furthermore, Fisher information provided explicit spatial information about community change that is absent from other multivariate approaches. Our results suggest that defining spatial regimes based on animal communities may better reflect ecological reality than do traditional ecoregion maps, especially in our current era of rapid and unpredictable ecological change. Use an information theory based method to identify ecological boundaries and compare our results to traditional early warning

  12. High-Resolution Subtropical Summer Precipitation Derived from Dynamical Downscaling of the NCEP-DOE Reanalysis: How Much Small-Scale Information Is Added by a Regional Model?

    NASA Technical Reports Server (NTRS)

    Lim, Young-Kwon; Stefanova, Lydia B.; Chan, Steven C.; Schubert, Siegfried D.; OBrien, James J.

    2010-01-01

    This study assesses the regional-scale summer precipitation produced by the dynamical downscaling of analyzed large-scale fields. The main goal of this study is to investigate how much the regional model adds smaller scale precipitation information that the large-scale fields do not resolve. The modeling region for this study covers the southeastern United States (Florida, Georgia, Alabama, South Carolina, and North Carolina) where the summer climate is subtropical in nature, with a heavy influence of regional-scale convection. The coarse resolution (2.5deg latitude/longitude) large-scale atmospheric variables from the National Center for Environmental Prediction (NCEP)/DOE reanalysis (R2) are downscaled using the NCEP Environmental Climate Prediction Center regional spectral model (RSM) to produce precipitation at 20 km resolution for 16 summer seasons (19902005). The RSM produces realistic details in the regional summer precipitation at 20 km resolution. Compared to R2, the RSM-produced monthly precipitation shows better agreement with observations. There is a reduced wet bias and a more realistic spatial pattern of the precipitation climatology compared with the interpolated R2 values. The root mean square errors of the monthly R2 precipitation are reduced over 93 (1,697) of all the grid points in the five states (1,821). The temporal correlation also improves over 92 (1,675) of all grid points such that the domain-averaged correlation increases from 0.38 (R2) to 0.55 (RSM). The RSM accurately reproduces the first two observed eigenmodes, compared with the R2 product for which the second mode is not properly reproduced. The spatial patterns for wet versus dry summer years are also successfully simulated in RSM. For shorter time scales, the RSM resolves heavy rainfall events and their frequency better than R2. Correlation and categorical classification (above/near/below average) for the monthly frequency of heavy precipitation days is also significantly improved by the RSM.

  13. Analysis of risk factors for T. brucei rhodesiense sleeping sickness within villages in south-east Uganda

    PubMed Central

    Zoller, Thomas; Fèvre, Eric M; Welburn, Susan C; Odiit, Martin; Coleman, Paul G

    2008-01-01

    Background Sleeping sickness (HAT) caused by T.b. rhodesiense is a major veterinary and human public health problem in Uganda. Previous studies have investigated spatial risk factors for T.b. rhodesiense at large geographic scales, but none have properly investigated such risk factors at small scales, i.e. within affected villages. In the present work, we use a case-control methodology to analyse both behavioural and spatial risk factors for HAT in an endemic area. Methods The present study investigates behavioural and occupational risk factors for infection with HAT within villages using a questionnaire-based case-control study conducted in 17 villages endemic for HAT in SE Uganda, and spatial risk factors in 4 high risk villages. For the spatial analysis, the location of homesteads with one or more cases of HAT up to three years prior to the beginning of the study was compared to all non-case homesteads. Analysing spatial associations with respect to irregularly shaped geographical objects required the development of a new approach to geographical analysis in combination with a logistic regression model. Results The study was able to identify, among other behavioural risk factors, having a family member with a history of HAT (p = 0.001) as well as proximity of a homestead to a nearby wetland area (p < 0.001) as strong risk factors for infection. The novel method of analysing complex spatial interactions used in the study can be applied to a range of other diseases. Conclusion Spatial risk factors for HAT are maintained across geographical scales; this consistency is useful in the design of decision support tools for intervention and prevention of the disease. Familial aggregation of cases was confirmed for T. b. rhodesiense HAT in the study and probably results from shared behavioural and spatial risk factors amongmembers of a household. PMID:18590541

  14. Adaptation of a pattern-scaling approach for assessment of local (village/valley) scale water resources and related vulnerabilities in the Upper Indus Basin

    NASA Astrophysics Data System (ADS)

    Forsythe, Nathan; Kilsby, Chris G.; Fowler, Hayley J.; Archer, David R.

    2010-05-01

    The water resources of the Upper Indus Basin (UIB) are of the utmost importance to the economic wellbeing of Pakistan. The irrigated agriculture made possible by Indus river runoff underpins the food security for Pakistan's nearly 200 million people. Contributions from hydropower account for more than one fifth of peak installed electrical generating capacity in a country where widespread, prolonged load-shedding handicaps business activity and industrial development. Pakistan's further socio-economic development thus depends largely on optimisation of its precious water resources. Confident, accurate seasonal predictions of water resource availability coupled with sound understanding of interannual variability are urgent insights needed by development planners and infrastructure managers at all levels. This study focuses on the challenge of providing meaningful quantitative information at the village/valley scale in the upper reaches of the UIB. Proceeding by progressive reductions in scale, the typology of the observed UIB hydrological regimes -- glacial, nival and pluvial -- are examined with special emphasis on interannual variability for individual seasons. Variations in discharge (runoff) are compared to observations of climate parameters (temperature, precipitation) and available spatial data (elevation, snow cover and snow-water-equivalent). The first scale presented is composed of the large-scale, long-record gauged UIB tributary basins. The Pakistan Water and Power Development Authority (WAPDA) has maintained these stations for several decades in order to monitor seasonal flows and accumulate data for design of further infrastructure. Data from basins defined by five gauging stations on the Indus, Hunza, Gilgit and Astore rivers are examined. The second scale presented is a set of smaller gauged headwater catchments with short records. These gauges were installed by WAPDA and its partners amongst the international development agencies to assess potential sites for medium-scale infrastructure projects. These catchments are placed in their context within the hydrological regime classification using the spatial data and (remote sensing) observations as well as river gauging measurements. The study assesses the degree of similarity with the larger basins of the same hydrological regime. This assessment focuses on the measured response to observed climate variable anomalies. The smallest scale considered is comprised of a number of case studies at the ungauged village/valley scale. These examples are based on the delineation of areas to which specific communities (villages) have customary (riparian) water rights. These examples were suggested by non-governmental organisations working on grassroots economic development initiatives and small-scale infrastructure projects in the region. The direct observations available for these subcatchments are limited to spatial data (elevation, snow parameters). The challenge at this level is to accurately extrapolate areal values (precipitation, temperature, runoff) from point observations at the basin scale. The study assesses both the degree of similarity in the distribution of spatial parameters to the larger gauged basins and the interannual variability (spatial heterogeneity) of remotely-sensed snow cover and snow-water-equivalent at this subcatchment scale. Based upon the characterisation of spatial and interannual variability at these three spatial scales, the challenges facing local water resource managers and infrastructure operators are enumerated. Local vulnerabilities include, but are not limited to, varying thresholds in irrigation water requirements based on crop-type, minimum base flows for micro-hydropower generation during winter (high load) months and relatively small but growing demand for domestic water usage. In conclusion the study posits potential strategies for managing interannual variability and potential emerging trends. Suggested strategies are guided by the principles of low-risk adaptation, participative decision making and local capacity building.

  15. Studies and Application of Remote Sensing Retrieval Method of Soil Moisture Content in Land Parcel Units in Irrigation Area

    NASA Astrophysics Data System (ADS)

    Zhu, H.; Zhao, H. L.; Jiang, Y. Z.; Zang, W. B.

    2018-05-01

    Soil moisture is one of the important hydrological elements. Obtaining soil moisture accurately and effectively is of great significance for water resource management in irrigation area. During the process of soil moisture content retrieval with multiremote sensing data, multi- remote sensing data always brings multi-spatial scale problems which results in inconformity of soil moisture content retrieved by remote sensing in different spatial scale. In addition, agricultural water use management has suitable spatial scale of soil moisture information so as to satisfy the demands of dynamic management of water use and water demand in certain unit. We have proposed to use land parcel unit as the minimum unit to do soil moisture content research in agricultural water using area, according to soil characteristics, vegetation coverage characteristics in underlying layer, and hydrological characteristic into the basis of study unit division. We have proposed division method of land parcel units. Based on multi thermal infrared and near infrared remote sensing data, we calculate the ndvi and tvdi index and make a statistical model between the tvdi index and soil moisture of ground monitoring station. Then we move forward to study soil moisture remote sensing retrieval method on land parcel unit scale. And the method has been applied in Hetao irrigation area. Results show that compared with pixel scale the soil moisture content in land parcel unit scale has displayed stronger correlation with true value. Hence, remote sensing retrieval method of soil moisture content in land parcel unit scale has shown good applicability in Hetao irrigation area. We converted the research unit into the scale of land parcel unit. Using the land parcel units with unified crops and soil attributes as the research units more complies with the characteristics of agricultural water areas, avoids the problems such as decomposition of mixed pixels and excessive dependence on high-resolution data caused by the research units of pixels, and doesn't involve compromises in the spatial scale and simulating precision like the grid simulation. When the application needs are met, the production efficiency of products can also be improved at a certain degree.

  16. Imaging electronic trap states in perovskite thin films with combined fluorescence and femtosecond transient absorption microscopy

    DOE PAGES

    Xiao, Kai; Ma, Ying -Zhong; Simpson, Mary Jane; ...

    2016-04-22

    Charge carrier trapping degrades the performance of organometallic halide perovskite solar cells. To characterize the locations of electronic trap states in a heterogeneous photoactive layer, a spatially resolved approach is essential. Here, we report a comparative study on methylammonium lead tri-iodide perovskite thin films subject to different thermal annealing times using a combined photoluminescence (PL) and femtosecond transient absorption microscopy (TAM) approach to spatially map trap states. This approach coregisters the initially populated electronic excited states with the regions that recombine radiatively. Although the TAM images are relatively homogeneous for both samples, the corresponding PL images are highly structured. Themore » remarkable variation in the PL intensities as compared to transient absorption signal amplitude suggests spatially dependent PL quantum efficiency, indicative of trapping events. Furthermore, detailed analysis enables identification of two trapping regimes: a densely packed trapping region and a sparse trapping area that appear as unique spatial features in scaled PL maps.« less

  17. Fire structures pine serotiny at different scales.

    PubMed

    Hernández-Serrano, Ana; Verdú, Miguel; González-Martínez, Santiago C; Pausas, Juli G

    2013-12-01

    Serotiny (delayed seed release with the consequent accumulation of a canopy seedbank) confers fitness benefits in environments with crown-fire regimes. Thus, we predicted that serotiny level should be higher in populations recurrently subjected to crown-fires than in populations where crown-fires are rare. In addition, under a high frequency of fires, space and resources are recurrently available, permitting recruitment around each mother to follow the seed rain shadow. Thus, we also predicted spatial aggregation of serotiny within populations. We compared serotiny, considering both the proportion and the age of serotinous cones, in populations living in contrasting fire regimes for two iconic Mediterranean pine species (Pinus halepensis, P. pinaster). We framed our results by quantitatively comparing the strength of the fire-serotiny relationship with previous studies worldwide. For the two species, populations living under high crown-fire recurrence regimes had a higher serotiny level than those populations where the recurrence of crown-fires was low. For P. halepensis (the species with higher serotiny), populations in high fire recurrence regimes had higher fine-scale spatial aggregation of serotiny than those inhabiting low fire recurrence systems. The strength of the observed fire-serotiny relationship in P. halepensis is among the highest in published literature. Fire regime shapes serotiny level among populations, and in populations with high serotiny, recurrent fires maintain a significant spatial structure for this trait. Consequently, fire has long-term evolutionary implications at different scales, emphasizing its prominent role in shaping the ecology of pines.

  18. Statistical analysis of corn yields responding to climate variability at various spatio-temporal resolutions

    NASA Astrophysics Data System (ADS)

    Jiang, H.; Lin, T.

    2017-12-01

    Rain-fed corn production systems are subject to sub-seasonal variations of precipitation and temperature during the growing season. As each growth phase has varied inherent physiological process, plants necessitate different optimal environmental conditions during each phase. However, this temporal heterogeneity towards climate variability alongside the lifecycle of crops is often simplified and fixed as constant responses in large scale statistical modeling analysis. To capture the time-variant growing requirements in large scale statistical analysis, we develop and compare statistical models at various spatial and temporal resolutions to quantify the relationship between corn yield and weather factors for 12 corn belt states from 1981 to 2016. The study compares three spatial resolutions (county, agricultural district, and state scale) and three temporal resolutions (crop growth phase, monthly, and growing season) to characterize the effects of spatial and temporal variability. Our results show that the agricultural district model together with growth phase resolution can explain 52% variations of corn yield caused by temperature and precipitation variability. It provides a practical model structure balancing the overfitting problem in county specific model and weak explanation power in state specific model. In US corn belt, precipitation has positive impact on corn yield in growing season except for vegetative stage while extreme heat attains highest sensitivity from silking to dough phase. The results show the northern counties in corn belt area are less interfered by extreme heat but are more vulnerable to water deficiency.

  19. Submesoscale Sea Surface Temperature Variability from UAV and Satellite Measurements

    NASA Astrophysics Data System (ADS)

    Castro, S. L.; Emery, W. J.; Tandy, W., Jr.; Good, W. S.

    2017-12-01

    Technological advances in spatial resolution of observations have revealed the importance of short-lived ocean processes with scales of O(1km). These submesoscale processes play an important role for the transfer of energy from the meso- to small scales and for generating significant spatial and temporal intermittency in the upper ocean, critical for the mixing of the oceanic boundary layer. Submesoscales have been observed in sea surface temperatures (SST) from satellites. Satellite SST measurements are spatial averages over the footprint of the satellite. When the variance of the SST distribution within the footprint is small, the average value is representative of the SST over the whole pixel. If the variance is large, the spatial heterogeneity is a source of uncertainty in satellite derived SSTs. Here we show evidence that the submesoscale variability in SSTs at spatial scales of 1km is responsible for the spatial variability within satellite footprints. Previous studies of the spatial variability in SST, using ship-based radiometric data suggested that variability at scales smaller than 1 km is significant and affects the uncertainty of satellite-derived skin SSTs. We examine data collected by a calibrated thermal infrared radiometer, the Ball Experimental Sea Surface Temperature (BESST), flown on a UAV over the Arctic Ocean and compare them with coincident measurements from the MODIS spaceborne radiometer to assess the spatial variability of SST within 1 km pixels. By taking the standard deviation of all the BESST measurements within individual MODIS pixels we show that significant spatial variability exists within the footprints. The distribution of the surface variability measured by BESST shows a peak value of O(0.1K) with 95% of the pixels showing σ < 0.45K. More importantly, high-variability pixels are located at density fronts in the marginal ice zone, which are a primary source of submesoscale intermittency near the surface in the Arctic Ocean. Wavenumber spectra of the BESST SSTs indicate a spectral slope of -2, consistent with the presence of submesoscale processes. Furthermore, not only is the BESST wavenumber spectra able to match the MODIS SST spectra well, but also extends the spectral slope of -2 by 2 decades relative to MODIS, from wavelengths of 8km to 0.08km.

  20. Implications of sensor design for coral reef detection: Upscaling ground hyperspectral imagery in spatial and spectral scales

    NASA Astrophysics Data System (ADS)

    Caras, Tamir; Hedley, John; Karnieli, Arnon

    2017-12-01

    Remote sensing offers a potential tool for large scale environmental surveying and monitoring. However, remote observations of coral reefs are difficult especially due to the spatial and spectral complexity of the target compared to sensor specifications as well as the environmental implications of the water medium above. The development of sensors is driven by technological advances and the desired products. Currently, spaceborne systems are technologically limited to a choice between high spectral resolution and high spatial resolution, but not both. The current study explores the dilemma of whether future sensor design for marine monitoring should prioritise on improving their spatial or spectral resolution. To address this question, a spatially and spectrally resampled ground-level hyperspectral image was used to test two classification elements: (1) how the tradeoff between spatial and spectral resolutions affects classification; and (2) how a noise reduction by majority filter might improve classification accuracy. The studied reef, in the Gulf of Aqaba (Eilat), Israel, is heterogeneous and complex so the local substrate patches are generally finer than currently available imagery. Therefore, the tested spatial resolution was broadly divided into four scale categories from five millimeters to one meter. Spectral resolution resampling aimed to mimic currently available and forthcoming spaceborne sensors such as (1) Environmental Mapping and Analysis Program (EnMAP) that is characterized by 25 bands of 6.5 nm width; (2) VENμS with 12 narrow bands; and (3) the WorldView series with broadband multispectral resolution. Results suggest that spatial resolution should generally be prioritized for coral reef classification because the finer spatial scale tested (pixel size < 0.1 m) may compensate for some low spectral resolution drawbacks. In this regard, it is shown that the post-classification majority filtering substantially improves the accuracy of all pixel sizes up to the point where the kernel size reaches the average unit size (pixel < 0.25 m). However, careful investigation as to the effect of band distribution and choice could improve the sensor suitability for the marine environment task. This in mind, while the focus in this study was on the technologically limited spaceborne design, aerial sensors may presently provide an opportunity to implement the suggested setup.

  1. Spatial scale and distribution of neurovascular signals underlying decoding of orientation and eye of origin from fMRI data

    PubMed Central

    Harrison, Charlotte; Jackson, Jade; Oh, Seung-Mock; Zeringyte, Vaida

    2016-01-01

    Multivariate pattern analysis of functional magnetic resonance imaging (fMRI) data is widely used, yet the spatial scales and origin of neurovascular signals underlying such analyses remain unclear. We compared decoding performance for stimulus orientation and eye of origin from fMRI measurements in human visual cortex with predictions based on the columnar organization of each feature and estimated the spatial scales of patterns driving decoding. Both orientation and eye of origin could be decoded significantly above chance in early visual areas (V1–V3). Contrary to predictions based on a columnar origin of response biases, decoding performance for eye of origin in V2 and V3 was not significantly lower than that in V1, nor did decoding performance for orientation and eye of origin differ significantly. Instead, response biases for both features showed large-scale organization, evident as a radial bias for orientation, and a nasotemporal bias for eye preference. To determine whether these patterns could drive classification, we quantified the effect on classification performance of binning voxels according to visual field position. Consistent with large-scale biases driving classification, binning by polar angle yielded significantly better decoding performance for orientation than random binning in V1–V3. Similarly, binning by hemifield significantly improved decoding performance for eye of origin. Patterns of orientation and eye preference bias in V2 and V3 showed a substantial degree of spatial correlation with the corresponding patterns in V1, suggesting that response biases in these areas originate in V1. Together, these findings indicate that multivariate classification results need not reflect the underlying columnar organization of neuronal response selectivities in early visual areas. NEW & NOTEWORTHY Large-scale response biases can account for decoding of orientation and eye of origin in human early visual areas V1–V3. For eye of origin this pattern is a nasotemporal bias; for orientation it is a radial bias. Differences in decoding performance across areas and stimulus features are not well predicted by differences in columnar-scale organization of each feature. Large-scale biases in extrastriate areas are spatially correlated with those in V1, suggesting biases originate in primary visual cortex. PMID:27903637

  2. A multi-scale comparison of trait linkages to environmental and spatial variables in fish communities across a large freshwater lake.

    PubMed

    Strecker, Angela L; Casselman, John M; Fortin, Marie-Josée; Jackson, Donald A; Ridgway, Mark S; Abrams, Peter A; Shuter, Brian J

    2011-07-01

    Species present in communities are affected by the prevailing environmental conditions, and the traits that these species display may be sensitive indicators of community responses to environmental change. However, interpretation of community responses may be confounded by environmental variation at different spatial scales. Using a hierarchical approach, we assessed the spatial and temporal variation of traits in coastal fish communities in Lake Huron over a 5-year time period (2001-2005) in response to biotic and abiotic environmental factors. The association of environmental and spatial variables with trophic, life-history, and thermal traits at two spatial scales (regional basin-scale, local site-scale) was quantified using multivariate statistics and variation partitioning. We defined these two scales (regional, local) on which to measure variation and then applied this measurement framework identically in all 5 study years. With this framework, we found that there was no change in the spatial scales of fish community traits over the course of the study, although there were small inter-annual shifts in the importance of regional basin- and local site-scale variables in determining community trait composition (e.g., life-history, trophic, and thermal). The overriding effects of regional-scale variables may be related to inter-annual variation in average summer temperature. Additionally, drivers of fish community traits were highly variable among study years, with some years dominated by environmental variation and others dominated by spatially structured variation. The influence of spatial factors on trait composition was dynamic, which suggests that spatial patterns in fish communities over large landscapes are transient. Air temperature and vegetation were significant variables in most years, underscoring the importance of future climate change and shoreline development as drivers of fish community structure. Overall, a trait-based hierarchical framework may be a useful conservation tool, as it highlights the multi-scaled interactive effect of variables over a large landscape.

  3. Effects of spatial variability and scale on areal -average evapotranspiration

    NASA Technical Reports Server (NTRS)

    Famiglietti, J. S.; Wood, Eric F.

    1993-01-01

    This paper explores the effect of spatial variability and scale on areally-averaged evapotranspiration. A spatially-distributed water and energy balance model is employed to determine the effect of explicit patterns of model parameters and atmospheric forcing on modeled areally-averaged evapotranspiration over a range of increasing spatial scales. The analysis is performed from the local scale to the catchment scale. The study area is King's Creek catchment, an 11.7 sq km watershed located on the native tallgrass prairie of Kansas. The dominant controls on the scaling behavior of catchment-average evapotranspiration are investigated by simulation, as is the existence of a threshold scale for evapotranspiration modeling, with implications for explicit versus statistical representation of important process controls. It appears that some of our findings are fairly general, and will therefore provide a framework for understanding the scaling behavior of areally-averaged evapotranspiration at the catchment and larger scales.

  4. Testing a high resolution CO2 and CO emission inventory against atmospheric observations in Salt Lake City, Utah for policy applications

    NASA Astrophysics Data System (ADS)

    Mendoza, D. L.; Lin, J. C.; Mitchell, L.; Gurney, K. R.; Patarasuk, R.; Mallia, D. V.; Fasoli, B.; Bares, R.; Catharine, D.; O'Keeffe, D.; Song, Y.; Huang, J.; Horel, J.; Crosman, E.; Hoch, S.; Ehleringer, J. R.

    2016-12-01

    We address the need for robust highly-resolved emissions and trace gas concentration data required for planning purposes and policy development aimed at managing pollutant sources. Adverse health effects resulting from urban pollution exposure are the result of proximity to emission sources and atmospheric mixing, necessitating models with high spatial and temporal resolution. As urban emission sources co-emit carbon dioxide (CO2) and criteria air pollutants (CAPs), efforts to reduce specific pollutants would synergistically reduce others. We present a contemporary (2010-2015) emissions inventory and modeled CO2 and carbon monoxide (CO) concentrations for Salt Lake County, Utah. We compare emissions transported by a dispersion model against stationary measurement data and present a systematic quantification of uncertainties. The emissions inventory for CO2 is based on the Hestia emissions data inventory that resolves emissions at hourly, building and road-link resolutions, as well as on an hourly gridded scale. The emissions were scaled using annual Energy Information Administration (EIA) fuel consumption data. We derived a CO emissions inventory using methods similar to Hestia, downscaling total county emissions from the 2011 Environmental Protection Agency's (EPA) National Emissions Inventory (NEI). The gridded CO emissions were compared against the Hestia CO2 gridded data to characterize spatial similarities and differences between them. Correlations were calculated at multiple scales of aggregation. The Stochastic Time-Inverted Lagrangian Trasport (STILT) dispersion model was used to transport emissions and estimate pollutant concentrations at an hourly resolution. Modeled results were compared against stationary measurements in the Salt Lake County area. This comparison highlights spatial locations and hours of high variability and uncertainty. Sensitivity to biological fluxes as well as to specific economic sectors was tested by varying their contributions to modeled concentrations and calibrating their emissions.

  5. Estimating the spatial scales of landscape effects on abundance

    Treesearch

    Richard Chandler; Jeffrey Hepinstall-Cymerman

    2016-01-01

    Spatial variation in abundance is influenced by local- and landscape-level environmental variables, but modeling landscape effects is challenging because the spatial scales of the relationships are unknown. Current approaches involve buffering survey locations with polygons of various sizes and using model selection to identify the best scale. The buffering...

  6. Greenland Ice Sheet seasonal and spatial mass variability from model simulations and GRACE (2003-2012)

    NASA Astrophysics Data System (ADS)

    Alexander, Patrick M.; Tedesco, Marco; Schlegel, Nicole-Jeanne; Luthcke, Scott B.; Fettweis, Xavier; Larour, Eric

    2016-06-01

    Improving the ability of regional climate models (RCMs) and ice sheet models (ISMs) to simulate spatiotemporal variations in the mass of the Greenland Ice Sheet (GrIS) is crucial for prediction of future sea level rise. While several studies have examined recent trends in GrIS mass loss, studies focusing on mass variations at sub-annual and sub-basin-wide scales are still lacking. At these scales, processes responsible for mass change are less well understood and modeled, and could potentially play an important role in future GrIS mass change. Here, we examine spatiotemporal variations in mass over the GrIS derived from the Gravity Recovery and Climate Experiment (GRACE) satellites for the January 2003-December 2012 period using a "mascon" approach, with a nominal spatial resolution of 100 km, and a temporal resolution of 10 days. We compare GRACE-estimated mass variations against those simulated by the Modèle Atmosphérique Régionale (MAR) RCM and the Ice Sheet System Model (ISSM). In order to properly compare spatial and temporal variations in GrIS mass from GRACE with model outputs, we find it necessary to spatially and temporally filter model results to reproduce leakage of mass inherent in the GRACE solution. Both modeled and satellite-derived results point to a decline (of -178.9 ± 4.4 and -239.4 ± 7.7 Gt yr-1 respectively) in GrIS mass over the period examined, but the models appear to underestimate the rate of mass loss, especially in areas below 2000 m in elevation, where the majority of recent GrIS mass loss is occurring. On an ice-sheet-wide scale, the timing of the modeled seasonal cycle of cumulative mass (driven by summer mass loss) agrees with the GRACE-derived seasonal cycle, within limits of uncertainty from the GRACE solution. However, on sub-ice-sheet-wide scales, some areas exhibit significant differences in the timing of peaks in the annual cycle of mass change. At these scales, model biases, or processes not accounted for by models related to ice dynamics or hydrology, may lead to the observed differences. This highlights the need for further evaluation of modeled processes at regional and seasonal scales, and further study of ice sheet processes not accounted for, such as the role of subglacial hydrology in variations in glacial flow.

  7. Architectural Implications for Spatial Object Association Algorithms*

    PubMed Central

    Kumar, Vijay S.; Kurc, Tahsin; Saltz, Joel; Abdulla, Ghaleb; Kohn, Scott R.; Matarazzo, Celeste

    2013-01-01

    Spatial object association, also referred to as crossmatch of spatial datasets, is the problem of identifying and comparing objects in two or more datasets based on their positions in a common spatial coordinate system. In this work, we evaluate two crossmatch algorithms that are used for astronomical sky surveys, on the following database system architecture configurations: (1) Netezza Performance Server®, a parallel database system with active disk style processing capabilities, (2) MySQL Cluster, a high-throughput network database system, and (3) a hybrid configuration consisting of a collection of independent database system instances with data replication support. Our evaluation provides insights about how architectural characteristics of these systems affect the performance of the spatial crossmatch algorithms. We conducted our study using real use-case scenarios borrowed from a large-scale astronomy application known as the Large Synoptic Survey Telescope (LSST). PMID:25692244

  8. The underlying processes of a soil mite metacommunity on a small scale.

    PubMed

    Dong, Chengxu; Gao, Meixiang; Guo, Chuanwei; Lin, Lin; Wu, Donghui; Zhang, Limin

    2017-01-01

    Metacommunity theory provides an understanding of how ecological processes regulate local community assemblies. However, few field studies have evaluated the underlying mechanisms of a metacommunity on a small scale through revealing the relative roles of spatial and environmental filtering in structuring local community composition. Based on a spatially explicit sampling design in 2012 and 2013, this study aims to evaluate the underlying processes of a soil mite metacommunity on a small spatial scale (50 m) in a temperate deciduous forest located at the Maoershan Ecosystem Research Station, Northeast China. Moran's eigenvector maps (MEMs) were used to model independent spatial variables. The relative importance of spatial (including trend variables, i.e., geographical coordinates, and broad- and fine-scale spatial variables) and environmental factors in driving the soil mite metacommunity was determined by variation partitioning. Mantel and partial Mantel tests and a redundancy analysis (RDA) were also used to identify the relative contributions of spatial and environmental variables. The results of variation partitioning suggested that the relatively large and significant variance was a result of spatial variables (including broad- and fine-scale spatial variables and trend), indicating the importance of dispersal limitation and autocorrelation processes. The significant contribution of environmental variables was detected in 2012 based on a partial Mantel test, and soil moisture and soil organic matter were especially important for the soil mite metacommunity composition in both years. The study suggested that the soil mite metacommunity was primarily regulated by dispersal limitation due to broad-scale and neutral biotic processes at a fine-scale and that environmental filtering might be of subordinate importance. In conclusion, a combination of metacommunity perspectives between neutral and species sorting theories was suggested to be important in the observed structure of the soil mite metacommunity at the studied small scale.

