Self-similarity in nature

NASA Astrophysics Data System (ADS)

Timashev, S. F.

2000-02-01

A general phenomenological approach to the analysis of experimental temporal, spatial and energetic series for extracting truly physical non-model parameters ("passport data") is presented, which may be used to characterize and distinguish the evolution as well as the spatial and energetic structure of any open nonlinear dissipative system. This methodology is based on a postulate concerning the crucial information contained in the sequences of non-regularities of the measured dynamic variable (temporal, spatial, energetic). In accordance with this approach, multi-parametric formulas for dynamic variable power spectra as well as for structural functions of different orders are identical for every spatial-temporal-energetic level of the system under consideration. In effect, this entails the introduction of a new kind of self-similarity in Nature. An algorithm has been developed for obtaining as many "passport data" as are necessary for the characterization of a dynamic system. Applications of this approach in the analysis of various experimental series (temporal, spatial, energetic) demonstrate its potential for defining adequate phenomenological parameters of different dynamic processes and structures.

Effects of Pro-Cholinergic Treatment in Patients Suffering from Spatial Neglect

PubMed Central

Lucas, N.; Saj, A.; Schwartz, S.; Ptak, R.; Thomas, C.; Conne, P.; Leroy, R.; Pavin, S.; Diserens, K.; Vuilleumier, Patrik

2013-01-01

Spatial neglect is a neurological condition characterized by a breakdown of spatial cognition contralateral to hemispheric damage. Deficits in spatial attention toward the contralesional side are considered to be central to this syndrome. Brain lesions typically involve right fronto-parietal cortices mediating attentional functions and subcortical connections in underlying white matter. Convergent findings from neuroimaging and behavioral studies in both animals and humans suggest that the cholinergic system might also be critically implicated in selective attention by modulating cortical function via widespread projections from the basal forebrain. Here we asked whether deficits in spatial attention associated with neglect could partly result from a cholinergic deafferentation of cortical areas subserving attentional functions, and whether such disturbances could be alleviated by pro-cholinergic therapy. We examined the effect of a single-dose transdermal nicotine treatment on spatial neglect in 10 stroke patients in a double-blind placebo-controlled protocol, using a standardized battery of neglect tests. Nicotine-induced systematic improvement on cancellation tasks and facilitated orienting to single visual targets, but had no significant effect on other tests. These results support a global effect of nicotine on attention and arousal, but no effect on other spatial mechanisms impaired in neglect. PMID:24062674

[Combined effects of benzene and chromium on navigation learning and long-term spatial memory in rats].

PubMed

Tikhonov, V V; Ermolina, E V; Miroshnichenko, I V

2009-01-01

The impact of long-term intake of drinking water containing the high level of chromium and benzene or their mixture on navigation learning and long-term spatial memory was studied in a Morris water maze. The chronic neurotoxic effect of benzene was characterized by worse long-term memory, which upon its exposure in combination with chromium remained unchanged and failed to block the realization of a positive effect of chromium on the mechanism of navigation learning.

Acousto-Optic Tunable Filter Hyperspectral Microscope Imaging Method for Characterizing Spectra from Foodborne Pathogens.

USDA-ARS?s Scientific Manuscript database

Hyperspectral microscope imaging (HMI) method, which provides both spatial and spectral characteristics of samples, can be effective for foodborne pathogen detection. The acousto-optic tunable filter (AOTF)-based HMI method can be used to characterize spectral properties of biofilms formed by Salmon...

Spatial distribrrtion of soil carbon in southern New England hardwood forest landscapes

Treesearch

Aletta A. Davis; Mark H. Stolt; Jana E. Compton

2004-01-01

Understanding soil organic C (SOC) spatial variability is critical when developing C budgets, explaining the cause and effects of climate change, and for basic ecosystem characterization. We investigated delineations of four soil series to elucidate teh factors that affect the size, distribution, and varibility of SOC pools from horizon to landscape scales. These soils...

Accounting for small scale heterogeneity in ecohydrologic watershed models

NASA Astrophysics Data System (ADS)

Bhaskar, A.; Fleming, B.; Hogan, D. M.

2016-12-01

Spatially distributed ecohydrologic models are inherently constrained by the spatial resolution of their smallest units, below which land and processes are assumed to be homogenous. At coarse scales, heterogeneity is often accounted for by computing store and fluxes of interest over a distribution of land cover types (or other sources of heterogeneity) within spatially explicit modeling units. However this approach ignores spatial organization and the lateral transfer of water and materials downslope. The challenge is to account both for the role of flow network topology and fine-scale heterogeneity. We present a new approach that defines two levels of spatial aggregation and that integrates spatially explicit network approach with a flexible representation of finer-scale aspatial heterogeneity. Critically, this solution does not simply increase the resolution of the smallest spatial unit, and so by comparison, results in improved computational efficiency. The approach is demonstrated by adapting Regional Hydro-Ecologic Simulation System (RHESSys), an ecohydrologic model widely used to simulate climate, land use, and land management impacts. We illustrate the utility of our approach by showing how the model can be used to better characterize forest thinning impacts on ecohydrology. Forest thinning is typically done at the scale of individual trees, and yet management responses of interest include impacts on watershed scale hydrology and on downslope riparian vegetation. Our approach allow us to characterize the variability in tree size/carbon reduction and water transfers between neighboring trees while still capturing hillslope to watershed scale effects, Our illustrative example demonstrates that accounting for these fine scale effects can substantially alter model estimates, in some cases shifting the impacts of thinning on downslope water availability from increases to decreases. We conclude by describing other use cases that may benefit from this approach including characterizing urban vegetation and storm water management features and their impact on watershed scale hydrology and biogeochemical cycling.

Accounting for small scale heterogeneity in ecohydrologic watershed models

NASA Astrophysics Data System (ADS)

Burke, W.; Tague, C.

2017-12-01

Spatially distributed ecohydrologic models are inherently constrained by the spatial resolution of their smallest units, below which land and processes are assumed to be homogenous. At coarse scales, heterogeneity is often accounted for by computing store and fluxes of interest over a distribution of land cover types (or other sources of heterogeneity) within spatially explicit modeling units. However this approach ignores spatial organization and the lateral transfer of water and materials downslope. The challenge is to account both for the role of flow network topology and fine-scale heterogeneity. We present a new approach that defines two levels of spatial aggregation and that integrates spatially explicit network approach with a flexible representation of finer-scale aspatial heterogeneity. Critically, this solution does not simply increase the resolution of the smallest spatial unit, and so by comparison, results in improved computational efficiency. The approach is demonstrated by adapting Regional Hydro-Ecologic Simulation System (RHESSys), an ecohydrologic model widely used to simulate climate, land use, and land management impacts. We illustrate the utility of our approach by showing how the model can be used to better characterize forest thinning impacts on ecohydrology. Forest thinning is typically done at the scale of individual trees, and yet management responses of interest include impacts on watershed scale hydrology and on downslope riparian vegetation. Our approach allow us to characterize the variability in tree size/carbon reduction and water transfers between neighboring trees while still capturing hillslope to watershed scale effects, Our illustrative example demonstrates that accounting for these fine scale effects can substantially alter model estimates, in some cases shifting the impacts of thinning on downslope water availability from increases to decreases. We conclude by describing other use cases that may benefit from this approach including characterizing urban vegetation and storm water management features and their impact on watershed scale hydrology and biogeochemical cycling.

The effect of occlusion on the semantics of projective spatial terms: a case study in grounding language in perception.

PubMed

Kelleher, John D; Ross, Robert J; Sloan, Colm; Mac Namee, Brian

2011-02-01

Although data-driven spatial template models provide a practical and cognitively motivated mechanism for characterizing spatial term meaning, the influence of perceptual rather than solely geometric and functional properties has yet to be systematically investigated. In the light of this, in this paper, we investigate the effects of the perceptual phenomenon of object occlusion on the semantics of projective terms. We did this by conducting a study to test whether object occlusion had a noticeable effect on the acceptance values assigned to projective terms with respect to a 2.5-dimensional visual stimulus. Based on the data collected, a regression model was constructed and presented. Subsequent analysis showed that the regression model that included the occlusion factor outperformed an adaptation of Regier & Carlson's well-regarded AVS model for that same spatial configuration.

A hybrid quantum eraser scheme for characterization of free-space and fiber communication channels

NASA Astrophysics Data System (ADS)

Nape, Isaac; Kyeremah, Charlotte; Vallés, Adam; Rosales-Guzmán, Carmelo; Buah-Bassuah, Paul K.; Forbes, Andrew

2018-02-01

We demonstrate a simple projective measurement based on the quantum eraser concept that can be used to characterize the disturbances of any communication channel. Quantum erasers are commonly implemented as spatially separated path interferometric schemes. Here we exploit the advantages of redefining the which-path information in terms of spatial modes, replacing physical paths with abstract paths of orbital angular momentum (OAM). Remarkably, vector modes (natural modes of free-space and fiber) have a non-separable feature of spin-orbit coupled states, equivalent to the description of two independently marked paths. We explore the effects of fiber perturbations by probing a step-index optical fiber channel with a vector mode, relevant to high-order spatial mode encoding of information for ultra-fast fiber communications.

Predators determine how weather affects the spatial niche of lizard prey: exploring niche dynamics at a fine scale.

PubMed

Lopez-Darias, Marta; Schoener, Thomas W; Spiller, David A; Losos, Jonathan B

2012-12-01

Although abiotic and biotic factors can interact to shape the spatial niche of a species, studies that explore the interactive effects of both at a local scale are rare. We demonstrate that one of the main axes (perch height) characterizing the spatial niche of a common lizard, Anolis sagrei, varies according to the interactive effects of weather and the activity of a larger predatory lizard, Leiocephalus carinatus. Results were completely consistent: no matter how favorable the weather conditions for using the ground (mainly characterized by temperature, humidity, wind speed, rain), A. sagrei did not do so if the predator was present. Hence, great behavioral plasticity enabled A. sagrei to adjust its use of space very quickly. To the best of our knowledge, these results constitute the first field demonstration for anoles (and possibly for other animals as well) of how time-varying environmental conditions and predator presence interact to produce short-term changes in utilization along a major niche axis.

Spatial-spectral characterization of focused spatially chirped broadband laser beams.

PubMed

Greco, Michael J; Block, Erica; Meier, Amanda K; Beaman, Alex; Cooper, Samuel; Iliev, Marin; Squier, Jeff A; Durfee, Charles G

2015-11-20

Proper alignment is critical to obtain the desired performance from focused spatially chirped beams, for example in simultaneous spatial and temporal focusing (SSTF). We present a simple technique for inspecting the beam paths and focusing conditions for the spectral components of a broadband beam. We spectrally resolve the light transmitted past a knife edge as it was scanned across the beam at several axial positions. The measurement yields information about spot size, M2, and the propagation paths of different frequency components. We also present calculations to illustrate the effects of defocus aberration on SSTF beams.

Framework for computing the spatial coherence effects of polycapillary x-ray optics

PubMed Central

Zysk, Adam M.; Schoonover, Robert W.; Xu, Qiaofeng; Anastasio, Mark A.

2012-01-01

Despite the extensive use of polycapillary x-ray optics for focusing and collimating applications, there remains a significant need for characterization of the coherence properties of the output wavefield. In this work, we present the first quantitative computational method for calculation of the spatial coherence effects of polycapillary x-ray optical devices. This method employs the coherent mode decomposition of an extended x-ray source, geometric optical propagation of individual wavefield modes through a polycapillary device, output wavefield calculation by ray data resampling onto a uniform grid, and the calculation of spatial coherence properties by way of the spectral degree of coherence. PMID:22418154

Event-Related Potential Responses to Task Switching Are Sensitive to Choice of Spatial Filter

PubMed Central

Wong, Aaron S. W.; Cooper, Patrick S.; Conley, Alexander C.; McKewen, Montana; Fulham, W. Ross; Michie, Patricia T.; Karayanidis, Frini

2018-01-01

Event-related potential (ERP) studies using the task-switching paradigm show that multiple ERP components are modulated by activation of proactive control processes involved in preparing to repeat or switch task and reactive control processes involved in implementation of the current or new task. Our understanding of the functional significance of these ERP components has been hampered by variability in their robustness, as well as their temporal and scalp distribution across studies. The aim of this study is to examine the effect of choice of reference electrode or spatial filter on the number, timing and scalp distribution of ERP elicited during task-switching. We compared four configurations, including the two most common (i.e., average mastoid reference and common average reference) and two novel ones that aim to reduce volume conduction (i.e., reference electrode standardization technique (REST) and surface Laplacian) on mixing cost and switch cost effects in cue-locked and target-locked ERP waveforms in 201 healthy participants. All four spatial filters showed the same well-characterized ERP components that are typically seen in task-switching paradigms: the cue-locked switch positivity and target-locked N2/P3 effect. However, both the number of ERP effects associated with mixing and switch cost, and their temporal and spatial resolution were greater with the surface Laplacian transformation which revealed rapid temporal adjustments that were not identifiable with other spatial filters. We conclude that the surface Laplacian transformation may be more suited to characterize EEG signatures of complex spatiotemporal networks involved in cognitive control. PMID:29568260

A Brief History of the use of Electromagnetic Induction Techniques in Soil Survey

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Doolittle, James

2017-04-01

Electromagnetic induction (EMI) has been used to characterize the spatial variability of soil properties since the late 1970s. Initially used to assess soil salinity, the use of EMI in soil studies has expanded to include: mapping soil types; characterizing soil water content and flow patterns; assessing variations in soil texture, compaction, organic matter content, and pH; and determining the depth to subsurface horizons, stratigraphic layers or bedrock, among other uses. In all cases the soil property being investigated must influence soil apparent electrical conductivity (ECa) either directly or indirectly for EMI techniques to be effective. An increasing number and diversity of EMI sensors have been developed in response to users' needs and the availability of allied technologies, which have greatly improved the functionality of these tools and increased the amount and types of data that can be gathered with a single pass. EMI investigations provide several benefits for soil studies. The large amount of georeferenced data that can be rapidly and inexpensively collected with EMI provides more complete characterization of the spatial variations in soil properties than traditional sampling techniques. In addition, compared to traditional soil survey methods, EMI can more effectively characterize diffuse soil boundaries and identify included areas of dissimilar soils within mapped soil units, giving soil scientists greater confidence when collecting spatial soil information. EMI techniques do have limitations; results are site-specific and can vary depending on the complex interactions among multiple and variable soil properties. Despite this, EMI techniques are increasingly being used to investigate the spatial variability of soil properties at field and landscape scales. The future should witness a greater use of multiple-frequency and multiple-coil EMI sensors and integration with other sensors to assess the spatial variability of soil properties. Data analysis will be improved with advanced processing and presentation systems and more sophisticated geostatistical modeling algorithms will be developed and used to interpolate EMI data, improve the resolution of subsurface features, and assess soil properties.

Microstructure characterization of multi-phase composites and utilization of phase change materials and recycled rubbers in cementitious materials

NASA Astrophysics Data System (ADS)

Meshgin, Pania

2011-12-01

This research focuses on two important subjects: (1) Characterization of heterogeneous microstructure of multi-phase composites and the effect of microstructural features on effective properties of the material. (2) Utilizations of phase change materials and recycled rubber particles from waste tires to improve thermal properties of insulation materials used in building envelopes. Spatial pattern of multi-phase and multidimensional internal structures of most composite materials are highly random. Quantitative description of the spatial distribution should be developed based on proper statistical models, which characterize the morphological features. For a composite material with multi-phases, the volume fraction of the phases as well as the morphological parameters of the phases have very strong influences on the effective property of the composite. These morphological parameters depend on the microstructure of each phase. This study intends to include the effect of higher order morphological details of the microstructure in the composite models. The higher order statistics, called two-point correlation functions characterize various behaviors of the composite at any two points in a stochastic field. Specifically, correlation functions of mosaic patterns are used in the study for characterizing transport properties of composite materials. One of the most effective methods to improve energy efficiency of buildings is to enhance thermal properties of insulation materials. The idea of using phase change materials and recycled rubber particles such as scrap tires in insulation materials for building envelopes has been studied.

Variation in nutrient characteristics of surface soils from the Luquillo Experimental Forest of Puerto Rico: A multivariate perspective.

Treesearch

S. B. Cox; M. R. Willig; F. N. Scatena

2002-01-01

We assessed the effects of landscape features (vegetation type and topography), season, and spatial hierarchy on the nutrient content of surface soils in the Luquillo Experimental Forest (LEF) of Puerto Rico. Considerable spatial variation characterized the soils of the LEF, and differences between replicate sites within each combination of vegetation type (tabonuco vs...

Lidar: shedding new light on habitat characterization and modeling.

Treesearch

Kerri T. Vierling; Lee A. Vierling; William A. Gould; Sebastian Martinuzzi; Rick M. Clawges

2008-01-01

Ecologists need data on animal–habitat associations in terrestrial and aquatic environments to design and implement effective conservation strategies. Habitat characteristics used in models typically incorporate (1) field data of limited spatial extent and/or (2) remote sensing data that do not characterize the vertical habitat structure. Remote sensing tools that...

Along-track calibration of SWIR push-broom hyperspectral imaging system

NASA Astrophysics Data System (ADS)

Jemec, Jurij; Pernuš, Franjo; Likar, Boštjan; Bürmen, Miran

2016-05-01

Push-broom hyperspectral imaging systems are increasingly used for various medical, agricultural and military purposes. The acquired images contain spectral information in every pixel of the imaged scene collecting additional information about the imaged scene compared to the classical RGB color imaging. Due to the misalignment and imperfections in the optical components comprising the push-broom hyperspectral imaging system, variable spectral and spatial misalignments and blur are present in the acquired images. To capture these distortions, a spatially and spectrally variant response function must be identified at each spatial and spectral position. In this study, we propose a procedure to characterize the variant response function of Short-Wavelength Infrared (SWIR) push-broom hyperspectral imaging systems in the across-track and along-track direction and remove its effect from the acquired images. A custom laser-machined spatial calibration targets are used for the characterization. The spatial and spectral variability of the response function in the across-track and along-track direction is modeled by a parametrized basis function. Finally, the characterization results are used to restore the distorted hyperspectral images in the across-track and along-track direction by a Richardson-Lucy deconvolution-based algorithm. The proposed calibration method in the across-track and along-track direction is thoroughly evaluated on images of targets with well-defined geometric properties. The results suggest that the proposed procedure is well suited for fast and accurate spatial calibration of push-broom hyperspectral imaging systems.

Three-dimensional characterization of the effective second-order nonlinearity in periodically poled crystals

NASA Astrophysics Data System (ADS)

Holmgren, Stefan J.; Pasiskevicius, Valdas; Wang, Shunhua; Laurell, Fredrik

2003-09-01

A novel technique for characterization of the second-order nonlinearity in nonlinear crystals is presented. It utilizes group-velocity walk-off between femtosecond pulses in type II SHG to achieve three-dimensional resolution of the nonlinearity. The longitudinal and transversal spatial resolution can be set independently. The technique is especially useful for characterizing quasi-phase-matched nonlinear crystals, and it is demonstrated in potassium titanyl phosphate.

Networks of volatility spillovers among stock markets

NASA Astrophysics Data System (ADS)

Baumöhl, Eduard; Kočenda, Evžen; Lyócsa, Štefan; Výrost, Tomáš

2018-01-01

In our network analysis of 40 developed, emerging and frontier stock markets during the 2006-2014 period, we describe and model volatility spillovers during both the global financial crisis and tranquil periods. The resulting market interconnectedness is depicted by fitting a spatial model incorporating several exogenous characteristics. We document the presence of significant temporal proximity effects between markets and somewhat weaker temporal effects with regard to the US equity market - volatility spillovers decrease when markets are characterized by greater temporal proximity. Volatility spillovers also present a high degree of interconnectedness, which is measured by high spatial autocorrelation. This finding is confirmed by spatial regression models showing that indirect effects are much stronger than direct effects; i.e., market-related changes in 'neighboring' markets (within a network) affect volatility spillovers more than changes in the given market alone, suggesting that spatial effects simply cannot be ignored when modeling stock market relationships. Our results also link spillovers of escalating magnitude with increasing market size, market liquidity and economic openness.

Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

Treesearch

Natalie A. Griffiths; Paul J. Hanson; Daniel M. Ricciuto; Colleen M. Iversen; Anna M. Jensen; Avni Malhotra; Karis J. McFarlane; Richard J. Norby; Khachik Sargsyan; Stephen D. Sebestyen; Xiaoying Shi; Anthony P. Walker; Eric J. Ward; Jeffrey M. Warren; David J. Weston

2017-01-01

We are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial...

Snowpack spatial variability: Towards understanding its effect on remote sensing measurements and snow slope stability

NASA Astrophysics Data System (ADS)

Marshall, Hans-Peter

The distribution of water in the snow-covered areas of the world is an important climate change indicator, and it is a vital component of the water cycle. At local and regional scales, the snow water equivalent (SWE), the amount of liquid water a given area of the snowpack represents, is very important for water resource management, flood forecasting, and prediction of available hydropower energy. Measurements from only a few automatic weather stations, such as the SNOTEL network, or sparse manual snowpack measurements are typically extrapolated for estimating SWE over an entire basin. Widespread spatial variability in the distribution of SWE and snowpack stratigraphy at local scales causes large errors in these basin estimates. Remote sensing measurements offer a promising alternative, due to their large spatial coverage and high temporal resolution. Although snow cover extent can currently be estimated from remote sensing data, accurately quantifying SWE from remote sensing measurements has remained difficult, due to a high sensitivity to variations in grain size and stratigraphy. In alpine snowpacks, the large degree of spatial variability of snowpack properties and geometry, caused by topographic, vegetative, and microclimatic effects, also makes prediction of snow avalanches very difficult. Ground-based radar and penetrometer measurements can quickly and accurately characterize snowpack properties and SWE in the field. A portable lightweight radar was developed, and allows a real-time estimate of SWE to within 10%, as well as measurements of depths of all major density transitions within the snowpack. New analysis techniques developed in this thesis allow accurate estimates of mechanical properties and an index of grain size to be retrieved from the SnowMicroPenetrometer. These two tools together allow rapid characterization of the snowpack's geometry, mechanical properties, and SWE, and are used to guide a finite element model to study the stress distribution on a slope. The ability to accurately characterize snowpack properties at much higher resolutions and spatial extent than previously possible will hopefully help lead to a more complete understanding of spatial variability, its effect on remote sensing measurements and snow slope stability, and result in improvements in avalanche prediction and accuracy of SWE estimates from space.

Quantitative characterization of the regressive ecological succession by fractal analysis of plant spatial patterns

USGS Publications Warehouse

Alados, C.L.; Pueyo, Y.; Giner, M.L.; Navarro, T.; Escos, J.; Barroso, F.; Cabezudo, B.; Emlen, J.M.

2003-01-01

We studied the effect of grazing on the degree of regression of successional vegetation dynamic in a semi-arid Mediterranean matorral. We quantified the spatial distribution patterns of the vegetation by fractal analyses, using the fractal information dimension and spatial autocorrelation measured by detrended fluctuation analyses (DFA). It is the first time that fractal analysis of plant spatial patterns has been used to characterize the regressive ecological succession. Plant spatial patterns were compared over a long-term grazing gradient (low, medium and heavy grazing pressure) and on ungrazed sites for two different plant communities: A middle dense matorral of Chamaerops and Periploca at Sabinar-Romeral and a middle dense matorral of Chamaerops, Rhamnus and Ulex at Requena-Montano. The two communities differed also in the microclimatic characteristics (sea oriented at the Sabinar-Romeral site and inland oriented at the Requena-Montano site). The information fractal dimension increased as we moved from a middle dense matorral to discontinuous and scattered matorral and, finally to the late regressive succession, at Stipa steppe stage. At this stage a drastic change in the fractal dimension revealed a change in the vegetation structure, accurately indicating end successional vegetation stages. Long-term correlation analysis (DFA) revealed that an increase in grazing pressure leads to unpredictability (randomness) in species distributions, a reduction in diversity, and an increase in cover of the regressive successional species, e.g. Stipa tenacissima L. These comparisons provide a quantitative characterization of the successional dynamic of plant spatial patterns in response to grazing perturbation gradient. ?? 2002 Elsevier Science B.V. All rights reserved.

Spotting effect in microarray experiments

PubMed Central

Mary-Huard, Tristan; Daudin, Jean-Jacques; Robin, Stéphane; Bitton, Frédérique; Cabannes, Eric; Hilson, Pierre

2004-01-01

Background Microarray data must be normalized because they suffer from multiple biases. We have identified a source of spatial experimental variability that significantly affects data obtained with Cy3/Cy5 spotted glass arrays. It yields a periodic pattern altering both signal (Cy3/Cy5 ratio) and intensity across the array. Results Using the variogram, a geostatistical tool, we characterized the observed variability, called here the spotting effect because it most probably arises during steps in the array printing procedure. Conclusions The spotting effect is not appropriately corrected by current normalization methods, even by those addressing spatial variability. Importantly, the spotting effect may alter differential and clustering analysis. PMID:15151695

Characterization of Forested Landscapes From Remotely Sensed Data Using Fractals and Spatial Autocorrelation

NASA Technical Reports Server (NTRS)

Al-Hamdan, Mohammad Z.; Cruise, James F.; Rickman, Douglas L.; Quattrochi, Dale A.

2007-01-01

The characterization of forested areas is frequently required in resource management practice. Passive remotely sensed data, which are much more accessible and cost effective than are active data, have rarely, if ever, been used to characterize forest structure directly, but rather they usually focus on the estimation of indirect measurement of biomass or canopy coverage. In this study, some spatial analysis techniques are presented that might be employed with Landsat TM data to analyze forest structure characteristics. A case study is presented wherein fractal dimensions, along with a simple spatial autocorrelation technique (Moran s I), were related to stand density parameters of the Oakmulgee National Forest located in the southeastern United States (Alabama). The results of the case study presented herein have shown that as the percentage of smaller diameter trees becomes greater, and particularly if it exceeds 50%, then the canopy image obtained from Landsat TM data becomes sufficiently homogeneous so that the spatial indices reach their lower limits and thus are no longer determinative. It also appears, at least for the Oakmulgee forest, that the relationships between the spatial indices and forest class percentages within the boundaries can reasonably be considered linear. The linear relationship is much more pronounced in the sawtimber and saplings cases than in samples dominated by medium sized trees (poletimber). In addition, it also appears that, at least for the Oakmulgee forest, the relationships between the spatial indices and forest species groups (Hardwood and Softwood) percentages can reasonably be considered linear. The linear relationship is more pronounced in the forest species groups cases than in the forest classes cases. These results appear to indicate that both fractal dimensions and spatial autocorrelation indices hold promise as means of estimating forest stand characteristics from remotely sensed images. However, additional work is needed to confirm that the boundaries identified for Oakmulgee forest and the linear nature of the relationship between image complexity indices and forest characteristics are generally evident in other forests. In addition, the effects of other parameters such ,as topographic relief and image distortion due to sun angle and cloud cover, for example, need to be examined.

Characterizing spatial structure of sediment E. coli populations to inform sampling design.

PubMed

Piorkowski, Gregory S; Jamieson, Rob C; Hansen, Lisbeth Truelstrup; Bezanson, Greg S; Yost, Chris K

2014-01-01

Escherichia coli can persist in streambed sediments and influence water quality monitoring programs through their resuspension into overlying waters. This study examined the spatial patterns in E. coli concentration and population structure within streambed morphological features during baseflow and following stormflow to inform sampling strategies for representative characterization of E. coli populations within a stream reach. E. coli concentrations in bed sediments were significantly different (p = 0.002) among monitoring sites during baseflow, and significant interactive effects (p = 0.002) occurred among monitoring sites and morphological features following stormflow. Least absolute shrinkage and selection operator (LASSO) regression revealed that water velocity and effective particle size (D 10) explained E. coli concentration during baseflow, whereas sediment organic carbon, water velocity and median particle diameter (D 50) were important explanatory variables following stormflow. Principle Coordinate Analysis illustrated the site-scale differences in sediment E. coli populations between disconnected stream segments. Also, E. coli populations were similar among depositional features within a reach, but differed in relation to high velocity features (e.g., riffles). Canonical correspondence analysis resolved that E. coli population structure was primarily explained by spatial (26.9–31.7 %) over environmental variables (9.2–13.1 %). Spatial autocorrelation existed among monitoring sites and morphological features for both sampling events, and gradients in mean particle diameter and water velocity influenced E. coli population structure for the baseflow and stormflow sampling events, respectively. Representative characterization of streambed E. coli requires sampling of depositional and high velocity environments to accommodate strain selectivity among these features owing to sediment and water velocity heterogeneity.

Characterization of spatial distribution of Tetranychus urticae in peppermint in California and implication for improving sampling plan.

PubMed

Rijal, Jhalendra P; Wilson, Rob; Godfrey, Larry D

2016-02-01

Twospotted spider mite, Tetranychus urticae Koch, is an important pest of peppermint in California, USA. Spider mite feeding on peppermint leaves causes physiological changes in the plant, which coupling with the favorable environmental condition can lead to increased mite infestations. Significant yield loss can occur in absence of pest monitoring and timely management. Understating the within-field spatial distribution of T. urticae is critical for the development of reliable sampling plan. The study reported here aims to characterize the spatial distribution of mite infestation in four commercial peppermint fields in northern California using spatial techniques, variogram and Spatial Analysis by Distance IndicEs (SADIE). Variogram analysis revealed that there was a strong evidence for spatially dependent (aggregated) mite population in 13 of 17 sampling dates and the physical distance of the aggregation reached maximum to 7 m in peppermint fields. Using SADIE, 11 of 17 sampling dates showed aggregated distribution pattern of mite infestation. Combining results from variogram and SADIE analysis, the spatial aggregation of T. urticae was evident in all four fields for all 17 sampling dates evaluated. Comparing spatial association using SADIE, ca. 62% of the total sampling pairs showed a positive association of mite spatial distribution patterns between two consecutive sampling dates, which indicates a strong spatial and temporal stability of mite infestation in peppermint fields. These results are discussed in relation to behavior of spider mite distribution within field, and its implications for improving sampling guidelines that are essential for effective pest monitoring and management.

Evaluating ASTER satellite imagery and gradient modeling for mapping and characterizing wildland fire fuels

Treesearch

Michael J. Falkowski; Paul Gessler; Penelope Morgan; Alistair M. S. Smith; Andrew T. Hudak

2004-01-01

Land managers need cost-effective methods for mapping and characterizing fire fuels quickly and accurately. The advent of sensors with increased spatial resolution may improve the accuracy and reduce the cost of fuels mapping. The objective of this research is to evaluate the accuracy and utility of imagery from the Advanced Spaceborne Thermal Emission and Reflection...

Evaluating the ASTER sensor for mapping and characterizing forest fire fuels in northern Idaho

Treesearch

Michael J. Falkowski; Paul Gessler; Penelope Morgan; Alistair M. S. Smith; Andrew T. Hudak

2004-01-01

Land managers need cost-effective methods for mapping and characterizing fire fuels quickly and accurately. The advent of sensors with increased spatial resolution may improve the accuracy and reduce the cost of fuels mapping. The objective of this research is to evaluate the accuracy and utility of imagery from the Advanced Spaceborne Thermal Emission and Reflection...

Characterizing and mapping forest fire fuels using ASTER imagery and gradient modeling

Treesearch

Michael J. Falkowski; Paul E. Gessler; Penelope Morgan; Andrew T. Hudak; Alistair M. S. Smith

2005-01-01

Land managers need cost-effective methods for mapping and characterizing forest fuels quickly and accurately. The launch of satellite sensors with increased spatial resolution may improve the accuracy and reduce the cost of fuels mapping. The objective of this research is to evaluate the accuracy and utility of imagery from the advanced spaceborne thermal emission and...

Characterization of soil spatial variability for site-specific management using soil electrical conductivity and other remotely sensed data

NASA Astrophysics Data System (ADS)

Bang, Jisu

Field-scale characterization of soil spatial variability using remote sensing technology has potential for achieving the successful implementation of site-specific management (SSM). The objectives of this study were to: (i) examine the spatial relationships between apparent soil electrical conductivity (EC a) and soil chemical and physical properties to determine if EC a could be useful to characterize soil properties related to crop productivity in the Coastal Plain and Piedmont of North Carolina; (ii) evaluate the effects of in-situ soil moisture variation on ECa mapping as a basis for characterization of soil spatial variability and as a data layer in cluster analysis as a means of delineating sampling zones; (iii) evaluate clustering approaches using different variable sets for management zone delineation to characterize spatial variability in soil nutrient levels and crop yields. Studies were conducted in two fields in the Piedmont and three fields in the Coastal Plain of North Carolina. Spatial measurements of ECa via electromagnetic induction (EMI) were compared with soil chemical parameters (extractable P, K, and micronutrients; pH, cation exchange capacity [CEC], humic matter or soil organic matter; and physical parameters (percentage sand, silt, and clay; and plant-available water [PAW] content; bulk density; cone index; saturated hydraulic conductivity [Ksat] in one of the coastal plain fields) using correlation analysis across fields. We also collected ECa measurements in one coastal plain field on four days with significantly different naturally occurring soil moisture conditions measured in five increments to 0.75 m using profiling time-domain reflectometry probes to evaluate the temporal variability of ECa associated with changes in in-situ soil moisture content. Nonhierarchical k-means cluster analysis using sensor-based field attributes including vertical ECa, near-infrared (NIR) radiance of bare-soil from an aerial color infrared (CIR) image, elevation, slope, and their combinations was performed to delineate management zones. The strengths and signs of the correlations between ECa and measured soil properties varied among fields. Few strong direct correlations were found between ECa and the soil chemical and physical properties studied (r2 < 0.50), but correlations improved considerably when zone mean ECa and zone means of selected soil properties among ECa zones were compared. The results suggested that field-scale ECa survey is not able to directly predict soil nutrient levels at any specific location, but could delimit distinct zones of soil condition among which soil nutrient levels differ, providing an effective basis for soil sampling on a zone basis. (Abstract shortened by UMI.)

The effects of spatial autoregressive dependencies on inference in ordinary least squares: a geometric approach

NASA Astrophysics Data System (ADS)

Smith, Tony E.; Lee, Ka Lok

2012-01-01

There is a common belief that the presence of residual spatial autocorrelation in ordinary least squares (OLS) regression leads to inflated significance levels in beta coefficients and, in particular, inflated levels relative to the more efficient spatial error model (SEM). However, our simulations show that this is not always the case. Hence, the purpose of this paper is to examine this question from a geometric viewpoint. The key idea is to characterize the OLS test statistic in terms of angle cosines and examine the geometric implications of this characterization. Our first result is to show that if the explanatory variables in the regression exhibit no spatial autocorrelation, then the distribution of test statistics for individual beta coefficients in OLS is independent of any spatial autocorrelation in the error term. Hence, inferences about betas exhibit all the optimality properties of the classic uncorrelated error case. However, a second more important series of results show that if spatial autocorrelation is present in both the dependent and explanatory variables, then the conventional wisdom is correct. In particular, even when an explanatory variable is statistically independent of the dependent variable, such joint spatial dependencies tend to produce "spurious correlation" that results in over-rejection of the null hypothesis. The underlying geometric nature of this problem is clarified by illustrative examples. The paper concludes with a brief discussion of some possible remedies for this problem.

Stochastic Spatial Models in Ecology: A Statistical Physics Approach

NASA Astrophysics Data System (ADS)

Pigolotti, Simone; Cencini, Massimo; Molina, Daniel; Muñoz, Miguel A.

2018-07-01

Ecosystems display a complex spatial organization. Ecologists have long tried to characterize them by looking at how different measures of biodiversity change across spatial scales. Ecological neutral theory has provided simple predictions accounting for general empirical patterns in communities of competing species. However, while neutral theory in well-mixed ecosystems is mathematically well understood, spatial models still present several open problems, limiting the quantitative understanding of spatial biodiversity. In this review, we discuss the state of the art in spatial neutral theory. We emphasize the connection between spatial ecological models and the physics of non-equilibrium phase transitions and how concepts developed in statistical physics translate in population dynamics, and vice versa. We focus on non-trivial scaling laws arising at the critical dimension D = 2 of spatial neutral models, and their relevance for biological populations inhabiting two-dimensional environments. We conclude by discussing models incorporating non-neutral effects in the form of spatial and temporal disorder, and analyze how their predictions deviate from those of purely neutral theories.

Stochastic Spatial Models in Ecology: A Statistical Physics Approach

NASA Astrophysics Data System (ADS)

Pigolotti, Simone; Cencini, Massimo; Molina, Daniel; Muñoz, Miguel A.

2017-11-01

Ecosystems display a complex spatial organization. Ecologists have long tried to characterize them by looking at how different measures of biodiversity change across spatial scales. Ecological neutral theory has provided simple predictions accounting for general empirical patterns in communities of competing species. However, while neutral theory in well-mixed ecosystems is mathematically well understood, spatial models still present several open problems, limiting the quantitative understanding of spatial biodiversity. In this review, we discuss the state of the art in spatial neutral theory. We emphasize the connection between spatial ecological models and the physics of non-equilibrium phase transitions and how concepts developed in statistical physics translate in population dynamics, and vice versa. We focus on non-trivial scaling laws arising at the critical dimension D = 2 of spatial neutral models, and their relevance for biological populations inhabiting two-dimensional environments. We conclude by discussing models incorporating non-neutral effects in the form of spatial and temporal disorder, and analyze how their predictions deviate from those of purely neutral theories.

Nanoscale Characterization of Carrier Dynamic and Surface Passivation in InGaN/GaN Multiple Quantum Wells on GaN Nanorods.

PubMed

Chen, Weijian; Wen, Xiaoming; Latzel, Michael; Heilmann, Martin; Yang, Jianfeng; Dai, Xi; Huang, Shujuan; Shrestha, Santosh; Patterson, Robert; Christiansen, Silke; Conibeer, Gavin

2016-11-23

Using advanced two-photon excitation confocal microscopy, associated with time-resolved spectroscopy, we characterize InGaN/GaN multiple quantum wells on nanorod heterostructures and demonstrate the passivation effect of a KOH treatment. High-quality InGaN/GaN nanorods were fabricated using nanosphere lithography as a candidate material for light-emitting diode devices. The depth- and time-resolved characterization at the nanoscale provides detailed carrier dynamic analysis helpful for understanding the optical properties. The nanoscale spatially resolved images of InGaN quantum well and defects were acquired simultaneously. We demonstrate that nanorod etching improves light extraction efficiency, and a proper KOH treatment has been found to reduce the surface defects efficiently and enhance the luminescence. The optical characterization techniques provide depth-resolved and time-resolved carrier dynamics with nanoscale spatially resolved mapping, which is crucial for a comprehensive and thorough understanding of nanostructured materials and provides novel insight into the improvement of materials fabrication and applications.

Spatial and temporal variability of rainfall and their effects on hydrological response in urban areas - a review

NASA Astrophysics Data System (ADS)

Cristiano, Elena; ten Veldhuis, Marie-claire; van de Giesen, Nick

2017-07-01

In urban areas, hydrological processes are characterized by high variability in space and time, making them sensitive to small-scale temporal and spatial rainfall variability. In the last decades new instruments, techniques, and methods have been developed to capture rainfall and hydrological processes at high resolution. Weather radars have been introduced to estimate high spatial and temporal rainfall variability. At the same time, new models have been proposed to reproduce hydrological response, based on small-scale representation of urban catchment spatial variability. Despite these efforts, interactions between rainfall variability, catchment heterogeneity, and hydrological response remain poorly understood. This paper presents a review of our current understanding of hydrological processes in urban environments as reported in the literature, focusing on their spatial and temporal variability aspects. We review recent findings on the effects of rainfall variability on hydrological response and identify gaps where knowledge needs to be further developed to improve our understanding of and capability to predict urban hydrological response.

Characterizing and Improving Spatial Visualization Skills

ERIC Educational Resources Information Center

Titus, Sarah; Horsman, Eric

2009-01-01

Three-dimensional spatial visualization is an essential skill for geoscientists. We conducted two evaluations of students' spatial skills to examine whether their skills improve after enrollment in a geology course or courses. First, we present results of pre- and post-course survey of abstract visualization skills used to characterize the range…

Uncertainty of High Intensity Therapeutic Ultrasound (HITU) Field Characterization with Hydrophones: Effects of Nonlinearity, Spatial Averaging, and Complex Sensitivity

PubMed Central

Liu, Yunbo; Wear, Keith A.; Harris, Gerald R.

2017-01-01

Reliable acoustic characterization is fundamental for patient safety and clinical efficacy during high intensity therapeutic ultrasound (HITU) treatment. Technical challenges, such as measurement uncertainty and signal analysis still exist for HITU exposimetry using ultrasound hydrophones. In this work, four hydrophones were compared for pressure measurement: a robust needle hydrophone, a small PVDF capsule hydrophone and two different fiber-optic hydrophones. The focal waveform and beam distribution of a single element HITU transducer (1.05 MHz and 3.3 MHz) were evaluated. Complex deconvolution between the hydrophone voltage signal and frequency-dependent complex sensitivity was performed to obtain pressure waveform. Compressional pressure, rarefactional pressure, and focal beam distribution were compared up to 10.6/−6.0 MPa (p+ and p−) (1.05 MHz) and 20.65/−7.20 MPa (3.3 MHz). In particular, the effects of spatial averaging, local nonlinear distortion, complex deconvolution and hydrophone damage thresholds were investigated. This study showed an uncertainty of no better than 10–15% on hydrophone-based HITU pressure characterization. PMID:28735734

Characterization of single α-tracks by photoresist detection and AFM analysis-focus on biomedical science and technology

NASA Astrophysics Data System (ADS)

Falzone, Nadia; Myhra, Sverre; Chakalova, Radka; Hill, Mark A.; Thomson, James; Vallis, Katherine A.

2013-11-01

The interactions between energetic ions and biological and/or organic target materials have recently attracted theoretical and experimental attention, due to their implications for detector and device technologies, and for therapeutic applications. Most of the attention has focused on detection of the primary ionization tracks, and their effects, while recoil target atom tracks remain largely unexplored. Detection of tracks by a negative tone photoresist (SU-8), followed by standard development, in combination with analysis by atomic force microscopy, shows that both primary and recoil tracks are revealed as conical spikes, and can be characterized at high spatial resolution. The methodology has the potential to provide detailed information about single impact events, which may lead to more effective and informative detector technologies and advanced therapeutic procedures. In comparison with current characterization methods the advantageous features include: greater spatial resolution by an order of magnitude (20 nm) detection of single primary and associated recoil tracks; increased range of fluence (to 2.5 × 109 cm-2) sensitivity to impacts at grazing angle incidence; and better definition of the lateral interaction volume in target materials.

Variation of High-Intensity Therapeutic Ultrasound (HITU) Pressure Field Characterization: Effects of Hydrophone Choice, Nonlinearity, Spatial Averaging and Complex Deconvolution.

PubMed

Liu, Yunbo; Wear, Keith A; Harris, Gerald R

2017-10-01

Reliable acoustic characterization is fundamental for patient safety and clinical efficacy during high-intensity therapeutic ultrasound (HITU) treatment. Technical challenges, such as measurement variation and signal analysis, still exist for HITU exposimetry using ultrasound hydrophones. In this work, four hydrophones were compared for pressure measurement: a robust needle hydrophone, a small polyvinylidene fluoride capsule hydrophone and two fiberoptic hydrophones. The focal waveform and beam distribution of a single-element HITU transducer (1.05 MHz and 3.3 MHz) were evaluated. Complex deconvolution between the hydrophone voltage signal and frequency-dependent complex sensitivity was performed to obtain pressure waveforms. Compressional pressure (p + ), rarefactional pressure (p - ) and focal beam distribution were compared up to 10.6/-6.0 MPa (p + /p - ) (1.05 MHz) and 20.65/-7.20 MPa (3.3 MHz). The effects of spatial averaging, local non-linear distortion, complex deconvolution and hydrophone damage thresholds were investigated. This study showed a variation of no better than 10%-15% among hydrophones during HITU pressure characterization. Published by Elsevier Inc.

Broadband interferometric characterization of divergence and spatial chirp.

PubMed

Meier, Amanda K; Iliev, Marin; Squier, Jeff A; Durfee, Charles G

2015-09-01

We demonstrate a spectral interferometric method to characterize lateral and angular spatial chirp to optimize intensity localization in spatio-temporally focused ultrafast beams. Interference between two spatially sheared beams in an interferometer will lead to straight fringes if the wavefronts are curved. To produce reference fringes, we delay one arm relative to another in order to measure fringe rotation in the spatially resolved spectral interferogram. With Fourier analysis, we can obtain frequency-resolved divergence. In another arrangement, we spatially flip one beam relative to the other, which allows the frequency-dependent beamlet direction (angular spatial chirp) to be measured. Blocking one beam shows the spatial variation of the beamlet position with frequency (i.e., the lateral spatial chirp).

Stennis Space Center Verification & Validation Capabilities

NASA Technical Reports Server (NTRS)

Pagnutti, Mary; Ryan, Robert E.; Holekamp, Kara; O'Neal, Duane; Knowlton, Kelly; Ross, Kenton; Blonski, Slawomir

2007-01-01

Scientists within NASA#s Applied Research & Technology Project Office (formerly the Applied Sciences Directorate) have developed a well-characterized remote sensing Verification & Validation (V&V) site at the John C. Stennis Space Center (SSC). This site enables the in-flight characterization of satellite and airborne high spatial resolution remote sensing systems and their products. The smaller scale of the newer high resolution remote sensing systems allows scientists to characterize geometric, spatial, and radiometric data properties using a single V&V site. The targets and techniques used to characterize data from these newer systems can differ significantly from the techniques used to characterize data from the earlier, coarser spatial resolution systems. Scientists have used the SSC V&V site to characterize thermal infrared systems. Enhancements are being considered to characterize active lidar systems. SSC employs geodetic targets, edge targets, radiometric tarps, atmospheric monitoring equipment, and thermal calibration ponds to characterize remote sensing data products. Similar techniques are used to characterize moderate spatial resolution sensing systems at selected nearby locations. The SSC Instrument Validation Lab is a key component of the V&V capability and is used to calibrate field instrumentation and to provide National Institute of Standards and Technology traceability. This poster presents a description of the SSC characterization capabilities and examples of calibration data.

Environmental and biological characteristics of Atlantic bluefin tuna and albacore spawning habitats based on their egg distributions

NASA Astrophysics Data System (ADS)

Reglero, Patricia; Santos, Maria; Balbín, Rosa; Laíz-Carrión, Raul; Alvarez-Berastegui, Diego; Ciannelli, Lorenzo; Jiménez, Elisa; Alemany, Francisco

2017-06-01

Tuna spawning habitats are traditionally characterized using data sets of larvae or gonads from mature adults and concurrent environmental variables. Data on egg distributions have never previously been used since molecular analyses are mandatory to identify tuna eggs to species level. However, in this study we use molecularly derived egg distribution data, in addition to larval data, to characterize hydrographic and biological drivers of the spatial distribution of eggs and larvae of bluefin Thunnus thynnus and albacore tuna Thunnus alalunga in the Balearic Sea, a main spawning area of these species in the Mediterranean. The effects of the hydrography, characterized by salinity, temperature and geostrophic velocity, on the spatial distributions of the eggs and larvae are investigated. Three biological variables are used to describe the productivity in the area: chlorophyll a in the mixed layer, chlorophyll a in the deep chlorophyll maximum and mesozooplankton biomass in the mixed layer. Our results point to the importance of salinity fronts and temperatures above a minimum threshold in shaping the egg and larval distribution of both species. The spatial distribution of the biotic variables was very scattered, and they did not emerge as significant variables in the presence-absence models. However, they became significant when modeling egg and larval abundances. The lack of correlation between the three biotic variables challenges the use of chlorophyll a to describe trophic scenarios for the larvae and suggests that the spatial distribution of resources is not persistent in time. The different patterns in relation to biotic variables across species and stages found in this and other studies indicate a still elusive understanding of the link between trophic levels involving tuna early larval stages. Our ability to improve short-term forecasting and long-term predictions of climate effects on the egg and larval distributions is discussed based on the consistency of the environmentally driven spatial patterns for the two species.

Fractals and Spatial Methods for Mining Remote Sensing Imagery

NASA Technical Reports Server (NTRS)

Lam, Nina; Emerson, Charles; Quattrochi, Dale

2003-01-01

The rapid increase in digital remote sensing and GIS data raises a critical problem -- how can such an enormous amount of data be handled and analyzed so that useful information can be derived quickly? Efficient handling and analysis of large spatial data sets is central to environmental research, particularly in global change studies that employ time series. Advances in large-scale environmental monitoring and modeling require not only high-quality data, but also reliable tools to analyze the various types of data. A major difficulty facing geographers and environmental scientists in environmental assessment and monitoring is that spatial analytical tools are not easily accessible. Although many spatial techniques have been described recently in the literature, they are typically presented in an analytical form and are difficult to transform to a numerical algorithm. Moreover, these spatial techniques are not necessarily designed for remote sensing and GIS applications, and research must be conducted to examine their applicability and effectiveness in different types of environmental applications. This poses a chicken-and-egg problem: on one hand we need more research to examine the usability of the newer techniques and tools, yet on the other hand, this type of research is difficult to conduct if the tools to be explored are not accessible. Another problem that is fundamental to environmental research are issues related to spatial scale. The scale issue is especially acute in the context of global change studies because of the need to integrate remote-sensing and other spatial data that are collected at different scales and resolutions. Extrapolation of results across broad spatial scales remains the most difficult problem in global environmental research. There is a need for basic characterization of the effects of scale on image data, and the techniques used to measure these effects must be developed and implemented to allow for a multiple scale assessment of the data before any useful process-oriented modeling involving scale-dependent data can be conducted. Through the support of research grants from NASA, we have developed a software module called ICAMS (Image Characterization And Modeling System) to address the need to develop innovative spatial techniques and make them available to the broader scientific communities. ICAMS provides new spatial techniques, such as fractal analysis, geostatistical functions, and multiscale analysis that are not easily available in commercial GIS/image processing software. By bundling newer spatial methods in a user-friendly software module, researchers can begin to test and experiment with the new spatial analysis methods and they can gauge scale effects using a variety of remote sensing imagery. In the following, we describe briefly the development of ICAMS and present application examples.

Measurement Sets and Sites Commonly Used for High Spatial Resolution Image Product Characterization

NASA Technical Reports Server (NTRS)

Pagnutti, Mary

2006-01-01

Scientists within NASA's Applied Sciences Directorate have developed a well-characterized remote sensing Verification & Validation (V&V) site at the John C. Stennis Space Center (SSC). This site has enabled the in-flight characterization of satellite high spatial resolution remote sensing system products form Space Imaging IKONOS, Digital Globe QuickBird, and ORBIMAGE OrbView, as well as advanced multispectral airborne digital camera products. SSC utilizes engineered geodetic targets, edge targets, radiometric tarps, atmospheric monitoring equipment and their Instrument Validation Laboratory to characterize high spatial resolution remote sensing data products. This presentation describes the SSC characterization capabilities and techniques in the visible through near infrared spectrum and examples of calibration results.

Right Hemispatial Neglect: Frequency and Characterization Following Acute Left Hemisphere Stroke

ERIC Educational Resources Information Center

Kleinman, Jonathan T.; Newhart, Melissa; Davis, Cameron; Heidler-Gary, Jennifer; Gottesman, Rebecca F.; Hillis, Argye E.

2007-01-01

The frequency of various types of unilateral spatial neglect and associated areas of neural dysfunction after left hemisphere stroke are not well characterized. Unilateral spatial neglect (USN) in distinct spatial reference frames have been identified after acute right, but not left hemisphere stroke. We studied 47 consecutive right handed…

Multiscale imaging and characterization of the effect of mixing temperature on asphalt concrete containing recycled components.

PubMed

Cavalli, M C; Griffa, M; Bressi, S; Partl, M N; Tebaldi, G; Poulikakos, L D

2016-10-01

When producing asphalt concrete mixture with high amounts of reclaimed asphalt pavement (RAP), the mixing temperature plays a significant role in the resulting spatial distribution of the components as well as on the quality of the resulting mixture, in terms of workability during mixing and compaction as well as in service mechanical properties. Asphalt concrete containing 50% RAP was investigated at mixing temperatures of 140, 160 and 180°C, using a multiscale approach. At the microscale, using energy dispersive X-ray spectroscopy the RAP binder film thickness was visualized and measured. It was shown that at higher mixing temperatures this film thickness was reduced. The reduction in film thickness can be attributed to the loss of volatiles as well as the mixing of RAP binder with virgin binder at higher temperatures. X-ray computer tomography was used to characterize statistically the distribution of the RAP and virgin aggregates geometric features: volume, width and shape anisotropy. In addition using X-ray computer tomography, the packing and spatial distribution of the RAP and virgin aggregates was characterized using the nearest neighbour metric. It was shown that mixing temperature may have a positive effect on the spatial distribution of the aggregates but did not affect the packing. The study shows a tendency for the RAP aggregates to be more likely distributed in clusters at lower mixing temperatures. At higher temperatures, they were more homogeneously distributed. This indicates a higher degree of blending both at microscale (binder film) and macroscale (spatial distribution) between RAP and virgin aggregates as a result of increasing mixing temperatures and the ability to quantify this using various imaging techniques. © 2016 The Authors Journal of Microscopy © 2016 Royal Microscopical Society.

Spatial Correlation Of Streamflows: An Analytical Approach

NASA Astrophysics Data System (ADS)

Betterle, A.; Schirmer, M.; Botter, G.

2016-12-01

The interwoven space and time variability of climate and landscape properties results in complex and non-linear hydrological response of streamflow dynamics. Understanding how meteorologic and morphological characteristics of catchments affect similarity/dissimilarity of streamflow timeseries at their outlets represents a scientific challenge with application in water resources management, ecological studies and regionalization approaches aimed to predict streamflows in ungauged areas. In this study, we establish an analytical approach to estimate the spatial correlation of daily streamflows in two arbitrary locations within a given hydrologic district or river basin at seasonal and annual time scales. The method is based on a stochastic description of the coupled streamflow dynamics at the outlet of two catchments. The framework aims to express the correlation of daily streamflows at two locations along a river network as a function of a limited number of physical parameters characterizing the main underlying hydrological drivers, that include climate conditions, precipitation regime and catchment drainage rates. The proposed method portrays how heterogeneity of climate and landscape features affect the spatial variability of flow regimes along river systems. In particular, we show that frequency and intensity of synchronous effective rainfall events in the relevant contributing catchments are the main driver of the spatial correlation of daily discharge, whereas only pronounced differences in the drainage rate of the two basins bear a significant effect on the streamflow correlation. The topological arrangement of the two outlets also influences the underlying streamflow correlation, as we show that nested catchments tend to maximize the spatial correlation of flow regimes. The application of the method to a set of catchments in the South-Eastern US suggests the potential of the proposed tool for the characterization of spatial connections of flow regimes in the absence of discharge measurements.

Characterizing the Effects of Low Order Perturbations on Geodetic Satellite Precision Orbit Determination

DTIC Science & Technology

2015-08-07

Journal of Geodesy , Vol. 72, No. 6, 1998, pp. 333–342. [19] “Etalon-1, and -2,” http://ilrs.gsfc.nasa.gov/missions/satellite_missions...current_missions/g129_general.html, 2012. [24] L. Kanner and Associates, “Translation of ’Le satellite de geodesie ’Starlette’,’ Groupe de Recherches...de Geodesie Spatiale, Centre National d’Etudes Spatiales, Bretigny-sur-Orge, France, Report, 1974, 25 pp,” National Aeronautics and Space

The gravity of pollination: integrating at-site features into spatial analysis of contemporary pollen movement.

PubMed

DiLeo, Michelle F; Siu, Jenna C; Rhodes, Matthew K; López-Villalobos, Adriana; Redwine, Angela; Ksiazek, Kelly; Dyer, Rodney J

2014-08-01

Pollen-mediated gene flow is a major driver of spatial genetic structure in plant populations. Both individual plant characteristics and site-specific features of the landscape can modify the perceived attractiveness of plants to their pollinators and thus play an important role in shaping spatial genetic variation. Most studies of landscape-level genetic connectivity in plants have focused on the effects of interindividual distance using spatial and increasingly ecological separation, yet have not incorporated individual plant characteristics or other at-site ecological variables. Using spatially explicit simulations, we first tested the extent to which the inclusion of at-site variables influencing local pollination success improved the statistical characterization of genetic connectivity based upon examination of pollen pool genetic structure. The addition of at-site characteristics provided better models than those that only considered interindividual spatial distance (e.g. IBD). Models parameterized using conditional genetic covariance (e.g. population graphs) also outperformed those assuming panmixia. In a natural population of Cornus florida L. (Cornaceae), we showed that the addition of at-site characteristics (clumping of primary canopy opening above each maternal tree and maternal tree floral output) provided significantly better models describing gene flow than models including only between-site spatial (IBD) and ecological (isolation by resistance) variables. Overall, our results show that including interindividual and local ecological variation greatly aids in characterizing landscape-level measures of contemporary gene flow. © 2014 John Wiley & Sons Ltd.

Electronic transport characterization of silicon wafers by spatially resolved steady-state photocarrier radiometric imaging

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Qian; University of the Chinese Academy of Sciences, Beijing 100039; Li, Bincheng, E-mail: bcli@ioe.ac.cn

2015-09-28

Spatially resolved steady-state photocarrier radiometric (PCR) imaging technique is developed to characterize the electronic transport properties of silicon wafers. Based on a nonlinear PCR theory, simulations are performed to investigate the effects of electronic transport parameters (the carrier lifetime, the carrier diffusion coefficient, and the front surface recombination velocity) on the steady-state PCR intensity profiles. The electronic transport parameters of an n-type silicon wafer are simultaneously determined by fitting the measured steady-state PCR intensity profiles to the three-dimensional nonlinear PCR model. The determined transport parameters are in good agreement with the results obtained by the conventional modulated PCR technique withmore » multiple pump beam radii.« less

Linking Meteorology, Air Quality Models and Observations to ...

EPA Pesticide Factsheets

Epidemiologic studies are critical in establishing the association between exposure to air pollutants and adverse health effects. Results of epidemiologic studies are used by U.S. EPA in developing air quality standards to protect the public from the health effects of air pollutants. A major challenge in environmental epidemiology is adequate exposure characterization. Numerous health studies have used measurements from a few central-site ambient monitors to characterize air pollution exposures. Relying solely on central-site ambient monitors does not account for the spatial-heterogeneity of ambient air pollution patterns, the temporal variability in ambient concentrations, nor the influence of infiltration and indoor sources. Central-site monitoring becomes even more problematic for certain air pollutants that exhibit significant spatial heterogeneity. Statistical interpolation techniques and passive monitoring methods can provide additional spatial resolution in ambient concentration estimates. In addition, spatio-temporal models, which integrate GIS data and other factors, such as meteorology, have also been developed to produce more resolved estimates of ambient concentrations. Models, such as the Community Multi-Scale Air Quality (CMAQ) model, estimate ambient concentrations by combining information on meteorology, source emissions, and chemical-fate and transport. Hybrid modeling approaches, which integrate regional scale models with local scale dispersion

Feasibility of spatial frequency domain imaging (SFDI) for optically characterizing a preclinical oncology model.

PubMed

Tabassum, Syeda; Zhao, Yanyu; Istfan, Raeef; Wu, Junjie; Waxman, David J; Roblyer, Darren

2016-10-01

Determination of chemotherapy efficacy early during treatment would provide more opportunities for physicians to alter and adapt treatment plans. Diffuse optical technologies may be ideally suited to track early biological events following chemotherapy administration due to low cost and high information content. We evaluated the use of spatial frequency domain imaging (SFDI) to characterize a small animal tumor model in order to move towards the goal of endogenous optical monitoring of cancer therapy in a controlled preclinical setting. The effects of key measurement parameters including the choice of imaging spatial frequency and the repeatability of measurements were evaluated. The precision of SFDI optical property extractions over repeat mouse measurements was determined to be within 3.52% for move and replace experiments. Baseline optical properties and chromophore values as well as intratumor heterogeneity were evaluated over 25 tumors. Additionally, tumor growth and chemotherapy response were monitored over a 45 day longitudinal study in a small number of mice to demonstrate the ability of SFDI to track treatment effects. Optical scattering and oxygen saturation increased as much as 70% and 25% respectively in treated tumors, suggesting SFDI may be useful for preclinical tracking of cancer therapies.

Measurement Sets and Sites Commonly Used for Characterization

NASA Technical Reports Server (NTRS)

Pagnutti, Mary; Holekamp, Kara; Ryan, Robert; Sellers, Richard; Davis, Bruce; Zanoni, Vicki

2002-01-01

Scientists at NASA's Earth Science Applications Directorate are creating a well-characterized Verification & Validation (V&V) site at the Stennis Space Center. This site enables the in-flight characterization of remote sensing systems and the data they acquire. The data are predominantly acquired by commercial, high spatial resolution satellite systems, such as IKONOS and QuickBird 2, and airborne systems. The smaller scale of these newer high resolution remote sensing systems allows scientists to characterize the geometric, spatial, and radiometric data properties using a single V&V site. The targets and techniques used to characterize data from these newer systems can differ significantly from the techniques used to characterize data from the earlier, coarser spatial resolution systems. Scientists are also using the SSC V&V site to characterize thermal infrared systems and active LIDAR systems. SSC employs geodetic targets, edge targets, radiometric tarps, and thermal calibration ponds to characterize remote sensing data products. This paper presents a proposed set of required measurements for visible through long-wave infrared remote sensing systems and a description of the Stennis characterization. Other topics discussed include: 1) The use of ancillary atmospheric and solar measurements taken at SSC that support various characterizations; 2) Additional sites used for radiometric, geometric, and spatial characterization in the continental United States; 3) The need for a standardized technique to be adopted by CEOS and other organizations.

Spatial-temporal travel pattern mining using massive taxi trajectory data

NASA Astrophysics Data System (ADS)

Zheng, Linjiang; Xia, Dong; Zhao, Xin; Tan, Longyou; Li, Hang; Chen, Li; Liu, Weining

2018-07-01

Deep understanding of residents' travel patterns would provide helpful insights into the mechanisms of many socioeconomic phenomena. With the rapid development of location-aware computing technologies, researchers have easy access to large quantities of travel data. As an important data source, taxi trajectory data are featured by their high quality, good continuity and wide distribution, making it suitable for travel pattern mining. In this paper, we use taxi trajectory data to study spatial-temporal characterization of urban residents' travel patterns from two aspects: attractive areas and hot paths. Firstly, a framework of trajectory preprocessing, including data cleaning and extracting the taxi passenger pick-up/drop-off points, is presented to reduce the noise and redundancy in raw trajectory data. Then, a grid density based clustering algorithm is proposed to discover travel attractive areas in different periods of a day. On this basis, we put forward a spatial-temporal trajectory clustering method to discover hot paths among travel attractive areas. Compared with previous algorithms, which only consider the spatial constraint between trajectories, temporal constraint is also considered in our method. Through the experiments, we discuss how to determine the optimal parameters of the two clustering algorithms and verify the effectiveness of the algorithms using real data. Furthermore, we analyze spatial-temporal characterization of Chongqing residents' travel pattern.

The ampakine, Org 26576, bolsters early spatial reference learning and retrieval in the Morris water maze: a subchronic, dose-ranging study in rats.

PubMed

Hamlyn, Eugene; Brand, Linda; Shahid, Mohammed; Harvey, Brian H

2009-10-01

Ampakines have shown beneficial effects on cognition in selected animal models of learning. However, their ability to modify long-term spatial memory tasks has not been studied yet. This would lend credence to their possible value in treating disorders of cognition. We evaluated the actions of subchronic Org 26576 administration on spatial reference memory performance in the 5-day Morris water maze task in male Sprague-Dawley rats, at doses of 1, 3 and 10 mg/kg twice daily through intraperitoneal injection over 12 days. Org 26576 exerted a dose and time-dependent effect on spatial learning, with dosages of 3 and 10 mg/kg significantly enhancing acquisition on day 1. Globally, escape latency decreased significantly as the training days progressed in the saline and Org 26576-treated groups, indicating that significant and equal learning had taken place over the learning period. However, at the end of the learning period, all doses of Org 26576 significantly improved spatial memory storage/retrieval without confounding effects in the cued version of the task. Org 26576 offers early phase spatial memory benefits in rats, but particularly enhances search accuracy during reference memory retrieval. These results support its possible utility in treating disorders characterized by deficits in cognitive performance.