  9. The underlying processes of a soil mite metacommunity on a small scale

    PubMed Central

    Guo, Chuanwei; Lin, Lin; Wu, Donghui; Zhang, Limin

    2017-01-01

    Metacommunity theory provides an understanding of how ecological processes regulate local community assemblies. However, few field studies have evaluated the underlying mechanisms of a metacommunity on a small scale through revealing the relative roles of spatial and environmental filtering in structuring local community composition. Based on a spatially explicit sampling design in 2012 and 2013, this study aims to evaluate the underlying processes of a soil mite metacommunity on a small spatial scale (50 m) in a temperate deciduous forest located at the Maoershan Ecosystem Research Station, Northeast China. Moran’s eigenvector maps (MEMs) were used to model independent spatial variables. The relative importance of spatial (including trend variables, i.e., geographical coordinates, and broad- and fine-scale spatial variables) and environmental factors in driving the soil mite metacommunity was determined by variation partitioning. Mantel and partial Mantel tests and a redundancy analysis (RDA) were also used to identify the relative contributions of spatial and environmental variables. The results of variation partitioning suggested that the relatively large and significant variance was a result of spatial variables (including broad- and fine-scale spatial variables and trend), indicating the importance of dispersal limitation and autocorrelation processes. The significant contribution of environmental variables was detected in 2012 based on a partial Mantel test, and soil moisture and soil organic matter were especially important for the soil mite metacommunity composition in both years. The study suggested that the soil mite metacommunity was primarily regulated by dispersal limitation due to broad-scale and neutral biotic processes at a fine-scale and that environmental filtering might be of subordinate importance. In conclusion, a combination of metacommunity perspectives between neutral and species sorting theories was suggested to be important in the observed structure of the soil mite metacommunity at the studied small scale. PMID:28481906

  10. Socio-Spatial Patterning of Off-Sale and On-Sale Alcohol Outlets in a Texas City

    PubMed Central

    Han, Daikwon; Gorman, Dennis M.

    2014-01-01

    Introduction and Aims To examine the socio-spatial patterning of off-sale and on-sale alcohol outlets following a policy change that ended prohibition of off-sale outlets in Lubbock, Texas. Design and Methods The spatial patterning of alcohol outlets by licensing type was examined using the k-function difference (D statistic) to compare the relative degree of spatial aggregation of the two types of alcohol outlets and by the spatial scan statistic to identify statistically significant geographic clusters of outlets. The sociodemographic characteristics of the areas containing clusters of outlets were compared to the rest of the city. In addition, the socioeconomic characteristics of census block groups with and without existing on-sale outlets were compared, as were the socioeconomic characteristics of census block groups with and without the newly issued off-sale licenses. Results The existing on-sale premises in Lubbock and the newly established off-sale premises introduced as a result of the 2009 policy change displayed different spatial patterns, with the latter being more spatially dispersed. A large cluster of on-sale outlets identified in the north-east of the city was located in a socially and economically disadvantaged area of the city. Discussion and Conclusion The findings support the view that it is important to understand the local context of deprivation within a city when examining the location of alcohol outlets and add to the existing research by drawing attention to the importance of geographic scale in assessing such relationships. PMID:24320205

  11. Socio-spatial patterning of off-sale and on-sale alcohol outlets in a Texas city.

    PubMed

    Han, Daikwon; Gorman, Dennis M

    2014-03-01

    To examine the socio-spatial patterning of off-sale and on-sale alcohol outlets following a policy change that ended prohibition of off-sale outlets in Lubbock, Texas. The spatial patterning of alcohol outlets by licensing type was examined using the k-function difference (D statistic) to compare the relative degree of spatial aggregation of the two types of alcohol outlets and by the spatial scan statistic to identify statistically significant geographic clusters of outlets. The sociodemographic characteristics of the areas containing clusters of outlets were compared with the rest of the city. In addition, the socioeconomic characteristics of census block groups with and without existing on-sale outlets were compared, as were the socioeconomic characteristics of census block groups with and without the newly issued off-sale licenses. The existing on-sale premises in Lubbock and the newly established off-sale premises introduced as a result of the 2009 policy change displayed different spatial patterns, with the latter being more spatially dispersed. A large cluster of on-sale outlets identified in the north-east of the city was located in a socially and economically disadvantaged area of the city. The findings support the view that it is important to understand the local context of deprivation within a city when examining the location of alcohol outlets and add to the existing research by drawing attention to the importance of geographic scale in assessing such relationships. © 2013 Australasian Professional Society on Alcohol and other Drugs.

  12. Scale-dependent associations of Band-tailed Pigeon counts at mineral sites

    USGS Publications Warehouse

    Overton, Cory T.; Casazza, Michael L.; Coates, Peter S.

    2010-01-01

    The abundance of Band-tailed Pigeons (Patagioenas fasciata monilis) has declined substantially from historic numbers along the Pacific Coast. Identification of patterns and causative factors of this decline are hampered because habitat use data are limited, and temporal and spatial variability patterns associated with population indices are not known. Furthermore, counts are influenced not only by pigeon abundance but also by rate of visitation to mineral sites, which may not be consistent. To address these issues, we conducted mineral site counts during 2001 and 2002 at 20 locations from 4 regions in the Pacific Northwest, including central Oregon and western Washington, USA, and British Columbia, Canada. We developed inference models that consisted of environmental factors and spatial characteristics at multiple spatial scales. Based on information theory, we compared models within a final set that included variables measured at 3 spatial scales (0.03 ha, 3.14 ha, and 7850 ha). Pigeon counts increased from central Oregon through northern Oregon and decreased into British Columbia. After accounting for this spatial pattern, we found that pigeon counts increased 12% ± 2.7 with a 10% increase in the amount of deciduous forested area within 100 m from a mineral site. Also, distance from the mineral site of interest to the nearest known mineral site was positively related to pigeon counts. These findings provide direction for future research focusing on understanding the relationships between indices of relative abundance and complete counts (censuses) of pigeon populations by identifying habitat characteristics that might influence visitation rates. Furthermore, our results suggest that spatial arrangement of mineral sites influences Band-tailed Pigeon counts and the populations which those counts represent.

  13. From broadscale patterns to fine-scale processes: habitat structure influences genetic differentiation in the pitcher plant midge across multiple spatial scales.

    PubMed

    Rasic, Gordana; Keyghobadi, Nusha

    2012-01-01

    The spatial scale at which samples are collected and analysed influences the inferences that can be drawn from landscape genetic studies. We examined genetic structure and its landscape correlates in the pitcher plant midge, Metriocnemus knabi, an inhabitant of the purple pitcher plant, Sarracenia purpurea, across several spatial scales that are naturally delimited by the midge's habitat (leaf, plant, cluster of plants, bog and system of bogs). We analysed 11 microsatellite loci in 710 M. knabi larvae from two systems of bogs in Algonquin Provincial Park (Canada) and tested the hypotheses that variables related to habitat structure are associated with genetic differentiation in this midge. Up to 54% of variation in individual-based genetic distances at several scales was explained by broadscale landscape variables of bog size, pitcher plant density within bogs and connectivity of pitcher plant clusters. Our results indicate that oviposition behaviour of females at fine scales, as inferred from the spatial locations of full-sib larvae, and spatially limited gene flow at broad scales represent the important processes underlying observed genetic patterns in M. knabi. Broadscale landscape features (bog size and plant density) appear to influence oviposition behaviour of midges, which in turn influences the patterns of genetic differentiation observed at both fine and broad scales. Thus, we inferred linkages among genetic patterns, landscape patterns and ecological processes across spatial scales in M. knabi. Our results reinforce the value of exploring such links simultaneously across multiple spatial scales and landscapes when investigating genetic diversity within a species. © 2011 Blackwell Publishing Ltd.

  14. Soil Texture Often Exerts a Stronger Influence Than Precipitation on Mesoscale Soil Moisture Patterns

    NASA Astrophysics Data System (ADS)

    Dong, Jingnuo; Ochsner, Tyson E.

    2018-03-01

    Soil moisture patterns are commonly thought to be dominated by land surface characteristics, such as soil texture, at small scales and by atmospheric processes, such as precipitation, at larger scales. However, a growing body of evidence challenges this conceptual model. We investigated the structural similarity and spatial correlations between mesoscale (˜1-100 km) soil moisture patterns and land surface and atmospheric factors along a 150 km transect using 4 km multisensor precipitation data and a cosmic-ray neutron rover, with a 400 m diameter footprint. The rover was used to measure soil moisture along the transect 18 times over 13 months. Spatial structures of soil moisture, soil texture (sand content), and antecedent precipitation index (API) were characterized using autocorrelation functions and fitted with exponential models. Relative importance of land surface characteristics and atmospheric processes were compared using correlation coefficients (r) between soil moisture and sand content or API. The correlation lengths of soil moisture, sand content, and API ranged from 12-32 km, 13-20 km, and 14-45 km, respectively. Soil moisture was more strongly correlated with sand content (r = -0.536 to -0.704) than with API for all but one date. Thus, land surface characteristics exhibit coherent spatial patterns at scales up to 20 km, and those patterns often exert a stronger influence than do precipitation patterns on mesoscale spatial patterns of soil moisture.

  15. Spatial and Functional Organization of Pig Trade in Different European Production Systems: Implications for Disease Prevention and Control.

    PubMed

    Relun, Anne; Grosbois, Vladimir; Sánchez-Vizcaíno, José Manuel; Alexandrov, Tsviatko; Feliziani, Francesco; Waret-Szkuta, Agnès; Molia, Sophie; Etter, Eric Marcel Charles; Martínez-López, Beatriz

    2016-01-01

    Understanding the complexity of live pig trade organization is a key factor to predict and control major infectious diseases, such as classical swine fever (CSF) or African swine fever (ASF). Whereas the organization of pig trade has been described in several European countries with indoor commercial production systems, little information is available on this organization in other systems, such as outdoor or small-scale systems. The objective of this study was to describe and compare the spatial and functional organization of live pig trade in different European countries and different production systems. Data on premise characteristics and pig movements between premises were collected during 2011 from Bulgaria, France, Italy, and Spain, which swine industry is representative of most of the production systems in Europe (i.e., commercial vs. small-scale and outdoor vs. indoor). Trade communities were identified in each country using the Walktrap algorithm. Several descriptive and network metrics were generated at country and community levels. Pig trade organization showed heterogeneous spatial and functional organization. Trade communities mostly composed of indoor commercial premises were identified in western France, northern Italy, northern Spain, and north-western Bulgaria. They covered large distances, overlapped in space, demonstrated both scale-free and small-world properties, with a role of trade operators and multipliers as key premises. Trade communities involving outdoor commercial premises were identified in western Spain, south-western and central France. They were more spatially clustered, demonstrated scale-free properties, with multipliers as key premises. Small-scale communities involved the majority of premises in Bulgaria and in central and Southern Italy. They were spatially clustered and had scale-free properties, with key premises usually being commercial production premises. These results indicate that a disease might spread very differently according to the production system and that key premises could be targeted to more cost-effectively control diseases. This study provides useful epidemiological information and parameters that could be used to design risk-based surveillance strategies or to more accurately model the risk of introduction or spread of devastating swine diseases, such as ASF, CSF, or foot-and-mouth disease.

  16. Spatial and Functional Organization of Pig Trade in Different European Production Systems: Implications for Disease Prevention and Control

    PubMed Central

    Relun, Anne; Grosbois, Vladimir; Sánchez-Vizcaíno, José Manuel; Alexandrov, Tsviatko; Feliziani, Francesco; Waret-Szkuta, Agnès; Molia, Sophie; Etter, Eric Marcel Charles; Martínez-López, Beatriz

    2016-01-01

    Understanding the complexity of live pig trade organization is a key factor to predict and control major infectious diseases, such as classical swine fever (CSF) or African swine fever (ASF). Whereas the organization of pig trade has been described in several European countries with indoor commercial production systems, little information is available on this organization in other systems, such as outdoor or small-scale systems. The objective of this study was to describe and compare the spatial and functional organization of live pig trade in different European countries and different production systems. Data on premise characteristics and pig movements between premises were collected during 2011 from Bulgaria, France, Italy, and Spain, which swine industry is representative of most of the production systems in Europe (i.e., commercial vs. small-scale and outdoor vs. indoor). Trade communities were identified in each country using the Walktrap algorithm. Several descriptive and network metrics were generated at country and community levels. Pig trade organization showed heterogeneous spatial and functional organization. Trade communities mostly composed of indoor commercial premises were identified in western France, northern Italy, northern Spain, and north-western Bulgaria. They covered large distances, overlapped in space, demonstrated both scale-free and small-world properties, with a role of trade operators and multipliers as key premises. Trade communities involving outdoor commercial premises were identified in western Spain, south-western and central France. They were more spatially clustered, demonstrated scale-free properties, with multipliers as key premises. Small-scale communities involved the majority of premises in Bulgaria and in central and Southern Italy. They were spatially clustered and had scale-free properties, with key premises usually being commercial production premises. These results indicate that a disease might spread very differently according to the production system and that key premises could be targeted to more cost-effectively control diseases. This study provides useful epidemiological information and parameters that could be used to design risk-based surveillance strategies or to more accurately model the risk of introduction or spread of devastating swine diseases, such as ASF, CSF, or foot-and-mouth disease. PMID:26870738

  17. Landscape scale measures of steelhead (Oncorhynchus mykiss) bioenergetic growth rate potential in Lake Michigan and comparison with angler catch rates

    USGS Publications Warehouse

    Hook, T.O.; Rutherford, E.S.; Brines, Shannon J.; Geddes, C.A.; Mason, D.M.; Schwab, D.J.; Fleischer, G.W.

    2004-01-01

    The relative quality of a habitat can influence fish consumption, growth, mortality, and production. In order to quantify habitat quality, several authors have combined bioenergetic and foraging models to generate spatially explicit estimates of fish growth rate potential (GRP). However, the capacity of GRP to reflect the spatial distributions of fishes over large areas has not been fully evaluated. We generated landscape scale estimates of steelhead (Oncorhynchus mykiss) GRP throughout Lake Michigan for 1994-1996, and used these estimates to test the hypotheses that GRP is a good predictor of spatial patterns of steelhead catch rates. We used surface temperatures (measured with AVHRR satellite imagery) and acoustically measured steelhead prey densities (alewife, Alosa pseudoharengus) as inputs for the GRP model. Our analyses demonstrate that potential steelhead growth rates in Lake Michigan are highly variable in both space and time. Steelhead GRP tended to increase with latitude, and mean GRP was much higher during September 1995, compared to 1994 and 1996. In addition, our study suggests that landscape scale measures of GRP are not good predictors of steelhead catch rates throughout Lake Michigan, but may provide an index of interannual variation in system-wide habitat quality.

  18. Simulations of Dynamo and Magnetorotational Instability in Madison Plasma Experiments and Astrophysical Disks

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ebrahimi, Fatima

    Magnetic fields are observed to exist on all scales in many astrophysical sources such as stars, galaxies, and accretion discs. Understanding the origin of large scale magnetic fields, whereby the field emerges on spatial scales large compared to the fluctuations, has been a particularly long standing challenge. Our physics objective are: 1) what are the minimum ingredients for large-scale dynamo growth? 2) could a large-scale magnetic field grow out of turbulence and sustained despite the presence of dissipation? These questions are fundamental for understanding the large-scale dynamo in both laboratory and astrophysical plasmas. Here, we report major new findings inmore » the area of Large-Scale Dynamo (magnetic field generation).« less

  19. Spatial versus Tree Representations of Proximity Data.

    ERIC Educational Resources Information Center

    Pruzansky, Sandra; And Others

    1982-01-01

    Two-dimensional euclidean planes and additive trees are two of the most common representations of proximity data for multidimensional scaling. Guidelines for comparing these representations and discovering properties that could help identify which representation is more appropriate for a given data set are presented. (Author/JKS)

  20. Probabilistic Downscaling of Remote Sensing Data with Applications for Multi-Scale Biogeochemical Flux Modeling.

    PubMed

    Stoy, Paul C; Quaife, Tristan

    2015-01-01

    Upscaling ecological information to larger scales in space and downscaling remote sensing observations or model simulations to finer scales remain grand challenges in Earth system science. Downscaling often involves inferring subgrid information from coarse-scale data, and such ill-posed problems are classically addressed using regularization. Here, we apply two-dimensional Tikhonov Regularization (2DTR) to simulate subgrid surface patterns for ecological applications. Specifically, we test the ability of 2DTR to simulate the spatial statistics of high-resolution (4 m) remote sensing observations of the normalized difference vegetation index (NDVI) in a tundra landscape. We find that the 2DTR approach as applied here can capture the major mode of spatial variability of the high-resolution information, but not multiple modes of spatial variability, and that the Lagrange multiplier (γ) used to impose the condition of smoothness across space is related to the range of the experimental semivariogram. We used observed and 2DTR-simulated maps of NDVI to estimate landscape-level leaf area index (LAI) and gross primary productivity (GPP). NDVI maps simulated using a γ value that approximates the range of observed NDVI result in a landscape-level GPP estimate that differs by ca 2% from those created using observed NDVI. Following findings that GPP per unit LAI is lower near vegetation patch edges, we simulated vegetation patch edges using multiple approaches and found that simulated GPP declined by up to 12% as a result. 2DTR can generate random landscapes rapidly and can be applied to disaggregate ecological information and compare of spatial observations against simulated landscapes.

  1. Probabilistic Downscaling of Remote Sensing Data with Applications for Multi-Scale Biogeochemical Flux Modeling

    PubMed Central

    Stoy, Paul C.; Quaife, Tristan

    2015-01-01

    Upscaling ecological information to larger scales in space and downscaling remote sensing observations or model simulations to finer scales remain grand challenges in Earth system science. Downscaling often involves inferring subgrid information from coarse-scale data, and such ill-posed problems are classically addressed using regularization. Here, we apply two-dimensional Tikhonov Regularization (2DTR) to simulate subgrid surface patterns for ecological applications. Specifically, we test the ability of 2DTR to simulate the spatial statistics of high-resolution (4 m) remote sensing observations of the normalized difference vegetation index (NDVI) in a tundra landscape. We find that the 2DTR approach as applied here can capture the major mode of spatial variability of the high-resolution information, but not multiple modes of spatial variability, and that the Lagrange multiplier (γ) used to impose the condition of smoothness across space is related to the range of the experimental semivariogram. We used observed and 2DTR-simulated maps of NDVI to estimate landscape-level leaf area index (LAI) and gross primary productivity (GPP). NDVI maps simulated using a γ value that approximates the range of observed NDVI result in a landscape-level GPP estimate that differs by ca 2% from those created using observed NDVI. Following findings that GPP per unit LAI is lower near vegetation patch edges, we simulated vegetation patch edges using multiple approaches and found that simulated GPP declined by up to 12% as a result. 2DTR can generate random landscapes rapidly and can be applied to disaggregate ecological information and compare of spatial observations against simulated landscapes. PMID:26067835

  2. High spatial variation in population size and symbiotic performance of Rhizobium leguminosarum bv. trifolii with white clover in New Zealand pasture soils.

    PubMed

    Wakelin, Steven; Tillard, Guyléne; van Ham, Robert; Ballard, Ross; Farquharson, Elizabeth; Gerard, Emily; Geurts, Rene; Brown, Matthew; Ridgway, Hayley; O'Callaghan, Maureen

    2018-01-01

    Biological nitrogen fixation through the legume-rhizobia symbiosis is important for sustainable pastoral production. In New Zealand, the most widespread and valuable symbiosis occurs between white clover (Trifolium repens L.) and Rhizobium leguminosarum bv. trifolii (Rlt). As variation in the population size (determined by most probable number assays; MPN) and effectiveness of N-fixation (symbiotic potential; SP) of Rlt in soils may affect white clover performance, the extent in variation in these properties was examined at three different spatial scales: (1) From 26 sites across New Zealand, (2) at farm-wide scale, and (3) within single fields. Overall, Rlt populations ranged from 95 to >1 x 108 per g soil, with variation similar at the three spatial scales assessed. For almost all samples, there was no relationship between rhizobia population size and ability of the population to fix N during legume symbiosis (SP). When compared with the commercial inoculant strain, the SP of soils ranged between 14 to 143% efficacy. The N-fixing ability of rhizobia populations varied more between samples collected from within a single hill country field (0.8 ha) than between 26 samples collected from diverse locations across New Zealand. Correlations between SP and calcium and aluminium content were found in all sites, except within a dairy farm field. Given the general lack of association between SP and MPN, and high spatial variability of SP at single field scale, provision of advice for treating legume seed with rhizobia based on field-average MPN counts needs to be carefully considered.

  3. Functional strategies drive community assembly of stream fishes along environmental gradients and across spatial scales

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Troia, Matthew J.; Gido, Keith B.

    Trade-offs among functional traits produce multi-trait strategies that shape species interactions with the environment and drive the assembly of local communities from regional species pools. Stream fish communities vary along stream size gradients and among hierarchically structured habitat patches, but little is known about how the dispersion of strategies varies along environmental gradients and across spatial scales. We used null models to quantify the dispersion of reproductive life history, feeding, and locomotion strategies in communities sampled at three spatial scales in a prairie stream network in Kansas, USA. Strategies were generally underdispersed at all spatial scales, corroborating the longstanding notionmore » of abiotic filtering in stream fish communities. We tested for variation in strategy dispersion along a gradient of stream size and between headwater streams draining different ecoregions. Reproductive life history strategies became increasingly underdispersed moving from downstream to upstream, suggesting that abiotic filtering is stronger in headwaters. This pattern was stronger among reaches compared to mesohabitats, supporting the premise that differences in hydrologic regime among reaches filter reproductive life history strategies. Feeding strategies became increasingly underdispersed moving from upstream to downstream, indicating that environmental filters associated with stream size affect the dispersion of feeding and reproductive life history in opposing ways. Weak differences in strategy dispersion were detected between ecoregions, suggesting that different abiotic filters or strategies drive community differences between ecoregions. Lastly, given the pervasiveness of multi-trait strategies in plant and animal communities, we conclude that the assessment of strategy dispersion offers a comprehensive approach for elucidating mechanisms of community assembly.« less

  4. High spatial variation in population size and symbiotic performance of Rhizobium leguminosarum bv. trifolii with white clover in New Zealand pasture soils

    PubMed Central

    Tillard, Guyléne; van Ham, Robert; Ballard, Ross; Farquharson, Elizabeth; Gerard, Emily; Geurts, Rene; Brown, Matthew; Ridgway, Hayley; O’Callaghan, Maureen

    2018-01-01

    Biological nitrogen fixation through the legume-rhizobia symbiosis is important for sustainable pastoral production. In New Zealand, the most widespread and valuable symbiosis occurs between white clover (Trifolium repens L.) and Rhizobium leguminosarum bv. trifolii (Rlt). As variation in the population size (determined by most probable number assays; MPN) and effectiveness of N-fixation (symbiotic potential; SP) of Rlt in soils may affect white clover performance, the extent in variation in these properties was examined at three different spatial scales: (1) From 26 sites across New Zealand, (2) at farm-wide scale, and (3) within single fields. Overall, Rlt populations ranged from 95 to >1 x 108 per g soil, with variation similar at the three spatial scales assessed. For almost all samples, there was no relationship between rhizobia population size and ability of the population to fix N during legume symbiosis (SP). When compared with the commercial inoculant strain, the SP of soils ranged between 14 to 143% efficacy. The N-fixing ability of rhizobia populations varied more between samples collected from within a single hill country field (0.8 ha) than between 26 samples collected from diverse locations across New Zealand. Correlations between SP and calcium and aluminium content were found in all sites, except within a dairy farm field. Given the general lack of association between SP and MPN, and high spatial variability of SP at single field scale, provision of advice for treating legume seed with rhizobia based on field-average MPN counts needs to be carefully considered. PMID:29489845

  5. Exploring reanalysis application for the purposes of climatological applications at regional scale

    NASA Astrophysics Data System (ADS)

    Kaspar, F.; Kaiser-Weiss, A.; Obregon, A.; Borsche, M.

    2014-12-01

    Recent advances in reanalysis methods yield new tools for climatological application. Here we use applications in Germany to discuss methodological issues at regional scale. Especially in the field of renewable energy planning and production there is a need for climatological information across all spatial scales, i.e., from climatology at a certain site to the spatial scale of national renewable energy production. Also, there is the need for the temporal resolution between the scales of a few minutes up to decadal changes. We explore the spatio-temporal scales where reanalyses can be used with benefit together with the traditional approaches which are based on station measurements only. Reanalyses can provide valuable additional information on larger scale variability, e.g. multi-annual variation over Germany. However, the change in the observing system, model errors and biases have to be carefully considered. On the other hand, the ground-based observation networks suffer from change of the station distribution, changes in instrumentation, measurements procedures and quality control as well as local changes which might modify their spatial representativity. All these effects might often been unknown or hard to characterize, although plenty of the meta-data information has been recorded for the German stations. European research activities on global and regional reanalysis are supported by the Framework Program 7 (FP7) of the European Commission as a preparation activity for the European COPERNICUS climate change service. Here we start from the user requirements for reanalyses as they were collected in the FP7 project CORE-CLIMAX. Second, we give an overview over the methods to determine whether a specific reanalysis is fit for a certain purpose (discussed in FP7 projects CORE-CLIMAX and UERRA) . Thirdly, we compare for an example application the feedback statistics from global (ERA-Interim) and regional (HErZ - COSMO) reanalyses and show which conclusion can be drawn. Finally, the wind climatologies derived from the different reanalyses (ERA-Interim, ERA-20C, HErZ-COSMO) are compared with point measurements and gridded field climatologies derived from ground-based stations, illustrating the added value of the reanalysis fields.

  6. Emerging factors associated with the decline of a gray fox population and multi-scale land cover associations of mesopredators in the Chicago metropolitan area.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Willingham, Alison N.; /Ohio State U.

    Statewide surveys of furbearers in Illinois indicate gray (Urocyon cinereoargenteus) and red (Vulpes vulpes) foxes have experienced substantial declines in relative abundance, whereas other species such as raccoons (Procyon lotor) and coyotes (Canis latrans) have exhibited dramatic increases during the same time period. The cause of the declines of gray and red foxes has not been identified, and the current status of gray foxes remains uncertain. Therefore, I conducted a large-scale predator survey and tracked radiocollared gray foxes from 2004 to 2007 in order to determine the distribution, survival, cause-specific mortality sources and land cover associations of gray foxes inmore » an urbanized region of northeastern Illinois, and examined the relationships between the occurrence of gray fox and the presence other species of mesopredators, specifically coyotes and raccoons. Although generalist mesopredators are common and can reach high densities in many urban areas their urban ecology is poorly understood due to their secretive nature and wariness of humans. Understanding how mesopredators utilize urbanized landscapes can be useful in the management and control of disease outbreaks, mitigation of nuisance wildlife issues, and gaining insight into how mesopredators shape wildlife communities in highly fragmented areas. I examined habitat associations of raccoons, opossums (Didelphis virginiana), domestic cats (Felis catus), coyotes, foxes (gray and red), and striped skunks (Mephitis mephitis) at multiple spatial scales in an urban environment. Gray fox occurrence was rare and widely dispersed, and survival estimates were similar to other studies. Gray fox occurrence was negatively associated with natural and semi-natural land cover types. Fox home range size increased with increasing urban development suggesting that foxes may be negatively influenced by urbanization. Gray fox occurrence was not associated with coyote or raccoon presence. However, spatial avoidance and mortality due to coyote predation was documented and disease was a major mortality source for foxes. The declining relative abundance of gray fox in Illinois is likely a result of a combination of factors. Assessment of habitat associations indicated that urban mesopredators, particularly coyotes and foxes, perceived the landscape as relatively homogeneous and that urban mesopredators interacted with the environment at scales larger than that accommodated by remnant habitat patches. Coyote and fox presence was found to be associated with a high degree of urban development at large and intermediate spatial scales. However, at a small spatial scale fox presence was associated with high density urban land cover whereas coyote presence was associated with urban development with increased forest cover. Urban habitats can offer a diversity of prey items and anthropogenic resources and natural land cover could offer coyotes daytime resting opportunities in urban areas where they may not be as tolerated as smaller foxes. Raccoons and opossums were found to utilize moderately developed landscapes with interspersed natural and semi-natural land covers at a large spatial scale, which may facilitate dispersal movements. At intermediate and small spatial scales, both species were found to utilize areas that were moderately developed and included forested land cover. These results indicated that raccoons and opossums used natural areas in proximity to anthropogenic resources. At a large spatial scale, skunk presence was associated with highly developed landscapes with interspersed natural and semi-natural land covers. This may indicate that skunks perceived the urban matrix as more homogeneous than raccoons or opossums. At an intermediate spatial scale skunks were associated with moderate levels of development and increased forest cover, which indicated that they might utilize natural land cover in proximity to human-dominated land cover. At the smallest spatial scale skunk presence was associated with forested land cover surrounded by a suburban matrix. Compared to raccoons and opossums, skunks may not be tolerated in close proximity to human development in urban areas. Domestic cat presence was positively associated with increasingly urbanized and less diverse landscapes with decreased amounts of forest and urban open space at the largest spatial scale. At an intermediate spatial scale, cat presence was associated with a moderate degree of urban development characterized by increased forest cover, and at a small spatial scale cat presence was associated with a high degree of urbanization. Free-ranging domestic cats are often associated with human-dominated landscapes and likely utilize remnant natural habitat patches for hunting purposes, which may have implications for native predator and prey species existing in fragmented habitat patches in proximity to human development.« less

  7. Design and implementation of a distributed large-scale spatial database system based on J2EE

    NASA Astrophysics Data System (ADS)

    Gong, Jianya; Chen, Nengcheng; Zhu, Xinyan; Zhang, Xia

    2003-03-01

    With the increasing maturity of distributed object technology, CORBA, .NET and EJB are universally used in traditional IT field. However, theories and practices of distributed spatial database need farther improvement in virtue of contradictions between large scale spatial data and limited network bandwidth or between transitory session and long transaction processing. Differences and trends among of CORBA, .NET and EJB are discussed in details, afterwards the concept, architecture and characteristic of distributed large-scale seamless spatial database system based on J2EE is provided, which contains GIS client application, web server, GIS application server and spatial data server. Moreover the design and implementation of components of GIS client application based on JavaBeans, the GIS engine based on servlet, the GIS Application server based on GIS enterprise JavaBeans(contains session bean and entity bean) are explained.Besides, the experiments of relation of spatial data and response time under different conditions are conducted, which proves that distributed spatial database system based on J2EE can be used to manage, distribute and share large scale spatial data on Internet. Lastly, a distributed large-scale seamless image database based on Internet is presented.

  8. Modeling nutrient in-stream processes at the watershed scale using Nutrient Spiralling metrics

    NASA Astrophysics Data System (ADS)

    Marcé, R.; Armengol, J.

    2009-01-01

    One of the fundamental problems of using large-scale biogeochemical models is the uncertainty involved in aggregating the components of fine-scale deterministic models in watershed applications, and in extrapolating the results of field-scale measurements to larger spatial scales. Although spatial or temporal lumping may reduce the problem, information obtained during fine-scale research may not apply to lumped categories. Thus, the use of knowledge gained through fine-scale studies to predict coarse-scale phenomena is not straightforward. In this study, we used the nutrient uptake metrics defined in the Nutrient Spiralling concept to formulate the equations governing total phosphorus in-stream fate in a watershed-scale biogeochemical model. The rationale of this approach relies on the fact that the working unit for the nutrient in-stream processes of most watershed-scale models is the reach, the same unit used in field research based on the Nutrient Spiralling concept. Automatic calibration of the model using data from the study watershed confirmed that the Nutrient Spiralling formulation is a convenient simplification of the biogeochemical transformations involved in total phosphorus in-stream fate. Following calibration, the model was used as a heuristic tool in two ways. First, we compared the Nutrient Spiralling metrics obtained during calibration with results obtained during field-based research in the study watershed. The simulated and measured metrics were similar, suggesting that information collected at the reach scale during research based on the Nutrient Spiralling concept can be directly incorporated into models, without the problems associated with upscaling results from fine-scale studies. Second, we used results from our model to examine some patterns observed in several reports on Nutrient Spiralling metrics measured in impaired streams. Although these two exercises involve circular reasoning and, consequently, cannot validate any hypothesis, this is a powerful example of how models can work as heuristic tools to compare hypotheses and stimulate research in ecology.

  9. Spatial data analysis for exploration of regional scale geothermal resources

    NASA Astrophysics Data System (ADS)

    Moghaddam, Majid Kiavarz; Noorollahi, Younes; Samadzadegan, Farhad; Sharifi, Mohammad Ali; Itoi, Ryuichi

    2013-10-01

    Defining a comprehensive conceptual model of the resources sought is one of the most important steps in geothermal potential mapping. In this study, Fry analysis as a spatial distribution method and 5% well existence, distance distribution, weights of evidence (WofE), and evidential belief function (EBFs) methods as spatial association methods were applied comparatively to known geothermal occurrences, and to publicly-available regional-scale geoscience data in Akita and Iwate provinces within the Tohoku volcanic arc, in northern Japan. Fry analysis and rose diagrams revealed similar directional patterns of geothermal wells and volcanoes, NNW-, NNE-, NE-trending faults, hotsprings and fumaroles. Among the spatial association methods, WofE defined a conceptual model correspondent with the real world situations, approved with the aid of expert opinion. The results of the spatial association analyses quantitatively indicated that the known geothermal occurrences are strongly spatially-associated with geological features such as volcanoes, craters, NNW-, NNE-, NE-direction faults and geochemical features such as hotsprings, hydrothermal alteration zones and fumaroles. Geophysical data contains temperature gradients over 100 °C/km and heat flow over 100 mW/m2. In general, geochemical and geophysical data were better evidence layers than geological data for exploring geothermal resources. The spatial analyses of the case study area suggested that quantitative knowledge from hydrothermal geothermal resources was significantly useful for further exploration and for geothermal potential mapping in the case study region. The results can also be extended to the regions with nearly similar characteristics.

  10. Solution of the spatial neutral model yields new bounds on the Amazonian species richness

    NASA Astrophysics Data System (ADS)

    Shem-Tov, Yahav; Danino, Matan; Shnerb, Nadav M.

    2017-02-01

    Neutral models, in which individual agents with equal fitness undergo a birth-death-mutation process, are very popular in population genetics and community ecology. Usually these models are applied to populations and communities with spatial structure, but the analytic results presented so far are limited to well-mixed or mainland-island scenarios. Here we combine analytic results and numerics to obtain an approximate solution for the species abundance distribution and the species richness for the neutral model on continuous landscape. We show how the regional diversity increases when the recruitment length decreases and the spatial segregation of species grows. Our results are supported by extensive numerical simulations and allow one to probe the numerically inaccessible regime of large-scale systems with extremely small mutation/speciation rates. Model predictions are compared with the findings of recent large-scale surveys of tropical trees across the Amazon basin, yielding new bounds for the species richness (between 13100 and 15000) and the number of singleton species (between 455 and 690).

  11. Upscaling of dilution and mixing using a trajectory based Spatial Markov random walk model in a periodic flow domain

    NASA Astrophysics Data System (ADS)

    Sund, Nicole L.; Porta, Giovanni M.; Bolster, Diogo

    2017-05-01

    The Spatial Markov Model (SMM) is an upscaled model that has been used successfully to predict effective mean transport across a broad range of hydrologic settings. Here we propose a novel variant of the SMM, applicable to spatially periodic systems. This SMM is built using particle trajectories, rather than travel times. By applying the proposed SMM to a simple benchmark problem we demonstrate that it can predict mean effective transport, when compared to data from fully resolved direct numerical simulations. Next we propose a methodology for using this SMM framework to predict measures of mixing and dilution, that do not just depend on mean concentrations, but are strongly impacted by pore-scale concentration fluctuations. We use information from trajectories of particles to downscale and reconstruct pore-scale approximate concentration fields from which mixing and dilution measures are then calculated. The comparison between measurements from fully resolved simulations and predictions with the SMM agree very favorably.

  12. Response of coral assemblages to thermal stress: are bleaching intensity and spatial patterns consistent between events?

    PubMed

    Penin, Lucie; Vidal-Dupiol, Jeremie; Adjeroud, Mehdi

    2013-06-01

    Mass bleaching events resulting in coral mortality are among the greatest threats to coral reefs, and are projected to increase in frequency and intensity with global warming. Achieving a better understanding of the consistency of the response of coral assemblages to thermal stress, both spatially and temporally, is essential to determine which reefs are more able to tolerate climate change. We compared variations in spatial and taxonomic patterns between two bleaching events at the scale of an island (Moorea Island, French Polynesia). Despite similar thermal stress and light conditions, bleaching intensity was significantly lower in 2007 (approximately 37 % of colonies showed signs of bleaching) than in 2002, when 55 % of the colonies bleached. Variations in the spatial patterns of bleaching intensity were consistent between the two events. Among nine sampling stations at three locations and three depths, the stations at which the bleaching response was lowest in 2002 were those that showed the lowest levels of bleaching in 2007. The taxonomic patterns of susceptibility to bleaching were also consistent between the two events. These findings have important implications for conservation because they indicate that corals are capable of acclimatization and/or adaptation and that, even at small spatial scales, some areas are consistently more susceptible to bleaching than others.

  13. Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems.

    PubMed

    Lepère, Cécile; Domaizon, Isabelle; Taïb, Najwa; Mangot, Jean-François; Bronner, Gisèle; Boucher, Delphine; Debroas, Didier

    2013-07-01

    Understanding the spatial distribution of aquatic microbial diversity and the underlying mechanisms causing differences in community composition is a challenging and central goal for ecologists. Recent insights into protistan diversity and ecology are increasing the debate over their spatial distribution. In this study, we investigate the importance of spatial and environmental factors in shaping the small protists community structure in lakes. We analyzed small protists community composition (beta-diversity) and richness (alpha-diversity) at regional scale by different molecular methods targeting the gene coding for 18S rRNA gene (T-RFLP and 454 pyrosequencing). Our results show a distance-decay pattern for rare and dominant taxa and the spatial distribution of the latter followed the prediction of the island biogeography theory. Furthermore, geographic distances between lakes seem to be the main force shaping the protists community composition in the lakes studied here. Finally, the spatial distribution of protists was discussed at the global scale (11 worldwide distributed lakes) by comparing these results with those present in the public database. UniFrac analysis showed 18S rRNA gene OTUs compositions significantly different among most of lakes, and this difference does not seem to be related to the trophic status. © 2013 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

  14. Snow depth spatial structure from hillslope to basin scale

    NASA Astrophysics Data System (ADS)

    Deems, J. S.

    2017-12-01

    Knowledge of spatial patterns of snow accumulation is required for understanding the hydrology, climatology, and ecology of mountain regions. Spatial structure in snow accumulation patterns changes with the scale of observation, a feature that has been characterized using fractal dimensions calculated from lidar-derived snow depth maps: fractal scaling structure at short length scales, with a `scale break' transition to more stochastic patterns at longer separation distances. Previous work has shown that this fractal structure of snow depth distributions differs between sites with different vegetation and terrain characteristics. Forested areas showed a transition to a nearly random spatial distribution at a much shorter lag distance than do unforested sites, enabling a statistical characterization. Alpine areas, however, showed strong spatial structure for a much wider scale range, and were the source of the dominant spatial pattern observable over a wider area. These spatial structure characteristics suggest that the choice of measurement or model resolution (satellite sensor, DEM, field survey point spacing, etc.) will strongly affect the estimates of snow volume or mass, as well as the magnitude of spatial variability. These prior efforts used data sets that were high resolution ( 1 m laser point spacing) but of limited extent ( 1 km2), constraining detection of scale features such as fractal dimension or scale breaks to areas of relatively similar characteristics and to lag distances of under 500 m. New datasets available from the NASA JPL Airborne Snow Observatory (ASO) provide similar resolution but over large areas, enabling assessment of snow spatial structure across an entire watershed, or in similar vegetation or physiography but in different parts of the basin. Additionally, the multi-year ASO time series allows an investigation into the temporal stability of these scale characteristics, within a single snow season and between seasons of strongly varying accumulation totals and patterns. This presentation will explore initial results from this study, using data from the Tuolumne River Basin in California, USA. Fractal scaling characteristics derived from ASO lidar snow depth measurements are examined at the basin scale, as well as in varying topographic and forest cover environments.

  15. Spatial Analysis of Rice Blast in China at Three Different Scales.

    PubMed

    Guo, Fangfang; Chen, Xinglong; Lu, Minghong; Yang, Li; Wang, Shi Wei; Wu, Bo Ming

    2018-05-22

    In this study, spatial analyses were conducted at three different scales to better understand the epidemiology of rice blast, a major rice disease caused by Magnaporthe oryzae. At regional scale, across the major rice production regions in China, rice blast incidence was monitored on 101 dates at 193 stations from June 10 th to Sep. 10 th during 2009-2014, and surveyed in 143 fields in September, 2016; at county scale, 3 surveys were done covering 1-5 counties in 2015-2016; and at field scale, blast was evaluated in 6 fields in 2015-2016. Spatial cluster and hot spot analyses were conducted in GIS on the geographical pattern of the disease at regional scale, and geostatistical analysis performed at all the three scales. Cluster and hot spot analyses revealed that high-disease areas were clustered in mountainous areas in China. Geostatistical analyses detected spatial dependence of blast incidence with influence ranges of 399 to 1080 km at regional scale, and 5 to 10 m at field scale, but not at county scale. The spatial patterns at different scales might be determined by inherent properties of rice blast and environmental driving forces, and findings from this study provide helpful information to sampling and management of rice blast.

  16. Numerical Simulations of Homogeneous Turbulence Using Lagrangian-Averaged Navier-Stokes Equations

    NASA Technical Reports Server (NTRS)

    Mohseni, Kamran; Shkoller, Steve; Kosovic, Branko; Marsden, Jerrold E.; Carati, Daniele; Wray, Alan; Rogallo, Robert

    2000-01-01

    The Lagrangian-averaged Navier-Stokes (LANS) equations are numerically evaluated as a turbulence closure. They are derived from a novel Lagrangian averaging procedure on the space of all volume-preserving maps and can be viewed as a numerical algorithm which removes the energy content from the small scales (smaller than some a priori fixed spatial scale alpha) using a dispersive rather than dissipative mechanism, thus maintaining the crucial features of the large scale flow. We examine the modeling capabilities of the LANS equations for decaying homogeneous turbulence, ascertain their ability to track the energy spectrum of fully resolved direct numerical simulations (DNS), compare the relative energy decay rates, and compare LANS with well-accepted large eddy simulation (LES) models.

  17. Denitrification potential of riparian soils in relation to multiscale spatial environmental factors: a case study of a typical watershed, China.

    PubMed

    Wei, Jianbing; Feng, Hao; Cheng, Quanguo; Gao, Shiqian; Liu, Haiyan

    2017-02-01

    The objective of this study was to test the hypothesis that environmental regulators of riparian zone soil denitrification potential differ according to spatial scale within a watershed; consequently, a second objective was to provide spatial strategies for conserving and restoring the purification function of runoff in riparian ecosystems. The results show that soil denitrification in riparian zones was more heterogeneous at the profile scale than at the cross-section and landscape scales. At the profile scale, biogeochemical factors (including soil total organic carbon, total nitrogen, and nitrate-nitrogen) were the major direct regulators of the spatial distribution of soil denitrification enzyme activity (DEA). At the cross-section scale, factors included distance from river bank and vegetation density, while landscape-scale factors, including topographic index, elevation, and land use types, indirectly regulated the spatial distribution of DEA. At the profile scale, soil DEA was greatest in the upper soil layers. At the cross-section scale, maximum soil DEA occurred in the mid-part of the riparian zone. At the landscape scale, soil DEA showed an increasing trend towards downstream sites, except for those in urbanized areas.

  18. Time-variant Lagrangian transport formulation reduces aggregation bias of water and solute mean travel time in heterogeneous catchments

    NASA Astrophysics Data System (ADS)

    Danesh-Yazdi, Mohammad; Botter, Gianluca; Foufoula-Georgiou, Efi

    2017-05-01

    Lack of hydro-bio-chemical data at subcatchment scales necessitates adopting an aggregated system approach for estimating water and solute transport properties, such as residence and travel time distributions, at the catchment scale. In this work, we show that within-catchment spatial heterogeneity, as expressed in spatially variable discharge-storage relationships, can be appropriately encapsulated within a lumped time-varying stochastic Lagrangian formulation of transport. This time (variability) for space (heterogeneity) substitution yields mean travel times (MTTs) that are not significantly biased to the aggregation of spatial heterogeneity. Despite the significant variability of MTT at small spatial scales, there exists a characteristic scale above which the MTT is not impacted by the aggregation of spatial heterogeneity. Extensive simulations of randomly generated river networks reveal that the ratio between the characteristic scale and the mean incremental area is on average independent of river network topology and the spatial arrangement of incremental areas.

  19. [Spatial point patterns of Antarctic krill fishery in the northern Antarctic Peninsula].

    PubMed

    Yang, Xiao Ming; Li, Yi Xin; Zhu, Guo Ping

    2016-12-01

    As a key species in the Antarctic ecosystem, the spatial distribution of Antarctic krill (thereafter krill) often tends to present aggregation characteristics, which therefore reflects the spatial patterns of krill fishing operation. Based on the fishing data collected from Chinese krill fishing vessels, of which vessel A was professional krill fishing vessel and Vessel B was a fishing vessel which shifted between Chilean jack mackerel (Trachurus murphyi) fishing ground and krill fishing ground. In order to explore the characteristics of spatial distribution pattern and their ecological effects of two obvious different fishing fleets under a high and low nominal catch per unit effort (CPUE), from the viewpoint of spatial point pattern, the present study analyzed the spatial distribution characteristics of krill fishery in the northern Antarctic Peninsula from three aspects: (1) the two vessels' point pattern characteristics of higher CPUEs and lower CPUEs at different scales; (2) correlation of the bivariate point patterns between these points of higher CPUE and lower CPUE; and (3) correlation patterns of CPUE. Under the analysis derived from the Ripley's L function and mark correlation function, the results showed that the point patterns of the higher/lo-wer catch available were similar, both showing an aggregation distribution in this study windows at all scale levels. The aggregation intensity of krill fishing was nearly maximum at 15 km spatial scale, and kept stably higher values at the scale of 15-50 km. The aggregation intensity of krill fishery point patterns could be described in order as higher CPUE of vessel A > lower CPUE of vessel B >higher CPUE of vessel B > higher CPUE of vessel B. The relationship of the higher and lo-wer CPUEs of vessel A showed positive correlation at the spatial scale of 0-75 km, and presented stochastic relationship after 75 km scale, whereas vessel B showed positive correlation at all spatial scales. The point events of higher and lower CPUEs were synchronized, showing significant correlations at most of spatial scales because of the dynamics nature and complex of krill aggregation patterns. The distribution of vessel A's CPUEs was positively correlated at scales of 0-44 km, but negatively correlated at the scales of 44-80 km. The distribution of vessel B's CPUEs was negatively correlated at the scales of 50-70 km, but no significant correlations were found at other scales. The CPUE mark point patterns showed a negative correlation, which indicated that intraspecific competition for space and prey was significant. There were significant differences in spatial point pattern distribution between vessel A with higher fishing capacity and vessel B with lower fishing capacity. The results showed that the professional krill fishing vessel is suitable to conduct the analysis of spatial point pattern and scientific fishery survey.

  20. Estimating Soil Organic Carbon Stocks and Spatial Patterns with Statistical and GIS-Based Methods

    PubMed Central

    Zhi, Junjun; Jing, Changwei; Lin, Shengpan; Zhang, Cao; Liu, Qiankun; DeGloria, Stephen D.; Wu, Jiaping

    2014-01-01

    Accurately quantifying soil organic carbon (SOC) is considered fundamental to studying soil quality, modeling the global carbon cycle, and assessing global climate change. This study evaluated the uncertainties caused by up-scaling of soil properties from the county scale to the provincial scale and from lower-level classification of Soil Species to Soil Group, using four methods: the mean, median, Soil Profile Statistics (SPS), and pedological professional knowledge based (PKB) methods. For the SPS method, SOC stock is calculated at the county scale by multiplying the mean SOC density value of each soil type in a county by its corresponding area. For the mean or median method, SOC density value of each soil type is calculated using provincial arithmetic mean or median. For the PKB method, SOC density value of each soil type is calculated at the county scale considering soil parent materials and spatial locations of all soil profiles. A newly constructed 1∶50,000 soil survey geographic database of Zhejiang Province, China, was used for evaluation. Results indicated that with soil classification levels up-scaling from Soil Species to Soil Group, the variation of estimated SOC stocks among different soil classification levels was obviously lower than that among different methods. The difference in the estimated SOC stocks among the four methods was lowest at the Soil Species level. The differences in SOC stocks among the mean, median, and PKB methods for different Soil Groups resulted from the differences in the procedure of aggregating soil profile properties to represent the attributes of one soil type. Compared with the other three estimation methods (i.e., the SPS, mean and median methods), the PKB method holds significant promise for characterizing spatial differences in SOC distribution because spatial locations of all soil profiles are considered during the aggregation procedure. PMID:24840890

  1. Multiscale comparison of GPM radar and passive microwave precipitation fields over oceans and land: effective resolution and global/regional/local diagnostics for improving retrieval algorithms

    NASA Astrophysics Data System (ADS)

    Guilloteau, C.; Foufoula-Georgiou, E.; Kummerow, C.; Kirstetter, P. E.

    2017-12-01

    A multiscale approach is used to compare precipitation fields retrieved from GMI using the last version of the GPROF algorithm (GPROF-2017) to the DPR fields all over the globe. Using a wavelet-based spectral analysis, which renders the multi-scale decompositions of the original fields independent of each other spatially and across scales, we quantitatively assess the various scales of variability of the retrieved fields, and thus define the spatially-variable "effective resolution" (ER) of the retrievals. Globally, a strong agreement is found between passive microwave and radar patterns at scales coarser than 80km. Over oceans the patterns match down to the 20km scale. Over land, comparison statistics are spatially heterogeneous. In most areas a strong discrepancy is observed between passive microwave and radar patterns at scales finer than 40-80km. The comparison is also supported by ground-based observations over the continental US derived from the NOAA/NSSL MRMS suite of products. While larger discrepancies over land than over oceans are classically explained by land complex surface emissivity perturbing the passive microwave retrieval, other factors are investigated here, such as intricate differences in the storm structure over oceans and land. Differences in term of statistical properties (PDF of intensities and spatial organization) of precipitation fields over land and oceans are assessed from radar data, as well as differences in the relation between the 89GHz brightness temperature and precipitation. Moreover, the multiscale approach allows quantifying the part of discrepancies caused by miss-match of the location of intense cells and instrument-related geometric effects. The objective is to diagnose shortcomings of current retrieval algorithms such that targeted improvements can be made to achieve over land the same retrieval performance as over oceans.

  2. 3D deblending of simultaneous source data based on 3D multi-scale shaping operator

    NASA Astrophysics Data System (ADS)

    Zu, Shaohuan; Zhou, Hui; Mao, Weijian; Gong, Fei; Huang, Weilin

    2018-04-01

    We propose an iterative three-dimensional (3D) deblending scheme using 3D multi-scale shaping operator to separate 3D simultaneous source data. The proposed scheme is based on the property that signal is coherent, whereas interference is incoherent in some domains, e.g., common receiver domain and common midpoint domain. In two-dimensional (2D) blended record, the coherency difference of signal and interference is in only one spatial direction. Compared with 2D deblending, the 3D deblending can take more sparse constraints into consideration to obtain better performance, e.g., in 3D common receiver gather, the coherency difference is in two spatial directions. Furthermore, with different levels of coherency, signal and interference distribute in different scale curvelet domains. In both 2D and 3D blended records, most coherent signal locates in coarse scale curvelet domain, while most incoherent interference distributes in fine scale curvelet domain. The scale difference is larger in 3D deblending, thus, we apply the multi-scale shaping scheme to further improve the 3D deblending performance. We evaluate the performance of 3D and 2D deblending with the multi-scale and global shaping operators, respectively. One synthetic and one field data examples demonstrate the advantage of the 3D deblending with 3D multi-scale shaping operator.

  3. Canopy structural complexity influences forest canopy reflectance: linking terrestrial lidar with Landsat observations

    NASA Astrophysics Data System (ADS)

    Hardiman, B. S.; Atkins, J.; Dahlin, K.; Fahey, R. T.; Gough, C. M.

    2016-12-01

    Canopy physical structure - leaf quantity and arrangement - strongly affects light interception and distribution. As such, canopy physical structure is a key driver of forest carbon (C) dynamics. Terrestrial lidar systems (TLS) provide spatially explicit, quantitative characterizations of canopy physical structure at scales commensurate with plot-scale C cycling processes. As an example, previous TLS-based studies established that light use efficiency is positively correlated with canopy physical structure, influencing the trajectory of net primary production throughout forest development. Linking TLS measurements of canopy structure to multispectral satellite observations of forest canopies may enable scaling of ecosystem C cycling processes from leaves to continents. We will report on our study relating a suite of canopy structural metrics to well-established remotely sensed measurements (NDVI, EVI, albedo, tasseled cap indices, etc.) which are indicative of important forest characteristics (leaf area, canopy nitrogen, light interception, etc.). We used Landsat data, which provides observations at 30m resolution, a scale comparable to that of TLS. TLS data were acquired during 2009-2016 from forest sites throughout Eastern North America, comprised primarily of NEON and Ameriflux sites. Canopy physical structure data were compared with contemporaneous growing-season Landsat data. Metrics of canopy physical structure are expected to covary with forest composition and dominant PFT, likely influencing interaction strength between TLS and Landsat canopy metrics. More structurally complex canopies (those with more heterogeneous distributions of leaf area) are expected to have lower albedo, suggesting greater canopy light absorption (higher fAPAR) than simpler canopies. We expect that vegetation indices (NDVI, EVI) will increase with TLS metrics of spatial heterogeneity, and not simply quantity, of leaves, supporting our hypothesis that canopy light absorption is dependent on both leaf quantity and arrangement. Relating satellite observations of canopy properties to TLS metrics of canopy physical structure represents an important advance for modelling canopy energy balance and forest C cycling processes at large spatial scales.

  4. Uncertainty indication in soil function maps - transparent and easy-to-use information to support sustainable use of soil resources

    NASA Astrophysics Data System (ADS)

    Greiner, Lucie; Nussbaum, Madlene; Papritz, Andreas; Zimmermann, Stephan; Gubler, Andreas; Grêt-Regamey, Adrienne; Keller, Armin

    2018-05-01

    Spatial information on soil function fulfillment (SFF) is increasingly being used to inform decision-making in spatial planning programs to support sustainable use of soil resources. Soil function maps visualize soils abilities to fulfill their functions, e.g., regulating water and nutrient flows, providing habitats, and supporting biomass production based on soil properties. Such information must be reliable for informed and transparent decision-making in spatial planning programs. In this study, we add to the transparency of soil function maps by (1) indicating uncertainties arising from the prediction of soil properties generated by digital soil mapping (DSM) that are used for soil function assessment (SFA) and (2) showing the response of different SFA methods to the propagation of uncertainties through the assessment. For a study area of 170 km2 in the Swiss Plateau, we map 10 static soil sub-functions for agricultural soils for a spatial resolution of 20 × 20 m together with their uncertainties. Mapping the 10 soil sub-functions using simple ordinal assessment scales reveals pronounced spatial patterns with a high variability of SFF scores across the region, linked to the inherent properties of the soils and terrain attributes and climate conditions. Uncertainties in soil properties propagated through SFA methods generally lead to substantial uncertainty in the mapped soil sub-functions. We propose two types of uncertainty maps that can be readily understood by stakeholders. Cumulative distribution functions of SFF scores indicate that SFA methods respond differently to the propagated uncertainty of soil properties. Even where methods are comparable on the level of complexity and assessment scale, their comparability in view of uncertainty propagation might be different. We conclude that comparable uncertainty indications in soil function maps are relevant to enable informed and transparent decisions on the sustainable use of soil resources.