Spatial parameters at the basis of social transfer of learning.

PubMed

Lugli, Luisa; Iani, Cristina; Milanese, Nadia; Sebanz, Natalie; Rubichi, Sandro

2015-06-01

Recent research indicates that practicing on a joint spatial compatibility task with an incompatible stimulus-response mapping affects subsequent joint Simon task performance, eliminating the social Simon effect. It has been well established that in individual contexts, for transfer of learning to occur, participants need to practice an incompatible association between stimulus and response positions. The mechanisms underlying transfer of learning in joint task performance are, however, less well understood. The present study was aimed at assessing the relative contribution of 3 different spatial relations characterizing the joint practice context: stimulus-response, stimulus-participant, and participant-response relations. In 3 experiments, the authors manipulated the stimulus-response, stimulus-participant, and response-participant associations. We found that learning from the practice task did not transfer to the subsequent task when during practice stimulus-response associations were spatially incompatible and stimulus-participant associations were compatible (Experiment 1). However, a transfer of learning was evident when stimulus-participant associations were spatially incompatible. This occurred both when response-participant associations were incompatible (Experiment 2) and when they were compatible (Experiment 3). These results seem to support an agent corepresentation account of correspondence effects emerging in joint settings since they suggest that, in social contexts, critical to obtain transfer-of-learning effects is the spatial relation between stimulus and participant positions while the spatial relation between stimulus and response positions is irrelevant. (c) 2015 APA, all rights reserved).

Spatially varying geometric phase in classically entangled vector beams of light

NASA Astrophysics Data System (ADS)

King-Smith, Andrew; Leary, Cody

We present theoretical results describing a spatially varying geometric (Pancharatnam) phase present in vector modes of light, in which the polarization and transverse spatial mode degrees of freedom exhibit classical entanglement. We propose an experimental setup capable of characterizing this effect, in which a vector mode propagates through a Mach-Zehnder interferometer with a birefringent phase retarder present in one arm. Since the polarization state of a classically entangled light beam exhibits spatial variation across the transverse mode profile, the phase retarder gives rise to a spatially varying geometric phase in the beam propagating through it. When recombined with the reference beam from the other interferometer arm, the presence of the geometric phase is exhibited in the resulting interference pattern. We acknowledge funding from the Research Corporation for Science Advancement by means of a Cottrell College Science Award.

Fuel treatment effectiveness in forests of the upper Atlantic Coastal Plain—an evaluation at two spatial scales

Treesearch

Roger D. Ottmar; Susan J. Prichard

2012-01-01

Fuel treatment effectiveness in Southern forests has been demonstrated using fire behavior modeling and observations of reduced wildfire area and tree damage. However, assessments of treatment effectiveness may be improved with a more rigorous accounting of the fuel characteristics. We present two case studies to introduce a relatively new approach to characterizing...

How Math Anxiety Relates to Number-Space Associations.

PubMed

Georges, Carrie; Hoffmann, Danielle; Schiltz, Christine

2016-01-01

Given the considerable prevalence of math anxiety, it is important to identify the factors contributing to it in order to improve mathematical learning. Research on math anxiety typically focusses on the effects of more complex arithmetic skills. Recent evidence, however, suggests that deficits in basic numerical processing and spatial skills also constitute potential risk factors of math anxiety. Given these observations, we determined whether math anxiety also depends on the quality of spatial-numerical associations. Behavioral evidence for a tight link between numerical and spatial representations is given by the SNARC (spatial-numerical association of response codes) effect, characterized by faster left-/right-sided responses for small/large digits respectively in binary classification tasks. We compared the strength of the SNARC effect between high and low math anxious individuals using the classical parity judgment task in addition to evaluating their spatial skills, arithmetic performance, working memory and inhibitory control. Greater math anxiety was significantly associated with stronger spatio-numerical interactions. This finding adds to the recent evidence supporting a link between math anxiety and basic numerical abilities and strengthens the idea that certain characteristics of low-level number processing such as stronger number-space associations constitute a potential risk factor of math anxiety.

How Math Anxiety Relates to Number–Space Associations

PubMed Central

Georges, Carrie; Hoffmann, Danielle; Schiltz, Christine

2016-01-01

Given the considerable prevalence of math anxiety, it is important to identify the factors contributing to it in order to improve mathematical learning. Research on math anxiety typically focusses on the effects of more complex arithmetic skills. Recent evidence, however, suggests that deficits in basic numerical processing and spatial skills also constitute potential risk factors of math anxiety. Given these observations, we determined whether math anxiety also depends on the quality of spatial-numerical associations. Behavioral evidence for a tight link between numerical and spatial representations is given by the SNARC (spatial-numerical association of response codes) effect, characterized by faster left-/right-sided responses for small/large digits respectively in binary classification tasks. We compared the strength of the SNARC effect between high and low math anxious individuals using the classical parity judgment task in addition to evaluating their spatial skills, arithmetic performance, working memory and inhibitory control. Greater math anxiety was significantly associated with stronger spatio-numerical interactions. This finding adds to the recent evidence supporting a link between math anxiety and basic numerical abilities and strengthens the idea that certain characteristics of low-level number processing such as stronger number–space associations constitute a potential risk factor of math anxiety. PMID:27683570

Characterizing the Effect of Shock on Isotopic Ages I: Ferroan Anorthosite Major Elements

NASA Technical Reports Server (NTRS)

Edmunson, J.; Cohen, B. A.; Spilde, M. N.

2009-01-01

A study underway at Marshall Space Flight Center is further characterizing the effects of shock on isotopic ages. The study was inspired by the work of L. Nyquist et al. [1, 2], but goes beyond their work by investigating the spatial distribution of elements in lunar ferroan anorthosites (FANs) and magnesium-suite (Mg-suite) rocks in order to understand the processes that may influence the radioisotope ages obtained on early lunar samples. This paper discusses the first data set (major elements) obtained on FANs 62236 and 67075.

Methods used to parameterize the spatially-explicit components of a state-and-transition simulation model

USGS Publications Warehouse

Sleeter, Rachel; Acevedo, William; Soulard, Christopher E.; Sleeter, Benjamin M.

2015-01-01

Spatially-explicit state-and-transition simulation models of land use and land cover (LULC) increase our ability to assess regional landscape characteristics and associated carbon dynamics across multiple scenarios. By characterizing appropriate spatial attributes such as forest age and land-use distribution, a state-and-transition model can more effectively simulate the pattern and spread of LULC changes. This manuscript describes the methods and input parameters of the Land Use and Carbon Scenario Simulator (LUCAS), a customized state-and-transition simulation model utilized to assess the relative impacts of LULC on carbon stocks for the conterminous U.S. The methods and input parameters are spatially explicit and describe initial conditions (strata, state classes and forest age), spatial multipliers, and carbon stock density. Initial conditions were derived from harmonization of multi-temporal data characterizing changes in land use as well as land cover. Harmonization combines numerous national-level datasets through a cell-based data fusion process to generate maps of primary LULC categories. Forest age was parameterized using data from the North American Carbon Program and spatially-explicit maps showing the locations of past disturbances (i.e. wildfire and harvest). Spatial multipliers were developed to spatially constrain the location of future LULC transitions. Based on distance-decay theory, maps were generated to guide the placement of changes related to forest harvest, agricultural intensification/extensification, and urbanization. We analyze the spatially-explicit input parameters with a sensitivity analysis, by showing how LUCAS responds to variations in the model input. This manuscript uses Mediterranean California as a regional subset to highlight local to regional aspects of land change, which demonstrates the utility of LUCAS at many scales and applications.

Assessment of Near-Source Air Pollution at a Fine Spatial ...

EPA Pesticide Factsheets

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle – an all-electric vehicle measuring real-time concentrations of particulate and gaseous pollutants – was used to map air pollution levels near the Port of Charleston in South Carolina. High-resolution monitoring was performed along driving routes near several port terminals and rail yard facilities, recording geospatial coordinates and concentrations of pollutants including black carbon, size-resolved particle count ranging from ultrafine to coarse (6 nm to 20 um), carbon monoxide, carbon dioxide, and nitrogen dioxide. Additionally, a portable meteorological station was used to characterize local conditions. The primary objective of this work is to characterize the impact of port facilities on local scale air quality. It is found that elevated concentration measurements of Black Carbon and PM correlate to periods of increased port activity and a significant elevation in concentration is observed downwind of ports. However, limitations in study design prevent a more complete analysis of the port effect. As such, we discuss the ways in which this study is limited and how future work could be improved. Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollut

The nootropic and neuroprotective proline-containing dipeptide noopept restores spatial memory and increases immunoreactivity to amyloid in an Alzheimer's disease model.

PubMed

Ostrovskaya, Rita U; Gruden, Marina A; Bobkova, Natalya A; Sewell, Robert D E; Gudasheva, Tatyana A; Samokhin, Alexander N; Seredinin, Sergey B; Noppe, Wim; Sherstnev, Vladimir V; Morozova-Roche, Ludmilla A

2007-08-01

The effects of the novel proline-containing nootropic and neuroprotective dipeptide, noopept (GVS-111, N-phenylacetyl-L-prolylglycine ethyl ester) were investigated in NMRI mice following olfactory bulbectomy. We have shown previously that these animals developed Alzheimer's disease (AD)-like behaviour, morphology and biochemistry including impairment of spatial memory, regional neuronal degeneration and elevated Abeta peptide brain levels. In the current investigation, spatial memory was assessed using the Morris water maze and serum antibodies to in vitro morphologically characterized amyloid structures of both Abeta((25-35)) peptide and equine lysozyme, as well as to neurotrophic glial factor S100b, were analyzed by enzyme-linked immunosorbent assay (ELISA). Noopept (administered at a dose of 0.01 mg/kg for a period of 21 days and during a further 5 days training) restored spatial memory and increased serum antibody levels to oligomers of Abeta((25-35)) peptide but not to equine lysozyme amyloid or S100b protein in bulbectomized animals. The positive immunotropic effect of noopept to Abeta((25-35)) peptide prefibrillar aggregates was more marked in sham-operated compared to the bulbectomized subjects which were characterized by an overall suppression of immunoreactivity. Enhancement of the immune response to Abeta((25-35)) peptide prefibrils caused by noopept may attenuate the neurotoxic consequences of amyloid fibrillization and also be associated with an improvement in spatial memory in bulbectomized mice. These actions of noopept, combined with its previously reported neuroprotective and cholinomimetic properties, suggests that this dipeptide may well be useful for improving cognitive deficits induced by neurodegenerative diseases.

Mapping spatial resources with GPS animal telemetry: foraging manatees locate seagrass beds in the Ten Thousand Islands, Florida, USA

USGS Publications Warehouse

Slone, Daniel H.; Reid, James P.; Kenworthy, W. Judson

2013-01-01

Turbid water conditions make the delineation and characterization of benthic habitats difficult by traditional in situ and remote sensing methods. Here, we develop and validate modeling and sampling methodology for detecting and characterizing seagrass beds by analyzing GPS telemetry records from radio-tagged manatees. Between October 2002 and October 2005, 14 manatees were tracked in the Ten Thousand Islands (TTI) in southwest Florida (USA) using Global Positioning System (GPS) tags. High density manatee use areas were found to occur off each island facing the open, nearshore waters of the Gulf of Mexico. We implemented a spatially stratified random sampling plan and used a camera-based sampling technique to observe and record bottom observations of seagrass and macroalgae presence and abundance. Five species of seagrass were identified in our study area: Halodule wrightii, Thalassia testudinum, Syringodium filiforme, Halophila engelmannii, and Halophila decipiens. A Bayesian model was developed to choose and parameterize a spatial process function that would describe the observed patterns of seagrass and macroalgae. The seagrasses were found in depths <2 m and in the higher manatee use strata, whereas macroalgae was found at moderate densities at all sampled depths and manatee use strata. The manatee spatial data showed a strong association with seagrass beds, a relationship that increased seagrass sampling efficiency. Our camera-based field sampling proved to be effective for assessing seagrass density and spatial coverage under turbid water conditions, and would be an effective monitoring tool to detect changes in seagrass beds.

Spatial Characterization of Riparian Buffer Effects on Sediment Loads from Watershed Systems

EPA Science Inventory

Understanding all watershed systems and their interactions is a complex, but critical, undertaking when developing practices designed to reduce topsoil loss and chemical/nutrient transport from agricultural fields. The presence of riparian buffer vegetation in agricultural lands...

Measurement Sets and Sites Commonly used for Characterizations

NASA Technical Reports Server (NTRS)

Pagnutti, Mary; Holekamp, Kara; Ryan, Robert; Blonski, Slawomir; Sellers, Richard; Davis, Bruce; Zanoni, Vicki

2002-01-01

Scientists with NASA's Earth Science Applications Directorate are creating a well-characterized Verification & Validation (V&V) site at the Stennis Space Center (SSC). This site enables the in-flight characterization of remote sensing systems and the data that they require. The data are predominantly acquired by commercial, high-spatial resolution satellite systems, such as IKONOS and QuickBird 2, and airborne systems. The smaller scale of these newer high-resolution remote sensing systems allows scientists to characterize the geometric, spatial, and radiometric data properties using a single V&V site. The targets and techniques used to characterize data from these newer systems can differ significantly from the earlier, coarser spatial resolution systems. Scientists are also using the SSC V&V site to characterize thermal infrared systems and active Light Detection and Ranging (LIDAR) systems. SSC employs geodetic targets, edge targets, radiometric tarps, and thermal calibration ponds to characterize remote sensing data products. This paper presents a proposed set of required measurements for visible-through-longwave infrared remote sensing systems, and a description of the Stennis characterization. Other topics discussed inslude: 1) use of ancillary atmospheric and solar measurements taken at SSC that support various characterizations, 2) other sites used for radiometric, geometric, and spatial characterization in the continental United States,a nd 3) the need for a standardized technique to be adopted by the Committee on Earth Observation Satellites (CEOS) and other organizations.

Descriptive statistics and spatial distributions of geochemical variables associated with manganese oxide-rich phases in the northern Pacific

USGS Publications Warehouse

Botbol, Joseph Moses; Evenden, Gerald Ian

1989-01-01

Tables, graphs, and maps are used to portray the frequency characteristics and spatial distribution of manganese oxide-rich phase geochemical data, to characterize the northern Pacific in terms of publicly available nodule geochemical data, and to develop data portrayal methods that will facilitate data analysis. Source data are a subset of the Scripps Institute of Oceanography's Sediment Data Bank. The study area is bounded by 0° N., 40° N., 120° E., and 100° W. and is arbitrarily subdivided into 14-20°x20° geographic subregions. Frequency distributions of trace metals characterized in the original raw data are graphed as ogives, and salient parameters are tabulated. All variables are transformed to enrichment values relative to median concentration within their host subregions. Scatter plots of all pairs of original variables and their enrichment transforms are provided as an aid to the interpretation of correlations between variables. Gridded spatial distributions of all variables are portrayed as gray-scale maps. The use of tables and graphs to portray frequency statistics and gray-scale maps to portray spatial distributions is an effective way to prepare for and facilitate multivariate data analysis.

Tuning Spatial Profiles of Selection Pressure to Modulate the Evolution of Drug Resistance

NASA Astrophysics Data System (ADS)

De Jong, Maxwell G.; Wood, Kevin B.

2018-06-01

Spatial heterogeneity plays an important role in the evolution of drug resistance. While recent studies have indicated that spatial gradients of selection pressure can accelerate resistance evolution, much less is known about evolution in more complex spatial profiles. Here we use a stochastic toy model of drug resistance to investigate how different spatial profiles of selection pressure impact the time to fixation of a resistant allele. Using mean first passage time calculations, we show that spatial heterogeneity accelerates resistance evolution when the rate of spatial migration is sufficiently large relative to mutation but slows fixation for small migration rates. Interestingly, there exists an intermediate regime—characterized by comparable rates of migration and mutation—in which the rate of fixation can be either accelerated or decelerated depending on the spatial profile, even when spatially averaged selection pressure remains constant. Finally, we demonstrate that optimal tuning of the spatial profile can dramatically slow the spread and fixation of resistant subpopulations, even in the absence of a fitness cost for resistance. Our results may lay the groundwork for optimized, spatially resolved drug dosing strategies for mitigating the effects of drug resistance.

Evaluation of multiple-scale 3D characterization for coal physical structure with DCM method and synchrotron X-ray CT.

PubMed

Wang, Haipeng; Yang, Yushuang; Yang, Jianli; Nie, Yihang; Jia, Jing; Wang, Yudan

2015-01-01

Multiscale nondestructive characterization of coal microscopic physical structure can provide important information for coal conversion and coal-bed methane extraction. In this study, the physical structure of a coal sample was investigated by synchrotron-based multiple-energy X-ray CT at three beam energies and two different spatial resolutions. A data-constrained modeling (DCM) approach was used to quantitatively characterize the multiscale compositional distributions at the two resolutions. The volume fractions of each voxel for four different composition groups were obtained at the two resolutions. Between the two resolutions, the difference for DCM computed volume fractions of coal matrix and pores is less than 0.3%, and the difference for mineral composition groups is less than 0.17%. This demonstrates that the DCM approach can account for compositions beyond the X-ray CT imaging resolution with adequate accuracy. By using DCM, it is possible to characterize a relatively large coal sample at a relatively low spatial resolution with minimal loss of the effect due to subpixel fine length scale structures.

Characterizing local biological hotspots in the Gulf of Maine using remote sensing data

NASA Astrophysics Data System (ADS)

Ribera, Marta M.

Researchers increasingly advocate the use of ecosystem-based management (EBM) for managing complex marine ecosystems. This approach requires managers to focus on processes and cross-scale interactions, rather than individual components. However, they often lack appropriate tools and data sources to pursue this change in management approach. One method that has been proposed to understand the ecological complexity inherent in marine ecosystems is the study of biological hotspots. Biological hotspots are locations where organisms from different trophic levels aggregate to feed on abundant supplies, and they are considered a first step toward understanding the processes driving spatial and temporal heterogeneity in marine systems. Biological hotspots are supported by phytoplankton aggregations, which are characterized by high spatial and temporal variability. As a result, methods developed to locate biological hotspots in relatively stable terrestrial systems are not well suited for more dynamic marine ecosystems. The main objective of this thesis is thus to identify and characterize local-scale biological hotspots in the western side of the Gulf of Maine. The first chapter describes a new methodological framework with the steps needed to locate these types of hotspots in marine ecosystems using remote sensing datasets. Then, in the second chapter these hotspots are characterized using a novel metric that uses time series information and spatial statistics to account for both the temporal variability and spatial structure of these marine aggregations. This metric redefines biological hotspots as areas with a high probability of exhibiting positive anomalies of productivity compared to the expected regional seasonal pattern. Finally, the third chapter compares the resulting biological hotspots to fishery-dependent abundance indices of surface and benthic predators to determine the effect of the location and magnitude of phytoplankton aggregations on the rest of the ecosystem. Analyses indicate that the spatial scale and magnitude of biological hotspots in the Gulf of Maine depend on the location and time of the year. Results also show that these hotspots change over time in response to both short-term oceanographic processes and long-term climatic cycles. Finally, the new metric presented here facilitates the spatial comparison between different trophic levels, thus allowing interdisciplinary ecosystem-wide studies.

Mapping Spatial Variability of Soil Salinity in a Coastal Paddy Field Based on Electromagnetic Sensors

PubMed Central

Guo, Yan; Huang, Jingyi; Shi, Zhou; Li, Hongyi

2015-01-01

In coastal China, there is an urgent need to increase land area for agricultural production and urban development, where there is a rapid growing population. One solution is land reclamation from coastal tidelands, but soil salinization is problematic. As such, it is very important to characterize and map the within-field variability of soil salinity in space and time. Conventional methods are often time-consuming, expensive, labor-intensive, and unpractical. Fortunately, proximal sensing has become an important technology in characterizing within-field spatial variability. In this study, we employed the EM38 to study spatial variability of soil salinity in a coastal paddy field. Significant correlation relationship between ECa and EC1:5 (i.e. r >0.9) allowed us to use EM38 data to characterize the spatial variability of soil salinity. Geostatistical methods were used to determine the horizontal spatio-temporal variability of soil salinity over three consecutive years. The study found that the distribution of salinity was heterogeneous and the leaching of salts was more significant in the edges of the study field. By inverting the EM38 data using a Quasi-3D inversion algorithm, the vertical spatio-temporal variability of soil salinity was determined and the leaching of salts over time was easily identified. The methodology of this study can be used as guidance for researchers interested in understanding soil salinity development as well as land managers aiming for effective soil salinity monitoring and management practices. In order to better characterize the variations in soil salinity to a deeper soil profile, the deeper mode of EM38 (i.e., EM38v) as well as other EMI instruments (e.g. DUALEM-421) can be incorporated to conduct Quasi-3D inversions for deeper soil profiles. PMID:26020969

Mapping spatial variability of soil salinity in a coastal paddy field based on electromagnetic sensors.

PubMed

Guo, Yan; Huang, Jingyi; Shi, Zhou; Li, Hongyi

2015-01-01

In coastal China, there is an urgent need to increase land area for agricultural production and urban development, where there is a rapid growing population. One solution is land reclamation from coastal tidelands, but soil salinization is problematic. As such, it is very important to characterize and map the within-field variability of soil salinity in space and time. Conventional methods are often time-consuming, expensive, labor-intensive, and unpractical. Fortunately, proximal sensing has become an important technology in characterizing within-field spatial variability. In this study, we employed the EM38 to study spatial variability of soil salinity in a coastal paddy field. Significant correlation relationship between ECa and EC1:5 (i.e. r >0.9) allowed us to use EM38 data to characterize the spatial variability of soil salinity. Geostatistical methods were used to determine the horizontal spatio-temporal variability of soil salinity over three consecutive years. The study found that the distribution of salinity was heterogeneous and the leaching of salts was more significant in the edges of the study field. By inverting the EM38 data using a Quasi-3D inversion algorithm, the vertical spatio-temporal variability of soil salinity was determined and the leaching of salts over time was easily identified. The methodology of this study can be used as guidance for researchers interested in understanding soil salinity development as well as land managers aiming for effective soil salinity monitoring and management practices. In order to better characterize the variations in soil salinity to a deeper soil profile, the deeper mode of EM38 (i.e., EM38v) as well as other EMI instruments (e.g. DUALEM-421) can be incorporated to conduct Quasi-3D inversions for deeper soil profiles.

Evaluation of land use regression models in Detroit, Michigan

EPA Science Inventory

Introduction: Land use regression (LUR) models have emerged as a cost-effective tool for characterizing exposure in epidemiologic health studies. However, little critical attention has been focused on validation of these models as a step toward temporal and spatial extension of ...

METHODS FOR MULTI-SPATIAL SCALE CHARACTERIZATION OF RIPARIAN CORRIDORS

EPA Science Inventory

This paper describes the application of aerial photography and GIS technology to develop flexible and transferable methods for multi-spatial scale characterization and analysis of riparian corridors. Relationships between structural attributes of riparian corridors and indicator...

Sensitivity, accuracy, and precision issues in opto-electronic holography based on fiber optics and high-spatial- and high-digitial-resolution cameras

NASA Astrophysics Data System (ADS)

Furlong, Cosme; Yokum, Jeffrey S.; Pryputniewicz, Ryszard J.

2002-06-01

Sensitivity, accuracy, and precision characteristics in quantitative optical metrology techniques, and specifically in optoelectronic holography based on fiber optics and high-spatial and high-digital resolution cameras, are discussed in this paper. It is shown that sensitivity, accuracy, and precision dependent on both, the effective determination of optical phase and the effective characterization of the illumination-observation conditions. Sensitivity, accuracy, and precision are investigated with the aid of National Institute of Standards and Technology (NIST) traceable gages, demonstrating the applicability of quantitative optical metrology techniques to satisfy constantly increasing needs for the study and development of emerging technologies.

Characterizing spatial uncertainty when integrating social data in conservation planning.

PubMed

Lechner, A M; Raymond, C M; Adams, V M; Polyakov, M; Gordon, A; Rhodes, J R; Mills, M; Stein, A; Ives, C D; Lefroy, E C

2014-12-01

Recent conservation planning studies have presented approaches for integrating spatially referenced social (SRS) data with a view to improving the feasibility of conservation action. We reviewed the growing conservation literature on SRS data, focusing on elicited or stated preferences derived through social survey methods such as choice experiments and public participation geographic information systems. Elicited SRS data includes the spatial distribution of willingness to sell, willingness to pay, willingness to act, and assessments of social and cultural values. We developed a typology for assessing elicited SRS data uncertainty which describes how social survey uncertainty propagates when projected spatially and the importance of accounting for spatial uncertainty such as scale effects and data quality. These uncertainties will propagate when elicited SRS data is integrated with biophysical data for conservation planning and may have important consequences for assessing the feasibility of conservation actions. To explore this issue further, we conducted a systematic review of the elicited SRS data literature. We found that social survey uncertainty was commonly tested for, but that these uncertainties were ignored when projected spatially. Based on these results we developed a framework which will help researchers and practitioners estimate social survey uncertainty and use these quantitative estimates to systematically address uncertainty within an analysis. This is important when using SRS data in conservation applications because decisions need to be made irrespective of data quality and well characterized uncertainty can be incorporated into decision theoretic approaches. © 2014 Society for Conservation Biology.

Anomalous transport in disordered fracture networks: Spatial Markov model for dispersion with variable injection modes

NASA Astrophysics Data System (ADS)

Kang, Peter K.; Dentz, Marco; Le Borgne, Tanguy; Lee, Seunghak; Juanes, Ruben

2017-08-01

We investigate tracer transport on random discrete fracture networks that are characterized by the statistics of the fracture geometry and hydraulic conductivity. While it is well known that tracer transport through fractured media can be anomalous and particle injection modes can have major impact on dispersion, the incorporation of injection modes into effective transport modeling has remained an open issue. The fundamental reason behind this challenge is that-even if the Eulerian fluid velocity is steady-the Lagrangian velocity distribution experienced by tracer particles evolves with time from its initial distribution, which is dictated by the injection mode, to a stationary velocity distribution. We quantify this evolution by a Markov model for particle velocities that are equidistantly sampled along trajectories. This stochastic approach allows for the systematic incorporation of the initial velocity distribution and quantifies the interplay between velocity distribution and spatial and temporal correlation. The proposed spatial Markov model is characterized by the initial velocity distribution, which is determined by the particle injection mode, the stationary Lagrangian velocity distribution, which is derived from the Eulerian velocity distribution, and the spatial velocity correlation length, which is related to the characteristic fracture length. This effective model leads to a time-domain random walk for the evolution of particle positions and velocities, whose joint distribution follows a Boltzmann equation. Finally, we demonstrate that the proposed model can successfully predict anomalous transport through discrete fracture networks with different levels of heterogeneity and arbitrary tracer injection modes.

Examination of time-reversal acoustics in shallow water and applications to noncoherent underwater communications.

PubMed

Smith, Kevin B; Abrantes, Antonio A M; Larraza, Andres

2003-06-01

The shallow water acoustic communication channel is characterized by strong signal degradation caused by multipath propagation and high spatial and temporal variability of the channel conditions. At the receiver, multipath propagation causes intersymbol interference and is considered the most important of the channel distortions. This paper examines the application of time-reversal acoustic (TRA) arrays, i.e., phase-conjugated arrays (PCAs), that generate a spatio-temporal focus of acoustic energy at the receiver location, eliminating distortions introduced by channel propagation. This technique is self-adaptive and automatically compensates for environmental effects and array imperfections without the need to explicitly characterize the environment. An attempt is made to characterize the influences of a PCA design on its focusing properties with particular attention given to applications in noncoherent underwater acoustic communication systems. Due to the PCA spatial diversity focusing properties, PC arrays may have an important role in an acoustic local area network. Each array is able to simultaneously transmit different messages that will focus only at the destination receiver node.

Binary pseudo-random patterned structures for modulation transfer function calibration and resolution characterization of a full-field transmission soft x-ray microscope

DOE PAGES

Yashchuk, V. V.; Fischer, P. J.; Chan, E. R.; ...

2015-12-09

We present a modulation transfer function (MTF) calibration method based on binary pseudo-random (BPR) one-dimensional sequences and two-dimensional arrays as an effective method for spectral characterization in the spatial frequency domain of a broad variety of metrology instrumentation, including interferometric microscopes, scatterometers, phase shifting Fizeau interferometers, scanning and transmission electron microscopes, and at this time, x-ray microscopes. The inherent power spectral density of BPR gratings and arrays, which has a deterministic white-noise-like character, allows a direct determination of the MTF with a uniform sensitivity over the entire spatial frequency range and field of view of an instrument. We demonstrate themore » MTF calibration and resolution characterization over the full field of a transmission soft x-ray microscope using a BPR multilayer (ML) test sample with 2.8 nm fundamental layer thickness. We show that beyond providing a direct measurement of the microscope's MTF, tests with the BPRML sample can be used to fine tune the instrument's focal distance. Finally, our results confirm the universality of the method that makes it applicable to a large variety of metrology instrumentation with spatial wavelength bandwidths from a few nanometers to hundreds of millimeters.« less

Assessment of near-source air pollution at a fine spatial scale ...

EPA Pesticide Factsheets

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle, an all-electric vehicle measuring real-time concentrations of particulate and gaseous pollutants, was utilized to map air pollution trends near the Port of Charleston in South Carolina. High-resolution monitoring was performed along driving routes near several port terminals and rail yard facilities, recording geospatial coordinates and measurements of pollutants including black carbon, size-resolved particle count ranging from ultrafine to coarse (6 nm to 20 µm), carbon monoxide, carbon dioxide, and nitrogen dioxide. Additionally, a portable meteorological station was used to characterize local meteorology. Port activity data was provided by the Port Authority of Charleston and includes counts of ships and trucks, and port service operations such as cranes and forklifts during the sampling time periods. Measurements are supplemented with modeling performed with AERMOD and RLINE in order to characterize the impact of the various terminals at the Port of Charleston on local air quality. Specifically, the data are used to determine the magnitude of the increase in local, near-port pollutant concentrations as well as the spatial extent to which concentration is elevated above background. These effects are studied in relation to a number of potentially significant factors such

Spatial scale of land-use impacts on riverine drinking source water quality

NASA Astrophysics Data System (ADS)

Hurley, Tim; Mazumder, Asit

2013-03-01

Drinking water purveyors are increasingly relying on land conservation and management to ensure the safety of the water that they provide to consumers. To cost-effectively implement any such landscape initiatives, resources must be targeted to the appropriate spatial scale to address quality impairments of concern in a cost-effective manner. Using data gathered from 40 Canadian rivers across four ecozones, we examined the spatial scales at which land use was most closely associated with drinking source water quality metrics. Exploratory linear mixed-effects models accounting for climatic, hydrological, and physiographic variation among sites suggested that different spatial areas of land-use influence drinking source water quality depending on the parameter and season investigated. Escherichia coli spatial variability was only associated with land use at a local (5-10 km) spatial scale. Turbidity measures exhibited a complex association with land use, suggesting that the land-use areas of greatest influence can range from a 1 km subcatchment to the entire watershed depending on the season. Total organic carbon concentrations were only associated with land use characterized at the entire watershed scale. The Canadian Council of Ministers of the Environment Water Quality Index was used to calculate a composite measure of seasonal drinking source water quality but did not provide additional information beyond the analyses of individual parameters. These results suggest that entire watershed management is required to safeguard drinking water sources with more focused efforts at targeted spatial scales to reduce specific risk parameters.

Non-Invasive Methods to Characterize Soil-Plant Interactions at Different Scales

NASA Astrophysics Data System (ADS)

Javaux, M.; Kemna, A.; Muench, M.; Oberdoerster, C.; Pohlmeier, A.; Vanderborght, J.; Vereecken, H.

2006-05-01

Root water uptake is a dynamic and non-linear process, which interacts with the soil natural variability and boundary conditions to generate heterogeneous spatial distributions of soil water. Soil-root fluxes are spatially variable due to heterogeneous gradients and hydraulic connections between soil and roots. While 1-D effective representation of the root water uptake has been successfully applied to predict transpiration and average water content profiles, finer spatial characterization of the water distribution may be needed when dealing with solute transport. Indeed, root water uptake affects the water velocity field, which has an effect on solute velocity and dispersion. Although this variability originates from small-scale processes, these may still play an important role at larger scales. Therefore, in addition to investigate the variability of the soil hydraulic properties, experimental and numerical tools for characterizing root water uptake (and its effects on soil water distribution) from the pore to the field scales are needed to predict in a proper way the solute transport. Obviously, non-invasive and modeling techniques which are helpful to achieve this objective will evolve with the scale of interest. At the pore scale, soil structure and root-soil interface phenomena have to be investigated to understand the interactions between soil and roots. Magnetic resonance imaging may help to monitor water gradients and water content changes around roots while spectral induced polarization techniques may be used to characterize the structure of the pore space. At the column scale, complete root architecture of small plants and water content depletion around roots can be imaged by magnetic resonance. At that scale, models should explicitly take into account the three-dimensional gradient dependency of the root water uptake, to be able to predict solute transport. At larger scales however, simplified models, which implicitly take into account the heterogeneous root water uptake along roots, should be preferred given the complexity of the system. At such scales, electrical resistance tomography or ground-penetrating radar can be used to map the water content changes and derive effective parameters for predicting solute transport.

Directional spatial frequency analysis of lipid distribution in atherosclerotic plaque

NASA Astrophysics Data System (ADS)

Korn, Clyde; Reese, Eric; Shi, Lingyan; Alfano, Robert; Russell, Stewart

2016-04-01

Atherosclerosis is characterized by the growth of fibrous plaques due to the retention of cholesterol and lipids within the artery wall, which can lead to vessel occlusion and cardiac events. One way to evaluate arterial disease is to quantify the amount of lipid present in these plaques, since a higher disease burden is characterized by a higher concentration of lipid. Although therapeutic stimulation of reverse cholesterol transport to reduce cholesterol deposits in plaque has not produced significant results, this may be due to current image analysis methods which use averaging techniques to calculate the total amount of lipid in the plaque without regard to spatial distribution, thereby discarding information that may have significance in marking response to therapy. Here we use Directional Fourier Spatial Frequency (DFSF) analysis to generate a characteristic spatial frequency spectrum for atherosclerotic plaques from C57 Black 6 mice both treated and untreated with a cholesterol scavenging nanoparticle. We then use the Cauchy product of these spectra to classify the images with a support vector machine (SVM). Our results indicate that treated plaque can be distinguished from untreated plaque using this method, where no difference is seen using the spatial averaging method. This work has the potential to increase the effectiveness of current in-vivo methods of plaque detection that also use averaging methods, such as laser speckle imaging and Raman spectroscopy.

Airborne particle characterization by spatial scattering and fluorescence

NASA Astrophysics Data System (ADS)

Barton, John; Hirst, Edwin; Kaye, Paul; Saunders, Spencer; Clark, Don

1999-11-01

Several workers have reported the development of systems which allow the measurement of intrinsic fluorescence from particles irradiated with ultra-violet radiation. The fluorescence data are frequently recorded in conjunction with other parameters such as particle size, measured either as a function of optical scatter or as an aerodynamic size. The motivation for this work has been principally the detection of bioaerosols within an ambient environment. Previous work by the authors has shown that an analysis of the scattering profile of a particle, i.e.: the spatial distribution of light scattered by the particle carried in a sample air-stream, can provide an effective means of particle characterization and classification in terms of both size and shape parameters. Current work is aimed at the simultaneous recording of both spatial scattering and fluorescence data from individual particles with a view to substantially enhanced discrimination of biological aerosols. A prototype instrument has recently been completed which employs a cw 266 nm laser source to produce both elastic (spatial scattering) and inelastic (fluorescence) signals from individual airborne particles. The instrument incorporates a custom designed high-gain multi- pixel hybrid photodiode (HPD) to record the spatial scattering data and a single photomultiplier to record total fluorescence from the illuminated particle. Recorded data are processed to allow the classification of airborne particles on the basis of size, shape, and fluorescence for both biological and non- biological aerosols.

Exploiting MISR products at the full spatial resolution (275m) to document changes in land properties in and around the Kruger National Park, South Africa

NASA Astrophysics Data System (ADS)

Verstraete, M. M.; Hunt, L. A.; Pinty, B.; Clerici, M.; Scholes, R. J.

2009-12-01

The MISR instrument on NASA's Terra platform has been acquiring data globally and continuously for almost 10 years. A wide range of atmospheric and land products are operationally generated at the LaRC ASDC, at spatial resolutions of 1.1 km or coarser. Yet, the intrinsic spatial resolution of that sensor is 275m and 12 out of the 36 spectro-directional data channels are transmitted to the ground segment at that resolution. Recent algorithmic developments have permitted us to reconstruct reasonable estimates of the other 24 channels and to account for atmospheric effects at the full original spatial resolution. Spectro-directional reflectances have been processed to characterize the anisotropy of observed land surfaces and then optimally estimate various geophysical properties of the environment such as the fluxes of radiation in and out of plant canopies, the albedo, FAPAR, etc. These detailed products allow us to investigate ecological and environmental changes in much greater spatial and thematic detail than was previously possible. The paper outlines the various methodological steps implemented and exhibits concrete results for a region of moderate size (280 by 380 km) in South Africa. Practical downstream applications of this approach include monitoring desertification and biomass burning, documenting urbanization or characterizing the phenology of vegetation.

Spatial trends in Pearson Type III statistical parameters

USGS Publications Warehouse

Lichty, R.W.; Karlinger, M.R.

1995-01-01

Spatial trends in the statistical parameters (mean, standard deviation, and skewness coefficient) of a Pearson Type III distribution of the logarithms of annual flood peaks for small rural basins (less than 90 km2) are delineated using a climate factor CT, (T=2-, 25-, and 100-yr recurrence intervals), which quantifies the effects of long-term climatic data (rainfall and pan evaporation) on observed T-yr floods. Maps showing trends in average parameter values demonstrate the geographically varying influence of climate on the magnitude of Pearson Type III statistical parameters. The spatial trends in variability of the parameter values characterize the sensitivity of statistical parameters to the interaction of basin-runoff characteristics (hydrology) and climate. -from Authors

A far-infrared spatial/spectral Fourier interferometry laboratory-based testbed instrument

NASA Astrophysics Data System (ADS)

Spencer, Locke D.; Naylor, David A.; Scott, Jeremy P.; Weiler, Vince F.; MacCrimmon, Roderick K.; Sitwell, Geoffrey R. H.; Ade, Peter A. R.

2016-07-01

We describe the current status, including preliminary design, characterization efforts, and recent progress, in the development of a spatial/spectral double Fourier laboratory-based interferometer testbed instrument within the Astronomical Instrumentation Group (AIG) laboratories at the University of Lethbridge, Canada (UL). Supported by CRC, CFI, and NSERC grants, this instrument development will provide laboratory demonstration of spatial-spectral interferometry with a concentration of furthering progress in areas including the development of spatial/spectral interferometry observation, data processing, characterization, and analysis techniques in the Far-Infrared (FIR) region of the electromagnetic spectrum.

Fine-Scale Analysis Reveals Cryptic Landscape Genetic Structure in Desert Tortoises

PubMed Central

Latch, Emily K.; Boarman, William I.; Walde, Andrew; Fleischer, Robert C.

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately. PMID:22132143

Fine-scale analysis reveals cryptic landscape genetic structure in desert tortoises.

PubMed

Latch, Emily K; Boarman, William I; Walde, Andrew; Fleischer, Robert C

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately.

Dissociation of spatial memory systems in Williams syndrome.

PubMed

Bostelmann, Mathilde; Fragnière, Emilie; Costanzo, Floriana; Di Vara, Silvia; Menghini, Deny; Vicari, Stefano; Lavenex, Pierre; Lavenex, Pamela Banta

2017-11-01

Williams syndrome (WS), a genetic deletion syndrome, is characterized by severe visuospatial deficits affecting performance on both tabletop spatial tasks and on tasks which assess orientation and navigation. Nevertheless, previous studies of WS spatial capacities have ignored the fact that two different spatial memory systems are believed to contribute parallel spatial representations supporting navigation. The place learning system depends on the hippocampal formation and creates flexible relational representations of the environment, also known as cognitive maps. The spatial response learning system depends on the striatum and creates fixed stimulus-response representations, also known as habits. Indeed, no study assessing WS spatial competence has used tasks which selectively target these two spatial memory systems. Here, we report that individuals with WS exhibit a dissociation in their spatial abilities subserved by these two memory systems. As compared to typically developing (TD) children in the same mental age range, place learning performance was impaired in individuals with WS. In contrast, their spatial response learning performance was facilitated. Our findings in individuals with WS and TD children suggest that place learning and response learning interact competitively to control the behavioral strategies normally used to support human spatial navigation. Our findings further suggest that the neural pathways supporting place learning may be affected by the genetic deletion that characterizes WS, whereas those supporting response learning may be relatively preserved. The dissociation observed between these two spatial memory systems provides a coherent theoretical framework to characterize the spatial abilities of individuals with WS, and may lead to the development of new learning strategies based on their facilitated response learning abilities. © 2017 Wiley Periodicals, Inc.

Effects of spatial resolution and landscape structure on land cover characterization

NASA Astrophysics Data System (ADS)

Yang, Wenli

This dissertation addressed problems in scaling, problems that are among the main challenges in remote sensing. The principal objective of the research was to investigate the effects of changing spatial scale on the representation of land cover. A second objective was to determine the relationship between such effects, characteristics of landscape structure and scaling procedures. Four research issues related to spatial scaling were examined. They included: (1) the upscaling of Normalized Difference Vegetation Index (NDVI); (2) the effects of spatial scale on indices of landscape structure; (3) the representation of land cover databases at different spatial scales; and (4) the relationships between landscape indices and land cover area estimations. The overall bias resulting from non-linearity of NDVI in relation to spatial resolution is generally insignificant as compared to other factors such as influences of aerosols and water vapor. The bias is, however, related to land surface characteristics. Significant errors may be introduced in heterogeneous areas where different land cover types exhibit strong spectral contrast. Spatially upscaled SPOT and TM NDVIs have information content comparable with the AVHRR-derived NDVI. Indices of landscape structure and spatial resolution are generally related, but the exact forms of the relationships are subject to changes in other factors including the basic patch unit constituting a landscape and the proportional area of foreground land cover under consideration. The extent of agreement between spatially aggregated coarse resolution land cover datasets and full resolution datasets changes with the properties of the original datasets, including the pixel size and class definition. There are close relationships between landscape structure and class areas estimated from spatially aggregated land cover databases. The relationships, however, do not permit extension from one area to another. Inversion calibration across different geographic/ecological areas is, therefore, not feasible. Different rules govern the land cover area changes across resolutions when different upscaling methods are used. Special attention should be given to comparison between land cover maps derived using different methods.

Spatio-Temporal Structure, Path Characteristics, and Perceptual Grouping in Immediate Serial Spatial Recall

PubMed Central

De Lillo, Carlo; Kirby, Melissa; Poole, Daniel

2016-01-01

Immediate serial spatial recall measures the ability to retain sequences of locations in short-term memory and is considered the spatial equivalent of digit span. It is tested by requiring participants to reproduce sequences of movements performed by an experimenter or displayed on a monitor. Different organizational factors dramatically affect serial spatial recall but they are often confounded or underspecified. Untangling them is crucial for the characterization of working-memory models and for establishing the contribution of structure and memory capacity to spatial span. We report five experiments assessing the relative role and independence of factors that have been reported in the literature. Experiment 1 disentangled the effects of spatial clustering and path-length by manipulating the distance of items displayed on a touchscreen monitor. Long-path sequences segregated by spatial clusters were compared with short-path sequences not segregated by clusters. Recall was more accurate for sequences segregated by clusters independently from path-length. Experiment 2 featured conditions where temporal pauses were introduced between or within cluster boundaries during the presentation of sequences with the same paths. Thus, the temporal structure of the sequences was either consistent or inconsistent with a hierarchical representation based on segmentation by spatial clusters but the effect of structure could not be confounded with effects of path-characteristics. Pauses at cluster boundaries yielded more accurate recall, as predicted by a hierarchical model. In Experiment 3, the systematic manipulation of sequence structure, path-length, and presence of path-crossings of sequences showed that structure explained most of the variance, followed by the presence/absence of path-crossings, and path-length. Experiments 4 and 5 replicated the results of the previous experiments in immersive virtual reality navigation tasks where the viewpoint of the observer changed dynamically during encoding and recall. This suggested that the effects of structure in spatial span are not dependent on perceptual grouping processes induced by the aerial view of the stimulus array typically afforded by spatial recall tasks. These results demonstrate the independence of coding strategies based on structure from effects of path characteristics and perceptual grouping in immediate serial spatial recall. PMID:27891101

Effects of Fine-Scale Landscape Variability on Satellite-Derived Land Surface Temperature Products Over Sparse Vegetation Canopies

NASA Astrophysics Data System (ADS)

Powell, R. L.; Goulden, M.; Peterson, S.; Roberts, D. A.; Still, C. J.

2015-12-01

Temperature is a primary environmental control on biological systems and processes at a range of spatial and temporal scales, from controlling biochemical processes such as photosynthesis to influencing continental-scale species distribution. The Landsat satellite series provides a long record (since the mid-1980s) of relatively high spatial resolution thermal infrared (TIR) imagery, from which we derive land surface temperature (LST) grids. Here, we investigate fine spatial resolution factors that influence Landsat-derived LST over a spectrally and spatially heterogeneous landscape. We focus on paired sites (inside/outside a 1994 fire scar) within a pinyon-juniper scrubland in Southern California. The sites have nearly identical micro-meteorology and vegetation species composition, but distinctly different vegetation abundance and structure. The tower at the unburned site includes a number of in-situ imaging tools to quantify vegetation properties, including a thermal camera on a pan-tilt mount, allowing hourly characterization of landscape component temperatures (e.g., sunlit canopy, bare soil, leaf litter). We use these in-situ measurements to assess the impact of fine-scale landscape heterogeneity on estimates of LST, including sensitivity to (i) the relative abundance of component materials, (ii) directional effects due to solar and viewing geometry, (iii) duration of sunlit exposure for each compositional type, and (iv) air temperature. To scale these properties to Landsat spatial resolution (~100-m), we characterize the sub-pixel composition of landscape components (in addition to shade) by applying spectral mixture analysis (SMA) to the Landsat Operational Land Imager (OLI) spectral bands and test the sensitivity of the relationships established with the in-situ data at this coarser scale. The effects of vegetation abundance and cover height versus other controls on satellite-derived estimates of LST will be assessed by comparing estimates at the burned vs. unburned sites across multiple seasons (~30 dates).

Spatial variation in soil properties and diffuse losses between and within grassland fields with similar short-term management.

PubMed

Peukert, S; Griffith, B A; Murray, P J; Macleod, C J A; Brazier, R E

2016-07-01

One of the major challenges for agriculture is to understand the effects of agricultural practices on soil properties and diffuse pollution, to support practical farm-scale land management. Three conventionally managed grassland fields with similar short-term management, but different ploughing histories, were studied on a long-term research platform: the North Wyke Farm Platform. The aims were to (i) quantify the between-field and within-field spatial variation in soil properties by geostatistical analysis, (ii) understand the effects of soil condition (in terms of nitrogen, phosphorus and carbon contents) on the quality of discharge water and (iii) establish robust baseline data before the implementation of various grassland management scenarios. Although the fields sampled had experienced the same land use and similar management for at least 6 years, there were differences in their mean soil properties. They showed different patterns of soil spatial variation and different rates of diffuse nutrient losses to water. The oldest permanent pasture field had the largest soil macronutrient concentrations and the greatest diffuse nutrient losses. We show that management histories affect soil properties and diffuse losses. Potential gains in herbage yield or benefits in water quality might be achieved by characterizing every field or by area-specific management within fields (a form of precision agriculture for grasslands). Permanent pasture per se cannot be considered a mitigation measure for diffuse pollution. The between- and within-field soil spatial variation emphasizes the importance of baseline characterization and will enable the reliable identification of any effects of future management change on the Farm Platform. Quantification of soil and water quality in grassland fields with contrasting management histories.Considerable spatial variation in soil properties and diffuse losses between and within fields.Contrasting management histories within and between fields strongly affected soil and water quality.Careful pasture management needed: the oldest pasture transferred the most nutrients from soil to water.

Air Quality Modeling in Support of the Near-Road Exposures and Effects of Urban Air Pollutants Study (NEXUS)

EPA Science Inventory

A major challenge in traffic-related air pollution exposure studies is the lack of information regarding pollutant exposure characterization. Air quality modeling can provide spatially and temporally varying exposure estimates for examining relationships between traffic-related a...

Spatial comparability of drought characteristics and related return periods in mainland China over 1961-2013

NASA Astrophysics Data System (ADS)

Ayantobo, Olusola O.; Li, Yi; Song, Songbai; Yao, Ning

2017-07-01

The proper understanding of the spatiotemporal characteristics of multi-year droughts and return periods is important for drought risk assessment. This study evaluated and compared the spatiotemporal variations of drought characteristics and return periods within mainland China between 1961 and 2013. Standardized Precipitation Index (SPI), Standardized Precipitation Evapotranspiration Index (SPEI) and Composite Index (CI) were calculated at multiple timescales, the run theory was used for objective identification and characterization of drought events while Kendall's τ method was used to analyze their dependencies. Within the univariate framework, marginal distributions of duration, severity, and peak were derived by fitting Exponential, Weibull and GDP distributions respectively and the drought return periods was investigated and mapped. Comparison of drought indices showed that SPEI and CI performed better than SPI in delineating spatial patterns of drought characteristics. This might be attributed to the temperature effect on evapotranspiration and therefore on drought index. Considering the increasing trend in reference evapotranspiration in the 21st century, the importance of utilizing temperature-based drought index is imperative. Severe and extreme droughts occurred in the late 1990s in many places in China while persistent multi-year severe droughts occurred more frequently over North China, Northeast China, Northwest China and Southwest China. The spatial patterns showed that regions characterized by higher drought severity were associated with higher drought duration. The North China, Northwest China, and Southwest China had much longer drought durations during the 1990s and 2000s. As droughts normally cover large areas, regional drought return periods has been showed to be more effective in providing support for drought management than station based drought return periods. Studies on the spatial comparability of drought return periods across mainland China have therefore been undertaken for drought mitigation and effective utilization of water resources.

EEG-MEG Integration Enhances the Characterization of Functional and Effective Connectivity in the Resting State Network

PubMed Central

Mideksa, Kidist Gebremariam; Anwar, Abdul Rauf; Stephani, Ulrich; Deuschl, Günther; Freitag, Christine M.; Siniatchkin, Michael

2015-01-01

At the sensor level many aspects, such as spectral power, functional and effective connectivity as well as relative-power-ratio ratio (RPR) and spatial resolution have been comprehensively investigated through both electroencephalography (EEG) and magnetoencephalography (MEG). Despite this, differences between both modalities have not yet been systematically studied by direct comparison. It remains an open question as to whether the integration of EEG and MEG data would improve the information obtained from the above mentioned parameters. Here, EEG (64-channel system) and MEG (275 sensor system) were recorded simultaneously in conditions with eyes open (EO) and eyes closed (EC) in 29 healthy adults. Spectral power, functional and effective connectivity, RPR, and spatial resolution were analyzed at five different frequency bands (delta, theta, alpha, beta and gamma). Networks of functional and effective connectivity were described using a spatial filter approach called the dynamic imaging of coherent sources (DICS) followed by the renormalized partial directed coherence (RPDC). Absolute mean power at the sensor level was significantly higher in EEG than in MEG data in both EO and EC conditions. At the source level, there was a trend towards a better performance of the combined EEG+MEG analysis compared with separate EEG or MEG analyses for the source mean power, functional correlation, effective connectivity for both EO and EC. The network of coherent sources and the spatial resolution were similar for both the EEG and MEG data if they were analyzed separately. Results indicate that the combined approach has several advantages over the separate analyses of both EEG and MEG. Moreover, by a direct comparison of EEG and MEG, EEG was characterized by significantly higher values in all measured parameters in both sensor and source level. All the above conclusions are specific to the resting state task and the specific analysis used in this study to have general conclusion multi-center studies would be helpful. PMID:26509448

Stennis Space Center Verification & Validation Capabilities

NASA Technical Reports Server (NTRS)

Pagnutti, Mary; Ryan, Robert E.; Holekamp, Kara; ONeal, Duane; Knowlton, Kelly; Ross, Kenton; Blonski, Slawomir

2005-01-01

Scientists within NASA s Applied Sciences Directorate have developed a well-characterized remote sensing Verification & Validation (V&V) site at the John C. Stennis Space Center (SSC). This site enables the in-flight characterization of satellite and airborne high spatial and moderate resolution remote sensing systems and their products. The smaller scale of the newer high resolution remote sensing systems allows scientists to characterize geometric, spatial, and radiometric data properties using a single V&V site. The targets and techniques used to characterize data from these newer systems can differ significantly from the techniques used to characterize data from the earlier, coarser spatial resolution systems. Scientists are also using the SSC V&V site to characterize thermal infrared systems and active lidar systems. SSC employs geodetic targets, edge targets, radiometric tarps, atmospheric monitoring equipment, and thermal calibration ponds to characterize remote sensing data products. The SSC Instrument Validation Lab is a key component of the V&V capability and is used to calibrate field instrumentation and to provide National Institute of Standards and Technology traceability. This poster presents a description of the SSC characterization capabilities and examples of calibration data.

Validation of Satellite Retrieved Land Surface Variables

NASA Technical Reports Server (NTRS)

Lakshmi, Venkataraman; Susskind, Joel

1999-01-01

The effective use of satellite observations of the land surface is limited by the lack of high spatial resolution ground data sets for validation of satellite products. Recent large scale field experiments include FIFE, HAPEX-Sahel and BOREAS which provide us with data sets that have large spatial coverage and long time coverage. It is the objective of this paper to characterize the difference between the satellite estimates and the ground observations. This study and others along similar lines will help us in utilization of satellite retrieved data in large scale modeling studies.

Extracting temporal and spatial information from remotely sensed data for mapping wildlife habitat: Tucson

USGS Publications Warehouse

Wallace, Cynthia S.A.; Advised by Marsh, Stuart E.

2002-01-01

The research accomplished in this dissertation used both mathematical and statistical techniques to extract and evaluate measures of landscape temporal dynamics and spatial structure from remotely sensed data for the purpose of mapping wildlife habitat. By coupling the landscape measures gleaned from the remotely sensed data with various sets of animal sightings and population data, effective models of habitat preference were created.Measures of temporal dynamics of vegetation greenness as measured by National Oceanographic and Atmospheric Administration’s Advanced Very High Resolution Radiometer (AVHRR) satellite were used to effectively characterize and map season specific habitat of the Sonoran pronghorn antelope, as well as produce preliminary models of potential yellow-billed cuckoo habitat in Arizona. Various measures that capture different aspects of the temporal dynamics of the landscape were derived from AVHRR Normalized Difference Vegetation Index composite data using three main classes of calculations: basic statistics, standardized principal components analysis, and Fourier analysis. Pronghorn habitat models based on the AVHRR measures correspond visually and statistically to GIS-based models produced using data that represent detailed knowledge of ground-condition.Measures of temporal dynamics also revealed statistically significant correlations with annual estimates of elk population in selected Arizona Game Management Units, suggesting elk respond to regional environmental changes that can be measured using satellite data. Such relationships, once verified and established, can be used to help indirectly monitor the population.Measures of landscape spatial structure derived from IKONOS high spatial resolution (1-m) satellite data using geostatistics effectively map details of Sonoran pronghorn antelope habitat. Local estimates of the nugget, sill, and range variogram parameters calculated within 25 x 25-meter image windows describe the spatial autocorrelation of the image, permitting classification of all pixels into coherent units whose signature graphs exhibit a classic variogram shape. The variogram parameters captured in these signatures have been shown in previous studies to discriminate between different species-specific vegetation associations.The synoptic view of the landscape provided by satellite data can inform resource management efforts. The ability to characterize the spatial structure and temporal dynamics of habitat using repeatable remote sensing data allows closer monitoring of the relationship between a species and its landscape.

Social stressors and air pollution across New York City communities: a spatial approach for assessing correlations among multiple exposures.

PubMed

Shmool, Jessie L C; Kubzansky, Laura D; Newman, Ogonnaya Dotson; Spengler, John; Shepard, Peggy; Clougherty, Jane E

2014-11-06

Recent toxicological and epidemiological evidence suggests that chronic psychosocial stress may modify pollution effects on health. Thus, there is increasing interest in refined methods for assessing and incorporating non-chemical exposures, including social stressors, into environmental health research, towards identifying whether and how psychosocial stress interacts with chemical exposures to influence health and health disparities. We present a flexible, GIS-based approach for examining spatial patterns within and among a range of social stressors, and their spatial relationships with air pollution, across New York City, towards understanding their combined effects on health. We identified a wide suite of administrative indicators of community-level social stressors (2008-2010), and applied simultaneous autoregressive models and factor analysis to characterize spatial correlations among social stressors, and between social stressors and air pollutants, using New York City Community Air Survey (NYCCAS) data (2008-2009). Finally, we provide an exploratory ecologic analysis evaluating possible modification of the relationship between nitrogen dioxide (NO2) and childhood asthma Emergency Department (ED) visit rates by social stressors, to demonstrate how the methods used to assess stressor exposure (and/or consequent psychosocial stress) may alter model results. Administrative indicators of a range of social stressors (e.g., high crime rate, residential crowding rate) were not consistently correlated (rho = - 0.44 to 0.89), nor were they consistently correlated with indicators of socioeconomic position (rho = - 0.54 to 0.89). Factor analysis using 26 stressor indicators suggested geographically distinct patterns of social stressors, characterized by three factors: violent crime and physical disorder, crowding and poor access to resources, and noise disruption and property crimes. In an exploratory ecologic analysis, these factors were differentially associated with area-average NO2 and childhood asthma ED visits. For example, only the 'violent crime and disorder' factor was significantly associated with asthma ED visits, and only the 'crowding and resource access' factor modified the association between area-level NO2 and asthma ED visits. This spatial approach enabled quantification of complex spatial patterning and confounding between chemical and non-chemical exposures, and can inform study design for epidemiological studies of separate and combined effects of multiple urban exposures.

EMIC Wave Scale Size in the Inner Magnetosphere: Observations From the Dual Van Allen Probes

NASA Technical Reports Server (NTRS)

Blum, L. W.; Bonnell, J. W.; Agapitov, O.; Paulson, K.; Kletzing, C.

2017-01-01

Estimating the spatial scales of electromagnetic ion cyclotron (EMIC) waves is critical for quantifying their overall scattering efficiency and effects on thermal plasma, ring current, and radiation belt particles. Using measurements from the dual Van Allen Probes in 2013-2014, we characterize the spatial and temporal extents of regions of EMIC wave activity and how these depend on local time and radial distance within the inner magnetosphere. Observations are categorized into three types: waves observed by only one spacecraft, waves measured by both spacecraft simultaneously, and waves observed by both spacecraft with some time lag. Analysis reveals that dayside (and H+ band) EMIC waves more frequently span larger spatial areas, while nightside (and He+ band) waves are more often localized but can persist many hours. These investigations give insight into the nature of EMIC wave generation and support more accurate quantification of their effects on the ring current and outer radiation belt.

EMIC wave scale size in the inner magnetosphere: Observations from the dual Van Allen Probes

NASA Astrophysics Data System (ADS)

Blum, L. W.; Bonnell, J. W.; Agapitov, O.; Paulson, K.; Kletzing, C.

2017-02-01

Estimating the spatial scales of electromagnetic ion cyclotron (EMIC) waves is critical for quantifying their overall scattering efficiency and effects on thermal plasma, ring current, and radiation belt particles. Using measurements from the dual Van Allen Probes in 2013-2014, we characterize the spatial and temporal extents of regions of EMIC wave activity and how these depend on local time and radial distance within the inner magnetosphere. Observations are categorized into three types—waves observed by only one spacecraft, waves measured by both spacecraft simultaneously, and waves observed by both spacecraft with some time lag. Analysis reveals that dayside (and H+ band) EMIC waves more frequently span larger spatial areas, while nightside (and He+ band) waves are more often localized but can persist many hours. These investigations give insight into the nature of EMIC wave generation and support more accurate quantification of their effects on the ring current and outer radiation belt.

Characterizing optical properties and spatial heterogeneity of human ovarian tissue using spatial frequency domain imaging

NASA Astrophysics Data System (ADS)

Nandy, Sreyankar; Mostafa, Atahar; Kumavor, Patrick D.; Sanders, Melinda; Brewer, Molly; Zhu, Quing

2016-10-01

A spatial frequency domain imaging (SFDI) system was developed for characterizing ex vivo human ovarian tissue using wide-field absorption and scattering properties and their spatial heterogeneities. Based on the observed differences between absorption and scattering images of different ovarian tissue groups, six parameters were quantitatively extracted. These are the mean absorption and scattering, spatial heterogeneities of both absorption and scattering maps measured by a standard deviation, and a fitting error of a Gaussian model fitted to normalized mean Radon transform of the absorption and scattering maps. A logistic regression model was used for classification of malignant and normal ovarian tissues. A sensitivity of 95%, specificity of 100%, and area under the curve of 0.98 were obtained using six parameters extracted from the SFDI images. The preliminary results demonstrate the diagnostic potential of the SFDI method for quantitative characterization of wide-field optical properties and the spatial distribution heterogeneity of human ovarian tissue. SFDI could be an extremely robust and valuable tool for evaluation of the ovary and detection of neoplastic changes of ovarian cancer.

Fractal Characterization of Multitemporal Scaled Remote Sensing Data

NASA Technical Reports Server (NTRS)

Quattrochi, Dale A.; Lam, Nina Siu-Ngan; Qiu, Hong-lie

1998-01-01

Scale is an "innate" concept in geographic information systems. It is recognized as something that is intrinsic to the ingestion, storage, manipulation, analysis, modeling, and output of space and time data within a GIS purview, yet the relative meaning and ramifications of scaling spatial and temporal data from this perspective remain enigmatic. As GISs become more sophisticated as a product of more robust software and more powerful computer systems, there is an urgent need to examine the issue of scale, and its relationship to the whole body of spatiotemporal data, as imparted in GISS. Scale is fundamental to the characterization of geo-spatial data as represented in GISS, but we have relatively little insight on the effects of, or how to measure the effects of, scale in representing multiscaled data; i.e., data that are acquired in different formats (e.g., map, digital) and exist in varying spatial, temporal, and in the case of remote sensing data, radiometric, configurations. This is particularly true in the emerging era of Integrated GISs (IGIS), wherein spatial data in a variety of formats (e.g., raster, vector) are combined with multiscaled remote sensing data, capable of performing highly sophisticated space-time data analyses and modeling. Moreover, the complexities associated with the integration of multiscaled data sets in a multitude of formats are exacerbated by the confusion of what the term "scale" is from a multidisciplinary perspective; i.e., "scale" takes on significantly different meanings depending upon one's disciplinary background and spatial perspective which can lead to substantive confusion in the input, manipulation, analyses, and output of IGISs (Quattrochi, 1993). Hence, we must begin to look at the universality of scale and begin to develop the theory, methods, and techniques necessary to advance knowledge on the "Science of Scale" across a wide number of spatial disciplines that use GISs.

Spatially Resolved Quantification of Chromatin Condensation through Differential Local Rheology in Cell Nuclei Fluorescence Lifetime Imaging

PubMed Central

Spagnol, Stephen T.; Dahl, Kris Noel

2016-01-01

The linear sequence of DNA encodes access to the complete set of proteins that carry out cellular functions. Yet, much of the functionality appropriate for each cell is nested within layers of dynamic regulation and organization, including a hierarchy of chromatin structural states and spatial arrangement within the nucleus. There remain limitations in our understanding of gene expression within the context of nuclear organization from an inability to characterize hierarchical chromatin organization in situ. Here we demonstrate the use of fluorescence lifetime imaging microscopy (FLIM) to quantify and spatially resolve chromatin condensation state using cell-permeable, DNA-binding dyes (Hoechst 33342 and PicoGreen). Through in vitro and in situ experiments we demonstrate the sensitivity of fluorescence lifetime to condensation state through the mechanical effects that accompany the structural changes and are reflected through altered viscosity. The establishment of FLIM for resolving and quantifying chromatin condensation state opens the door for single-measurement mechanical studies of the nucleus and for characterizing the role of genome structure and organization in nuclear processes that accompany physiological and pathological changes. PMID:26765322

Pulling apart: new perspectives on the spatial dimensions of neighbourhood income disparities in Canadian cities

NASA Astrophysics Data System (ADS)

Breau, Sébastien; Shin, Michael; Burkhart, Nick

2018-01-01

The spatial configurations of changes in the distribution of incomes within Canada's eight largest metropolitan areas are examined using a new approach based on dynamic local indicators of spatial association. These changes are characterized by increasing spatial polarization (or divergence) between higher- and lower-income neighbourhoods in Montreal, Toronto, Ottawa-Gatineau, Calgary and Vancouver. Though patterns of spatial polarization are less pronounced in Edmonton, Winnipeg and Quebec City, several lower-income neighbourhoods in these cities nevertheless appear to be losing ground relative to other neighbourhoods. These neighbourhoods are typically characterized by higher levels of precarious employment and higher shares of visible minority and recent immigrant populations.

Observation and studies of double J / ψ production at the Tevatron

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abazov, V. M.; Abbott, B.; Acharya, B. S.

2014-12-01

We present the observation of doubly-producedmore » $$J/\\psi$$ mesons with the D0 detector at Fermilab in $$p\\bar{p}$$ collisions at $$\\sqrt{s}=1.96$$ TeV. The production cross section for both singly and doubly-produced $$J/\\psi$$ mesons is measured using a sample with an integrated luminosity of 8.1fb$$^{-1}$$. For the first time, the double $$J/\\psi$$ production cross section is separated into contributions due to single and double parton scatterings. Using these measurements, we determine the effective cross section $$\\sigma_{eff}$$, a parameter characterizing an effective spatial area of the parton-parton interactions and related to the parton spatial density inside the nucleon.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dallman, Ann Renee; Neary, Vincent Sinclair

Spatial variability of sea states is an important consideration when performing wave resource assessments and wave resource characterization studies for wave energy converter (WEC) test sites and commercial WEC deployments. This report examines the spatial variation of sea states offshore of Humboldt Bay, CA, using the wave model SWAN . The effect of depth and shoaling on bulk wave parameters is well resolved using the model SWAN with a 200 m grid. At this site, the degree of spatial variation of these bulk wave parameters, with shoaling generally perpendicular to the depth contours, is found to depend on the season.more » The variation in wave height , for example, was higher in the summer due to the wind and wave sheltering from the protruding land on the coastline north of the model domain. Ho wever, the spatial variation within an area of a potential Tier 1 WEC test site at 45 m depth and 1 square nautical mile is almost negligible; at most about 0.1 m in both winter and summer. The six wave characterization parameters recommended by the IEC 6 2600 - 101 TS were compared at several points along a line perpendicular to shore from the WEC test site . As expected, these parameters varied based on depth , but showed very similar seasonal trends.« less

Characterizing the spatial structure of endangered species habitat using geostatistical analysis of IKONOS imagery

USGS Publications Warehouse

Wallace, C.S.A.; Marsh, S.E.

2005-01-01

Our study used geostatistics to extract measures that characterize the spatial structure of vegetated landscapes from satellite imagery for mapping endangered Sonoran pronghorn habitat. Fine spatial resolution IKONOS data provided information at the scale of individual trees or shrubs that permitted analysis of vegetation structure and pattern. We derived images of landscape structure by calculating local estimates of the nugget, sill, and range variogram parameters within 25 ?? 25-m image windows. These variogram parameters, which describe the spatial autocorrelation of the 1-m image pixels, are shown in previous studies to discriminate between different species-specific vegetation associations. We constructed two independent models of pronghorn landscape preference by coupling the derived measures with Sonoran pronghorn sighting data: a distribution-based model and a cluster-based model. The distribution-based model used the descriptive statistics for variogram measures at pronghorn sightings, whereas the cluster-based model used the distribution of pronghorn sightings within clusters of an unsupervised classification of derived images. Both models define similar landscapes, and validation results confirm they effectively predict the locations of an independent set of pronghorn sightings. Such information, although not a substitute for field-based knowledge of the landscape and associated ecological processes, can provide valuable reconnaissance information to guide natural resource management efforts. ?? 2005 Taylor & Francis Group Ltd.

Simulating forest management and its effect on landscape pattern

Treesearch

Eric J. Gustafson

2017-01-01

Landscapes are characterized by their structure (the spatial arrangement of landscape elements), their ecological function (how ecological processes operate within that structure), and the dynamics of change (disturbance and recovery). Thus, understanding the dynamic nature of landscapes and predicting their future dynamics are of particular emphasis. Landscape change...

REGIONAL SOIL WATER RETENTION IN THE CONTIGUOUS US: SOURCES OF VARIABILITY AND VOLCANIC SOIL EFFECTS

EPA Science Inventory

Water retention of mineral soil is often well predicted using algorithms (pedotransfer functions) with basic soil properties but the spatial variability of these properties has not been well characterized. A further source of uncertainty is that water retention by volcanic soils...

Large scale, spatially-explicit test of the refuge strategy for delaying insecticide resistance

USDA-ARS?s Scientific Manuscript database

The refuge strategy used worldwide to delay the evolution of arthropod resistance to pesticides consists of leaving areas where a pesticide is not used near fields where the pesticide is used. Yet, empirical approaches are lacking to characterize effects of putative refuges on resistance evolution. ...

A Conceptual Framework for the Assessment of Cumulative Exposure to Air Pollution at a Fine Spatial Scale

PubMed Central

Wahida, Kihal-Talantikite; Padilla, Cindy M.; Denis, Zmirou-Navier; Olivier, Blanchard; Géraldine, Le Nir; Philippe, Quenel; Séverine, Deguen

2016-01-01

Many epidemiological studies examining long-term health effects of exposure to air pollutants have characterized exposure by the outdoor air concentrations at sites that may be distant to subjects’ residences at different points in time. The temporal and spatial mobility of subjects and the spatial scale of exposure assessment could thus lead to misclassification in the cumulative exposure estimation. This paper attempts to fill the gap regarding cumulative exposure assessment to air pollution at a fine spatial scale in epidemiological studies investigating long-term health effects. We propose a conceptual framework showing how major difficulties in cumulative long-term exposure assessment could be surmounted. We then illustrate this conceptual model on the case of exposure to NO2 following two steps: (i) retrospective reconstitution of NO2 concentrations at a fine spatial scale; and (ii) a novel approach to assigning the time-relevant exposure estimates at the census block level, using all available data on residential mobility throughout a 10- to 20-year period prior to that for which the health events are to be detected. Our conceptual framework is both flexible and convenient for the needs of different epidemiological study designs. PMID:26999170

A Conceptual Framework for the Assessment of Cumulative Exposure to Air Pollution at a Fine Spatial Scale.

PubMed

Wahida, Kihal-Talantikite; Padilla, Cindy M; Denis, Zmirou-Navier; Olivier, Blanchard; Géraldine, Le Nir; Philippe, Quenel; Séverine, Deguen

2016-03-15

Many epidemiological studies examining long-term health effects of exposure to air pollutants have characterized exposure by the outdoor air concentrations at sites that may be distant to subjects' residences at different points in time. The temporal and spatial mobility of subjects and the spatial scale of exposure assessment could thus lead to misclassification in the cumulative exposure estimation. This paper attempts to fill the gap regarding cumulative exposure assessment to air pollution at a fine spatial scale in epidemiological studies investigating long-term health effects. We propose a conceptual framework showing how major difficulties in cumulative long-term exposure assessment could be surmounted. We then illustrate this conceptual model on the case of exposure to NO₂ following two steps: (i) retrospective reconstitution of NO₂ concentrations at a fine spatial scale; and (ii) a novel approach to assigning the time-relevant exposure estimates at the census block level, using all available data on residential mobility throughout a 10- to 20-year period prior to that for which the health events are to be detected. Our conceptual framework is both flexible and convenient for the needs of different epidemiological study designs.

Quantifying the synergistic effect of the precipitation and land use on sandy desertification at county level: a case study in Naiman Banner, Northern China.

PubMed

Xiaodong, Ge; Jinren, Ni; Zhenshan, Li; Ronggui, Hu; Xin, Ming; Qing, Ye

2013-07-15

Assessing the driving forces of sandy desertification is fundamental and important for its control. It has been widely accepted that both climatic conditions and land use have great impact on sandy desertification in northern China. However, the relative role and synergistic effect of each driving force of sandy desertification are still not clear. In this paper, an indicator named as SI was defined to represent the integrated probability of sandy desertification caused by land use. A quantitative method was developed for characterizing the relative roles of annual precipitation and land use to sandy desertification in both spatial and temporal dimensions at county level. Results showed that, at county level, land use was the main cause of sandy desertification for Naiman Banner since 1987-2009. In the case of spatial dimension, the different combination of land use types decided the distribution of sandy desertification probability and finally decided the spatial pattern of bared sand land. In the case of temporal dimension, the synergistic effect of land use and precipitation highly influenced the spatial distribution of sandy desertification. Copyright © 2013 Elsevier Ltd. All rights reserved.

SPATIAL PREDICTION USING COMBINED SOURCES OF DATA

EPA Science Inventory

For improved environmental decision-making, it is important to develop new models for spatial prediction that accurately characterize important spatial and temporal patterns of air pollution. As the U .S. Environmental Protection Agency begins to use spatial prediction in the reg...

Scaling effects on spring phenology detections from MODIS data at multiple spatial resolutions over the contiguous United States

NASA Astrophysics Data System (ADS)

Peng, Dailiang; Zhang, Xiaoyang; Zhang, Bing; Liu, Liangyun; Liu, Xinjie; Huete, Alfredo R.; Huang, Wenjiang; Wang, Siyuan; Luo, Shezhou; Zhang, Xiao; Zhang, Helin

2017-10-01

Land surface phenology (LSP) has been widely retrieved from satellite data at multiple spatial resolutions, but the spatial scaling effects on LSP detection are poorly understood. In this study, we collected enhanced vegetation index (EVI, 250 m) from collection 6 MOD13Q1 product over the contiguous United States (CONUS) in 2007 and 2008, and generated a set of multiple spatial resolution EVI data by resampling 250 m to 2 × 250 m and 3 × 250 m, 4 × 250 m, …, 35 × 250 m. These EVI time series were then used to detect the start of spring season (SOS) at various spatial resolutions. Further the SOS variation across scales was examined at each coarse resolution grid (35 × 250 m ≈ 8 km, refer to as reference grid) and ecoregion. Finally, the SOS scaling effects were associated with landscape fragment, proportion of primary land cover type, and spatial variability of seasonal greenness variation within each reference grid. The results revealed the influences of satellite spatial resolutions on SOS retrievals and the related impact factors. Specifically, SOS significantly varied lineally or logarithmically across scales although the relationship could be either positive or negative. The overall SOS values averaged from spatial resolutions between 250 m and 35 × 250 m at large ecosystem regions were generally similar with a difference less than 5 days, while the SOS values within the reference grid could differ greatly in some local areas. Moreover, the standard deviation of SOS across scales in the reference grid was less than 5 days in more than 70% of area over the CONUS, which was smaller in northeastern than in southern and western regions. The SOS scaling effect was significantly associated with heterogeneity of vegetation properties characterized using land landscape fragment, proportion of primary land cover type, and spatial variability of seasonal greenness variation, but the latter was the most important impact factor.

Fast and effective characterization of 3D region of interest in medical image data

NASA Astrophysics Data System (ADS)

Kontos, Despina; Megalooikonomou, Vasileios

2004-05-01

We propose a framework for detecting, characterizing and classifying spatial Regions of Interest (ROIs) in medical images, such as tumors and lesions in MRI or activation regions in fMRI. A necessary step prior to classification is efficient extraction of discriminative features. For this purpose, we apply a characterization technique especially designed for spatial ROIs. The main idea of this technique is to extract a k-dimensional feature vector using concentric spheres in 3D (or circles in 2D) radiating out of the ROI's center of mass. These vectors form characterization signatures that can be used to represent the initial ROIs. We focus on classifying fMRI ROIs obtained from a study that explores neuroanatomical correlates of semantic processing in Alzheimer's disease (AD). We detect a ROI highly associated with AD and apply the feature extraction technique with different experimental settings. We seek to distinguish control from patient samples. We study how classification can be performed using the extracted signatures as well as how different experimental parameters affect classification accuracy. The obtained classification accuracy ranged from 82% to 87% (based on the selected ROI) suggesting that the proposed classification framework can be potentially useful in supporting medical decision-making.

Characterizing the spatial distribution of multiple pollutants and populations at risk in Atlanta, Georgia.

PubMed

Pearce, John L; Waller, Lance A; Sarnat, Stefanie E; Chang, Howard H; Klein, Mitch; Mulholland, James A; Tolbert, Paige E

2016-08-01

Exposure metrics that identify spatial contrasts in multipollutant air quality are needed to better understand multipollutant geographies and health effects from air pollution. Our aim is to improve understanding of: (1) long-term spatial distributions of multiple pollutants; and (2) demographic characteristics of populations residing within areas of differing air quality. We obtained average concentrations for ten air pollutants (p=10) across a 12 km grid (n=253) covering Atlanta, Georgia for 2002-2008. We apply a self-organizing map (SOM) to our data to derive multipollutant patterns observed across our grid and classify locations under their most similar pattern (i.e, multipollutant spatial type (MST)). Finally, we geographically map classifications to delineate regions of similar multipollutant characteristics and characterize associated demographics. We found six MSTs well describe our data, with profiles highlighting a range of combinations, from locations experiencing generally clean air to locations experiencing conditions that were relatively dirty. Mapping MSTs highlighted that downtown areas were dominated by primary pollution and that suburban areas experienced relatively higher levels of secondary pollution. Demographics show the largest proportion of the overall population resided in downtown locations experiencing higher levels of primary pollution. Moreover, higher proportions of nonwhites and children in poverty reside in these areas when compared to suburban populations that resided in areas exhibiting relatively lower pollution. Our approach reveals the nature and spatial distribution of differential pollutant combinations across urban environments and provides helpful insights for identifying spatial exposure and demographic contrasts for future health studies. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

Spatial Resolution Characterization for QuickBird Image Products 2003-2004 Season

NASA Technical Reports Server (NTRS)

Blonski, Slawomir

2006-01-01

This presentation focuses on spatial resolution characterization for QuickBird panochromatic images in 2003-2004 and presents data measurements and analysis of SSC edge target deployment and edge response extraction and modeling. The results of the characterization are shown as values of the Modulation Transfer Function (MTF) at the Nyquist spatial frequency and as the Relative Edge Response (RER) components. The results show that RER is much less sensitive to accuracy of the curve fitting than the value of MTF at Nyquist frequency. Therefore, the RER/edge response slope is a more robust estimator of the digital image spatial resolution than the MTF. For the QuickBird panochromatic images, the RER is consistently equal to 0.5 for images processed with the Cubic Convolution resampling and to 0.8 for the MTF resampling.

Macroecological factors shape local-scale spatial patterns in agriculturalist settlements.

PubMed

Tao, Tingting; Abades, Sebastián; Teng, Shuqing; Huang, Zheng Y X; Reino, Luís; Chen, Bin J W; Zhang, Yong; Xu, Chi; Svenning, Jens-Christian

2017-11-15

Macro-scale patterns of human systems ranging from population distribution to linguistic diversity have attracted recent attention, giving rise to the suggestion that macroecological rules shape the assembly of human societies. However, in which aspects the geography of our own species is shaped by macroecological factors remains poorly understood. Here, we provide a first demonstration that macroecological factors shape strong local-scale spatial patterns in human settlement systems, through an analysis of spatial patterns in agriculturalist settlements in eastern mainland China based on high-resolution Google Earth images. We used spatial point pattern analysis to show that settlement spatial patterns are characterized by over-dispersion at fine spatial scales (0.05-1.4 km), consistent with territory segregation, and clumping at coarser spatial scales beyond the over-dispersion signals, indicating territorial clustering. Statistical modelling shows that, at macroscales, potential evapotranspiration and topographic heterogeneity have negative effects on territory size, but positive effects on territorial clustering. These relationships are in line with predictions from territory theory for hunter-gatherers as well as for many animal species. Our results help to disentangle the complex interactions between intrinsic spatial processes in agriculturalist societies and external forcing by macroecological factors. While one may speculate that humans can escape ecological constraints because of unique abilities for environmental modification and globalized resource transportation, our work highlights that universal macroecological principles still shape the geography of current human agricultural societies. © 2017 The Author(s).

Spatio-Temporal Variability of Groundwater Storage in India

NASA Technical Reports Server (NTRS)

Bhanja, Soumendra; Rodell, Matthew; Li, Bailing; Mukherjee, Abhijit

2016-01-01

Groundwater level measurements from 3907 monitoring wells, distributed within 22 major river basins of India, are assessed to characterize their spatial and temporal variability. Ground water storage (GWS) anomalies (relative to the long-term mean) exhibit strong seasonality, with annual maxima observed during the monsoon season and minima during pre-monsoon season. Spatial variability of GWS anomalies increases with the extent of measurements, following the power law relationship, i.e., log-(spatial variability) is linearly dependent on log-(spatial extent).In addition, the impact of well spacing on spatial variability and the power law relationship is investigated. We found that the mean GWS anomaly sampled at a 0.25 degree grid scale closes to unweighted average over all wells. The absolute error corresponding to each basin grows with increasing scale, i.e., from 0.25 degree to 1 degree. It was observed that small changes in extent could create very large changes in spatial variability at large grid scales. Spatial variability of GWS anomaly has been found to vary with climatic conditions. To our knowledge, this is the first study of the effects of well spacing on groundwater spatial variability. The results may be useful for interpreting large scale groundwater variations from unevenly spaced or sparse groundwater well observations or for siting and prioritizing wells in a network for groundwater management. The output of this study could be used to maintain a cost effective groundwater monitoring network in the study region and the approach can also be used in other parts of the globe.

Spatio-temporal variability of groundwater storage in India.

PubMed

Bhanja, Soumendra N; Rodell, Matthew; Li, Bailing; Mukherjee, Abhijit

2017-01-01

Groundwater level measurements from 3907 monitoring wells, distributed within 22 major river basins of India, are assessed to characterize their spatial and temporal variability. Groundwater storage (GWS) anomalies (relative to the long-term mean) exhibit strong seasonality, with annual maxima observed during the monsoon season and minima during pre-monsoon season. Spatial variability of GWS anomalies increases with the extent of measurements, following the power law relationship, i.e., log-(spatial variability) is linearly dependent on log-(spatial extent). In addition, the impact of well spacing on spatial variability and the power law relationship is investigated. We found that the mean GWS anomaly sampled at a 0.25 degree grid scale closes to unweighted average over all wells. The absolute error corresponding to each basin grows with increasing scale, i.e., from 0.25 degree to 1 degree. It was observed that small changes in extent could create very large changes in spatial variability at large grid scales. Spatial variability of GWS anomaly has been found to vary with climatic conditions. To our knowledge, this is the first study of the effects of well spacing on groundwater spatial variability. The results may be useful for interpreting large scale groundwater variations from unevenly spaced or sparse groundwater well observations or for siting and prioritizing wells in a network for groundwater management. The output of this study could be used to maintain a cost effective groundwater monitoring network in the study region and the approach can also be used in other parts of the globe.

Digital Mapping of Soil Salinity and Crop Yield across a Coastal Agricultural Landscape Using Repeated Electromagnetic Induction (EMI) Surveys

PubMed Central

Yao, Rongjiang; Yang, Jingsong; Wu, Danhua; Xie, Wenping; Gao, Peng; Jin, Wenhui

2016-01-01

Reliable and real-time information on soil and crop properties is important for the development of management practices in accordance with the requirements of a specific soil and crop within individual field units. This is particularly the case in salt-affected agricultural landscape where managing the spatial variability of soil salinity is essential to minimize salinization and maximize crop output. The primary objectives were to use linear mixed-effects model for soil salinity and crop yield calibration with horizontal and vertical electromagnetic induction (EMI) measurements as ancillary data, to characterize the spatial distribution of soil salinity and crop yield and to verify the accuracy of spatial estimation. Horizontal and vertical EMI (type EM38) measurements at 252 locations were made during each survey, and root zone soil samples and crop samples at 64 sampling sites were collected. This work was periodically conducted on eight dates from June 2012 to May 2013 in a coastal salt-affected mud farmland. Multiple linear regression (MLR) and restricted maximum likelihood (REML) were applied to calibrate root zone soil salinity (ECe) and crop annual output (CAO) using ancillary data, and spatial distribution of soil ECe and CAO was generated using digital soil mapping (DSM) and the precision of spatial estimation was examined using the collected meteorological and groundwater data. Results indicated that a reduced model with EMh as a predictor was satisfactory for root zone ECe calibration, whereas a full model with both EMh and EMv as predictors met the requirement of CAO calibration. The obtained distribution maps of ECe showed consistency with those of EMI measurements at the corresponding time, and the spatial distribution of CAO generated from ancillary data showed agreement with that derived from raw crop data. Statistics of jackknifing procedure confirmed that the spatial estimation of ECe and CAO exhibited reliability and high accuracy. A general increasing trend of ECe was observed and moderately saline and very saline soils were predominant during the survey period. The temporal dynamics of root zone ECe coincided with those of daily rainfall, water table and groundwater data. Long-range EMI surveys and data collection are needed to capture the spatial and temporal variability of soil and crop parameters. Such results allowed us to conclude that, cost-effective and efficient EMI surveys, as one part of multi-source data for DSM, could be successfully used to characterize the spatial variability of soil salinity, to monitor the spatial and temporal dynamics of soil salinity, and to spatially estimate potential crop yield. PMID:27203697

Digital Mapping of Soil Salinity and Crop Yield across a Coastal Agricultural Landscape Using Repeated Electromagnetic Induction (EMI) Surveys.

PubMed

Yao, Rongjiang; Yang, Jingsong; Wu, Danhua; Xie, Wenping; Gao, Peng; Jin, Wenhui

2016-01-01

Reliable and real-time information on soil and crop properties is important for the development of management practices in accordance with the requirements of a specific soil and crop within individual field units. This is particularly the case in salt-affected agricultural landscape where managing the spatial variability of soil salinity is essential to minimize salinization and maximize crop output. The primary objectives were to use linear mixed-effects model for soil salinity and crop yield calibration with horizontal and vertical electromagnetic induction (EMI) measurements as ancillary data, to characterize the spatial distribution of soil salinity and crop yield and to verify the accuracy of spatial estimation. Horizontal and vertical EMI (type EM38) measurements at 252 locations were made during each survey, and root zone soil samples and crop samples at 64 sampling sites were collected. This work was periodically conducted on eight dates from June 2012 to May 2013 in a coastal salt-affected mud farmland. Multiple linear regression (MLR) and restricted maximum likelihood (REML) were applied to calibrate root zone soil salinity (ECe) and crop annual output (CAO) using ancillary data, and spatial distribution of soil ECe and CAO was generated using digital soil mapping (DSM) and the precision of spatial estimation was examined using the collected meteorological and groundwater data. Results indicated that a reduced model with EMh as a predictor was satisfactory for root zone ECe calibration, whereas a full model with both EMh and EMv as predictors met the requirement of CAO calibration. The obtained distribution maps of ECe showed consistency with those of EMI measurements at the corresponding time, and the spatial distribution of CAO generated from ancillary data showed agreement with that derived from raw crop data. Statistics of jackknifing procedure confirmed that the spatial estimation of ECe and CAO exhibited reliability and high accuracy. A general increasing trend of ECe was observed and moderately saline and very saline soils were predominant during the survey period. The temporal dynamics of root zone ECe coincided with those of daily rainfall, water table and groundwater data. Long-range EMI surveys and data collection are needed to capture the spatial and temporal variability of soil and crop parameters. Such results allowed us to conclude that, cost-effective and efficient EMI surveys, as one part of multi-source data for DSM, could be successfully used to characterize the spatial variability of soil salinity, to monitor the spatial and temporal dynamics of soil salinity, and to spatially estimate potential crop yield.

Effects of spatial habitat heterogeneity on habitat selection and annual fecundity for a migratory forest songbird

USGS Publications Warehouse

Cornell, K.L.; Donovan, T.M.

2010-01-01

Understanding how spatial habitat patterns influence abundance and dynamics of animal populations is a primary goal in landscape ecology. We used an information-theoretic approach to investigate the association between habitat patterns at multiple spatial scales and demographic patterns for black-throated blue warblers (Dendroica caerulescens) at 20 study sites in west-central Vermont, USA from 2002 to 2005. Sites were characterized by: (1) territory-scale shrub density, (2) patch-scale shrub density occurring within 25 ha of territories, and (3) landscape-scale habitat patterns occurring within 5 km radius extents of territories. We considered multiple population parameters including abundance, age ratios, and annual fecundity. Territory-scale shrub density was most important for determining abundance and age ratios, but landscape-scale habitat structure strongly influenced reproductive output. Sites with higher territory-scale shrub density had higher abundance, and were more likely to be occupied by older, more experienced individuals compared to sites with lower shrub density. However, annual fecundity was higher on sites located in contiguously forested landscapes where shrub density was lower than the fragmented sites. Further, effects of habitat pattern at one spatial scale depended on habitat conditions at different scales. For example, abundance increased with increasing territory-scale shrub density, but this effect was much stronger in fragmented landscapes than in contiguously forested landscapes. These results suggest that habitat pattern at different spatial scales affect demographic parameters in different ways, and that effects of habitat patterns at one spatial scale depends on habitat conditions at other scales. ?? Springer Science+Business Media B.V. 2009.

[Spatial distribution pattern of Chilo suppressalis analyzed by classical method and geostatistics].

PubMed

Yuan, Zheming; Fu, Wei; Li, Fangyi

2004-04-01

Two original samples of Chilo suppressalis and their grid, random and sequence samples were analyzed by classical method and geostatistics to characterize the spatial distribution pattern of C. suppressalis. The limitations of spatial distribution analysis with classical method, especially influenced by the original position of grid, were summarized rather completely. On the contrary, geostatistics characterized well the spatial distribution pattern, congregation intensity and spatial heterogeneity of C. suppressalis. According to geostatistics, the population was up to Poisson distribution in low density. As for higher density population, its distribution was up to aggregative, and the aggregation intensity and dependence range were 0.1056 and 193 cm, respectively. Spatial heterogeneity was also found in the higher density population. Its spatial correlativity in line direction was more closely than that in row direction, and the dependence ranges in line and row direction were 115 and 264 cm, respectively.

The Landscape Framework for the Spatial Characterization and Mapping of Ecosystem Services: What is the State of the Science?

EPA Science Inventory

Ecosystem services (ESS) represent an ecosystems capacity for satisfying essential human needs, directly or indirectly, above that required to maintain ecosystem integrity (structure, function and processes). The spatial characterization and mapping of ESS is an essential first s...

CHARACTERIZING SPATIAL AND TEMPORAL DYNAMICS: DEVELOPMENT OF A GRID-BASED WATERSHED MERCURY LOADING MODEL

EPA Science Inventory

A distributed grid-based watershed mercury loading model has been developed to characterize spatial and temporal dynamics of mercury from both point and non-point sources. The model simulates flow, sediment transport, and mercury dynamics on a daily time step across a diverse lan...

Full 2D observation of water surface elevation from SWOT under different flow conditions

NASA Astrophysics Data System (ADS)

Domeneghetti, Alessio; Schumann, Guy; Rui, Wei; Durand, Michael; Pavelsky, Tamlin

2016-04-01

The upcoming Surface Water and Ocean Topography (SWOT) satellite mission is a joint project of NASA, Centre National d'Etudes Spatiales (CNES, France), the Canadian Space Agency, and the Space Agency of the UK that will provide a first global, high-resolution observation of ocean and terrestrial water surface heights. Characterized by an observation swath of 120 km and an orbit repeat interval of about 21 days, SWOT will provide unprecedented bi-dimensional observations of rivers wider than 50-100 m. Despite many research activities that have investigated potential uses of remotely sensed data from SWOT, potentials and limitations of the spatial observations provided by the satellite mission for flood modeling still remain poorly understood and investigated. In this study we present a first analysis of the spatial observation of water surface elevation that is expected from SWOT for a 140 km reach of the middle-lower portion of the Po River, in Northern Italy. The river stretch is characterized by a main channel varying from 200-500 m in width and a floodplain that can be as wide as 5 km and that is delimited by a system of major embankments. The reconstruction of the hydraulic behavior of the Po River is performed by means of a quasi-2d model built with detailed topographic and bathymetric information (LiDAR, 2 m resolution), while the simulation of the spatial observation sensed by SWOT is performed with a SWOT simulator that mimics the satellite sensor characteristics. Referring to water surface elevations associated with different flow conditions (maximum, minimum and average flow reproduced by means of the quasi-2d numerical model) this work provides a first characterization of the spatial observations provided by SWOT and highlights the strengths and limitations of the expected products. By referring to a real river reach the analysis provides a credible example of the type of spatial observations that will be available after launch of SWOT and offers a first evaluation of the possible effects of river embankments, river width and river topography under different hydraulic conditions. Results of the study characterize the expected accuracy of the upcoming SWOT mission and provide additional insights towards more appropriate exploitation of future potential hydrologic data.

The effects of context on multidimensional spatial cognitive models. Ph.D. Thesis - Arizona Univ.

NASA Technical Reports Server (NTRS)

Dupnick, E. G.

1979-01-01

Spatial cognitive models obtained by multidimensional scaling represent cognitive structure by defining alternatives as points in a coordinate space based on relevant dimensions such that interstimulus dissimilarities perceived by the individual correspond to distances between the respective alternatives. The dependence of spatial models on the context of the judgments required of the individual was investigated. Context, which is defined as a perceptual interpretation and cognitive understanding of a judgment situation, was analyzed and classified with respect to five characteristics: physical environment, social environment, task definition, individual perspective, and temporal setting. Four experiments designed to produce changes in the characteristics of context and to test the effects of these changes upon individual cognitive spaces are described with focus on experiment design, objectives, statistical analysis, results, and conclusions. The hypothesis is advanced that an individual can be characterized as having a master cognitive space for a set of alternatives. When the context changes, the individual appears to change the dimension weights to give a new spatial configuration. Factor analysis was used in the interpretation and labeling of cognitive space dimensions.

Mapping the Spread of Methamphetamine Abuse in California From 1995 to 2008

PubMed Central

Ponicki, William R.; Remer, Lillian G.; Waller, Lance A.; Zhu, Li; Gorman, Dennis M.

2013-01-01

Objectives. From 1983 to 2008, the incidence of methamphetamine abuse and dependence (MA) presenting at hospitals in California increased 13-fold. We assessed whether this growth could be characterized as a drug epidemic. Methods. We geocoded MA discharges to residential zip codes from 1995 through 2008. We related discharges to population and environmental characteristics using Bayesian Poisson conditional autoregressive models, correcting for small area effects and spatial misalignment and enabling an assessment of contagion between areas. Results. MA incidence increased exponentially in 3 phases interrupted by implementation of laws limiting access to methamphetamine precursors. MA growth from 1999 through 2008 was 17% per year. MA was greatest in areas with larger White or Hispanic low-income populations, small household sizes, and good connections to highway systems. Spatial misalignment was a source of bias in estimated effects. Spatial autocorrelation was substantial, accounting for approximately 80% of error variance in the model. Conclusions. From 1995 through 2008, MA exhibited signs of growth and spatial spread characteristic of drug epidemics, spreading most rapidly through low-income White and Hispanic populations living outside dense urban areas. PMID:23078474

BATMAN: Bayesian Technique for Multi-image Analysis

NASA Astrophysics Data System (ADS)

Casado, J.; Ascasibar, Y.; García-Benito, R.; Guidi, G.; Choudhury, O. S.; Bellocchi, E.; Sánchez, S. F.; Díaz, A. I.

2017-04-01

This paper describes the Bayesian Technique for Multi-image Analysis (BATMAN), a novel image-segmentation technique based on Bayesian statistics that characterizes any astronomical data set containing spatial information and performs a tessellation based on the measurements and errors provided as input. The algorithm iteratively merges spatial elements as long as they are statistically consistent with carrying the same information (I.e. identical signal within the errors). We illustrate its operation and performance with a set of test cases including both synthetic and real integral-field spectroscopic data. The output segmentations adapt to the underlying spatial structure, regardless of its morphology and/or the statistical properties of the noise. The quality of the recovered signal represents an improvement with respect to the input, especially in regions with low signal-to-noise ratio. However, the algorithm may be sensitive to small-scale random fluctuations, and its performance in presence of spatial gradients is limited. Due to these effects, errors may be underestimated by as much as a factor of 2. Our analysis reveals that the algorithm prioritizes conservation of all the statistically significant information over noise reduction, and that the precise choice of the input data has a crucial impact on the results. Hence, the philosophy of BaTMAn is not to be used as a 'black box' to improve the signal-to-noise ratio, but as a new approach to characterize spatially resolved data prior to its analysis. The source code is publicly available at http://astro.ft.uam.es/SELGIFS/BaTMAn.

MWIR imaging spectrometer with digital time delay integration for remote sensing and characterization of solar system objects

NASA Astrophysics Data System (ADS)

Kendrick, Stephen E.; Harwit, Alex; Kaplan, Michael; Smythe, William D.

2007-09-01

An MWIR TDI (Time Delay and Integration) Imager and Spectrometer (MTIS) instrument for characterizing from orbit the moons of Jupiter and Saturn is proposed. Novel to this instrument is the planned implementation of a digital TDI detector array and an innovative imaging/spectroscopic architecture. Digital TDI enables a higher SNR for high spatial resolution surface mapping of Titan and Enceladus and for improved spectral discrimination and resolution at Europa. The MTIS imaging/spectroscopic architecture combines a high spatial resolution coarse wavelength resolution imaging spectrometer with a hyperspectral sensor to spectrally decompose a portion of the data adjacent to the data sampled in the imaging spectrometer. The MTIS instrument thus maps with high spatial resolution a planetary object while spectrally decomposing enough of the data that identification of the constituent materials is highly likely. Additionally, digital TDI systems have the ability to enable the rejection of radiation induced spikes in high radiation environments (Europa) and the ability to image in low light levels (Titan and Enceladus). The ability to image moving objects that might be missed utilizing a conventional TDI system is an added advantage and is particularly important for characterizing atmospheric effects and separating atmospheric and surface components. This can be accomplished with on-orbit processing or collecting and returning individual non co-added frames.

An invariability-area relationship sheds new light on the spatial scaling of ecological stability.

PubMed

Wang, Shaopeng; Loreau, Michel; Arnoldi, Jean-Francois; Fang, Jingyun; Rahman, K Abd; Tao, Shengli; de Mazancourt, Claire

2017-05-19

The spatial scaling of stability is key to understanding ecological sustainability across scales and the sensitivity of ecosystems to habitat destruction. Here we propose the invariability-area relationship (IAR) as a novel approach to investigate the spatial scaling of stability. The shape and slope of IAR are largely determined by patterns of spatial synchrony across scales. When synchrony decays exponentially with distance, IARs exhibit three phases, characterized by steeper increases in invariability at both small and large scales. Such triphasic IARs are observed for primary productivity from plot to continental scales. When synchrony decays as a power law with distance, IARs are quasilinear on a log-log scale. Such quasilinear IARs are observed for North American bird biomass at both species and community levels. The IAR provides a quantitative tool to predict the effects of habitat loss on population and ecosystem stability and to detect regime shifts in spatial ecological systems, which are goals of relevance to conservation and policy.

Spatial networks

NASA Astrophysics Data System (ADS)

Barthélemy, Marc

2011-02-01

Complex systems are very often organized under the form of networks where nodes and edges are embedded in space. Transportation and mobility networks, Internet, mobile phone networks, power grids, social and contact networks, and neural networks, are all examples where space is relevant and where topology alone does not contain all the information. Characterizing and understanding the structure and the evolution of spatial networks is thus crucial for many different fields, ranging from urbanism to epidemiology. An important consequence of space on networks is that there is a cost associated with the length of edges which in turn has dramatic effects on the topological structure of these networks. We will thoroughly explain the current state of our understanding of how the spatial constraints affect the structure and properties of these networks. We will review the most recent empirical observations and the most important models of spatial networks. We will also discuss various processes which take place on these spatial networks, such as phase transitions, random walks, synchronization, navigation, resilience, and disease spread.

Proceedings of the 2004 High Spatial Resolution Commercial Imagery Workshop

NASA Technical Reports Server (NTRS)

2006-01-01

Topics covered include: NASA Applied Sciences Program; USGS Land Remote Sensing: Overview; QuickBird System Status and Product Overview; ORBIMAGE Overview; IKONOS 2004 Calibration and Validation Status; OrbView-3 Spatial Characterization; On-Orbit Modulation Transfer Function (MTF) Measurement of QuickBird; Spatial Resolution Characterization for QuickBird Image Products 2003-2004 Season; Image Quality Evaluation of QuickBird Super Resolution and Revisit of IKONOS: Civil and Commercial Application Project (CCAP); On-Orbit System MTF Measurement; QuickBird Post Launch Geopositional Characterization Update; OrbView-3 Geometric Calibration and Geopositional Accuracy; Geopositional Statistical Methods; QuickBird and OrbView-3 Geopositional Accuracy Assessment; Initial On-Orbit Spatial Resolution Characterization of OrbView-3 Panchromatic Images; Laboratory Measurement of Bidirectional Reflectance of Radiometric Tarps; Stennis Space Center Verification and Validation Capabilities; Joint Agency Commercial Imagery Evaluation (JACIE) Team; Adjacency Effects in High Resolution Imagery; Effect of Pulse Width vs. GSD on MTF Estimation; Camera and Sensor Calibration at the USGS; QuickBird Geometric Verification; Comparison of MODTRAN to Heritage-based Results in Vicarious Calibration at University of Arizona; Using Remotely Sensed Imagery to Determine Impervious Surface in Sioux Falls, South Dakota; Estimating Sub-Pixel Proportions of Sagebrush with a Regression Tree; How Do YOU Use the National Land Cover Dataset?; The National Map Hazards Data Distribution System; Recording a Troubled World; What Does This-Have to Do with This?; When Can a Picture Save a Thousand Homes?; InSAR Studies of Alaska Volcanoes; Earth Observing-1 (EO-1) Data Products; Improving Access to the USGS Aerial Film Collections: High Resolution Scanners; Improving Access to the USGS Aerial Film Collections: Phoenix Digitizing System Product Distribution; System and Product Characterization: Issues Approach; Innovative Approaches to Analysis of Lidar Data for the National Map; Changes in Imperviousness near Military Installations; Geopositional Accuracy Evaluations of QuickBird and OrbView-3: Civil and Commercial Applications Project (CCAP); Geometric Accuracy Assessment: OrbView ORTHO Products; QuickBird Radiometric Calibration Update; OrbView-3 Radiometric Calibration; QuickBird Radiometric Characterization; NASA Radiometric Characterization; Establishing and Verifying the Traceability of Remote-Sensing Measurements to International Standards; QuickBird Applications; Airport Mapping and Perpetual Monitoring Using IKONOS; OrbView-3 Relative Accuracy Results and Impacts on Exploitation and Accuracy Improvement; Using Remotely Sensed Imagery to Determine Impervious Surface in Sioux Falls, South Dakota; Applying High-Resolution Satellite Imagery and Remotely Sensed Data to Local Government Applications: Sioux Falls, South Dakota; Automatic Co-Registration of QuickBird Data for Change Detection Applications; Developing Coastal Surface Roughness Maps Using ASTER and QuickBird Data Sources; Automated, Near-Real Time Cloud and Cloud Shadow Detection in High Resolution VNIR Imagery; Science Applications of High Resolution Imagery at the USGS EROS Data Center; Draft Plan for Characterizing Commercial Data Products in Support of Earth Science Research; Atmospheric Correction Prototype Algorithm for High Spatial Resolution Multispectral Earth Observing Imaging Systems; Determining Regional Arctic Tundra Carbon Exchange: A Bottom-Up Approach; Using IKONOS Imagery to Assess Impervious Surface Area, Riparian Buffers and Stream Health in the Mid-Atlantic Region; Commercial Remote Sensing Space Policy Civil Implementation Update; USGS Commercial Remote Sensing Data Contracts (CRSDC); and Commercial Remote Sensing Space Policy (CRSSP): Civil Near-Term Requirements Collection Update.

Intrapersonal, interpersonal, and physical space in anorexia nervosa: a virtual reality and repertory grid investigation.

PubMed

Cipolletta, Sabrina; Malighetti, Clelia; Serino, Silvia; Riva, Giuseppe; Winter, David

2017-06-01

Anorexia nervosa (AN) is an eating disorder characterized by severe body image disturbances. Recent studies from spatial cognition showed a connection between the experience of body and of space. The objectives of this study were to explore the meanings that characterize AN experience and to deepen the examination of spatiality in relational terms, through the study of how the patient construes herself and her interpersonal world. More specifically this study aimed (1) to verify whether spatial variables and aspects of construing differentiate patients with AN and healthy controls (HCs) and are related to severity of anorexic symptomatology; (2) to explore correlations between impairments in spatial abilities and interpersonal construing. A sample of 12 AN patients and 12 HCs participated in the study. The Eating Disorder Inventory, a virtual reality-based procedure, traditional measures of spatial abilities, and repertory grids were administered. The AN group compared to HCs showed significant impairments in spatial abilities, more unidimensional construing, and more extreme construing of the present self and of the self as seen by others. All these dimensions correlated with the severity of symptomatology. Extreme ways of construing characterized individuals with AN and might represent the interpersonal aspect of impairment in spatial reference frames. Copyright © 2017 Elsevier Ireland Ltd. All rights reserved.

On the Character and Mitigation of Atmospheric Noise in InSAR Time Series Analysis (Invited)

NASA Astrophysics Data System (ADS)

Barnhart, W. D.; Fielding, E. J.; Fishbein, E.

2013-12-01

Time series analysis of interferometric synthetic aperture radar (InSAR) data, with its broad spatial coverage and ability to image regions that are sometimes very difficult to access, is a powerful tool for characterizing continental surface deformation and its temporal variations. With the impending launch of dedicated SAR missions such as Sentinel-1, ALOS-2, and the planned NASA L-band SAR mission, large volume data sets will allow researchers to further probe ground displacement processes with increased fidelity. Unfortunately, the precision of measurements in individual interferograms is impacted by several sources of noise, notably spatially correlated signals caused by path delays through the stratified and turbulent atmosphere and ionosphere. Spatial and temporal variations in atmospheric water vapor often introduce several to tens of centimeters of apparent deformation in the radar line-of-sight, correlated over short spatial scales (<10 km). Signals resulting from atmospheric path delays are particularly problematic because, like the subsidence and uplift signals associated with tectonic deformation, they are often spatially correlated with topography. In this talk, we provide an overview of the effects of spatially correlated tropospheric noise in individual interferograms and InSAR time series analysis, and we highlight where common assumptions of the temporal and spatial characteristics of tropospheric noise fail. Next, we discuss two classes of methods for mitigating the effects of tropospheric water vapor noise in InSAR time series analysis and single interferograms: noise estimation and characterization with independent observations from multispectral sensors such as MODIS and MERIS; and noise estimation and removal with weather models, multispectral sensor observations, and GPS. Each of these techniques can provide independent assessments of the contribution of water vapor in interferograms, but each technique also suffers from several pitfalls that we outline. The multispectral near-infrared (NIR) sensors provide high spatial resolution (~1 km) estimates of total column tropospheric water vapor by measuring the absorption of reflected solar illumination and provide may excellent estimates of wet delay. The Online Services for Correcting Atmosphere in Radar (OSCAR) project currently provides water vapor products through web services (http://oscar.jpl.nasa.gov). Unfortunately, such sensors require daytime and cloudless observations. Global and regional numerical weather models can provide an additional estimate of both the dry and atmospheric delays with spatial resolution of (3-100 km) and time scales of 1-3 hours, though these models are of lower accuracy than imaging observations and are benefited by independent observations from independent observations of atmospheric water vapor. Despite these issues, the integration of these techniques for InSAR correction and uncertainty estimation may contribute substantially to the reduction and rigorous characterization of uncertainty in InSAR time series analysis - helping to expand the range of tectonic displacements imaged with InSAR, to robustly constrain geophysical models, and to generate a-priori assessments of satellite acquisitions goals.

Cross delay line sensor characterization

DOE Office of Scientific and Technical Information (OSTI.GOV)

Owens, Israel J; Remelius, Dennis K; Tiee, Joe J

There exists a wealth of information in the scientific literature on the physical properties and device characterization procedures for complementary metal oxide semiconductor (CMOS), charge coupled device (CCD) and avalanche photodiode (APD) format detectors. Numerous papers and books have also treated photocathode operation in the context of photomultiplier tube (PMT) operation for either non imaging applications or limited night vision capability. However, much less information has been reported in the literature about the characterization procedures and properties of photocathode detectors with novel cross delay line (XDL) anode structures. These allow one to detect single photons and create images by recordingmore » space and time coordinate (X, Y & T) information. In this paper, we report on the physical characteristics and performance of a cross delay line anode sensor with an enhanced near infrared wavelength response photocathode and high dynamic range micro channel plate (MCP) gain (> 10{sup 6}) multiplier stage. Measurement procedures and results including the device dark event rate (DER), pulse height distribution, quantum and electronic device efficiency (QE & DQE) and spatial resolution per effective pixel region in a 25 mm sensor array are presented. The overall knowledge and information obtained from XDL sensor characterization allow us to optimize device performance and assess capability. These device performance properties and capabilities make XDL detectors ideal for remote sensing field applications that require single photon detection, imaging, sub nano-second timing response, high spatial resolution (10's of microns) and large effective image format.« less

Effect of scanning velocity on femtosecond laser-induced periodic surface structures on HgCdTe crystal

NASA Astrophysics Data System (ADS)

Gu, Hongan; Dai, Ye; Wang, Haodong; Yan, Xiaona; Ma, Guohong

2017-12-01

In this paper, a femtosecond laser line-scanning irradiation was used to induce the periodic surface microstructure on HgCdTe crystal. Low spatial frequency laser induced periodic surface structures of 650-770 nm and high spatial frequency laser induced periodic surface structures of 152-246 nm were respectively found with different scanning speeds. The evolution process from low spatial frequency laser induced periodic surface structures to high spatial frequency laser induced periodic surface structures is characterized by scanning electron microscope. Their spatial periods deduced by using a two-dimensional Fourier transformation partly agree with the predictions of the Sipe-Drude theory. Confocal micro-Raman spectral show that the atomic arrangement of induced low spatial frequency laser-induced structures are basically consistent with the crystal in the central area of laser-scanning line, however a new peak at 164 cm-1 for the CdTe-like mode becomes evident due to the Hg vaporization when strong laser ablation happens. The obtained surface periodic ripples may have applications in fabricating advanced infrared detector.

Urban soil exploration through multi-receiver electromagnetic induction and stepped-frequency ground penetrating radar.

PubMed

Van De Vijver, Ellen; Van Meirvenne, Marc; Vandenhaute, Laura; Delefortrie, Samuël; De Smedt, Philippe; Saey, Timothy; Seuntjens, Piet

2015-07-01

In environmental assessments, the characterization of urban soils relies heavily on invasive investigation, which is often insufficient to capture their full spatial heterogeneity. Non-invasive geophysical techniques enable rapid collection of high-resolution data and provide a cost-effective alternative to investigate soil in a spatially comprehensive way. This paper presents the results of combining multi-receiver electromagnetic induction and stepped-frequency ground penetrating radar to characterize a former garage site contaminated with petroleum hydrocarbons. The sensor combination showed the ability to identify and accurately locate building remains and a high-density soil layer, thus demonstrating the high potential to investigate anthropogenic disturbances of physical nature. In addition, a correspondence was found between an area of lower electrical conductivity and elevated concentrations of petroleum hydrocarbons, suggesting the potential to detect specific chemical disturbances. We conclude that the sensor combination provides valuable information for preliminary assessment of urban soils.

Hyperspectral imaging spectro radiometer improves radiometric accuracy

NASA Astrophysics Data System (ADS)

Prel, Florent; Moreau, Louis; Bouchard, Robert; Bullis, Ritchie D.; Roy, Claude; Vallières, Christian; Levesque, Luc

2013-06-01

Reliable and accurate infrared characterization is necessary to measure the specific spectral signatures of aircrafts and associated infrared counter-measures protections (i.e. flares). Infrared characterization is essential to improve counter measures efficiency, improve friend-foe identification and reduce the risk of friendly fire. Typical infrared characterization measurement setups include a variety of panchromatic cameras and spectroradiometers. Each instrument brings essential information; cameras measure the spatial distribution of targets and spectroradiometers provide the spectral distribution of the emitted energy. However, the combination of separate instruments brings out possible radiometric errors and uncertainties that can be reduced with Hyperspectral imagers. These instruments combine both spectral and spatial information into the same data. These instruments measure both the spectral and spatial distribution of the energy at the same time ensuring the temporal and spatial cohesion of collected information. This paper presents a quantitative analysis of the main contributors of radiometric uncertainties and shows how a hyperspectral imager can reduce these uncertainties.

Spatial coherence resonance and spatial pattern transition induced by the decrease of inhibitory effect in a neuronal network

NASA Astrophysics Data System (ADS)

Tao, Ye; Gu, Huaguang; Ding, Xueli

2017-10-01

Spiral waves were observed in the biological experiment on rat brain cortex with the application of carbachol and bicuculline which can block inhibitory coupling from interneurons to pyramidal neurons. To simulate the experimental spiral waves, a two-dimensional neuronal network composed of pyramidal neurons and inhibitory interneurons was built. By decreasing the percentage of active inhibitory interneurons, the random-like spatial patterns change to spiral waves and to random-like spatial patterns or nearly synchronous behaviors. The spiral waves appear at a low percentage of inhibitory interneurons, which matches the experimental condition that inhibitory couplings of the interneurons were blocked. The spiral waves exhibit a higher order or signal-to-noise ratio (SNR) characterized by spatial structure function than both random-like spatial patterns and nearly synchronous behaviors, which shows that changes of the percentage of active inhibitory interneurons can induce spatial coherence resonance-like behaviors. In addition, the relationship between the coherence degree and the spatial structures of the spiral waves is identified. The results not only present a possible and reasonable interpretation to the spiral waves observed in the biological experiment on the brain cortex with disinhibition, but also reveal that the spiral waves exhibit more ordered degree in spatial patterns.

Erosion, sedimentation, and cumulative effects in the Northern Rocky Mountains

Treesearch

Walter F. Megahan; John G. King

2004-01-01

Erosion and sedimentation are natural geomorphic processes characterized by large temporal and spatial variability. Recent radionuclide studies suggest that rare episodic events, such as large wildfires, produce massive sediment yields over time scales of thousands of years, thereby causing long-term average sediment production to exceed present-day average erosion...

Effects of spatial allocation and parameter variability on lakewide estimates from surveys of Lake Superior, North America’s largest lake

EPA Science Inventory

Lake Superior was sampled in 2011 using a Generalized Random Tessellation Stratified design (n=54 sites) to characterize biological and chemical properties of this huge aquatic resource, with statistical confidence. The lake was divided into two strata (inshore <100m and offsh...

A novel mobile monitoring approach to characterize spatial and temporal variation in traffic-related air pollutants in an urban community

NASA Astrophysics Data System (ADS)

Yu, Chang Ho; Fan, Zhihua; Lioy, Paul J.; Baptista, Ana; Greenberg, Molly; Laumbach, Robert J.

2016-09-01

Air concentrations of traffic-related air pollutants (TRAPs) vary in space and time within urban communities, presenting challenges for estimating human exposure and potential health effects. Conventional stationary monitoring stations/networks cannot effectively capture spatial characteristics. Alternatively, mobile monitoring approaches became popular to measure TRAPs along roadways or roadsides. However, these linear mobile monitoring approaches cannot thoroughly distinguish spatial variability from temporal variations in monitored TRAP concentrations. In this study, we used a novel mobile monitoring approach to simultaneously characterize spatial/temporal variations in roadside concentrations of TRAPs in urban settings. We evaluated the effectiveness of this mobile monitoring approach by performing concurrent measurements along two parallel paths perpendicular to a major roadway and/or along heavily trafficked roads at very narrow scale (one block away each other) within short time period (<30 min) in an urban community. Based on traffic and particulate matter (PM) source information, we selected 4 neighborhoods to study. The sampling activities utilized real-time monitors, including battery-operated PM2.5 monitor (SidePak), condensation particle counter (CPC 3007), black carbon (BC) monitor (Micro-Aethalometer), carbon monoxide (CO) monitor (Langan T15), and portable temperature/humidity data logger (HOBO U12), and a GPS-based tracker (Trackstick). Sampling was conducted for ∼3 h in the morning (7:30-10:30) in 7 separate days in March/April and 6 days in May/June 2012. Two simultaneous samplings were made at 5 spatially-distributed locations on parallel roads, usually distant one block each other, in each neighborhood. The 5-min averaged BC concentrations (AVG ± SD, [range]) were 2.53 ± 2.47 [0.09-16.3] μg/m3, particle number concentrations (PNC) were 33,330 ± 23,451 [2512-159,130] particles/cm3, PM2.5 mass concentrations were 8.87 ± 7.65 [0.27-46.5] μg/m3, and CO concentrations were 1.22 ± 0.60 [0.22-6.29] ppm in the community. The traffic-related air pollutants, BC and PNC, but not PM2.5 or CO, varied spatially depending on proximity to local stationary/mobile sources. Seasonal differences were observed for all four TRAPs, significantly higher in colder months than in warmer months. The coefficients of variation (CVs) in concurrent measurements from two parallel routes were calculated around 0.21 ± 0.17, and variations were attributed by meteorological variation (25%), temporal variability (19%), concentration level (6%), and spatial variability (2%), respectively. Overall study findings suggest this mobile monitoring approach could effectively capture and distinguish spatial/temporal characteristics in TRAP concentrations for communities impacted by heavy motor vehicle traffic and mixed urban air pollution sources.

An explicit approach to detecting and characterizing submersed aquatic vegetation using a single-beam digital echosounder

NASA Astrophysics Data System (ADS)

Sabol, Bruce M.

2005-09-01

There has been a longstanding need for an objective and cost-effective technique to detect, characterize, and quantify submersed aquatic vegetation at spatial scales between direct physical sampling and remote aerial-based imaging. Acoustic-based approaches for doing so are reviewed and an explicit approach, using a narrow, single-beam echosounder, is described in detail. This heuristic algorithm is based on the spatial distribution of a thresholded signal generated from a high-frequency, narrow-beam echosounder operated in a vertical orientation from a survey boat. The physical basis, rationale, and implementation of this algorithm are described, and data documenting performance are presented. Using this technique, it is possible to generate orders of magnitude more data than would be available using previous techniques with a comparable level of effort. Thus, new analysis and interpretation approaches are called for which can make full use of these data. Several analyses' examples are shown for environmental effects application studies. Current operational window and performance limitations are identified and thoughts on potential processing approaches to improve performance are discussed.

Characterizing the effects of feature salience and top-down attention in the early visual system.

PubMed

Poltoratski, Sonia; Ling, Sam; McCormack, Devin; Tong, Frank

2017-07-01

The visual system employs a sophisticated balance of attentional mechanisms: salient stimuli are prioritized for visual processing, yet observers can also ignore such stimuli when their goals require directing attention elsewhere. A powerful determinant of visual salience is local feature contrast: if a local region differs from its immediate surround along one or more feature dimensions, it will appear more salient. We used high-resolution functional MRI (fMRI) at 7T to characterize the modulatory effects of bottom-up salience and top-down voluntary attention within multiple sites along the early visual pathway, including visual areas V1-V4 and the lateral geniculate nucleus (LGN). Observers viewed arrays of spatially distributed gratings, where one of the gratings immediately to the left or right of fixation differed from all other items in orientation or motion direction, making it salient. To investigate the effects of directed attention, observers were cued to attend to the grating to the left or right of fixation, which was either salient or nonsalient. Results revealed reliable additive effects of top-down attention and stimulus-driven salience throughout visual areas V1-hV4. In comparison, the LGN exhibited significant attentional enhancement but was not reliably modulated by orientation- or motion-defined salience. Our findings indicate that top-down effects of spatial attention can influence visual processing at the earliest possible site along the visual pathway, including the LGN, whereas the processing of orientation- and motion-driven salience primarily involves feature-selective interactions that take place in early cortical visual areas. NEW & NOTEWORTHY While spatial attention allows for specific, goal-driven enhancement of stimuli, salient items outside of the current focus of attention must also be prioritized. We used 7T fMRI to compare salience and spatial attentional enhancement along the early visual hierarchy. We report additive effects of attention and bottom-up salience in early visual areas, suggesting that salience enhancement is not contingent on the observer's attentional state. Copyright © 2017 the American Physiological Society.

Multi-Scale and Object-Oriented Analysis for Mountain Terrain Segmentation and Geomorphological Assessment

NASA Astrophysics Data System (ADS)

Marston, B. K.; Bishop, M. P.; Shroder, J. F.

2009-12-01

Digital terrain analysis of mountain topography is widely utilized for mapping landforms, assessing the role of surface processes in landscape evolution, and estimating the spatial variation of erosion. Numerous geomorphometry techniques exist to characterize terrain surface parameters, although their utility to characterize the spatial hierarchical structure of the topography and permit an assessment of the erosion/tectonic impact on the landscape is very limited due to scale and data integration issues. To address this problem, we apply scale-dependent geomorphometric and object-oriented analyses to characterize the hierarchical spatial structure of mountain topography. Specifically, we utilized a high resolution digital elevation model to characterize complex topography in the Shimshal Valley in the Western Himalaya of Pakistan. To accomplish this, we generate terrain objects (geomorphological features and landform) including valley floors and walls, drainage basins, drainage network, ridge network, slope facets, and elemental forms based upon curvature. Object-oriented analysis was used to characterize object properties accounting for object size, shape, and morphometry. The spatial overlay and integration of terrain objects at various scales defines the nature of the hierarchical organization. Our results indicate that variations in the spatial complexity of the terrain hierarchical organization is related to the spatio-temporal influence of surface processes and landscape evolution dynamics. Terrain segmentation and the integration of multi-scale terrain information permits further assessment of process domains and erosion, tectonic impact potential, and natural hazard potential. We demonstrate this with landform mapping and geomorphological assessment examples.

Allee effects and the spatial dynamics of a locally endangered butterfly, the high brown fritillary (Argynnis adippe).

PubMed

Bonsall, Michael B; Dooley, Claire A; Kasparson, Anna; Brereton, Tom; Roy, David B; Thomas, Jeremy A

2014-01-01

Conservation of endangered species necessitates a full appreciation of the ecological processes affecting the regulation, limitation, and persistence of populations. These processes are influenced by birth, death, and dispersal events, and characterizing them requires careful accounting of both the deterministic and stochastic processes operating at both local and regional population levels. We combined ecological theory and observations on Allee effects by linking mathematical analysis and the spatial and temporal population dynamics patterns of a highly endangered butterfly, the high brown fritillary, Argynnis adippe. Our theoretical analysis showed that the role of density-dependent feedbacks in the presence of local immigration can influence the strength of Allee effects. Linking this theory to the analysis of the population data revealed strong evidence for both negative density dependence and Allee effects at the landscape or regional scale. These regional dynamics are predicted to be highly influenced by immigration. Using a Bayesian state-space approach, we characterized the local-scale births, deaths, and dispersal effects together with measurement and process uncertainty in the metapopulation. Some form of an Allee effect influenced almost three-quarters of these local populations. Our joint analysis of the deterministic and stochastic dynamics suggests that a conservation priority for this species would be to increase resource availability in currently occupied and, more importantly, in unoccupied sites.

Environmental heterogeneity blurs the signature of dispersal syndromes on spatial patterns of woody species in a moist tropical forest

PubMed Central

Velázquez, Eduardo; Escudero, Adrián; de la Cruz, Marcelino

2018-01-01

We assessed the relative importance of dispersal limitation, environmental heterogeneity and their joint effects as determinants of the spatial patterns of 229 species in the moist tropical forest of Barro Colorado Island (Panama). We differentiated five types of species according to their dispersal syndrome; autochorous, anemochorous, and zoochorous species with small, medium-size and large fruits. We characterized the spatial patterns of each species and we checked whether they were best fitted by Inhomogeneous Poisson (IPP), Homogeneous Poisson cluster (HPCP) and Inhomogeneous Poisson cluster processes (IPCP) by means of the Akaike Information Criterion. We also assessed the influence of species’ dispersal mode in the average cluster size. We found that 63% of the species were best fitted by IPCP regardless of their dispersal syndrome, although anemochorous species were best described by HPCP. Our results indicate that spatial patterns of tree species in this forest cannot be explained only by dispersal limitation, but by the joint effects of dispersal limitation and environmental heterogeneity. The absence of relationships between dispersal mode and degree of clustering suggests that several processes modify the original spatial pattern generated by seed dispersal. These findings emphasize the importance of fitting point process models with a different biological meaning when studying the main determinants of spatial structure in plant communities. PMID:29451871

Effects of Spatial Variability of Soil Properties on the Triggering of Rainfall-Induced Shallow Landslides

NASA Astrophysics Data System (ADS)

Fan, Linfeng; Lehmann, Peter; Or, Dani

2015-04-01

Naturally-occurring spatial variations in soil properties (e.g., soil depth, moisture, and texture) affect key hydrological processes and potentially the mechanical response of soil to hydromechanical loading (relative to the commonly-assumed uniform soil mantle). We quantified the effects of soil spatial variability on the triggering of rainfall-induced shallow landslides at the hillslope- and catchment-scales, using a physically-based landslide triggering model that considers interacting soil columns with mechanical strength thresholds (represented by the Fiber Bundle Model). The spatial variations in soil properties are represented as Gaussian random distributions and the level of variation is characterized by the coefficient of variation and correlation lengths of soil properties (i.e., soil depth, soil texture and initial water content in this study). The impacts of these spatial variations on landslide triggering characteristics were measured by comparing the times to triggering and landslide volumes for heterogeneous soil properties and homogeneous cases. Results at hillslope scale indicate that for spatial variations of an individual property (without cross correlation), the increasing of coefficient of variation introduces weak spots where mechanical damage is accelerated and leads to earlier onset of landslide triggering and smaller volumes. Increasing spatial correlation length of soil texture and initial water content also induces early landslide triggering and small released volumes due to the transition of failure mode from brittle to ductile failure. In contrast, increasing spatial correlation length of soil depth "reduces" local steepness and postpones landslide triggering. Cross-correlated soil properties generally promote landslide initiation, but depending on the internal structure of spatial distribution of each soil property, landslide triggering may be reduced. The effects of cross-correlation between initial water content and soil texture were investigated in detail at the catchment scale by incorporating correlations of both variables with topography. Results indicate that the internal structure of the spatial distribution of each soil property together with their interplays determine the overall performance of the coupled spatial variability. This study emphasizes the importance of both the randomness and spatial structure of soil properties on landslide triggering and characteristics.

Multiscale Structure of UXO Site Characterization: Spatial Estimation and Uncertainty Quantification

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ostrouchov, George; Doll, William E.; Beard, Les P.

2009-01-01

Unexploded ordnance (UXO) site characterization must consider both how the contamination is generated and how we observe that contamination. Within the generation and observation processes, dependence structures can be exploited at multiple scales. We describe a conceptual site characterization process, the dependence structures available at several scales, and consider their statistical estimation aspects. It is evident that most of the statistical methods that are needed to address the estimation problems are known but their application-specific implementation may not be available. We demonstrate estimation at one scale and propose a representation for site contamination intensity that takes full account of uncertainty,more » is flexible enough to answer regulatory requirements, and is a practical tool for managing detailed spatial site characterization and remediation. The representation is based on point process spatial estimation methods that require modern computational resources for practical application. These methods have provisions for including prior and covariate information.« less

Lock-in thermography approach for imaging the efficiency of light emitters and optical coolers

NASA Astrophysics Data System (ADS)

Radevici, Ivan; Tiira, Jonna; Oksanen, Jani

2017-02-01

Developing optical cooling technologies requires access to reliable efficiency measurement techniques and ability to detect spatial variations in the efficiency and light emission of the devices. We investigate the possibility to combine the calorimetric efficiency measurement principles with lock-in thermography (LIT) and conventional luminescence microscopy to enable spatially resolved measurement of the efficiency, current spreading and local device heating of double diode structures (DDS) serving as test vessels for developing thermophotonic cooling devices. Our approach enables spatially resolved characterization and localization of the losses of the double diode structures as well as other light emitting semiconductor devices. In particular, the approach may allow directly observing effects like current crowding and surface recombination on the light emission and heating of the DDS devices.

Modeling tree crown dynamics with 3D partial differential equations.