  5. Soil organic matter dynamics and CO2 fluxes in relation to landscape scale processes: linking process understanding to regional scale carbon mass-balances

    NASA Astrophysics Data System (ADS)

    Van Oost, Kristof; Nadeu, Elisabet; Wiaux, François; Wang, Zhengang; Stevens, François; Vanclooster, Marnik; Tran, Anh; Bogaert, Patrick; Doetterl, Sebastian; Lambot, Sébastien; Van wesemael, Bas

    2014-05-01

    In this paper, we synthesize the main outcomes of a collaborative project (2009-2014) initiated at the UCL (Belgium). The main objective of the project was to increase our understanding of soil organic matter dynamics in complex landscapes and use this to improve predictions of regional scale soil carbon balances. In a first phase, the project characterized the emergent spatial variability in soil organic matter storage and key soil properties at the regional scale. Based on the integration of remote sensing, geomorphological and soil analysis techniques, we quantified the temporal and spatial variability of soil carbon stock and pool distribution at the local and regional scales. This work showed a linkage between lateral fluxes of C in relation with sediment transport and the spatial variation in carbon storage at multiple spatial scales. In a second phase, the project focused on characterizing key controlling factors and process interactions at the catena scale. In-situ experiments of soil CO2 respiration showed that the soil carbon response at the catena scale was spatially heterogeneous and was mainly controlled by the catenary variation of soil physical attributes (soil moisture, temperature, C quality). The hillslope scale characterization relied on advanced hydrogeophysical techniques such as GPR (Ground Penetrating Radar), EMI (Electromagnetic induction), ERT (Electrical Resistivity Tomography), and geophysical inversion and data mining tools. Finally, we report on the integration of these insights into a coupled and spatially explicit model and its application. Simulations showed that C stocks and redistribution of mass and energy fluxes are closely coupled, they induce structured spatial and temporal patterns with non negligible attached uncertainties. We discuss the main outcomes of these activities in relation to sink-source behavior and relevance of erosion processes for larger-scale C budgets.

  6. Floodplain complexity and surface metrics: influences of scale and geomorphology

    USGS Publications Warehouse

    Scown, Murray W.; Thoms, Martin C.; DeJager, Nathan R.

    2015-01-01

    Many studies of fluvial geomorphology and landscape ecology examine a single river or landscape, thus lack generality, making it difficult to develop a general understanding of the linkages between landscape patterns and larger-scale driving variables. We examined the spatial complexity of eight floodplain surfaces in widely different geographic settings and determined how patterns measured at different scales relate to different environmental drivers. Floodplain surface complexity is defined as having highly variable surface conditions that are also highly organised in space. These two components of floodplain surface complexity were measured across multiple sampling scales from LiDAR-derived DEMs. The surface character and variability of each floodplain were measured using four surface metrics; namely, standard deviation, skewness, coefficient of variation, and standard deviation of curvature from a series of moving window analyses ranging from 50 to 1000 m in radius. The spatial organisation of each floodplain surface was measured using spatial correlograms of the four surface metrics. Surface character, variability, and spatial organisation differed among the eight floodplains; and random, fragmented, highly patchy, and simple gradient spatial patterns were exhibited, depending upon the metric and window size. Differences in surface character and variability among the floodplains became statistically stronger with increasing sampling scale (window size), as did their associations with environmental variables. Sediment yield was consistently associated with differences in surface character and variability, as were flow discharge and variability at smaller sampling scales. Floodplain width was associated with differences in the spatial organization of surface conditions at smaller sampling scales, while valley slope was weakly associated with differences in spatial organisation at larger scales. A comparison of floodplain landscape patterns measured at different scales would improve our understanding of the role that different environmental variables play at different scales and in different geomorphic settings.

  7. Watershed-scale land-use mapping with satellite imagery

    USDA-ARS?s Scientific Manuscript database

    Satellite remote sensing data has many advantages compared with other data sources, such as field methods and aerial photography, for land cover classification. In particular,it is useful in evaluating temporal and spatial effects. In addition, remote sensing can offer a cost-effective means of prov...

  8. Spatiotemporal Interpolation for Environmental Modelling

    PubMed Central

    Susanto, Ferry; de Souza, Paulo; He, Jing

    2016-01-01

    A variation of the reduction-based approach to spatiotemporal interpolation (STI), in which time is treated independently from the spatial dimensions, is proposed in this paper. We reviewed and compared three widely-used spatial interpolation techniques: ordinary kriging, inverse distance weighting and the triangular irregular network. We also proposed a new distribution-based distance weighting (DDW) spatial interpolation method. In this study, we utilised one year of Tasmania’s South Esk Hydrology model developed by CSIRO. Root mean squared error statistical methods were performed for performance evaluations. Our results show that the proposed reduction approach is superior to the extension approach to STI. However, the proposed DDW provides little benefit compared to the conventional inverse distance weighting (IDW) method. We suggest that the improved IDW technique, with the reduction approach used for the temporal dimension, is the optimal combination for large-scale spatiotemporal interpolation within environmental modelling applications. PMID:27509497

  9. Determination of spatial scale of response unit for WASSI-C eco–hydrological model—a case study on the upper Zagunao River watershed of China

    Treesearch

    Ning Liu; Peng-Sen Sun; Shi-Rong Liu; Ge Sun

    2013-01-01

    Main publication is written in Chinese.Aims: Optimal spatial scale of hydrological response unit (HRU) is a precondition for eco-hydrological modeling as it is essential to improve accuracy. Our objective was to evaluate the spatial scale of HRU for application of the WASSSI-C model.Methods: We determined the best HRU scale for the eco-...

  10. Zooming in on Spatial Scaling: Preschool Children and Adults Use Mental Transformations to Scale Spaces

    ERIC Educational Resources Information Center

    Möhring, Wenke; Newcombe, Nora S.; Frick, Andrea

    2014-01-01

    Spatial scaling is an important prerequisite for many spatial tasks and involves an understanding of how distances in different-sized spaces correspond. Previous studies have found evidence for such an understanding in preschoolers; however, the mental processes involved remain unclear. In the present study, we investigated whether children and…

  11. FUEL3-D: A Spatially Explicit Fractal Fuel Distribution Model

    Treesearch

    Russell A. Parsons

    2006-01-01

    Efforts to quantitatively evaluate the effectiveness of fuels treatments are hampered by inconsistencies between the spatial scale at which fuel treatments are implemented and the spatial scale, and detail, with which we model fire and fuel interactions. Central to this scale inconsistency is the resolution at which variability within the fuel bed is considered. Crown...

  12. Accuracy of Scale Conceptions in Science: Mental Maneuverings across Many Orders of Spatial Magnitude

    ERIC Educational Resources Information Center

    Tretter, Thomas R.; Jones, M. Gail; Minogue, James

    2006-01-01

    The use of unifying themes that span the various branches of science is recommended to enhance curricular coherence in science instruction. Conceptions of spatial scale are one such unifying theme. This research explored the accuracy of spatial scale conceptions of science phenomena across a spectrum of 215 participants: fifth grade, seventh…

  13. The Use of Scale-Dependent Precision to Increase Forecast Accuracy in Earth System Modelling

    NASA Astrophysics Data System (ADS)

    Thornes, Tobias; Duben, Peter; Palmer, Tim

    2016-04-01

    At the current pace of development, it may be decades before the 'exa-scale' computers needed to resolve individual convective clouds in weather and climate models become available to forecasters, and such machines will incur very high power demands. But the resolution could be improved today by switching to more efficient, 'inexact' hardware with which variables can be represented in 'reduced precision'. Currently, all numbers in our models are represented as double-precision floating points - each requiring 64 bits of memory - to minimise rounding errors, regardless of spatial scale. Yet observational and modelling constraints mean that values of atmospheric variables are inevitably known less precisely on smaller scales, suggesting that this may be a waste of computer resources. More accurate forecasts might therefore be obtained by taking a scale-selective approach whereby the precision of variables is gradually decreased at smaller spatial scales to optimise the overall efficiency of the model. To study the effect of reducing precision to different levels on multiple spatial scales, we here introduce a new model atmosphere developed by extending the Lorenz '96 idealised system to encompass three tiers of variables - which represent large-, medium- and small-scale features - for the first time. In this chaotic but computationally tractable system, the 'true' state can be defined by explicitly resolving all three tiers. The abilities of low resolution (single-tier) double-precision models and similar-cost high resolution (two-tier) models in mixed-precision to produce accurate forecasts of this 'truth' are compared. The high resolution models outperform the low resolution ones even when small-scale variables are resolved in half-precision (16 bits). This suggests that using scale-dependent levels of precision in more complicated real-world Earth System models could allow forecasts to be made at higher resolution and with improved accuracy. If adopted, this new paradigm would represent a revolution in numerical modelling that could be of great benefit to the world.

  14. Parameterisation of multi-scale continuum perfusion models from discrete vascular networks.

    PubMed

    Hyde, Eoin R; Michler, Christian; Lee, Jack; Cookson, Andrew N; Chabiniok, Radek; Nordsletten, David A; Smith, Nicolas P

    2013-05-01

    Experimental data and advanced imaging techniques are increasingly enabling the extraction of detailed vascular anatomy from biological tissues. Incorporation of anatomical data within perfusion models is non-trivial, due to heterogeneous vessel density and disparate radii scales. Furthermore, previous idealised networks have assumed a spatially repeating motif or periodic canonical cell, thereby allowing for a flow solution via homogenisation. However, such periodicity is not observed throughout anatomical networks. In this study, we apply various spatial averaging methods to discrete vascular geometries in order to parameterise a continuum model of perfusion. Specifically, a multi-compartment Darcy model was used to provide vascular scale separation for the fluid flow. Permeability tensor fields were derived from both synthetic and anatomically realistic networks using (1) porosity-scaled isotropic, (2) Huyghe and Van Campen, and (3) projected-PCA methods. The Darcy pressure fields were compared via a root-mean-square error metric to an averaged Poiseuille pressure solution over the same domain. The method of Huyghe and Van Campen performed better than the other two methods in all simulations, even for relatively coarse networks. Furthermore, inter-compartment volumetric flux fields, determined using the spatially averaged discrete flux per unit pressure difference, were shown to be accurate across a range of pressure boundary conditions. This work justifies the application of continuum flow models to characterise perfusion resulting from flow in an underlying vascular network.

  15. Interannual evolutions of (sub)mesoscale dynamics in the Bay of Biscay and the English Channel

    NASA Astrophysics Data System (ADS)

    Charria, G.; Vandermeirsch, F.; Theetten, S.; Yelekçi, Ö.; Assassi, C.; Audiffren, N. J.

    2016-02-01

    In a context of global change, ocean regions as the Bay of the Biscay and the English Channel represent key domains to estimate the local impact on the coasts of interannual evolutions. Indeed, the coastal (considering in this project regions above the continental shelf) and regional (including the continental slope and the abyssal plain) environments are sensitive to the long-term fluctuations driven by the open ocean, the atmosphere and the watersheds. These evolutions can have impacts on the whole ecosystem. To understand and, by extension, forecast evolutions of these ecosystems, we need to go further in the description and the analysis of the past interannual variability over decadal to pluri-decadal periods. This variability can be described at different spatial scales from small (< 1 km) to basin scales (> 100 km). With a focus on smaller scales, the modelled dynamics, using a Coastal Circulation Model on national computing resources (GENCI/CINES), is discussed from interannual simulations (10 to 53 years) with different spatial (4 km to 1 km) and vertical (40 to 100 sigma levels) resolutions compared with available in situ observations. Exploring vorticity and kinetic energy based diagnostics; dynamical patterns are described including the vertical distribution of the mesoscale activity. Despite the lack of deep and spatially distributed observations, present numerical experiments draw a first picture of the 3D mesoscale distribution and its evolution at interannual time scales.

  16. Differential standard deviation of log-scale intensity based optical coherence tomography angiography.

    PubMed

    Shi, Weisong; Gao, Wanrong; Chen, Chaoliang; Yang, Victor X D

    2017-12-01

    In this paper, a differential standard deviation of log-scale intensity (DSDLI) based optical coherence tomography angiography (OCTA) is presented for calculating microvascular images of human skin. The DSDLI algorithm calculates the variance in difference images of two consecutive log-scale intensity based structural images from the same position along depth direction to contrast blood flow. The en face microvascular images were then generated by calculating the standard deviation of the differential log-scale intensities within the specific depth range, resulting in an improvement in spatial resolution and SNR in microvascular images compared to speckle variance OCT and power intensity differential method. The performance of DSDLI was testified by both phantom and in vivo experiments. In in vivo experiments, a self-adaptive sub-pixel image registration algorithm was performed to remove the bulk motion noise, where 2D Fourier transform was utilized to generate new images with spatial interval equal to half of the distance between two pixels in both fast-scanning and depth directions. The SNRs of signals of flowing particles are improved by 7.3 dB and 6.8 dB on average in phantom and in vivo experiments, respectively, while the average spatial resolution of images of in vivo blood vessels is increased by 21%. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Species richness and biomass explain spatial turnover in ecosystem functioning across tropical and temperate ecosystems.

    PubMed

    Barnes, Andrew D; Weigelt, Patrick; Jochum, Malte; Ott, David; Hodapp, Dorothee; Haneda, Noor Farikhah; Brose, Ulrich

    2016-05-19

    Predicting ecosystem functioning at large spatial scales rests on our ability to scale up from local plots to landscapes, but this is highly contingent on our understanding of how functioning varies through space. Such an understanding has been hampered by a strong experimental focus of biodiversity-ecosystem functioning research restricted to small spatial scales. To address this limitation, we investigate the drivers of spatial variation in multitrophic energy flux-a measure of ecosystem functioning in complex communities-at the landscape scale. We use a structural equation modelling framework based on distance matrices to test how spatial and environmental distances drive variation in community energy flux via four mechanisms: species composition, species richness, niche complementarity and biomass. We found that in both a tropical and a temperate study region, geographical and environmental distance indirectly influence species richness and biomass, with clear evidence that these are the dominant mechanisms explaining variability in community energy flux over spatial and environmental gradients. Our results reveal that species composition and trait variability may become redundant in predicting ecosystem functioning at the landscape scale. Instead, we demonstrate that species richness and total biomass may best predict rates of ecosystem functioning at larger spatial scales. © 2016 The Author(s).

  18. Up, Down, and All Around: Scale-Dependent Spatial Variation in Rocky-Shore Communities of Fildes Peninsula, King George Island, Antarctica

    PubMed Central

    Valdivia, Nelson; Díaz, María J.; Holtheuer, Jorge; Garrido, Ignacio; Huovinen, Pirjo; Gómez, Iván

    2014-01-01

    Understanding the variation of biodiversity along environmental gradients and multiple spatial scales is relevant for theoretical and management purposes. Hereby, we analysed the spatial variability in diversity and structure of intertidal and subtidal macrobenthic Antarctic communities along vertical environmental stress gradients and across multiple horizontal spatial scales. Since biotic interactions and local topographic features are likely major factors for coastal assemblages, we tested the hypothesis that fine-scale processes influence the effects of the vertical environmental stress gradients on the macrobenthic diversity and structure. We used nested sampling designs in the intertidal and subtidal habitats, including horizontal spatial scales ranging from few centimetres to 1000s of metres along the rocky shore of Fildes Peninsula, King George Island. In both intertidal and subtidal habitats, univariate and multivariate analyses showed a marked vertical zonation in taxon richness and community structure. These patterns depended on the horizontal spatial scale of observation, as all analyses showed a significant interaction between height (or depth) and the finer spatial scale analysed. Variance and pseudo-variance components supported our prediction for taxon richness, community structure, and the abundance of dominant species such as the filamentous green alga Urospora penicilliformis (intertidal), the herbivore Nacella concinna (intertidal), the large kelp-like Himantothallus grandifolius (subtidal), and the red crustose red alga Lithothamnion spp. (subtidal). We suggest that in coastal ecosystems strongly governed by physical factors, fine-scale processes (e.g. biotic interactions and refugia availability) are still relevant for the structuring and maintenance of the local communities. The spatial patterns found in this study serve as a necessary benchmark to understand the dynamics and adaptation of natural assemblages in response to observed and predicted environmental changes in Antarctica. PMID:24956114

  19. Scaling Properties of Arctic Sea Ice Deformation in a High‐Resolution Viscous‐Plastic Sea Ice Model and in Satellite Observations

    PubMed Central

    Losch, Martin; Menemenlis, Dimitris

    2018-01-01

    Abstract Sea ice models with the traditional viscous‐plastic (VP) rheology and very small horizontal grid spacing can resolve leads and deformation rates localized along Linear Kinematic Features (LKF). In a 1 km pan‐Arctic sea ice‐ocean simulation, the small‐scale sea ice deformations are evaluated with a scaling analysis in relation to satellite observations of the Envisat Geophysical Processor System (EGPS) in the Central Arctic. A new coupled scaling analysis for data on Eulerian grids is used to determine the spatial and temporal scaling and the coupling between temporal and spatial scales. The spatial scaling of the modeled sea ice deformation implies multifractality. It is also coupled to temporal scales and varies realistically by region and season. The agreement of the spatial scaling with satellite observations challenges previous results with VP models at coarser resolution, which did not reproduce the observed scaling. The temporal scaling analysis shows that the VP model, as configured in this 1 km simulation, does not fully resolve the intermittency of sea ice deformation that is observed in satellite data. PMID:29576996

  20. Scaling Properties of Arctic Sea Ice Deformation in a High-Resolution Viscous-Plastic Sea Ice Model and in Satellite Observations

    NASA Astrophysics Data System (ADS)

    Hutter, Nils; Losch, Martin; Menemenlis, Dimitris

    2018-01-01

    Sea ice models with the traditional viscous-plastic (VP) rheology and very small horizontal grid spacing can resolve leads and deformation rates localized along Linear Kinematic Features (LKF). In a 1 km pan-Arctic sea ice-ocean simulation, the small-scale sea ice deformations are evaluated with a scaling analysis in relation to satellite observations of the Envisat Geophysical Processor System (EGPS) in the Central Arctic. A new coupled scaling analysis for data on Eulerian grids is used to determine the spatial and temporal scaling and the coupling between temporal and spatial scales. The spatial scaling of the modeled sea ice deformation implies multifractality. It is also coupled to temporal scales and varies realistically by region and season. The agreement of the spatial scaling with satellite observations challenges previous results with VP models at coarser resolution, which did not reproduce the observed scaling. The temporal scaling analysis shows that the VP model, as configured in this 1 km simulation, does not fully resolve the intermittency of sea ice deformation that is observed in satellite data.

  1. Scaling Properties of Arctic Sea Ice Deformation in a High-Resolution Viscous-Plastic Sea Ice Model and in Satellite Observations.

    PubMed

    Hutter, Nils; Losch, Martin; Menemenlis, Dimitris

    2018-01-01

    Sea ice models with the traditional viscous-plastic (VP) rheology and very small horizontal grid spacing can resolve leads and deformation rates localized along Linear Kinematic Features (LKF). In a 1 km pan-Arctic sea ice-ocean simulation, the small-scale sea ice deformations are evaluated with a scaling analysis in relation to satellite observations of the Envisat Geophysical Processor System (EGPS) in the Central Arctic. A new coupled scaling analysis for data on Eulerian grids is used to determine the spatial and temporal scaling and the coupling between temporal and spatial scales. The spatial scaling of the modeled sea ice deformation implies multifractality. It is also coupled to temporal scales and varies realistically by region and season. The agreement of the spatial scaling with satellite observations challenges previous results with VP models at coarser resolution, which did not reproduce the observed scaling. The temporal scaling analysis shows that the VP model, as configured in this 1 km simulation, does not fully resolve the intermittency of sea ice deformation that is observed in satellite data.

  2. Genetic structuring of northern myotis (Myotis septentrionalis) at multiple spatial scales

    USGS Publications Warehouse

    Johnson, Joshua B.; Roberts, James H.; King, Timothy L.; Edwards, John W.; Ford, W. Mark; Ray, David A.

    2014-01-01

    Although groups of bats may be genetically distinguishable at large spatial scales, the effects of forest disturbances, particularly permanent land use conversions on fine-scale population structure and gene flow of summer aggregations of philopatric bat species are less clear. We genotyped and analyzed variation at 10 nuclear DNA microsatellite markers in 182 individuals of the forest-dwelling northern myotis (Myotis septentrionalis) at multiple spatial scales, from within first-order watersheds scaling up to larger regional areas in West Virginia and New York. Our results indicate that groups of northern myotis were genetically indistinguishable at any spatial scale we considered, and the collective population maintained high genetic diversity. It is likely that the ability to migrate, exploit small forest patches, and use networks of mating sites located throughout the Appalachian Mountains, Interior Highlands, and elsewhere in the hibernation range have allowed northern myotis to maintain high genetic diversity and gene flow regardless of forest disturbances at local and regional spatial scales. A consequence of maintaining high gene flow might be the potential to minimize genetic founder effects following population declines caused currently by the enzootic White-nose Syndrome.

  3. Teaching the blind to find their way by playing video games.

    PubMed

    Merabet, Lotfi B; Connors, Erin C; Halko, Mark A; Sánchez, Jaime

    2012-01-01

    Computer based video games are receiving great interest as a means to learn and acquire new skills. As a novel approach to teaching navigation skills in the blind, we have developed Audio-based Environment Simulator (AbES); a virtual reality environment set within the context of a video game metaphor. Despite the fact that participants were naïve to the overall purpose of the software, we found that early blind users were able to acquire relevant information regarding the spatial layout of a previously unfamiliar building using audio based cues alone. This was confirmed by a series of behavioral performance tests designed to assess the transfer of acquired spatial information to a large-scale, real-world indoor navigation task. Furthermore, learning the spatial layout through a goal directed gaming strategy allowed for the mental manipulation of spatial information as evidenced by enhanced navigation performance when compared to an explicit route learning strategy. We conclude that the immersive and highly interactive nature of the software greatly engages the blind user to actively explore the virtual environment. This in turn generates an accurate sense of a large-scale three-dimensional space and facilitates the learning and transfer of navigation skills to the physical world.

  4. Fragmentation of urban forms and the environmental consequences: results from a high-spatial resolution model system

    NASA Astrophysics Data System (ADS)

    Tang, U. W.; Wang, Z. S.

    2008-10-01

    Each city has its unique urban form. The importance of urban form on sustainable development has been recognized in recent years. Traditionally, air quality modelling in a city is in a mesoscale with grid resolution of kilometers, regardless of its urban form. This paper introduces a GIS-based air quality and noise model system developed to study the built environment of highly compact urban forms. Compared with traditional mesoscale air quality model system, the present model system has a higher spatial resolution down to individual buildings along both sides of the street. Applying the developed model system in the Macao Peninsula with highly compact urban forms, the average spatial resolution of input and output data is as high as 174 receptor points per km2. Based on this input/output dataset with a high spatial resolution, this study shows that even the highly compact urban forms can be fragmented into a very small geographic scale of less than 3 km2. This is due to the significant temporal variation of urban development. The variation of urban form in each fragment in turn affects air dispersion, traffic condition, and thus air quality and noise in a measurable scale.

  5. A GIS-based multi-source and multi-box modeling approach (GMSMB) for air pollution assessment--a North American case study.

    PubMed

    Wang, Bao-Zhen; Chen, Zhi

    2013-01-01

    This article presents a GIS-based multi-source and multi-box modeling approach (GMSMB) to predict the spatial concentration distributions of airborne pollutant on local and regional scales. In this method, an extended multi-box model combined with a multi-source and multi-grid Gaussian model are developed within the GIS framework to examine the contributions from both point- and area-source emissions. By using GIS, a large amount of data including emission sources, air quality monitoring, meteorological data, and spatial location information required for air quality modeling are brought into an integrated modeling environment. It helps more details of spatial variation in source distribution and meteorological condition to be quantitatively analyzed. The developed modeling approach has been examined to predict the spatial concentration distribution of four air pollutants (CO, NO(2), SO(2) and PM(2.5)) for the State of California. The modeling results are compared with the monitoring data. Good agreement is acquired which demonstrated that the developed modeling approach could deliver an effective air pollution assessment on both regional and local scales to support air pollution control and management planning.

  6. Interacting Social and Environmental Predictors for the Spatial Distribution of Conservation Lands

    PubMed Central

    Baldwin, Robert F.; Leonard, Paul B.

    2015-01-01

    Conservation decisions should be evaluated for how they meet conservation goals at multiple spatial extents. Conservation easements are land use decisions resulting from a combination of social and environmental conditions. An emerging area of research is the evaluation of spatial distribution of easements and their spatial correlates. We tested the relative influence of interacting social and environmental variables on the spatial distribution of conservation easements by ownership category and conservation status. For the Appalachian region of the United States, an area with a long history of human occupation and complex land uses including public-private conservation, we found that settlement, economic, topographic, and environmental data associated with spatial distribution of easements (N = 4813). Compared to random locations, easements were more likely to be found in lower elevations, in areas of greater agricultural productivity, farther from public protected areas, and nearer other human features. Analysis of ownership and conservation status revealed sources of variation, with important differences between local and state government ownerships relative to non-governmental organizations (NGOs), and among U.S. Geological Survey (USGS) GAP program status levels. NGOs were more likely to have easements nearer protected areas, and higher conservation status, while local governments held easements closer to settlement, and on lands of greater agricultural potential. Logistic interactions revealed environmental variables having effects modified by social correlates, and the strongest predictors overall were social (distance to urban area, median household income, housing density, distance to land trust office). Spatial distribution of conservation lands may be affected by geographic area of influence of conservation groups, suggesting that multi-scale conservation planning strategies may be necessary to satisfy local and regional needs for reserve networks. Our results support previous findings and provide an ecoregion-scale view that conservation easements may provide, at local scales, conservation functions on productive, more developable lands. Conservation easements may complement functions of public protected areas but more research should examine relative landscape-level ecological functions of both forms of protection. PMID:26465155

  7. Interacting Social and Environmental Predictors for the Spatial Distribution of Conservation Lands.

    PubMed

    Baldwin, Robert F; Leonard, Paul B

    2015-01-01

    Conservation decisions should be evaluated for how they meet conservation goals at multiple spatial extents. Conservation easements are land use decisions resulting from a combination of social and environmental conditions. An emerging area of research is the evaluation of spatial distribution of easements and their spatial correlates. We tested the relative influence of interacting social and environmental variables on the spatial distribution of conservation easements by ownership category and conservation status. For the Appalachian region of the United States, an area with a long history of human occupation and complex land uses including public-private conservation, we found that settlement, economic, topographic, and environmental data associated with spatial distribution of easements (N = 4813). Compared to random locations, easements were more likely to be found in lower elevations, in areas of greater agricultural productivity, farther from public protected areas, and nearer other human features. Analysis of ownership and conservation status revealed sources of variation, with important differences between local and state government ownerships relative to non-governmental organizations (NGOs), and among U.S. Geological Survey (USGS) GAP program status levels. NGOs were more likely to have easements nearer protected areas, and higher conservation status, while local governments held easements closer to settlement, and on lands of greater agricultural potential. Logistic interactions revealed environmental variables having effects modified by social correlates, and the strongest predictors overall were social (distance to urban area, median household income, housing density, distance to land trust office). Spatial distribution of conservation lands may be affected by geographic area of influence of conservation groups, suggesting that multi-scale conservation planning strategies may be necessary to satisfy local and regional needs for reserve networks. Our results support previous findings and provide an ecoregion-scale view that conservation easements may provide, at local scales, conservation functions on productive, more developable lands. Conservation easements may complement functions of public protected areas but more research should examine relative landscape-level ecological functions of both forms of protection.