PubMed

Beyer, Robert; Letort, Véronique; Cournède, Paul-Henry

2014-01-01

We characterize a tree's spatial foliage distribution by the local leaf area density. Considering this spatially continuous variable allows to describe the spatiotemporal evolution of the tree crown by means of 3D partial differential equations. These offer a framework to rigorously take locally and adaptively acting effects into account, notably the growth toward light. Biomass production through photosynthesis and the allocation to foliage and wood are readily included in this model framework. The system of equations stands out due to its inherent dynamic property of self-organization and spontaneous adaptation, generating complex behavior from even only a few parameters. The density-based approach yields spatially structured tree crowns without relying on detailed geometry. We present the methodological fundamentals of such a modeling approach and discuss further prospects and applications.

Landscape configuration is the primary driver of impacts on water quality associated with agricultural expansion

NASA Astrophysics Data System (ADS)

Chaplin-Kramer, Rebecca; Hamel, Perrine; Sharp, Richard; Kowal, Virgina; Wolny, Stacie; Sim, Sarah; Mueller, Carina

2016-07-01

Corporations and other multinational institutions are increasingly looking to evaluate their innovation and procurement decisions over a range of environmental criteria, including impacts on ecosystem services according to the spatial configuration of activities on the landscape. We have developed a spatially explicit approach and modeled a hypothetical corporate supply chain decision representing contrasting patterns of land-use change in four regions of the globe. This illustrates the effect of introducing spatial considerations in the analysis of ecosystem services, specifically sediment retention. We explored a wide variety of contexts (Iowa, USA; Mato Grosso, Brazil; and Jiangxi and Heilongjiang in China) and these show that per-area representation of impacts based on the physical characterization of a region can be misleading. We found two- to five-fold differences in sediment export for the same amount of habitat conversion within regions characterized by similar physical traits. These differences were mainly determined by the distance between land use changes and streams. The influence of landscape configuration is so dramatic that it can override wide variation in erosion potential driven by physical factors like soil type, slope, and climate. To minimize damage to spatially-dependent ecosystem services like water purification, sustainable sourcing strategies should not assume a direct correlation between impact and area but rather allow for possible nonlinearity in impacts, especially in regions with little remaining habitat and highly variable hydrological connectivity.

Scale-dependent effects of land cover on water physico-chemistry and diatom-based metrics in a major river system, the Adour-Garonne basin (South Western France).

PubMed

Tudesque, Loïc; Tisseuil, Clément; Lek, Sovan

2014-01-01

The scale dependence of ecological phenomena remains a central issue in ecology. Particularly in aquatic ecology, the consideration of the accurate spatial scale in assessing the effects of landscape factors on stream condition is critical. In this context, our study aimed at assessing the relationships between multi-spatial scale land cover patterns and a variety of water quality and diatom metrics measured at the stream reach level. This investigation was conducted in a major European river system, the Adour-Garonne river basin, characterized by a wide range of ecological conditions. Redundancy analysis (RDA) and variance partitioning techniques were used to disentangle the different relationships between land cover, water-chemistry and diatom metrics. Our results revealed a top-down "cascade effect" indirectly linking diatom metrics to land cover patterns through water physico-chemistry, which occurred at the largest spatial scales. In general, the strength of the relationships between land cover, physico-chemistry, and diatoms was shown to increase with the spatial scale, from the local to the basin scale, emphasizing the importance of continuous processes of accumulation throughout the river gradient. Unexpectedly, we established that the influence of land cover on the diatom metric was of primary importance both at the basin and local scale, as a result of discontinuous but not necessarily antagonist processes. The most detailed spatial grain of the Corine land cover classification appeared as the most relevant spatial grain to relate land cover to water chemistry and diatoms. Our findings provide suitable information to improve the implementation of effective diatom-based monitoring programs, especially within the scope of the European Water Framework Directive. © 2013 Elsevier B.V. All rights reserved.

Few-mode fiber, splice and SDM component characterization by spatially-diverse optical vector network analysis.

PubMed

Rommel, Simon; Mendinueta, José Manuel Delgado; Klaus, Werner; Sakaguchi, Jun; Olmos, Juan José Vegas; Awaji, Yoshinari; Monroy, Idelfonso Tafur; Wada, Naoya

2017-09-18

This paper discusses spatially diverse optical vector network analysis for space division multiplexing (SDM) component and system characterization, which is becoming essential as SDM is widely considered to increase the capacity of optical communication systems. Characterization of a 108-channel photonic lantern spatial multiplexer, coupled to a 36-core 3-mode fiber, is experimentally demonstrated, extracting the full impulse response and complex transfer function matrices as well as insertion loss (IL) and mode-dependent loss (MDL) data. Moreover, the mode-mixing behavior of fiber splices in the few-mode multi-core fiber and their impact on system IL and MDL are analyzed, finding splices to cause significant mode-mixing and to be non-negligible in system capacity analysis.

Crystal structure and optical properties of silver nanorings

NASA Astrophysics Data System (ADS)

Zhou, Li; Fu, Xiao-Feng; Yu, Liao; Zhang, Xian; Yu, Xue-Feng; Hao, Zhong-Hua

2009-04-01

We report the polyol synthesis and crystal structure characterization of silver nanorings, which have perfect circular shape, smooth surface, and elliptical wire cross-section. The characterization results show that the silver nanorings have well-defined crystal of singly twinned along the whole ring. The spatial distribution of the scattering of a silver nanoring with slanted incidence reveals the unique focus effect of the nanoring, and the focus scattering varies with the incident wavelength. The silver nanorings with perfect geometry and well-defined crystal have potential applications in nanoscaled photonics, plasmonic devices, and optical manipulation.

Mushroom biomass and diversity are driven by different spatio-temporal scales along Mediterranean elevation gradients

NASA Astrophysics Data System (ADS)

Alday, Josu G.; Martínez de Aragón, Juan; de-Miguel, Sergio; Bonet, José Antonio

2017-04-01

Mushrooms are important non-wood-forest-products in many Mediterranean ecosystems, being highly vulnerable to climate change. However, the ecological scales of variation of mushroom productivity and diversity, and climate dependence has been usually overlooked due to a lack of available data. We determined the spatio-temporal variability of epigeous sporocarps and the climatic factors driving their fruiting to plan future sustainable management of wild mushrooms production. We collected fruiting bodies in Pinus sylvestris stands along an elevation gradient for 8 consecutive years. Overall, sporocarp biomass was mainly dependent on inter-annual variations, whereas richness was more spatial-scale dependent. Elevation was not significant, but there were clear elevational differences in biomass and richness patterns between ectomycorrhizal and saprotrophic guilds. The main driver of variation was late-summer-early-autumn precipitation. Thus, different scale processes (inter-annual vs. spatial-scale) drive sporocarp biomass and diversity patterns; temporal effects for biomass and ectomycorrhizal fungi vs. spatial scale for diversity and saprotrophic fungi. The significant role of precipitation across fungal guilds and spatio-temporal scales indicates that it is a limiting resource controlling sporocarp production and diversity in Mediterranean regions. The high spatial and temporal variability of mushrooms emphasize the need for long-term datasets of multiple spatial points to effectively characterize fungal fruiting patterns.

Spatial reversal learning in preclinical scrapie-inoculated mice.

PubMed

Lysons, A M; Woollard, S J

1996-04-10

Acquisition and reversal of a two-choice spatial discrimination were tested in scrapie-inoculated mice. Both acquisition and reversal were normal in mice tested 138 and 103 days prior to the onset of clinical symptoms. At 65 days before onset of clinical symptoms, scrapie-inoculated mice required more trails to criterion in reversal learning, but this effect was not significant in a second experiment (68 days preclinical) and was transient: no effect was seen 33 days before symptoms. However, the course of reversal learning was abnormal in all three late preclinical groups (68, 65 and 33 days before symptoms). Reversal learning in these three groups was characterized by a rapid extinction of the original discrimination, followed by a period, absent in controls, during which performance showed no further improvement. This effect corresponds in time of onset to the appearance of characteristic neuropathological features.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yashchuk, V. V.; Fischer, P. J.; Chan, E. R.

We present a modulation transfer function (MTF) calibration method based on binary pseudo-random (BPR) one-dimensional sequences and two-dimensional arrays as an effective method for spectral characterization in the spatial frequency domain of a broad variety of metrology instrumentation, including interferometric microscopes, scatterometers, phase shifting Fizeau interferometers, scanning and transmission electron microscopes, and at this time, x-ray microscopes. The inherent power spectral density of BPR gratings and arrays, which has a deterministic white-noise-like character, allows a direct determination of the MTF with a uniform sensitivity over the entire spatial frequency range and field of view of an instrument. We demonstrate themore » MTF calibration and resolution characterization over the full field of a transmission soft x-ray microscope using a BPR multilayer (ML) test sample with 2.8 nm fundamental layer thickness. We show that beyond providing a direct measurement of the microscope's MTF, tests with the BPRML sample can be used to fine tune the instrument's focal distance. Finally, our results confirm the universality of the method that makes it applicable to a large variety of metrology instrumentation with spatial wavelength bandwidths from a few nanometers to hundreds of millimeters.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yashchuk, V. V., E-mail: VVYashchuk@lbl.gov; Chan, E. R.; Lacey, I.

We present a modulation transfer function (MTF) calibration method based on binary pseudo-random (BPR) one-dimensional sequences and two-dimensional arrays as an effective method for spectral characterization in the spatial frequency domain of a broad variety of metrology instrumentation, including interferometric microscopes, scatterometers, phase shifting Fizeau interferometers, scanning and transmission electron microscopes, and at this time, x-ray microscopes. The inherent power spectral density of BPR gratings and arrays, which has a deterministic white-noise-like character, allows a direct determination of the MTF with a uniform sensitivity over the entire spatial frequency range and field of view of an instrument. We demonstrate themore » MTF calibration and resolution characterization over the full field of a transmission soft x-ray microscope using a BPR multilayer (ML) test sample with 2.8 nm fundamental layer thickness. We show that beyond providing a direct measurement of the microscope’s MTF, tests with the BPRML sample can be used to fine tune the instrument’s focal distance. Our results confirm the universality of the method that makes it applicable to a large variety of metrology instrumentation with spatial wavelength bandwidths from a few nanometers to hundreds of millimeters.« less

Stacked sparse autoencoder in hyperspectral data classification using spectral-spatial, higher order statistics and multifractal spectrum features

NASA Astrophysics Data System (ADS)

Wan, Xiaoqing; Zhao, Chunhui; Wang, Yanchun; Liu, Wu

2017-11-01

This paper proposes a novel classification paradigm for hyperspectral image (HSI) using feature-level fusion and deep learning-based methodologies. Operation is carried out in three main steps. First, during a pre-processing stage, wave atoms are introduced into bilateral filter to smooth HSI, and this strategy can effectively attenuate noise and restore texture information. Meanwhile, high quality spectral-spatial features can be extracted from HSI by taking geometric closeness and photometric similarity among pixels into consideration simultaneously. Second, higher order statistics techniques are firstly introduced into hyperspectral data classification to characterize the phase correlations of spectral curves. Third, multifractal spectrum features are extracted to characterize the singularities and self-similarities of spectra shapes. To this end, a feature-level fusion is applied to the extracted spectral-spatial features along with higher order statistics and multifractal spectrum features. Finally, stacked sparse autoencoder is utilized to learn more abstract and invariant high-level features from the multiple feature sets, and then random forest classifier is employed to perform supervised fine-tuning and classification. Experimental results on two real hyperspectral data sets demonstrate that the proposed method outperforms some traditional alternatives.

Characterizing the heterogeneity of tumor tissues from spatially resolved molecular measures

PubMed Central

Zavodszky, Maria I.

2017-01-01

Background Tumor heterogeneity can manifest itself by sub-populations of cells having distinct phenotypic profiles expressed as diverse molecular, morphological and spatial distributions. This inherent heterogeneity poses challenges in terms of diagnosis, prognosis and efficient treatment. Consequently, tools and techniques are being developed to properly characterize and quantify tumor heterogeneity. Multiplexed immunofluorescence (MxIF) is one such technology that offers molecular insight into both inter-individual and intratumor heterogeneity. It enables the quantification of both the concentration and spatial distribution of 60+ proteins across a tissue section. Upon bioimage processing, protein expression data can be generated for each cell from a tissue field of view. Results The Multi-Omics Heterogeneity Analysis (MOHA) tool was developed to compute tissue heterogeneity metrics from MxIF spatially resolved tissue imaging data. This technique computes the molecular state of each cell in a sample based on a pathway or gene set. Spatial states are then computed based on the spatial arrangements of the cells as distinguished by their respective molecular states. MOHA computes tissue heterogeneity metrics from the distributions of these molecular and spatially defined states. A colorectal cancer cohort of approximately 700 subjects with MxIF data is presented to demonstrate the MOHA methodology. Within this dataset, statistically significant correlations were found between the intratumor AKT pathway state diversity and cancer stage and histological tumor grade. Furthermore, intratumor spatial diversity metrics were found to correlate with cancer recurrence. Conclusions MOHA provides a simple and robust approach to characterize molecular and spatial heterogeneity of tissues. Research projects that generate spatially resolved tissue imaging data can take full advantage of this useful technique. The MOHA algorithm is implemented as a freely available R script (see supplementary information). PMID:29190747

BaTMAn: Bayesian Technique for Multi-image Analysis

NASA Astrophysics Data System (ADS)

Casado, J.; Ascasibar, Y.; García-Benito, R.; Guidi, G.; Choudhury, O. S.; Bellocchi, E.; Sánchez, S. F.; Díaz, A. I.

2016-12-01

Bayesian Technique for Multi-image Analysis (BaTMAn) characterizes any astronomical dataset containing spatial information and performs a tessellation based on the measurements and errors provided as input. The algorithm iteratively merges spatial elements as long as they are statistically consistent with carrying the same information (i.e. identical signal within the errors). The output segmentations successfully adapt to the underlying spatial structure, regardless of its morphology and/or the statistical properties of the noise. BaTMAn identifies (and keeps) all the statistically-significant information contained in the input multi-image (e.g. an IFS datacube). The main aim of the algorithm is to characterize spatially-resolved data prior to their analysis.

Effects of uncertain topographic input data on two-dimensional flow modeling in a gravel-bed river

USGS Publications Warehouse

Legleiter, C.J.; Kyriakidis, P.C.; McDonald, R.R.; Nelson, J.M.

2011-01-01

Many applications in river research and management rely upon two-dimensional (2D) numerical models to characterize flow fields, assess habitat conditions, and evaluate channel stability. Predictions from such models are potentially highly uncertain due to the uncertainty associated with the topographic data provided as input. This study used a spatial stochastic simulation strategy to examine the effects of topographic uncertainty on flow modeling. Many, equally likely bed elevation realizations for a simple meander bend were generated and propagated through a typical 2D model to produce distributions of water-surface elevation, depth, velocity, and boundary shear stress at each node of the model's computational grid. Ensemble summary statistics were used to characterize the uncertainty associated with these predictions and to examine the spatial structure of this uncertainty in relation to channel morphology. Simulations conditioned to different data configurations indicated that model predictions became increasingly uncertain as the spacing between surveyed cross sections increased. Model sensitivity to topographic uncertainty was greater for base flow conditions than for a higher, subbankfull flow (75% of bankfull discharge). The degree of sensitivity also varied spatially throughout the bend, with the greatest uncertainty occurring over the point bar where the flow field was influenced by topographic steering effects. Uncertain topography can therefore introduce significant uncertainty to analyses of habitat suitability and bed mobility based on flow model output. In the presence of such uncertainty, the results of these studies are most appropriately represented in probabilistic terms using distributions of model predictions derived from a series of topographic realizations. Copyright 2011 by the American Geophysical Union.

Effect of Spatial Resolution for Characterizing Soil Properties from Imaging Spectrometer Data

NASA Astrophysics Data System (ADS)

Dutta, D.; Kumar, P.; Greenberg, J. A.

2015-12-01

The feasibility of quantifying soil constituents over large areas using airborne hyperspectral data [0.35 - 2.5 μm] in an ensemble bootstrapping lasso algorithmic framework has been demonstrated previously [1]. However the effects of coarsening the spatial resolution of hyperspectral data on the quantification of soil constituents are unknown. We use Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data collected at 7.6m resolution over Birds Point New Madrid (BPNM) floodway for up-scaling and generating multiple coarser resolution datasets including the 60m Hyperspectral Infrared Imager (HyspIRI) like data. HyspIRI is a proposed visible shortwave/thermal infrared mission, which will provide global data over a spectral range of 0.35 - 2.5μm at a spatial resolution of 60m. Our results show that the lasso method, which is based on point scale observational data, is scalable. We found consistent good model performance (R2) values (0.79 < R2 < 0.82) and correct classifications as per USDA soil texture classes at multiple spatial resolutions. The results further demonstrate that the attributes of the pdf for different soil constituents across the landscape and the within-pixel variance are well preserved across scales. Our analysis provides a methodological framework with a sufficient set of metrics for assessing the performance of scaling up analysis from point scale observational data and may be relevant for other similar remote sensing studies. [1] Dutta, D.; Goodwell, A.E.; Kumar, P.; Garvey, J.E.; Darmody, R.G.; Berretta, D.P.; Greenberg, J.A., "On the Feasibility of Characterizing Soil Properties From AVIRIS Data," Geoscience and Remote Sensing, IEEE Transactions on, vol.53, no.9, pp.5133,5147, Sept. 2015. doi: 10.1109/TGRS.2015.2417547.

OrbView-3 Initial On-Orbit Characterization

NASA Technical Reports Server (NTRS)

Ross, Kent; Blonski, Slawomir; Holekamp, Kara; Pagnutti, Mary; Zanoni, Vicki; Carver, David; Fendley, Debbie; Smith, Charles

2004-01-01

NASA at Stennis Space Center (SSC) established a Space Act Agreement with Orbital Sciences Corporation (OSC) and ORBIMAGE Inc. to collaborate on the characterization of the OrbView-3 system and its imagery products and to develop characterization techniques further. In accordance with the agreement, NASA performed an independent radiometric, spatial, and geopositional accuracy assessment of OrbView-3 imagery acquired before completion of the system's initial on-orbit checkout. OSC acquired OrbView-3 imagery over SSC from July 2003 through January 2004, and NASA collected ground reference information coincident with many of these acquisitions. After evaluating all acquisitions, NASA deemed two multispectral images and five panchromatic images useful for characterization. NASA then performed radiometric, spatial, and geopositional characterizations.

Spatial Abilities of High-School Students in the Perception of Geologic Structures.

ERIC Educational Resources Information Center

Kali, Yael; Orion, Nir

1996-01-01

Characterizes specific spatial abilities required in geology studies through the examination of the performance of high school students in solving structural geology problems on the geologic spatial ability test (GeoSAT). Concludes that visual penetration ability and the ability to perceive the spatial configuration of the structure are…

Assessing the expected effects of wildfire on vegetation condition on the Bridger-Teton National Forest, Wyoming, USA

Treesearch

J. H. Scott; D. J. Helmbrecht; M. P. Thompson

2014-01-01

Characterizing wildfire risk to a fire-adapted ecosystem presents particular challenges due to its broad spatial extent, inherent complexity, and the difficulty in defining wildfire-induced losses and benefits. Our approach couples stochastic wildfire simulation with a vegetation condition assessment framework to estimate the conditional and expected response of...

Analysis of Coupled Model Uncertainties in Source to Dose Modeling of Human Exposures to Ambient Air Pollution: a PM2.5 Case-Study

EPA Science Inventory

Quantitative assessment of human exposures and health effects due to air pollution involve detailed characterization of impacts of air quality on exposure and dose. A key challenge is to integrate these three components on a consistent spatial and temporal basis taking into acco...

Characterizing age-related decline of recognition memory and brain activation profile in mice.

PubMed

Belblidia, Hassina; Leger, Marianne; Abdelmalek, Abdelouadoud; Quiedeville, Anne; Calocer, Floriane; Boulouard, Michel; Jozet-Alves, Christelle; Freret, Thomas; Schumann-Bard, Pascale

2018-06-01

Episodic memory decline is one of the earlier deficits occurring during normal aging in humans. The question of spatial versus non-spatial sensitivity to age-related memory decline is of importance for a full understanding of these changes. Here, we characterized the effect of normal aging on both non-spatial (object) and spatial (object location) memory performances as well as on associated neuronal activation in mice. Novel-object (NOR) and object-location (OLR) recognition tests, respectively assessing the identity and spatial features of object memory, were examined at different ages. We show that memory performances in both tests were altered by aging as early as 15 months of age: NOR memory was partially impaired whereas OLR memory was found to be fully disrupted at 15 months of age. Brain activation profiles were assessed for both tests using immunohistochemical detection of c-Fos (neuronal activation marker) in 3and 15 month-old mice. Normal performances in NOR task by 3 month-old mice were associated to an activation of the hippocampus and a trend towards an activation in the perirhinal cortex, in a way that did significantly differ with 15 month-old mice. During OLR task, brain activation took place in the hippocampus in 3 month-old but not significantly in 15 month-old mice, which were fully impaired at this task. These differential alterations of the object- and object-location recognition memory may be linked to differential alteration of the neuronal networks supporting these tasks. Copyright © 2018 Elsevier Inc. All rights reserved.

Shallow cumulus rooted in photosynthesis

NASA Astrophysics Data System (ADS)

Vila-Guerau Arellano, J.; Ouwersloot, H.; Horn, G.; Sikma, M.; Jacobs, C. M.; Baldocchi, D.

2014-12-01

We investigate the interaction between plant evapotranspiration, controlled by photosynthesis (for a low vegetation cover by C3 and C4 grasses), and the moist thermals that are responsible for the formation and development of shallow cumulus clouds (SCu). We perform systematic numerical experiments at fine spatial scales using large-eddy simulations explicitly coupled to a plant-physiology model. To break down the complexity of the vegetation-atmospheric system at the diurnal scales, we design the following experiments with increasing complexity: (a) clouds that are transparent to radiation, (b) clouds that shade the surface from the incoming shortwave radiation and (c) plant stomata whose apertures react with an adjustment in time to cloud perturbations. The shading by SCu leads to a strong spatial variability in photosynthesis and the surface energy balance. As a result, experiment (b) simulates SCu that are characterized by less extreme and less skewed values of the liquid water path and cloud-base height. These findings are corroborated by the calculation of characteristics lengths scales of the thermals and clouds using autocorrelation and spectral analysis methods. We find that experiments (a) and (b) are characterized by similar cloud cover evolution, but different cloud population characteristics. Experiment (b), including cloud shading, is characterized by smaller clouds, but closer to each other. By performing a sensitivity analysis on the exchange of water vapor and carbon dioxide at the canopy level, we show that the larger water-use efficiency of C4 grass leads to two opposing effects that directly influence boundary-layer clouds: the thermals below the clouds are more vigorous and deeper driven by a larger buoyancy surface flux (positive effect), but are characterized by less moisture content (negative effect). We conclude that under the investigated mid-latitude atmospheric and well-watered soil conditions, SCu over C4 grass fields is characterized by larger cloud cover and an enhanced liquid water path compared to C3 grass fields.

Modelling based on Spatial Impulse Response Model for Optimization of Inter Digital Transducers (SAW Sensors) for Non Destructive Testing

NASA Astrophysics Data System (ADS)

Fall, D.; Duquennoy, M.; Ouaftouh, M.; Piwakowski, B.; Jenot, F.

This study deals with modelling SAW-IDT transducers for their optimization. These sensors are specifically developed to characterize properties of thin layers, coatings and functional surfaces. Among the methods of characterization, the ultrasonic methods using Rayleigh surface waves are particularly interesting because the propagation of these waves is close to the surface of material and the energy is concentrated within a layer under the surface of about one wavelength thick. In order to characterize these coatings and structures, it is necessary to work in high frequencies, this is why in this study, SAW-IDT sensors are realized for surface acoustic wave generation. For optimization of these SAW-IDT sensors, particularly their band-width, it is necessary to study various IDT configurations by varying the number of electrodes, dimensions of the electrodes, their shapes and spacings. Thus it is necessary to implement effective and rapid technique for modelling. The originality of this study is to develop simulation tools based on Spatial Impulse Response model. Therefore it will be possible to reduce considerably computing time and results are obtained in a few seconds, instead of several hours (or days) by using finite element method. In order to validate this method, theoretical and experimental results are compared with finite element method and Interferometric measurements. The results obtained show a good overall concordance and confirm effectiveness of suggested method.

Spatially distributed characterization of hyporheic solute transport during baseflow recession in a headwater mountain stream using electrical geophysical imaging

Treesearch

Adam S. Ward; Michael N. Gooseff; Michael Fitzgerald; Thomas J. Voltz; Kamini Singha

2014-01-01

The transport of solutes along hyporheic flowpaths is recognized as central to numerous biogeochemical cycles, yet our understanding of how this transport changes with baseflow recession, particularly in a spatially distributed manner, is limited. We conducted four steady-state solute tracer injections and collected electrical resistivity data to characterize hyporheic...

Temporal and spatial characterization of zenith total delay (ZTD) in North Europe

NASA Astrophysics Data System (ADS)

Stoew, B.; Elgered, G.

2003-04-01

The estimates of ZTD are often treated as realizations of random walk stochastic processes. We derive the corresponding process parameters for 34 different locations in North Europe using two measurement techniques - Global Positioning System (GPS) and Water Vapor Radiometer (WVR). GPS-estimated ZTD is an excellent candidate for data assimilation in numerical weather prediction (NWP) models in terms of both spatial and temporal resolution. We characterize the long term behavior of the ZTD as a function of site latitude and height. The spatial characteristics of the ZTD are studied as a function of site separation and season. We investigate the influence of the time-interpolated atmospheric pressure data used for the estimation of zenith wet delay (ZWD) from ZTD. Characterization of extreme atmospheric events can aid the development of an early warning system. We consider two types of extreme meteorological phenomena with regard to their spatial scales. The first type concerns larger regions (including several GPS sites); the extreme weather is characterized by intense precipitation which may result in a flood. The second type is related to local variations in the ZWD/ZTD and can be used for detection/monitoring of passing atmospheric fronts.

Apparatus for characterizing the temporo-spatial properties of a dynamic fluid front and method thereof

DOEpatents

Battiste, Richard L.

2007-12-25

Methods and apparatus are described for characterizing the temporal-spatial properties of a dynamic fluid front within a mold space while the mold space is being filled with fluid. A method includes providing a mold defining a mold space and having one or more openings into the mold space; heating a plurality of temperature sensors that extend into the mold space; injecting a fluid into the mold space through the openings, the fluid experiencing a dynamic fluid front while filling the mold space with the fluid; and characterizing temporal-spatial properties of the dynamic fluid front by monitoring a temperature of each of the plurality of heated temperature sensors while the mold space is being filled with the fluid. An apparatus includes a mold defining a mold space; one or more openings for introducing a fluid into the mold space and filling the mold space with the fluid, the fluid experiencing a dynamic fluid front while filling the mold space; a plurality of heated temperature sensors extending into the mold space; and a computer coupled to the plurality of heated temperature sensors for characterizing the temporal-spatial properties of the dynamic fluid front.

Apparatus for characterizing the temporo-spatial properties of a dynamic fluid front and method thereof

DOEpatents

Battiste, Richard L

2013-12-31

Methods and apparatus are described for characterizing the temporal-spatial properties of a dynamic fluid front within a mold space while the mold space is being filled with fluid. A method includes providing a mold defining a mold space and having one or more openings into the mold space; heating a plurality of temperature sensors that extend into the mold space; injecting a fluid into th emold space through the openings, the fluid experiencing a dynamic fluid front while filling the mold space with a fluid; and characterizing temporal-spatial properties of the dynamic fluid front by monitoring a termperature of each of the plurality of heated temperature sensors while the mold space is being filled with the fluid. An apparatus includes a mold defining a mold space; one or more openings for introducing a fluid into th emold space and filling the mold space with the fluid, the fluid experiencing a dynamic fluid front while filling the mold space; a plurality of heated temperature sensors extending into the mold space; and a computer coupled to the plurality of heated temperature sensors for characterizing the temporal-spatial properties of the dynamic fluid front.

Measuring Spatial Variability of Vapor Flux to Characterize Vadose-zone VOC Sources: Flow-cell Experiments

DOE PAGES

Mainhagu, Jon; Morrison, C.; Truex, Michael J.; ...

2014-08-05

A method termed vapor-phase tomography has recently been proposed to characterize the distribution of volatile organic contaminant mass in vadose-zone source areas, and to measure associated three-dimensional distributions of local contaminant mass discharge. The method is based on measuring the spatial variability of vapor flux, and thus inherent to its effectiveness is the premise that the magnitudes and temporal variability of vapor concentrations measured at different monitoring points within the interrogated area will be a function of the geospatial positions of the points relative to the source location. A series of flow-cell experiments was conducted to evaluate this premise. Amore » well-defined source zone was created by injection and extraction of a non-reactive gas (SF6). Spatial and temporal concentration distributions obtained from the tests were compared to simulations produced with a mathematical model describing advective and diffusive transport. Tests were conducted to characterize both areal and vertical components of the application. Decreases in concentration over time were observed for monitoring points located on the opposite side of the source zone from the local–extraction point, whereas increases were observed for monitoring points located between the local–extraction point and the source zone. We found that the results illustrate that comparison of temporal concentration profiles obtained at various monitoring points gives a general indication of the source location with respect to the extraction and monitoring points.« less

Comparative study of large scale simulation of underground explosions inalluvium and in fractured granite using stochastic characterization

NASA Astrophysics Data System (ADS)

Vorobiev, O.; Ezzedine, S. M.; Antoun, T.; Glenn, L.

2014-12-01

This work describes a methodology used for large scale modeling of wave propagation fromunderground explosions conducted at the Nevada Test Site (NTS) in two different geological settings:fractured granitic rock mass and in alluvium deposition. We show that the discrete nature of rockmasses as well as the spatial variability of the fabric of alluvium is very important to understand groundmotions induced by underground explosions. In order to build a credible conceptual model of thesubsurface we integrated the geological, geomechanical and geophysical characterizations conductedduring recent test at the NTS as well as historical data from the characterization during the undergroundnuclear test conducted at the NTS. Because detailed site characterization is limited, expensive and, insome instances, impossible we have numerically investigated the effects of the characterization gaps onthe overall response of the system. We performed several computational studies to identify the keyimportant geologic features specific to fractured media mainly the joints; and those specific foralluvium porous media mainly the spatial variability of geological alluvium facies characterized bytheir variances and their integral scales. We have also explored common key features to both geologicalenvironments such as saturation and topography and assess which characteristics affect the most theground motion in the near-field and in the far-field. Stochastic representation of these features based onthe field characterizations have been implemented in Geodyn and GeodynL hydrocodes. Both codeswere used to guide site characterization efforts in order to provide the essential data to the modelingcommunity. We validate our computational results by comparing the measured and computed groundmotion at various ranges. This work performed under the auspices of the U.S. Department of Energy by Lawrence LivermoreNational Laboratory under Contract DE-AC52-07NA27344.

Guidance of spatial attention by incidental learning and endogenous cuing

PubMed Central

Jiang, Yuhong V.; Swallow, Khena M.; Rosenbaum, Gail M.

2012-01-01

Our visual system is highly sensitive to regularities in the environment. Locations that were important in one’s previous experience are often prioritized during search, even though observers may not be aware of the learning. In this study we characterized the guidance of spatial attention by incidental learning of a target’s spatial probability, and examined the interaction between endogenous cuing and probability cuing. Participants searched for a target (T) among distractors (L’s). The target was more often located in one region of the screen than in others. We found that search RT was faster when the target appeared in the high-frequency region rather than the low-frequency regions. This difference increased when there were more items on the display, suggesting that probability cuing guides spatial attention. Additional data indicated that on their own, probability cuing and endogenous cuing (e.g., a central arrow that predicted a target’s location) were similarly effective at guiding attention. However, when both cues were presented at once, probability cuing was largely eliminated. Thus, although both incidental learning and endogenous cuing can effectively guide attention, endogenous cuing takes precedence over incidental learning. PMID:22506784

Birefringent breakup of Dirac fermions on a square optical lattice

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kennett, Malcolm P.; Komeilizadeh, Nazanin; Kaveh, Kamran

2011-05-15

We introduce a lattice model for fermions in a spatially periodic magnetic field that also has spatially periodic hopping amplitudes. We discuss how this model might be realized with cold atoms in an artificial magnetic field on a square optical lattice. When there is an average flux of half a flux quantum per plaquette, the spectrum of low-energy excitations can be described by massless Dirac fermions in which the usually doubly degenerate Dirac cones split into cones with different ''speeds of light.'' These gapless birefringent Dirac fermions arise because of broken chiral symmetry in the kinetic energy term of themore » effective low-energy Hamiltonian. We characterize the effects of various perturbations to the low-energy spectrum, including staggered potentials, interactions, and domain-wall topological defects.« less

A spatial model to assess the effects of hydropower operations on Columbia River fall Chinook Salmon spawning habitat

USGS Publications Warehouse

Hatten, James R.; Tiffan, Kenneth F.; Anglin, Donald R.; Haeseker, Steven L.; Skalicky, Joseph J.; Schaller, Howard

2009-01-01

Priest Rapids Dam on the Columbia River produces large daily and hourly streamflow fluctuations throughout the Hanford Reach during the period when fall Chinook salmon Oncorhynchus tshawytscha are selecting spawning habitat, constructing redds, and actively engaged in spawning. Concern over the detrimental effects of these fluctuations prompted us to quantify the effects of variable flows on the amount and persistence of fall Chinook salmon spawning habitat in the Hanford Reach. Specifically, our goal was to develop a management tool capable of quantifying the effects of current and alternative hydrographs on predicted spawning habitat in a spatially explicit manner. Toward this goal, we modeled the water velocities and depths that fall Chinook salmon experienced during the 2004 spawning season, plus what they would probably have experienced under several alternative (i.e., synthetic) hydrographs, using both one- and two-dimensional hydrodynamic models. To estimate spawning habitat under existing or alternative hydrographs, we used cell-based modeling and logistic regression to construct and compare numerous spatial habitat models. We found that fall Chinook salmon were more likely to spawn at locations where velocities were persistently greater than 1 m/s and in areas where fluctuating water velocities were reduced. Simulations of alternative dam operations indicate that the quantity of spawning habitat is expected to increase as streamflow fluctuations are reduced during the spawning season. The spatial habitat models that we developed provide management agencies with a quantitative tool for predicting, in a spatially explicit manner, the effects of different flow regimes on fall Chinook salmon spawning habitat in the Hanford Reach. In addition to characterizing temporally varying habitat conditions, our research describes an analytical approach that could be applied in other highly variable aquatic systems.

Decreased Leftward ‘Aiming’ Motor-Intentional Spatial Cuing in Traumatic Brain Injury

PubMed Central

Wagner, Daymond; Eslinger, Paul J.; Barrett, A. M.

2016-01-01

Objective To characterize the mediation of attention and action in space following traumatic brain injury (TBI). Method Two exploratory analyses were performed to determine the influence of spatial ‘Aiming’ motor versus spatial ‘Where’ bias on line bisection in TBI participants. The first experiment compared performance according to severity and location of injury in TBI. The second experiment examined bisection performance in a larger TBI sample against a matched control group. In both experiments, participants bisected lines in near and far space using an apparatus that allowed for the fractionation of spatial Aiming versus Where error components. Results In the first experiment, participants with severe injuries tended to incur rightward error when starting from the right in far space, compared with participants with mild injuries. In the second experiment, when performance was examined at the individual level, more participants with TBI tended to incur rightward motor error compared to controls. Conclusions TBI may cause frontal-subcortical cognitive dysfunction and asymmetric motor perseveration, affecting spatial Aiming bias on line bisection. Potential effects on real-world function need further investigation. PMID:27571220

Quantitative characterization of the spatial distribution of particles in materials: Application to materials processing

NASA Technical Reports Server (NTRS)

Parse, Joseph B.; Wert, J. A.

1991-01-01

Inhomogeneities in the spatial distribution of second phase particles in engineering materials are known to affect certain mechanical properties. Progress in this area has been hampered by the lack of a convenient method for quantitative description of the spatial distribution of the second phase. This study intends to develop a broadly applicable method for the quantitative analysis and description of the spatial distribution of second phase particles. The method was designed to operate on a desktop computer. The Dirichlet tessellation technique (geometrical method for dividing an area containing an array of points into a set of polygons uniquely associated with the individual particles) was selected as the basis of an analysis technique implemented on a PC. This technique is being applied to the production of Al sheet by PM processing methods; vacuum hot pressing, forging, and rolling. The effect of varying hot working parameters on the spatial distribution of aluminum oxide particles in consolidated sheet is being studied. Changes in distributions of properties such as through-thickness near-neighbor distance correlate with hot-working reduction.

Attention enhances contrast appearance via increased input baseline of neural responses

PubMed Central

Cutrone, Elizabeth K.; Heeger, David J.; Carrasco, Marisa

2014-01-01

Covert spatial attention increases the perceived contrast of stimuli at attended locations, presumably via enhancement of visual neural responses. However, the relation between perceived contrast and the underlying neural responses has not been characterized. In this study, we systematically varied stimulus contrast, using a two-alternative, forced-choice comparison task to probe the effect of attention on appearance across the contrast range. We modeled performance in the task as a function of underlying neural contrast-response functions. Fitting this model to the observed data revealed that an increased input baseline in the neural responses accounted for the enhancement of apparent contrast with spatial attention. PMID:25549920

Transverse flow induced by inhomogeneous magnetic fields in the Bjorken expansion

NASA Astrophysics Data System (ADS)

Pu, Shi; Yang, Di-Lun

2016-03-01

We investigate the magnetohydrodynamics in the presence of an external magnetic field following the power-law decay in proper time and having spatial inhomogeneity characterized by a Gaussian distribution in one of transverse coordinates under the Bjorken expansion. The leading-order solution is obtained in the weak-field approximation, where both energy density and fluid velocity are modified. It is found that the spatial gradient of the magnetic field results in transverse flow, where the flow direction depends on the decay exponents of the magnetic field. We suggest that such a magnetic-field-induced effect might influence anisotropic flow in heavy ion collisions.

Microcontact Printing Patterning of an HOPG Surface by an Inverse Electron Demand Diels-Alder Reaction.

PubMed

Zhu, Jun; Hiltz, Jonathan; Tefashe, Ushula M; Mauzeroll, Janine; Lennox, R Bruce

2018-06-21

The chemical modification of an sp 2 hybridized carbon surface in a controllable manner is very challenging but also crucial for many applications. An inverse electron demand Diels-Alder (IEDDA) reaction using microcontact printing technique is introduced to spatially control the modification of a highly ordered pyrolytic graphite (HOPG) surface under ambient conditions. The covalent modification was characterized by Raman spectroscopy, XPS, and SECM. Tetrazine derivatives can effectively react with an HOPG surface and with microcontact printing methods resulting in spatially patterned surfaces being produced with micrometer-scale resolution. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Investigation of the spatial distribution of second-order nonlinearity in thermally poled optical fibers.

PubMed

An, Honglin; Fleming, Simon

2005-05-02

The spatial distribution of second-order nonlinearity in thermally poled optical fibers was characterized by second-harmonic microscopy. The second-order nonlinearity was found to be confined to a thin layer close to the anode surface and progressed further into the silica as the poling time increased. Position uncertainty of the anode metal wire was observed to have an effect, as the nonlinear layers were found not always symmetrically located around the nearest points between the anode and cathode. Optical microscopy results were obtained on etched poled fiber cross-sections and compared with those from second-harmonic microscopy.

Small worlds in space: Synchronization, spatial and relational modularity

NASA Astrophysics Data System (ADS)

Brede, M.

2010-06-01

In this letter we investigate networks that have been optimized to realize a trade-off between enhanced synchronization and cost of wire to connect the nodes in space. Analyzing the evolved arrangement of nodes in space and their corresponding network topology, a class of small-world networks characterized by spatial and network modularity is found. More precisely, for low cost of wire optimal configurations are characterized by a division of nodes into two spatial groups with maximum distance from each other, whereas network modularity is low. For high cost of wire, the nodes organize into several distinct groups in space that correspond to network modules connected on a ring. In between, spatially and relationally modular small-world networks are found.

Spatially-Explicit Simulation Modeling of Ecological Response to Climate Change: Methodological Considerations in Predicting Shifting Population Dynamics of Infectious Disease Vectors.

PubMed

Dhingra, Radhika; Jimenez, Violeta; Chang, Howard H; Gambhir, Manoj; Fu, Joshua S; Liu, Yang; Remais, Justin V

2013-09-01

Poikilothermic disease vectors can respond to altered climates through spatial changes in both population size and phenology. Quantitative descriptors to characterize, analyze and visualize these dynamic responses are lacking, particularly across large spatial domains. In order to demonstrate the value of a spatially explicit, dynamic modeling approach, we assessed spatial changes in the population dynamics of Ixodes scapularis , the Lyme disease vector, using a temperature-forced population model simulated across a grid of 4 × 4 km cells covering the eastern United States, using both modeled (Weather Research and Forecasting (WRF) 3.2.1) baseline/current (2001-2004) and projected (Representative Concentration Pathway (RCP) 4.5 and RCP 8.5; 2057-2059) climate data. Ten dynamic population features (DPFs) were derived from simulated populations and analyzed spatially to characterize the regional population response to current and future climate across the domain. Each DPF under the current climate was assessed for its ability to discriminate observed Lyme disease risk and known vector presence/absence, using data from the US Centers for Disease Control and Prevention. Peak vector population and month of peak vector population were the DPFs that performed best as predictors of current Lyme disease risk. When examined under baseline and projected climate scenarios, the spatial and temporal distributions of DPFs shift and the seasonal cycle of key questing life stages is compressed under some scenarios. Our results demonstrate the utility of spatial characterization, analysis and visualization of dynamic population responses-including altered phenology-of disease vectors to altered climate.

Spatially-Explicit Simulation Modeling of Ecological Response to Climate Change: Methodological Considerations in Predicting Shifting Population Dynamics of Infectious Disease Vectors

PubMed Central

Dhingra, Radhika; Jimenez, Violeta; Chang, Howard H.; Gambhir, Manoj; Fu, Joshua S.; Liu, Yang; Remais, Justin V.

2014-01-01

Poikilothermic disease vectors can respond to altered climates through spatial changes in both population size and phenology. Quantitative descriptors to characterize, analyze and visualize these dynamic responses are lacking, particularly across large spatial domains. In order to demonstrate the value of a spatially explicit, dynamic modeling approach, we assessed spatial changes in the population dynamics of Ixodes scapularis, the Lyme disease vector, using a temperature-forced population model simulated across a grid of 4 × 4 km cells covering the eastern United States, using both modeled (Weather Research and Forecasting (WRF) 3.2.1) baseline/current (2001–2004) and projected (Representative Concentration Pathway (RCP) 4.5 and RCP 8.5; 2057–2059) climate data. Ten dynamic population features (DPFs) were derived from simulated populations and analyzed spatially to characterize the regional population response to current and future climate across the domain. Each DPF under the current climate was assessed for its ability to discriminate observed Lyme disease risk and known vector presence/absence, using data from the US Centers for Disease Control and Prevention. Peak vector population and month of peak vector population were the DPFs that performed best as predictors of current Lyme disease risk. When examined under baseline and projected climate scenarios, the spatial and temporal distributions of DPFs shift and the seasonal cycle of key questing life stages is compressed under some scenarios. Our results demonstrate the utility of spatial characterization, analysis and visualization of dynamic population responses—including altered phenology—of disease vectors to altered climate. PMID:24772388

Soil moisture observations using L-, C-, and X-band microwave radiometers

NASA Astrophysics Data System (ADS)

Bolten, John Dennis

The purpose of this thesis is to further the current understanding of soil moisture remote sensing under varying conditions using L-, C-, and X-band. Aircraft and satellite instruments are used to investigate the effects of frequency and spatial resolution on soil moisture sensitivity. The specific objectives of the research are to examine multi-scale observed and modeled microwave radiobrightness, evaluate new EOS Aqua Advanced Microwave Scanning Radiometer (AMSR-E) brightness temperature and soil moisture retrievals, and examine future satellite-based technologies for soil moisture sensing. The cycling of Earth's water, energy and carbon is vital to understanding global climate. Over land, these processes are largely dependent on the amount of moisture within the top few centimeters of the soil. However, there are currently no methods available that can accurately characterize Earth's soil moisture layer at the spatial scales or temporal resolutions appropriate for climate modeling. The current work uses ground truth, satellite and aircraft remote sensing data from three large-scale field experiments having different land surface, topographic and climate conditions. A physically-based radiative transfer model is used to simulate the observed aircraft and satellite measurements using spatially and temporally co-located surface parameters. A robust analysis of surface heterogeneity and scaling is possible due to the combination of multiple datasets from a range of microwave frequencies and field conditions. Accurate characterization of spatial and temporal variability of soil moisture during the three field experiments is achieved through sensor calibration and algorithm validation. Comparisons of satellite observations and resampled aircraft observations are made using soil moisture from a Numerical Weather Prediction (NWP) model in order to further demonstrate a soil moisture correlation where point data was unavailable. The influence of vegetation, spatial scaling, and surface heterogeneity on multi-scale soil moisture prediction is presented. This work demonstrates that derived soil moisture using remote sensing provides a better coverage of soil moisture spatial variability than traditional in-situ sensors. Effects of spatial scale were shown to be less significant than frequency on soil moisture sensitivity. Retrievals of soil moisture using the current methods proved inadequate under some conditions; however, this study demonstrates the need for concurrent spaceborne frequencies including L-, C, and X-band.

Spatial patterning in PM2.5 constituents under an inversion-focused sampling design across an urban area of complex terrain

PubMed Central

Tunno, Brett J; Dalton, Rebecca; Michanowicz, Drew R; Shmool, Jessie L C; Kinnee, Ellen; Tripathy, Sheila; Cambal, Leah; Clougherty, Jane E

2016-01-01

Health effects of fine particulate matter (PM2.5) vary by chemical composition, and composition can help to identify key PM2.5 sources across urban areas. Further, this intra-urban spatial variation in concentrations and composition may vary with meteorological conditions (e.g., mixing height). Accordingly, we hypothesized that spatial sampling during atmospheric inversions would help to better identify localized source effects, and reveal more distinct spatial patterns in key constituents. We designed a 2-year monitoring campaign to capture fine-scale intra-urban variability in PM2.5 composition across Pittsburgh, PA, and compared both spatial patterns and source effects during “frequent inversion” hours vs 24-h weeklong averages. Using spatially distributed programmable monitors, and a geographic information systems (GIS)-based design, we collected PM2.5 samples across 37 sampling locations per year to capture variation in local pollution sources (e.g., proximity to industry, traffic density) and terrain (e.g., elevation). We used inductively coupled plasma mass spectrometry (ICP-MS) to determine elemental composition, and unconstrained factor analysis to identify source suites by sampling scheme and season. We examined spatial patterning in source factors using land use regression (LUR), wherein GIS-based source indicators served to corroborate factor interpretations. Under both summer sampling regimes, and for winter inversion-focused sampling, we identified six source factors, characterized by tracers associated with brake and tire wear, steel-making, soil and road dust, coal, diesel exhaust, and vehicular emissions. For winter 24-h samples, four factors suggested traffic/fuel oil, traffic emissions, coal/industry, and steel-making sources. In LURs, as hypothesized, GIS-based source terms better explained spatial variability in inversion-focused samples, including a greater contribution from roadway, steel, and coal-related sources. Factor analysis produced source-related constituent suites under both sampling designs, though factors were more distinct under inversion-focused sampling. PMID:26507005

Spatial resolution measurements of the advanced radiographic capability x-ray imaging system at energies relevant to Compton radiography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, G. N.; Izumi, N.; Landen, O. L.

2016-08-03

Compton radiography provides a means to measure the integrity, ρR and symmetry of the DT fuel in an inertial confinement fusion implosion near peak compression. Upcoming experiments at the National Ignition Facility will use the ARC (Advanced Radiography Capability) laser to drive backlighter sources for Compton radiography experiments, and will use the newly commissioned AXIS (ARC X-ray Imaging System) instrument as the detector. AXIS uses a dual-MCP (micro channel plate) to provide gating and high DQE at the 40–200keV x-ray range required for Compton radiography, but introduces many effects that contribute to the spatial resolution. Here, experiments were performed atmore » energies relevant to Compton radiography to begin characterization of the spatial resolution of the AXIS diagnostic.« less

Histomolecular interpretation of pleomorphic adenomas of the salivary gland by matrix-assisted laser desorption ionization imaging and spatial segmentation.

PubMed

Ernst, Günther; Guntinas-Lichius, Orlando; Hauberg-Lotte, Lena; Trede, Dennis; Becker, Michael; Alexandrov, Theodore; von Eggeling, Ferdinand

2015-07-01

Despite efforts in localization of key proteins using immunohistochemistry, the complex proteomic composition of pleomorphic adenomas has not yet been characterized. Matrix-assisted laser desorption/ionization imaging mass spectrometry (MALDI imaging) allows label-free and spatially resolved detection of hundreds of proteins directly from tissue sections and of histomorphological regions by finding colocalized molecular signals. Spatial segmentation of MALDI imaging data is an algorithmic method for finding regions of similar proteomic composition as functionally similar regions. We investigated 2 pleomorphic adenomas by applying spatial segmentation to the MALDI imaging data of tissue sections. The spatial segmentation subdivided the tissue in a good accordance with the tissue histology. Numerous molecular signals colocalized with histologically defined tissue regions were found. Our study highlights the cellular transdifferentiation within the pleomorphic adenoma. It could be shown that spatial segmentation of MALDI imaging data is a promising approach in the emerging field of digital histological analysis and characterization of tumors. © 2014 Wiley Periodicals, Inc.

Meteorology-induced variations in the spatial behavior of summer ozone pollution in Central California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jin, Ling; Harley, Robert A.; Brown, Nancy J.

Cluster analysis was applied to daily 8 h ozone maxima modeled for a summer season to characterize meteorology-induced variations in the spatial distribution of ozone. Principal component analysis is employed to form a reduced dimension set to describe and interpret ozone spatial patterns. The first three principal components (PCs) capture {approx}85% of total variance, with PC1 describing a general spatial trend, and PC2 and PC3 each describing a spatial contrast. Six clusters were identified for California's San Joaquin Valley (SJV) with two low, three moderate, and one high-ozone cluster. The moderate ozone clusters are distinguished by elevated ozone levels inmore » different parts of the valley: northern, western, and eastern, respectively. The SJV ozone clusters have stronger coupling with the San Francisco Bay area (SFB) than with the Sacramento Valley (SV). Variations in ozone spatial distributions induced by anthropogenic emission changes are small relative to the overall variations in ozone amomalies observed for the whole summer. Ozone regimes identified here are mostly determined by the direct and indirect meteorological effects. Existing measurement sites are sufficiently representative to capture ozone spatial patterns in the SFB and SV, but the western side of the SJV is under-sampled.« less

What Do They Have in Common? Drivers of Streamflow Spatial Correlation and Prediction of Flow Regimes in Ungauged Locations

NASA Astrophysics Data System (ADS)

Betterle, A.; Radny, D.; Schirmer, M.; Botter, G.

2017-12-01

The spatial correlation of daily streamflows represents a statistical index encapsulating the similarity between hydrographs at two arbitrary catchment outlets. In this work, a process-based analytical framework is utilized to investigate the hydrological drivers of streamflow spatial correlation through an extensive application to 78 pairs of stream gauges belonging to 13 unregulated catchments in the eastern United States. The analysis provides insight on how the observed heterogeneity of the physical processes that control flow dynamics ultimately affect streamflow correlation and spatial patterns of flow regimes. Despite the variability of recession properties across the study catchments, the impact of heterogeneous drainage rates on the streamflow spatial correlation is overwhelmed by the spatial variability of frequency and intensity of effective rainfall events. Overall, model performances are satisfactory, with root mean square errors between modeled and observed streamflow spatial correlation below 10% in most cases. We also propose a method for estimating streamflow correlation in the absence of discharge data, which proves useful to predict streamflow regimes in ungauged areas. The method consists in setting a minimum threshold on the modeled flow correlation to individuate hydrologically similar sites. Catchment outlets that are most correlated (ρ>0.9) are found to be characterized by analogous streamflow distributions across a broad range of flow regimes.

Modality-independent coding of spatial layout in the human brain

PubMed Central

Wolbers, Thomas; Klatzky, Roberta L.; Loomis, Jack M.; Wutte, Magdalena G.; Giudice, Nicholas A.

2011-01-01

Summary In many non-human species, neural computations of navigational information such as position and orientation are not tied to a specific sensory modality [1, 2]. Rather, spatial signals are integrated from multiple input sources, likely leading to abstract representations of space. In contrast, the potential for abstract spatial representations in humans is not known, as most neuroscientific experiments on human navigation have focused exclusively on visual cues. Here, we tested the modality independence hypothesis with two fMRI experiments that characterized computations in regions implicated in processing spatial layout [3]. According to the hypothesis, such regions should be recruited for spatial computation of 3-D geometric configuration, independent of a specific sensory modality. In support of this view, sighted participants showed strong activation of the parahippocampal place area (PPA) and the retrosplenial cortex (RSC) for visual and haptic exploration of information-matched scenes but not objects. Functional connectivity analyses suggested that these effects were not related to visual recoding, which was further supported by a similar preference for haptic scenes found with blind participants. Taken together, these findings establish the PPA/RSC network as critical in modality-independent spatial computations and provide important evidence for a theory of high-level abstract spatial information processing in the human brain. PMID:21620708

Embodied Interactions in Human-Machine Decision Making for Situation Awareness Enhancement Systems

DTIC Science & Technology

2016-06-09

characterize differences in spatial navigation strategies in a complex task, the Traveling Salesman Problem (TSP). For the second year, we developed...visual processing, leading to better solutions for spatial optimization problems . I will develop a framework to determine which body expressions best...methods include systematic characterization of gestures during complex problem solving. 15. SUBJECT TERMS Embodied interaction, gestures, one-shot

Contaminant transport in wetland flows with bulk degradation and bed absorption

NASA Astrophysics Data System (ADS)

Wang, Ping; Chen, G. Q.

2017-09-01

Ecological degradation and absorption are ubiquitous and exert considerable influence on the contaminant transport in natural and constructed wetland flows. It creates an increased demand on models to accurately characterize the spatial concentration distribution of the transport process. This work extends a method of spatial concentration moments by considering the non-uniform longitudinal solute displacements along the vertical direction, and analytically determines the spatial concentration distribution in the very initial stage since source release with effects of bulk degradation and bed absorption. The present method is demonstrated to bear a more accurate prediction especially in the initial stage through convergence analysis of Hermite polynomials. Results reveal that contaminant cloud shows to be more contracted and reformed by bed absorption with increasing damping factor of wetland flows. Tremendous vertical concentration variation especially in the downstream of the contaminant cloud remains great even at asymptotic large times. Spatial concentration evolution by the extended method other than the mean by previous studies is potential for various implements associated with contaminant transport with strict environmental standards.

Urban sprawl and fragmentation in Latin America: a dynamic quantification and characterization of spatial patterns.

PubMed

Inostroza, Luis; Baur, Rolf; Csaplovics, Elmar

2013-01-30

South America is one of the most urbanized continents in the world, where almost 84% of the total population lives in cities, more urbanized than North America (82%) and Europe (73%). Spatial dynamics, their structure, main features, land consumption rates, spatial arrangement, fragmentation degrees and comparability, remain mostly unknown for most Latin American cities. Using satellite imagery the main parameters of sprawl are quantified for 10 Latin American cities over a period of 20 years by monitoring growth patterns and identifying spatial metrics to characterize urban development and sprawling features measured with GIS tools. This quantification contributes to a better understanding of urban form in Latin America. A pervasive spatial expansion has been observed, where most of the studied cities are expanding at fast rates with falling densities trend. Although important differences in the rates of land consumption and densities exist, there is an underlying fragmentation trend towards increasing sprawl. These trends of spatial discontinuity may eventually be intensified by further economic development. Urban Sprawl/Latin America/GIS metrics/spatial development. Copyright © 2012 Elsevier Ltd. All rights reserved.

Separated-flow unsteady pressures and forces on elastically responding structures

NASA Technical Reports Server (NTRS)

Coke, C. F.; Riddle, D. W.; Hwang, C.

1977-01-01

Broadband rms, spectral density, and spatial correlation information that characterizes the fluctuating pressures and forces that cause aircraft buffet is presented. The main theme is to show the effects of elasticity. In order to do so, data are presented that were obtained in regions of separated flow on wings of wind-tunnel models of varying stiffness and on the wing of a full-scale aircraft. Reynolds number effects on the pressure fluctuations are also discussed.

Investigating the influence of LiDAR ground surface errors on the utility of derived forest inventories

Treesearch

Wade T. Tinkham; Alistair M. S. Smith; Chad Hoffman; Andrew T. Hudak; Michael J. Falkowski; Mark E. Swanson; Paul E. Gessler

2012-01-01

Light detection and ranging, or LiDAR, effectively produces products spatially characterizing both terrain and vegetation structure; however, development and use of those products has outpaced our understanding of the errors within them. LiDAR's ability to capture three-dimensional structure has led to interest in conducting or augmenting forest inventories with...

Potential effects of forest policies on terrestrial biodiversity in a multiownership province.

Treesearch

T.A. Spies; B.C. McComb; R. Kennedy; M.T. McGrath; K. Olsen; R.J. Pabst

2007-01-01

We used spatial simulation models to evaluate how current and two alternative policies might affect potential biodiversity over 100 years in the Coast Ranges Physiographic Province of Oregon. This 2.3-million-ha province is characterized by a diversity of public and private forest owners, and a wide range of forest policy and management objectives. We evaluated habitat...

On magnetic field strength effect on velocity and turbulence characterization using Phase-Contrast Magnetic Resonance Imaging (PC-MRI)

NASA Astrophysics Data System (ADS)

van de Moortele, Pierre-Francois; Amili, Omid; Coletti, Filippo; Toloui, Mostafa

2017-11-01

Cardiovascular flows are predominantly laminar. Nevertheless, transient and even turbulent flows have been observed in the vicinity of the heart (e.g. valves, ascending aorta, valvular/vascular stenosis). Effective in-vivo hemodynamic-based diagnostics in these sites require both high-resolution velocity measurements (especially in the near-vessel wall regions) and accurate evaluation of blood flow turbulence level (e.g. in terms of TKE). In addition to phase contrast (PC), appropriately designed PC-MRI sequences provide intravoxel incoherent motion encoding, a unique tool for simultaneous, non-invasive evaluation of velocity 3D vector fields and Reynolds stresses in cardiovascular flows in vivo. However, limited spatial and temporal resolution of PC-MRI result in inaccuracies in the estimation of hemodynamics (e.g. WSS) and of flow turbulence characteristics. This study aims to assess whether SNR gains at higher magnetic field could overcome these limits, providing more accurate velocity and turbulence characterization at higher spatial resolution. Experiments are conducted on MR Scanners at 3 and 7 Tesla with a U-bent pipe flow shaped phantom. 3D velocity fields, Reynolds stresses and TKE are analyzed and compared to a reference PIV experiments.

Far-field phase contrast from orbiting objects: Characterizing progenitors of binary mergers

NASA Astrophysics Data System (ADS)

Matthias, P.; Hofmann, R.

2018-05-01

We propose an idea to determine the size of a binary, composed of two compact stars or black holes, its diffractive power, the distance between components, and the distance to an observer, in exploiting the emergence of intensity contrast by free-space propagation when the phase of coherent light from a very distant background source is affected by diffraction. We assume that this effect can be characterized by the projected real part of an effective refractive index n . Here we model the according two-dimensional exit phase-map by a superposition of two Gaussians. In the extreme far field, phase information is captured by scaling functions which are analyzed here. Both spatial and temporal scanning of the intensity contrast are discussed. While the former mode can be used, e.g., to determine the distance to the observer, the latter allows, e.g., one to measure the overall diffractive power of the binary in terms of the particular dependence of a scaling curve on the projected spatial separation between the binary's components. Both modes of observation may be of relevance in monitoring the progenitor dynamics of binary collapse using radio telescopes.

Change of spatial information under rescaling: A case study using multi-resolution image series

NASA Astrophysics Data System (ADS)

Chen, Weirong; Henebry, Geoffrey M.

Spatial structure in imagery depends on a complicated interaction between the observational regime and the types and arrangements of entities within the scene that the image portrays. Although block averaging of pixels has commonly been used to simulate coarser resolution imagery, relatively little attention has been focused on the effects of simple rescaling on spatial structure and the explanation and a possible solution to the problem. Yet, if there are significant differences in spatial variance between rescaled and observed images, it may affect the reliability of retrieved biogeophysical quantities. To investigate these issues, a nested series of high spatial resolution digital imagery was collected at a research site in eastern Nebraska in 2001. An airborne Kodak DCS420IR camera acquired imagery at three altitudes, yielding nominal spatial resolutions ranging from 0.187 m to 1 m. The red and near infrared (NIR) bands of the co-registered image series were normalized using pseudo-invariant features, and the normalized difference vegetation index (NDVI) was calculated. Plots of grain sorghum planted in orthogonal crop row orientations were extracted from the image series. The finest spatial resolution data were then rescaled by averaging blocks of pixels to produce a rescaled image series that closely matched the spatial resolution of the observed image series. Spatial structures of the observed and rescaled image series were characterized using semivariogram analysis. Results for NDVI and its component bands show, as expected, that decreasing spatial resolution leads to decreasing spatial variability and increasing spatial dependence. However, compared to the observed data, the rescaled images contain more persistent spatial structure that exhibits limited variation in both spatial dependence and spatial heterogeneity. Rescaling via simple block averaging fails to consider the effect of scene object shape and extent on spatial information. As the features portrayed by pixels are equally weighted regardless of the shape and extent of the underlying scene objects, the rescaled image retains more of the original spatial information than would occur through direct observation at a coarser sensor spatial resolution. In contrast, for the observed images, due to the effect of the modulation transfer function (MTF) of the imaging system, high frequency features like edges are blurred or lost as the pixel size increases, resulting in greater variation in spatial structure. Successive applications of a low-pass spatial convolution filter are shown to mimic a MTF. Accordingly, it is recommended that such a procedure be applied prior to rescaling by simple block averaging, if insufficient image metadata exist to replicate the net MTF of the imaging system, as might be expected in land cover change analysis studies using historical imagery.

NASA Fundamental Remote Sensing Science Research Program

NASA Technical Reports Server (NTRS)

1984-01-01

The NASA Fundamental Remote Sensing Research Program is described. The program provides a dynamic scientific base which is continually broadened and from which future applied research and development can draw support. In particular, the overall objectives and current studies of the scene radiation and atmospheric effect characterization (SRAEC) project are reviewed. The SRAEC research can be generically structured into four types of activities including observation of phenomena, empirical characterization, analytical modeling, and scene radiation analysis and synthesis. The first three activities are the means by which the goal of scene radiation analysis and synthesis is achieved, and thus are considered priority activities during the early phases of the current project. Scene radiation analysis refers to the extraction of information describing the biogeophysical attributes of the scene from the spectral, spatial, and temporal radiance characteristics of the scene including the atmosphere. Scene radiation synthesis is the generation of realistic spectral, spatial, and temporal radiance values for a scene with a given set of biogeophysical attributes and atmospheric conditions.

Characterization of spatial and temporal variability in hydrochemistry of Johor Straits, Malaysia.

PubMed

Abdullah, Pauzi; Abdullah, Sharifah Mastura Syed; Jaafar, Othman; Mahmud, Mastura; Khalik, Wan Mohd Afiq Wan Mohd

2015-12-15

Characterization of hydrochemistry changes in Johor Straits within 5 years of monitoring works was successfully carried out. Water quality data sets (27 stations and 19 parameters) collected in this area were interpreted subject to multivariate statistical analysis. Cluster analysis grouped all the stations into four clusters ((Dlink/Dmax) × 100<90) and two clusters ((Dlink/Dmax) × 100<80) for site and period similarities. Principal component analysis rendered six significant components (eigenvalue>1) that explained 82.6% of the total variance of the data set. Classification matrix of discriminant analysis assigned 88.9-92.6% and 83.3-100% correctness in spatial and temporal variability, respectively. Times series analysis then confirmed that only four parameters were not significant over time change. Therefore, it is imperative that the environmental impact of reclamation and dredging works, municipal or industrial discharge, marine aquaculture and shipping activities in this area be effectively controlled and managed. Copyright © 2015 Elsevier Ltd. All rights reserved.