  8. Architectural Implications for Spatial Object Association Algorithms

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kumar, V S; Kurc, T; Saltz, J

    2009-01-29

    Spatial object association, also referred to as cross-match of spatial datasets, is the problem of identifying and comparing objects in two or more datasets based on their positions in a common spatial coordinate system. In this work, we evaluate two crossmatch algorithms that are used for astronomical sky surveys, on the following database system architecture configurations: (1) Netezza Performance Server R, a parallel database system with active disk style processing capabilities, (2) MySQL Cluster, a high-throughput network database system, and (3) a hybrid configuration consisting of a collection of independent database system instances with data replication support. Our evaluation providesmore » insights about how architectural characteristics of these systems affect the performance of the spatial crossmatch algorithms. We conducted our study using real use-case scenarios borrowed from a large-scale astronomy application known as the Large Synoptic Survey Telescope (LSST).« less

  9. Modelling the spatial distribution of ammonia emissions in the UK.

    PubMed

    Hellsten, S; Dragosits, U; Place, C J; Vieno, M; Dore, A J; Misselbrook, T H; Tang, Y S; Sutton, M A

    2008-08-01

    Ammonia emissions (NH3) are characterised by a high spatial variability at a local scale. When modelling the spatial distribution of NH3 emissions, it is important to provide robust emission estimates, since the model output is used to assess potential environmental impacts, e.g. exceedance of critical loads. The aim of this study was to provide a new, updated spatial NH3 emission inventory for the UK for the year 2000, based on an improved modelling approach and the use of updated input datasets. The AENEID model distributes NH3 emissions from a range of agricultural activities, such as grazing and housing of livestock, storage and spreading of manures, and fertilizer application, at a 1-km grid resolution over the most suitable landcover types. The results of the emission calculation for the year 2000 are analysed and the methodology is compared with a previous spatial emission inventory for 1996.

  10. A new global anthropogenic heat estimation based on high-resolution nighttime light data

    PubMed Central

    Yang, Wangming; Luan, Yibo; Liu, Xiaolei; Yu, Xiaoyong; Miao, Lijuan; Cui, Xuefeng

    2017-01-01

    Consumption of fossil fuel resources leads to global warming and climate change. Apart from the negative impact of greenhouse gases on the climate, the increasing emission of anthropogenic heat from energy consumption also brings significant impacts on urban ecosystems and the surface energy balance. The objective of this work is to develop a new method of estimating the global anthropogenic heat budget and validate it on the global scale with a high precision and resolution dataset. A statistical algorithm was applied to estimate the annual mean anthropogenic heat (AH-DMSP) from 1992 to 2010 at 1×1 km2 spatial resolution for the entire planet. AH-DMSP was validated for both provincial and city scales, and results indicate that our dataset performs well at both scales. Compared with other global anthropogenic heat datasets, the AH-DMSP has a higher precision and finer spatial distribution. Although there are some limitations, the AH-DMSP could provide reliable, multi-scale anthropogenic heat information, which could be used for further research on regional or global climate change and urban ecosystems. PMID:28829436

  11. Spatial connections in regional climate model rainfall outputs at different temporal scales: Application of network theory

    NASA Astrophysics Data System (ADS)

    Naufan, Ihsan; Sivakumar, Bellie; Woldemeskel, Fitsum M.; Raghavan, Srivatsan V.; Vu, Minh Tue; Liong, Shie-Yui

    2018-01-01

    Understanding the spatial and temporal variability of rainfall has always been a great challenge, and the impacts of climate change further complicate this issue. The present study employs the concepts of complex networks to study the spatial connections in rainfall, with emphasis on climate change and rainfall scaling. Rainfall outputs (during 1961-1990) from a regional climate model (i.e. Weather Research and Forecasting (WRF) model that downscaled the European Centre for Medium-range Weather Forecasts, ECMWF ERA-40 reanalyses) over Southeast Asia are studied, and data corresponding to eight different temporal scales (6-hr, 12-hr, daily, 2-day, 4-day, weekly, biweekly, and monthly) are analyzed. Two network-based methods are applied to examine the connections in rainfall: clustering coefficient (a measure of the network's local density) and degree distribution (a measure of the network's spread). The influence of rainfall correlation threshold (T) on spatial connections is also investigated by considering seven different threshold levels (ranging from 0.5 to 0.8). The results indicate that: (1) rainfall networks corresponding to much coarser temporal scales exhibit properties similar to that of small-world networks, regardless of the threshold; (2) rainfall networks corresponding to much finer temporal scales may be classified as either small-world networks or scale-free networks, depending upon the threshold; and (3) rainfall spatial connections exhibit a transition phase at intermediate temporal scales, especially at high thresholds. These results suggest that the most appropriate model for studying spatial connections may often be different at different temporal scales, and that a combination of small-world and scale-free network models might be more appropriate for rainfall upscaling/downscaling across all scales, in the strict sense of scale-invariance. The results also suggest that spatial connections in the studied rainfall networks in Southeast Asia are weak, especially when more stringent conditions are imposed (i.e. when T is very high), except at the monthly scale.

  12. The spatially resolved star formation history of mergers. A comparative study of the LIRGs IC 1623, NGC 6090, NGC 2623, and Mice

    NASA Astrophysics Data System (ADS)

    Cortijo-Ferrero, C.; González Delgado, R. M.; Pérez, E.; Cid Fernandes, R.; García-Benito, R.; Di Matteo, P.; Sánchez, S. F.; de Amorim, A. L.; Lacerda, E. A. D.; López Fernández, R.; Tadhunter, C.

    2017-11-01

    This paper presents the spatially resolved star formation history (2D-SFH) of a small sample of four local mergers: the early-stage mergers IC 1623, NGC 6090, and the Mice, and the more advanced merger NGC 2623, by analyzing IFS data from the CALIFA survey and PMAS in LArr mode. Full spectral fitting techniques are applied to the datacubes to obtain the spatially resolved mass growth histories, the time evolution of the star formation rate intensity (ΣSFR), and the local specific star formation rate (sSFR), over three different time scales (30 Myr, 300 Myr, and 1 Gyr). The results are compared with non-interacting Sbc-Sc galaxies, to quantify if there is an enhancement of the star formation and to trace its time scale and spatial extent. Our results for the three LIRGs (IC 1623 W, NGC 6090, and NGC 2623) show that a major phase of star formation is occurring in time scales of 107 yr to few 108 yr, with global SFR enhancements of between approximately two and six with respect to main-sequence star forming (MSSF) galaxies. In the two early-stage mergers IC 1623 W and NGC 6090, which are between first pericentre passage and coalescence, the most remarkable increase of the SFR with respect to non-interacting spirals occurred in the last 30 Myr, and it is spatially extended, with enhancements of factors between two and seven both in the centres (r < 0.5 half light radius, HLR), and in the disks (r > 1 HLR). In the more advanced merger NGC 2623 an extended phase of star formation occurred on a longer time scale of 1 Gyr, with a SFR enhancement of a factor of approximately two-to-three larger than the one in Sbc-Sc MSSF galaxies over the same period, probably relic of the first pericentre passage epoch. A SFR enhancement in the last 30 Myr is also present, but only in NGC 2623 centre, by a factor of three. In general, the spatially resolved SFHs of the LIRG-mergers are consistent with the predictions from high spatial resolution simulations. In contrast, the star formation in the Mice, specially in Mice B, is not enhanced but inhibited with respect to Sbc-Sc MSSF galaxies. The fact that the gas fraction of Mice B is smaller than in most non-interacting spirals, and that the Mice are close to a prograde orbit, represents a new challenge for the models, which must cover a larger space of parameters in terms of the availability of gas and the orbital characteristics.

  13. Identification of Volcanic Landforms and Processes on Earth and Mars using Geospatial Analysis (Invited)

    NASA Astrophysics Data System (ADS)

    Fagents, S. A.; Hamilton, C. W.

    2009-12-01

    Nearest neighbor (NN) analysis enables the identification of landforms using non-morphological parameters and can be useful for constraining the geological processes contributing to observed patterns of spatial distribution. Explosive interactions between lava and water can generate volcanic rootless cone (VRC) groups that are well suited to geospatial analyses because they consist of a large number of landforms that share a common formation mechanism. We have applied NN analysis tools to quantitatively compare the spatial distribution of VRCs in the Laki lava flow in Iceland to analogous landforms in the Tartarus Colles Region of eastern Elysium Planitia, Mars. Our results show that rootless eruption sites on both Earth and Mars exhibit systematic variations in spatial organization that are related to variations in the distribution of resources (lava and water) at different scales. Field observations in Iceland reveal that VRC groups are composite structures formed by the emplacement of chronologically and spatially distinct domains. Regionally, rootless cones cluster into groups and domains, but within domains NN distances exhibit random to repelled distributions. This suggests that on regional scales VRCs cluster in locations that contain sufficient resources, whereas on local scales rootless eruption sites tend to self-organize into distributions that maximize the utilization of limited resources (typically groundwater). Within the Laki lava flow, near-surface water is abundant and pre-eruption topography appears to exert the greatest control on both lava inundation regions and clustering of rootless eruption sites. In contrast, lava thickness appears to be the controlling factor in the formation of rootless eruption sites in the Tartarus Colles Region. A critical lava thickness may be required to initiate rootless eruptions on Mars because the lava flows must contain sufficient heat for transferred thermal energy to reach the underlying cryosphere and volatilize buried ground ice. In both environments, the spatial distribution of rootless eruption sites on local scales may either be random, which indicates that rootless eruption sites form independently of one another, or repelled, which implies resource limitation. Where competition for limited groundwater causes rootless eruption sites to develop greater than random NN separation, rootless eruption sites can be modeled as a system of pumping wells that extract water from a shared aquifer, thereby generating repelled distributions due to non-initiation or early cessation of rootless explosive activity at sites with insufficient access to groundwater. Thus statistical NN analyses can be combined with field observations and remote sensing to obtain information about self-organization processes within geological systems and the effects of environmental resource limitation on the spatial distribution of volcanic landforms. NN analyses may also be used to quantitatively compare the spatial distribution of landforms in different planetary environments and for supplying non-morphological evidence to discriminate between feature identities and geological formation mechanisms.

  14. Environmental and Spatial Influences on Biogeography and Community Structure of Benthic Diatoms

    NASA Astrophysics Data System (ADS)

    Plante, C.; Hill-Spanik, K.; Lowry, J.

    2016-02-01

    Several theoretical and practical reasons suggest that benthic microalgae could be useful bioindicators. For instance, an ideal indicator species or community would be associated with a given habitat due to local physical conditions or biotic interactions (i.e., `environmental filtering'), not due to dispersal limitation. Due to their small size, immense abundances, and reliance on passive dispersal, the popular notion about micro-organisms is that `Everything is everywhere, but, the environment selects' (Baas-Becking 1934). Although much recent research concerning planktonic bacteria and dispersal limitation has been conducted, very little in this regard is known about microeukaryotes, especially benthic microbes. The purpose of our study was to identify and compare spatial and environmental influences on benthic diatom community structure and biogeography. In summer 2015, sediment was sampled at various spatial scales from four barrier island beaches in South Carolina, USA, and high-throughput (Ion Torrent) DNA sequencing was used to characterize diatom assemblages. ANOSIM and principal coordinates analysis revealed that communities were statistically distinct on the four islands. Community dissimilarity was compared to both spatial distance and environmental differences to determine potential influences of these variables on community structure. We found that geographic distance had the strongest correlation with community similarity, with and without one anomalous location, while differences in temperature (air, water, and sediment), nutrients, organic matter, and turbidity also had significant but weaker relationships with community structure. Surprisingly, air temperature, which changes on very short time scales, appeared to be the environmental factor most strongly related to diatom species composition, potentially implicating some unmeasured variable (e.g., cloud cover). However, we also found that temperature and geographic distance were strongly correlated. Future research will expand the spatial scope of this preliminary study and employ techniques (partial Mantel tests) to control for co-variation among variables.

  15. Factors Driving Potential Ammonia Oxidation in Canadian Arctic Ecosystems: Does Spatial Scale Matter?

    PubMed Central

    Banerjee, Samiran

    2012-01-01

    Ammonia oxidation is a major process in nitrogen cycling, and it plays a key role in nitrogen limited soil ecosystems such as those in the arctic. Although mm-scale spatial dependency of ammonia oxidizers has been investigated, little is known about the field-scale spatial dependency of aerobic ammonia oxidation processes and ammonia-oxidizing archaeal and bacterial communities, particularly in arctic soils. The purpose of this study was to explore the drivers of ammonia oxidation at the field scale in cryosols (soils with permafrost within 1 m of the surface). We measured aerobic ammonia oxidation potential (both autotrophic and heterotrophic) and functional gene abundance (bacterial amoA and archaeal amoA) in 279 soil samples collected from three arctic ecosystems. The variability associated with quantifying genes was substantially less than the spatial variability observed in these soils, suggesting that molecular methods can be used reliably evaluate spatial dependency in arctic ecosystems. Ammonia-oxidizing archaeal and bacterial communities and aerobic ammonia oxidation were spatially autocorrelated. Gene abundances were spatially structured within 4 m, whereas biochemical processes were structured within 40 m. Ammonia oxidation was driven at small scales (<1m) by moisture and total organic carbon, whereas gene abundance and other edaphic factors drove ammonia oxidation at medium (1 to 10 m) and large (10 to 100 m) scales. In these arctic soils heterotrophs contributed between 29 and 47% of total ammonia oxidation potential. The spatial scale for aerobic ammonia oxidation genes differed from potential ammonia oxidation, suggesting that in arctic ecosystems edaphic, rather than genetic, factors are an important control on ammonia oxidation. PMID:22081570

  16. Space Technology 5 Multipoint Observations of Temporal and Spatial Variability of Field-Aligned Currents

    NASA Technical Reports Server (NTRS)

    Le, G.; Wang, Y.; Slavin, J. A.; Strangeway, R. L.

    2009-01-01

    Space Technology 5 (ST5) is a constellation mission consisting of three microsatellites. It provides the first multipoint magnetic field measurements in low Earth orbit, which enables us to separate spatial and temporal variations. In this paper, we present a study of the temporal variability of field-aligned currents using the ST5 data. We examine the field-aligned current observations during and after a geomagnetic storm and compare the magnetic field profiles at the three spacecraft. The multipoint data demonstrate that mesoscale current structures, commonly embedded within large-scale current sheets, are very dynamic with highly variable current density and/or polarity in approx.10 min time scales. On the other hand, the data also show that the time scales for the currents to be relatively stable are approx.1 min for mesoscale currents and approx.10 min for large-scale currents. These temporal features are very likely associated with dynamic variations of their charge carriers (mainly electrons) as they respond to the variations of the parallel electric field in auroral acceleration region. The characteristic time scales for the temporal variability of mesoscale field-aligned currents are found to be consistent with those of auroral parallel electric field.

  17. Multiresolution comparison of precipitation datasets for large-scale models

    NASA Astrophysics Data System (ADS)

    Chun, K. P.; Sapriza Azuri, G.; Davison, B.; DeBeer, C. M.; Wheater, H. S.

    2014-12-01

    Gridded precipitation datasets are crucial for driving large-scale models which are related to weather forecast and climate research. However, the quality of precipitation products is usually validated individually. Comparisons between gridded precipitation products along with ground observations provide another avenue for investigating how the precipitation uncertainty would affect the performance of large-scale models. In this study, using data from a set of precipitation gauges over British Columbia and Alberta, we evaluate several widely used North America gridded products including the Canadian Gridded Precipitation Anomalies (CANGRD), the National Center for Environmental Prediction (NCEP) reanalysis, the Water and Global Change (WATCH) project, the thin plate spline smoothing algorithms (ANUSPLIN) and Canadian Precipitation Analysis (CaPA). Based on verification criteria for various temporal and spatial scales, results provide an assessment of possible applications for various precipitation datasets. For long-term climate variation studies (~100 years), CANGRD, NCEP, WATCH and ANUSPLIN have different comparative advantages in terms of their resolution and accuracy. For synoptic and mesoscale precipitation patterns, CaPA provides appealing performance of spatial coherence. In addition to the products comparison, various downscaling methods are also surveyed to explore new verification and bias-reduction methods for improving gridded precipitation outputs for large-scale models.

  18. Spatial synchrony of local populations has increased in association with the recent Northern Hemisphere climate trend.

    PubMed

    Post, Eric; Forchhammer, Mads C

    2004-06-22

    According to ecological theory, populations whose dynamics are entrained by environmental correlation face increased extinction risk as environmental conditions become more synchronized spatially. This prediction is highly relevant to the study of ecological consequences of climate change. Recent empirical studies have indicated, for example, that large-scale climate synchronizes trophic interactions and population dynamics over broad spatial scales in freshwater and terrestrial systems. Here, we present an analysis of century-scale, spatially replicated data on local weather and the population dynamics of caribou in Greenland. Our results indicate that spatial autocorrelation in local weather has increased with large-scale climatic warming. This increase in spatial synchrony of environmental conditions has been matched, in turn, by an increase in the spatial synchrony of local caribou populations toward the end of the 20th century. Our results indicate that spatial synchrony in environmental conditions and the populations influenced by them are highly variable through time and can increase with climatic warming. We suggest that if future warming can increase population synchrony, it may also increase extinction risk.

  19. Age, gesture span, and dissociations among component subsystems of working memory.

    PubMed

    Dolman, R; Roy, E A; Dimeck, P T; Hall, C R

    2000-01-01

    Working memory was examined in old and young adults using a series of span tasks, including the forward versions of the visual-spatial and digit span tasks from the Wechsler Memory Scale-Revised, and comparable hand gesture and visual design span tasks. The observation that the young participants performed significantly better on all the tasks except digit span suggested that aging has an impact on some component subsystems of working memory but not others. Analyses of intercorrelations in span performance supports the dissociation among three component subsystems, one for auditory verbal information (the articulatory loop), one for visual-spatial information (visual-spatial scratch-pad), and one for hand/body postural configuration.

  20. [Spatial point pattern analysis of main trees and flowering Fargesia qinlingensis in Abies fargesii forests in Mt Taibai of the Qinling Mountains, China].

    PubMed

    Li, Guo Chun; Song, Hua Dong; Li, Qi; Bu, Shu Hai

    2017-11-01

    In Abies fargesii forests of the giant panda's habitats in Mt. Taibai, the spatial distribution patterns and interspecific associations of main tree species and their spatial associations with the understory flowering Fargesia qinlingensis were analyzed at multiple scales by univariate and bivaria-te O-ring function in point pattern analysis. The results showed that in the A. fargesii forest, the number of A. fargesii was largest but its population structure was in decline. The population of Betula platyphylla was relatively young, with a stable population structure, while the population of B. albo-sinensis declined. The three populations showed aggregated distributions at small scales and gradually showed random distributions with increasing spatial scales. Spatial associations among tree species were mainly showed at small scales and gradually became not spatially associated with increasing scale. A. fargesii and B. platyphylla were positively associated with flowering F. qinlingensis at large and medium scales, whereas B. albo-sinensis showed negatively associated with flowering F. qinlingensis at large and medium scales. The interaction between trees and F. qinlingensis in the habitats of giant panda promoted the dynamic succession and development of forests, which changed the environment of giant panda's habitats in Qinling.

  1. Evaluating historical climate and hydrologic trends in the Central Appalachian region of the United States

    NASA Astrophysics Data System (ADS)

    Gaertner, B. A.; Zegre, N.

    2015-12-01

    Climate change is surfacing as one of the most important environmental and social issues of the 21st century. Over the last 100 years, observations show increasing trends in global temperatures and intensity and frequency of precipitation events such as flooding, drought, and extreme storms. Global circulation models (GCM) show similar trends for historic and future climate indicators, albeit with geographic and topographic variability at regional and local scale. In order to assess the utility of GCM projections for hydrologic modeling, it is important to quantify how robust GCM outputs are compared to robust historical observations at finer spatial scales. Previous research in the United States has primarily focused on the Western and Northeastern regions due to dominance of snow melt for runoff and aquifer recharge but the impact of climate warming in the mountainous central Appalachian Region is poorly understood. In this research, we assess the performance of GCM-generated historical climate compared to historical observations primarily in the context of forcing data for macro-scale hydrologic modeling. Our results show significant spatial heterogeneity of modeled climate indices when compared to observational trends at the watershed scale. Observational data is showing considerable variability within maximum temperature and precipitation trends, with consistent increases in minimum temperature. The geographic, temperature, and complex topographic gradient throughout the central Appalachian region is likely the contributing factor in temperature and precipitation variability. Variable climate changes are leading to more severe and frequent climate events such as temperature extremes and storm events, which can have significant impacts on our drinking water supply, infrastructure, and health of all downstream communities.

  2. Understanding relationships among ecosystem services across spatial scales and over time

    NASA Astrophysics Data System (ADS)

    Qiu, Jiangxiao; Carpenter, Stephen R.; Booth, Eric G.; Motew, Melissa; Zipper, Samuel C.; Kucharik, Christopher J.; Loheide, Steven P., II; Turner, Monica G.

    2018-05-01

    Sustaining ecosystem services (ES), mitigating their tradeoffs and avoiding unfavorable future trajectories are pressing social-environmental challenges that require enhanced understanding of their relationships across scales. Current knowledge of ES relationships is often constrained to one spatial scale or one snapshot in time. In this research, we integrated biophysical modeling with future scenarios to examine changes in relationships among eight ES indicators from 2001–2070 across three spatial scales—grid cell, subwatershed, and watershed. We focused on the Yahara Watershed (Wisconsin) in the Midwestern United States—an exemplar for many urbanizing agricultural landscapes. Relationships among ES indicators changed over time; some relationships exhibited high interannual variations (e.g. drainage vs. food production, nitrate leaching vs. net ecosystem exchange) and even reversed signs over time (e.g. perennial grass production vs. phosphorus yield). Robust patterns were detected for relationships among some regulating services (e.g. soil retention vs. water quality) across three spatial scales, but other relationships lacked simple scaling rules. This was especially true for relationships of food production vs. water quality, and drainage vs. number of days with runoff >10 mm, which differed substantially across spatial scales. Our results also showed that local tradeoffs between food production and water quality do not necessarily scale up, so reducing local tradeoffs may be insufficient to mitigate such tradeoffs at the watershed scale. We further synthesized these cross-scale patterns into a typology of factors that could drive changes in ES relationships across scales: (1) effects of biophysical connections, (2) effects of dominant drivers, (3) combined effects of biophysical linkages and dominant drivers, and (4) artificial scale effects, and concluded with management implications. Our study highlights the importance of taking a dynamic perspective and accounting for spatial scales in monitoring and management to sustain future ES.

  3. Diagnostic Utility of the Bannatyne WISC-III Pattern. Learning Disabilities Practice

    ERIC Educational Resources Information Center

    Smith, Courtney B.; Watkins, Marley W.

    2004-01-01

    Regrouping Wechsler Intelligence Scale for Children-Third Edition (WISC-III) subtests into Bannatyne's spatial, conceptual, and sequential patterns has been thought by many to identify children with learning disabilities (LD). This study investigated the prevalence and diagnostic utility of WISC-III Bannatyne patterns by comparing 1,302 children…

  4. The Structure of Cognitive Abilities in Youths with Manic Symptoms: A Factorial Invariance Study

    ERIC Educational Resources Information Center

    Beaujean, A. Alexander; Freeman, Megan Joseph; Youngstrom, Eric; Carlson, Gabrielle

    2012-01-01

    This study compared the structure of cognitive ability (specifically, verbal/crystallized ["Gc"] and visual-spatial ability ["Gv"]), as measured in the Wechsler Intelligence Scale for Children, in youth with manic symptoms with a nationally representative group of similarly aged youth. Multigroup confirmatory factor analysis…

  5. Moisture, plant-plant interactions and herbivory as drivers of rangeland restoration success in the western US

    USDA-ARS?s Scientific Manuscript database

    Restoration efforts in the western US occur across a diverse array of plant communities and climatic conditions. Restoration is likely constrained by different factors in different locations, but few efforts have compared the outcomes of rangeland restoration experiments across broad spatial scales....

  6. Implementation of a flow-dependent background error correlation length scale formulation in the NEMOVAR OSTIA system

    NASA Astrophysics Data System (ADS)

    Fiedler, Emma; Mao, Chongyuan; Good, Simon; Waters, Jennifer; Martin, Matthew

    2017-04-01

    OSTIA is the Met Office's Operational Sea Surface Temperature (SST) and Ice Analysis system, which produces L4 (globally complete, gridded) analyses on a daily basis. Work is currently being undertaken to replace the original OI (Optimal Interpolation) data assimilation scheme with NEMOVAR, a 3D-Var data assimilation method developed for use with the NEMO ocean model. A dual background error correlation length scale formulation is used for SST in OSTIA, as implemented in NEMOVAR. Short and long length scales are combined according to the ratio of the decomposition of the background error variances into short and long spatial correlations. The pre-defined background error variances vary spatially and seasonally, but not on shorter time-scales. If the derived length scales applied to the daily analysis are too long, SST features may be smoothed out. Therefore a flow-dependent component to determining the effective length scale has also been developed. The total horizontal gradient of the background SST field is used to identify regions where the length scale should be shortened. These methods together have led to an improvement in the resolution of SST features compared to the previous OI analysis system, without the introduction of spurious noise. This presentation will show validation results for feature resolution in OSTIA using the OI scheme, the dual length scale NEMOVAR scheme, and the flow-dependent implementation.

  7. [Spatial distribution and scale effect of species diversity of secondary forests in montane region of eastern Liaoning Province, China.

    PubMed

    Deng, Li Ping; Bai, Xue Jiao; Qin, Sheng Jin; Wei, Ya Wei; Zhou, Yong Bin; Li, Lu Lu; Niu, Sha Sha; Han, Mei Na

    2016-07-01

    With secondary forest in the montane region of eastern Liaoning Province as research object, this paper analyzed the spatial distribution and scale effect of Gleason richness index, Simpson dominance index, Shannon diversity index and Pielou evenness index in a 4 hm 2 plot. The results showed that spatial distributions of the four diversity indices showed higher spatial heterogeneity. Variance of the four diversity indices varied with increasing scale. Coefficients of variation of the four diversity indices decreased with increasing scale. The four diversity indices of the tree layer were higher than those of the shrub layer, and the variation tendency varied with increasing scale. The results indicated that sampling scale should be taken into account when studying species diversity in the montane region of eastern Liaoning Province.

  8. Environmental Controls on Multi-Scale Soil Nutrient Variability in the Tropics: the Importance of Land-Cover Change

    NASA Astrophysics Data System (ADS)

    Holmes, K. W.; Kyriakidis, P. C.; Chadwick, O. A.; Matricardi, E.; Soares, J. V.; Roberts, D. A.

    2003-12-01

    The natural controls on soil variability and the spatial scales at which correlation exists among soil and environmental variables are critical information for evaluating the effects of deforestation. We detect different spatial scales of variability in soil nutrient levels over a large region (hundreds of thousands of km2) in the Amazon, analyze correlations among soil properties at these different scales, and evaluate scale-specific relationships among soil properties and the factors potentially driving soil development. Statistical relationships among physical drivers of soil formation, namely geology, precipitation, terrain attributes, classified soil types, and land cover derived from remote sensing, were included to determine which factors are related to soil biogeochemistry at each spatial scale. Surface and subsurface soil profile data from a 3000 sample database collected in Rond“nia, Brazil, were used to investigate patterns in pH, phosphorus, nitrogen, organic carbon, effective cation exchange capacity, calcium, magnesium, potassium, aluminum, sand, and clay in this environment grading from closed canopy tropical forest to savanna. We focus on pH in this presentation for simplicity, because pH is the single most important soil characteristic for determining the chemical environment of higher plants and soil microbial activity. We determined four spatial scales which characterize integrated patterns of soil chemistry: less than 3 km; 3 to 10 km; 10 to 68 km; and from 68 to 550 km (extent of study area). Although the finest observable scale was fixed by the field sampling density, the coarser scales were determined from relationships in the data through coregionalization modeling, rather than being imposed by the researcher. Processes which affect soils over short distances, such as land cover and terrain attributes, were good predictors of fine scale spatial components of nutrients; processes which affect soils over very large distances, such as precipitation and geology, were better predictors at coarse spatial scales. However, this result may be affected by the resolution of the available predictor maps. Land-cover change exerted a strong influence on soil chemistry at fine spatial scales, and had progressively less of an effect at coarser scales. It is important to note that land cover, and interactions among land cover and the other predictors, continued to be a significant predictor of soil chemistry at every spatial scale up to hundreds of thousands of kilometers.