Construction and characterization of ultraviolet acousto-optic based femtosecond pulse shapers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mcgrane, Shawn D; Moore, David S; Greenfield, Margo T

2008-01-01

We present all the information necessary for construction and characterization of acousto optic pulse shapers, with a focus on ultraviolet wavelengths, Various radio-frequency drive configurations are presented to allow optimization via knowledgeable trade-off of design features. Detailed performance characteristics of a 267 nm acousto-optic modulator (AOM) based pulse shaper are presented, Practical considerations for AOM based pulse shaping of ultra-broad bandwidth (sub-10 fs) amplified femtosecond pulse shaping are described, with particular attention paid to the effects of the RF frequency bandwidth and optical frequency bandwidth on the spatial dispersion of the output laser pulses.

The contribution of the androgen receptor (AR) in human spatial learning and memory: A study in women with complete androgen insensitivity syndrome (CAIS).

PubMed

Mueller, S C; Verwilst, T; Van Branteghem, A; T'Sjoen, G; Cools, M

2016-02-01

Few studies have examined the impact of androgen insensitivity on human spatial learning and memory. In the present study, we tested 11 women with complete androgen insensitivity syndrome (CAIS), a rare genetic disorder characterized by complete absence of AR activity, and compared their performance against 20 comparison males and 19 comparison females on a virtual analog of the Morris Water Maze task. The results replicated a main sex effect showing that men relative to women were faster in finding the hidden platform and had reduced heading error. Furthermore, findings indicated that mean performance of women with CAIS was between control women and control men, though the differences were not statistically significant. Effect size estimates (and corresponding confidence intervals) of spatial learning trials showed little difference between women with CAIS and control women but CAIS women differed from men, but not women, on two variables, latency to find the platform and first-move latency. No differences between groups were present during visible platform trials or the probe trial, a measure of spatial memory. Moreover, groups also did not differ on estimates of IQ and variability of performance. The findings are discussed in relation to androgen insensitivity in human spatial learning and memory. Copyright © 2015 Elsevier Inc. All rights reserved.

Source characterization and exposure modeling of gas-phase polycyclic aromatic hydrocarbon (PAH) concentrations in Southern California

NASA Astrophysics Data System (ADS)

Masri, Shahir; Li, Lianfa; Dang, Andy; Chung, Judith H.; Chen, Jiu-Chiuan; Fan, Zhi-Hua (Tina); Wu, Jun

2018-03-01

Airborne exposures to polycyclic aromatic hydrocarbons (PAHs) are associated with adverse health outcomes. Because personal air measurements of PAHs are labor intensive and costly, spatial PAH exposure models are useful for epidemiological studies. However, few studies provide adequate spatial coverage to reflect intra-urban variability of ambient PAHs. In this study, we collected 39-40 weekly gas-phase PAH samples in southern California twice in summer and twice in winter, 2009, in order to characterize PAH source contributions and develop spatial models that can estimate gas-phase PAH concentrations at a high resolution. A spatial mixed regression model was constructed, including such variables as roadway, traffic, land-use, vegetation index, commercial cooking facilities, meteorology, and population density. Cross validation of the model resulted in an R2 of 0.66 for summer and 0.77 for winter. Results showed higher total PAH concentrations in winter. Pyrogenic sources, such as fossil fuels and diesel exhaust, were the most dominant contributors to total PAHs. PAH sources varied by season, with a higher fossil fuel and wood burning contribution in winter. Spatial autocorrelation accounted for a substantial amount of the variance in total PAH concentrations for both winter (56%) and summer (19%). In summer, other key variables explaining the variance included meteorological factors (9%), population density (15%), and roadway length (21%). In winter, the variance was also explained by traffic density (16%). In this study, source characterization confirmed the dominance of traffic and other fossil fuel sources to total measured gas-phase PAH concentrations while a spatial exposure model identified key predictors of PAH concentrations. Gas-phase PAH source characterization and exposure estimation is of high utility to epidemiologist and policy makers interested in understanding the health impacts of gas-phase PAHs and strategies to reduce emissions.

Source Characterization and Exposure Modeling of Gas-Phase Polycyclic Aromatic Hydrocarbon (PAH) Concentrations in Southern California.

PubMed

Masri, Shahir; Li, Lianfa; Dang, Andy; Chung, Judith H; Chen, Jiu-Chiuan; Fan, Zhi-Hua Tina; Wu, Jun

2018-03-01

Airborne exposures to polycyclic aromatic hydrocarbons (PAHs) are associated with adverse health outcomes. Because personal air measurements of PAHs are labor intensive and costly, spatial PAH exposure models are useful for epidemiological studies. However, few studies provide adequate spatial coverage to reflect intra-urban variability of ambient PAHs. In this study, we collected 39-40 weekly gas-phase PAH samples in southern California twice in summer and twice in winter, 2009, in order to characterize PAH source contributions and develop spatial models that can estimate gas-phase PAH concentrations at a high resolution. A spatial mixed regression model was constructed, including such variables as roadway, traffic, land-use, vegetation index, commercial cooking facilities, meteorology, and population density. Cross validation of the model resulted in an R 2 of 0.66 for summer and 0.77 for winter. Results showed higher total PAH concentrations in winter. Pyrogenic sources, such as fossil fuels and diesel exhaust, were the most dominant contributors to total PAHs. PAH sources varied by season, with a higher fossil fuel and wood burning contribution in winter. Spatial autocorrelation accounted for a substantial amount of the variance in total PAH concentrations for both winter (56%) and summer (19%). In summer, other key variables explaining the variance included meteorological factors (9%), population density (15%), and roadway length (21%). In winter, the variance was also explained by traffic density (16%). In this study, source characterization confirmed the dominance of traffic and other fossil fuel sources to total measured gas-phase PAH concentrations while a spatial exposure model identified key predictors of PAH concentrations. Gas-phase PAH source characterization and exposure estimation is of high utility to epidemiologist and policy makers interested in understanding the health impacts of gas-phase PAHs and strategies to reduce emissions.

Far field and wavefront characterization of a high-power semiconductor laser for free space optical communications

NASA Technical Reports Server (NTRS)

Cornwell, Donald M., Jr.; Saif, Babak N.

1991-01-01

The spatial pointing angle and far field beamwidth of a high-power semiconductor laser are characterized as a function of CW power and also as a function of temperature. The time-averaged spatial pointing angle and spatial lobe width were measured under intensity-modulated conditions. The measured pointing deviations are determined to be well within the pointing requirements of the NASA Laser Communications Transceiver (LCT) program. A computer-controlled Mach-Zehnder phase-shifter interferometer is used to characterize the wavefront quality of the laser. The rms phase error over the entire pupil was measured as a function of CW output power. Time-averaged measurements of the wavefront quality are also made under intensity-modulated conditions. The measured rms phase errors are determined to be well within the wavefront quality requirements of the LCT program.

Is high-resolution inverse characterization of heterogeneous river bed hydraulic conductivities needed and possible?

NASA Astrophysics Data System (ADS)

Kurtz, W.; Hendricks Franssen, H.-J.; Brunner, P.; Vereecken, H.

2013-10-01

River-aquifer exchange fluxes influence local and regional water balances and affect groundwater and river water quality and quantity. Unfortunately, river-aquifer exchange fluxes tend to be strongly spatially variable, and it is an open research question to which degree river bed heterogeneity has to be represented in a model in order to achieve reliable estimates of river-aquifer exchange fluxes. This research question is addressed in this paper with the help of synthetic simulation experiments, which mimic the Limmat aquifer in Zurich (Switzerland), where river-aquifer exchange fluxes and groundwater management activities play an important role. The solution of the unsaturated-saturated subsurface hydrological flow problem including river-aquifer interaction is calculated for ten different synthetic realities where the strongly heterogeneous river bed hydraulic conductivities (L) are perfectly known. Hydraulic head data (100 in the default scenario) are sampled from the synthetic realities. In subsequent data assimilation experiments, where L is unknown now, the hydraulic head data are used as conditioning information, with the help of the ensemble Kalman filter (EnKF). For each of the ten synthetic realities, four different ensembles of L are tested in the experiments with EnKF; one ensemble estimates high-resolution L fields with different L values for each element, and the other three ensembles estimate effective L values for 5, 3 or 2 zones. The calibration of higher-resolution L fields (i.e. fully heterogeneous or 5 zones) gives better results than the calibration of L for only 3 or 2 zones in terms of reproduction of states, stream-aquifer exchange fluxes and parameters. Effective L for a limited number of zones cannot always reproduce the true states and fluxes well and results in biased estimates of net exchange fluxes between aquifer and stream. Also in case only 10 head data are used for conditioning, the high-resolution characterization of L fields with EnKF is still feasible. For less heterogeneous river bed hydraulic conductivities, a high-resolution characterization of L is less important. When uncertainties in the hydraulic parameters of the aquifer are also regarded in the assimilation, the errors in state and flux predictions increase, but the ensemble with a high spatial resolution for L still outperforms the ensembles with effective L values. We conclude that for strongly heterogeneous river beds the commonly applied simplified representation of the streambed, with spatially homogeneous parameters or constant parameters for a few zones, might yield significant biases in the characterization of the water balance. For strongly heterogeneous river beds, we suggest adopting a stochastic field approach to model the spatially heterogeneous river beds geostatistically. The paper illustrates that EnKF is able to calibrate such heterogeneous streambeds on the basis of hydraulic head measurements, outperforming zonation approaches.

Influence of the tilt angle of Percutaneous Aortic Prosthesis on Velocity and Shear Stress Fields

PubMed Central

Gomes, Bruno Alvares de Azevedo; Camargo, Gabriel Cordeiro; dos Santos, Jorge Roberto Lopes; Azevedo, Luis Fernando Alzuguir; Nieckele, Ângela Ourivio; Siqueira-Filho, Aristarco Gonçalves; de Oliveira, Glaucia Maria Moraes

2017-01-01

Background Due to the nature of the percutaneous prosthesis deployment process, a variation in its final position is expected. Prosthetic valve placement will define the spatial location of its effective orifice in relation to the aortic annulus. The blood flow pattern in the ascending aorta is related to the aortic remodeling process, and depends on the spatial location of the effective orifice. The hemodynamic effect of small variations in the angle of inclination of the effective orifice has not been studied in detail. Objective To implement an in vitro simulation to characterize the hydrodynamic blood flow pattern associated with small variations in the effective orifice inclination. Methods A three-dimensional aortic phantom was constructed, reproducing the anatomy of one patient submitted to percutaneous aortic valve implantation. Flow analysis was performed by use of the Particle Image Velocimetry technique. The flow pattern in the ascending aorta was characterized for six flow rate levels. In addition, six angles of inclination of the effective orifice were assessed. Results The effective orifice at the -4º and -2º angles directed the main flow towards the anterior wall of the aortic model, inducing asymmetric and high shear stress in that region. However, the effective orifice at the +3º and +5º angles mimics the physiological pattern, centralizing the main flow and promoting a symmetric distribution of shear stress. Conclusion The measurements performed suggest that small changes in the angle of inclination of the percutaneous prosthesis aid in the generation of a physiological hemodynamic pattern, and can contribute to reduce aortic remodeling. PMID:28793046

Parallelization of a spatial random field characterization process using the Method of Anchored Distributions and the HTCondor high throughput computing system

NASA Astrophysics Data System (ADS)

Osorio-Murillo, C. A.; Over, M. W.; Frystacky, H.; Ames, D. P.; Rubin, Y.

2013-12-01

A new software application called MAD# has been coupled with the HTCondor high throughput computing system to aid scientists and educators with the characterization of spatial random fields and enable understanding the spatial distribution of parameters used in hydrogeologic and related modeling. MAD# is an open source desktop software application used to characterize spatial random fields using direct and indirect information through Bayesian inverse modeling technique called the Method of Anchored Distributions (MAD). MAD relates indirect information with a target spatial random field via a forward simulation model. MAD# executes inverse process running the forward model multiple times to transfer information from indirect information to the target variable. MAD# uses two parallelization profiles according to computational resources available: one computer with multiple cores and multiple computers - multiple cores through HTCondor. HTCondor is a system that manages a cluster of desktop computers for submits serial or parallel jobs using scheduling policies, resources monitoring, job queuing mechanism. This poster will show how MAD# reduces the time execution of the characterization of random fields using these two parallel approaches in different case studies. A test of the approach was conducted using 1D problem with 400 cells to characterize saturated conductivity, residual water content, and shape parameters of the Mualem-van Genuchten model in four materials via the HYDRUS model. The number of simulations evaluated in the inversion was 10 million. Using the one computer approach (eight cores) were evaluated 100,000 simulations in 12 hours (10 million - 1200 hours approximately). In the evaluation on HTCondor, 32 desktop computers (132 cores) were used, with a processing time of 60 hours non-continuous in five days. HTCondor reduced the processing time for uncertainty characterization by a factor of 20 (1200 hours reduced to 60 hours.)

Spatial Distribution of Dorylaimid and Mononchid Nematodes from the Southeast Iberian Peninsula: Environmental Characterization of Chorotypes

PubMed Central

Liébanas, G.; Guerrero, P.; Martín-García, J.-M.; Peña-Santiago, R.

2004-01-01

The aim of this study was to determine the incidence of 18 environmental variables in the spatial distribution of 30 chorotypes (species groups with significantly similar distribution patterns) of dorylaimid and mononchid nematodes by means of logistic regression in a natural area in the southeastern Iberian Peninsula. Six variables (elevation, color chroma, clay content, nitrogen content, CaCO₃, and plant community associated) were the most important environmental factors that helped explain the distribution of chorotypes. The distribution of most chorotypes was characterized by some (one to three) environmental variables; only two chorotypes were characterized by five or more variables, and four have not been characterized. PMID:19262795

Covert spatial attention is functionally intact in amblyopic human adults.

PubMed

Roberts, Mariel; Cymerman, Rachel; Smith, R Theodore; Kiorpes, Lynne; Carrasco, Marisa

2016-12-01

Certain abnormalities in behavioral performance and neural signaling have been attributed to a deficit of visual attention in amblyopia, a neurodevelopmental disorder characterized by a diverse array of visual deficits following abnormal binocular childhood experience. Critically, most have inferred attention's role in their task without explicitly manipulating and measuring its effects against a baseline condition. Here, we directly investigate whether human amblyopic adults benefit from covert spatial attention-the selective processing of visual information in the absence of eye movements-to the same degree as neurotypical observers. We manipulated both involuntary (Experiment 1) and voluntary (Experiment 2) attention during an orientation discrimination task for which the effects of covert spatial attention have been well established in neurotypical and special populations. In both experiments, attention significantly improved accuracy and decreased reaction times to a similar extent (a) between the eyes of the amblyopic adults and (b) between the amblyopes and their age- and gender-matched controls. Moreover, deployment of voluntary attention away from the target location significantly impaired task performance (Experiment 2). The magnitudes of the involuntary and voluntary attention benefits did not correlate with amblyopic depth or severity. Both groups of observers showed canonical performance fields (better performance along the horizontal than vertical meridian and at the lower than upper vertical meridian) and similar effects of attention across locations. Despite their characteristic low-level vision impairments, covert spatial attention remains functionally intact in human amblyopic adults.

Chemical Characterization of Tribological and Biomaterial Surfaces With Nanoscale Spatial Resolution

DTIC Science & Technology

2011-02-28

interpretation of meaningful results. It was known that the presence of third bodies or transfer layers is an influential component in determining...203 (2008) 750-755. 9. Scharf T.W. Singer I.L. Role of third bodies in friction behavior of diamond-like nanocomposite coatings studied by in situ...1    AFOSR Final Performance Report Project Title: Chemical characterization of tribological and biomaterial surfaces with nanoscale spatial

Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

DOE PAGES

Griffiths, Natalie A.; Hanson, Paul J.; Ricciuto, Daniel M.; ...

2017-11-22

Here, we are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO 2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial vs. temporal variation in measured C cycle processes and their environmental drivers. We also conducted a sensitivity analysis of a peatland C model to identify how variation in ecosystem parameters contributes to model prediction uncertainty. High spatial variability in C cycle processes resulted in the inability to determinemore » if the bog was a C source or sink, as the 95% confidence interval ranged from a source of 50 g C m –2 yr –1 to a sink of 67 g C m –2 yr –1. Model sensitivity analysis also identified that spatial variation in tree and shrub photosynthesis, allocation characteristics, and maintenance respiration all contributed to large variations in the pretreatment estimates of net C balance. Variation in ecosystem processes can be more thoroughly characterized if more measurements are collected for parameters that are highly variable over space and time, and especially if those measurements encompass environmental gradients that may be driving the spatial and temporal variation (e.g., hummock vs. hollow microtopographies, and wet vs. dry years). Together, the coupled modeling and empirical approaches indicate that variability in C cycle processes and their drivers must be taken into account when interpreting the significance of experimental warming and elevated CO 2 treatments.« less

Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Griffiths, Natalie A.; Hanson, Paul J.; Ricciuto, Daniel M.

Here, we are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO 2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial vs. temporal variation in measured C cycle processes and their environmental drivers. We also conducted a sensitivity analysis of a peatland C model to identify how variation in ecosystem parameters contributes to model prediction uncertainty. High spatial variability in C cycle processes resulted in the inability to determinemore » if the bog was a C source or sink, as the 95% confidence interval ranged from a source of 50 g C m –2 yr –1 to a sink of 67 g C m –2 yr –1. Model sensitivity analysis also identified that spatial variation in tree and shrub photosynthesis, allocation characteristics, and maintenance respiration all contributed to large variations in the pretreatment estimates of net C balance. Variation in ecosystem processes can be more thoroughly characterized if more measurements are collected for parameters that are highly variable over space and time, and especially if those measurements encompass environmental gradients that may be driving the spatial and temporal variation (e.g., hummock vs. hollow microtopographies, and wet vs. dry years). Together, the coupled modeling and empirical approaches indicate that variability in C cycle processes and their drivers must be taken into account when interpreting the significance of experimental warming and elevated CO 2 treatments.« less

Effect of spatial variability on solute velocity and dispersion in two soils of the Argentinian Pampas

NASA Astrophysics Data System (ADS)

Aparicio, Virginia; Costa, José; Domenech, Marisa; Castro Franco, Mauricio

2013-04-01

Predicting how solutes move through the unsaturated zone is essential to determine the potential risk of groundwater contamination (Costa et al., 1994). The estimation of the spatial variability of solute transport parameters, such as velocity and dispersion, enables a more accurate understanding of transport processes. Apparent electrical conductivity (ECa) has been used to characterize the spatial behavior of soil properties. The objective of this study was to characterize the spatial variability of soil transport parameters at field scale using ECa measurements. ECa measurements of 42 ha (Tres Arroyos) and 50 ha (Balcarce) farms were collected for the top 0-30 cm (ECa(s)) soil using the Veris® 3100. ECa maps were generated using geostatistical interpolation techniques. From these maps, three general areas were delineated, named high, medium, and low ECa zones. At each zone, three sub samples were collected. Soil samples were taken at 0-30 cm. Clay content and organic matter (OM) was analyzed. The transport assay was performed in the laboratory using undisturbed soil columns, under controlled conditions of T ° (22 ° C).Br- determinations were performed with a specific Br- electrode. The breakthrough curves were fitted using the model CXTFIT 2.1 (Toride et al., 1999) to estimate the transport parameters Velocity (V) and Dispersion (D). In this study we found no statistical significant differences for V and D between treatments. Also, there were no differences in V and D between sites. The average V and D value was 9.3 cm h-1 and 357.5 cm2 h-2, respectively. Despite finding statistically significant differences between treatments for the other measured physical and chemical properties, in our work it was not possible to detect the spatial variability of solute transport parameters.

Image quality phantom and parameters for high spatial resolution small-animal SPECT

NASA Astrophysics Data System (ADS)

Visser, Eric P.; Harteveld, Anita A.; Meeuwis, Antoi P. W.; Disselhorst, Jonathan A.; Beekman, Freek J.; Oyen, Wim J. G.; Boerman, Otto C.

2011-10-01

At present, generally accepted standards to characterize small-animal single photon emission tomographs (SPECT) do not exist. Whereas for small-animal positron emission tomography (PET), the NEMA NU 4-2008 guidelines are available, such standards are still lacking for small-animal SPECT. More specifically, a dedicated image quality (IQ) phantom and corresponding IQ parameters are absent. The structures of the existing PET IQ phantom are too large to fully characterize the sub-millimeter spatial resolution of modern multi-pinhole SPECT scanners, and its diameter will not fit into all scanners when operating in high spatial resolution mode. We therefore designed and constructed an adapted IQ phantom with smaller internal structures and external diameter, and a facility to guarantee complete filling of the smallest rods. The associated IQ parameters were adapted from NEMA NU 4. An additional parameter, effective whole-body sensitivity, was defined since this was considered relevant in view of the variable size of the field of view and the use of multiple bed positions as encountered in modern small-animal SPECT scanners. The usefulness of the phantom was demonstrated for 99mTc in a USPECT-II scanner operated in whole-body scanning mode using a multi-pinhole mouse collimator with 0.6 mm pinhole diameter.

The effects of environmental variability and spatial sampling on the three-dimensional inversion problem.

PubMed

Bender, Christopher M; Ballard, Megan S; Wilson, Preston S

2014-06-01

The overall goal of this work is to quantify the effects of environmental variability and spatial sampling on the accuracy and uncertainty of estimates of the three-dimensional ocean sound-speed field. In this work, ocean sound speed estimates are obtained with acoustic data measured by a sparse autonomous observing system using a perturbative inversion scheme [Rajan, Lynch, and Frisk, J. Acoust. Soc. Am. 82, 998-1017 (1987)]. The vertical and horizontal resolution of the solution depends on the bandwidth of acoustic data and on the quantity of sources and receivers, respectively. Thus, for a simple, range-independent ocean sound speed profile, a single source-receiver pair is sufficient to estimate the water-column sound-speed field. On the other hand, an environment with significant variability may not be fully characterized by a large number of sources and receivers, resulting in uncertainty in the solution. This work explores the interrelated effects of environmental variability and spatial sampling on the accuracy and uncertainty of the inversion solution though a set of case studies. Synthetic data representative of the ocean variability on the New Jersey shelf are used.

Improving the surface metrology accuracy of optical profilers by using multiple measurements

NASA Astrophysics Data System (ADS)

Xu, Xudong; Huang, Qiushi; Shen, Zhengxiang; Wang, Zhanshan

2016-10-01

The performance of high-resolution optical systems is affected by small angle scattering at the mid-spatial-frequency irregularities of the optical surface. Characterizing these irregularities is, therefore, important. However, surface measurements obtained with optical profilers are influenced by additive white noise, as indicated by the heavy-tail effect observable on their power spectral density (PSD). A multiple-measurement method is used to reduce the effects of white noise by averaging individual measurements. The intensity of white noise is determined using a model based on the theoretical PSD of fractal surface measurements with additive white noise. The intensity of white noise decreases as the number of times of multiple measurements increases. Using multiple measurements also increases the highest observed spatial frequency; this increase is derived and calculated. Additionally, the accuracy obtained using multiple measurements is carefully studied, with the analysis of both the residual reference error after calibration, and the random errors appearing in the range of measured spatial frequencies. The resulting insights on the effects of white noise in optical profiler measurements and the methods to mitigate them may prove invaluable to improve the quality of surface metrology with optical profilers.

Topographical maps as complex networks

NASA Astrophysics Data System (ADS)

da Fontoura Costa, Luciano; Diambra, Luis

2005-02-01

The neuronal networks in the mammalian cortex are characterized by the coexistence of hierarchy, modularity, short and long range interactions, spatial correlations, and topographical connections. Particularly interesting, the latter type of organization implies special demands on developing systems in order to achieve precise maps preserving spatial adjacencies, even at the expense of isometry. Although the object of intensive biological research, the elucidation of the main anatomic-functional purposes of the ubiquitous topographical connections in the mammalian brain remains an elusive issue. The present work reports on how recent results from complex network formalism can be used to quantify and model the effect of topographical connections between neuronal cells over the connectivity of the network. While the topographical mapping between two cortical modules is achieved by connecting nearest cells from each module, four kinds of network models are adopted for implementing intramodular connections, including random, preferential-attachment, short-range, and long-range networks. It is shown that, though spatially uniform and simple, topographical connections between modules can lead to major changes in the network properties in some specific cases, depending on intramodular connections schemes, fostering more effective intercommunication between the involved neuronal cells and modules. The possible implications of such effects on cortical operation are discussed.

Potential and flux field landscape theory. I. Global stability and dynamics of spatially dependent non-equilibrium systems.

PubMed

Wu, Wei; Wang, Jin

2013-09-28

We established a potential and flux field landscape theory to quantify the global stability and dynamics of general spatially dependent non-equilibrium deterministic and stochastic systems. We extended our potential and flux landscape theory for spatially independent non-equilibrium stochastic systems described by Fokker-Planck equations to spatially dependent stochastic systems governed by general functional Fokker-Planck equations as well as functional Kramers-Moyal equations derived from master equations. Our general theory is applied to reaction-diffusion systems. For equilibrium spatially dependent systems with detailed balance, the potential field landscape alone, defined in terms of the steady state probability distribution functional, determines the global stability and dynamics of the system. The global stability of the system is closely related to the topography of the potential field landscape in terms of the basins of attraction and barrier heights in the field configuration state space. The effective driving force of the system is generated by the functional gradient of the potential field alone. For non-equilibrium spatially dependent systems, the curl probability flux field is indispensable in breaking detailed balance and creating non-equilibrium condition for the system. A complete characterization of the non-equilibrium dynamics of the spatially dependent system requires both the potential field and the curl probability flux field. While the non-equilibrium potential field landscape attracts the system down along the functional gradient similar to an electron moving in an electric field, the non-equilibrium flux field drives the system in a curly way similar to an electron moving in a magnetic field. In the small fluctuation limit, the intrinsic potential field as the small fluctuation limit of the potential field for spatially dependent non-equilibrium systems, which is closely related to the steady state probability distribution functional, is found to be a Lyapunov functional of the deterministic spatially dependent system. Therefore, the intrinsic potential landscape can characterize the global stability of the deterministic system. The relative entropy functional of the stochastic spatially dependent non-equilibrium system is found to be the Lyapunov functional of the stochastic dynamics of the system. Therefore, the relative entropy functional quantifies the global stability of the stochastic system with finite fluctuations. Our theory offers an alternative general approach to other field-theoretic techniques, to study the global stability and dynamics of spatially dependent non-equilibrium field systems. It can be applied to many physical, chemical, and biological spatially dependent non-equilibrium systems.

Lateral Temperature-Gradient Method for High-Throughput Characterization of Material Processing by Millisecond Laser Annealing.

PubMed

Bell, Robert T; Jacobs, Alan G; Sorg, Victoria C; Jung, Byungki; Hill, Megan O; Treml, Benjamin E; Thompson, Michael O

2016-09-12

A high-throughput method for characterizing the temperature dependence of material properties following microsecond to millisecond thermal annealing, exploiting the temperature gradients created by a lateral gradient laser spike anneal (lgLSA), is presented. Laser scans generate spatial thermal gradients of up to 5 °C/μm with peak temperatures ranging from ambient to in excess of 1400 °C, limited only by laser power and materials thermal limits. Discrete spatial property measurements across the temperature gradient are then equivalent to independent measurements after varying temperature anneals. Accurate temperature calibrations, essential to quantitative analysis, are critical and methods for both peak temperature and spatial/temporal temperature profile characterization are presented. These include absolute temperature calibrations based on melting and thermal decomposition, and time-resolved profiles measured using platinum thermistors. A variety of spatially resolved measurement probes, ranging from point-like continuous profiling to large area sampling, are discussed. Examples from annealing of III-V semiconductors, CdSe quantum dots, low-κ dielectrics, and block copolymers are included to demonstrate the flexibility, high throughput, and precision of this technique.

A framework for discrete stochastic simulation on 3D moving boundary domains

DOE PAGES

Drawert, Brian; Hellander, Stefan; Trogdon, Michael; ...

2016-11-14

We have developed a method for modeling spatial stochastic biochemical reactions in complex, three-dimensional, and time-dependent domains using the reaction-diffusion master equation formalism. In particular, we look to address the fully coupled problems that arise in systems biology where the shape and mechanical properties of a cell are determined by the state of the biochemistry and vice versa. To validate our method and characterize the error involved, we compare our results for a carefully constructed test problem to those of a microscale implementation. Finally, we demonstrate the effectiveness of our method by simulating a model of polarization and shmoo formationmore » during the mating of yeast. The method is generally applicable to problems in systems biology where biochemistry and mechanics are coupled, and spatial stochastic effects are critical.« less

Effect of spatial bias on the nonequilibrium phase transition in a system of coagulating and fragmenting particles.

PubMed

Rajesh, R; Krishnamurthy, Supriya

2002-10-01

We examine the effect of spatial bias on a nonequilibrium system in which masses on a lattice evolve through the elementary moves of diffusion, coagulation, and fragmentation. When there is no preferred directionality in the motion of the masses, the model is known to exhibit a nonequilibrium phase transition between two different types of steady state, in all dimensions. We show analytically that introducing a preferred direction in the motion of the masses inhibits the occurrence of the phase transition in one dimension, in the thermodynamic limit. A finite-size system, however, continues to show a signature of the original transition, and we characterize the finite-size scaling implications of this. Our analysis is supported by numerical simulations. In two dimensions, bias is shown to be irrelevant.

How mutation affects evolutionary games on graphs

PubMed Central

Allen, Benjamin; Traulsen, Arne; Tarnita, Corina E.; Nowak, Martin A.

2011-01-01

Evolutionary dynamics are affected by population structure, mutation rates and update rules. Spatial or network structure facilitates the clustering of strategies, which represents a mechanism for the evolution of cooperation. Mutation dilutes this effect. Here we analyze how mutation influences evolutionary clustering on graphs. We introduce new mathematical methods to evolutionary game theory, specifically the analysis of coalescing random walks via generating functions. These techniques allow us to derive exact identity-by-descent (IBD) probabilities, which characterize spatial assortment on lattices and Cayley trees. From these IBD probabilities we obtain exact conditions for the evolution of cooperation and other game strategies, showing the dual effects of graph topology and mutation rate. High mutation rates diminish the clustering of cooperators, hindering their evolutionary success. Our model can represent either genetic evolution with mutation, or social imitation processes with random strategy exploration. PMID:21473871

Temporal dissociation between the focal and orientation components of spatial attention in central and peripheral vision.

PubMed

Albonico, Andrea; Malaspina, Manuela; Bricolo, Emanuela; Martelli, Marialuisa; Daini, Roberta

2016-11-01

Selective attention, i.e. the ability to concentrate one's limited processing resources on one aspect of the environment, is a multifaceted concept that includes different processes like spatial attention and its subcomponents of orienting and focusing. Several studies, indeed, have shown that visual tasks performance is positively influenced not only by attracting attention to the target location (orientation component), but also by the adjustment of the size of the attentional window according to task demands (focal component). Nevertheless, the relative weight of the two components in central and peripheral vision has never been studied. We conducted two experiments to explore whether different components of spatial attention have different effects in central and peripheral vision. In order to do so, participants underwent either a detection (Experiment 1) or a discrimination (Experiment 2) task where different types of cues elicited different components of spatial attention: a red dot, a small square and a big square (an optimal stimulus for the orientation component, an optimal and a sub-optimal stimulus for the focal component respectively). Response times and cue-size effects indicated a stronger effect of the small square or of the dot in different conditions, suggesting the existence of a dissociation in terms of mechanisms between the focal and the orientation components of spatial attention. Specifically, we found that the orientation component was stronger in periphery, while the focal component was noticeable only in central vision and characterized by an exogenous nature. Copyright © 2016 Elsevier B.V. All rights reserved.

Water surface elevation from the upcoming SWOT mission under different flows conditions

NASA Astrophysics Data System (ADS)

Domeneghetti, Alessio; Schumann, Guy J. P.; Wei, Rui; Frasson, Renato P. M.; Durand, Michael; Pavelsky, Tamlin; Castellarin, Attilio; Brath, Armando

2017-04-01

The upcoming SWOT (Surface Water and Ocean Topography) satellite mission will provide unprecedented bi-dimensional observations of terrestrial water surface heights along rivers wider than 100m. Despite the literature reports several activities showing possible uses of SWOT products, potential and limitations of satellite observations still remain poorly understood and investigated. We present one of the first analyses regarding the spatial observation of water surface elevation expected from SWOT for a 140 km reach of the middle-lower portion of the Po River, in Northern Italy. The river stretch is characterized by a main channel varying from 100-500 m in width and a floodplain delimited by a system of major embankments that can be as wide as 5 km. The reconstruction of the hydraulic behavior of the Po River is performed by means of a quasi-2D model built with detailed topographic and bathymetric information (LiDAR, 2m resolution), while the simulation of remotely sensed hydrometric data is performed with a SWOT simulator that mimics the satellite sensor characteristics. Referring to water surface elevations associated with different flow conditions (maximum, minimum and average flow) this work characterizes the spatial observations provided by SWOT and highlights the strengths and limitations of the expected products. The analysis provides a robust reference for spatial water observations that will be available from SWOT and assesses possible effects of river embankments, river width and river topography under different hydraulic conditions. Results of the study characterize the expected accuracy of the upcoming SWOT mission and provide additional insights towards the appropriate exploitation of future hydrological observations.

Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks

PubMed Central

Colon-Perez, Luis M.; Spindler, Caitlin; Goicochea, Shelby; Triplett, William; Parekh, Mansi; Montie, Eric; Carney, Paul R.; Price, Catherine; Mareci, Thomas H.

2015-01-01

High spatial and angular resolution diffusion weighted imaging (DWI) with network analysis provides a unique framework for the study of brain structure in vivo. DWI-derived brain connectivity patterns are best characterized with graph theory using an edge weight to quantify the strength of white matter connections between gray matter nodes. Here a dimensionless, scale-invariant edge weight is introduced to measure node connectivity. This edge weight metric provides reasonable and consistent values over any size scale (e.g. rodents to humans) used to quantify the strength of connection. Firstly, simulations were used to assess the effects of tractography seed point density and random errors in the estimated fiber orientations; with sufficient signal-to-noise ratio (SNR), edge weight estimates improve as the seed density increases. Secondly to evaluate the application of the edge weight in the human brain, ten repeated measures of DWI in the same healthy human subject were analyzed. Mean edge weight values within the cingulum and corpus callosum were consistent and showed low variability. Thirdly, using excised rat brains to study the effects of spatial resolution, the weight of edges connecting major structures in the temporal lobe were used to characterize connectivity in this local network. The results indicate that with adequate resolution and SNR, connections between network nodes are characterized well by this edge weight metric. Therefore this new dimensionless, scale-invariant edge weight metric provides a robust measure of network connectivity that can be applied in any size regime. PMID:26173147

Dimensionless, Scale Invariant, Edge Weight Metric for the Study of Complex Structural Networks.

PubMed

Colon-Perez, Luis M; Spindler, Caitlin; Goicochea, Shelby; Triplett, William; Parekh, Mansi; Montie, Eric; Carney, Paul R; Price, Catherine; Mareci, Thomas H

2015-01-01

High spatial and angular resolution diffusion weighted imaging (DWI) with network analysis provides a unique framework for the study of brain structure in vivo. DWI-derived brain connectivity patterns are best characterized with graph theory using an edge weight to quantify the strength of white matter connections between gray matter nodes. Here a dimensionless, scale-invariant edge weight is introduced to measure node connectivity. This edge weight metric provides reasonable and consistent values over any size scale (e.g. rodents to humans) used to quantify the strength of connection. Firstly, simulations were used to assess the effects of tractography seed point density and random errors in the estimated fiber orientations; with sufficient signal-to-noise ratio (SNR), edge weight estimates improve as the seed density increases. Secondly to evaluate the application of the edge weight in the human brain, ten repeated measures of DWI in the same healthy human subject were analyzed. Mean edge weight values within the cingulum and corpus callosum were consistent and showed low variability. Thirdly, using excised rat brains to study the effects of spatial resolution, the weight of edges connecting major structures in the temporal lobe were used to characterize connectivity in this local network. The results indicate that with adequate resolution and SNR, connections between network nodes are characterized well by this edge weight metric. Therefore this new dimensionless, scale-invariant edge weight metric provides a robust measure of network connectivity that can be applied in any size regime.

Electroluminescence analysis for spatial characterization of parasitic optical losses in silicon heterojunction solar cells

NASA Astrophysics Data System (ADS)

Ahmed, Nuha; Zhang, Lei; Sriramagiri, Gowri; Das, Ujjwal; Hegedus, Steven

2018-04-01

Electroluminescence (EL) coupled with reflection measurements are used to spatially quantify optical losses in silicon heterojunction solar cells due to plasmonic absorption in the metal back contacts. The effect of indium tin oxide back reflector in decreasing this plasmonic absorption is found to increase the reflection from the back nickel (Ni)-aluminum (Al) and Al metals by ˜12% and ˜41%, respectively, in both bifacial and front junction silicon solar cells. Losses due to back reflection are calculated by comparison between the EL emission signals in high and low back reflection samples and are shown to be in agreement with standard reflection measurements. We conclude that the optical properties of the back contact can significantly influence the EL intensity which complicates the interpretation of EL as being primarily due to recombination especially when comparing two different devices with spatially varying back surface structures.

Crosstalk and transitions between multiple spatial maps in an attractor neural network model of the hippocampus: Collective motion of the activity

NASA Astrophysics Data System (ADS)

Monasson, R.; Rosay, S.

2014-03-01

The dynamics of a neural model for hippocampal place cells storing spatial maps is studied. In the absence of external input, depending on the number of cells and on the values of control parameters (number of environments stored, level of neural noise, average level of activity, connectivity of place cells), a "clump" of spatially localized activity can diffuse or remains pinned due to crosstalk between the environments. In the single-environment case, the macroscopic coefficient of diffusion of the clump and its effective mobility are calculated analytically from first principles and corroborated by numerical simulations. In the multienvironment case the heights and the widths of the pinning barriers are analytically characterized with the replica method; diffusion within one map is then in competition with transitions between different maps. Possible mechanisms enhancing mobility are proposed and tested.

A Comparison of Local Variance, Fractal Dimension, and Moran's I as Aids to Multispectral Image Classification

NASA Technical Reports Server (NTRS)

Emerson, Charles W.; Sig-NganLam, Nina; Quattrochi, Dale A.

2004-01-01

The accuracy of traditional multispectral maximum-likelihood image classification is limited by the skewed statistical distributions of reflectances from the complex heterogenous mixture of land cover types in urban areas. This work examines the utility of local variance, fractal dimension and Moran's I index of spatial autocorrelation in segmenting multispectral satellite imagery. Tools available in the Image Characterization and Modeling System (ICAMS) were used to analyze Landsat 7 imagery of Atlanta, Georgia. Although segmentation of panchromatic images is possible using indicators of spatial complexity, different land covers often yield similar values of these indices. Better results are obtained when a surface of local fractal dimension or spatial autocorrelation is combined as an additional layer in a supervised maximum-likelihood multispectral classification. The addition of fractal dimension measures is particularly effective at resolving land cover classes within urbanized areas, as compared to per-pixel spectral classification techniques.

Cognitive and emotional alterations in periadolescent mice exposed to 2 g hypergravity field.

PubMed

Francia, Nadia; Santucci, Daniela; Chiarotti, Flavia; Alleva, Enrico

2004-12-15

The development of the nervous system is a dynamic process where epigenetic factors play a fundamental role. Both ground-based and space research indicate that exposure to an altered gravitational environment affects rodent neurobehavioral profile and stage of development as well as duration of exposure appear to be critical for the observed effects. The behavioral profile of adolescent (28-day-old) male and female CD-1 mice upon acute 2 g exposure was characterized and emotional/anxiety responses (plus-maze), as well as spatial learning performance (Morris water-maze), were assessed respectively 24 and 48 h after hypergravity exposure. Behavioral observation indicated a transient mild sickness associated with hypergravity, with a decrease in spontaneous activity. Rotation per se induced an increase in emotional/anxious responses and a deterioration of spatial learning acquisition, while hypergravity specifically improved flexibility of spatial orientation.

Source/sink patterns of disturbance and cross-scale mismatches in a panarchy of social-ecological landscapes

Treesearch

Nicola1 Zaccarelli; Petrosillo; Irene; Giovanni Zurlini; KurtHans Riitters

2008-01-01

Land-use change is one of the major factors affecting global environmental change and represents a primary human effect on natural systems. Taking into account the scales and patterns of human land uses as source/sink disturbance systems, we describe a framework to characterize and interpret the spatial patterns of disturbances along a continuum of scales in a panarchy...

Interaction dynamics of multiple autonomous mobile robots in bounded spatial domains

NASA Technical Reports Server (NTRS)

Wang, P. K. C.

1989-01-01

A general navigation strategy for multiple autonomous robots in a bounded domain is developed analytically. Each robot is modeled as a spherical particle (i.e., an effective spatial domain about the center of mass); its interactions with other robots or with obstacles and domain boundaries are described in terms of the classical many-body problem; and a collision-avoidance strategy is derived and combined with homing, robot-robot, and robot-obstacle collision-avoidance strategies. Results from homing simulations involving (1) a single robot in a circular domain, (2) two robots in a circular domain, and (3) one robot in a domain with an obstacle are presented in graphs and briefly characterized.

Spatial navigation in young versus older adults

PubMed Central

Gazova, Ivana; Laczó, Jan; Rubinova, Eva; Mokrisova, Ivana; Hyncicova, Eva; Andel, Ross; Vyhnalek, Martin; Sheardova, Katerina; Coulson, Elizabeth J.; Hort, Jakub

2013-01-01

Older age is associated with changes in the brain, including the medial temporal lobe, which may result in mild spatial navigation deficits, especially in allocentric navigation. The aim of the study was to characterize the profile of real-space allocentric (world-centered, hippocampus-dependent) and egocentric (body-centered, parietal lobe dependent) navigation and learning in young vs. older adults, and to assess a possible influence of gender. We recruited healthy participants without cognitive deficits on standard neuropsychological testing, white matter lesions or pronounced hippocampal atrophy: 24 young participants (18–26 years old) and 44 older participants stratified as participants 60–70 years old (n = 24) and participants 71–84 years old (n = 20). All underwent spatial navigation testing in the real-space human analog of the Morris Water Maze, which has the advantage of assessing separately allocentric and egocentric navigation and learning. Of the eight consecutive trials, trials 2–8 were used to reduce bias by a rebound effect (more dramatic changes in performance between trials 1 and 2 relative to subsequent trials). The participants who were 71–84 years old (p < 0.001), but not those 60–70 years old, showed deficits in allocentric navigation compared to the young participants. There were no differences in egocentric navigation. All three groups showed spatial learning effect (p’ s ≤ 0.01). There were no gender differences in spatial navigation and learning. Linear regression limited to older participants showed linear (β = 0.30, p = 0.045) and quadratic (β = 0.30, p = 0.046) effect of age on allocentric navigation. There was no effect of age on egocentric navigation. These results demonstrate that navigation deficits in older age may be limited to allocentric navigation, whereas egocentric navigation and learning may remain preserved. This specific pattern of spatial navigation impairment may help differentiate normal aging from prodromal Alzheimer’s disease. PMID:24391585

Evaluating the effect of remote sensing image spatial resolution on soil exchangeable potassium prediction models in smallholder farm settings.

PubMed

Xu, Yiming; Smith, Scot E; Grunwald, Sabine; Abd-Elrahman, Amr; Wani, Suhas P

2017-09-15

Major end users of Digital Soil Mapping (DSM) such as policy makers and agricultural extension workers are faced with choosing the appropriate remote sensing data. The objective of this research is to analyze the spatial resolution effects of different remote sensing images on soil prediction models in two smallholder farms in Southern India called Kothapally (Telangana State), and Masuti (Karnataka State), and provide empirical guidelines to choose the appropriate remote sensing images in DSM. Bayesian kriging (BK) was utilized to characterize the spatial pattern of exchangeable potassium (K ex ) in the topsoil (0-15 cm) at different spatial resolutions by incorporating spectral indices from Landsat 8 (30 m), RapidEye (5 m), and WorldView-2/GeoEye-1/Pleiades-1A images (2 m). Some spectral indices such as band reflectances, band ratios, Crust Index and Atmospherically Resistant Vegetation Index from multiple images showed relatively strong correlations with soil K ex in two study areas. The research also suggested that fine spatial resolution WorldView-2/GeoEye-1/Pleiades-1A-based and RapidEye-based soil prediction models would not necessarily have higher prediction performance than coarse spatial resolution Landsat 8-based soil prediction models. The end users of DSM in smallholder farm settings need select the appropriate spectral indices and consider different factors such as the spatial resolution, band width, spectral resolution, temporal frequency, cost, and processing time of different remote sensing images. Overall, remote sensing-based Digital Soil Mapping has potential to be promoted to smallholder farm settings all over the world and help smallholder farmers implement sustainable and field-specific soil nutrient management scheme. Copyright © 2017 Elsevier Ltd. All rights reserved.

Measuring attention using the Posner cuing paradigm: the role of across and within trial target probabilities

PubMed Central

Hayward, Dana A.; Ristic, Jelena

2013-01-01

Numerous studies conducted within the recent decades have utilized the Posner cuing paradigm for eliciting, measuring, and theoretically characterizing attentional orienting. However, the data from recent studies suggest that the Posner cuing task might not provide an unambiguous measure of attention, as reflexive spatial orienting has been found to interact with extraneous processes engaged by the task's typical structure, i.e., the probability of target presence across trials, which affects tonic alertness, and the probability of target presence within trials, which affects voluntary temporal preparation. To understand the contribution of each of these two processes to the measurement of attentional orienting we assessed their individual and combined effects on reflexive attention elicited by a spatially nonpredictive peripheral cue. Our results revealed that the magnitude of spatial orienting was modulated by joint changes in the global probability of target presence across trials and the local probability of target presence within trials, while the time course of spatial orienting was susceptible to changes in the probability of target presence across trials. These data thus raise important questions about the choice of task parameters within the Posner cuing paradigm and their role in both the measurement and theoretical attributions of the observed attentional effects. PMID:23730280

Methods for spectral image analysis by exploiting spatial simplicity

DOEpatents

Keenan, Michael R.

2010-05-25

Several full-spectrum imaging techniques have been introduced in recent years that promise to provide rapid and comprehensive chemical characterization of complex samples. One of the remaining obstacles to adopting these techniques for routine use is the difficulty of reducing the vast quantities of raw spectral data to meaningful chemical information. Multivariate factor analysis techniques, such as Principal Component Analysis and Alternating Least Squares-based Multivariate Curve Resolution, have proven effective for extracting the essential chemical information from high dimensional spectral image data sets into a limited number of components that describe the spectral characteristics and spatial distributions of the chemical species comprising the sample. There are many cases, however, in which those constraints are not effective and where alternative approaches may provide new analytical insights. For many cases of practical importance, imaged samples are "simple" in the sense that they consist of relatively discrete chemical phases. That is, at any given location, only one or a few of the chemical species comprising the entire sample have non-zero concentrations. The methods of spectral image analysis of the present invention exploit this simplicity in the spatial domain to make the resulting factor models more realistic. Therefore, more physically accurate and interpretable spectral and abundance components can be extracted from spectral images that have spatially simple structure.

Methods for spectral image analysis by exploiting spatial simplicity

DOEpatents

Keenan, Michael R.

2010-11-23

Several full-spectrum imaging techniques have been introduced in recent years that promise to provide rapid and comprehensive chemical characterization of complex samples. One of the remaining obstacles to adopting these techniques for routine use is the difficulty of reducing the vast quantities of raw spectral data to meaningful chemical information. Multivariate factor analysis techniques, such as Principal Component Analysis and Alternating Least Squares-based Multivariate Curve Resolution, have proven effective for extracting the essential chemical information from high dimensional spectral image data sets into a limited number of components that describe the spectral characteristics and spatial distributions of the chemical species comprising the sample. There are many cases, however, in which those constraints are not effective and where alternative approaches may provide new analytical insights. For many cases of practical importance, imaged samples are "simple" in the sense that they consist of relatively discrete chemical phases. That is, at any given location, only one or a few of the chemical species comprising the entire sample have non-zero concentrations. The methods of spectral image analysis of the present invention exploit this simplicity in the spatial domain to make the resulting factor models more realistic. Therefore, more physically accurate and interpretable spectral and abundance components can be extracted from spectral images that have spatially simple structure.

Characterizing forest fragments in boreal, temperate, and tropical ecosystems

Treesearch

Arjan J. H. Meddens; Andrew T. Hudak; Jeffrey S. Evans; William A. Gould; Grizelle Gonzalez

2008-01-01

An increased ability to analyze landscapes in a spatial manner through the use of remote sensing leads to improved capabilities for quantifying human-induced forest fragmentation. Developments of spatially explicit methods in landscape analyses are emerging. In this paper, the image delineation software program eCognition and the spatial pattern analysis program...

Spatial patterns of throughfall isotopic composition at the event and seasonal timescales

Treesearch

Scott T. Allen; Richard F. Keim; Jeffrey J. McDonnell

2015-01-01

Spatial variability of throughfall isotopic composition in forests is indicative of complex processes occurring in the canopy and remains insufficiently understood to properly characterize precipitation inputs to the catchment water balance. Here we investigate variability of throughfall isotopic composition with the objectives: (1) to quantify the spatial variability...

Guidance of Spatial Attention by Incidental Learning and Endogenous Cuing

ERIC Educational Resources Information Center

Jiang, Yuhong V.; Swallow, Khena M.; Rosenbaum, Gail M.

2013-01-01

Our visual system is highly sensitive to regularities in the environment. Locations that were important in one's previous experience are often prioritized during search, even though observers may not be aware of the learning. In this study we characterized the guidance of spatial attention by incidental learning of a target's spatial probability,…

Characterizing Spatial Organization of Cell Surface Receptors in Human Breast Cancer with STORM

NASA Astrophysics Data System (ADS)

Lyall, Evan; Chapman, Matthew R.; Sohn, Lydia L.

2012-02-01

Regulation and control of complex biological functions are dependent upon spatial organization of biological structures at many different length scales. For instance Eph receptors and their ephrin ligands bind when opposing cells come into contact during development, resulting in spatial organizational changes on the nanometer scale that lead to changes on the macro scale, in a process known as organ morphogenesis. One technique able to probe this important spatial organization at both the nanometer and micrometer length scales, including at cell-cell junctions, is stochastic optical reconstruction microscopy (STORM). STORM is a technique that localizes individual fluorophores based on the centroids of their point spread functions and then reconstructs a composite image to produce super resolved structure. We have applied STORM to study spatial organization of the cell surface of human breast cancer cells, specifically the organization of tyrosine kinase receptors and chemokine receptors. A better characterization of spatial organization of breast cancer cell surface proteins is necessary to fully understand the tumorigenisis pathways in the most common malignancy in United States women.

Geography literation to improve spatial intelligence of high school student

NASA Astrophysics Data System (ADS)

Utami, WS; Zain, IM

2018-01-01

Spatial intelligence is deeply related to success in the STEM disciplines (science,technology, engineering, and math). spatial intelligence as a transversal capacity which is useful for everyday life but which cannot be characterized in any specific and distinctive way, as are, for example, linguistic or mathematical ability. The ability of geographical literacy relates to spatial intelligence. test results prove that the ability of high-liter geography of high school students found in students who have a good spatial intelligence score

What Do They Have in Common? Physical Drivers of Streamflow Spatial Correlation and Prediction of Flow Regimes at Ungauged Locations in the Contiguous United States

NASA Astrophysics Data System (ADS)

Betterle, A.; Schirmer, M.; Botter, G.

2017-12-01

Streamflow dynamics strongly influence anthropogenic activities and the ecological functions of riverine and riparian habitats. However, the widespread lack of direct discharge measurements often challenges the set-up of conscious and effective decision-making processes, including droughts and floods protection, water resources management and river restoration practices. By characterizing the spatial correlation of daily streamflow timeseries at two arbitrary locations, this study provides a method to evaluate how spatially variable catchment-scale hydrological process affects the resulting streamflow dynamics along and across river systems. In particular, streamflow spatial correlation is described analytically as a function of morphological, climatic and vegetation properties in the contributing catchments, building on a joint probabilistic description of flow dynamics at pairs of outlets. The approach enables an explicit linkage between similarities of flow dynamics and spatial patterns of hydrologically relevant features of climate and landscape. Therefore, the method is suited to explore spatial patterns of streamflow dynamics across geomorphoclimatic gradients. In particular, we show how the streamflow correlation can be used at the continental scale to individuate catchment pairs with similar hydrological dynamics, thereby providing a useful tool for the estimate of flow duration curves in poorly gauged areas.

Improvement in the accuracy of back trajectories using WRF to identify pollen sources in southern Iberian Peninsula.

PubMed

Hernández-Ceballos, M A; Skjøth, C A; García-Mozo, H; Bolívar, J P; Galán, C

2014-12-01

Airborne pollen transport at micro-, meso-gamma and meso-beta scales must be studied by atmospheric models, having special relevance in complex terrain. In these cases, the accuracy of these models is mainly determined by the spatial resolution of the underlying meteorological dataset. This work examines how meteorological datasets determine the results obtained from atmospheric transport models used to describe pollen transport in the atmosphere. We investigate the effect of the spatial resolution when computing backward trajectories with the HYSPLIT model. We have used meteorological datasets from the WRF model with 27, 9 and 3 km resolutions and from the GDAS files with 1° resolution. This work allows characterizing atmospheric transport of Olea pollen in a region with complex flows. The results show that the complex terrain affects the trajectories and this effect varies with the different meteorological datasets. Overall, the change from GDAS to WRF-ARW inputs improves the analyses with the HYSPLIT model, thereby increasing the understanding the pollen episode. The results indicate that a spatial resolution of at least 9 km is needed to simulate atmospheric flows that are considerable affected by the relief of the landscape. The results suggest that the appropriate meteorological files should be considered when atmospheric models are used to characterize the atmospheric transport of pollen on micro-, meso-gamma and meso-beta scales. Furthermore, at these scales, the results are believed to be generally applicable for related areas such as the description of atmospheric transport of radionuclides or in the definition of nuclear-radioactivity emergency preparedness.

Plant Host Species and Geographic Distance Affect the Structure of Aboveground Fungal Symbiont Communities, and Environmental Filtering Affects Belowground Communities in a Coastal Dune Ecosystem.

PubMed

David, Aaron S; Seabloom, Eric W; May, Georgiana

2016-05-01

Microbial symbionts inhabit tissues of all plants and animals. Their community composition depends largely on two ecological processes: (1) filtering by abiotic conditions and host species determining the environments that symbionts are able to colonize and (2) dispersal-limitation determining the pool of symbionts available to colonize a given host and community spatial structure. In plants, the above- and belowground tissues represent such distinct habitats for symbionts that we expect different effects of filtering and spatial structuring on their symbiont communities. In this study, we characterized above- and belowground communities of fungal endophytes--fungi living asymptomatically within plants--to understand the contributions of filtering and spatial structure to endophyte community composition. We used a culture-based approach to characterize endophytes growing in leaves and roots of three species of coastal beachgrasses in dunes of the USA Pacific Northwest. For leaves, endophyte isolation frequency and OTU richness depended primarily on plant host species. In comparison, for roots, both isolation frequency and OTU richness increased from the nutrient-poor front of the dune to the higher-nutrient backdune. Endophyte community composition in leaves exhibited a distance-decay relationship across the region. In a laboratory assay, faster growth rates and lower spore production were more often associated with leaf- than root-inhabiting endophytes. Overall, our results reveal a greater importance of biotic filtering by host species and dispersal-limitation over regional geographic distances for aboveground leaf endophyte communities and stronger effects of abiotic environmental filtering and locally patchy distributions for belowground root endophyte communities.

Improvement in the accuracy of back trajectories using WRF to identify pollen sources in southern Iberian Peninsula

NASA Astrophysics Data System (ADS)

Hernández-Ceballos, M. A.; Skjøth, C. A.; García-Mozo, H.; Bolívar, J. P.; Galán, C.

2014-12-01

Airborne pollen transport at micro-, meso-gamma and meso-beta scales must be studied by atmospheric models, having special relevance in complex terrain. In these cases, the accuracy of these models is mainly determined by the spatial resolution of the underlying meteorological dataset. This work examines how meteorological datasets determine the results obtained from atmospheric transport models used to describe pollen transport in the atmosphere. We investigate the effect of the spatial resolution when computing backward trajectories with the HYSPLIT model. We have used meteorological datasets from the WRF model with 27, 9 and 3 km resolutions and from the GDAS files with 1 ° resolution. This work allows characterizing atmospheric transport of Olea pollen in a region with complex flows. The results show that the complex terrain affects the trajectories and this effect varies with the different meteorological datasets. Overall, the change from GDAS to WRF-ARW inputs improves the analyses with the HYSPLIT model, thereby increasing the understanding the pollen episode. The results indicate that a spatial resolution of at least 9 km is needed to simulate atmospheric flows that are considerable affected by the relief of the landscape. The results suggest that the appropriate meteorological files should be considered when atmospheric models are used to characterize the atmospheric transport of pollen on micro-, meso-gamma and meso-beta scales. Furthermore, at these scales, the results are believed to be generally applicable for related areas such as the description of atmospheric transport of radionuclides or in the definition of nuclear-radioactivity emergency preparedness.

Multicontrast reconstruction using compressed sensing with low rank and spatially varying edge-preserving constraints for high-resolution MR characterization of myocardial infarction.

PubMed

Zhang, Li; Athavale, Prashant; Pop, Mihaela; Wright, Graham A

2017-08-01

To enable robust reconstruction for highly accelerated three-dimensional multicontrast late enhancement imaging to provide improved MR characterization of myocardial infarction with isotropic high spatial resolution. A new method using compressed sensing with low rank and spatially varying edge-preserving constraints (CS-LASER) is proposed to improve the reconstruction of fine image details from highly undersampled data. CS-LASER leverages the low rank feature of the multicontrast volume series in MR relaxation and integrates spatially varying edge preservation into the explicit low rank constrained compressed sensing framework using weighted total variation. With an orthogonal temporal basis pre-estimated, a multiscale iterative reconstruction framework is proposed to enable the practice of CS-LASER with spatially varying weights of appropriate accuracy. In in vivo pig studies with both retrospective and prospective undersamplings, CS-LASER preserved fine image details better and presented tissue characteristics with a higher degree of consistency with histopathology, particularly in the peri-infarct region, than an alternative technique for different acceleration rates. An isotropic resolution of 1.5 mm was achieved in vivo within a single breath-hold using the proposed techniques. Accelerated three-dimensional multicontrast late enhancement with CS-LASER can achieve improved MR characterization of myocardial infarction with high spatial resolution. Magn Reson Med 78:598-610, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Environmental Assessment and Monitoring with ICAMS (Image Characterization and Modeling System) Using Multiscale Remote-Sensing Data

NASA Technical Reports Server (NTRS)

Lam, N.; Qiu, H.-I.; Quattrochi, Dale A.; Zhao, Wei

1997-01-01

With the rapid increase in spatial data, especially in the NASA-EOS (Earth Observing System) era, it is necessary to develop efficient and innovative tools to handle and analyze these data so that environmental conditions can be assessed and monitored. A main difficulty facing geographers and environmental scientists in environmental assessment and measurement is that spatial analytical tools are not easily accessible. We have recently developed a remote sensing/GIS software module called Image Characterization and Modeling System (ICAMS) to provide specialized spatial analytical tools for the measurement and characterization of satellite and other forms of spatial data. ICAMS runs on both the Intergraph-MGE and Arc/info UNIX and Windows-NT platforms. The main techniques in ICAMS include fractal measurement methods, variogram analysis, spatial autocorrelation statistics, textural measures, aggregation techniques, normalized difference vegetation index (NDVI), and delineation of land/water and vegetated/non-vegetated boundaries. In this paper, we demonstrate the main applications of ICAMS on the Intergraph-MGE platform using Landsat Thematic Mapper images from the city of Lake Charles, Louisiana. While the utilities of ICAMS' spatial measurement methods (e.g., fractal indices) in assessing environmental conditions remain to be researched, making the software available to a wider scientific community can permit the techniques in ICAMS to be evaluated and used for a diversity of applications. The findings from these various studies should lead to improved algorithms and more reliable models for environmental assessment and monitoring.

Effects of Heterogeniety on Spatial Pattern Analysis of Wild Pistachio Trees in Zagros Woodlands, Iran

NASA Astrophysics Data System (ADS)

Erfanifard, Y.; Rezayan, F.

2014-10-01

Vegetation heterogeneity biases second-order summary statistics, e.g., Ripley's K-function, applied for spatial pattern analysis in ecology. Second-order investigation based on Ripley's K-function and related statistics (i.e., L- and pair correlation function g) is widely used in ecology to develop hypothesis on underlying processes by characterizing spatial patterns of vegetation. The aim of this study was to demonstrate effects of underlying heterogeneity of wild pistachio (Pistacia atlantica Desf.) trees on the second-order summary statistics of point pattern analysis in a part of Zagros woodlands, Iran. The spatial distribution of 431 wild pistachio trees was accurately mapped in a 40 ha stand in the Wild Pistachio & Almond Research Site, Fars province, Iran. Three commonly used second-order summary statistics (i.e., K-, L-, and g-functions) were applied to analyse their spatial pattern. The two-sample Kolmogorov-Smirnov goodness-of-fit test showed that the observed pattern significantly followed an inhomogeneous Poisson process null model in the study region. The results also showed that heterogeneous pattern of wild pistachio trees biased the homogeneous form of K-, L-, and g-functions, demonstrating a stronger aggregation of the trees at the scales of 0-50 m than actually existed and an aggregation at scales of 150-200 m, while regularly distributed. Consequently, we showed that heterogeneity of point patterns may bias the results of homogeneous second-order summary statistics and we also suggested applying inhomogeneous summary statistics with related null models for spatial pattern analysis of heterogeneous vegetations.

Analytical ultrasonics for evaluation of composite materials response. Part 2: Generation and detection

NASA Technical Reports Server (NTRS)

Duke, J. C., Jr.; Henneke, E. G., II

1986-01-01

To evaluate the response of composite materials, it is imperative that the input excitation as well as the observed output be well characterized. This characterization ideally should be in terms of displacements as a function of time with high spatial resolution. Additionally, the ability to prescribe these features for the excitation is highly desirable. Various methods for generating and detecting ultrasound in advanced composite materials are examined. Characterization and tailoring of input excitation is considered for contact and noncontact, mechanical, and electromechanical devices. Type of response as well as temporal and spatial resolution of detection methods are discussed as well. Results of investigations at Virginia Tech in application of these techniques to characterizing the response of advanced composites are presented.

Fast Time-Varying Volume Rendering Using Time-Space Partition (TSP) Tree

NASA Technical Reports Server (NTRS)

Shen, Han-Wei; Chiang, Ling-Jen; Ma, Kwan-Liu

1999-01-01

We present a new, algorithm for rapid rendering of time-varying volumes. A new hierarchical data structure that is capable of capturing both the temporal and the spatial coherence is proposed. Conventional hierarchical data structures such as octrees are effective in characterizing the homogeneity of the field values existing in the spatial domain. However, when treating time merely as another dimension for a time-varying field, difficulties frequently arise due to the discrepancy between the field's spatial and temporal resolutions. In addition, treating spatial and temporal dimensions equally often prevents the possibility of detecting the coherence that is unique in the temporal domain. Using the proposed data structure, our algorithm can meet the following goals. First, both spatial and temporal coherence are identified and exploited for accelerating the rendering process. Second, our algorithm allows the user to supply the desired error tolerances at run time for the purpose of image-quality/rendering-speed trade-off. Third, the amount of data that are required to be loaded into main memory is reduced, and thus the I/O overhead is minimized. This low I/O overhead makes our algorithm suitable for out-of-core applications.

Application of an imputation method for geospatial inventory of forest structural attributes across multiple spatial scales in the Lake States, U.S.A

NASA Astrophysics Data System (ADS)

Deo, Ram K.