  9. The complex roles of space and environment in structuring functional, taxonomic and phylogenetic beta diversity of frogs in the Atlantic Forest

    PubMed Central

    Luiz, Amom Mendes; Sawaya, Ricardo J.

    2018-01-01

    Ecological communities are complex entities that can be maintained and structured by niche-based processes such as environmental conditions, and spatial processes such as dispersal. Thus, diversity patterns may be shaped simultaneously at different spatial scales by very distinct processes. Herein we assess whether and how functional, taxonomic, and phylogenetic beta diversities of frog tadpoles are explained by environmental and/or spatial predictors. We implemented a distance–based redundancy analysis to explore variation in components of beta diversity explained by pure environmental and pure spatial predictors, as well as their interactions, at both fine and broad spatial scales. Our results indicated important but complex roles of spatial and environmental predictors in structuring phylogenetic, taxonomic and functional beta diversities. The pure fine-scales spatial fraction was more important in structuring all beta diversity components, especially to functional and taxonomical spatial turnover. Environmental variables such as canopy cover and vegetation structure were important predictors of all components, but especially to functional and taxonomic beta diversity. We emphasize that distinct factors related to environment and space are affecting distinct components of beta diversity in different ways. Although weaker, phylogenetic beta diversity, which is structured more on biogeographical scales, and thus can be represented by spatially structured processes, was more related to broad spatial processes than other components. However, selected fine-scale spatial predictors denoted negative autocorrelation, which may be revealing the existence of differences in unmeasured habitat variables among samples. Although overall important, local environmental-based processes explained better functional and taxonomic beta diversity, as these diversity components carry an important ecological value. We highlight the importance of assessing different components of diversity patterns at different scales by spatially explicit models in order to improve our understanding of community structure and help to unravel the complex nature of biodiversity. PMID:29672575

  10. Effects of spatial scale of sampling on food web structure

    PubMed Central

    Wood, Spencer A; Russell, Roly; Hanson, Dieta; Williams, Richard J; Dunne, Jennifer A

    2015-01-01

    This study asks whether the spatial scale of sampling alters structural properties of food webs and whether any differences are attributable to changes in species richness and connectance with scale. Understanding how different aspects of sampling effort affect ecological network structure is important for both fundamental ecological knowledge and the application of network analysis in conservation and management. Using a highly resolved food web for the marine intertidal ecosystem of the Sanak Archipelago in the Eastern Aleutian Islands, Alaska, we assess how commonly studied properties of network structure differ for 281 versions of the food web sampled at five levels of spatial scale representing six orders of magnitude in area spread across the archipelago. Species (S) and link (L) richness both increased by approximately one order of magnitude across the five spatial scales. Links per species (L/S) more than doubled, while connectance (C) decreased by approximately two-thirds. Fourteen commonly studied properties of network structure varied systematically with spatial scale of sampling, some increasing and others decreasing. While ecological network properties varied systematically with sampling extent, analyses using the niche model and a power-law scaling relationship indicate that for many properties, this apparent sensitivity is attributable to the increasing S and decreasing C of webs with increasing spatial scale. As long as effects of S and C are accounted for, areal sampling bias does not have a special impact on our understanding of many aspects of network structure. However, attention does need be paid to some properties such as the fraction of species in loops, which increases more than expected with greater spatial scales of sampling. PMID:26380704

  11. Landscape object-based analysis of wetland plant functional types: the effects of spatial scale, vegetation classes and classifier methods

    NASA Astrophysics Data System (ADS)

    Dronova, I.; Gong, P.; Wang, L.; Clinton, N.; Fu, W.; Qi, S.

    2011-12-01

    Remote sensing-based vegetation classifications representing plant function such as photosynthesis and productivity are challenging in wetlands with complex cover and difficult field access. Recent advances in object-based image analysis (OBIA) and machine-learning algorithms offer new classification tools; however, few comparisons of different algorithms and spatial scales have been discussed to date. We applied OBIA to delineate wetland plant functional types (PFTs) for Poyang Lake, the largest freshwater lake in China and Ramsar wetland conservation site, from 30-m Landsat TM scene at the peak of spring growing season. We targeted major PFTs (C3 grasses, C3 forbs and different types of C4 grasses and aquatic vegetation) that are both key players in system's biogeochemical cycles and critical providers of waterbird habitat. Classification results were compared among: a) several object segmentation scales (with average object sizes 900-9000 m2); b) several families of statistical classifiers (including Bayesian, Logistic, Neural Network, Decision Trees and Support Vector Machines) and c) two hierarchical levels of vegetation classification, a generalized 3-class set and more detailed 6-class set. We found that classification benefited from object-based approach which allowed including object shape, texture and context descriptors in classification. While a number of classifiers achieved high accuracy at the finest pixel-equivalent segmentation scale, the highest accuracies and best agreement among algorithms occurred at coarser object scales. No single classifier was consistently superior across all scales, although selected algorithms of Neural Network, Logistic and K-Nearest Neighbors families frequently provided the best discrimination of classes at different scales. The choice of vegetation categories also affected classification accuracy. The 6-class set allowed for higher individual class accuracies but lower overall accuracies than the 3-class set because individual classes differed in scales at which they were best discriminated from others. Main classification challenges included a) presence of C3 grasses in C4-grass areas, particularly following harvesting of C4 reeds and b) mixtures of emergent, floating and submerged aquatic plants at sub-object and sub-pixel scales. We conclude that OBIA with advanced statistical classifiers offers useful instruments for landscape vegetation analyses, and that spatial scale considerations are critical in mapping PFTs, while multi-scale comparisons can be used to guide class selection. Future work will further apply fuzzy classification and field-collected spectral data for PFT analysis and compare results with MODIS PFT products.

  12. Multisource Imaging of Seasonal Dynamics in Land Surface Phenology Using Harmonized Landsat and Sentinel-2 Data

    NASA Astrophysics Data System (ADS)

    Melaas, E. K.; Graesser, J.; Friedl, M. A.

    2017-12-01

    Land surface phenology, including the timing of phenophase transitions and the entire seasonal cycle of surface reflectance and vegetation indices, is important for a myriad of applications including monitoring the response of terrestrial ecosystems to climate variability and extreme events, and land cover mapping. While methods to monitor and map phenology from coarse spatial resolution instruments such as MODIS are now relatively mature, the spatial resolution of these instruments is inadequate where vegetation properties, land use, and land cover vary at spatial scales of tens of meters. To address this need, algorithms to map phenology at moderate spatial resolution (30 m) using data from Landsat have recently been developed. However, the 16-day repeat cycle of Landsat presents significant challenges in regions where changes are rapid or where cloud cover reduces the frequency of clear-sky views. The European Space Agency's Sentinel-2 satellites, which are designed to provide moderate spatial resolution data at 5-day revisit frequency near the equator and 3 day revisit frequency in the mid-latitudes, will alleviate this constraint in many parts of the world. Here, we use harmonized time series of data from Sentinel-2A and Landsat OLI (HLS) to quantify the timing of land surface phenology metrics across a sample of deciduous forest and grassland-dominated sites, and then compare these estimates with co-located in situ observations. The resulting phenology maps demonstrate the improved information related to landscape-scale features that can be estimated from HLS data relative to comparable metrics from coarse spatial resolution instruments. For example, our results based on HLS data reveal spatial patterns in phenological metrics related to topographic and land cover controls that are not resolved in MODIS data, and show good agreement with transition dates observed from in situ measurements. Our results also show systematic bias toward earlier timing of spring, which is caused by inadequate density of observations that will be mitigated once data from Sentinel-2B are available. Overall, our results highlight the potential for using moderate spatial resolution data from Landsat and Sentinel-2 for developing operational phenology algorithms and products in support of the science community.

  13. Mitigation benefits of forestation greatly varies on short spatial scale

    NASA Astrophysics Data System (ADS)

    Yakir, Dan; Rotenberg, Eyal; Rohatin, Shani; Ramati, Efrat; Asaf, David; Dicken, Uri

    2016-04-01

    Mitigation of global warming by forestation is controversial because of its linkage to increasing surface energy load and associated surface warming. Such tradeoffs between cooling associated with carbon sequestration and warming associated with radiative effects have been considered predominantly on large spatial scales, indicating benefits of forestation mainly in the tropics but not in the boreal regions. Using mobile laboratory for measuring CO2, water and energy flux in forest and non-forest ecosystem along the climatic gradient in Israel over three years, we show that the balance between cooling and warming effects of forestation can be transformed across small spatial scale. While converting shrubland to pine forest in a semi-arid site (280 mm annual precipitations) requires several decades of carbon sequestration to balance the radiative warming effects, similar land use change under moist Mediterranean conditions (780 mm annual precipitation) just ~200 km away showed reversal of this balance. Specifically, the results indicated that in the study region (semi-arid to humid Mediterranean), net absorb radiation in pine forests is always larger than in open space ecosystems, resulting in surface warming effects (the so-called albedo effect). Similarly, depression of thermal radiation emission, mainly due canopy skin surface cooling associated with the 'convector effect' in forests compared with shrubland ecosystems also appears in all sites. But both effects decrease by about 1/2 in going from the semi-arid to the humid Mediterranean sites, while enhanced productivity of forest compared to grassland increase about fourfold. The results indicate a greater potential for forestation as climate change mitigation strategy than previously assumed.

  14. Spatial scale of similarity as an indicator of metacommunity stability in exploited marine systems.

    PubMed

    Shackell, Nancy L; Fisher, Jonathan A D; Frank, Kenneth T; Lawton, Peter

    2012-01-01

    The spatial scale of similarity among fish communities is characteristically large in temperate marine systems: connectivity is enhanced by high rates of dispersal during the larval/juvenile stages and the increased mobility of large-bodied fish. A larger spatial scale of similarity (low beta diversity) is advantageous in heavily exploited systems because locally depleted populations are more likely to be "rescued" by neighboring areas. We explored whether the spatial scale of similarity changed from 1970 to 2006 due to overfishing of dominant, large-bodied groundfish across a 300 000-km2 region of the Northwest Atlantic. Annually, similarities among communities decayed slowly with increasing geographic distance in this open system, but through time the decorrelation distance declined by 33%, concomitant with widespread reductions in biomass, body size, and community evenness. The decline in connectivity stemmed from an erosion of community similarity among local subregions separated by distances as small as 100 km. Larger fish, of the same species, contribute proportionally more viable offspring, so observed body size reductions will have affected maternal output. The cumulative effect of nonlinear maternal influences on egg/larval quality may have compromised the spatial scale of effective larval dispersal, which may account for the delayed recovery of certain member species. Our study adds strong support for using the spatial scale of similarity as an indicator of metacommunity stability both to understand the spatial impacts of exploitation and to refine how spatial structure is used in management plans.

  15. InSAR and GPS Time Series Analysis in Areas with Large Scale Hydrological Deformation: Separating Signal From Noise at Varying Length Scales in the San Joaquin Valley

    NASA Astrophysics Data System (ADS)

    Murray, K. D.; Lohman, R.

    2017-12-01

    Areas of large-scale subsidence are observed over much of the San Joaquin Valley of California due to the extraction of groundwater and hydrocarbons from the subsurface.These signals span regions with spatial extents of up to 100 km and have rates of up to 45 cm/yr or more. InSAR and GPS are complementary methods commonly used to measure such ground displacements and can provide important constraints on crustal deformation models, support groundwater studies, and inform water resource management efforts. However, current standard methods for processing these data sets and creating displacement time series are suboptimal for the deformation observed in areas like the San Joaquin Valley because (1) the ground surface properties are constantly changing due largely to agricultural activity, resulting in low coherence in half or more of a SAR frame, and (2) the deformation signals are distributed throughout the SAR frames, and are comparable to the size of the frames themselves. Therefore, referencing areas of deformation to non-deforming areas and correcting for long wavelength signals (e.g. atmospheric delays, orbital errors) is particularly difficult. We address these challenges by exploiting pixels that are stable in space and time, and use them for weighted spatial averaging and selective filtering before unwrapping. We then compare a range of methods for both long wavelength corrections and referencing via automatic partitioning of non-deforming areas, then benchmark results against continuous GPS measurements. Our final time series consist of nearly 15 years of displacement measurements from continuous GPS data, and Envisat, ALOS-1, Sentinel SAR data, and show significant temporal and spatial variations. We find that the choice of reference and long wavelength corrections can significantly bias long-term rate and seasonal amplitude estimates, causing variations of as much as 100% of the mean estimate. As we enter an era with free and open data access and regular observations plans from missions such as NISAR and the Sentinel constellation, our approach will help users evaluate the significance of observed deformation at a range of spatial scales and in areas with challenging surface properties.

  16. An initial assessment of a SMAP soil moisture disaggregation scheme using TIR surface evaporation data over the continental United States

    NASA Astrophysics Data System (ADS)

    Mishra, Vikalp; Ellenburg, W. Lee; Griffin, Robert E.; Mecikalski, John R.; Cruise, James F.; Hain, Christopher R.; Anderson, Martha C.

    2018-06-01

    The Soil Moisture Active Passive (SMAP) mission is dedicated toward global soil moisture mapping. Typically, an L-band microwave radiometer has spatial resolution on the order of 36-40 km, which is too coarse for many specific hydro-meteorological and agricultural applications. With the failure of the SMAP active radar within three months of becoming operational, an intermediate (9-km) and finer (3-km) scale soil moisture product solely from the SMAP mission is no longer possible. Therefore, the focus of this study is a disaggregation of the 36-km resolution SMAP passive-only surface soil moisture (SSM) using the Soil Evaporative Efficiency (SEE) approach to spatial scales of 3-km and 9-km. The SEE was computed using thermal-infrared (TIR) estimation of surface evaporation over Continental U.S. (CONUS). The disaggregation results were compared with the 3 months of SMAP-Active (SMAP-A) and Active/Passive (AP) products, while comparisons with SMAP-Enhanced (SMAP-E), SMAP-Passive (SMAP-P), as well as with more than 180 Soil Climate Analysis Network (SCAN) stations across CONUS were performed for a 19 month period. At the 9-km spatial scale, the TIR-Downscaled data correlated strongly with the SMAP-E SSM both spatially (r = 0.90) and temporally (r = 0.87). In comparison with SCAN observations, overall correlations of 0.49 and 0.47; bias of -0.022 and -0.019 and unbiased RMSD of 0.105 and 0.100 were found for SMAP-E and TIR-Downscaled SSM across the Continental U.S., respectively. At 3-km scale, TIR-Downscaled and SMAP-A had a mean temporal correlation of only 0.27. In terms of gain statistics, the highest percentage of SCAN sites with positive gains (>55%) was observed with the TIR-Downscaled SSM at 9-km. Overall, the TIR-based downscaled SSM showed strong correspondence with SMAP-E; compared to SCAN, and overall both SMAP-E and TIR-Downscaled performed similarly, however, gain statistics show that TIR-Downscaled SSM slightly outperformed SMAP-E.

  17. Interactions across spatial scales among forest dieback, fire, and erosion in northern New Mexico landscapes

    USGS Publications Warehouse

    Allen, Craig D.

    2007-01-01

    Ecosystem patterns and disturbance processes at one spatial scale often interact with processes at another scale, and the result of such cross-scale interactions can be nonlinear dynamics with thresholds. Examples of cross-scale pattern-process relationships and interactions among forest dieback, fire, and erosion are illustrated from northern New Mexico (USA) landscapes, where long-term studies have recently documented all of these disturbance processes. For example, environmental stress, operating on individual trees, can cause tree death that is amplified by insect mortality agents to propagate to patch and then landscape or even regional-scale forest dieback. Severe drought and unusual warmth in the southwestern USA since the late 1990s apparently exceeded species-specific physiological thresholds for multiple tree species, resulting in substantial vegetation mortality across millions of hectares of woodlands and forests in recent years. Predictions of forest dieback across spatial scales are constrained by uncertainties associated with: limited knowledge of species-specific physiological thresholds; individual and site-specific variation in these mortality thresholds; and positive feedback loops between rapidly-responding insect herbivore populations and their stressed plant hosts, sometimes resulting in nonlinear “pest” outbreak dynamics. Fire behavior also exhibits nonlinearities across spatial scales, illustrated by changes in historic fire regimes where patch-scale grazing disturbance led to regional-scale collapse of surface fire activity and subsequent recent increases in the scale of extreme fire events in New Mexico. Vegetation dieback interacts with fire activity by modifying fuel amounts and configurations at multiple spatial scales. Runoff and erosion processes are also subject to scale-dependent threshold behaviors, exemplified by ecohydrological work in semiarid New Mexico watersheds showing how declines in ground surface cover lead to non-linear increases in bare patch connectivity and thereby accelerated runoff and erosion at hillslope and watershed scales. Vegetation dieback, grazing, and fire can change land surface properties and cross-scale hydrologic connectivities, directly altering ecohydrological patterns of runoff and erosion. The interactions among disturbance processes across spatial scales can be key drivers in ecosystem dynamics, as illustrated by these studies of recent landscape changes in northern New Mexico. To better anticipate and mitigate accelerating human impacts to the planetary ecosystem at all spatial scales, improvements are needed in our conceptual and quantitative understanding of cross-scale interactions among disturbance processes.

  18. Spatial analysis of toxic emissions in LCA: a sub-continental nested USEtox model with freshwater archetypes.

    PubMed

    Kounina, Anna; Margni, Manuele; Shaked, Shanna; Bulle, Cécile; Jolliet, Olivier

    2014-08-01

    This paper develops continent-specific factors for the USEtox model and analyses the accuracy of different model architectures, spatial scales and archetypes in evaluating toxic impacts, with a focus on freshwater pathways. Inter-continental variation is analysed by comparing chemical fate and intake fractions between sub-continental zones of two life cycle impact assessment models: (1) the nested USEtox model parameterized with sub-continental zones and (2) the spatially differentiated IMPACTWorld model with 17 interconnected sub-continental regions. Substance residence time in water varies by up to two orders of magnitude among the 17 zones assessed with IMPACTWorld and USEtox, and intake fraction varies by up to three orders of magnitude. Despite this variation, the nested USEtox model succeeds in mimicking the results of the spatially differentiated model, with the exception of very persistent volatile pollutants that can be transported to polar regions. Intra-continental variation is analysed by comparing fate and intake fractions modelled with the a-spatial (one box) IMPACT Europe continental model vs. the spatially differentiated version of the same model. Results show that the one box model might overestimate chemical fate and characterisation factors for freshwater eco-toxicity of persistent pollutants by up to three orders of magnitude for point source emissions. Subdividing Europe into three archetypes, based on freshwater residence time (how long it takes water to reach the sea), improves the prediction of fate and intake fractions for point source emissions, bringing them within a factor five compared to the spatial model. We demonstrated that a sub-continental nested model such as USEtox, with continent-specific parameterization complemented with freshwater archetypes, can thus represent inter- and intra-continental spatial variations, whilst minimizing model complexity. Copyright © 2014 Elsevier Ltd. All rights reserved.

  19. River eutrophication: irrigated vs. non-irrigated agriculture through different spatial scales.

    PubMed

    Monteagudo, Laura; Moreno, José Luis; Picazo, Félix

    2012-05-15

    The main objective of this study was to determine how spatial scale may affect the results when relating land use to nutrient enrichment of rivers and, secondly, to investigate which agricultural practices are more responsible for river eutrophication in the study area. Agriculture was split into three subclasses (irrigated, non-irrigated and low-impact agriculture) which were correlated to stream nutrient concentration on four spatial scales: large scale (drainage area of total subcatchment and 100 m wide subcatchment corridors) and local scale (5 and 1 km radius buffers). Nitrate, ammonium and orthophosphate concentrations and land use composition (agriculture, urban and forest) were measured at 130 river reaches in south-central Spain during the 2001-2009 period. Results suggested that different spatial scales may lead to different conclusions. Spatial autocorrelation and the inadequate representation of some land uses produced unreal results on large scales. Conversely, local scales did not show data autocorrelation and agriculture subclasses were well represented. The local scale of 1 km buffer was the most appropriate to detect river eutrophication in central Spanish rivers, with irrigated cropland as the main cause of river pollution by nitrate. As regards river management, a threshold of 50% irrigated cropland within a 1 km radius buffer has been obtained using breakpoint regression analysis. This means that no more than 50% of irrigation croplands should be allowed near river banks in order to avoid river eutrophication. Finally, a methodological approach is proposed to choose the appropriate spatial scale when studying river eutrophication caused by diffuse pollution like agriculture. Copyright © 2012 Elsevier Ltd. All rights reserved.

  20. Atomic scale imaging of magnetic circular dichroism by achromatic electron microscopy.

    PubMed

    Wang, Zechao; Tavabi, Amir H; Jin, Lei; Rusz, Ján; Tyutyunnikov, Dmitry; Jiang, Hanbo; Moritomo, Yutaka; Mayer, Joachim; Dunin-Borkowski, Rafal E; Yu, Rong; Zhu, Jing; Zhong, Xiaoyan

    2018-03-01

    In order to obtain a fundamental understanding of the interplay between charge, spin, orbital and lattice degrees of freedom in magnetic materials and to predict and control their physical properties 1-3 , experimental techniques are required that are capable of accessing local magnetic information with atomic-scale spatial resolution. Here, we show that a combination of electron energy-loss magnetic chiral dichroism 4 and chromatic-aberration-corrected transmission electron microscopy, which reduces the focal spread of inelastically scattered electrons by orders of magnitude when compared with the use of spherical aberration correction alone, can achieve atomic-scale imaging of magnetic circular dichroism and provide element-selective orbital and spin magnetic moments atomic plane by atomic plane. This unique capability, which we demonstrate for Sr 2 FeMoO 6 , opens the door to local atomic-level studies of spin configurations in a multitude of materials that exhibit different types of magnetic coupling, thereby contributing to a detailed understanding of the physical origins of magnetic properties of materials at the highest spatial resolution.

  1. Source biases in midlatitude magnetotelluric transfer functions due to Pc3-4 geomagnetic pulsations

    NASA Astrophysics Data System (ADS)

    Murphy, Benjamin S.; Egbert, Gary D.

    2018-01-01

    The magnetotelluric (MT) method for imaging the electrical conductivity structure of the Earth is based on the assumption that source magnetic fields can be considered quasi-uniform, such that the spatial scale of the inducing source is much larger than the intrinsic length scale of the electromagnetic induction process (the skin depth). Here, we show using EarthScope MT data that short spatial scale source magnetic fields from geomagnetic pulsations (Pc's) can violate this fundamental assumption. Over resistive regions of the Earth, the skin depth can be comparable to the short meridional range of Pc3-4 disturbances that are generated by geomagnetic field-line resonances (FLRs). In such cases, Pc's can introduce narrow-band bias in MT transfer function estimates at FLR eigenperiods ( 10-100 s). Although it appears unlikely that these biases will be a significant problem for data inversions, further study is necessary to understand the conditions under which they may distort inverse solutions.[Figure not available: see fulltext.

  2. Numerical analysis of scalar dissipation length-scales and their scaling properties

    NASA Astrophysics Data System (ADS)

    Vaishnavi, Pankaj; Kronenburg, Andreas

    2006-11-01

    Scalar dissipation rate, χ, is fundamental to the description of scalar-mixing in turbulent non-premixed combustion. Most contributions to the statistics for χ come from the finest turbulent mixing-scales and thus its adequate characterisation requires good resolution. Reliable χ-measurement is complicated by the trade-off between higher resolution and greater signal-to-noise ratio. Thus, the present numerical study utilises the error-free mixture fraction, Z, and fluid mechanical data from the turbulent reacting jet DNS of Pantano (2004). The aim is to quantify the resolution requirements for χ-measurement in terms of easily measurable properties of the flow like the integral-scale Reynolds number, Reδ, using spectral and spatial-filtering [cf. Barlow and Karpetis (2005)] analyses. Analysis of the 1-D cross-stream dissipation spectra enables the estimation of the dissipation length scales. It is shown that these spectrally-computed scales follow the expected Kolmogorov scaling with Reδ-0.75 . The work also involves local smoothening of the instantaneous χ-field over a non-overlapping spatial-interval (filter-width, wf), to study the smoothened χ-value as a function of wf, as wf is extrapolated to the smallest scale of interest. The dissipation length-scales thus captured show a stringent Reδ-1 scaling, compared to the usual Kolmogorov-type. This concurs with the criterion of 'resolution adequacy' of the DNS, as set out by Sreenivasan (2004) using the theory of multi-fractals.

  3. Spatial Variability of Snowpack Properties On Small Slopes

    NASA Astrophysics Data System (ADS)

    Pielmeier, C.; Kronholm, K.; Schneebeli, M.; Schweizer, J.

    The spatial variability of alpine snowpacks is created by a variety of parameters like deposition, wind erosion, sublimation, melting, temperature, radiation and metamor- phism of the snow. Spatial variability is thought to strongly control the avalanche initi- ation and failure propagation processes. Local snowpack measurements are currently the basis for avalanche warning services and there exist contradicting hypotheses about the spatial continuity of avalanche active snow layers and interfaces. Very little about the spatial variability of the snowpack is known so far, therefore we have devel- oped a systematic and objective method to measure the spatial variability of snowpack properties, layering and its relation to stability. For a complete coverage, the analysis of the spatial variability has to entail all scales from mm to km. In this study the small to medium scale spatial variability is investigated, i.e. the range from centimeters to tenths of meters. During the winter 2000/2001 we took systematic measurements in lines and grids on a flat snow test field with grid distances from 5 cm to 0.5 m. Fur- thermore, we measured systematic grids with grid distances between 0.5 m and 2 m in undisturbed flat fields and on small slopes above the tree line at the Choerbschhorn, in the region of Davos, Switzerland. On 13 days we measured the spatial pattern of the snowpack stratigraphy with more than 110 snow micro penetrometer measure- ments at slopes and flat fields. Within this measuring grid we placed 1 rutschblock and 12 stuffblock tests to measure the stability of the snowpack. With the large num- ber of measurements we are able to use geostatistical methods to analyse the spatial variability of the snowpack. Typical correlation lengths are calculated from semivari- ograms. Discerning the systematic trends from random spatial variability is analysed using statistical models. Scale dependencies are shown and recurring scaling patterns are outlined. The importance of the small and medium scale spatial variability for the larger (kilometer) scale spatial variability as well as for the avalanche formation are discussed. Finally, an outlook on spatial models for the snowpack variability is given.

  4. Local and landscape associations between wintering dabbling ducks and wetland complexes in Mississippi

    USGS Publications Warehouse

    Pearse, Aaron T.; Kaminski, Richard M.; Reinecke, Kenneth J.; Dinsmore, Stephen J.

    2012-01-01

    Landscape features influence distribution of waterbirds throughout their annual cycle. A conceptual model, the wetland habitat complex, may be useful in conservation of wetland habitats for dabbling ducks (Anatini). The foundation of this conceptual model is that ducks seek complexes of wetlands containing diverse resources to meet dynamic physiological needs. We included flooded croplands, wetlands and ponds, public-land waterfowl sanctuary, and diversity of habitats as key components of wetland habitat complexes and compared their relative influence at two spatial scales (i.e., local, 0.25-km radius; landscape, 4-km) on dabbling ducks wintering in western Mississippi, USA during winters 2002–2004. Distribution of mallard (Anas platyrhynchos) groups was positively associated with flooded cropland at local and landscape scales. Models representing flooded croplands at the landscape scale best explained occurrence of other dabbling ducks. Habitat complexity measured at both scales best explained group size of other dabbling ducks. Flooded croplands likely provided food that had decreased in availability due to conversion of wetlands to agriculture. Wetland complexes at landscape scales were more attractive to wintering ducks than single or structurally simple wetlands. Conservation of wetland complexes at large spatial scales (≥5,000 ha) on public and private lands will require coordination among multiple stakeholders.

  5. Multiple Scale Analysis of the Dynamic State Index (DSI)

    NASA Astrophysics Data System (ADS)

    Müller, A.; Névir, P.

    2016-12-01

    The Dynamic State Index (DSI) is a novel parameter that indicates local deviations of the atmospheric flow field from a stationary, inviscid and adiabatic solution of the primitive equations of fluid mechanics. This is in contrast to classical methods, which often diagnose deviations from temporal or spatial mean states. We show some applications of the DSI to atmospheric flow phenomena on different scales. The DSI is derived from the Energy-Vorticity-Theory (EVT) which is based on two global conserved quantities, the total energy and Ertel's potential enstrophy. Locally, these global quantities lead to the Bernoulli function and the PV building together with the potential temperature the DSI.If the Bernoulli function and the PV are balanced, the DSI vanishes and the basic state is obtained. Deviations from the basic state provide an indication of diabatic and non-stationary weather events. Therefore, the DSI offers a tool to diagnose and even prognose different atmospheric events on different scales.On synoptic scale, the DSI can help to diagnose storms and hurricanes, where also the dipole structure of the DSI plays an important role. In the scope of the collaborative research center "Scaling Cascades in Complex Systems" we show high correlations between the DSI and precipitation on convective scale. Moreover, we compare the results with reduced models and different spatial resolutions.