Credible spatial information characterizing the structure and site quality of forests is critical to sustainable forest management and planning, especially given the increasing demands and threats to forest products and services. Forest managers and planners are required to evaluate forest conditions over a broad range of scales, contingent on operational or reporting requirements. Traditionally, forest inventory estimates are generated via a design-based approach that involves generalizing sample plot measurements to characterize an unknown population across a larger area of interest. However, field plot measurements are costly and as a consequence spatial coverage is limited. Remote sensing technologies have shown remarkable success in augmenting limited sample plot data to generate stand- and landscape-level spatial predictions of forest inventory attributes. Further enhancement of forest inventory approaches that couple field measurements with cutting edge remotely sensed and geospatial datasets are essential to sustainable forest management. We evaluated a novel Random Forest based k Nearest Neighbors (RF-kNN) imputation approach to couple remote sensing and geospatial data with field inventory collected by different sampling methods to generate forest inventory information across large spatial extents. The forest inventory data collected by the FIA program of US Forest Service was integrated with optical remote sensing and other geospatial datasets to produce biomass distribution maps for a part of the Lake States and species-specific site index maps for the entire Lake State. Targeting small-area application of the state-of-art remote sensing, LiDAR (light detection and ranging) data was integrated with the field data collected by an inexpensive method, called variable plot sampling, in the Ford Forest of Michigan Tech to derive standing volume map in a cost-effective way. The outputs of the RF-kNN imputation were compared with independent validation datasets and extant map products based on different sampling and modeling strategies. The RF-kNN modeling approach was found to be very effective, especially for large-area estimation, and produced results statistically equivalent to the field observations or the estimates derived from secondary data sources. The models are useful to resource managers for operational and strategic purposes.

Evolution and enabling capabilities of spatially resolved techniques for the characterization of heterogeneously catalyzed reactions

DOE PAGES

Morgan, Kevin; Touitou, Jamal; Choi, Jae -Soon; ...

2016-01-15

The development and optimization of catalysts and catalytic processes requires knowledge of reaction kinetics and mechanisms. In traditional catalyst kinetic characterization, the gas composition is known at the inlet, and the exit flow is measured to determine changes in concentration. As such, the progression of the chemistry within the catalyst is not known. Technological advances in electromagnetic and physical probes have made visualizing the evolution of the chemistry within catalyst samples a reality, as part of a methodology commonly known as spatial resolution. Herein, we discuss and evaluate the development of spatially resolved techniques, including the evolutions and achievements ofmore » this growing area of catalytic research. The impact of such techniques is discussed in terms of the invasiveness of physical probes on catalytic systems, as well as how experimentally obtained spatial profiles can be used in conjunction with kinetic modeling. Moreover, some aims and aspirations for further evolution of spatially resolved techniques are considered.« less

Implicit and Explicit Number-Space Associations Differentially Relate to Interference Control in Young Adults With ADHD

PubMed Central

Georges, Carrie; Hoffmann, Danielle; Schiltz, Christine

2018-01-01

Behavioral evidence for the link between numerical and spatial representations comes from the spatial-numerical association of response codes (SNARC) effect, consisting in faster reaction times to small/large numbers with the left/right hand respectively. The SNARC effect is, however, characterized by considerable intra- and inter-individual variability. It depends not only on the explicit or implicit nature of the numerical task, but also relates to interference control. To determine whether the prevalence of the latter relation in the elderly could be ascribed to younger individuals’ ceiling performances on executive control tasks, we determined whether the SNARC effect related to Stroop and/or Flanker effects in 26 young adults with ADHD. We observed a divergent pattern of correlation depending on the type of numerical task used to assess the SNARC effect and the type of interference control measure involved in number-space associations. Namely, stronger number-space associations during parity judgments involving implicit magnitude processing related to weaker interference control in the Stroop but not Flanker task. Conversely, stronger number-space associations during explicit magnitude classifications tended to be associated with better interference control in the Flanker but not Stroop paradigm. The association of stronger parity and magnitude SNARC effects with weaker and better interference control respectively indicates that different mechanisms underlie these relations. Activation of the magnitude-associated spatial code is irrelevant and potentially interferes with parity judgments, but in contrast assists explicit magnitude classifications. Altogether, the present study confirms the contribution of interference control to number-space associations also in young adults. It suggests that magnitude-associated spatial codes in implicit and explicit tasks are monitored by different interference control mechanisms, thereby explaining task-related intra-individual differences in number-space associations. PMID:29881363

Mapping and spatial-temporal modeling of Bromus tectorum invasion in central Utah

NASA Astrophysics Data System (ADS)

Jin, Zhenyu

Cheatgrass, or Downy Brome, is an exotic winter annual weed native to the Mediterranean region. Since its introduction to the U.S., it has become a significant weed and aggressive invader of sagebrush, pinion-juniper, and other shrub communities, where it can completely out-compete native grasses and shrubs. In this research, remotely sensed data combined with field collected data are used to investigate the distribution of the cheatgrass in Central Utah, to characterize the trend of the NDVI time-series of cheatgrass, and to construct a spatially explicit population-based model to simulate the spatial-temporal dynamics of the cheatgrass. This research proposes a method for mapping the canopy closure of invasive species using remotely sensed data acquired at different dates. Different invasive species have their own distinguished phenologies and the satellite images in different dates could be used to capture the phenology. The results of cheatgrass abundance prediction have a good fit with the field data for both linear regression and regression tree models, although the regression tree model has better performance than the linear regression model. To characterize the trend of NDVI time-series of cheatgrass, a novel smoothing algorithm named RMMEH is presented in this research to overcome some drawbacks of many other algorithms. By comparing the performance of RMMEH in smoothing a 16-day composite of the MODIS NDVI time-series with that of two other methods, which are the 4253EH, twice and the MVI, we have found that RMMEH not only keeps the original valid NDVI points, but also effectively removes the spurious spikes. The reconstructed NDVI time-series of different land covers are of higher quality and have smoother temporal trend. To simulate the spatial-temporal dynamics of cheatgrass, a spatially explicit population-based model is built applying remotely sensed data. The comparison between the model output and the ground truth of cheatgrass closure demonstrates that the model could successfully simulate the spatial-temporal dynamics of cheatgrass in a simple cheatgrass-dominant environment. The simulation of the functional response of different prescribed fire rates also shows that this model is helpful to answer management questions like, "What are the effects of prescribed fire to invasive species?" It demonstrates that a medium fire rate of 10% can successfully prevent cheatgrass invasion.

A hierarchical approach to forest landscape pattern characterization.

PubMed

Wang, Jialing; Yang, Xiaojun

2012-01-01

Landscape spatial patterns have increasingly been considered to be essential for environmental planning and resources management. In this study, we proposed a hierarchical approach for landscape classification and evaluation by characterizing landscape spatial patterns across different hierarchical levels. The case study site is the Red Hills region of northern Florida and southwestern Georgia, well known for its biodiversity, historic resources, and scenic beauty. We used one Landsat Enhanced Thematic Mapper image to extract land-use/-cover information. Then, we employed principal-component analysis to help identify key class-level landscape metrics for forests at different hierarchical levels, namely, open pine, upland pine, and forest as a whole. We found that the key class-level landscape metrics varied across different hierarchical levels. Compared with forest as a whole, open pine forest is much more fragmented. The landscape metric, such as CONTIG_MN, which measures whether pine patches are contiguous or not, is more important to characterize the spatial pattern of pine forest than to forest as a whole. This suggests that different metric sets should be used to characterize landscape patterns at different hierarchical levels. We further used these key metrics, along with the total class area, to classify and evaluate subwatersheds through cluster analysis. This study demonstrates a promising approach that can be used to integrate spatial patterns and processes for hierarchical forest landscape planning and management.

Determination of Flaw Size and Depth From Temporal Evolution of Thermal Response

NASA Technical Reports Server (NTRS)

Winfree, William P.; Zalameda, Joseph N.; Cramer, Elliott; Howell, Patricia A.

2015-01-01

Simple methods for reducing the pulsed thermographic responses of flaws have tended to be based on either the spatial or temporal response. This independent assessment limits the accuracy of characterization. A variational approach is presented for reducing the thermographic data to produce an estimated size for a flaw that incorporates both the temporal and spatial response to improve the characterization. The size and depth are determined from both the temporal and spatial thermal response of the exterior surface above a flaw and constraints on the length of the contour surrounding the delamination. Examples of the application of the technique to simulation and experimental data acquired are presented to investigate the limitations of the technique.

Interaction of spatially separated oscillating solitons in biased two-photon photorefractive materials

NASA Astrophysics Data System (ADS)

Asif, Noushin; Biswas, Anjan; Jovanoski, Z.; Konar, S.

2015-01-01

This paper presents the dynamics of two spatially separated optical solitons in two-photon photorefractive materials. The variational formalism has been employed to derive evolution equations of different parameters which characterize the dynamics of two interacting solitons. This approach yields a system of coupled ordinary differential equations for evolution of different parameters characterizing solitons such as amplitude, spatial width, chirp, center of gravity, etc., which have been subsequently solved adopting numerical method to extract information on their dynamics. Depending on their initial separation and power, solitons are shown to either disperse or compresses individually and attract each other. Dragging and trapping of a probe soliton by another pump have been discussed.

Cross-Modulated Amplitudes and Frequencies Characterize Interacting Components in Complex Systems

NASA Astrophysics Data System (ADS)

Gans, Fabian; Schumann, Aicko Y.; Kantelhardt, Jan W.; Penzel, Thomas; Fietze, Ingo

2009-03-01

The dynamics of complex systems is characterized by oscillatory components on many time scales. To study the interactions between these components we analyze the cross modulation of their instantaneous amplitudes and frequencies, separating synchronous and antisynchronous modulation. We apply our novel technique to brain-wave oscillations in the human electroencephalogram and show that interactions between the α wave and the δ or β wave oscillators as well as spatial interactions can be quantified and related with physiological conditions (e.g., sleep stages). Our approach overcomes the limitation to oscillations with similar frequencies and enables us to quantify directly nonlinear effects such as positive or negative frequency modulation.

The Characterization of Laser Ablation Patterns and a New Definition of Resolution in Matrix Assisted Laser Desorption Ionization Imaging Mass Spectrometry (MALDI-IMS).

PubMed

O'Rourke, Matthew B; Raymond, Benjamin B A; Padula, Matthew P

2017-05-01

Matrix assisted laser desorption ionization imaging mass spectrometry (MALDI-IMS) is a technique that has seen a sharp rise in both use and development. Despite this rapid adoption, there have been few thorough investigations into the actual physical mechanisms that underlie the acquisition of IMS images. We therefore set out to characterize the effect of IMS laser ablation patterns on the surface of a sample. We also concluded that the governing factors that control spatial resolution have not been correctly defined and therefore propose a new definition of resolution. Graphical Abstract ᅟ.

Implications of different approaches for characterizing ambient air pollutant concentrations within the urban airshed for time-series studies and health benefits analyses.

PubMed

Strickland, Matthew J; Darrow, Lyndsey A; Mulholland, James A; Klein, Mitchel; Flanders, W Dana; Winquist, Andrea; Tolbert, Paige E

2011-05-11

In time-series studies of the health effects of urban air pollutants, decisions must be made about how to characterize pollutant levels within the airshed. Emergency department visits for pediatric asthma exacerbations were collected from Atlanta hospitals. Concentrations of carbon monoxide, nitrogen dioxide, ozone, sulfur dioxide, particulate matter less than 10 microns in diameter (PM10), particulate matter less than 2.5 microns in diameter (PM2.5), and the PM2.5 components elemental carbon, organic carbon, and sulfate were obtained from networks of ambient air quality monitors. For each pollutant we created three different daily metrics. For one metric we used the measurements from a centrally-located monitor; for the second we averaged measurements across the network of monitors; and for the third we estimated the population-weighted average concentration using an isotropic spatial model. Rate ratios for each of the metrics were estimated from time-series models. For pollutants with relatively homogeneous spatial distributions we observed only small differences in the rate ratio across the three metrics. Conversely, for spatially heterogeneous pollutants we observed larger differences in the rate ratios. For a given pollutant, the strength of evidence for an association (i.e., chi-square statistics) tended to be similar across metrics. Given that the chi-square statistics were similar across the metrics, the differences in the rate ratios for the spatially heterogeneous pollutants may seem like a relatively small issue. However, these differences are important for health benefits analyses, where results from epidemiological studies on the health effects of pollutants (per unit change in concentration) are used to predict the health impacts of a reduction in pollutant concentrations. We discuss the relative merits of the different metrics as they pertain to time-series studies and health benefits analyses.

Same task, different strategies: How brain networks can be influenced by memory strategy

PubMed Central

Sanfratello, Lori; Caprihan, Arvind; Stephen, Julia M.; Knoefel, Janice E.; Adair, John C.; Qualls, Clifford; Lundy, S. Laura; Aine, Cheryl J.

2015-01-01

Previous functional neuroimaging studies demonstrated that different neural networks underlie different types of cognitive processing by engaging participants in particular tasks, such as verbal or spatial working memory (WM) tasks. However, we report here that even when a working memory task is defined as verbal or spatial, different types of memory strategies may be employed to complete it, with concomitant variations in brain activity. We developed a questionnaire to characterize the type of strategy used by individual members in a group of 28 young healthy participants (18–25 years) during a spatial WM task. A cluster analysis was performed to differentiate groups. We acquired functional magnetoencephalography (MEG) and structural diffusion tensor imaging (DTI) measures to characterize the brain networks associated with the use of different strategies. We found two types of strategies were utilized during the spatial WM task, a visuospatial and a verbal strategy, and brain regions and timecourses of activation differed between participants who used each. Task performance also varied by type of strategy used, with verbal strategies showing an advantage. In addition, performance on neuropsychological tests (indices from WAIS-IV, REY-D Complex Figure) correlated significantly with fractional anisotropy (FA) measures for the visuospatial strategy group in white matter tracts implicated in other WM/attention studies. We conclude that differences in memory strategy can have a pronounced effect on the locations and timing of brain activation, and that these differences need further investigation as a possible confounding factor for studies using group averaging as a means for summarizing results. PMID:24931401

Same task, different strategies: how brain networks can be influenced by memory strategy.

PubMed

Sanfratello, Lori; Caprihan, Arvind; Stephen, Julia M; Knoefel, Janice E; Adair, John C; Qualls, Clifford; Lundy, S Laura; Aine, Cheryl J

2014-10-01

Previous functional neuroimaging studies demonstrated that different neural networks underlie different types of cognitive processing by engaging participants in particular tasks, such as verbal or spatial working memory (WM) tasks. However, we report here that even when a WM task is defined as verbal or spatial, different types of memory strategies may be used to complete it, with concomitant variations in brain activity. We developed a questionnaire to characterize the type of strategy used by individual members in a group of 28 young healthy participants (18-25 years) during a spatial WM task. A cluster analysis was performed to differentiate groups. We acquired functional magnetoencephalography and structural diffusion tensor imaging measures to characterize the brain networks associated with the use of different strategies. We found two types of strategies were used during the spatial WM task, a visuospatial and a verbal strategy, and brain regions and time courses of activation differed between participants who used each. Task performance also varied by type of strategy used with verbal strategies showing an advantage. In addition, performance on neuropsychological tests (indices from Wechsler Adult Intelligence Scale-IV, Rey Complex Figure Test) correlated significantly with fractional anisotropy measures for the visuospatial strategy group in white matter tracts implicated in other WM and attention studies. We conclude that differences in memory strategy can have a pronounced effect on the locations and timing of brain activation and that these differences need further investigation as a possible confounding factor for studies using group averaging as a means for summarizing results. Copyright © 2014 Wiley Periodicals, Inc.

Joint Multifractal Analysis of penetration resistance variability in an olive orchard.

NASA Astrophysics Data System (ADS)

Lopez-Herrera, Juan; Herrero-Tejedor, Tomas; Saa-Requejo, Antonio; Villeta, Maria; Tarquis, Ana M.

2016-04-01

Spatial variability of soil properties is relevant for identifying those zones with physical degradation. We used descriptive statistics and multifractal analysis for characterizing the spatial patterns of soil penetrometer resistance (PR) distributions and compare them at different soil depths and soil water content to investigate the tillage effect in soil compactation. The study was conducted on an Inceptisol dedicated to olive orchard for the last 70 years. Two parallel transects of 64 m were selected as different soil management plots, conventional tillage (CT) and no tillage (NT). Penetrometer resistance readings were carried out at 50 cm intervals within the first 20 cm of soil depth (López de Herrera et al., 2015a). Two way ANOVA highlighted that tillage system, soil depth and their interaction are statistically significant to explain the variance of PR data. The comparison of CT and NT results at different depths showed that there are significant differences deeper than 10 cm but not in the first two soil layers. The scaling properties of each PR profile was characterized by τ(q) function, calculated in the range of moment orders (q) between -5 and +5 taken at 0.5 lag increments. Several parameters were calculated from this to establish different comparisons (López de Herrera et al., 2015b). While the multifractal analysis characterizes the distribution of a single variable along its spatial support, the joint multifractal analysis can be used to characterize the joint distribution of two or more variables along a common spatial support (Kravchenko et al., 2000; Zeleke and Si, 2004). This type of analysis was performed to study the scaling properties of the joint distribution of PR at different depths. The results showed that this type of analysis added valuable information to describe the spatial arrangement of depth-dependent penetrometer data sets in all the soil layers. References Kravchenko AN, Bullock DG, Boast CW (2000) Joint multifractal analysis of crop yield and terrain slope. Agro. j. 92: 1279-1290. López de Herrera, J., Tomas Herrero Tejedor, Antonio Saa-Requejo and Ana M. Tarquis (2015a) Influence of tillage in soil penetration resistance variability in an olive orchard. Geophysical Research Abstracts, 17, EGU2015-15425. López de Herrera, J., Tomás Herrero Tejedor, Antonio Saa-Requejo, A.M. Tarquis. Influence of tillage in soil penetration resistance variability in an olive orchard. Soil Research, accepted, 2015b. doi: SR15046 Zeleke TB, Si BC (2004) Scaling properties of topographic indices and crop yield: Multifractal and joint multifractal approaches. Agro. j. 96: 1082-1090.

Soil organic matter dynamics and CO2 fluxes in relation to landscape scale processes: linking process understanding to regional scale carbon mass-balances

NASA Astrophysics Data System (ADS)

Van Oost, Kristof; Nadeu, Elisabet; Wiaux, François; Wang, Zhengang; Stevens, François; Vanclooster, Marnik; Tran, Anh; Bogaert, Patrick; Doetterl, Sebastian; Lambot, Sébastien; Van wesemael, Bas

2014-05-01

In this paper, we synthesize the main outcomes of a collaborative project (2009-2014) initiated at the UCL (Belgium). The main objective of the project was to increase our understanding of soil organic matter dynamics in complex landscapes and use this to improve predictions of regional scale soil carbon balances. In a first phase, the project characterized the emergent spatial variability in soil organic matter storage and key soil properties at the regional scale. Based on the integration of remote sensing, geomorphological and soil analysis techniques, we quantified the temporal and spatial variability of soil carbon stock and pool distribution at the local and regional scales. This work showed a linkage between lateral fluxes of C in relation with sediment transport and the spatial variation in carbon storage at multiple spatial scales. In a second phase, the project focused on characterizing key controlling factors and process interactions at the catena scale. In-situ experiments of soil CO2 respiration showed that the soil carbon response at the catena scale was spatially heterogeneous and was mainly controlled by the catenary variation of soil physical attributes (soil moisture, temperature, C quality). The hillslope scale characterization relied on advanced hydrogeophysical techniques such as GPR (Ground Penetrating Radar), EMI (Electromagnetic induction), ERT (Electrical Resistivity Tomography), and geophysical inversion and data mining tools. Finally, we report on the integration of these insights into a coupled and spatially explicit model and its application. Simulations showed that C stocks and redistribution of mass and energy fluxes are closely coupled, they induce structured spatial and temporal patterns with non negligible attached uncertainties. We discuss the main outcomes of these activities in relation to sink-source behavior and relevance of erosion processes for larger-scale C budgets.

Statistical characterization of spatial patterns of rainfall cells in extratropical cyclones

NASA Astrophysics Data System (ADS)

Bacchi, Baldassare; Ranzi, Roberto; Borga, Marco

1996-11-01

The assumption of a particular type of distribution of rainfall cells in space is needed for the formulation of several space-time rainfall models. In this study, weather radar-derived rain rate maps are employed to evaluate different types of spatial organization of rainfall cells in storms through the use of distance functions and second-moment measures. In particular the spatial point patterns of the local maxima of rainfall intensity are compared to a completely spatially random (CSR) point process by applying an objective distance measure. For all the analyzed radar maps the CSR assumption is rejected, indicating that at the resolution of the observation considered, rainfall cells are clustered. Therefore a theoretical framework for evaluating and fitting alternative models to the CSR is needed. This paper shows how the "reduced second-moment measure" of the point pattern can be employed to estimate the parameters of a Neyman-Scott model and to evaluate the degree of adequacy to the experimental data. Some limitations of this theoretical framework, and also its effectiveness, in comparison to the use of scaling functions, are discussed.

An analysis of spatial and socio-economic determinants of tuberculosis in Hermosillo, Mexico, 2000-2006.

PubMed

Alvarez-Hernández, G; Lara-Valencia, F; Reyes-Castro, P A; Rascón-Pacheco, R A

2010-06-01

The city of Hermosillo, in Northwest Mexico, has a higher incidence of tuberculosis (TB) than the national average. However, the intra-urban TB distribution, which could limit the effectiveness of preventive strategies and control, is unknown. Using geographic information systems (GIS) and spatial analysis, we characterized the geographical distribution of TB by basic geostatistical area (BGA), and compared it with a social deprivation index. Univariate and bivariate techniques were used to detect risk areas. Globally, TB in the city of Hermosillo is not spatially auto-correlated, but local clusters with high incidence and mortality rates were identified in the northwest, central-east and southwest sections of the city. BGAs with high social deprivation had an excess risk of TB. GIS and spatial analysis are useful tools to detect high TB risk areas in the city of Hermosillo. Such areas may be vulnerable due to low socio-economic status. The study of small geographical areas in urban settings similar to Hermosillo could indicate the best course of action to be taken for TB prevention and control.

Forest Fires and Post - Fire Regeneration in Algeria Analysis with Satellite Data

NASA Astrophysics Data System (ADS)

Zegrar, Ahmed

2016-07-01

The Algerian forests are characterized by a particularly flammable material and fuel. The wind, the relief and the slope facilitates the propagation of fire. The use of remote sensing data multi-­dates, combined with other types of data of various kinds on the environment and forest burned, opens up interesting perspectives for the management of post-­fire regeneration. In this study the use of multi-­temporal remote sensing image Alsat-­1 and Landsat combined with other types of data concerning both background and burned down forest appears to be promising in evaluating and spatial and temporal effects of post fire regeneration. A spatial analysis taking into consideration the characteristics of the burned down site in the North West of Algeria, allowed to better account new factors to explain the regeneration and its temporal and spatial variation. We intended to show the potential use of remote sensing data from satellite ALSAT-­1, of spatial resolution of 32 m. . This approach allows showing the contribution of the data of Algerian satellite ALSAT in the detection and the well attended some forest fires in Algeria.

Disentangling the Contribution of Spatial Reference Frames to Executive Functioning in Healthy and Pathological Aging: An Experimental Study with Virtual Reality.

PubMed

Serino, Silvia; Morganti, Francesca; Colombo, Desirée; Pedroli, Elisa; Cipresso, Pietro; Riva, Giuseppe

2018-06-01

A growing body of evidence pointed out that a decline in effectively using spatial reference frames for categorizing information occurs both in normal and pathological aging. Moreover, it is also known that executive deficits primarily characterize the cognitive profile of older individuals. Acknowledging this literature, the current study was aimed to specifically disentangle the contribution of the cognitive abilities related to the use of spatial reference frames to executive functioning in both healthy and pathological aging. 48 healthy elderly individuals and 52 elderly suffering from probable Alzheimer's Disease (AD) took part in the study. We exploited the potentiality of Virtual Reality to specifically measure the abilities in retrieving and syncing between different spatial reference frames, and then we administrated different neuropsychological tests for evaluating executive functions. Our results indicated that allocentric functions contributed significantly to the planning abilities, while syncing abilities influenced the attentional ones. The findings were discussed in terms of previous literature exploring relationships between cognitive deficits in the first phase of AD.

Acoustic emission characterization of microcracking in laboratory-scale hydraulic fracturing tests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hampton, Jesse; Gutierrez, Marte; Matzar, Luis

Understanding microcracking near coalesced fracture generation is critically important for hydrocarbon and geothermal reservoir characterization as well as damage evaluation in civil engineering structures. Dense and sometimes random microcracking near coalesced fracture formation alters the mechanical properties of the nearby virgin material. Individual microcrack characterization is also significant in quantifying the material changes near the fracture faces (i.e. damage). Acoustic emission (AE) monitoring and analysis provide unique information regarding the microcracking process temporally, and information concerning the source characterization of individual microcracks can be extracted. In this context, laboratory hydraulic fracture tests were carried out while monitoring the AEs frommore » several piezoelectric transducers. In-depth post-processing of the AE event data was performed for the purpose of understanding the individual source mechanisms. Several source characterization techniques including moment tensor inversion, event parametric analysis, and volumetric deformation analysis were adopted. Post-test fracture characterization through coring, slicing and micro-computed tomographic imaging was performed to determine the coalesced fracture location and structure. Distinct differences in fracture characteristics were found spatially in relation to the openhole injection interval. Individual microcrack AE analysis showed substantial energy reduction emanating spatially from the injection interval. Lastly, it was quantitatively observed that the recorded AE signals provided sufficient information to generalize the damage radiating spatially away from the injection wellbore.« less

Acoustic emission characterization of microcracking in laboratory-scale hydraulic fracturing tests

DOE PAGES

Hampton, Jesse; Gutierrez, Marte; Matzar, Luis; ...

2018-06-11

Understanding microcracking near coalesced fracture generation is critically important for hydrocarbon and geothermal reservoir characterization as well as damage evaluation in civil engineering structures. Dense and sometimes random microcracking near coalesced fracture formation alters the mechanical properties of the nearby virgin material. Individual microcrack characterization is also significant in quantifying the material changes near the fracture faces (i.e. damage). Acoustic emission (AE) monitoring and analysis provide unique information regarding the microcracking process temporally, and information concerning the source characterization of individual microcracks can be extracted. In this context, laboratory hydraulic fracture tests were carried out while monitoring the AEs frommore » several piezoelectric transducers. In-depth post-processing of the AE event data was performed for the purpose of understanding the individual source mechanisms. Several source characterization techniques including moment tensor inversion, event parametric analysis, and volumetric deformation analysis were adopted. Post-test fracture characterization through coring, slicing and micro-computed tomographic imaging was performed to determine the coalesced fracture location and structure. Distinct differences in fracture characteristics were found spatially in relation to the openhole injection interval. Individual microcrack AE analysis showed substantial energy reduction emanating spatially from the injection interval. Lastly, it was quantitatively observed that the recorded AE signals provided sufficient information to generalize the damage radiating spatially away from the injection wellbore.« less

Imaging spectroscopy of solar radio burst fine structures.

PubMed

Kontar, E P; Yu, S; Kuznetsov, A A; Emslie, A G; Alcock, B; Jeffrey, N L S; Melnik, V N; Bian, N H; Subramanian, P

2017-11-15

Solar radio observations provide a unique diagnostic of the outer solar atmosphere. However, the inhomogeneous turbulent corona strongly affects the propagation of the emitted radio waves, so decoupling the intrinsic properties of the emitting source from the effects of radio wave propagation has long been a major challenge in solar physics. Here we report quantitative spatial and frequency characterization of solar radio burst fine structures observed with the Low Frequency Array, an instrument with high-time resolution that also permits imaging at scales much shorter than those corresponding to radio wave propagation in the corona. The observations demonstrate that radio wave propagation effects, and not the properties of the intrinsic emission source, dominate the observed spatial characteristics of radio burst images. These results permit more accurate estimates of source brightness temperatures, and open opportunities for quantitative study of the mechanisms that create the turbulent coronal medium through which the emitted radiation propagates.

Monitoring eye movements to investigate the picture superiority effect in spatial memory.

PubMed

Cattaneo, Zaira; Rosen, Mitchell; Vecchi, Tomaso; Pelz, Jeff B

2008-01-01

Spatial memory is usually better for iconic than for verbal material. Our aim was to assess whether such effect is related to the way iconic and verbal targets are viewed when people have to memorize their locations. Eye movements were recorded while participants memorized the locations of images or words. Images received fewer, but longer, gazes than words. Longer gazes on images might reflect greater attention devoted to images due to their higher sensorial distinctiveness and/or generation with images of an additional phonological code beyond the visual code immediately available. We found that words were scanned mainly from left to right while a more heterogeneous scanning strategy characterized encoding of images. This suggests that iconic configurations tend to be maintained as global integrated representations in which all the item/location pairs are simultaneously present whilst verbal configurations are maintained through more sequential processes.

Cerebral White Matter Integrity and Cognitive Aging: Contributions from Diffusion Tensor Imaging

PubMed Central

Madden, David J.; Bennett, Ilana J.; Song, Allen W.

2009-01-01

The integrity of cerebral white matter is critical for efficient cognitive functioning, but little is known regarding the role of white matter integrity in age-related differences in cognition. Diffusion tensor imaging (DTI) measures the directional displacement of molecular water and as a result can characterize the properties of white matter that combine to restrict diffusivity in a spatially coherent manner. This review considers DTI studies of aging and their implications for understanding adult age differences in cognitive performance. Decline in white matter integrity contributes to a disconnection among distributed neural systems, with a consistent effect on perceptual speed and executive functioning. The relation between white matter integrity and cognition varies across brain regions, with some evidence suggesting that age-related effects exhibit an anterior-posterior gradient. With continued improvements in spatial resolution and integration with functional brain imaging, DTI holds considerable promise, both for theories of cognitive aging and for translational application. PMID:19705281

Effective field theory of broken spatial diffeomorphisms

DOE PAGES

Lin, Chunshan; Labun, Lance Z.

2016-03-17

We study the low energy effective theory describing gravity with broken spatial diffeomorphism invariance. In the unitary gauge, the Goldstone bosons associated with broken diffeomorphisms are eaten and the graviton becomes a massive spin-2 particle with 5 well-behaved degrees of freedom. In this gauge, the most general theory is built with the lowest dimension operators invariant under only temporal diffeomorphisms. Imposing the additional shift and SO(3) internal symmetries, we analyze the perturbations on a FRW background. At linear perturbation level, the observables of this theory are characterized by five parameters, including the usual cosmological parameters and one additional coupling constantmore » for the symmetry-breaking scalars. In the de Sitter and Minkowski limit, the three Goldstone bosons are supermassive and can be integrated out, leaving two massive tensor modes as the only propagating degrees of freedom. In conclusion, we discuss several examples relevant to theories of massive gravity.« less

Behavioral Characterization of a Mouse Model Overexpressing DSCR1/ RCAN1

PubMed Central

Dierssen, Mara; Arqué, Gloria; McDonald, Jerome; Andreu, Nuria; Martínez-Cué, Carmen; Flórez, Jesús; Fillat, Cristina

2011-01-01

DSCR1/ RCAN1 is a chromosome 21 gene found to be overexpressed in the brains of Down syndrome (DS) and postulated as a good candidate to contribute to mental disability. However, even though Rcan1 knockout mice have pronounced spatial learning and memory deficits, the possible deleterious effects of its overexpression in DS are not well understood. We have generated a transgenic mouse model overexpressing DSCR1/RCAN1 in the brain and analyzed the effect of RCAN1 overexpression on cognitive function. TgRCAN1 mice present a marked disruption of the learning process in a visuo-spatial learning task. However, no significant differences were observed in the performance of the memory phase of the test (removal session) nor in a step-down passive avoidance task, thus suggesting that once learning has been established, the animals are able to consolidate the information in the longer term. PMID:21364922

Chapter 6: Temperature

USGS Publications Warehouse

Jones, Leslie A.; Muhlfeld, Clint C.; Hauer, F. Richard; F. Richard Hauer,; Lamberti, G.A.

2017-01-01

Stream temperature has direct and indirect effects on stream ecology and is critical in determining both abiotic and biotic system responses across a hierarchy of spatial and temporal scales. Temperature variation is primarily driven by solar radiation, while landscape topography, geology, and stream reach scale ecosystem processes contribute to local variability. Spatiotemporal heterogeneity in freshwater ecosystems influences habitat distributions, physiological functions, and phenology of all aquatic organisms. In this chapter we provide an overview of methods for monitoring stream temperature, characterization of thermal profiles, and modeling approaches to stream temperature prediction. Recent advances in temperature monitoring allow for more comprehensive studies of the underlying processes influencing annual variation of temperatures and how thermal variability may impact aquatic organisms at individual, population, and community based scales. Likewise, the development of spatially explicit predictive models provide a framework for simulating natural and anthropogenic effects on thermal regimes which is integral for sustainable management of freshwater systems.

Combined effects of levels of protection and environmental variables at different spatial resolutions on fish assemblages in a marine protected area.

PubMed

Claudet, Joachim; García-Charton, José Antonio; Lenfant, Philippe

2011-02-01

The links between species-environment relations and species' responses to protection are unclear, but the objectives of marine protected areas (MPAs) are most likely to be achieved when those relations are known and inform MPA design. The components of a species' habitat vary with the spatial resolution of the area considered. We characterized areas at two resolutions: 250 m(2) (transect) and approximately 30,000 m(2) (seascape). We considered three categories of environmental variables: substrate type, bottom complexity, and depth. We sought to determine at which resolution habitat characteristics were a better predictor of abundance and species composition of fishes and whether the relations with environmental variables at either resolution affected species' responses to protection. Habitat features accounted for a larger proportion of spatial variation in species composition and abundances than differences in protection status. This spatial variation was explained best by habitat characteristics at the seascape level than at the transect level. Species' responses to protected areas were specific to particular seascape characteristics, primarily depth, and bottom complexity. Our method may be useful for prioritizing marine areas for protection, designing MPAs, and monitoring their effectiveness. It identified areas that provided natural shelter, areas acting as buffer zones, and areas where fish species were most responsive to protection. The identification of such areas is necessary for cost-effective establishment and monitoring of MPAs. ©2010 Society for Conservation Biology.

Covert spatial attention is functionally intact in amblyopic human adults

PubMed Central

Roberts, Mariel; Cymerman, Rachel; Smith, R. Theodore; Kiorpes, Lynne; Carrasco, Marisa

2016-01-01

Certain abnormalities in behavioral performance and neural signaling have been attributed to a deficit of visual attention in amblyopia, a neurodevelopmental disorder characterized by a diverse array of visual deficits following abnormal binocular childhood experience. Critically, most have inferred attention's role in their task without explicitly manipulating and measuring its effects against a baseline condition. Here, we directly investigate whether human amblyopic adults benefit from covert spatial attention—the selective processing of visual information in the absence of eye movements—to the same degree as neurotypical observers. We manipulated both involuntary (Experiment 1) and voluntary (Experiment 2) attention during an orientation discrimination task for which the effects of covert spatial attention have been well established in neurotypical and special populations. In both experiments, attention significantly improved accuracy and decreased reaction times to a similar extent (a) between the eyes of the amblyopic adults and (b) between the amblyopes and their age- and gender-matched controls. Moreover, deployment of voluntary attention away from the target location significantly impaired task performance (Experiment 2). The magnitudes of the involuntary and voluntary attention benefits did not correlate with amblyopic depth or severity. Both groups of observers showed canonical performance fields (better performance along the horizontal than vertical meridian and at the lower than upper vertical meridian) and similar effects of attention across locations. Despite their characteristic low-level vision impairments, covert spatial attention remains functionally intact in human amblyopic adults. PMID:28033433

Tumor Heterogenity Research Interactive Visualization Environment (THRIVE) | Informatics Technology for Cancer Research (ITCR)

Cancer.gov

A platform for quantitative evaluation of intratumoral spatial heterogeneity in multiplexed immunofluorescence images, via characterization of the spatial interactions between different cellular phenotypes and non-cellular constituents in the tumor microenvironment.

Effects of boundaries and geometry on the spatial distribution of action potential duration in cardiac tissue

PubMed Central

Cherry, Elizabeth M.; Fenton, Flavio H.

2011-01-01

Increased dispersion of action potential duration across cardiac tissue has long been considered an important substrate for the development of most electrical arrhythmias. Although this dispersion has been studied previously by characterizing the static intrinsic gradients in cellular electrophysiology and dynamical gradients generated by fast pacing, few studies have concentrated on dispersions generated solely by structural effects. Here we show how boundaries and geometry can produce spatially dependent changes in action potential duration (APD) in homogeneous and isotropic tissue, where all the cells have the same APD in the absence of diffusion. Electrotonic currents due to coupling within the tissue and at the tissue boundaries can generate dispersion, and the profile of this dispersion can change dramatically depending on tissue size and shape, action potential morphology, tissue dimensionality, and stimulus frequency and location. The dispersion generated by pure geometrical effects can be on the order of tens of milliseconds, enough under certain conditions to produce conduction blocks and initiate reentrant waves. PMID:21762703

Exploring the spatial variability of soil properties in an Alfisol Catena

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rosemary, F.; Vitharana, U. W. A.; Indraratne, S. P.

Detailed digital soil maps showing the spatial heterogeneity of soil properties consistent with the landscape are required for site-specific management of plant nutrients, land use planning and process-based environmental modeling. We characterized the short-scale spatial heterogeneity of soil properties in an Alfisol catena in a tropical landscape of Sri Lanka. The impact of different land-uses (paddy, vegetable and un-cultivated) was examined to assess the impact of anthropogenic activities on the variability of soil properties at the catenary level. Conditioned Latin hypercube sampling was used to collect 58 geo-referenced topsoil samples (0–30 cm) from the study area. Soil samples were analyzedmore » for pH, electrical conductivity (EC), organic carbon (OC), cation exchange capacity (CEC) and texture. The spatial correlation between soil properties was analyzed by computing crossvariograms and subsequent fitting of theoretical model. Spatial distribution maps were developed using ordinary kriging. The range of soil properties, pH: 4.3–7.9; EC: 0.01–0.18 dS m –1 ; OC: 0.1–1.37%; CEC: 0.44– 11.51 cmol (+) kg –1 ; clay: 1.5–25% and sand: 59.1–84.4% and their coefficient of variations indicated a large variability in the study area. Electrical conductivity and pH showed a strong spatial correlation which was reflected by the cross-variogram close to the hull of the perfect correlation. Moreover, cross-variograms calculated for EC and Clay, CEC and OC, CEC and clay and CEC and pH indicated weak positive spatial correlation between these properties. Relative nugget effect (RNE) calculated from variograms showed strongly structured spatial variability for pH, EC and sand content (RNE < 25%) while CEC, organic carbon and clay content showed moderately structured spatial variability (25% < RNE < 75%). Spatial dependencies for examined soil properties ranged from 48 to 984 m. The mixed effects model fitting followed by Tukey's post-hoc test showed significant effect of land use on the spatial variability of EC. Our study revealed a structured variability of topsoil properties in the selected tropical Alfisol catena. Except for EC, observed variability was not modified by the land uses. Investigated soil properties showed distinct spatial structures at different scales and magnitudes of strength. Our results will be useful for digital soil mapping, site specific management of soil properties, developing appropriate land use plans and quantifying anthropogenic impacts on the soil system.« less

Characterization of Ultra-fine Grained and Nanocrystalline Materials Using Transmission Kikuchi Diffraction

PubMed Central

Proust, Gwénaëlle; Trimby, Patrick; Piazolo, Sandra; Retraint, Delphine

2017-01-01

One of the challenges in microstructure analysis nowadays resides in the reliable and accurate characterization of ultra-fine grained (UFG) and nanocrystalline materials. The traditional techniques associated with scanning electron microscopy (SEM), such as electron backscatter diffraction (EBSD), do not possess the required spatial resolution due to the large interaction volume between the electrons from the beam and the atoms of the material. Transmission electron microscopy (TEM) has the required spatial resolution. However, due to a lack of automation in the analysis system, the rate of data acquisition is slow which limits the area of the specimen that can be characterized. This paper presents a new characterization technique, Transmission Kikuchi Diffraction (TKD), which enables the analysis of the microstructure of UFG and nanocrystalline materials using an SEM equipped with a standard EBSD system. The spatial resolution of this technique can reach 2 nm. This technique can be applied to a large range of materials that would be difficult to analyze using traditional EBSD. After presenting the experimental set up and describing the different steps necessary to realize a TKD analysis, examples of its use on metal alloys and minerals are shown to illustrate the resolution of the technique and its flexibility in term of material to be characterized. PMID:28447998

Characterization of Ultra-fine Grained and Nanocrystalline Materials Using Transmission Kikuchi Diffraction.

PubMed

Proust, Gwénaëlle; Trimby, Patrick; Piazolo, Sandra; Retraint, Delphine

2017-04-01

One of the challenges in microstructure analysis nowadays resides in the reliable and accurate characterization of ultra-fine grained (UFG) and nanocrystalline materials. The traditional techniques associated with scanning electron microscopy (SEM), such as electron backscatter diffraction (EBSD), do not possess the required spatial resolution due to the large interaction volume between the electrons from the beam and the atoms of the material. Transmission electron microscopy (TEM) has the required spatial resolution. However, due to a lack of automation in the analysis system, the rate of data acquisition is slow which limits the area of the specimen that can be characterized. This paper presents a new characterization technique, Transmission Kikuchi Diffraction (TKD), which enables the analysis of the microstructure of UFG and nanocrystalline materials using an SEM equipped with a standard EBSD system. The spatial resolution of this technique can reach 2 nm. This technique can be applied to a large range of materials that would be difficult to analyze using traditional EBSD. After presenting the experimental set up and describing the different steps necessary to realize a TKD analysis, examples of its use on metal alloys and minerals are shown to illustrate the resolution of the technique and its flexibility in term of material to be characterized.

MeV per Nucleon Ion Irradiation of Nuclear Materials with High Energy Synchrotron X-ray Characterization

DOE PAGES

Pellin, M. J.; Yacout, Abdellatif M.; Mo, Kun; ...

2016-01-14

The combination of MeV/Nucleon ion irradiation (e.g. 133 MeV Xe) and high energy synchrotron x-ray characterization (e.g. at the Argonne Advanced Photon Source, APS) provides a powerful characterization method to understand radiation effects and to rapidly screen materials for the nuclear reactor environment. Ions in this energy range penetrate ~10 μm into materials. Over this range, the physical interactions vary (electronic stopping, nuclear stopping and added interstitials). Spatially specific x-ray (and TEM and nanoindentation) analysis allow individual quantification of these various effects. Hard x-rays provide the penetration depth needed to analyze even nuclear fuels. Here, this combination of synchrotron x-raymore » and MeV/Nucleon ion irradiation is demonstrated on U-Mo fuels. A preliminary look at HT-9 steels is also presented. We suggest that a hard x-ray facility with in situ MeV/nucleon irradiation capability would substantially accelerate the rate of discovery for extreme materials.« less

Phase-dependent outbreak dynamics of geometrid moth linked to host plant phenology.

PubMed

Jepsen, Jane U; Hagen, Snorre B; Karlsen, Stein-Rune; Ims, Rolf A

2009-12-07

Climatically driven Moran effects have often been invoked as the most likely cause of regionally synchronized outbreaks of insect herbivores without identifying the exact mechanism. However, the degree of match between host plant and larval phenology is crucial for the growth and survival of many spring-feeding pest insects, suggesting that a phenological match/mismatch-driven Moran effect may act as a synchronizing agent. We analyse the phase-dependent spatial dynamics of defoliation caused by cyclically outbreaking geometrid moths in northern boreal birch forest in Fennoscandia through the most recent massive outbreak (2000-2008). We use satellite-derived time series of the prevalence of moth defoliation and the onset of the growing season for the entire region to investigate the link between the patterns of defoliation and outbreak spread. In addition, we examine whether a phase-dependent coherence in the pattern of spatial synchrony exists between defoliation and onset of the growing season, in order to evaluate if the degree of matching phenology between the moth and their host plant could be the mechanism behind a Moran effect. The strength of regional spatial synchrony in defoliation and the pattern of defoliation spread were both highly phase-dependent. The incipient phase of the outbreak was characterized by high regional synchrony in defoliation and long spread distances, compared with the epidemic and crash phase. Defoliation spread was best described using a two-scale stratified spread model, suggesting that defoliation spread is governed by two processes operating at different spatial scale. The pattern of phase-dependent spatial synchrony was coherent in both defoliation and onset of the growing season. This suggests that the timing of spring phenology plays a role in the large-scale synchronization of birch forest moth outbreaks.

Phase-dependent outbreak dynamics of geometrid moth linked to host plant phenology

PubMed Central

Jepsen, Jane U.; Hagen, Snorre B.; Karlsen, Stein-Rune; Ims, Rolf A.

2009-01-01

Climatically driven Moran effects have often been invoked as the most likely cause of regionally synchronized outbreaks of insect herbivores without identifying the exact mechanism. However, the degree of match between host plant and larval phenology is crucial for the growth and survival of many spring-feeding pest insects, suggesting that a phenological match/mismatch-driven Moran effect may act as a synchronizing agent. We analyse the phase-dependent spatial dynamics of defoliation caused by cyclically outbreaking geometrid moths in northern boreal birch forest in Fennoscandia through the most recent massive outbreak (2000–2008). We use satellite-derived time series of the prevalence of moth defoliation and the onset of the growing season for the entire region to investigate the link between the patterns of defoliation and outbreak spread. In addition, we examine whether a phase-dependent coherence in the pattern of spatial synchrony exists between defoliation and onset of the growing season, in order to evaluate if the degree of matching phenology between the moth and their host plant could be the mechanism behind a Moran effect. The strength of regional spatial synchrony in defoliation and the pattern of defoliation spread were both highly phase-dependent. The incipient phase of the outbreak was characterized by high regional synchrony in defoliation and long spread distances, compared with the epidemic and crash phase. Defoliation spread was best described using a two-scale stratified spread model, suggesting that defoliation spread is governed by two processes operating at different spatial scale. The pattern of phase-dependent spatial synchrony was coherent in both defoliation and onset of the growing season. This suggests that the timing of spring phenology plays a role in the large-scale synchronization of birch forest moth outbreaks. PMID:19740876

Spatial variation in nutrient and water color effects on lake chlorophyll at macroscales

USGS Publications Warehouse

Fergus, C. Emi; Finley, Andrew O.; Soranno, Patricia A.; Wagner, Tyler

2016-01-01

The nutrient-water color paradigm is a framework to characterize lake trophic status by relating lake primary productivity to both nutrients and water color, the colored component of dissolved organic carbon. Total phosphorus (TP), a limiting nutrient, and water color, a strong light attenuator, influence lake chlorophyll a concentrations (CHL). But, these relationships have been shown in previous studies to be highly variable, which may be related to differences in lake and catchment geomorphology, the forms of nutrients and carbon entering the system, and lake community composition. Because many of these factors vary across space it is likely that lake nutrient and water color relationships with CHL exhibit spatial autocorrelation, such that lakes near one another have similar relationships compared to lakes further away. Including this spatial dependency in models may improve CHL predictions and clarify how well the nutrient-water color paradigm applies to lakes distributed across diverse landscape settings. However, few studies have explicitly examined spatial heterogeneity in the effects of TP and water color together on lake CHL. In this study, we examined spatial variation in TP and water color relationships with CHL in over 800 north temperate lakes using spatially-varying coefficient models (SVC), a robust statistical method that applies a Bayesian framework to explore space-varying and scale-dependent relationships. We found that TP and water color relationships were spatially autocorrelated and that allowing for these relationships to vary by individual lakes over space improved the model fit and predictive performance as compared to models that did not vary over space. The magnitudes of TP effects on CHL differed across lakes such that a 1 μg/L increase in TP resulted in increased CHL ranging from 2–24 μg/L across lake locations. Water color was not related to CHL for the majority of lakes, but there were some locations where water color had a positive effect such that a unit increase in water color resulted in a 2 μg/L increase in CHL and other locations where it had a negative effect such that a unit increase in water color resulted in a 2 μg/L decrease in CHL. In addition, the spatial scales that captured variation in TP and water color effects were different for our study lakes. Variation in TP–CHL relationships was observed at intermediate distances (~20 km) compared to variation in water color–CHL relationships that was observed at regional distances (~200 km). These results demonstrate that there are lake-to-lake differences in the effects of TP and water color on lake CHL and that this variation is spatially structured. Quantifying spatial structure in these relationships furthers our understanding of the variability in these relationships at macroscales and would improve model prediction of chlorophyll a to better meet lake management goals.

Spatial Variation in Nutrient and Water Color Effects on Lake Chlorophyll at Macroscales

PubMed Central

Finley, Andrew O.; Soranno, Patricia A.; Wagner, Tyler

2016-01-01

The nutrient-water color paradigm is a framework to characterize lake trophic status by relating lake primary productivity to both nutrients and water color, the colored component of dissolved organic carbon. Total phosphorus (TP), a limiting nutrient, and water color, a strong light attenuator, influence lake chlorophyll a concentrations (CHL). But, these relationships have been shown in previous studies to be highly variable, which may be related to differences in lake and catchment geomorphology, the forms of nutrients and carbon entering the system, and lake community composition. Because many of these factors vary across space it is likely that lake nutrient and water color relationships with CHL exhibit spatial autocorrelation, such that lakes near one another have similar relationships compared to lakes further away. Including this spatial dependency in models may improve CHL predictions and clarify how well the nutrient-water color paradigm applies to lakes distributed across diverse landscape settings. However, few studies have explicitly examined spatial heterogeneity in the effects of TP and water color together on lake CHL. In this study, we examined spatial variation in TP and water color relationships with CHL in over 800 north temperate lakes using spatially-varying coefficient models (SVC), a robust statistical method that applies a Bayesian framework to explore space-varying and scale-dependent relationships. We found that TP and water color relationships were spatially autocorrelated and that allowing for these relationships to vary by individual lakes over space improved the model fit and predictive performance as compared to models that did not vary over space. The magnitudes of TP effects on CHL differed across lakes such that a 1 μg/L increase in TP resulted in increased CHL ranging from 2–24 μg/L across lake locations. Water color was not related to CHL for the majority of lakes, but there were some locations where water color had a positive effect such that a unit increase in water color resulted in a 2 μg/L increase in CHL and other locations where it had a negative effect such that a unit increase in water color resulted in a 2 μg/L decrease in CHL. In addition, the spatial scales that captured variation in TP and water color effects were different for our study lakes. Variation in TP–CHL relationships was observed at intermediate distances (~20 km) compared to variation in water color–CHL relationships that was observed at regional distances (~200 km). These results demonstrate that there are lake-to-lake differences in the effects of TP and water color on lake CHL and that this variation is spatially structured. Quantifying spatial structure in these relationships furthers our understanding of the variability in these relationships at macroscales and would improve model prediction of chlorophyll a to better meet lake management goals. PMID:27736962

From brain to earth and climate systems: small-world interaction networks or not?

PubMed

Bialonski, Stephan; Horstmann, Marie-Therese; Lehnertz, Klaus

2010-03-01

We consider recent reports on small-world topologies of interaction networks derived from the dynamics of spatially extended systems that are investigated in diverse scientific fields such as neurosciences, geophysics, or meteorology. With numerical simulations that mimic typical experimental situations, we have identified an important constraint when characterizing such networks: indications of a small-world topology can be expected solely due to the spatial sampling of the system along with the commonly used time series analysis based approaches to network characterization.

Comparative analysis of ferroelectric domain statistics via nonlinear diffraction in random nonlinear materials.

PubMed

Wang, B; Switowski, K; Cojocaru, C; Roppo, V; Sheng, Y; Scalora, M; Kisielewski, J; Pawlak, D; Vilaseca, R; Akhouayri, H; Krolikowski, W; Trull, J

2018-01-22

We present an indirect, non-destructive optical method for domain statistic characterization in disordered nonlinear crystals having homogeneous refractive index and spatially random distribution of ferroelectric domains. This method relies on the analysis of the wave-dependent spatial distribution of the second harmonic, in the plane perpendicular to the optical axis in combination with numerical simulations. We apply this technique to the characterization of two different media, Calcium Barium Niobate and Strontium Barium Niobate, with drastically different statistical distributions of ferroelectric domains.

Using solute and heat tracers for aquifer characterization in a strongly heterogeneous alluvial aquifer

NASA Astrophysics Data System (ADS)

Sarris, Theo S.; Close, Murray; Abraham, Phillip

2018-03-01

A test using Rhodamine WT and heat as tracers, conducted over a 78 day period in a strongly heterogeneous alluvial aquifer, was used to evaluate the utility of the combined observation dataset for aquifer characterization. A highly parameterized model was inverted, with concentration and temperature time-series as calibration targets. Groundwater heads recorded during the experiment were boundary dependent and were ignored during the inversion process. The inverted model produced a high resolution depiction of the hydraulic conductivity and porosity fields. Statistical properties of these fields are in very good agreement with estimates from previous studies at the site. Spatially distributed sensitivity analysis suggests that both solute and heat transport were most sensitive to the hydraulic conductivity and porosity fields and less sensitive to dispersivity and thermal distribution factor, with sensitivity to porosity greatly reducing outside the monitored area. The issues of model over-parameterization and non-uniqueness are addressed through identifiability analysis. Longitudinal dispersivity and thermal distribution factor are highly identifiable, however spatially distributed parameters are only identifiable near the injection point. Temperature related density effects became observable for both heat and solute, as the temperature anomaly increased above 12 degrees centigrade, and affected down gradient propagation. Finally we demonstrate that high frequency and spatially dense temperature data cannot inform a dual porosity model in the absence of frequent solute concentration measurements.

Cell-type- and tissue-specific transcriptomes of the white spruce (Picea glauca) bark unmask fine-scale spatial patterns of constitutive and induced conifer defense.

PubMed

Celedon, Jose M; Yuen, Macaire M S; Chiang, Angela; Henderson, Hannah; Reid, Karen E; Bohlmann, Jörg

2017-11-01

Plant defenses often involve specialized cells and tissues. In conifers, specialized cells of the bark are important for defense against insects and pathogens. Using laser microdissection, we characterized the transcriptomes of cortical resin duct cells, phenolic cells and phloem of white spruce (Picea glauca) bark under constitutive and methyl jasmonate (MeJa)-induced conditions, and we compared these transcriptomes with the transcriptome of the bark tissue complex. Overall, ~3700 bark transcripts were differentially expressed in response to MeJa. Approximately 25% of transcripts were expressed in only one cell type, revealing cell specialization at the transcriptome level. MeJa caused cell-type-specific transcriptome responses and changed the overall patterns of cell-type-specific transcript accumulation. Comparison of transcriptomes of the conifer bark tissue complex and specialized cells resolved a masking effect inherent to transcriptome analysis of complex tissues, and showed the actual cell-type-specific transcriptome signatures. Characterization of cell-type-specific transcriptomes is critical to reveal the dynamic patterns of spatial and temporal display of constitutive and induced defense systems in a complex plant tissue or organ. This was demonstrated with the improved resolution of spatially restricted expression of sets of genes of secondary metabolism in the specialized cell types. © 2017 The Authors The Plant Journal published by John Wiley & Sons Ltd and Society for Experimental Biology.

Heart-Brain Interactions in the MR Environment: Characterization of the Ballistocardiogram in EEG Signals Collected During Simultaneous fMRI.

PubMed

Marino, Marco; Liu, Quanying; Del Castello, Mariangela; Corsi, Cristiana; Wenderoth, Nicole; Mantini, Dante

2018-05-01

The ballistocardiographic (BCG) artifact is linked to cardiac activity and occurs in electroencephalographic (EEG) recordings acquired inside the magnetic resonance (MR) environment. Its variability in terms of amplitude, waveform shape and spatial distribution over subject's scalp makes its attenuation a challenging task. In this study, we aimed to provide a detailed characterization of the BCG properties, including its temporal dependency on cardiac events and its spatio-temporal dynamics. To this end, we used high-density EEG data acquired during simultaneous functional MR imaging in six healthy volunteers. First, we investigated the relationship between cardiac activity and BCG occurrences in the EEG recordings. We observed large variability in the delay between ECG and subsequent BCG events (ECG-BCG delay) across subjects and non-negligible epoch-by-epoch variations at the single subject level. The inspection of spatial-temporal variations revealed a prominent non-stationarity of the BCG signal. We identified five main BCG waves, which were common across subjects. Principal component analysis revealed two spatially distinct patterns to explain most of the variance (85% in total). These components are possibly related to head rotation and pulse-driven scalp expansion, respectively. Our results may inspire the development of novel, more effective methods for the removal of the BCG, capable of isolating and attenuating artifact occurrences while preserving true neuronal activity.

The spatial distribution of gender differences in obesity prevalence differs from overall obesity prevalence among US adults

PubMed Central

Gartner, Danielle R.; Taber, Daniel R.; Hirsch, Jana A.; Robinson, Whitney R.

2016-01-01

Purpose While obesity disparities between racial and socioeconomic groups have been well characterized, those based on gender and geography have not been as thoroughly documented. This study describes obesity prevalence by state, gender, and race/ethnicity to (1) characterize obesity gender inequality, (2) determine if the geographic distribution of inequality is spatially clustered and (3) contrast the spatial clustering patterns of obesity gender inequality with overall obesity prevalence. Methods Data from the Centers for Disease Control and Prevention’s 2013 Behavioral Risk Factor Surveillance System (BRFSS) were used to calculate state-specific obesity prevalence and gender inequality measures. Global and Local Moran’s Indices were calculated to determine spatial autocorrelation. Results Age-adjusted, state-specific obesity prevalence difference and ratio measures show spatial autocorrelation (z-score=4.89, p-value <0.001). Local Moran’s Indices indicate the spatial distributions of obesity prevalence and obesity gender inequalities are not the same. High and low values of obesity prevalence and gender inequalities cluster in different areas of the U.S. Conclusion Clustering of gender inequality suggests that spatial processes operating at the state level, such as occupational or physical activity policies or social norms, are involved in the etiology of the inequality and necessitate further attention to the determinates of obesity gender inequality. PMID:27039046

Characterization of scatter in digital mammography from physical measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leon, Stephanie M., E-mail: Stephanie.Leon@uth.tmc.edu; Wagner, Louis K.; Brateman, Libby F.

2014-06-15

Purpose: That scattered radiation negatively impacts the quality of medical radiographic imaging is well known. In mammography, even slight amounts of scatter reduce the high contrast required for subtle soft-tissue imaging. In current clinical mammography, image contrast is partially improved by use of an antiscatter grid. This form of scatter rejection comes with a sizeable dose penalty related to the concomitant elimination of valuable primary radiation. Digital mammography allows the use of image processing as a method of scatter correction that might avoid effects that negatively impact primary radiation, while potentially providing more contrast improvement than is currently possible withmore » a grid. For this approach to be feasible, a detailed characterization of the scatter is needed. Previous research has modeled scatter as a constant background that serves as a DC bias across the imaging surface. The goal of this study was to provide a more substantive data set for characterizing the spatially-variant features of scatter radiation at the image detector of modern mammography units. Methods: This data set was acquired from a model of the radiation beam as a matrix of very narrow rays or pencil beams. As each pencil beam penetrates tissue, the pencil widens in a predictable manner due to the production of scatter. The resultant spreading of the pencil beam at the detector surface can be characterized by two parameters: mean radial extent (MRE) and scatter fraction (SF). The SF and MRE were calculated from measurements obtained using the beam stop method. Two digital mammography units were utilized, and the SF and MRE were found as functions of target, filter, tube potential, phantom thickness, and presence or absence of a grid. These values were then used to generate general equations allowing the SF and MRE to be calculated for any combination of the above parameters. Results: With a grid, the SF ranged from a minimum of about 0.05 to a maximum of about 0.16, and the MRE ranged from about 3 to 13 mm. Without a grid, the SF ranged from a minimum of 0.25 to a maximum of 0.52, and the MRE ranged from about 20 to 45 mm. The SF with a grid demonstrated a mild dependence on target/filter combination and kV, whereas the SF without a grid was independent of these factors. The MRE demonstrated a complex relationship as a function of kV, with notable difference among target/filter combinations. The primary source of change in both the SF and MRE was phantom thickness. Conclusions: Because breast tissue varies spatially in physical density and elemental content, the effective thickness of breast tissue varies spatially across the imaging field, resulting in a spatially-variant scatter distribution in the imaging field. The data generated in this study can be used to characterize the scatter contribution on a point-by-point basis, for a variety of different techniques.« less

Evaluation of Satellite Remote Sensing Albedo Retrievals over the Ablation Area of the Southwestern Greenland Ice Sheet

NASA Technical Reports Server (NTRS)

Moustafa, Samiah E.; Rennermalm, Asa K.; Roman, Miguel O.; Wang, Zhuosen; Schaaf, Crystal B.; Smith, Laurence C.; Koenig, Lora S.; Erb, Angela

2017-01-01

MODerate resolution Imaging Spectroradiometer (MODIS) albedo products have been validated over spatially uniform, snow-covered areas of the Greenland ice sheet (GrIS) using the so-called single 'point-to-pixel' method. This study expands on this methodology by applying a 'multiple-point-to-pixel' method and examination of spatial autocorrelation (here using semivariogram analysis) by using in situ observations, high-resolution World- View-2 (WV-2) surface reflectances, and MODIS Collection V006 daily blue-sky albedo over a spatially heterogeneous surfaces in the lower ablation zone in southwest Greenland. Our results using 232 ground-based samples within two MODIS pixels, one being more spatial heterogeneous than the other, show little difference in accuracy among narrow and broad band albedos (except for Band 2). Within the more homogenous pixel area, in situ and MODIS albedos were very close (error varied from -4% to +7%) and within the range of ASD standard errors. The semivariogram analysis revealed that the minimum observational footprint needed for a spatially representative sample is 30 m. In contrast, over the more spatially heterogeneous surface pixel, a minimum footprint size was not quantifiable due to spatial autocorrelation, and far exceeds the effective resolution of the MODIS retrievals. Over the high spatial heterogeneity surface pixel, MODIS is lower than ground measurements by 4-7%, partly due to a known in situ undersampling of darker surfaces that often are impassable by foot (e.g., meltwater features and shadowing effects over crevasses). Despite the sampling issue, our analysis errors are very close to the stated general accuracy of the MODIS product of 5%. Thus, our study suggests that the MODIS albedo product performs well in a very heterogeneous, low-albedo, area of the ice sheet ablation zone. Furthermore, we demonstrate that single 'point-to-pixel' methods alone are insufficient in characterizing and validating the variation of surface albedo displayed in the lower ablation area. This is true because the distribution of in situ data deviations from MODIS albedo show a substantial range, with the average values for the 10th and 90th percentiles being -0.30 and 0.43 across all bands. Thus, if only single point is taken for ground validation, and is randomly selected from either distribution tails, the error would appear to be considerable. Given the need for multiple in-situ points, concurrent albedo measurements derived from existing AWSs, (low-flying vehicles (airborne or unmanned) and high-resolution imagery (WV-2)) are needed to resolve high sub-pixel variability in the ablation zone, and thus, further improve our characterization of Greenland's surface albedo.

Quantifying geological uncertainty for flow and transport modeling in multi-modal heterogeneous formations

NASA Astrophysics Data System (ADS)

Feyen, Luc; Caers, Jef

2006-06-01

In this work, we address the problem of characterizing the heterogeneity and uncertainty of hydraulic properties for complex geological settings. Hereby, we distinguish between two scales of heterogeneity, namely the hydrofacies structure and the intrafacies variability of the hydraulic properties. We employ multiple-point geostatistics to characterize the hydrofacies architecture. The multiple-point statistics are borrowed from a training image that is designed to reflect the prior geological conceptualization. The intrafacies variability of the hydraulic properties is represented using conventional two-point correlation methods, more precisely, spatial covariance models under a multi-Gaussian spatial law. We address the different levels and sources of uncertainty in characterizing the subsurface heterogeneity, and explore their effect on groundwater flow and transport predictions. Typically, uncertainty is assessed by way of many images, termed realizations, of a fixed statistical model. However, in many cases, sampling from a fixed stochastic model does not adequately represent the space of uncertainty. It neglects the uncertainty related to the selection of the stochastic model and the estimation of its input parameters. We acknowledge the uncertainty inherent in the definition of the prior conceptual model of aquifer architecture and in the estimation of global statistics, anisotropy, and correlation scales. Spatial bootstrap is used to assess the uncertainty of the unknown statistical parameters. As an illustrative example, we employ a synthetic field that represents a fluvial setting consisting of an interconnected network of channel sands embedded within finer-grained floodplain material. For this highly non-stationary setting we quantify the groundwater flow and transport model prediction uncertainty for various levels of hydrogeological uncertainty. Results indicate the importance of accurately describing the facies geometry, especially for transport predictions.