  6. Optimized spatial priorities for biodiversity conservation in China: a systematic conservation planning perspective.

    PubMed

    Wu, Ruidong; Long, Yongcheng; Malanson, George P; Garber, Paul A; Zhang, Shuang; Li, Diqiang; Zhao, Peng; Wang, Longzhu; Duo, Hairui

    2014-01-01

    By addressing several key features overlooked in previous studies, i.e. human disturbance, integration of ecosystem- and species-level conservation features, and principles of complementarity and representativeness, we present the first national-scale systematic conservation planning for China to determine the optimized spatial priorities for biodiversity conservation. We compiled a spatial database on the distributions of ecosystem- and species-level conservation features, and modeled a human disturbance index (HDI) by aggregating information using several socioeconomic proxies. We ran Marxan with two scenarios (HDI-ignored and HDI-considered) to investigate the effects of human disturbance, and explored the geographic patterns of the optimized spatial conservation priorities. Compared to when HDI was ignored, the HDI-considered scenario resulted in (1) a marked reduction (∼9%) in the total HDI score and a slight increase (∼7%) in the total area of the portfolio of priority units, (2) a significant increase (∼43%) in the total irreplaceable area and (3) more irreplaceable units being identified in almost all environmental zones and highly-disturbed provinces. Thus the inclusion of human disturbance is essential for cost-effective priority-setting. Attention should be targeted to the areas that are characterized as moderately-disturbed, <2,000 m in altitude, and/or intermediately- to extremely-rugged in terrain to identify potentially important regions for implementing cost-effective conservation. We delineated 23 primary large-scale priority areas that are significant for conserving China's biodiversity, but those isolated priority units in disturbed regions are in more urgent need of conservation actions so as to prevent immediate and severe biodiversity loss. This study presents a spatially optimized national-scale portfolio of conservation priorities--effectively representing the overall biodiversity of China while minimizing conflicts with economic development. Our results offer critical insights for current conservation and strategic land-use planning in China. The approach is transferable and easy to implement by end-users, and applicable for national- and local-scale systematic conservation prioritization practices.

  7. CMIP5 ensemble-based spatial rainfall projection over homogeneous zones of India

    NASA Astrophysics Data System (ADS)

    Akhter, Javed; Das, Lalu; Deb, Argha

    2017-09-01

    Performances of the state-of-the-art CMIP5 models in reproducing the spatial rainfall patterns over seven homogeneous rainfall zones of India viz. North Mountainous India (NMI), Northwest India (NWI), North Central India (NCI), Northeast India (NEI), West Peninsular India (WPI), East Peninsular India (EPI) and South Peninsular India (SPI) have been assessed using different conventional performance metrics namely spatial correlation (R), index of agreement (d-index), Nash-Sutcliffe efficiency (NSE), Ratio of RMSE to the standard deviation of the observations (RSR) and mean bias (MB). The results based on these indices revealed that majority of the models are unable to reproduce finer-scaled spatial patterns over most of the zones. Thereafter, four bias correction methods i.e. Scaling, Standardized Reconstruction, Empirical Quantile Mapping and Gamma Quantile Mapping have been applied on GCM simulations to enhance the skills of the GCM projections. It has been found that scaling method compared to other three methods shown its better skill in capturing mean spatial patterns. Multi-model ensemble (MME) comprising 25 numbers of better performing bias corrected (Scaled) GCMs, have been considered for developing future rainfall patterns over seven zones. Models' spread from ensemble mean (uncertainty) has been found to be larger in RCP 8.5 than RCP4.5 ensemble. In general, future rainfall projections from RCP 4.5 and RCP 8.5 revealed an increasing rainfall over seven zones during 2020s, 2050s, and 2080s. The maximum increase has been found over southwestern part of NWI (12-30%), northwestern part of WPI (3-30%), southeastern part of NEI (5-18%) and northern and eastern part of SPI (6-24%). However, the contiguous region comprising by the southeastern part of NCI and northeastern part of EPI, may experience slight decreasing rainfall (about 3%) during 2020s whereas the western part of NMI may also receive around 3% reduction in rainfall during both 2050s and 2080s.

  8. Modeling fluid injection induced microseismicity in shales

    NASA Astrophysics Data System (ADS)

    Carcione, José M.; Currenti, Gilda; Johann, Lisa; Shapiro, Serge

    2018-02-01

    Hydraulic fracturing in shales generates a cloud of seismic—tensile and shear—events that can be used to evaluate the extent of the fracturing (event clouds) and obtain the hydraulic properties of the medium, such as the degree of anisotropy and the permeability. Firstly, we investigate the suitability of novel semi-analytical reference solutions for pore pressure evolution around a well after fluid injection in anisotropic media. To do so, we use cylindrical coordinates in the presence of a formation (a layer) and spherical coordinates for a homogeneous and unbounded medium. The involved differential equations are transformed to an isotropic diffusion equation by means of pseudo-spatial coordinates obtained from the spatial variables re-scaled by the permeability components. We consider pressure-dependent permeability components, which are independent of the spatial direction. The analytical solutions are compared to numerical solutions to verify their applicability. The comparison shows that the solutions are suitable for a limited permeability range and moderate to minor pressure dependences of the permeability. Once the pressure evolution around the well has been established, we can model the microseismic events. Induced seismicity by failure due to fluid injection in a porous rock depends on the properties of the hydraulic and elastic medium and in situ stress conditions. Here, we define a tensile threshold pressure above which there is tensile emission, while the shear threshold is obtained by using the octahedral stress criterion and the in situ rock properties and conditions. Subsequently, we generate event clouds for both cases and study the spatio-temporal features. The model considers anisotropic permeability and the results are spatially re-scaled to obtain an effective isotropic medium representation. For a 3D diffusion in spherical coordinates and exponential pressure dependence of the permeability, the results differ from those of the classical diffusion equation. Use of the classical front to fit cloud events spatially, provides good results but with a re-scaled value of these components. Modeling is required to evaluate the scaling constant in real cases.

  9. Scaling issues in local productivity hotspots in marine ecosystems using remote sensing data: A case study in the Gulf of Maine

    NASA Astrophysics Data System (ADS)

    Ribera, M.; Gopal, S.

    2014-12-01

    Productivity hotspots are traditionally defined as concentrations of relatively high biomass compared to global reference values. These hotspots often signal atypical processes occurring in a location, and identifying them is a great first step at understanding the complexity inherent in the system. However, identifying local hotspots can be difficult when an overarching global pattern (i.e. spatial autocorrelation) already exists. This problem is particularly apparent in marine ecosystems because values of productivity in near-shore areas are consistently higher than those of the open ocean due to oceanographic processes such as upwelling. In such cases, if the global reference layer used to detect hotspots is too wide, hotspots may be only identified near the coast while missing known concentrations of organisms in offshore waters. On the other hand, if the global reference layer is too small, every single location may be considered a hotspot. We applied spatial and traditional statistics to remote sensing data to determine the optimal reference global spatial scale for identifying marine productivity hotspots in the Gulf of Maine. Our iterative process measured Getis and Ord's local G* statistic at different global scales until the variance of each hotspot was maximized. We tested this process with different full resolution MERIS chlorophyll layers (300m spatial resolution) for the whole Gulf of Maine. We concluded that the optimal global scale depends on the time of the year the remote sensing data was collected, particularly when coinciding with known seasonal phytoplankton blooms. The hotspots found through this process were also spatially heterogeneous in size, with bigger hotspots in areas offshore than in locations inshore. These results may be instructive for both managers and fisheries researchers as they adapt their fisheries management policies and methods to an ecosystem based approach (EBM).

  10. Optimized Spatial Priorities for Biodiversity Conservation in China: A Systematic Conservation Planning Perspective

    PubMed Central

    Wu, Ruidong; Long, Yongcheng; Malanson, George P.; Garber, Paul A.; Zhang, Shuang; Li, Diqiang; Zhao, Peng; Wang, Longzhu; Duo, Hairui

    2014-01-01

    By addressing several key features overlooked in previous studies, i.e. human disturbance, integration of ecosystem- and species-level conservation features, and principles of complementarity and representativeness, we present the first national-scale systematic conservation planning for China to determine the optimized spatial priorities for biodiversity conservation. We compiled a spatial database on the distributions of ecosystem- and species-level conservation features, and modeled a human disturbance index (HDI) by aggregating information using several socioeconomic proxies. We ran Marxan with two scenarios (HDI-ignored and HDI-considered) to investigate the effects of human disturbance, and explored the geographic patterns of the optimized spatial conservation priorities. Compared to when HDI was ignored, the HDI-considered scenario resulted in (1) a marked reduction (∼9%) in the total HDI score and a slight increase (∼7%) in the total area of the portfolio of priority units, (2) a significant increase (∼43%) in the total irreplaceable area and (3) more irreplaceable units being identified in almost all environmental zones and highly-disturbed provinces. Thus the inclusion of human disturbance is essential for cost-effective priority-setting. Attention should be targeted to the areas that are characterized as moderately-disturbed, <2,000 m in altitude, and/or intermediately- to extremely-rugged in terrain to identify potentially important regions for implementing cost-effective conservation. We delineated 23 primary large-scale priority areas that are significant for conserving China's biodiversity, but those isolated priority units in disturbed regions are in more urgent need of conservation actions so as to prevent immediate and severe biodiversity loss. This study presents a spatially optimized national-scale portfolio of conservation priorities – effectively representing the overall biodiversity of China while minimizing conflicts with economic development. Our results offer critical insights for current conservation and strategic land-use planning in China. The approach is transferable and easy to implement by end-users, and applicable for national- and local-scale systematic conservation prioritization practices. PMID:25072933

  11. Determining the soil hydraulic conductivity by means of a field scale internal drainage

    NASA Astrophysics Data System (ADS)

    Severino, Gerardo; Santini, Alessandro; Sommella, Angelo

    2003-03-01

    Spatial variations of water content in large extents soils (vadose zone) are highly affected by the natural heterogeneity of the porous medium. This implies that the magnitude of the hydraulic properties, especially the conductivity, varies in an irregular manner with scale. Determining mean values of hydraulic properties will not suffice to accurately quantify water flow in the vadose zone. At field scale proper field measurements have to be carried out, similar to standard laboratory methods that also characterize the spatial variability of the hydraulic properties. Toward this aim an internal drainage test has been conducted at Ponticelli site near Naples (Italy) where water content and pressure head were monitored at 50 locations of a 2×50 m 2 plot. The present paper illustrates a method to quantify the mean value and the spatial variability of the hydraulic parameters needed to calibrate the soil conductivity curve at field scale (hereafter defined as field scale hydraulic conductivity). A stochastic model that regards the hydraulic parameters as random space functions (RSFs) is derived by adopting the stream tube approach of Dagan and Bresler (1979). Owing to the randomness of the hydraulic parameters, even the water content θ will be a RSF whose mean value (hereafter termed field scale water content) is obtained as an ensemble average over all the realizations of a local analytical solution of Richards' equation. It is shown that the most frequent data collection should be carried out in the initial stage of the internal drainage experiment, when the most significant changes in water content occur. The model parameters are obtained by a standard least square optimization procedure using water content data at a certain depth (z=30 cm) for several times ( t=5, 24, 48, 96, 144, 216, 312, 408, 576, 744, 912 h). The reliability of the proposed method is then evaluated by comparing the predicted water content with observations at different depths ( z=45, 60, 75, and 90 cm). The calibration procedure is further verified by comparing the cumulative distribution of measured water content at different times with corresponding distribution obtained from the calibrated model.

  12. Estimation of forest aboveground biomass and uncertainties by integration of field measurements, airborne LiDAR, and SAR and optical satellite data in Mexico.

    PubMed

    Urbazaev, Mikhail; Thiel, Christian; Cremer, Felix; Dubayah, Ralph; Migliavacca, Mirco; Reichstein, Markus; Schmullius, Christiane

    2018-02-21

    Information on the spatial distribution of aboveground biomass (AGB) over large areas is needed for understanding and managing processes involved in the carbon cycle and supporting international policies for climate change mitigation and adaption. Furthermore, these products provide important baseline data for the development of sustainable management strategies to local stakeholders. The use of remote sensing data can provide spatially explicit information of AGB from local to global scales. In this study, we mapped national Mexican forest AGB using satellite remote sensing data and a machine learning approach. We modelled AGB using two scenarios: (1) extensive national forest inventory (NFI), and (2) airborne Light Detection and Ranging (LiDAR) as reference data. Finally, we propagated uncertainties from field measurements to LiDAR-derived AGB and to the national wall-to-wall forest AGB map. The estimated AGB maps (NFI- and LiDAR-calibrated) showed similar goodness-of-fit statistics (R 2 , Root Mean Square Error (RMSE)) at three different scales compared to the independent validation data set. We observed different spatial patterns of AGB in tropical dense forests, where no or limited number of NFI data were available, with higher AGB values in the LiDAR-calibrated map. We estimated much higher uncertainties in the AGB maps based on two-stage up-scaling method (i.e., from field measurements to LiDAR and from LiDAR-based estimates to satellite imagery) compared to the traditional field to satellite up-scaling. By removing LiDAR-based AGB pixels with high uncertainties, it was possible to estimate national forest AGB with similar uncertainties as calibrated with NFI data only. Since LiDAR data can be acquired much faster and for much larger areas compared to field inventory data, LiDAR is attractive for repetitive large scale AGB mapping. In this study, we showed that two-stage up-scaling methods for AGB estimation over large areas need to be analyzed and validated with great care. The uncertainties in the LiDAR-estimated AGB propagate further in the wall-to-wall map and can be up to 150%. Thus, when a two-stage up-scaling method is applied, it is crucial to characterize the uncertainties at all stages in order to generate robust results. Considering the findings mentioned above LiDAR can be used as an extension to NFI for example for areas that are difficult or not possible to access.

  13. Large-Scale Partial-Duplicate Image Retrieval and Its Applications

    DTIC Science & Technology

    2016-04-23

    SECURITY CLASSIFICATION OF: The explosive growth of Internet Media (partial-duplicate/similar images, 3D objects, 3D models, etc.) sheds bright...light on many promising applications in forensics, surveillance, 3D animation, mobile visual search, and 3D model/object search. Compared with the...and stable spatial configuration. Compared with the general 2D objects, 3D models/objects consist of 3D data information (typically a list of

  14. Analysing taxonomic structures and local ecological processes in temperate forests in North Eastern China.

    PubMed

    Fan, Chunyu; Tan, Lingzhao; Zhang, Chunyu; Zhao, Xiuhai; von Gadow, Klaus

    2017-10-30

    One of the core issues of forest community ecology is the exploration of how ecological processes affect community structure. The relative importance of different processes is still under debate. This study addresses four questions: (1) how is the taxonomic structure of a forest community affected by spatial scale? (2) does the taxonomic structure reveal effects of local processes such as environmental filtering, dispersal limitation or interspecific competition at a local scale? (3) does the effect of local processes on the taxonomic structure vary with the spatial scale? (4) does the analysis based on taxonomic structures provide similar insights when compared with the use of phylogenetic information? Based on the data collected in two large forest observational field studies, the taxonomic structures of the plant communities were analyzed at different sampling scales using taxonomic ratios (number of genera/number of species, number of families/number of species), and the relationship between the number of higher taxa and the number of species. Two random null models were used and the "standardized effect size" (SES) of taxonomic ratios was calculated, to assess possible differences between the observed and simulated taxonomic structures, which may be caused by specific ecological processes. We further applied a phylogeny-based method to compare results with those of the taxonomic approach. As expected, the taxonomic ratios decline with increasing grain size. The quantitative relationship between genera/families and species, described by a linearized power function, showed a good fit. With the exception of the family-species relationship in the Jiaohe study area, the exponents of the genus/family-species relationships did not show any scale dependent effects. The taxonomic ratios of the observed communities had significantly lower values than those of the simulated random community under the test of two null models at almost all scales. Null Model 2 which considered the spatial dispersion of species generated a taxonomic structure which proved to be more consistent with that in the observed community. As sampling sizes increased from 20 m × 20 m to 50 m × 50 m, the magnitudes of SESs of taxonomic ratios increased. Based on the phylogenetic analysis, we found that the Jiaohe plot was phylogenetically clustered at almost all scales. We detected significant phylogenetically overdispersion at the 20 m × 20 m and 30 m × 30 m scales in the Liangshui plot. The results suggest that the effect of abiotic filtering is greater than the effects of interspecific competition in shaping the local community at almost all scales. Local processes influence the taxonomic structures, but their combined effects vary with the spatial scale. The taxonomic approach provides similar insights as the phylogenetic approach, especially when we applied a more conservative null model. Analysing taxonomic structure may be a useful tool for communities where well-resolved phylogenetic data are not available.

  15. Comparing approaches to spatially explicit ecosystem service modeling: a case study from the San Pedro River, Arizona

    USGS Publications Warehouse

    Bagstad, Kenneth J.; Semmens, Darius J.; Winthrop, Robert

    2013-01-01

    Although the number of ecosystem service modeling tools has grown in recent years, quantitative comparative studies of these tools have been lacking. In this study, we applied two leading open-source, spatially explicit ecosystem services modeling tools – Artificial Intelligence for Ecosystem Services (ARIES) and Integrated Valuation of Ecosystem Services and Tradeoffs (InVEST) – to the San Pedro River watershed in southeast Arizona, USA, and northern Sonora, Mexico. We modeled locally important services that both modeling systems could address – carbon, water, and scenic viewsheds. We then applied managerially relevant scenarios for urban growth and mesquite management to quantify ecosystem service changes. InVEST and ARIES use different modeling approaches and ecosystem services metrics; for carbon, metrics were more similar and results were more easily comparable than for viewsheds or water. However, findings demonstrate similar gains and losses of ecosystem services and conclusions when comparing effects across our scenarios. Results were more closely aligned for landscape-scale urban-growth scenarios and more divergent for a site-scale mesquite-management scenario. Follow-up studies, including testing in different geographic contexts, can improve our understanding of the strengths and weaknesses of these and other ecosystem services modeling tools as they move closer to readiness for supporting day-to-day resource management.

  16. Estimation of the Relationship Between Remotely Sensed Anthropogenic Heat Discharge and Building Energy Use

    NASA Technical Reports Server (NTRS)

    Zhou, Yuyu; Weng, Qihao; Gurney, Kevin R.; Shuai, Yanmin; Hu, Xuefei

    2012-01-01

    This paper examined the relationship between remotely sensed anthropogenic heat discharge and energy use from residential and commercial buildings across multiple scales in the city of Indianapolis, Indiana, USA. The anthropogenic heat discharge was estimated with a remote sensing-based surface energy balance model, which was parameterized using land cover, land surface temperature, albedo, and meteorological data. The building energy use was estimated using a GIS-based building energy simulation model in conjunction with Department of Energy/Energy Information Administration survey data, the Assessor's parcel data, GIS floor areas data, and remote sensing-derived building height data. The spatial patterns of anthropogenic heat discharge and energy use from residential and commercial buildings were analyzed and compared. Quantitative relationships were evaluated across multiple scales from pixel aggregation to census block. The results indicate that anthropogenic heat discharge is consistent with building energy use in terms of the spatial pattern, and that building energy use accounts for a significant fraction of anthropogenic heat discharge. The research also implies that the relationship between anthropogenic heat discharge and building energy use is scale-dependent. The simultaneous estimation of anthropogenic heat discharge and building energy use via two independent methods improves the understanding of the surface energy balance in an urban landscape. The anthropogenic heat discharge derived from remote sensing and meteorological data may be able to serve as a spatial distribution proxy for spatially-resolved building energy use, and even for fossil-fuel CO2 emissions if additional factors are considered.

  17. Cloud transitions: comparison of temporal variation in the southeastern Pacific with the spatial variation in the northeastern Pacific at low latitudes

    DOE PAGES

    Yu, Haiyang; Zhang, Minghua; Lin, Wuyin; ...

    2016-10-14

    The seasonal variation of clouds in the southeastern equatorial Pacific (SEP) is analysed and compared with the spatial variation of clouds in the northeastern Pacific along the Global Energy and Water Cycle Experiment Cloud System Study/Working Group on Numerical Experimentation (GCSS/WGNE) Pacific Cross-Section Intercomparison (GPCI) transect. A ‘seasonal cloud transition’ – from stratocumulus to shallow cumulus and eventually to deep convection – is found in the SEP from September to April, which is similar to the spatial cloud transition along the GPCI transect from the California coast to the equator. It is shown that this seasonal cloud transition in themore » SEP is associated with increasing sea surface temperature (SST), decreasing lower tropospheric stability and large-scale subsidence, which are all similar to the spatial variation of these fields along the GPCI transect. There was a difference found such that the SEP cloud transition is associated with decreasing surface wind speed and surface latent heat flux, weaker larger-scale upward motion and convective instability, which lead to less deepening of the low clouds and less frequent deep convection than those in the GPCI transect. Finally, the seasonal cloud transition in the SEP provides a test for climate models to simulate the relationships between clouds and large-scale atmospheric fields in a region that features a spurious double inter-tropical convergence zone (ITCZ) in most models.« less

  18. The Impact of Spatial and Temporal Resolutions in Tropical Summer Rainfall Distribution: Preliminary Results

    NASA Astrophysics Data System (ADS)

    Liu, Q.; Chiu, L. S.; Hao, X.

    2017-10-01

    The abundance or lack of rainfall affects peoples' life and activities. As a major component of the global hydrological cycle (Chokngamwong & Chiu, 2007), accurate representations at various spatial and temporal scales are crucial for a lot of decision making processes. Climate models show a warmer and wetter climate due to increases of Greenhouse Gases (GHG). However, the models' resolutions are often too coarse to be directly applicable to local scales that are useful for mitigation purposes. Hence disaggregation (downscaling) procedures are needed to transfer the coarse scale products to higher spatial and temporal resolutions. The aim of this paper is to examine the changes in the statistical parameters of rainfall at various spatial and temporal resolutions. The TRMM Multi-satellite Precipitation Analysis (TMPA) at 0.25 degree, 3 hourly grid rainfall data for a summer is aggregated to 0.5,1.0, 2.0 and 2.5 degree and at 6, 12, 24 hourly, pentad (five days) and monthly resolutions. The probability distributions (PDF) and cumulative distribution functions(CDF) of rain amount at these resolutions are computed and modeled as a mixed distribution. Parameters of the PDFs are compared using the Kolmogrov-Smironov (KS) test, both for the mixed and the marginal distribution. These distributions are shown to be distinct. The marginal distributions are fitted with Lognormal and Gamma distributions and it is found that the Gamma distributions fit much better than the Lognormal.

  19. Cloud transitions: comparison of temporal variation in the southeastern Pacific with the spatial variation in the northeastern Pacific at low latitudes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yu, Haiyang; Zhang, Minghua; Lin, Wuyin

    The seasonal variation of clouds in the southeastern equatorial Pacific (SEP) is analysed and compared with the spatial variation of clouds in the northeastern Pacific along the Global Energy and Water Cycle Experiment Cloud System Study/Working Group on Numerical Experimentation (GCSS/WGNE) Pacific Cross-Section Intercomparison (GPCI) transect. A ‘seasonal cloud transition’ – from stratocumulus to shallow cumulus and eventually to deep convection – is found in the SEP from September to April, which is similar to the spatial cloud transition along the GPCI transect from the California coast to the equator. It is shown that this seasonal cloud transition in themore » SEP is associated with increasing sea surface temperature (SST), decreasing lower tropospheric stability and large-scale subsidence, which are all similar to the spatial variation of these fields along the GPCI transect. There was a difference found such that the SEP cloud transition is associated with decreasing surface wind speed and surface latent heat flux, weaker larger-scale upward motion and convective instability, which lead to less deepening of the low clouds and less frequent deep convection than those in the GPCI transect. Finally, the seasonal cloud transition in the SEP provides a test for climate models to simulate the relationships between clouds and large-scale atmospheric fields in a region that features a spurious double inter-tropical convergence zone (ITCZ) in most models.« less

  20. Detecting natural occlusion boundaries using local cues

    PubMed Central

    DiMattina, Christopher; Fox, Sean A.; Lewicki, Michael S.

    2012-01-01

    Occlusion boundaries and junctions provide important cues for inferring three-dimensional scene organization from two-dimensional images. Although several investigators in machine vision have developed algorithms for detecting occlusions and other edges in natural images, relatively few psychophysics or neurophysiology studies have investigated what features are used by the visual system to detect natural occlusions. In this study, we addressed this question using a psychophysical experiment where subjects discriminated image patches containing occlusions from patches containing surfaces. Image patches were drawn from a novel occlusion database containing labeled occlusion boundaries and textured surfaces in a variety of natural scenes. Consistent with related previous work, we found that relatively large image patches were needed to attain reliable performance, suggesting that human subjects integrate complex information over a large spatial region to detect natural occlusions. By defining machine observers using a set of previously studied features measured from natural occlusions and surfaces, we demonstrate that simple features defined at the spatial scale of the image patch are insufficient to account for human performance in the task. To define machine observers using a more biologically plausible multiscale feature set, we trained standard linear and neural network classifiers on the rectified outputs of a Gabor filter bank applied to the image patches. We found that simple linear classifiers could not match human performance, while a neural network classifier combining filter information across location and spatial scale compared well. These results demonstrate the importance of combining a variety of cues defined at multiple spatial scales for detecting natural occlusions. PMID:23255731

  1. Scintillometer networks for calibration and validation of energy balance and soil moisture remote sensing algorithms

    NASA Astrophysics Data System (ADS)

    Hendrickx, Jan M. H.; Kleissl, Jan; Gómez Vélez, Jesús D.; Hong, Sung-ho; Fábrega Duque, José R.; Vega, David; Moreno Ramírez, Hernán A.; Ogden, Fred L.

    2007-04-01

    Accurate estimation of sensible and latent heat fluxes as well as soil moisture from remotely sensed satellite images poses a great challenge. Yet, it is critical to face this challenge since the estimation of spatial and temporal distributions of these parameters over large areas is impossible using only ground measurements. A major difficulty for the calibration and validation of operational remote sensing methods such as SEBAL, METRIC, and ALEXI is the ground measurement of sensible heat fluxes at a scale similar to the spatial resolution of the remote sensing image. While the spatial length scale of remote sensing images covers a range from 30 m (LandSat) to 1000 m (MODIS) direct methods to measure sensible heat fluxes such as eddy covariance (EC) only provide point measurements at a scale that may be considerably smaller than the estimate obtained from a remote sensing method. The Large Aperture scintillometer (LAS) flux footprint area is larger (up to 5000 m long) and its spatial extent better constraint than that of EC systems. Therefore, scintillometers offer the unique possibility of measuring the vertical flux of sensible heat averaged over areas comparable with several pixels of a satellite image (up to about 40 Landsat thermal pixels or about 5 MODIS thermal pixels). The objective of this paper is to present our experiences with an existing network of seven scintillometers in New Mexico and a planned network of three scintillometers in the humid tropics of Panama and Colombia.

  2. Spatially explicit and stochastic simulation of forest landscape fire disturbance and succession

    Treesearch

    Hong S. He; David J. Mladenoff

    1999-01-01

    Understanding disturbance and recovery of forest landscapes is a challenge because of complex interactions over a range of temporal and spatial scales. Landscape simulation models offer an approach to studying such systems at broad scales. Fire can be simulated spatially using mechanistic or stochastic approaches. We describe the fire module in a spatially explicit,...

  3. Spatial scaling of non-native fish richness across the United States

    Treesearch

    Qinfeng Guo; Julian D. Olden

    2014-01-01

    A major goal and challenge of invasion ecology is to describe and interpret spatial and temporal patterns of species invasions. Here, we examined fish invasion patterns at four spatially structured and hierarchically nested scales across the contiguous United States (i.e., from large to small: region, basin, watershed, and sub-watershed). All spatial relationships in...