Spatial and seasonal characterization of net primary productivity and climate variables in southeastern China using MODIS data*

PubMed Central

Peng, Dai-liang; Huang, Jing-feng; Huete, Alfredo R.; Yang, Tai-ming; Gao, Ping; Chen, Yan-chun; Chen, Hui; Li, Jun; Liu, Zhan-yu

2010-01-01

We developed a sophisticated method to depict the spatial and seasonal characterization of net primary productivity (NPP) and climate variables. The role of climate variability in the seasonal variation of NPP exerts delayed and continuous effects. This study expands on this by mapping the seasonal characterization of NPP and climate variables from space using geographic information system (GIS) technology at the pixel level. Our approach was developed in southeastern China using moderate-resolution imaging spectroradiometer (MODIS) data. The results showed that air temperature, precipitation and sunshine percentage contributed significantly to seasonal variation of NPP. In the northern portion of the study area, a significant positive 32-d lagged correlation was observed between seasonal variation of NPP and climate (P<0.01), and the influences of changing climate on NPP lasted for 48 d or 64 d. In central southeastern China, NPP showed 16-d, 48-d, and 96-d lagged correlation with air temperature, precipitation, and sunshine percentage, respectively (P<0.01); the influences of air temperature and precipitation on NPP lasted for 48 d or 64 d, while sunshine influence on NPP only persisted for 16 d. Due to complex topography and vegetation distribution in the southern part of the study region, the spatial patterns of vegetation-climate relationship became complicated and diversiform, especially for precipitation influences on NPP. In the northern part of the study area, all vegetation NPP had an almost similar response to seasonal variation of air temperature except for broad crops. The impacts of seasonal variation of precipitation and sunshine on broad and cereal crop NPP were slightly different from other vegetation NPP. PMID:20349524

Real-space imaging of a topologically protected edge state with ultracold atoms in an amplitude-chirped optical lattice

PubMed Central

Leder, Martin; Grossert, Christopher; Sitta, Lukas; Genske, Maximilian; Rosch, Achim; Weitz, Martin

2016-01-01

To describe a mobile defect in polyacetylene chains, Su, Schrieffer and Heeger formulated a model assuming two degenerate energy configurations that are characterized by two different topological phases. An immediate consequence was the emergence of a soliton-type edge state located at the boundary between two regions of different configurations. Besides giving first insights in the electrical properties of polyacetylene materials, interest in this effect also stems from its close connection to states with fractional charge from relativistic field theory. Here, using a one-dimensional optical lattice for cold rubidium atoms with a spatially chirped amplitude, we experimentally realize an interface between two spatial regions of different topological order in an atomic physics system. We directly observe atoms confined in the edge state at the intersection by optical real-space imaging and characterize the state as well as the size of the associated energy gap. Our findings hold prospects for the spectroscopy of surface states in topological matter and for the quantum simulation of interacting Dirac systems. PMID:27767054

Submillimeter-scale heterogeneity of labile phosphorus in sediments characterized by diffusive gradients in thin films and spatial analysis.

PubMed

Meng, Yuting; Ding, Shiming; Gong, Mengdan; Chen, Musong; Wang, Yan; Fan, Xianfang; Shi, Lei; Zhang, Chaosheng

2018-03-01

Sediments have a heterogeneous distribution of labile redox-sensitive elements due to a drastic downward transition from oxic to anoxic condition as a result of organic matter degradation. Characterization of the heterogeneous nature of sediments is vital for understanding of small-scale biogeochemical processes. However, there are limited reports on the related specialized methodology. In this study, the monthly distributions of labile phosphorus (P), a redox-sensitive limiting nutrient, were measured in the eutrophic Lake Taihu by Zr-oxide diffusive gradients in thin films (Zr-oxide DGT) on a two-dimensional (2D) submillimeter level. Geographical information system (GIS) techniques were used to visualize the labile P distribution at such a micro-scale, showing that the DGT-labile P was low in winter and high in summer. Spatial analysis methods, including semivariogram and Moran's I, were used to quantify the spatial variation of DGT-labile P. The distribution of DGT-labile P had clear submillimeter-scale spatial patterns with significant spatial autocorrelation during the whole year and displayed seasonal changes. High values of labile P with strong spatial variation were observed in summer, while low values of labile P with relatively uniform spatial patterns were detected in winter, demonstrating the strong influences of temperature on the mobility and spatial distribution of P in sediment profiles. Copyright © 2017 Elsevier Ltd. All rights reserved.

Impairments in Precision, Rather than Spatial Strategy, Characterize Performance on the Virtual Morris Water Maze: A Case Study

PubMed Central

Kolarik, Branden S.; Shahlaie, Kiarash; Hassan, Abdul; Borders, Alyssa A.; Kaufman, Kyle C.; Gurkoff, Gene; Yonelinas, Andy P.; Ekstrom, Arne D.

2015-01-01

Damage to the medial temporal lobes produces profound amnesia, greatly impairing the ability of patients to learn about new associations and events. While studies in rodents suggest a strong link between damage to the hippocampus and the ability to navigate using distal landmarks in a spatial environment, the connection between navigation and memory in humans remains less clear. Past studies on human navigation have provided mixed findings about whether patients with damage to the medial temporal lobes can successfully acquire and navigate new spatial environments, possibly due, in part, to issues related to patient demographics and characterization of medial temporal lobe damage. Here, we report findings from a young, high functioning patient who suffered severe medial temporal lobe damage. Although the patient is densely amnestic, her ability to acquire and utilize new, but coarse, spatial “maps” appears largely intact. Specifically, a novel computational analysis focused on the precision of her spatial search revealed a significant deficit in spatial precision rather than spatial search strategy. These findings argue that an intact hippocampus in humans is not necessary for representing multiple external landmarks during spatial navigation of new environments. We suggest instead that the human hippocampus may store and represent complex high-resolution bindings of features in the environment as part of a larger role in perception, memory, and navigation. PMID:26593960

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hall, G. N., E-mail: hall98@llnl.gov; Izumi, N.; Landen, O. L.

Compton radiography provides a means to measure the integrity, ρR and symmetry of the DT fuel in an inertial confinement fusion implosion near peak compression. Upcoming experiments at the National Ignition Facility will use the ARC (Advanced Radiography Capability) laser to drive backlighter sources for Compton radiography experiments and will use the newly commissioned AXIS (ARC X-ray Imaging System) instrument as the detector. AXIS uses a dual-MCP (micro-channel plate) to provide gating and high DQE at the 40–200 keV x-ray range required for Compton radiography, but introduces many effects that contribute to the spatial resolution. Experiments were performed at energiesmore » relevant to Compton radiography to begin characterization of the spatial resolution of the AXIS diagnostic.« less

Experiments to Evaluate and Implement Passive Tracer Gas Methods to Measure Ventilation Rates in Homes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lunden, Melissa; Faulkner, David; Heredia, Elizabeth

2012-10-01

This report documents experiments performed in three homes to assess the methodology used to determine air exchange rates using passive tracer techniques. The experiments used four different tracer gases emitted simultaneously but implemented with different spatial coverage in the home. Two different tracer gas sampling methods were used. The results characterize the factors of the execution and analysis of the passive tracer technique that affect the uncertainty in the calculated air exchange rates. These factors include uncertainties in tracer gas emission rates, differences in measured concentrations for different tracer gases, temporal and spatial variability of the concentrations, the comparison betweenmore » different gas sampling methods, and the effect of different ventilation conditions.« less

Spatial distribution of nuclei in progressive nucleation: Modeling and application

NASA Astrophysics Data System (ADS)

Tomellini, Massimo

2018-04-01

Phase transformations ruled by non-simultaneous nucleation and growth do not lead to random distribution of nuclei. Since nucleation is only allowed in the untransformed portion of space, positions of nuclei are correlated. In this article an analytical approach is presented for computing pair-correlation function of nuclei in progressive nucleation. This quantity is further employed for characterizing the spatial distribution of nuclei through the nearest neighbor distribution function. The modeling is developed for nucleation in 2D space with power growth law and it is applied to describe electrochemical nucleation where correlation effects are significant. Comparison with both computer simulations and experimental data lends support to the model which gives insights into the transition from Poissonian to correlated nearest neighbor probability density.

Adiabatic Edge Channel Transport in a Nanowire Quantum Point Contact Register.

PubMed

Heedt, S; Manolescu, A; Nemnes, G A; Prost, W; Schubert, J; Grützmacher, D; Schäpers, Th

2016-07-13

We report on a prototype device geometry where a number of quantum point contacts are connected in series in a single quasi-ballistic InAs nanowire. At finite magnetic field the backscattering length is increased up to the micron-scale and the quantum point contacts are connected adiabatically. Hence, several input gates can control the outcome of a ballistic logic operation. The absence of backscattering is explained in terms of selective population of spatially separated edge channels. Evidence is provided by regular Aharonov-Bohm-type conductance oscillations in transverse magnetic fields, in agreement with magnetoconductance calculations. The observation of the Shubnikov-de Haas effect at large magnetic fields corroborates the existence of spatially separated edge channels and provides a new means for nanowire characterization.

Spatial effect of conical angle on optical-thermal distribution for circumferential photocoagulation

PubMed Central

Truong, Van Gia; Park, Suhyun; Tran, Van Nam; Kang, Hyun Wook

2017-01-01

A uniformly diffusing applicator can be advantageous for laser treatment of tubular tissue. The current study investigated various conical angles for diffuser tips as a critical factor for achieving radially uniform light emission. A customized goniometer was employed to characterize the spatial uniformity of the light propagation. An ex vivo model was developed to quantitatively compare the temperature development and irreversible tissue coagulation. The 10-mm diffuser tip with angle at 25° achieved a uniform longitudinal intensity profile (i.e., 0.90 ± 0.07) as well as a consistent thermal denaturation on the tissue. The proposed conical angle can be instrumental in determining the uniformity of light distribution for the photothermal treatment of tubular tissue. PMID:29296495

Out with the Old and in with the New—Is Backward Inhibition a Domain-Specific Process?

PubMed Central

Menghini, Deny; Vicari, Stefano; Petrosini, Laura; Ferlazzo, Fabio

2015-01-01

Effective task switching is supported by the inhibition of the just executed task, so that potential interference from previously executed tasks is adaptively counteracted. This inhibitory mechanism, named Backward Inhibition (BI), has been inferred from the finding that switching back to a recently executed task (A-B-A task sequence) is harder than switching back to a less recently executed task (C-B-A task sequence). Despite the fact that BI effects do impact performance on everyday life activities, up to now it is still not clear whether the BI represents an amodal and material-independent process or whether it interacts with the task material. To address this issue, a group of individuals with Williams syndrome (WS) characterized by specific difficulties in maintaining and processing visuo-spatial, but not verbal, information, and a mental age- and gender-matched group of typically developing (TD) children were subjected to three task-switching experiments requiring verbal or visuo-spatial material to be processed. Results showed that individuals with WS exhibited a normal BI effect during verbal task-switching, but a clear deficit during visuo-spatial task-switching. Overall, our findings demonstrating that the BI is a material-specific process have important implications for theoretical models of cognitive control and its architecture. PMID:26565628

a Rough Set Decision Tree Based Mlp-Cnn for Very High Resolution Remotely Sensed Image Classification

NASA Astrophysics Data System (ADS)

Zhang, C.; Pan, X.; Zhang, S. Q.; Li, H. P.; Atkinson, P. M.

2017-09-01

Recent advances in remote sensing have witnessed a great amount of very high resolution (VHR) images acquired at sub-metre spatial resolution. These VHR remotely sensed data has post enormous challenges in processing, analysing and classifying them effectively due to the high spatial complexity and heterogeneity. Although many computer-aid classification methods that based on machine learning approaches have been developed over the past decades, most of them are developed toward pixel level spectral differentiation, e.g. Multi-Layer Perceptron (MLP), which are unable to exploit abundant spatial details within VHR images. This paper introduced a rough set model as a general framework to objectively characterize the uncertainty in CNN classification results, and further partition them into correctness and incorrectness on the map. The correct classification regions of CNN were trusted and maintained, whereas the misclassification areas were reclassified using a decision tree with both CNN and MLP. The effectiveness of the proposed rough set decision tree based MLP-CNN was tested using an urban area at Bournemouth, United Kingdom. The MLP-CNN, well capturing the complementarity between CNN and MLP through the rough set based decision tree, achieved the best classification performance both visually and numerically. Therefore, this research paves the way to achieve fully automatic and effective VHR image classification.

Dopamine and Octopamine Influence Avoidance Learning of Honey Bees in a Place Preference Assay

PubMed Central

Agarwal, Maitreyi; Giannoni Guzmán, Manuel; Morales-Matos, Carla; Del Valle Díaz, Rafael Alejandro; Abramson, Charles I.; Giray, Tugrul

2011-01-01

Biogenic amines are widely characterized in pathways evaluating reward and punishment, resulting in appropriate aversive or appetitive responses of vertebrates and invertebrates. We utilized the honey bee model and a newly developed spatial avoidance conditioning assay to probe effects of biogenic amines octopamine (OA) and dopamine (DA) on avoidance learning. In this new protocol non-harnessed bees associate a spatial color cue with mild electric shock punishment. After a number of experiences with color and shock the bees no longer enter the compartment associated with punishment. Intrinsic aspects of avoidance conditioning are associated with natural behavior of bees such as punishment (lack of food, explosive pollination mechanisms, danger of predation, heat, etc.) and their association to floral traits or other spatial cues during foraging. The results show that DA reduces the punishment received whereas octopamine OA increases the punishment received. These effects are dose-dependent and specific to the acquisition phase of training. The effects during acquisition are specific as shown in experiments using the antagonists Pimozide and Mianserin for DA and OA receptors, respectively. This study demonstrates the integrative role of biogenic amines in aversive learning in the honey bee as modeled in a novel non-appetitive avoidance learning assay. PMID:21980435

Auditory spatial attention to speech and complex non-speech sounds in children with autism spectrum disorder.

PubMed

Soskey, Laura N; Allen, Paul D; Bennetto, Loisa

2017-08-01

One of the earliest observable impairments in autism spectrum disorder (ASD) is a failure to orient to speech and other social stimuli. Auditory spatial attention, a key component of orienting to sounds in the environment, has been shown to be impaired in adults with ASD. Additionally, specific deficits in orienting to social sounds could be related to increased acoustic complexity of speech. We aimed to characterize auditory spatial attention in children with ASD and neurotypical controls, and to determine the effect of auditory stimulus complexity on spatial attention. In a spatial attention task, target and distractor sounds were played randomly in rapid succession from speakers in a free-field array. Participants attended to a central or peripheral location, and were instructed to respond to target sounds at the attended location while ignoring nearby sounds. Stimulus-specific blocks evaluated spatial attention for simple non-speech tones, speech sounds (vowels), and complex non-speech sounds matched to vowels on key acoustic properties. Children with ASD had significantly more diffuse auditory spatial attention than neurotypical children when attending front, indicated by increased responding to sounds at adjacent non-target locations. No significant differences in spatial attention emerged based on stimulus complexity. Additionally, in the ASD group, more diffuse spatial attention was associated with more severe ASD symptoms but not with general inattention symptoms. Spatial attention deficits have important implications for understanding social orienting deficits and atypical attentional processes that contribute to core deficits of ASD. Autism Res 2017, 10: 1405-1416. © 2017 International Society for Autism Research, Wiley Periodicals, Inc. © 2017 International Society for Autism Research, Wiley Periodicals, Inc.

Internal noise sources limiting contrast sensitivity.

PubMed

Silvestre, Daphné; Arleo, Angelo; Allard, Rémy

2018-02-07

Contrast sensitivity varies substantially as a function of spatial frequency and luminance intensity. The variation as a function of luminance intensity is well known and characterized by three laws that can be attributed to the impact of three internal noise sources: early spontaneous neural activity limiting contrast sensitivity at low luminance intensities (i.e. early noise responsible for the linear law), probabilistic photon absorption at intermediate luminance intensities (i.e. photon noise responsible for de Vries-Rose law) and late spontaneous neural activity at high luminance intensities (i.e. late noise responsible for Weber's law). The aim of this study was to characterize how the impact of these three internal noise sources vary with spatial frequency and determine which one is limiting contrast sensitivity as a function of luminance intensity and spatial frequency. To estimate the impact of the different internal noise sources, the current study used an external noise paradigm to factorize contrast sensitivity into equivalent input noise and calculation efficiency over a wide range of luminance intensities and spatial frequencies. The impact of early and late noise was found to drop linearly with spatial frequency, whereas the impact of photon noise rose with spatial frequency due to ocular factors.

Effects of underwater turbulence on laser beam propagation and coupling into single-mode optical fiber.

PubMed

Hanson, Frank; Lasher, Mark

2010-06-01

We characterize and compare the effects of turbulence on underwater laser propagation with theory. Measurements of the coupling efficiency of the focused beam into a single-mode fiber are reported. A simple tip-tilt control system, based on the position of the image centroid in the focal plane, was shown to maintain good coupling efficiency for a beam radius equal to the transverse coherence length, r(0). These results are relevant to high bandwidth communication technology that requires good spatial mode quality.

Rural-Urban Migration in D-Dimensional Lattices

NASA Astrophysics Data System (ADS)

Espíndola, Aquino L.; Penna, T. J. P.; Silveira, Jaylson J.

The rural-urban migration phenomenon is analyzed by using an agent-based computational model. Agents are placed on lattices which dimensions varying from d =2 up to d =7. The localization of the agents in the lattice defines that their social neighborhood (rural or urban) is not related to their spatial distribution. The effect of the dimension of lattice is studied by analyzing the variation of the main parameters that characterizes the migratory process. The dynamics displays strong effects even for around one million of sites, in higher dimensions (d =6, 7).

Use of LANDSAT images of vegetation cover to estimate effective hydraulic properties of soils

NASA Technical Reports Server (NTRS)

Eagleson, Peter S.; Jasinski, Michael F.

1988-01-01

This work focuses on the characterization of natural, spatially variable, semivegetated landscapes using a linear, stochastic, canopy-soil reflectance model. A first application of the model was the investigation of the effects of subpixel and regional variability of scenes on the shape and structure of red-infrared scattergrams. Additionally, the model was used to investigate the inverse problem, the estimation of subpixel vegetation cover, given only the scattergrams of simulated satellite scale multispectral scenes. The major aspects of that work, including recent field investigations, are summarized.

Characterizing China's energy consumption with selective economic factors and energy-resource endowment: a spatial econometric approach

NASA Astrophysics Data System (ADS)

Jiang, Lei; Ji, Minhe; Bai, Ling

2015-06-01

Coupled with intricate regional interactions, the provincial disparity of energy-resource endowment and other economic conditions in China have created spatially complex energy consumption patterns that require analyses beyond the traditional ones. To distill the spatial effect out of the resource and economic factors on China's energy consumption, this study recast the traditional econometric model in a spatial context. Several analytic steps were taken to reveal different aspects of the issue. Per capita energy consumption (AVEC) at the provincial level was first mapped to reveal spatial clusters of high energy consumption being located in either well developed or energy resourceful regions. This visual spatial autocorrelation pattern of AVEC was quantitatively tested to confirm its existence among Chinese provinces. A Moran scatterplot was employed to further display a relatively centralized trend occurring in those provinces that had parallel AVEC, revealing a spatial structure with attraction among high-high or low-low regions and repellency among high-low or low-high regions. By a comparison between the ordinary least square (OLS) model and its spatial econometric counterparts, a spatial error model (SEM) was selected to analyze the impact of major economic determinants on AVEC. While the analytic results revealed a significant positive correlation between AVEC and economic development, other determinants showed some intricate influential patterns. The provinces endowed with rich energy reserves were inclined to consume much more energy than those otherwise, whereas changing the economic structure by increasing the proportion of secondary and tertiary industries also tended to consume more energy. Both situations seem to underpin the fact that these provinces were largely trapped in the economies that were supported by technologies of low energy efficiency during the period, while other parts of the country were rapidly modernized by adopting advanced technologies and more efficient industries. On the other hand, institutional change (i.e., marketization) and innovation (i.e., technological progress) exerted positive impacts on AVEC improvement, as always expected in this and other studies. Finally, the model comparison indicated that SEM was capable of separating spatial effect from the error term of OLS, so as to improve goodness-of-fit and the significance level of individual determinants.

Distributed Soil Moisture Estimation in a Mountainous Semiarid Basin: Constraining Soil Parameter Uncertainty through Field Studies

NASA Astrophysics Data System (ADS)

Yatheendradas, S.; Vivoni, E.

2007-12-01

A common practice in distributed hydrological modeling is to assign soil hydraulic properties based on coarse textural datasets. For semiarid regions with poor soil information, the performance of a model can be severely constrained due to the high model sensitivity to near-surface soil characteristics. Neglecting the uncertainty in soil hydraulic properties, their spatial variation and their naturally-occurring horizonation can potentially affect the modeled hydrological response. In this study, we investigate such effects using the TIN-based Real-time Integrated Basin Simulator (tRIBS) applied to the mid-sized (100 km2) Sierra Los Locos watershed in northern Sonora, Mexico. The Sierra Los Locos basin is characterized by complex mountainous terrain leading to topographic organization of soil characteristics and ecosystem distributions. We focus on simulations during the 2004 North American Monsoon Experiment (NAME) when intensive soil moisture measurements and aircraft- based soil moisture retrievals are available in the basin. Our experiments focus on soil moisture comparisons at the point, topographic transect and basin scales using a range of different soil characterizations. We compare the distributed soil moisture estimates obtained using (1) a deterministic simulation based on soil texture from coarse soil maps, (2) a set of ensemble simulations that capture soil parameter uncertainty and their spatial distribution, and (3) a set of simulations that conditions the ensemble on recent soil profile measurements. Uncertainties considered in near-surface soil characterization provide insights into their influence on the modeled uncertainty, into the value of soil profile observations, and into effective use of on-going field observations for constraining the soil moisture response uncertainty.

Photothermal imaging scanning microscopy

DOEpatents

Chinn, Diane [Pleasanton, CA; Stolz, Christopher J [Lathrop, CA; Wu, Zhouling [Pleasanton, CA; Huber, Robert [Discovery Bay, CA; Weinzapfel, Carolyn [Tracy, CA

2006-07-11

Photothermal Imaging Scanning Microscopy produces a rapid, thermal-based, non-destructive characterization apparatus. Also, a photothermal characterization method of surface and subsurface features includes micron and nanoscale spatial resolution of meter-sized optical materials.

Assessing the effects of land use changes on soil sensitivity to erosion in a highland ecosystem of semi-arid Turkey.

PubMed

Bayramin, Ilhami; Basaran, Mustafa; Erpul, Günay; Canga, Mustafa R

2008-05-01

There has been increasing concern in highlands of semiarid Turkey that conversion of these systems results in excessive soil erosion, ecosystem degradation, and loss of sustainable resources. An increasing rate of land use/cover changes especially in semiarid mountainous areas has resulted in important effects on physical and ecological processes, causing many regions to undergo accelerated environmental degradation in terms of soil erosion, mass movement and reservoir sedimentation. This paper, therefore, explores the impact of land use changes on land degradation in a linkage to the soil erodibility, RUSLE-K, in Cankiri-Indagi Mountain Pass, Turkey. The characterization of soil erodibility in this ecosystem is important from the standpoint of conserving fragile ecosystems and planning management practices. Five adjacent land uses (cropland, grassland, woodland, plantation, and recreational land) were selected for this research. Analysis of variance showed that soil properties and RUSLE-K statistically changed with land use changes and soils of the recreational land and cropland were more sensitive to water erosion than those of the woodland, grassland, and plantation. This was mainly due to the significant decreases in soil organic matter (SOM) and hydraulic conductivity (HC) in those lands. Additionally, soil samples randomly collected from the depths of 0-10 cm (D1) and 10-20 cm (D2) with irregular intervals in an area of 1,200 by 4,200 m sufficiently characterized not only the spatial distribution of soil organic matter (SOM), hydraulic conductivity (HC), clay (C), silt (Si), sand (S) and silt plus very fine sand (Si + VFS) but also the spatial distribution of RUSLE-K as an algebraically estimate of these parameters together with field assessment of soil structure to assess the dynamic relationships between soil properties and land use types. In this study, in order to perform the spatial analyses, the mean sampling intervals were 43, 50, 64, 78, 85 m for woodland, plantation, grassland, recreation, and cropland with the sample numbers of 56, 79, 72, 13, and 69, respectively, resulting in an average interval of 64 m for whole study area. Although nugget effect and nugget effect-sill ratio gave an idea about the sampling design adequacy, the better results are undoubtedly likely by both equi-probable spatial sampling and random sampling representative of all land uses.

Optimal synchronization in space

NASA Astrophysics Data System (ADS)

Brede, Markus

2010-02-01

In this Rapid Communication we investigate spatially constrained networks that realize optimal synchronization properties. After arguing that spatial constraints can be imposed by limiting the amount of “wire” available to connect nodes distributed in space, we use numerical optimization methods to construct networks that realize different trade offs between optimal synchronization and spatial constraints. Over a large range of parameters such optimal networks are found to have a link length distribution characterized by power-law tails P(l)∝l-α , with exponents α increasing as the networks become more constrained in space. It is also shown that the optimal networks, which constitute a particular type of small world network, are characterized by the presence of nodes of distinctly larger than average degree around which long-distance links are centered.

Complete spatiotemporal characterization and optical transfer matrix inversion of a 420 mode fiber.

PubMed

Carpenter, Joel; Eggleton, Benjamin J; Schröder, Jochen

2016-12-01

The ability to measure a scattering medium's optical transfer matrix, the mapping between any spatial input and output, has enabled applications such as imaging to be performed through media which would otherwise be opaque due to scattering. However, the scattering of light occurs not just in space, but also in time. We complete the characterization of scatter by extending optical transfer matrix methods into the time domain, allowing any spatiotemporal input state at one end to be mapped directly to its corresponding spatiotemporal output state. We have measured the optical transfer function of a multimode fiber in its entirety; it consists of 420 modes in/out at 32768 wavelengths, the most detailed complete characterization of multimode waveguide light propagation to date, to the best of our knowledge. We then demonstrate the ability to generate any spatial/polarization state at the output of the fiber at any wavelength, as well as predict the temporal response of any spatial/polarization input state.

Assessing the spatial distribution of coral bleaching using small unmanned aerial systems

NASA Astrophysics Data System (ADS)

Levy, Joshua; Hunter, Cynthia; Lukacazyk, Trent; Franklin, Erik C.

2018-06-01

Small unmanned aerial systems (sUAS) are an affordable, effective complement to existing coral reef monitoring and assessment tools. sUAS provide repeatable low-altitude, high-resolution photogrammetry to address fundamental questions of spatial ecology and community dynamics for shallow coral reef ecosystems. Here, we qualitatively describe the use of sUAS to survey the spatial characteristics of coral cover and the distribution of coral bleaching across patch reefs in Kānéohe Bay, Hawaii, and address limitations and anticipated technology advancements within the field of UAS. Overlapping sub-decimeter low-altitude aerial reef imagery collected during the 2015 coral bleaching event was used to construct high-resolution reef image mosaics of coral bleaching responses on four Kānéohe Bay patch reefs, totaling 60,000 m2. Using sUAS imagery, we determined that paled, bleached and healthy corals on all four reefs were spatially clustered. Comparative analyses of data from sUAS imagery and in situ diver surveys found as much as 14% difference in coral cover values between survey methods, depending on the size of the reef and area surveyed. When comparing the abundance of unhealthy coral (paled and bleached) between sUAS and in situ diver surveys, we found differences in cover from 1 to 49%, depending on the depth of in situ surveys, the percent of reef area covered with sUAS surveys and patchiness of the bleaching response. This study demonstrates the effective use of sUAS surveys for assessing the spatial dynamics of coral bleaching at colony-scale resolutions across entire patch reefs and evaluates the complementarity of data from both sUAS and in situ diver surveys to more accurately characterize the spatial ecology of coral communities on reef flats and slopes.

Age-related changes in rostral basal forebrain cholinergic and GABAergic projection neurons: Relationship with spatial impairment

PubMed Central

Bañuelos, C.; LaSarge, C. L.; McQuail, J. A.; Hartman, J. J.; Gilbert, R. J.; Ormerod, B. K.; Bizon, J. L.

2013-01-01

Both cholinergic and GABAergic projections from the rostral basal forebrain have been implicated in hippocampal function and mnemonic abilities. While dysfunction of cholinergic neurons has been heavily implicated in age-related memory decline, significantly less is known regarding how age-related changes in co-distributed GABAergic projection neurons contribute to a decline in hippocampal-dependent spatial learning. In the current study, confocal stereology was used to quantify cholinergic (choline acetyltransferase (ChAT) immunopositive) neurons, GABAergic projection (glutamic decarboxylase 67 (GAD67) immunopositive) neurons, and total (NeuN immunopositive) neurons in the rostral basal forebrain of young and aged rats that were first characterized on a spatial learning task. ChAT immunopositive neurons were significantly but modestly reduced in aged rats. Although ChAT immunopositive neuron number was strongly correlated with spatial learning abilities among young rats, the reduction of ChAT immunopositive neurons was not associated with impaired spatial learning in aged rats. In contrast, the number of GAD67 immunopositive neurons was robustly and selectively elevated in aged rats that exhibited impaired spatial learning. Interestingly, the total number of rostral basal forebrain neurons was comparable in young and aged rats, regardless of their cognitive status. These data demonstrate differential effects of age on phenotypically distinct rostral basal forebrain projection neurons, and implicate dysregulated cholinergic and GABAergic septohippocampal circuitry in age-related mnemonic decline. PMID:22817834

Sequential analysis of hydrochemical data for watershed characterization.

PubMed

Thyne, Geoffrey; Güler, Cüneyt; Poeter, Eileen

2004-01-01

A methodology for characterizing the hydrogeology of watersheds using hydrochemical data that combine statistical, geochemical, and spatial techniques is presented. Surface water and ground water base flow and spring runoff samples (180 total) from a single watershed are first classified using hierarchical cluster analysis. The statistical clusters are analyzed for spatial coherence confirming that the clusters have a geological basis corresponding to topographic flowpaths and showing that the fractured rock aquifer behaves as an equivalent porous medium on the watershed scale. Then principal component analysis (PCA) is used to determine the sources of variation between parameters. PCA analysis shows that the variations within the dataset are related to variations in calcium, magnesium, SO4, and HCO3, which are derived from natural weathering reactions, and pH, NO3, and chlorine, which indicate anthropogenic impact. PHREEQC modeling is used to quantitatively describe the natural hydrochemical evolution for the watershed and aid in discrimination of samples that have an anthropogenic component. Finally, the seasonal changes in the water chemistry of individual sites were analyzed to better characterize the spatial variability of vertical hydraulic conductivity. The integrated result provides a method to characterize the hydrogeology of the watershed that fully utilizes traditional data.

Incorporating Human Movement Behavior into the Analysis of Spatially Distributed Infrastructure.

PubMed

Wu, Lihua; Leung, Henry; Jiang, Hao; Zheng, Hong; Ma, Li

2016-01-01

For the first time in human history, the majority of the world's population resides in urban areas. Therefore, city managers are faced with new challenges related to the efficiency, equity and quality of the supply of resources, such as water, food and energy. Infrastructure in a city can be viewed as service points providing resources. These service points function together as a spatially collaborative system to serve an increasing population. To study the spatial collaboration among service points, we propose a shared network according to human's collective movement and resource usage based on data usage detail records (UDRs) from the cellular network in a city in western China. This network is shown to be not scale-free, but exhibits an interesting triangular property governed by two types of nodes with very different link patterns. Surprisingly, this feature is consistent with the urban-rural dualistic context of the city. Another feature of the shared network is that it consists of several spatially separated communities that characterize local people's active zones but do not completely overlap with administrative areas. According to these features, we propose the incorporation of human movement into infrastructure classification. The presence of well-defined spatially separated clusters confirms the effectiveness of this approach. In this paper, our findings reveal the spatial structure inside a city, and the proposed approach provides a new perspective on integrating human movement into the study of a spatially distributed system.

Motivational valence alters memory formation without altering exploration of a real-life spatial environment.

PubMed

Chiew, Kimberly S; Hashemi, Jordan; Gans, Lee K; Lerebours, Laura; Clement, Nathaniel J; Vu, Mai-Anh T; Sapiro, Guillermo; Heller, Nicole E; Adcock, R Alison

2018-01-01

Volitional exploration and learning are key to adaptive behavior, yet their characterization remains a complex problem for cognitive science. Exploration has been posited as a mechanism by which motivation promotes memory, but this relationship is not well-understood, in part because novel stimuli that motivate exploration also reliably elicit changes in neuromodulatory brain systems that directly alter memory formation, via effects on neural plasticity. To deconfound interrelationships between motivation, exploration, and memory formation we manipulated motivational state prior to entering a spatial context, measured exploratory responses to the context and novel stimuli within it, and then examined motivation and exploration as predictors of memory outcomes. To elicit spontaneous exploration, we used the physical space of an art exhibit with affectively rich content; we expected motivated exploration and memory to reflect multiple factors, including not only motivational valence, but also individual differences. Motivation was manipulated via an introductory statement framing exhibit themes in terms of Promotion- or Prevention-oriented goals. Participants explored the exhibit while being tracked by video. They returned 24 hours later for recall and spatial memory tests, followed by measures of motivation, personality, and relevant attitude variables. Promotion and Prevention condition participants did not differ in terms of group-level exploration time or memory metrics, suggesting similar motivation to explore under both framing contexts. However, exploratory behavior and memory outcomes were significantly more closely related under Promotion than Prevention, indicating that Prevention framing disrupted expected depth-of-encoding effects. Additionally, while trait measures predicted exploration similarly across framing conditions, traits interacted with motivational framing context and facial affect to predict memory outcomes. This novel characterization of motivated learning implies that dissociable behavioral and biological mechanisms, here varying as a function of valence, contribute to memory outcomes in complex, real-life environments.

Motivational valence alters memory formation without altering exploration of a real-life spatial environment

PubMed Central

Hashemi, Jordan; Gans, Lee K.; Lerebours, Laura; Clement, Nathaniel J.; Vu, Mai-Anh T.; Sapiro, Guillermo; Heller, Nicole E.; Adcock, R. Alison

2018-01-01

Volitional exploration and learning are key to adaptive behavior, yet their characterization remains a complex problem for cognitive science. Exploration has been posited as a mechanism by which motivation promotes memory, but this relationship is not well-understood, in part because novel stimuli that motivate exploration also reliably elicit changes in neuromodulatory brain systems that directly alter memory formation, via effects on neural plasticity. To deconfound interrelationships between motivation, exploration, and memory formation we manipulated motivational state prior to entering a spatial context, measured exploratory responses to the context and novel stimuli within it, and then examined motivation and exploration as predictors of memory outcomes. To elicit spontaneous exploration, we used the physical space of an art exhibit with affectively rich content; we expected motivated exploration and memory to reflect multiple factors, including not only motivational valence, but also individual differences. Motivation was manipulated via an introductory statement framing exhibit themes in terms of Promotion- or Prevention-oriented goals. Participants explored the exhibit while being tracked by video. They returned 24 hours later for recall and spatial memory tests, followed by measures of motivation, personality, and relevant attitude variables. Promotion and Prevention condition participants did not differ in terms of group-level exploration time or memory metrics, suggesting similar motivation to explore under both framing contexts. However, exploratory behavior and memory outcomes were significantly more closely related under Promotion than Prevention, indicating that Prevention framing disrupted expected depth-of-encoding effects. Additionally, while trait measures predicted exploration similarly across framing conditions, traits interacted with motivational framing context and facial affect to predict memory outcomes. This novel characterization of motivated learning implies that dissociable behavioral and biological mechanisms, here varying as a function of valence, contribute to memory outcomes in complex, real-life environments. PMID:29558526

Performance analysis of improved methodology for incorporation of spatial/spectral variability in synthetic hyperspectral imagery

NASA Astrophysics Data System (ADS)

Scanlan, Neil W.; Schott, John R.; Brown, Scott D.

2004-01-01

Synthetic imagery has traditionally been used to support sensor design by enabling design engineers to pre-evaluate image products during the design and development stages. Increasingly exploitation analysts are looking to synthetic imagery as a way to develop and test exploitation algorithms before image data are available from new sensors. Even when sensors are available, synthetic imagery can significantly aid in algorithm development by providing a wide range of "ground truthed" images with varying illumination, atmospheric, viewing and scene conditions. One limitation of synthetic data is that the background variability is often too bland. It does not exhibit the spatial and spectral variability present in real data. In this work, four fundamentally different texture modeling algorithms will first be implemented as necessary into the Digital Imaging and Remote Sensing Image Generation (DIRSIG) model environment. Two of the models to be tested are variants of a statistical Z-Score selection model, while the remaining two involve a texture synthesis and a spectral end-member fractional abundance map approach, respectively. A detailed comparative performance analysis of each model will then be carried out on several texturally significant regions of the resultant synthetic hyperspectral imagery. The quantitative assessment of each model will utilize a set of three peformance metrics that have been derived from spatial Gray Level Co-Occurrence Matrix (GLCM) analysis, hyperspectral Signal-to-Clutter Ratio (SCR) measures, and a new concept termed the Spectral Co-Occurrence Matrix (SCM) metric which permits the simultaneous measurement of spatial and spectral texture. Previous research efforts on the validation and performance analysis of texture characterization models have been largely qualitative in nature based on conducting visual inspections of synthetic textures in order to judge the degree of similarity to the original sample texture imagery. The quantitative measures used in this study will in combination attempt to determine which texture characterization models best capture the correct statistical and radiometric attributes of the corresponding real image textures in both the spatial and spectral domains. The motivation for this work is to refine our understanding of the complexities of texture phenomena so that an optimal texture characterization model that can accurately account for these complexities can be eventually implemented into a synthetic image generation (SIG) model. Further, conclusions will be drawn regarding which of the candidate texture models are able to achieve realistic levels of spatial and spectral clutter, thereby permitting more effective and robust testing of hyperspectral algorithms in synthetic imagery.

Performance analysis of improved methodology for incorporation of spatial/spectral variability in synthetic hyperspectral imagery

NASA Astrophysics Data System (ADS)

Scanlan, Neil W.; Schott, John R.; Brown, Scott D.

2003-12-01

Synthetic imagery has traditionally been used to support sensor design by enabling design engineers to pre-evaluate image products during the design and development stages. Increasingly exploitation analysts are looking to synthetic imagery as a way to develop and test exploitation algorithms before image data are available from new sensors. Even when sensors are available, synthetic imagery can significantly aid in algorithm development by providing a wide range of "ground truthed" images with varying illumination, atmospheric, viewing and scene conditions. One limitation of synthetic data is that the background variability is often too bland. It does not exhibit the spatial and spectral variability present in real data. In this work, four fundamentally different texture modeling algorithms will first be implemented as necessary into the Digital Imaging and Remote Sensing Image Generation (DIRSIG) model environment. Two of the models to be tested are variants of a statistical Z-Score selection model, while the remaining two involve a texture synthesis and a spectral end-member fractional abundance map approach, respectively. A detailed comparative performance analysis of each model will then be carried out on several texturally significant regions of the resultant synthetic hyperspectral imagery. The quantitative assessment of each model will utilize a set of three peformance metrics that have been derived from spatial Gray Level Co-Occurrence Matrix (GLCM) analysis, hyperspectral Signal-to-Clutter Ratio (SCR) measures, and a new concept termed the Spectral Co-Occurrence Matrix (SCM) metric which permits the simultaneous measurement of spatial and spectral texture. Previous research efforts on the validation and performance analysis of texture characterization models have been largely qualitative in nature based on conducting visual inspections of synthetic textures in order to judge the degree of similarity to the original sample texture imagery. The quantitative measures used in this study will in combination attempt to determine which texture characterization models best capture the correct statistical and radiometric attributes of the corresponding real image textures in both the spatial and spectral domains. The motivation for this work is to refine our understanding of the complexities of texture phenomena so that an optimal texture characterization model that can accurately account for these complexities can be eventually implemented into a synthetic image generation (SIG) model. Further, conclusions will be drawn regarding which of the candidate texture models are able to achieve realistic levels of spatial and spectral clutter, thereby permitting more effective and robust testing of hyperspectral algorithms in synthetic imagery.

Spatial Statistical Network Models for Stream and River Temperature in the Chesapeake Bay Watershed, USA

EPA Science Inventory

Regional temperature models are needed for characterizing and mapping stream thermal regimes, establishing reference conditions, predicting future impacts and identifying critical thermal refugia. Spatial statistical models have been developed to improve regression modeling techn...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kennedy, R.P.; Kincaid, R.H.; Short, S.A.

This report presents the results of part of a two-task study on the engineering characterization of earthquake ground motion for nuclear power plant design. Task I of the study, which is presented in NUREG/CR-3805, Vol. 1, developed a basis for selecting design response spectra taking into account the characteristics of free-field ground motion found to be significant in causing structural damage. Task II incorporates additional considerations of effects of spatial variations of ground motions and soil-structure interaction on foundation motions and structural response. The results of Task II are presented in four parts: (1) effects of ground motion characteristics onmore » structural response of a typical PWR reactor building with localized nonlinearities and soil-structure interaction effects; (2) empirical data on spatial variations of earthquake ground motion; (3) soil-structure interaction effects on structural response; and (4) summary of conclusions and recommendations based on Tasks I and II studies. This report presents the results of the first part of Task II. The results of the other parts will be presented in NUREG/CR-3805, Vols. 3 to 5.« less

Differential Effects of Alcohol on Working Memory: Distinguishing Multiple Processes

PubMed Central

Saults, J. Scott; Cowan, Nelson; Sher, Kenneth J.; Moreno, Matthew V.

2008-01-01

We assessed effects of alcohol consumption on different types of working memory (WM) tasks in an attempt to characterize the nature of alcohol effects on cognition. The WM tasks varied in two properties of materials to be retained in a two-stimulus comparison procedure. Conditions included (1) spatial arrays of colors, (2) temporal sequences of colors, (3) spatial arrays of spoken digits, and (4) temporal sequences of spoken digits. Alcohol consumption impaired memory for auditory and visual sequences, but not memory for simultaneous arrays of auditory or visual stimuli. These results suggest that processes needed to encode and maintain stimulus sequences, such as rehearsal, are more sensitive to alcohol intoxication than other WM mechanisms needed to maintain multiple concurrent items, such as focusing attention on them. These findings help to resolve disparate findings from prior research into alcohol’s effect on WM and on divided attention. The results suggest that moderate doses of alcohol impair WM by affecting certain mnemonic strategies and executive processes rather than by shrinking the basic holding capacity of WM. PMID:18179311

Hysteresis in Carbon Nanotube Transistors: Measurement and Analysis of Trap Density, Energy Level, and Spatial Distribution.

PubMed

Park, Rebecca Sejung; Shulaker, Max Marcel; Hills, Gage; Suriyasena Liyanage, Luckshitha; Lee, Seunghyun; Tang, Alvin; Mitra, Subhasish; Wong, H-S Philip

2016-04-26

We present a measurement technique, which we call the Pulsed Time-Domain Measurement, for characterizing hysteresis in carbon nanotube field-effect transistors, and demonstrate its applicability for a broad range of 1D and 2D nanomaterials beyond carbon nanotubes. The Pulsed Time-Domain Measurement enables the quantification (density, energy level, and spatial distribution) of charged traps responsible for hysteresis. A physics-based model of the charge trapping process for a carbon nanotube field-effect transistor is presented and experimentally validated using the Pulsed Time-Domain Measurement. Leveraging this model, we discover a source of traps (surface traps) unique to devices with low-dimensional channels such as carbon nanotubes and nanowires (beyond interface traps which exist in today's silicon field-effect transistors). The different charge trapping mechanisms for interface traps and surface traps are studied based on their temperature dependencies. Through these advances, we are able to quantify the interface trap density for carbon nanotube field-effect transistors (∼3 × 10(13) cm(-2) eV(-1) near midgap), and compare this against a range of previously studied dielectric/semiconductor interfaces.

Differential effects of alcohol on working memory: distinguishing multiple processes.

PubMed

Saults, J Scott; Cowan, Nelson; Sher, Kenneth J; Moreno, Matthew V

2007-12-01

The authors assessed effects of alcohol consumption on different types of working memory (WM) tasks in an attempt to characterize the nature of alcohol effects on cognition. The WM tasks varied in 2 properties of materials to be retained in a 2-stimulus comparison procedure. Conditions included (a) spatial arrays of colors, (b) temporal sequences of colors, (c) spatial arrays of spoken digits, and (d) temporal sequences of spoken digits. Alcohol consumption impaired memory for auditory and visual sequences but not memory for simultaneous arrays of auditory or visual stimuli. These results suggest that processes needed to encode and maintain stimulus sequences, such as rehearsal, are more sensitive to alcohol intoxication than other WM mechanisms needed to maintain multiple concurrent items, such as focusing attention on them. These findings help to resolve disparate findings from prior research on alcohol's effect on WM and on divided attention. The results suggest that moderate doses of alcohol impair WM by affecting certain mnemonic strategies and executive processes rather than by shrinking the basic holding capacity of WM. (c) 2008 APA, all rights reserved.

A Comparison of Foliage Profiles in the Sierra National Forest Obtained with a Full-Waveform Under-Canopy EVI Lidar System with the Foliage Profiles Obtained with an Airborne Full-Waveform LVIS Lidar System

NASA Technical Reports Server (NTRS)

Zhao, Feng; Yang, Xiaoyuan; Strahler, Alan H.; Schaaf, Crystal L.; Yao, Tian; Wang, Zhuosen; Roman, Miguel O.; Woodcock, Curtis E.; Ni-Meister, Wenge; Jupp, David L. B.;

Spatial characterization of riparian buffer effects on sediment loads from watershed systems.

PubMed

Momm, Henrique G; Bingner, Ronald L; Yuan, Yongping; Locke, Martin A; Wells, Robert R

2014-09-01

Understanding all watershed systems and their interactions is a complex, but critical, undertaking when developing practices designed to reduce topsoil loss and chemical/nutrient transport from agricultural fields. The presence of riparian buffer vegetation in agricultural landscapes can modify the characteristics of overland flow, promoting sediment deposition and nutrient filtering. Watershed simulation tools, such as the USDA-Annualized Agricultural Non-Point Source (AnnAGNPS) pollution model, typically require detailed information for each riparian buffer zone throughout the watershed describing the location, width, vegetation type, topography, and possible presence of concentrated flow paths through the riparian buffer zone. Research was conducted to develop GIS-based technology designed to spatially characterize riparian buffers and to estimate buffer efficiency in reducing sediment loads in a semiautomated fashion at watershed scale. The methodology combines modeling technology at different scales, at individual concentrated flow paths passing through the riparian zone, and at watershed scales. At the concentrated flow path scale, vegetative filter strip models are applied to estimate the sediment-trapping efficiency for each individual flow path, which are aggregated based on the watershed subdivision and used in the determination of the overall impact of the riparian vegetation at the watershed scale. This GIS-based technology is combined with AnnAGNPS to demonstrate the effect of riparian vegetation on sediment loadings from sheet and rill and ephemeral gully sources. The effects of variability in basic input parameters used to characterize riparian buffers, onto generated outputs at field scale (sediment trapping efficiency) and at watershed scale (sediment loadings from different sources) were evaluated and quantified. The AnnAGNPS riparian buffer component represents an important step in understanding and accounting for the effect of riparian vegetation, existing and/or managed, in reducing sediment loads at the watershed scale. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Using informative priors in facies inversion: The case of C-ISR method

NASA Astrophysics Data System (ADS)

Valakas, G.; Modis, K.

2016-08-01

Inverse problems involving the characterization of hydraulic properties of groundwater flow systems by conditioning on observations of the state variables are mathematically ill-posed because they have multiple solutions and are sensitive to small changes in the data. In the framework of McMC methods for nonlinear optimization and under an iterative spatial resampling transition kernel, we present an algorithm for narrowing the prior and thus producing improved proposal realizations. To achieve this goal, we cosimulate the facies distribution conditionally to facies observations and normal scores transformed hydrologic response measurements, assuming a linear coregionalization model. The approach works by creating an importance sampling effect that steers the process to selected areas of the prior. The effectiveness of our approach is demonstrated by an example application on a synthetic underdetermined inverse problem in aquifer characterization.

A Modeling Framework for Inference of Surface Emissions Using Mobile Observations

NASA Astrophysics Data System (ADS)

Fasoli, B.; Mitchell, L.; Crosman, E.; Mendoza, D. L.; Lin, J. C.

2016-12-01

Our ability to quantify surface emissions depends on the precision of observations and the spatial density of measurement networks. Mobile measurement techniques offer a cost effective strategy for quantifying atmospheric conditions over space without requiring a dense network of in-situ sites. However, interpretation of these data and inversion of dispersed measurements to estimate surface emissions can be difficult. We introduce a framework using the Stochastic Time-Inverted Lagrangian Transport (STILT) model that assimilates both spatially resolved observations and an emissions inventory to better estimate surface fluxes. Salt Lake City is a unique laboratory for the study of urban carbon emissions. It is the only U.S. city that utilizes light-rail trains to continuously measure high frequency carbon dioxide (CO2) and methane (CH4); it is home to one of the longest and most spatially resolved high precision CO2 measurement networks (air.utah.edu); and it is one of four cities in the world for which the Hestia anthropogenic emissions inventory has been produced which characterizes CO2 emissions at the scale of individual buildings and roadways. Using these data and modeling resources, we evaluate spatially resolved CO2 measurements and transported CO2 emissions on hourly timescales at a dense spatial resolution across Salt Lake City.

Characterization of a neutron imaging setup at the INES facility

NASA Astrophysics Data System (ADS)

Durisi, E. A.; Visca, L.; Albertin, F.; Brancaccio, R.; Corsi, J.; Dughera, G.; Ferrarese, W.; Giovagnoli, A.; Grassi, N.; Grazzi, F.; Lo Giudice, A.; Mila, G.; Nervo, M.; Pastrone, N.; Prino, F.; Ramello, L.; Re, A.; Romero, A.; Sacchi, R.; Salvemini, F.; Scherillo, A.; Staiano, A.

2013-10-01

The Italian Neutron Experimental Station (INES) located at the ISIS pulsed neutron source (Didcot, United Kingdom) provides a thermal neutron beam mainly used for diffraction analysis. A neutron transmission imaging system was also developed for beam monitoring and for aligning the sample under investigation. Although the time-of-flight neutron diffraction is a consolidated technique, the neutron imaging setup is not yet completely characterized and optimized. In this paper the performance for neutron radiography and tomography at INES of two scintillator screens read out by two different commercial CCD cameras is compared in terms of linearity, signal-to-noise ratio, effective dynamic range and spatial resolution. In addition, the results of neutron radiographies and a tomography of metal alloy test structures are presented to better characterize the INES imaging capabilities of metal artifacts in the cultural heritage field.

Influence of Lumbar Muscle Fatigue on Trunk Adaptations during Sudden External Perturbations

PubMed Central

Abboud, Jacques; Nougarou, François; Lardon, Arnaud; Dugas, Claude; Descarreaux, Martin

2016-01-01

Introduction: When the spine is subjected to perturbations, neuromuscular responses such as reflex muscle contractions contribute to the overall balance control and spinal stabilization mechanisms. These responses are influenced by muscle fatigue, which has been shown to trigger changes in muscle recruitment patterns. Neuromuscular adaptations, e.g., attenuation of reflex activation and/or postural oscillations following repeated unexpected external perturbations, have also been described. However, the characterization of these adaptations still remains unclear. Using high-density electromyography (EMG) may help understand how the nervous system chooses to deal with an unknown perturbation in different physiological and/or mechanical perturbation environments. Aim: To characterize trunk neuromuscular adaptations following repeated sudden external perturbations after a back muscle fatigue task using high-density EMG. Methods: Twenty-five healthy participants experienced a series of 15 sudden external perturbations before and after back muscle fatigue. Erector spinae muscle activity was recorded using high-density EMG. Trunk kinematics during perturbation trials were collected using a 3-D motion analysis system. A two-way repeated measure ANOVA was conducted to assess: (1) the adaptation effect across trials; (2) the fatigue effect; and (3) the interaction effect (fatigue × adaptation) for the baseline activity, the reflex latency, the reflex peak and trunk kinematic variables (flexion angle, velocity and time to peak velocity). Muscle activity spatial distribution before and following the fatigue task was also compared using t-tests for dependent samples. Results: An attenuation of muscle reflex peak was observed across perturbation trials before the fatigue task, but not after. The spatial distribution of muscle activity was significantly higher before the fatigue task compared to post-fatigue trials. Baseline activity showed a trend to higher values after muscle fatigue, as well as reduction through perturbation trials. Main effects of fatigue and adaptation were found for time to peak velocity. No adaptation nor fatigue effect were identified for reflex latency, flexion angle or trunk velocity. Conclusion: The results show that muscle fatigue leads to reduced spatial distribution of back muscle activity and suggest a limited ability to use across-trial redundancy to adapt EMG reflex peak and optimize spinal stabilization using retroactive control. PMID:27895569

Spatial averaging of a dissipative particle dynamics model for active suspensions

NASA Astrophysics Data System (ADS)

Panchenko, Alexander; Hinz, Denis F.; Fried, Eliot

2018-03-01

Starting from a fine-scale dissipative particle dynamics (DPD) model of self-motile point particles, we derive meso-scale continuum equations by applying a spatial averaging version of the Irving-Kirkwood-Noll procedure. Since the method does not rely on kinetic theory, the derivation is valid for highly concentrated particle systems. Spatial averaging yields stochastic continuum equations similar to those of Toner and Tu. However, our theory also involves a constitutive equation for the average fluctuation force. According to this equation, both the strength and the probability distribution vary with time and position through the effective mass density. The statistics of the fluctuation force also depend on the fine scale dissipative force equation, the physical temperature, and two additional parameters which characterize fluctuation strengths. Although the self-propulsion force entering our DPD model contains no explicit mechanism for aligning the velocities of neighboring particles, our averaged coarse-scale equations include the commonly encountered cubically nonlinear (internal) body force density.

Direct Electrical Stimulation of the Human Entorhinal Region and Hippocampus Impairs Memory.

PubMed

Jacobs, Joshua; Miller, Jonathan; Lee, Sang Ah; Coffey, Tom; Watrous, Andrew J; Sperling, Michael R; Sharan, Ashwini; Worrell, Gregory; Berry, Brent; Lega, Bradley; Jobst, Barbara C; Davis, Kathryn; Gross, Robert E; Sheth, Sameer A; Ezzyat, Youssef; Das, Sandhitsu R; Stein, Joel; Gorniak, Richard; Kahana, Michael J; Rizzuto, Daniel S

2016-12-07

Deep brain stimulation (DBS) has shown promise for treating a range of brain disorders and neurological conditions. One recent study showed that DBS in the entorhinal region improved the accuracy of human spatial memory. Based on this line of work, we performed a series of experiments to more fully characterize the effects of DBS in the medial temporal lobe on human memory. Neurosurgical patients with implanted electrodes performed spatial and verbal-episodic memory tasks. During the encoding periods of both tasks, subjects received electrical stimulation at 50 Hz. In contrast to earlier work, electrical stimulation impaired memory performance significantly in both spatial and verbal tasks. Stimulation in both the entorhinal region and hippocampus caused decreased memory performance. These findings indicate that the entorhinal region and hippocampus are causally involved in human memory and suggest that refined methods are needed to use DBS in these regions to improve memory. Copyright © 2016 Elsevier Inc. All rights reserved.

The Berkeley Atmospheric CO2 Observation Network (BEACON): Measuring Greenhouse Gases and Criteria Pollutants within the Urban Dome

NASA Astrophysics Data System (ADS)

Teige, V. E.; Weichsel, K.; Hooker, A.; Wooldridge, P. J.; Cohen, R. C.

2012-12-01

Efforts to curb greenhouse gas emissions, while global in their impacts, often focus on local and regional scales for execution and are dependent on the actions of communities and individuals. Evaluating the effectiveness of local policies requires observations with much higher spatial resolution than are currently available---kilometer scale. The Berkeley Atmospheric CO2 Observation Network (BEACON):, launched at the end of 2011, aims to provide measurements of urban-scale concentrations of CO2, temperature, pressure, relative humidity, O3, CO, and NO2 with sufficient spatial and temporal resolution to characterize the sources of CO2 within cities. Our initial deployment in Oakland, California uses ~40 sensor packages at a roughly 2 km spacing throughout the city. We will present an initial analysis of the vertical gradients and other spatial patterns observed to date.

Accounting for Limited Detection Efficiency and Localization Precision in Cluster Analysis in Single Molecule Localization Microscopy

PubMed Central

Shivanandan, Arun; Unnikrishnan, Jayakrishnan; Radenovic, Aleksandra

2015-01-01

Single Molecule Localization Microscopy techniques like PhotoActivated Localization Microscopy, with their sub-diffraction limit spatial resolution, have been popularly used to characterize the spatial organization of membrane proteins, by means of quantitative cluster analysis. However, such quantitative studies remain challenged by the techniques’ inherent sources of errors such as a limited detection efficiency of less than 60%, due to incomplete photo-conversion, and a limited localization precision in the range of 10 – 30nm, varying across the detected molecules, mainly depending on the number of photons collected from each. We provide analytical methods to estimate the effect of these errors in cluster analysis and to correct for them. These methods, based on the Ripley’s L(r) – r or Pair Correlation Function popularly used by the community, can facilitate potentially breakthrough results in quantitative biology by providing a more accurate and precise quantification of protein spatial organization. PMID:25794150

Analysis of passive surface-wave noise in surface microseismic data and its implications

USGS Publications Warehouse

Forghani-Arani, F.; Willis, M.; Haines, S.; Batzle, M.; Davidson, M.

2011-01-01

Tight gas reservoirs are projected to be a major portion of future energy resources. Because of their low permeability, hydraulic fracturing of these reservoirs is required to improve the permeability and reservoir productivity. Passive seismic monitoring is one of the few tools that can be used to characterize the changes in the reservoir due to hydraulic fracturing. Although the majority of the studies monitoring hydraulic fracturing exploit down hole microseismic data, surface microseismic monitoring is receiving increased attention because it is potentially much less expensive to acquire. Due to a broader receiver aperture and spatial coverage, surface microseismic data may be more advantageous than down hole microseismic data. The effectiveness of this monitoring technique, however, is strongly dependent on the signal-to-noise ratio of the data. Cultural and ambient noise can mask parts of the waveform that carry information about the subsurface, thereby decreasing the effectiveness of surface microseismic analysis in identifying and locating the microseismic events. Hence, time and spatially varying suppression of the surface-wave noise ground roll is a critical step in surface microseismic monitoring. Here, we study a surface passive dataset that was acquired over a Barnett Shale Formation reservoir during two weeks of hydraulic fracturing, in order to characterize and suppress the surface noise in this data. We apply techniques to identify the characteristics of the passive ground roll. Exploiting those characteristics, we can apply effective noise suppression techniques to the passive data. ?? 2011 Society of Exploration Geophysicists.

Using GPS TEC measurements to probe ionospheric spatial spectra at mid-latitudes

NASA Astrophysics Data System (ADS)

Lay, E. H.; Parker, P. A.; Light, M. E.; Carrano, C. S.; Debchoudhury, S.; Haaser, R. A.

2017-12-01

The physics of how random ionospheric structure causes signal degradation is well understood as weak forward scattering through an effective diffraction grating created by plasma irregularities in the ionosphere. However, the spatial scale spectrum of those irregularities required for input into scintillation models and models of traveling ionospheric disturbances is poorly characterized, particularly at the kilometer to tens of kilometer scale lengths important for very-high-frequency (VHF) scintillation prediction. Furthermore, the majority of characterization studies have been performed in low-latitude or high-latitude regions where geomagnetic activity dominates the physical processes. At mid-latitudes, tropospheric and geomagnetic phenomena compete in disturbing the ionosphere, and it is not well understood how these multiple sources affect the drivers that influence the spatial spectrum. In this study, we are interested in mid-latitude electron density irregularities on the order of 10s of kilometers that would affect VHF signals. Data from the GPS networks Japan GEONET and the Plate Boundary Observatory (PBO, UNAVCO) in the western United States were analyzed for this study. Japan GEONET is a dense network of GPS receivers (station spacing of tens of km), with fairly evenly spaced positions over all of Japan. The PBO, on the other hand, has several pockets of extremely dense coverage (station spacing within a few km), but is less dense on average. We analyze a day with a large solar storm (2015/03/17, St. Patrick's Day Storm) to allow high scintillation potential at mid-latitudes, a day with low geomagnetic activity and low thunderstorm activity (2016/01/31), and a day with low geomagnetic activity and high thunderstorm activity (2015/08/02). We then perform two-dimensional spatial analyses on the TEC data from these two networks on scale lengths of 20 to 200 km to infer the spatial scale spectra.

Beyond local effective material properties for metamaterials

NASA Astrophysics Data System (ADS)

Mnasri, K.; Khrabustovskyi, A.; Stohrer, C.; Plum, M.; Rockstuhl, C.

2018-02-01

To discuss the properties of metamaterials on physical grounds and to consider them in applications, effective material parameters are usually introduced and assigned to a given metamaterial. In most cases, only weak spatial dispersion is considered. It allows to assign local material properties, e.g., a permittivity and a permeability. However, this turned out to be insufficient. To solve this problem, we study here the effective properties of metamaterials with constitutive relations beyond a local response and take strong spatial dispersion into account. This research requires two contributions. First, bulk properties in terms of eigenmodes need to be studied. We particularly investigate the isofrequency surfaces of their dispersion relation are investigated and compared to those of an actual metamaterial. The significant improvement to effectively describe it provides evidence for the necessity to use nonlocal material laws in the effective description of metamaterials. Second, to be able to capitalize on such constitutive relations, also interface conditions need to be known. They are derived in this contribution for our form of the nonlocality using a generalized (weak) formulation of Maxwell's equations. Based on such interface conditions, Fresnel expressions are obtained that predict the amplitude of the reflected and transmitted plane wave upon illuminating a slab of such a nonlocal metamaterial. This all together offers the necessary means for the in-depth analysis of metamaterials characterized by strong spatial dispersion. The general formulation we choose here renders our approach applicable to a wide class of metamaterials.

Optimized spatial priorities for biodiversity conservation in China: a systematic conservation planning perspective.

PubMed

Wu, Ruidong; Long, Yongcheng; Malanson, George P; Garber, Paul A; Zhang, Shuang; Li, Diqiang; Zhao, Peng; Wang, Longzhu; Duo, Hairui

2014-01-01

By addressing several key features overlooked in previous studies, i.e. human disturbance, integration of ecosystem- and species-level conservation features, and principles of complementarity and representativeness, we present the first national-scale systematic conservation planning for China to determine the optimized spatial priorities for biodiversity conservation. We compiled a spatial database on the distributions of ecosystem- and species-level conservation features, and modeled a human disturbance index (HDI) by aggregating information using several socioeconomic proxies. We ran Marxan with two scenarios (HDI-ignored and HDI-considered) to investigate the effects of human disturbance, and explored the geographic patterns of the optimized spatial conservation priorities. Compared to when HDI was ignored, the HDI-considered scenario resulted in (1) a marked reduction (∼9%) in the total HDI score and a slight increase (∼7%) in the total area of the portfolio of priority units, (2) a significant increase (∼43%) in the total irreplaceable area and (3) more irreplaceable units being identified in almost all environmental zones and highly-disturbed provinces. Thus the inclusion of human disturbance is essential for cost-effective priority-setting. Attention should be targeted to the areas that are characterized as moderately-disturbed, <2,000 m in altitude, and/or intermediately- to extremely-rugged in terrain to identify potentially important regions for implementing cost-effective conservation. We delineated 23 primary large-scale priority areas that are significant for conserving China's biodiversity, but those isolated priority units in disturbed regions are in more urgent need of conservation actions so as to prevent immediate and severe biodiversity loss. This study presents a spatially optimized national-scale portfolio of conservation priorities--effectively representing the overall biodiversity of China while minimizing conflicts with economic development. Our results offer critical insights for current conservation and strategic land-use planning in China. The approach is transferable and easy to implement by end-users, and applicable for national- and local-scale systematic conservation prioritization practices.