  4. Monitoring hillslope moisture dynamics with surface ERT for enhancing spatial significance of hydrometric point measurements

    NASA Astrophysics Data System (ADS)

    Hübner, R.; Heller, K.; Günther, T.; Kleber, A.

    2015-01-01

    Besides floodplains, hillslopes are basic units that mainly control water movement and flow pathways within catchments of subdued mountain ranges. The structure of their shallow subsurface affects water balance, e.g. infiltration, retention, and runoff. Nevertheless, there is still a gap in the knowledge of the hydrological dynamics on hillslopes, notably due to the lack of generalization and transferability. This study presents a robust multi-method framework of electrical resistivity tomography (ERT) in addition to hydrometric point measurements, transferring hydrometric data into higher spatial scales to obtain additional patterns of distribution and dynamics of soil moisture on a hillslope. A geoelectrical monitoring in a small catchment in the eastern Ore Mountains was carried out at weekly intervals from May to December 2008 to image seasonal moisture dynamics on the hillslope scale. To link water content and electrical resistivity, the parameters of Archie's law were determined using different core samples. To optimize inversion parameters and methods, the derived spatial and temporal water content distribution was compared to tensiometer data. The results from ERT measurements show a strong correlation with the hydrometric data. The response is congruent to the soil tension data. Water content calculated from the ERT profile shows similar variations as that of water content from soil moisture sensors. Consequently, soil moisture dynamics on the hillslope scale may be determined not only by expensive invasive punctual hydrometric measurements, but also by minimally invasive time-lapse ERT, provided that pedo-/petrophysical relationships are known. Since ERT integrates larger spatial scales, a combination with hydrometric point measurements improves the understanding of the ongoing hydrological processes and better suits identification of heterogeneities.

  5. Rainfall Observed Over Bangladesh 2000-2008: A Comparison of Spatial Interpolation Methods

    NASA Astrophysics Data System (ADS)

    Pervez, M.; Henebry, G. M.

    2010-12-01

    In preparation for a hydrometeorological study of freshwater resources in the greater Ganges-Brahmaputra region, we compared the results of four methods of spatial interpolation applied to point measurements of daily rainfall over Bangladesh during a seven year period (2000-2008). Two univariate (inverse distance weighted and spline-regularized and tension) and two multivariate geostatistical (ordinary kriging and kriging with external drift) methods were used to interpolate daily observations from a network of 221 rain gauges across Bangladesh spanning an area of 143,000 sq km. Elevation and topographic index were used as the covariates in the geostatistical methods. The validity of the interpolated maps was analyzed through cross-validation. The quality of the methods was assessed through the Pearson and Spearman correlations and root mean square error measurements of accuracy in cross-validation. Preliminary results indicated that the univariate methods performed better than the geostatistical methods at daily scales, likely due to the relatively dense sampled point measurements and a weak correlation between the rainfall and covariates at daily scales in this region. Inverse distance weighted produced the better results than the spline. For the days with extreme or high rainfall—spatially and quantitatively—the correlation between observed and interpolated estimates appeared to be high (r2 ~ 0.6 RMSE ~ 10mm), although for low rainfall days the correlations were poor (r2 ~ 0.1 RMSE ~ 3mm). The performance quality of these methods was influenced by the density of the sample point measurements, the quantity of the observed rainfall along with spatial extent, and an appropriate search radius defining the neighboring points. Results indicated that interpolated rainfall estimates at daily scales may introduce uncertainties in the successive hydrometeorological analysis. Interpolations at 5-day, 10-day, 15-day, and monthly time scales are currently under investigation.

  6. How and Why Does Stream Water Temperature Vary at Small Spatial Scales in a Headwater Stream?

    NASA Astrophysics Data System (ADS)

    Morgan, J. C.; Gannon, J. P.; Kelleher, C.

    2017-12-01

    The temperature of stream water is controlled by climatic variables, runoff/baseflow generation, and hyporheic exchange. Hydrologic conditions such as gaining/losing reaches and sources of inflow can vary dramatically along a stream on a small spatial scale. In this work, we attempt to discern the extent that the factors of air temperature, groundwater inflow, and precipitation influence stream temperature at small spatial scales along the length of a stream. To address this question, we measured stream temperature along the perennial stream network in a 43 ha catchment with a complex land use history in Cullowhee, NC. Two water temperature sensors were placed along the stream network on opposite sides of the stream at 100-meter intervals and at several locations of interest (i.e. stream junctions). The forty total sensors recorded the temperature every 10 minutes for one month in the spring and one month in the summer. A subset of sampling locations where stream temperature was consistent or varied from one side of the stream to the other were explored with a thermal imaging camera to obtain a more detailed representation of the spatial variation in temperature at those sites. These thermal surveys were compared with descriptions of the contributing area at the sample sites in an effort to discern specific causes of differing flow paths. Preliminary results suggest that on some branches of the stream stormflow has less influence than regular hyporheic exchange, while other tributaries can change dramatically with stormflow conditions. We anticipate this work will lead to a better understanding of temperature patterns in stream water networks. A better understanding of the importance of small-scale differences in flow paths to water temperature may be able to inform watershed management decisions in the future.

  7. Structure from Motion vs. the Kinect: Comparisons of River Field Measurements at the 10-2 to 102 meter Scales

    NASA Astrophysics Data System (ADS)

    Fonstad, M. A.; Dietrich, J. T.

    2014-12-01

    At the very smallest spatial scales of fluvial field analysis, measurements made historically in situ are often now supplemented, or even replaced by, remote sensing methods. This is particularly true in the case of topographic and particle size measurement. In the field, the scales of in situ observation usually range from millimeters up to hundreds of meters. Two recent approaches for remote mapping of river environments at the scales of historical in situ observations are (1) camera-based structure from motion (SfM), and (2) active patterned-light measurement with devices such as the Kinect. Even if only carried by hand, these two approaches can produce topographic datasets over three to four orders of magnitude of spatial scale. Which approach is most useful? Previous studies have demonstrated that both SfM and the Kinect are precise and accurate over in situ field measurement scales; we instead turn to alternate comparative metrics to help determine which tools might be best for our river measurement tasks. These metrics might include (1) the ease of field use, (2) which general environments are or are not amenable to measurement, (3) robustness to changing environmental conditions, (4) ease of data processing, and (5) cost. We test these metrics in a variety of bar-scale fluvial field environments, including a large-river cobble bar, a sand-bedded river point bar, and a complex mountain stream bar. The structure from motion approach is field-equipment inexpensive, is viable over a wide range of environmental conditions, and is highly spatially scalable. The approach requires some type of spatial referencing to make the data useful. The Kinect has the advantages of an almost real-time display of collected data, so problems can be detected quickly, being fast and easy to use, and the data are collected with arbitrary but metric coordinates, so absolute referencing isn't needed to use the data for many problems. It has the disadvantages of its light field generally being unable to penetrate water surfaces, becoming unusable in strong sunlight, and providing so much data as to be sometimes unwieldy in the data processing stage.

  8. Repeated measures from FIA data facilitates analysis across spatial scales of tree growth responses to nitrogen deposition from individual trees to whole ecoregions

    Treesearch

    Charles H. (Hobie) Perry; Kevin J. Horn; R. Quinn Thomas; Linda H. Pardo; Erica A.H. Smithwick; Doug Baldwin; Gregory B. Lawrence; Scott W. Bailey; Sabine Braun; Christopher M. Clark; Mark Fenn; Annika Nordin; Jennifer N. Phelan; Paul G. Schaberg; Sam St. Clair; Richard Warby; Shaun Watmough; Steven S. Perakis

    2015-01-01

    The abundance of temporally and spatially consistent Forest Inventory and Analysis data facilitates hierarchical/multilevel analysis to investigate factors affecting tree growth, scaling from plot-level to continental scales. Herein we use FIA tree and soil inventories in conjunction with various spatial climate and soils data to estimate species-specific responses of...

  9. Analysis of Large Scale Spatial Variability of Soil Moisture Using a Geostatistical Method

    DTIC Science & Technology

    2010-01-25

    2010 / Accepted: 19 January 2010 / Published: 25 January 2010 Abstract: Spatial and temporal soil moisture dynamics are critically needed to...scale observed and simulated estimates of soil moisture under pre- and post-precipitation event conditions. This large scale variability is a crucial... dynamics is essential in the hydrological and meteorological modeling, improves our understanding of land surface–atmosphere interactions. Spatial and

  10. Dendritic GIRK Channels Gate the Integration Window, Plateau Potentials, and Induction of Synaptic Plasticity in Dorsal But Not Ventral CA1 Neurons

    PubMed Central

    2017-01-01

    Studies comparing neuronal activity at the dorsal and ventral poles of the hippocampus have shown that the scale of spatial information increases and the precision with which space is represented declines from the dorsal to ventral end. These dorsoventral differences in neuronal output and spatial representation could arise due to differences in computations performed by dorsal and ventral CA1 neurons. In this study, we tested this hypothesis by quantifying the differences in dendritic integration and synaptic plasticity between dorsal and ventral CA1 pyramidal neurons of rat hippocampus. Using a combination of somatic and dendritic patch-clamp recordings, we show that the threshold for LTP induction is higher in dorsal CA1 neurons and that a G-protein-coupled inward-rectifying potassium channel mediated regulation of dendritic plateau potentials and dendritic excitability underlies this gating. By contrast, similar regulation of LTP is absent in ventral CA1 neurons. Additionally, we show that generation of plateau potentials and LTP induction in dorsal CA1 neurons depends on the coincident activation of Schaffer collateral and temporoammonic inputs at the distal apical dendrites. The ventral CA1 dendrites, however, can generate plateau potentials in response to temporally dispersed excitatory inputs. Overall, our results highlight the dorsoventral differences in dendritic computation that could account for the dorsoventral differences in spatial representation. SIGNIFICANCE STATEMENT The dorsal and ventral parts of the hippocampus encode spatial information at very different scales. Whereas the place-specific firing fields are small and precise at the dorsal end of the hippocampus, neurons at the ventral end have comparatively larger place fields. Here, we show that the dorsal CA1 neurons have a higher threshold for LTP induction and require coincident timing of excitatory synaptic inputs for the generation of dendritic plateau potentials. By contrast, ventral CA1 neurons can integrate temporally dispersed inputs and have a lower threshold for LTP. Together, these dorsoventral differences in the threshold for LTP induction could account for the differences in scale of spatial representation at the dorsal and ventral ends of the hippocampus. PMID:28280255

  11. Dendritic GIRK Channels Gate the Integration Window, Plateau Potentials, and Induction of Synaptic Plasticity in Dorsal But Not Ventral CA1 Neurons.

    PubMed

    Malik, Ruchi; Johnston, Daniel

    2017-04-05

    Studies comparing neuronal activity at the dorsal and ventral poles of the hippocampus have shown that the scale of spatial information increases and the precision with which space is represented declines from the dorsal to ventral end. These dorsoventral differences in neuronal output and spatial representation could arise due to differences in computations performed by dorsal and ventral CA1 neurons. In this study, we tested this hypothesis by quantifying the differences in dendritic integration and synaptic plasticity between dorsal and ventral CA1 pyramidal neurons of rat hippocampus. Using a combination of somatic and dendritic patch-clamp recordings, we show that the threshold for LTP induction is higher in dorsal CA1 neurons and that a G-protein-coupled inward-rectifying potassium channel mediated regulation of dendritic plateau potentials and dendritic excitability underlies this gating. By contrast, similar regulation of LTP is absent in ventral CA1 neurons. Additionally, we show that generation of plateau potentials and LTP induction in dorsal CA1 neurons depends on the coincident activation of Schaffer collateral and temporoammonic inputs at the distal apical dendrites. The ventral CA1 dendrites, however, can generate plateau potentials in response to temporally dispersed excitatory inputs. Overall, our results highlight the dorsoventral differences in dendritic computation that could account for the dorsoventral differences in spatial representation. SIGNIFICANCE STATEMENT The dorsal and ventral parts of the hippocampus encode spatial information at very different scales. Whereas the place-specific firing fields are small and precise at the dorsal end of the hippocampus, neurons at the ventral end have comparatively larger place fields. Here, we show that the dorsal CA1 neurons have a higher threshold for LTP induction and require coincident timing of excitatory synaptic inputs for the generation of dendritic plateau potentials. By contrast, ventral CA1 neurons can integrate temporally dispersed inputs and have a lower threshold for LTP. Together, these dorsoventral differences in the threshold for LTP induction could account for the differences in scale of spatial representation at the dorsal and ventral ends of the hippocampus. Copyright © 2017 the authors 0270-6474/17/373940-16$15.00/0.

  12. Cosmic Ray Neutron Sensing in Complex Systems

    NASA Astrophysics Data System (ADS)

    Piussi, L. M.; Tomelleri, E.; Tonon, G.; Bertoldi, G.; Mejia Aguilar, A.; Monsorno, R.; Zebisch, M.

    2017-12-01

    Soil moisture is a key variable in environmental monitoring and modelling: being located at the soil-atmosphere boundary, it is a driving force for water, energy and carbon fluxes. Nevertheless its importance, soil moisture observations lack of long time-series at high acquisition frequency in spatial meso-scale resolutions: traditional measurements deliver either long time series with high measurement frequency at spatial point scale or large scale and low frequency acquisitions. The Cosmic Ray Neutron Sensing (CRNS) technique fills this gap because it supplies information from a footprint of 240m of diameter and 15 to 83 cm of depth at a temporal resolution varying between 15 minutes and 24 hours. In addition, being a passive sensing technique, it is non-invasive. For these reasons, CRNS is gaining more and more attention from the scientific community. Nevertheless, the application of this technique in complex systems is still an open issue: where different Hydrogen pools are present and where their distributions vary appreciably with space and time, the traditional calibration method shows some limits. In order to obtain a better understanding of the data and to compare them with remote sensing products and spatially distributed traditional measurements (i.e. Wireless Sensors Network), the complexity of the surrounding environment has to be taken into account. In the current work we assessed the effects of spatial-temporal variability of soil moisture within the footprint, in a steep, heterogeneous mountain grassland area. Measurement were performed with a Cosmic Ray Neutron Probe (CRNP) and a mobile Wireless Sensors Network. We performed an in-deep sensitivity analysis of the effects of varying distributions of soil moisture on the calibration of the CRNP and our preliminary results show how the footprint shape varies depending on these dynamics. The results are then compared with remote sensing data (Sentinel 1 and 2). The current work is an assessment of different calibration procedures and their effect on the measurement outcome. We found that the response of the CRNP follows quite well the punctual measurement performed by a TDR installed on the site, but discrepancies could be explained by using the Wireless Sensors Network to perform a spatially weighted calibration and to introduce temporal dynamics.

  13. Spatially extended hybrid methods: a review

    PubMed Central

    2018-01-01

    Many biological and physical systems exhibit behaviour at multiple spatial, temporal or population scales. Multiscale processes provide challenges when they are to be simulated using numerical techniques. While coarser methods such as partial differential equations are typically fast to simulate, they lack the individual-level detail that may be required in regions of low concentration or small spatial scale. However, to simulate at such an individual level throughout a domain and in regions where concentrations are high can be computationally expensive. Spatially coupled hybrid methods provide a bridge, allowing for multiple representations of the same species in one spatial domain by partitioning space into distinct modelling subdomains. Over the past 20 years, such hybrid methods have risen to prominence, leading to what is now a very active research area across multiple disciplines including chemistry, physics and mathematics. There are three main motivations for undertaking this review. Firstly, we have collated a large number of spatially extended hybrid methods and presented them in a single coherent document, while comparing and contrasting them, so that anyone who requires a multiscale hybrid method will be able to find the most appropriate one for their need. Secondly, we have provided canonical examples with algorithms and accompanying code, serving to demonstrate how these types of methods work in practice. Finally, we have presented papers that employ these methods on real biological and physical problems, demonstrating their utility. We also consider some open research questions in the area of hybrid method development and the future directions for the field. PMID:29491179

  14. Matching spatial property rights fisheries with scales of fish dispersal.

    PubMed

    White, Crow; Costello, Christopher

    2011-03-01

    Regulation of fisheries using spatial property rights can alleviate competition for high-value patches that hinders economic efficiency in quota-based, rights-based, and open-access management programs. However, efficiency gains erode when delineation of spatial rights constitutes incomplete ownership of the resource, thereby degrading its local value and promoting overexploitation. Incomplete ownership may be particularly prevalent in the spatial management of mobile fishery species. We developed a game-theoretic bioeconomic model of spatial property rights representing territorial user rights fisheries (TURF) management of nearshore marine fish and invertebrate species with mobile adult and larval life history stages. Strategic responses by fisheries in neighboring management units result in overexploitation of the stock and reduced yields for each fishery compared with those attainable without resource mobility or with coordination or sole control in fishing effort. High dispersal potential of the larval stage, a common trait among nearshore fishery species, coupled with scaling of management units to only capture adult mobility, a common characteristic of many nearshore TURF programs, in particular substantially reduced stock levels and yields. In a case study of hypothetical TURF programs of nearshore fish and invertebrate species, management units needed to be tens of kilometers in alongshore length to minimize larval export and generate reasonable returns to fisheries. Cooperation and quota regulations represent solutions to the problem that need to be quantified in cost and integrated into the determination of the acceptability of spatial property rights management of fisheries.

  15. Spatio-Temporal Evolution and Scaling Properties of Human Settlements (Invited)

    NASA Astrophysics Data System (ADS)

    Small, C.; Milesi, C.; Elvidge, C.; Baugh, K.; Henebry, G. M.; Nghiem, S. V.

    2013-12-01

    Growth and evolution of cities and smaller settlements is usually studied in the context of population and other socioeconomic variables. While this is logical in the sense that settlements are groups of humans engaged in socioeconomic processes, our means of collecting information about spatio-temporal distributions of population and socioeconomic variables often lack the spatial and temporal resolution to represent the processes at scales which they are known to occur. Furthermore, metrics and definitions often vary with country and through time. However, remote sensing provides globally consistent, synoptic observations of several proxies for human settlement at spatial and temporal resolutions sufficient to represent the evolution of settlements over the past 40 years. We use several independent but complementary proxies for anthropogenic land cover to quantify spatio-temporal (ST) evolution and scaling properties of human settlements globally. In this study we begin by comparing land cover and night lights in 8 diverse settings - each spanning gradients of population density and degree of land surface modification. Stable anthropogenic night light is derived from multi-temporal composites of emitted luminance measured by the VIIRS and DMSP-OLS sensors. Land cover is represented as mixtures of sub-pixel fractions of rock, soil and impervious Substrates, Vegetation and Dark surfaces (shadow, water and absorptive materials) estimated from Landsat imagery with > 94% accuracy. Multi-season stability and variability of land cover fractions effectively distinguishes between spectrally similar land covers that corrupt thematic classifications based on single images. We find that temporal stability of impervious substrates combined with persistent shadow cast between buildings results in temporally stable aggregate reflectance across seasons at the 30 m scale of a Landsat pixel. Comparison of night light brightness with land cover composition, stability and variability yields several consistent relationships that persist across a variety of settlement types and physical environments. We use the multiple threshold method of Small et al (2011) to represent a continuum of settlement density by segmenting both night light brightness and multi-season land cover characteristics. Rank-size distributions of spatially contiguous segments quantify scaling and connectivity of land cover. Spatial and temporal evolution of rank-size distributions is consistent with power laws as suggested by Zipf's Law for city size based on population. However, unlike Zipf's Law, the observed distributions persist to global scales in which the larger agglomerations are much larger than individual cities. The scaling relations observed extend from the scale of cities and smaller settlements up to vast spatial networks of interconnected settlements.

  16. Hierarchical Spatio-temporal Visual Analysis of Cluster Evolution in Electrocorticography Data

    DOE PAGES

    Murugesan, Sugeerth; Bouchard, Kristofer; Chang, Edward; ...

    2016-10-02

    Here, we present ECoG ClusterFlow, a novel interactive visual analysis tool for the exploration of high-resolution Electrocorticography (ECoG) data. Our system detects and visualizes dynamic high-level structures, such as communities, using the time-varying spatial connectivity network derived from the high-resolution ECoG data. ECoG ClusterFlow provides a multi-scale visualization of the spatio-temporal patterns underlying the time-varying communities using two views: 1) an overview summarizing the evolution of clusters over time and 2) a hierarchical glyph-based technique that uses data aggregation and small multiples techniques to visualize the propagation of clusters in their spatial domain. ECoG ClusterFlow makes it possible 1) tomore » compare the spatio-temporal evolution patterns across various time intervals, 2) to compare the temporal information at varying levels of granularity, and 3) to investigate the evolution of spatial patterns without occluding the spatial context information. Lastly, we present case studies done in collaboration with neuroscientists on our team for both simulated and real epileptic seizure data aimed at evaluating the effectiveness of our approach.« less

  17. Testing for shared biogeographic history in the lower Central American freshwater fish assemblage using comparative phylogeography: concerted, independent, or multiple evolutionary responses?

    PubMed Central

    Bagley, Justin C; Johnson, Jerald B

    2014-01-01

    A central goal of comparative phylogeography is determining whether codistributed species experienced (1) concerted evolutionary responses to past geological and climatic events, indicated by congruent spatial and temporal patterns (“concerted-response hypothesis”); (2) independent responses, indicated by spatial incongruence (“independent-response hypothesis”); or (3) multiple responses (“multiple-response hypothesis”), indicated by spatial congruence but temporal incongruence (“pseudocongruence”) or spatial and temporal incongruence (“pseudoincongruence”). We tested these competing hypotheses using DNA sequence data from three livebearing fish species codistributed in the Nicaraguan depression of Central America (Alfaro cultratus, Poecilia gillii, and Xenophallus umbratilis) that we predicted might display congruent responses due to co-occurrence in identical freshwater drainages. Spatial analyses recovered different subdivisions of genetic structure for each species, despite shared finer-scale breaks in northwestern Costa Rica (also supported by phylogenetic results). Isolation-with-migration models estimated incongruent timelines of among-region divergences, with A. cultratus and Xenophallus populations diverging over Miocene–mid-Pleistocene while P. gillii populations diverged over mid-late Pleistocene. Approximate Bayesian computation also lent substantial support to multiple discrete divergences over a model of simultaneous divergence across shared spatial breaks (e.g., Bayes factor [B10] = 4.303 for Ψ [no. of divergences] > 1 vs. Ψ = 1). Thus, the data support phylogeographic pseudoincongruence consistent with the multiple-response hypothesis. Model comparisons also indicated incongruence in historical demography, for example, support for intraspecific late Pleistocene population growth was unique to P. gillii, despite evidence for finer-scale population expansions in the other taxa. Empirical tests for phylogeographic congruence indicate that multiple evolutionary responses to historical events have shaped the population structure of freshwater species codistributed within the complex landscapes in/around the Nicaraguan depression. Recent community assembly through different routes (i.e., different past distributions or colonization routes), and intrinsic ecological differences among species, has likely contributed to the unique phylogeographical patterns displayed by these Neotropical fishes. PMID:24967085

  18. Estimating and interpreting migration of Amazonian forests using spatially implicit and semi-explicit neutral models.

    PubMed

    Pos, Edwin; Guevara Andino, Juan Ernesto; Sabatier, Daniel; Molino, Jean-François; Pitman, Nigel; Mogollón, Hugo; Neill, David; Cerón, Carlos; Rivas-Torres, Gonzalo; Di Fiore, Anthony; Thomas, Raquel; Tirado, Milton; Young, Kenneth R; Wang, Ophelia; Sierra, Rodrigo; García-Villacorta, Roosevelt; Zagt, Roderick; Palacios Cuenca, Walter; Aulestia, Milton; Ter Steege, Hans

    2017-06-01

    With many sophisticated methods available for estimating migration, ecologists face the difficult decision of choosing for their specific line of work. Here we test and compare several methods, performing sanity and robustness tests, applying to large-scale data and discussing the results and interpretation. Five methods were selected to compare for their ability to estimate migration from spatially implicit and semi-explicit simulations based on three large-scale field datasets from South America (Guyana, Suriname, French Guiana and Ecuador). Space was incorporated semi-explicitly by a discrete probability mass function for local recruitment, migration from adjacent plots or from a metacommunity. Most methods were able to accurately estimate migration from spatially implicit simulations. For spatially semi-explicit simulations, estimation was shown to be the additive effect of migration from adjacent plots and the metacommunity. It was only accurate when migration from the metacommunity outweighed that of adjacent plots, discrimination, however, proved to be impossible. We show that migration should be considered more an approximation of the resemblance between communities and the summed regional species pool. Application of migration estimates to simulate field datasets did show reasonably good fits and indicated consistent differences between sets in comparison with earlier studies. We conclude that estimates of migration using these methods are more an approximation of the homogenization among local communities over time rather than a direct measurement of migration and hence have a direct relationship with beta diversity. As betadiversity is the result of many (non)-neutral processes, we have to admit that migration as estimated in a spatial explicit world encompasses not only direct migration but is an ecological aggregate of these processes. The parameter m of neutral models then appears more as an emerging property revealed by neutral theory instead of being an effective mechanistic parameter and spatially implicit models should be rejected as an approximation of forest dynamics.

  19. Extended-range high-resolution dynamical downscaling over a continental-scale spatial domain with atmospheric and surface nudging

    NASA Astrophysics Data System (ADS)

    Husain, S. Z.; Separovic, L.; Yu, W.; Fernig, D.

    2014-12-01

    Extended-range high-resolution mesoscale simulations with limited-area atmospheric models when applied to downscale regional analysis fields over large spatial domains can provide valuable information for many applications including the weather-dependent renewable energy industry. Long-term simulations over a continental-scale spatial domain, however, require mechanisms to control the large-scale deviations in the high-resolution simulated fields from the coarse-resolution driving fields. As enforcement of the lateral boundary conditions is insufficient to restrict such deviations, large scales in the simulated high-resolution meteorological fields are therefore spectrally nudged toward the driving fields. Different spectral nudging approaches, including the appropriate nudging length scales as well as the vertical profiles and temporal relaxations for nudging, have been investigated to propose an optimal nudging strategy. Impacts of time-varying nudging and generation of hourly analysis estimates are explored to circumvent problems arising from the coarse temporal resolution of the regional analysis fields. Although controlling the evolution of the atmospheric large scales generally improves the outputs of high-resolution mesoscale simulations within the surface layer, the prognostically evolving surface fields can nevertheless deviate from their expected values leading to significant inaccuracies in the predicted surface layer meteorology. A forcing strategy based on grid nudging of the different surface fields, including surface temperature, soil moisture, and snow conditions, toward their expected values obtained from a high-resolution offline surface scheme is therefore proposed to limit any considerable deviation. Finally, wind speed and temperature at wind turbine hub height predicted by different spectrally nudged extended-range simulations are compared against observations to demonstrate possible improvements achievable using higher spatiotemporal resolution.

  20. The beta-diversity of species interactions: Untangling the drivers of geographic variation in plant-pollinator diversity and function across scales.

    PubMed

    Burkle, Laura A; Myers, Jonathan A; Belote, R Travis

    2016-01-01

    Geographic patterns of biodiversity have long inspired interest in processes that shape the assembly, diversity, and dynamics of communities at different spatial scales. To study mechanisms of community assembly, ecologists often compare spatial variation in community composition (beta-diversity) across environmental and spatial gradients. These same patterns inspired evolutionary biologists to investigate how micro- and macro-evolutionary processes create gradients in biodiversity. Central to these perspectives are species interactions, which contribute to community assembly and geographic variation in evolutionary processes. However, studies of beta-diversity have predominantly focused on single trophic levels, resulting in gaps in our understanding of variation in species-interaction networks (interaction beta-diversity), especially at scales most relevant to evolutionary studies of geographic variation. We outline two challenges and their consequences in scaling-up studies of interaction beta-diversity from local to biogeographic scales using plant-pollinator interactions as a model system in ecology, evolution, and conservation. First, we highlight how variation in regional species pools may contribute to variation in interaction beta-diversity among biogeographic regions with dissimilar evolutionary history. Second, we highlight how pollinator behavior (host-switching) links ecological networks to geographic patterns of plant-pollinator interactions and evolutionary processes. Third, we outline key unanswered questions regarding the role of geographic variation in plant-pollinator interactions for conservation and ecosystem services (pollination) in changing environments. We conclude that the largest advances in the burgeoning field of interaction beta-diversity will come from studies that integrate frameworks in ecology, evolution, and conservation to understand the causes and consequences of interaction beta-diversity across scales. © 2016 Botanical Society of America.

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