Optimized Spatial Priorities for Biodiversity Conservation in China: A Systematic Conservation Planning Perspective

PubMed Central

Wu, Ruidong; Long, Yongcheng; Malanson, George P.; Garber, Paul A.; Zhang, Shuang; Li, Diqiang; Zhao, Peng; Wang, Longzhu; Duo, Hairui

2014-01-01

By addressing several key features overlooked in previous studies, i.e. human disturbance, integration of ecosystem- and species-level conservation features, and principles of complementarity and representativeness, we present the first national-scale systematic conservation planning for China to determine the optimized spatial priorities for biodiversity conservation. We compiled a spatial database on the distributions of ecosystem- and species-level conservation features, and modeled a human disturbance index (HDI) by aggregating information using several socioeconomic proxies. We ran Marxan with two scenarios (HDI-ignored and HDI-considered) to investigate the effects of human disturbance, and explored the geographic patterns of the optimized spatial conservation priorities. Compared to when HDI was ignored, the HDI-considered scenario resulted in (1) a marked reduction (∼9%) in the total HDI score and a slight increase (∼7%) in the total area of the portfolio of priority units, (2) a significant increase (∼43%) in the total irreplaceable area and (3) more irreplaceable units being identified in almost all environmental zones and highly-disturbed provinces. Thus the inclusion of human disturbance is essential for cost-effective priority-setting. Attention should be targeted to the areas that are characterized as moderately-disturbed, <2,000 m in altitude, and/or intermediately- to extremely-rugged in terrain to identify potentially important regions for implementing cost-effective conservation. We delineated 23 primary large-scale priority areas that are significant for conserving China's biodiversity, but those isolated priority units in disturbed regions are in more urgent need of conservation actions so as to prevent immediate and severe biodiversity loss. This study presents a spatially optimized national-scale portfolio of conservation priorities – effectively representing the overall biodiversity of China while minimizing conflicts with economic development. Our results offer critical insights for current conservation and strategic land-use planning in China. The approach is transferable and easy to implement by end-users, and applicable for national- and local-scale systematic conservation prioritization practices. PMID:25072933

Applying spatial analysis techniques to assess the suitability of multipurpose uses of spring water in the Jiaosi Hot Spring Region, Taiwan.

PubMed

Jang, Cheng-Shin; Huang, Han-Chen

2017-07-01

The Jiaosi Hot Spring Region is one of the most famous tourism destinations in Taiwan. The spring water is processed for various uses, including irrigation, aquaculture, swimming, bathing, foot spas, and recreational tourism. Moreover, the multipurpose uses of spring water can be dictated by the temperature of the water. To evaluate the suitability of spring water for these various uses, this study spatially characterized the spring water temperatures of the Jiaosi Hot Spring Region by integrating ordinary kriging (OK), sequential Gaussian simulation (SGS), and Geographic information system (GIS). First, variogram analyses were used to determine the spatial variability of spring water temperatures. Next, OK and SGS were adopted to model the spatial uncertainty and distributions of the spring water temperatures. Finally, the land use (i.e., agriculture, dwelling, public land, and recreation) was determined using GIS and combined with the estimated distributions of the spring water temperatures. A suitable development strategy for the multipurpose uses of spring water is proposed according to the integration of the land use and spring water temperatures. The study results indicate that the integration of OK, SGS, and GIS is capable of characterizing spring water temperatures and the suitability of multipurpose uses of spring water. SGS realizations are more robust than OK estimates for characterizing spring water temperatures compared to observed data. Furthermore, current land use is almost ideal in the Jiaosi Hot Spring Region according to the estimated spatial pattern of spring water temperatures.

Geotechnical parameter spatial distribution stochastic analysis based on multi-precision information assimilation

NASA Astrophysics Data System (ADS)

Wang, C.; Rubin, Y.

2014-12-01

Spatial distribution of important geotechnical parameter named compression modulus Es contributes considerably to the understanding of the underlying geological processes and the adequate assessment of the Es mechanics effects for differential settlement of large continuous structure foundation. These analyses should be derived using an assimilating approach that combines in-situ static cone penetration test (CPT) with borehole experiments. To achieve such a task, the Es distribution of stratum of silty clay in region A of China Expo Center (Shanghai) is studied using the Bayesian-maximum entropy method. This method integrates rigorously and efficiently multi-precision of different geotechnical investigations and sources of uncertainty. Single CPT samplings were modeled as a rational probability density curve by maximum entropy theory. Spatial prior multivariate probability density function (PDF) and likelihood PDF of the CPT positions were built by borehole experiments and the potential value of the prediction point, then, preceding numerical integration on the CPT probability density curves, the posterior probability density curve of the prediction point would be calculated by the Bayesian reverse interpolation framework. The results were compared between Gaussian Sequential Stochastic Simulation and Bayesian methods. The differences were also discussed between single CPT samplings of normal distribution and simulated probability density curve based on maximum entropy theory. It is shown that the study of Es spatial distributions can be improved by properly incorporating CPT sampling variation into interpolation process, whereas more informative estimations are generated by considering CPT Uncertainty for the estimation points. Calculation illustrates the significance of stochastic Es characterization in a stratum, and identifies limitations associated with inadequate geostatistical interpolation techniques. This characterization results will provide a multi-precision information assimilation method of other geotechnical parameters.

Brain resting-state networks in adolescents with high-functioning autism: Analysis of spatial connectivity and temporal neurodynamics.

PubMed

Bernas, Antoine; Barendse, Evelien M; Aldenkamp, Albert P; Backes, Walter H; Hofman, Paul A M; Hendriks, Marc P H; Kessels, Roy P C; Willems, Frans M J; de With, Peter H N; Zinger, Svitlana; Jansen, Jacobus F A

2018-02-01

Autism spectrum disorder (ASD) is mainly characterized by functional and communication impairments as well as restrictive and repetitive behavior. The leading hypothesis for the neural basis of autism postulates globally abnormal brain connectivity, which can be assessed using functional magnetic resonance imaging (fMRI). Even in the absence of a task, the brain exhibits a high degree of functional connectivity, known as intrinsic, or resting-state, connectivity. Global default connectivity in individuals with autism versus controls is not well characterized, especially for a high-functioning young population. The aim of this study is to test whether high-functioning adolescents with ASD (HFA) have an abnormal resting-state functional connectivity. We performed spatial and temporal analyses on resting-state networks (RSNs) in 13 HFA adolescents and 13 IQ- and age-matched controls. For the spatial analysis, we used probabilistic independent component analysis (ICA) and a permutation statistical method to reveal the RSN differences between the groups. For the temporal analysis, we applied Granger causality to find differences in temporal neurodynamics. Controls and HFA display very similar patterns and strengths of resting-state connectivity. We do not find any significant differences between HFA adolescents and controls in the spatial resting-state connectivity. However, in the temporal dynamics of this connectivity, we did find differences in the causal effect properties of RSNs originating in temporal and prefrontal cortices. The results show a difference between HFA and controls in the temporal neurodynamics from the ventral attention network to the salience-executive network: a pathway involving cognitive, executive, and emotion-related cortices. We hypothesized that this weaker dynamic pathway is due to a subtle trigger challenging the cognitive state prior to the resting state.

AIRS Subpixel Cloud Characterization Using MODIS Cloud Products.

NASA Astrophysics Data System (ADS)

Li, Jun; Menzel, W. Paul; Sun, Fengying; Schmit, Timothy J.; Gurka, James

2004-08-01

The Moderate Resolution Imaging Spectroradiometer (MODIS) and the Atmospheric Infrared Sounder (AIRS) measurements from the Earth Observing System's (EOS's) Aqua satellite enable improved global monitoring of the distribution of clouds. MODIS is able to provide, at high spatial resolution (1 5 km), a cloud mask, surface and cloud types, cloud phase, cloud-top pressure (CTP), effective cloud amount (ECA), cloud particle size (CPS), and cloud optical thickness (COT). AIRS is able to provide CTP, ECA, CPS, and COT at coarser spatial resolution (13.5 km at nadir) but with much better accuracy using its high-spectral-resolution measurements. The combined MODIS AIRS system offers the opportunity for improved cloud products over those possible from either system alone. The key steps for synergistic use of imager and sounder radiance measurements are 1) collocation in space and time and 2) imager cloud amount, type, and phase determination within the sounder pixel. The MODIS and AIRS measurements from the EOS Aqua satellite provide the opportunity to study the synergistic use of advanced imager and sounder measurements. As the first step, the MODIS classification procedure is applied to identify various surface and cloud types within an AIRS footprint. Cloud-layer information (lower, midlevel, or high clouds) and phase information (water, ice, or mixed-phase clouds) within the AIRS footprint are sorted and characterized using MODIS 1-km-spatial-resolution data. The combined MODIS and AIRS data for various scenes are analyzed to study the utility of the synergistic use of high-spatial-resolution imager products and high-spectral-resolution sounder radiance measurements. There is relevance to the optimal use of data from the Advanced Baseline Imager (ABI) and Hyperspectral Environmental Suite (HES) systems, which are to fly on the Geostationary Operational Environmental Satellite (GOES)-R.

Selective alteration of adult hippocampal neurogenesis and impaired spatial pattern separation performance in the RSK2-deficient mouse model of Coffin-Lowry syndrome.

PubMed

Castillon, Charlotte; Lunion, Steeve; Desvignes, Nathalie; Hanauer, André; Laroche, Serge; Poirier, Roseline

2018-07-01

Adult neurogenesis is involved in certain hippocampus-dependent cognitive functions and is linked to psychiatric diseases including intellectual disabilities. The Coffin-Lowry syndrome (CLS) is a developmental disorder caused by mutations in the Rsk2 gene and characterized by intellectual disabilities associated with growth retardation. How RSK2-deficiency leads to cognitive dysfunctions in CLS is however poorly understood. Here, using Rsk2 Knock-Out mice, we characterized the impact of RSK2 deficiency on adult hippocampal neurogenesis in vivo. We report that the absence of RSK2 does not affect basal proliferation, differentiation and survival of dentate gyrus adult-born neurons but alters the maturation progression of young immature newborn neurons. Moreover, when RSK2-deficient mice were submitted to spatial learning, in contrast to wild-type mice, proliferation of adult generated neurons was decreased and no pro-survival effect of learning was observed. Thus, learning failed to recruit a selective population of young newborn neurons in association with deficient long-term memory recall. Given the proposed role of the dentate gyrus and of adult-generated newborn neurons in hippocampal-dependent pattern separation function, we explored this function in a delayed non-matching to place task and in an object-place pattern separation task and report severe deficits in spatial pattern separation in Rsk2-KO mice. Together, this study reveals a previously unknown role for RSK2 in the early stages of maturation and learning-dependent involvement of adult-born dentate gyrus neurons. These alterations associated with a deficit in the ability of RSK2-deficient mice to finely discriminate relatively similar spatial configurations, may contribute to cognitive dysfunction in CLS. Copyright © 2018 Elsevier Inc. All rights reserved.

Increased body size along urbanization gradients at both community and intraspecific level in macro-moths.

PubMed

Merckx, Thomas; Kaiser, Aurélien; Van Dyck, Hans

2018-05-23

Urbanization involves a cocktail of human-induced rapid environmental changes and is forecasted to gain further importance. Urban-heat-island effects result in increased metabolic costs expected to drive shifts towards smaller body sizes. However, urban environments are also characterized by strong habitat fragmentation, often selecting for dispersal phenotypes. Here, we investigate to what extent, and at which spatial scale(s), urbanization drives body size shifts in macro-moths-an insect group characterized by positive size-dispersal links-at both the community and intraspecific level. Using light and bait trapping as part of a replicated, spatially nested sampling design, we show that despite the observed urban warming of their woodland habitat, macro-moth communities display considerable increases in community-weighted mean body size because of stronger filtering against small species along urbanization gradients. Urbanization drives intraspecific shifts towards increased body size too, at least for a third of species analysed. These results indicate that urbanization drives shifts towards larger, and hence, more mobile species and individuals in order to mitigate low connectivity of ecological resources in urban settings. Macro-moths are a key group within terrestrial ecosystems, and since body size is central to species interactions, such urbanization-driven phenotypic change may impact urban ecosystem functioning, especially in terms of nocturnal pollination and food web dynamics. Although we show that urbanization's size-biased filtering happens simultaneously and coherently at both the inter- and intraspecific level, we demonstrate that the impact at the community level is most pronounced at the 800 m radius scale, whereas species-specific size increases happen at local and landscape scales (50-3,200 m radius), depending on the species. Hence, measures-such as creating and improving urban green infrastructure-to mitigate the effects of urbanization on body size will have to be implemented at multiple spatial scales in order to be most effective. © 2018 John Wiley & Sons Ltd.

Characterizing grazing disturbance in semiarid ecosystems across broad spatial scales using multiple indices.

USGS Publications Warehouse

Beever, Erik A.; Tausch, Robin J.; Brussard, Peter F.

2003-01-01

Although management and conservation strategies continue to move toward broader spatial scales and consideration of many taxonomic groups simultaneously, researchers have struggled to characterize responses to disturbance at these scales. Most studies of disturbance by feral grazers investigate effects on only one or two ecosystem elements across small spatial scales, limiting their applicability to ecosystem-level management. To address this inadequacy, in 1997 and 1998 we examined disturbance created by feral horses (Equus caballus) in nine mountain ranges of the western Great Basin, USA, using plants, small mammals, ants, and soil compaction as indicators. Nine horse-occupied and 10 horse-removed sites were stratified into high- and low-elevation groups, and all sites at each elevation had similar vegetation type, aspect, slope gradient, and recent (≥15-yr) fire and livestock-grazing histories. Using reciprocal averaging and TWINSPAN analyses, we compared relationships among sites using five data sets: abiotic variables, percent cover by plant species, an index of abundance by plant species, 10 disturbance-sensitive response variables, and grass and shrub species considered “key” indicators by land managers. Although reciprocal averaging and TWINSPAN analyses of percent cover, abiotic variables, and key species suggested relationships between sites influenced largely by biogeography (i.e., mountain range), disturbance-sensitive variables clearly segregated horse-occupied and horse-removed sites. These analyses suggest that the influence of feral horses on many Great Basin ecosystem attributes is not being detected by monitoring only palatable plant species. We recommend development of an expanded monitoring strategy based not only on established vegetation measurements investigating forage consumption, but also including disturbance-sensitive variables (e.g., soil surface hardness, abundance of ant mounds) that more completely reflect the suite of effects that a large-bodied grazer may impose on mountain ecosystems, independent of vegetation differences. By providing a broader-based mechanism for detection of adverse effects, this strategy would provide management agencies with defensible data in a sociopolitical arena that has been embroiled in conflict for several decades.

The surface roughness of (433) Eros as measured by thermal-infrared beaming

NASA Astrophysics Data System (ADS)

Rozitis, B.

2017-01-01

In planetary science, surface roughness is regarded to be a measure of surface irregularity at small spatial scales, and causes the thermal-infrared beaming effect (I.e. re-radiation of absorbed sunlight back towards to the Sun). Typically, surface roughness exhibits a degeneracy with thermal inertia when thermophysical models are fitted to disc-integrated thermal-infrared observations of asteroids because of this effect. In this work, it is demonstrated how surface roughness can be constrained for near-Earth asteroid (433) Eros (I.e. the target of NASA's NEAR Shoemaker mission) when using the Advanced Thermophysical Model with thermal-infrared observations taken during an `almost pole-on' illumination and viewing geometry. It is found that the surface roughness of (433) Eros is characterized by an rms slope of 38 ± 8° at the 0.5-cm spatial scale associated with its thermal-infrared beaming effect. This is slightly greater than the rms slope of 25 ± 5° implied by the NEAR Shoemaker laser ranging results when extrapolated to this spatial scale, and indicates that other surface shaping processes might operate, in addition to collisions and gravity, at spatial scales under one metre in order to make asteroid surfaces rougher. For other high-obliquity asteroids observed during `pole-on' illumination conditions, the thermal-infrared beaming effect allows surface roughness to be constrained when the sub-solar latitude is greater than 60°, and if the asteroids are observed at phase angles of less than 40°. They will likely exhibit near-Earth asteroid thermal model beaming parameters that are lower than expected for a typical asteroid at all phase angles up to 100°.

Features of influence of spatially inhomogeneous geomagnetic field on a humans heart rhythm variability

NASA Astrophysics Data System (ADS)

Tuzhilkin, D. A.; Borodin, A. S.; Shitov, A. V.

2017-11-01

The results of a study of the functioning of the human cardiovascular system in the epicentral zone of the Chui earthquake on a tectonic fault characterized by a sharp gradient zone of a regional magnetic field are presented. It is shown that in the dynamics of the daily distribution of RR-intervals, events corresponding to the time of visit by volunteers of sites characterized by the presence of a spatially inhomogeneous geomagnetic field are singled out. In particular, there is a decrease in the average period of cardiac contractions.

Regional-specific Stochastic Simulation of Spatially-distributed Ground-motion Time Histories using Wavelet Packet Analysis

NASA Astrophysics Data System (ADS)

Huang, D.; Wang, G.

2014-12-01

Stochastic simulation of spatially distributed ground-motion time histories is important for performance-based earthquake design of geographically distributed systems. In this study, we develop a novel technique to stochastically simulate regionalized ground-motion time histories using wavelet packet analysis. First, a transient acceleration time history is characterized by wavelet-packet parameters proposed by Yamamoto and Baker (2013). The wavelet-packet parameters fully characterize ground-motion time histories in terms of energy content, time- frequency-domain characteristics and time-frequency nonstationarity. This study further investigates the spatial cross-correlations of wavelet-packet parameters based on geostatistical analysis of 1500 regionalized ground motion data from eight well-recorded earthquakes in California, Mexico, Japan and Taiwan. The linear model of coregionalization (LMC) is used to develop a permissible spatial cross-correlation model for each parameter group. The geostatistical analysis of ground-motion data from different regions reveals significant dependence of the LMC structure on regional site conditions, which can be characterized by the correlation range of Vs30 in each region. In general, the spatial correlation and cross-correlation of wavelet-packet parameters are stronger if the site condition is more homogeneous. Using the regional-specific spatial cross-correlation model and cokriging technique, wavelet packet parameters at unmeasured locations can be best estimated, and regionalized ground-motion time histories can be synthesized. Case studies and blind tests demonstrated that the simulated ground motions generally agree well with the actual recorded data, if the influence of regional-site conditions is considered. The developed method has great potential to be used in computational-based seismic analysis and loss estimation in a regional scale.

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

DOE PAGES

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; ...

2017-09-28

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

NASA Astrophysics Data System (ADS)

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; Crump, Alex R.; Chen, Xingyuan; Hess, Nancy

2017-09-01

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but only in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Combining such an approach with broader knowledge of thresholding behavior - here related to active layer depth - would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.

The spatial distribution of gender differences in obesity prevalence differs from overall obesity prevalence among US adults.

PubMed

Gartner, Danielle R; Taber, Daniel R; Hirsch, Jana A; Robinson, Whitney R

2016-04-01

Although obesity disparities between racial and socioeconomic groups have been well characterized, those based on gender and geography have not been as thoroughly documented. This study describes obesity prevalence by state, gender, and race and/or ethnicity to (1) characterize obesity gender inequality, (2) determine if the geographic distribution of inequality is spatially clustered, and (3) contrast the spatial clustering patterns of obesity gender inequality with overall obesity prevalence. Data from the Centers for Disease Control and Prevention's 2013 Behavioral Risk Factor Surveillance System were used to calculate state-specific obesity prevalence and gender inequality measures. Global and local Moran's indices were calculated to determine spatial autocorrelation. Age-adjusted, state-specific obesity prevalence difference and ratio measures show spatial autocorrelation (z-score = 4.89, P-value < .001). Local Moran's indices indicate the spatial distributions of obesity prevalence and obesity gender inequalities are not the same. High and low values of obesity prevalence and gender inequalities cluster in different areas of the United States. Clustering of gender inequality suggests that spatial processes operating at the state level, such as occupational or physical activity policies or social norms, are involved in the etiology of the inequality and necessitate further attention to the determinates of obesity gender inequality. Copyright © 2016 Elsevier Inc. All rights reserved.

Quantifying seascape structure: Extending terrestrial spatial pattern metrics to the marine realm

USGS Publications Warehouse

Wedding, L.M.; Christopher, L.A.; Pittman, S.J.; Friedlander, A.M.; Jorgensen, S.

2011-01-01

Spatial pattern metrics have routinely been applied to characterize and quantify structural features of terrestrial landscapes and have demonstrated great utility in landscape ecology and conservation planning. The important role of spatial structure in ecology and management is now commonly recognized, and recent advances in marine remote sensing technology have facilitated the application of spatial pattern metrics to the marine environment. However, it is not yet clear whether concepts, metrics, and statistical techniques developed for terrestrial ecosystems are relevant for marine species and seascapes. To address this gap in our knowledge, we reviewed, synthesized, and evaluated the utility and application of spatial pattern metrics in the marine science literature over the past 30 yr (1980 to 2010). In total, 23 studies characterized seascape structure, of which 17 quantified spatial patterns using a 2-dimensional patch-mosaic model and 5 used a continuously varying 3-dimensional surface model. Most seascape studies followed terrestrial-based studies in their search for ecological patterns and applied or modified existing metrics. Only 1 truly unique metric was found (hydrodynamic aperture applied to Pacific atolls). While there are still relatively few studies using spatial pattern metrics in the marine environment, they have suffered from similar misuse as reported for terrestrial studies, such as the lack of a priori considerations or the problem of collinearity between metrics. Spatial pattern metrics offer great potential for ecological research and environmental management in marine systems, and future studies should focus on (1) the dynamic boundary between the land and sea; (2) quantifying 3-dimensional spatial patterns; and (3) assessing and monitoring seascape change. ?? Inter-Research 2011.

Searching for the right scale in catchment hydrology: the effect of soil spatial variability in simulated states and fluxes

NASA Astrophysics Data System (ADS)

Baroni, Gabriele; Zink, Matthias; Kumar, Rohini; Samaniego, Luis; Attinger, Sabine

2017-04-01

The advances in computer science and the availability of new detailed data-sets have led to a growing number of distributed hydrological models applied to finer and finer grid resolutions for larger and larger catchment areas. It was argued, however, that this trend does not necessarily guarantee better understanding of the hydrological processes or it is even not necessary for specific modelling applications. In the present study, this topic is further discussed in relation to the soil spatial heterogeneity and its effect on simulated hydrological state and fluxes. To this end, three methods are developed and used for the characterization of the soil heterogeneity at different spatial scales. The methods are applied at the soil map of the upper Neckar catchment (Germany), as example. The different soil realizations are assessed regarding their impact on simulated state and fluxes using the distributed hydrological model mHM. The results are analysed by aggregating the model outputs at different spatial scales based on the Representative Elementary Scale concept (RES) proposed by Refsgaard et al. (2016). The analysis is further extended in the present study by aggregating the model output also at different temporal scales. The results show that small scale soil variabilities are not relevant when the integrated hydrological responses are considered e.g., simulated streamflow or average soil moisture over sub-catchments. On the contrary, these small scale soil variabilities strongly affect locally simulated states and fluxes i.e., soil moisture and evapotranspiration simulated at the grid resolution. A clear trade-off is also detected by aggregating the model output by spatial and temporal scales. Despite the scale at which the soil variabilities are (or are not) relevant is not universal, the RES concept provides a simple and effective framework to quantify the predictive capability of distributed models and to identify the need for further model improvements e.g., finer resolution input. For this reason, the integration in this analysis of all the relevant input factors (e.g., precipitation, vegetation, geology) could provide a strong support for the definition of the right scale for each specific model application. In this context, however, the main challenge for a proper model assessment will be the correct characterization of the spatio- temporal variability of each input factor. Refsgaard, J.C., Højberg, A.L., He, X., Hansen, A.L., Rasmussen, S.H., Stisen, S., 2016. Where are the limits of model predictive capabilities?: Representative Elementary Scale - RES. Hydrol. Process. doi:10.1002/hyp.11029

Psychophysical and perceptual performance in a simulated-scotoma model of human eye injury

NASA Astrophysics Data System (ADS)

Brandeis, R.; Egoz, I.; Peri, D.; Sapiens, N.; Turetz, J.

2008-02-01

Macular scotomas, affecting visual functioning, characterize many eye and neurological diseases like AMD, diabetes mellitus, multiple sclerosis, and macular hole. In this work, foveal visual field defects were modeled, and their effects were evaluated on spatial contrast sensitivity and a task of stimulus detection and aiming. The modeled occluding scotomas, of different size, were superimposed on the stimuli presented on the computer display, and were stabilized on the retina using a mono Purkinje Eye-Tracker. Spatial contrast sensitivity was evaluated using square-wave grating stimuli, whose contrast thresholds were measured using the method of constant stimuli with "catch trials". The detection task consisted of a triple conjunctive visual search display of: size (in visual angle), contrast and background (simple, low-level features vs. complex, high-level features). Search/aiming accuracy as well as R.T. measures used for performance evaluation. Artificially generated scotomas suppressed spatial contrast sensitivity in a size dependent manner, similar to previous studies. Deprivation effect was dependent on spatial frequency, consistent with retinal inhomogeneity models. Stimulus detection time was slowed in complex background search situation more than in simple background. Detection speed was dependent on scotoma size and size of stimulus. In contrast, visually guided aiming was more sensitive to scotoma effect in simple background search situation than in complex background. Both stimulus aiming R.T. and accuracy (precision targeting) were impaired, as a function of scotoma size and size of stimulus. The data can be explained by models distinguishing between saliency-based, parallel and serial search processes, guiding visual attention, which are supported by underlying retinal as well as neural mechanisms.

EVOLUTION OF NEAR-SURFACE FLOWS INFERRED FROM HIGH-RESOLUTION RING-DIAGRAM ANALYSIS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bogart, Richard S.; Baldner, Charles S.; Basu, Sarbani

2015-07-10

Ring-diagram analysis of acoustic waves observed at the photosphere can provide a relatively robust determination of the sub-surface flows at a particular time under a particular region. The depth of penetration of the waves is related to the size of the region, hence the depth extent of the measured flows is inversely proportional to the spatial resolution. Most ring-diagram analysis has focused on regions of extent ∼15° (180 Mm) or more in order to provide reasonable mode sets for inversions. Helioseismic and Magnetic Imager (HMI) data analysis also provides a set of ring fit parameters on a scale three timesmore » smaller. These provide flow estimates for the outer 1% (7 Mm) of the Sun only, with very limited depth resolution, but with spatial resolution adequate to map structures potentially associated with the belts and regions of magnetic activity. There are a number of systematic effects affecting the determination of flows from a local helioseismic analysis of regions over different parts of the observable disk, and not all of them are well understood. In this study we characterize those systematic effects with higher spatial resolution so that they may be accounted for more effectively in mapping the temporal and spatial evolution of the flows. Leaving open the question of the mean structure of the global meridional circulation and the differential rotation, we describe the near-surface flow anomalies in time and latitude corresponding to the torsional oscillation pattern in differential rotation and analogous patterns in the meridional cell structure as observed by the Solar Dynamics Observatory/HMI.« less

Detecting single-trial EEG evoked potential using a wavelet domain linear mixed model: application to error potentials classification.

PubMed

Spinnato, J; Roubaud, M-C; Burle, B; Torrésani, B

2015-06-01

The main goal of this work is to develop a model for multisensor signals, such as magnetoencephalography or electroencephalography (EEG) signals that account for inter-trial variability, suitable for corresponding binary classification problems. An important constraint is that the model be simple enough to handle small size and unbalanced datasets, as often encountered in BCI-type experiments. The method involves the linear mixed effects statistical model, wavelet transform, and spatial filtering, and aims at the characterization of localized discriminant features in multisensor signals. After discrete wavelet transform and spatial filtering, a projection onto the relevant wavelet and spatial channels subspaces is used for dimension reduction. The projected signals are then decomposed as the sum of a signal of interest (i.e., discriminant) and background noise, using a very simple Gaussian linear mixed model. Thanks to the simplicity of the model, the corresponding parameter estimation problem is simplified. Robust estimates of class-covariance matrices are obtained from small sample sizes and an effective Bayes plug-in classifier is derived. The approach is applied to the detection of error potentials in multichannel EEG data in a very unbalanced situation (detection of rare events). Classification results prove the relevance of the proposed approach in such a context. The combination of the linear mixed model, wavelet transform and spatial filtering for EEG classification is, to the best of our knowledge, an original approach, which is proven to be effective. This paper improves upon earlier results on similar problems, and the three main ingredients all play an important role.

Optical Radiation from Integer Quantum Hall States in Dirac Materials

NASA Astrophysics Data System (ADS)

Gullans, Michael; Taylor, Jacob; Ghaemi, Pouyan; Hafezi, Mohammad

Quantum Hall systems exhibit topologically protected edge states, which can have a macroscopic spatial extent. Such edge states provide a unique opportunity to study a quantum emitter whose size far exceeds the wavelength of emitted light. To better understand this limit, we theoretically characterize the optical radiation from integer quantum Hall states in two-dimensional Dirac materials. We show that the scattered light from the bulk reflects the spatial profile of the wavefunctions, enabling spatial imaging of the disorder landscape. We find that the radiation from the edge states are characterized by the presence of large multipole moments in the far-field. This multipole radiation arises from the transfer of angular momentum from the electrons into the scattered light, enabling the generation of coherent light with high orbital angular momentum.

hyperspectral characterization of tissue simulating phantoms using a supercontinuum laser in a spatial frequency domain imaging instrument

NASA Astrophysics Data System (ADS)

Torabzadeh, Mohammad; Stockton, Patrick; Kennedy, Gordon T.; Saager, Rolf B.; Durkin, Anthony J.; Bartels, Randy A.; Tromberg, Bruce J.

2018-02-01

Hyperspectral Imaging (HSI) is a growing field in tissue optics due to its ability to collect continuous spectral features of a sample without a contact probe. Spatial Frequency Domain Imaging (SFDI) is a non-contact wide-field spectral imaging technique that is used to quantitatively characterize tissue structure and chromophore concentration. In this study, we designed a Hyperspectral SFDI (H-SFDI) instrument which integrated a supercontinuum laser source to a wavelength tuning optical configuration and a sCMOS camera to extract spatial (Field of View: 2cm×2cm) and broadband spectral features (580nm-950nm). A preliminary experiment was also performed to integrate the hyperspectral projection unit to a compressed single pixel camera and Light Labeling (LiLa) technique.

Non-destructive spatial characterization of buried interfaces in multilayer stacks via two color picosecond acoustics

NASA Astrophysics Data System (ADS)

Faria, Jorge C. D.; Garnier, Philippe; Devos, Arnaud

2017-12-01

We demonstrate the ability to construct wide-area spatial mappings of buried interfaces in thin film stacks in a non-destructive manner using two color picosecond acoustics. Along with the extraction of layer thicknesses and sound velocities from acoustic signals, the morphological information presented is a powerful demonstration of phonon imaging as a metrological tool. For a series of heterogeneous (polymer, metal, and semiconductor) thin film stacks that have been treated with a chemical procedure known to alter layer properties, the spatial mappings reveal changes to interior thicknesses and chemically modified surface features without the need to remove uppermost layers. These results compare well to atomic force microscopy scans showing that the technique provides a significant advantage to current characterization methods for industrially important device stacks.

Characterization for capillary barriers effects in a sand box test using time-lapsed GPR measurements

NASA Astrophysics Data System (ADS)

Kuroda, S.; Ishii, N.; Morii, T.

2017-12-01

Capillary barriers have been known as the method to protect subsurface regions against infiltration from soil surface. It is caused by essentially heterogeneous structure in permeability or soil physical property and produce non-uniform infiltration process then, in order to estimate the actual situation of the capillary barrier effect, the site-characterization with imaging technique like geophysical prospecting is effective. In this study, we examine the applicability of GPR to characterization for capillary barriers. We built a sand box with 90x340x90cm in which a thin high-permeable gravel layer was embedded as a capillary barrier. We conducted an infiltration test in the sand box using porous tube array for irrigation. It is expected to lead to non-uniform flow of soil water induced by capillary barrier effects. We monitored this process by various types of GPR measurements, including time-lapsed common offset profiling (COP) with multi- frequency antenna and transmission measurements like cross-borehole radar. At first, we conducted GPR common-offset survey. It could show the depth of capillary barrier in sand box. After that we conducted the infiltration test and GPR monitoring for infiltration process. GPR profiles can detect the wetting front and estimate water content change in the soil layer above the capillary barrier. From spatial change in these results we can estimate the effect of capillary barrier and the zone where the break through occur or not. Based on these results, we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil. At first, we conducted GPR common-offset survey. It could show the depth of capillary barrier in sand box. After that we conducted the infiltration test and GPR monitoring for infiltration process. GPR profiles can detect the wetting front and estimate water content change in the soil layer above the capillary barrier. From spatial change in these results we can estimate the effect of capillary barrier and the zone where the break through occur. Based on these results, we will discuss the applicability of GPR for monitoring the phenomena around the capillary barrier of soil.

A SPATIALLY EXPLICIT HIERARCHICAL APPROACH TO MODELING COMPLEX ECOLOGICAL SYSTEMS: THEORY AND APPLICATIONS. (R827676)

EPA Science Inventory

Ecological systems are generally considered among the most complex because they are characterized by a large number of diverse components, nonlinear interactions, scale multiplicity, and spatial heterogeneity. Hierarchy theory, as well as empirical evidence, suggests that comp...

SPATIAL PATTERNS AND ECOLOGICAL DETERMINANTS OF BENTHIC ALGAL ASSEMBLAGES IN MID-ATLANTIC STREAMS, USA

EPA Science Inventory

We attempted to identify spatial patterns and determinants for benthic algal assemblages in Mid-Atlantic streams. Periphyton, water chemistry, stream physical habitat, riparian conditions, and land cover/use in watersheds were characterized at 89 randomly selected stream sites i...

Spatially resolved spectroscopy analysis of the XMM-Newton large program on SN1006

NASA Astrophysics Data System (ADS)

Li, Jiang-Tao; Decourchelle, Anne; Miceli, Marco; Vink, Jacco; Bocchino, Fabrizio

2016-04-01

We perform analysis of the XMM-Newton large program on SN1006 based on our newly developed methods of spatially resolved spectroscopy analysis. We extract spectra from low and high resolution meshes. The former (3596 meshes) is used to roughly decompose the thermal and non-thermal components and characterize the spatial distributions of different parameters, such as temperature, abundances of different elements, ionization age, and electron density of the thermal component, as well as photon index and cutoff frequency of the non-thermal component. On the other hand, the low resolution meshes (583 meshes) focus on the interior region dominated by the thermal emission and have enough counts to well characterize the Si lines. We fit the spectra from the low resolution meshes with different models, in order to decompose the multiple plasma components at different thermal and ionization states and compare their spatial distributions. In this poster, we will present the initial results of this project.

Characterization of nanoscale spatial distribution of small molecules in amorphous polymer matrices

NASA Astrophysics Data System (ADS)

Ricarte, Ralm; Hillmyer, Marc; Lodge, Timothy

Hydroxypropyl methylcellulose acetate succinate (HPMCAS) can significantly enhance the efficacy of active pharmaceutical ingredients (APIs). Yet, the interactions between species in HPMCAS-API blends are not understood. Elucidating these interactions is difficult because the spatial distributions of HPMCAS and API in the blends are ambiguous; the polymer and drug may be molecularly mixed or the species may form phase separated domains. As these phase separated domains may be less than 100 nm in size, traditional characterization techniques may not accurately evaluate the spatial distribution. To address this challenge, we explore the use of electron energy-loss spectroscopy (EELS) for detecting the model API phenytoin in an HPMCAS-phenytoin blend. Using EELS, we directly measured with high accuracy and precision the phenytoin concentrations in several blends. We present evidence that suggests phase separation occurs in blends that have a phenytoin loading of approximately 50 wt percent. Finally, we demonstrate that this technique achieves a sub-100 nm spatial resolution and can detect several other APIs.

Monitoring of heavy metal concentrations in home outdoor air using moss bags.

PubMed

Rivera, Marcela; Zechmeister, Harald; Medina-Ramón, Mercedes; Basagaña, Xavier; Foraster, Maria; Bouso, Laura; Moreno, Teresa; Solanas, Pascual; Ramos, Rafael; Köllensperger, Gunda; Deltell, Alexandre; Vizcaya, David; Künzli, Nino

2011-04-01

One monitoring station is insufficient to characterize the high spatial variation of traffic-related heavy metals within cities. We tested moss bags (Hylocomium splendens), deployed in a dense network, for the monitoring of metals in outdoor air and characterized metals' long-term spatial distribution and its determinants in Girona, Spain. Mosses were exposed outside 23 homes for two months; NO₂ was monitored for comparison. Metals were not highly correlated with NO₂ and showed higher spatial variation than NO₂. Regression models explained 61-85% of Cu, Cr, Mo, Pb, Sb, Sn, and Zn and 72% of NO₂ variability. Metals were strongly associated with the number of bus lines in the nearest street. Heavy metals are an alternative traffic-marker to NO₂ given their toxicological relevance, stronger association with local traffic and higher spatial variability. Monitoring heavy metals with mosses is appealing, particularly for long-term exposure assessment, as mosses can remain on site many months without maintenance. Copyright © 2010 Elsevier Ltd. All rights reserved.

Dynamic MTF, an innovative test bench for detector characterization

NASA Astrophysics Data System (ADS)

Emmanuel, Rossi; Raphaël, Lardière; Delmonte, Stephane

2017-11-01

PLEIADES HR are High Resolution satellites for Earth observation. Placed at 695km they reach a 0.7m spatial resolution. To allow such performances, the detectors are working in a TDI mode (Time and Delay Integration) which consists in a continuous charge transfer from one line to the consecutive one while the image is passing on the detector. The spatial resolution, one of the most important parameter to test, is characterized by the MTF (Modulation Transfer Function). Usually, detectors are tested in a staring mode. For a higher level of performances assessment, a dedicated bench has been set-up, allowing detectors' MTF characterization in the TDI mode. Accuracy and reproducibility are impressive, opening the door to new perspectives in term of HR imaging systems testing.

Evaluating Hyperspectral Imaging of Wetland Vegetation as a Tool for Detecting Estuarine Nutrient Enrichment

DTIC Science & Technology

2008-05-01

the vegetation’s uptake of water column nutrients produces a spectral response; and 3) the spectral and spatial resolutions ...analysis. This allowed us to evaluate these assumptions at the landscape level, by using the high spectral and spatial resolution of the hyperspectral... spatial resolution (2.5 m pixels) HyMap hyperspectral imagery of the entire wetland. After using a hand-held spectrometer to characterize

Polymeric spatial resolution test patterns for mass spectrometry imaging using nano-thermal analysis with atomic force microscopy

DOE PAGES

Tai, Tamin; Kertesz, Vilmos; Lin, Ming -Wei; ...

2017-05-11

As the spatial resolution of mass spectrometry imaging technologies has begun to reach into the nanometer regime, finding readily available or easily made resolution reference materials has become particularly challenging for molecular imaging purposes. This study describes the fabrication, characterization and use of vertical line array polymeric spatial resolution test patterns for nano-thermal analysis/atomic force microscopy/mass spectrometry chemical imaging.

Polymeric spatial resolution test patterns for mass spectrometry imaging using nano-thermal analysis with atomic force microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tai, Tamin; Kertesz, Vilmos; Lin, Ming -Wei

As the spatial resolution of mass spectrometry imaging technologies has begun to reach into the nanometer regime, finding readily available or easily made resolution reference materials has become particularly challenging for molecular imaging purposes. This study describes the fabrication, characterization and use of vertical line array polymeric spatial resolution test patterns for nano-thermal analysis/atomic force microscopy/mass spectrometry chemical imaging.

Characterization of a normal control group: are they healthy?

PubMed

Aine, C J; Sanfratello, L; Adair, J C; Knoefel, J E; Qualls, C; Lundy, S L; Caprihan, A; Stone, D; Stephen, J M

2014-01-01

We examined the health of a control group (18-81years) in our aging study, which is similar to control groups used in other neuroimaging studies. The current study was motivated by our previous results showing that one third of the elder control group had moderate to severe white matter hyperintensities and/or cortical volume loss which correlated with poor performance on memory tasks. Therefore, we predicted that cardiovascular risk factors (e.g., hypertension, high cholesterol) within the control group would account for significant variance on working memory task performance. Fifty-five participants completed 4 verbal and spatial working memory tasks, neuropsychological exams, diffusion tensor imaging (DTI), and blood tests to assess vascular risk. In addition to using a repeated measures ANOVA design, a cluster analysis was applied to the vascular risk measures as a data reduction step to characterize relationships between conjoint risk factors. The cluster groupings were used to predict working memory performance. The results show that higher levels of systolic blood pressure were associated with: 1) poor spatial working memory accuracy; and 2) lower fractional anisotropy (FA) values in multiple brain regions. In contrast, higher levels of total cholesterol corresponded with increased accuracy in verbal working memory. An association between lower FA values and higher cholesterol levels were identified in different brain regions from those associated with systolic blood pressure. The conjoint risk analysis revealed that Risk Cluster Group 3 (the group with the greatest number of risk factors) displayed: 1) the poorest performance on the spatial working memory tasks; 2) the longest reaction times across both spatial and verbal memory tasks; and 3) the lowest FA values across widespread brain regions. Our results confirm that a considerable range of vascular risk factors are present in a typical control group, even in younger individuals, which have robust effects on brain anatomy and function. These results present a new challenge to neuroimaging studies both for defining a cohort from which to characterize 'normative' brain circuitry and for establishing a control group to compare with other clinical populations. © 2013.

Characterization of Anisotropic Leaky Mode Modulators for Holovideo

PubMed Central

Gneiting, Scott; Kimball, Jacob; Henrie, Andrew; McLaughlin, Stephen; DeGraw, Taylor; Smalley, Daniel

2016-01-01

Holovideo displays are based on light-bending spatial light modulators. One such spatial light modulator is the anisotropic leaky mode modulator. This modulator is particularly well suited for holographic video experimentation as it is relatively simple and inexpensive to fabricate1-3. Some additional advantages of leaky mode devices include: large aggregate bandwidth, polarization separation of signal light from noise, large angular deflection and frequency control of color1. In order to realize these advantages, it is necessary to be able to adequately characterize these devices as their operation is strongly dependent on waveguide and transducer parameters4. To characterize the modulators, the authors use a commercial prism coupler as well as a custom characterization apparatus to identify guided modes, calculate waveguide thickness and finally to map the device's frequency input and angular output of leaky mode modulators. This work gives a detailed description of the measurement and characterization of leaky mode modulators suitable for full-color holographic video. PMID:27023115

Sound-field measurement with moving microphones

PubMed Central

Katzberg, Fabrice; Mazur, Radoslaw; Maass, Marco; Koch, Philipp; Mertins, Alfred

2017-01-01

Closed-room scenarios are characterized by reverberation, which decreases the performance of applications such as hands-free teleconferencing and multichannel sound reproduction. However, exact knowledge of the sound field inside a volume of interest enables the compensation of room effects and allows for a performance improvement within a wide range of applications. The sampling of sound fields involves the measurement of spatially dependent room impulse responses, where the Nyquist-Shannon sampling theorem applies in the temporal and spatial domains. The spatial measurement often requires a huge number of sampling points and entails other difficulties, such as the need for exact calibration of a large number of microphones. In this paper, a method for measuring sound fields using moving microphones is presented. The number of microphones is customizable, allowing for a tradeoff between hardware effort and measurement time. The goal is to reconstruct room impulse responses on a regular grid from data acquired with microphones between grid positions, in general. For this, the sound field at equidistant positions is related to the measurements taken along the microphone trajectories via spatial interpolation. The benefits of using perfect sequences for excitation, a multigrid recovery, and the prospects for reconstruction by compressed sensing are presented. PMID:28599533

Spatial displays as a means to increase pilot situational awareness

NASA Technical Reports Server (NTRS)

Fadden, Delmar M.; Braune, Rolf; Wiedemann, John

1989-01-01

Experiences raise a number of concerns for future spatial-display developers. While the promise of spatial displays is great, the cost of their development will be correspondingly large. The knowledge and skills which must be coordinated to ensure successful results is unprecedent. From the viewpoint of the designer, basic knowledge of how human beings perceive and process complex displays appears fragmented and largely unquantified. Methodologies for display development require prototyping and testing with subject pilots for even small changes. Useful characterizations of the range of differences between individual users is nonexistent or at best poorly understood. The nature, significance, and frequency of interpretation errors associated with complex integrated displays is unexplored and undocumented territory. Graphic displays have intuitive appeal and can achieve face validity much more readily than earlier symbolic displays. The risk of misleading the pilot is correspondingly greater. Thus while some in the research community are developing the tools and techniques necessary for effective spatial-display development, potential users must be educated about the issues so that informed choices can be made. The scope of the task facing all is great. The task is challenging and the potential for meaningful contributions at all levels is high indeed.

Multi-element fiber technology for space-division multiplexing applications.

PubMed

Jain, S; Rancaño, V J F; May-Smith, T C; Petropoulos, P; Sahu, J K; Richardson, D J

2014-02-24

A novel technological approach to space division multiplexing (SDM) based on the use of multiple individual fibers embedded in a common polymer coating material is presented, which is referred to as Multi-Element Fiber (MEF). The approach ensures ultralow crosstalk between spatial channels and allows for cost-effective ways of realizing multi-spatial channel amplification and signal multiplexing/demultiplexing. Both the fabrication and characterization of a passive 3-element MEF for data transmission, and an active 5-element erbium/ytterbium doped MEF for cladding-pumped optical amplification that uses one of the elements as an integrated pump delivery fiber is reported. Finally, both components were combined to emulate an optical fiber network comprising SDM transmission lines and amplifiers, and illustrate the compatibility of the approach with existing installed single-mode WDM fiber systems.

Multi-temporal AirSWOT elevations on the Willamette river: error characterization and algorithm testing

NASA Astrophysics Data System (ADS)

Tuozzolo, S.; Frasson, R. P. M.; Durand, M. T.

2017-12-01

We analyze a multi-temporal dataset of in-situ and airborne water surface measurements from the March 2015 AirSWOT field campaign on the Willamette River in Western Oregon, which included six days of AirSWOT flights over a 75km stretch of the river. We examine systematic errors associated with dark water and layover effects in the AirSWOT dataset, and test the efficacies of different filtering and spatial averaging techniques at reconstructing the water surface profile. Finally, we generate a spatially-averaged time-series of water surface elevation and water surface slope. These AirSWOT-derived reach-averaged values are ingested in a prospective SWOT discharge algorithm to assess its performance on SWOT-like data collected from a borderline SWOT-measurable river (mean width = 90m).

Software for Simulation of Hyperspectral Images

NASA Technical Reports Server (NTRS)

Richtsmeier, Steven C.; Singer-Berk, Alexander; Bernstein, Lawrence S.

2002-01-01

A package of software generates simulated hyperspectral images for use in validating algorithms that generate estimates of Earth-surface spectral reflectance from hyperspectral images acquired by airborne and spaceborne instruments. This software is based on a direct simulation Monte Carlo approach for modeling three-dimensional atmospheric radiative transport as well as surfaces characterized by spatially inhomogeneous bidirectional reflectance distribution functions. In this approach, 'ground truth' is accurately known through input specification of surface and atmospheric properties, and it is practical to consider wide variations of these properties. The software can treat both land and ocean surfaces and the effects of finite clouds with surface shadowing. The spectral/spatial data cubes computed by use of this software can serve both as a substitute for and a supplement to field validation data.

Simulation of Hyperspectral Images

NASA Technical Reports Server (NTRS)

Richsmeier, Steven C.; Singer-Berk, Alexander; Bernstein, Lawrence S.

2004-01-01

A software package generates simulated hyperspectral imagery for use in validating algorithms that generate estimates of Earth-surface spectral reflectance from hyperspectral images acquired by airborne and spaceborne instruments. This software is based on a direct simulation Monte Carlo approach for modeling three-dimensional atmospheric radiative transport, as well as reflections from surfaces characterized by spatially inhomogeneous bidirectional reflectance distribution functions. In this approach, "ground truth" is accurately known through input specification of surface and atmospheric properties, and it is practical to consider wide variations of these properties. The software can treat both land and ocean surfaces, as well as the effects of finite clouds with surface shadowing. The spectral/spatial data cubes computed by use of this software can serve both as a substitute for, and a supplement to, field validation data.

Optical evaluation of the wave filtering properties of graded undulated lattices

NASA Astrophysics Data System (ADS)

Trainiti, G.; Rimoli, J. J.; Ruzzene, M.

2018-03-01

We investigate and experimentally demonstrate the elastic wave filtering properties of graded undulated lattices. Square reticulates composed of curved beams are characterized by graded mechanical properties which result from the spatial modulation of the curvature parameter. Among such properties, the progressive formation of frequency bandgaps leads to strong wave attenuation over a broad frequency range. The experimental investigation of wave transmission and the detection of full wavefields effectively illustrate this behavior. Transmission measurements are conducted using a scanning laser Doppler vibrometer, while a dedicated digital image correlation procedure is implemented to capture in-plane wave motion at selected frequencies. The presented results illustrate the broadband attenuation characteristics resulting from spatial grading of the lattice curvature, whose in-depth investigation is enabled by the presented experimental procedures.

LPE grown LSO:Tb scintillator films for high-resolution X-ray imaging applications at synchrotron light sources

NASA Astrophysics Data System (ADS)

Cecilia, A.; Rack, A.; Douissard, P.-A.; Martin, T.; Dos Santos Rolo, T.; Vagovič, P.; Hamann, E.; van de Kamp, T.; Riedel, A.; Fiederle, M.; Baumbach, T.

2011-08-01

Within the project ScinTAX of the 6th framework program (FP6) of the European Commission (SCINTAX—STRP 033 427) we have developed a new thin single crystal scintillator for high-resolution X-ray imaging. The scintillator is based on a Tb-doped Lu2SiO5 (LSO) film epitaxially grown on an adapted substrate. The high density, effective atomic number and light yield of the scintillating LSO significantly improves the efficiency of the X-ray imaging detectors currently used in synchrotron micro-imaging applications. In this work we present the characterization of the scintillating LSO films in terms of their spatial resolution performance and we provide two examples of high spatial and high temporal resolution applications.

Nd:AlN polycrystalline ceramics: A candidate media for tunable, high energy, near IR lasers

NASA Astrophysics Data System (ADS)

Wieg, A. T.; Grossnickle, M. J.; Kodera, Y.; Gabor, N. M.; Garay, J. E.

2016-09-01

We present processing and characterization of Nd-doped aluminum nitride (Nd:AlN) polycrystalline ceramics. We compare ceramics with significant segregation of Nd to those exhibiting minimal segregation. Spatially resolved photoluminescence maps reveal a strong correlation between homogeneous Nd doping and spatially homogeneous light emission. The spectroscopically resolved light emission lines show excellent agreement with the expected Nd electronic transitions. Notably, the lines are significantly broadened, producing near IR emission (˜1077 nm) with a remarkable ˜100 nm bandwidth at room temperature. We attribute the broadened lines to a combination of effects: multiple Nd-sites, anisotropy of AlN and phonon broadening. These broadened, overlapping lines in a media with excellent thermal conductivity have potential for Nd-based, tunable lasers with high average power.

Implementation and characterization of a controllable dephasing channel based on coupling polarization and spatial degrees of freedom of light.

PubMed

Urrego, Daniel F; Álvarez, Juan-Rafael; Calderón-Losada, Omar; Svozilík, Jiří; Nuñez, Mayerlin; Valencia, Alejandra

2018-04-30

We present the experimental implementation and theoretical model of a controllable dephasing quantum channel using photonic systems. The channel is implemented by coupling the polarization and the spatial distribution of light that play, in the perspective of open quantum systems, the role of quantum system and environment, respectively. The capability of controlling our channel allows us to visualize its effects in a quantum system. Different from standard dephasing channels, our channel presents an exotic behavior in the sense that the evolution of a state, from a pure to a mixed state, shows an oscillatory behavior if tracked in the Bloch sphere. Additionally, we report the evolution of the purity and perform a quantum process tomography to obtain the χ matrix associated to our channel.

Structural Organization of the Corpus Callosum Predicts Attentional Shifts after Continuous Theta Burst Stimulation.

PubMed

Chechlacz, Magdalena; Humphreys, Glyn W; Sotiropoulos, Stamatios N; Kennard, Christopher; Cazzoli, Dario

2015-11-18

Repetitive transcranial magnetic stimulation (rTMS) applied over the right posterior parietal cortex (PPC) in healthy participants has been shown to trigger a significant rightward shift in the spatial allocation of visual attention, temporarily mimicking spatial deficits observed in neglect. In contrast, rTMS applied over the left PPC triggers a weaker or null attentional shift. However, large interindividual differences in responses to rTMS have been reported. Studies measuring changes in brain activation suggest that the effects of rTMS may depend on both interhemispheric and intrahemispheric interactions between cortical loci controlling visual attention. Here, we investigated whether variability in the structural organization of human white matter pathways subserving visual attention, as assessed by diffusion magnetic resonance imaging and tractography, could explain interindividual differences in the effects of rTMS. Most participants showed a rightward shift in the allocation of spatial attention after rTMS over the right intraparietal sulcus (IPS), but the size of this effect varied largely across participants. Conversely, rTMS over the left IPS resulted in strikingly opposed individual responses, with some participants responding with rightward and some with leftward attentional shifts. We demonstrate that microstructural and macrostructural variability within the corpus callosum, consistent with differential effects on cross-hemispheric interactions, predicts both the extent and the direction of the response to rTMS. Together, our findings suggest that the corpus callosum may have a dual inhibitory and excitatory function in maintaining the interhemispheric dynamics that underlie the allocation of spatial attention. The posterior parietal cortex (PPC) controls allocation of attention across left versus right visual fields. Damage to this area results in neglect, characterized by a lack of spatial awareness of the side of space contralateral to the brain injury. Transcranial magnetic stimulation over the PPC is used to study cognitive mechanisms of spatial attention and to examine the potential of this technique to treat neglect. However, large individual differences in behavioral responses to stimulation have been reported. We demonstrate that the variability in the structural organization of the corpus callosum accounts for these differences. Our findings suggest novel dual mechanism of the corpus callosum function in spatial attention and have broader implications for the use of stimulation in neglect rehabilitation. Copyright © 2015 the authors 0270-6474/15/3515353-16$15.00/0.

Characteristics of flight simulator visual systems

NASA Technical Reports Server (NTRS)

Statler, I. C. (Editor)

1981-01-01

The physical parameters of the flight simulator visual system that characterize the system and determine its fidelity are identified and defined. The characteristics of visual simulation systems are discussed in terms of the basic categories of spatial, energy, and temporal properties corresponding to the three fundamental quantities of length, mass, and time. Each of these parameters are further addressed in relation to its effect, its appropriate units or descriptors, methods of measurement, and its use or importance to image quality.

Bayesian Hierarchical Model Characterization of Model Error in Ocean Data Assimilation and Forecasts

DTIC Science & Technology

2013-09-30

proof-of-concept results comparing a BHM surface wind ensemble with the increments in the surface momentum flux control vector in a four-dimensional...Surface   Momentum  Flux  Ensembles  from  Summaries  of  BHM  Winds  (Mediterranean)   include  ocean  current  effect   Td...Bayesian Hierarchical Model to provide surface momentum flux ensembles. 3 Figure 2: Domain of interest : squares indicate spatial locations where

Dynamics of the EEG of human brain in the gradient magnetic fields of geological faults in different geographical and climatic zones

NASA Astrophysics Data System (ADS)

Pobachenko, S. V.; Sokolov, M. V.; Grigoriev, P. E.; Vasilieva, I. V.

2017-11-01

There are presented the results of experimental studies of the dynamics of indices of the functional state of a person located within the zones characterized by anomalous parameters of spatial distribution of magnetic field vector values. It is shown that these geophysical modifications have a pronounced effect on the dynamics of electrical activity indices of the human brain, regardless of geographic and climatic conditions.

Characterization of shallow groundwater quality in the Lower St. Johns River Basin: a case study

Treesearch

Ying Ouyang; Jia-En Zhang; Prem Parajuli

2013-01-01

Characterization of groundwater quality allows the evaluation of groundwater pollution and provides information for better management of groundwater resources. This study characterized the shallow groundwater quality and its spatial and seasonal variations in the Lower St. Johns River Basin, Florida, USA, under agricultural, forest, wastewater, and residential land...

Relations between Spatial Distribution, Social Affiliations and Dominance Hierarchy in a Semi-Free Mandrill Population

PubMed Central

Naud, Alexandre; Chailleux, Eloise; Kestens, Yan; Bret, Céline; Desjardins, Dominic; Petit, Odile; Ngoubangoye, Barthélémy; Sueur, Cédric

2016-01-01

Although there exist advantages to group-living in comparison to a solitary lifestyle, costs and gains of group-living may be unequally distributed among group members. Predation risk, vigilance levels and food intake may be unevenly distributed across group spatial geometry and certain within-group spatial positions may be more or less advantageous depending on the spatial distribution of these factors. In species characterized with dominance hierarchy, high-ranking individuals are commonly observed in advantageous spatial position. However, in complex social systems, individuals can develop affiliative relationships that may balance the effect of dominance relationships in individual's spatial distribution. The objective of the present study is to investigate how the group spatial distribution of a semi-free ranging colony of Mandrills relates to its social organization. Using spatial observations in an area surrounding the feeding zone, we tested the three following hypothesis: (1) does dominance hierarchy explain being observed in proximity or far from a food patch? (2) Do affiliative associations also explain being observed in proximity or far from a food patch? (3) Do the differences in rank in the group hierarchy explain being co-observed in proximity of a food patch? Our results showed that high-ranking individuals were more observed in proximity of the feeding zone while low-ranking individuals were more observed at the boundaries of the observation area. Furthermore, we observed that affiliative relationships were also associated with individual spatial distributions and explain more of the total variance of the spatial distribution in comparison with dominance hierarchy. Finally, we found that individuals observed at a same moment in proximity of the feeding zone were more likely to be distant in the hierarchy while controlling for maternal kinship, age and sex similarity. This study brings some elements about how affiliative networks and dominance hierarchy are related to spatial positions in primates. PMID:27199845

Relations between Spatial Distribution, Social Affiliations and Dominance Hierarchy in a Semi-Free Mandrill Population.

PubMed

Naud, Alexandre; Chailleux, Eloise; Kestens, Yan; Bret, Céline; Desjardins, Dominic; Petit, Odile; Ngoubangoye, Barthélémy; Sueur, Cédric

2016-01-01

Although there exist advantages to group-living in comparison to a solitary lifestyle, costs and gains of group-living may be unequally distributed among group members. Predation risk, vigilance levels and food intake may be unevenly distributed across group spatial geometry and certain within-group spatial positions may be more or less advantageous depending on the spatial distribution of these factors. In species characterized with dominance hierarchy, high-ranking individuals are commonly observed in advantageous spatial position. However, in complex social systems, individuals can develop affiliative relationships that may balance the effect of dominance relationships in individual's spatial distribution. The objective of the present study is to investigate how the group spatial distribution of a semi-free ranging colony of Mandrills relates to its social organization. Using spatial observations in an area surrounding the feeding zone, we tested the three following hypothesis: (1) does dominance hierarchy explain being observed in proximity or far from a food patch? (2) Do affiliative associations also explain being observed in proximity or far from a food patch? (3) Do the differences in rank in the group hierarchy explain being co-observed in proximity of a food patch? Our results showed that high-ranking individuals were more observed in proximity of the feeding zone while low-ranking individuals were more observed at the boundaries of the observation area. Furthermore, we observed that affiliative relationships were also associated with individual spatial distributions and explain more of the total variance of the spatial distribution in comparison with dominance hierarchy. Finally, we found that individuals observed at a same moment in proximity of the feeding zone were more likely to be distant in the hierarchy while controlling for maternal kinship, age and sex similarity. This study brings some elements about how affiliative networks and dominance hierarchy are related to spatial positions in primates.

Two sampling methods yield distinct microbial signatures in the nasopharynges of asthmatic children.

PubMed

Pérez-Losada, Marcos; Crandall, Keith A; Freishtat, Robert J

2016-06-16

The nasopharynx is a reservoir for pathogens associated with respiratory illnesses, such as asthma. Next-generation sequencing (NGS) has been used to characterize the nasopharyngeal microbiome during health and disease. Most studies so far have surveyed the nasopharynx as a whole; however, less is known about spatial variation (biogeography) in nasal microenvironments and how sampling techniques may capture that microbial diversity. We used targeted 16S rRNA MiSeq sequencing and two different sampling strategies [nasal washes (NW) and nasal brushes (NB)] to characterize the nasopharyngeal microbiota in 30 asthmatic children. Nasal brushing is more abrasive than nasal washing and targeted the inner portion of the inferior turbinate. This region is expected to be different from other nasal microenvironments. Nasal washing is not spatially specific. Our 30 × 2 nasal microbiomes generated 1,474,497 sequences, from which we identified an average of 157 and 186 OTUs per sample in the NW and NB groups, respectively. Microbiotas from NB showed significantly higher alpha-diversity than microbiotas from NW. Similarly, both nasal microbiotas were distinct from each other (PCoA) and significantly differed in their community composition and abundance in at least 9 genera (effective size ≥1 %). Nasopharyngeal microenvironments in asthmatic children contain microbiotas with different diversity and structure. Nasal washes and brushes capture that diversity differently. Future microbial studies of the nasopharynx need to be aware of potential spatial variation (biogeography).

Contribution of in situ geophysical methods for the definition of the São Sebastião crater model (Azores)

NASA Astrophysics Data System (ADS)

Lopes, Isabel; Deidda, Gian Piero; Mendes, Manuela; Strobbia, Claudio; Santos, Jaime

2013-11-01

The area located inside the São Sebastião volcanic crater, at the southeast end of Terceira Island (Azores), is characterized by an important amplification of ground motion with respect to the surrounding area, as clearly demonstrated by the spatial distribution of the damage that occurred during the Terceira earthquake (the strongest earthquake felt in the Island during the recent decades - 01/01/1980 - M = 7.2). Geological and geophysical studies have been conducted, to characterize the volcanic crater and understand the different site effects that occurred in the village of São Sebastião. The complexity of the subsurface geology, with intercalations of compact basalt and soft pyroclastic deposits, is associated to extreme vertical and lateral velocity contrasts, and poses a serious challenge to different geophysical characterization methods. The available qualitative model did not allow a complete understanding of the site effects. A new seismic campaign has been designed and acquired, and a single, geologically consistent geophysical model has been generated integrating the existing and new data. The new campaign included two cross-line P-wave seismic refraction profiles, four short SH-wave seismic reflection profiles, and seven multichannel surface wave acquisitions. The integration and joint interpretation of geophysical and geological data allowed mutual validation and confirmation of data processing steps. In particular, the use of refraction, reflection and surface wave techniques allowed facing the complexity of a geology that can pose different challenges to all the methods when used individually: velocity inversions, limited reflectivity, and lateral variations. It is shown how the integration of seismic data from different methods, in the framework of a geological model, allowed the geometrical and dynamic characterization of the site. Correlation with further borehole information, then allowed the definition of a subsoil model for the crater, providing information that allowed a better understanding of the earthquake site effects in the São Sebastião village. The new near-surface geological model includes a lava layer within the soft infill materials of the crater. This new model matches closely with the damage distribution map, and explains the spatial variation of building stock performance in the 1980 earthquake.

Optimization of forest wildlife objectives

Treesearch

John Hof; Robert Haight

2007-01-01

This chapter presents an overview of methods for optimizing wildlife-related objectives. These objectives hinge on landscape pattern, so we refer to these methods as "spatial optimization." It is currently possible to directly capture deterministic characterizations of the most basic spatial relationships: proximity relationships (including those that lead to...

Methylmercury in Marine Ecosystems: Spatial Patterns and Processes of Production, Bioaccumulation, and Biomagnification

EPA Science Inventory

The spatial variation of MeHg production, bioaccumulation and biomagnification in marine food webs is poorly characterized but critical to understanding the links between sources and higher trophic levels such as fish that are ultimately vectors of human and wildlife exposure. Th...

Assessment of Near-Source Air Pollution at a Fine Spatial Scale Utilizing Mobile Monitoring Approach

EPA Science Inventory

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle – an all-electric vehicle measuring real-time concentrations of partic...

Environmental Controls on Multi-Scale Soil Nutrient Variability in the Tropics: the Importance of Land-Cover Change

NASA Astrophysics Data System (ADS)

Holmes, K. W.; Kyriakidis, P. C.; Chadwick, O. A.; Matricardi, E.; Soares, J. V.; Roberts, D. A.

2003-12-01

The natural controls on soil variability and the spatial scales at which correlation exists among soil and environmental variables are critical information for evaluating the effects of deforestation. We detect different spatial scales of variability in soil nutrient levels over a large region (hundreds of thousands of km2) in the Amazon, analyze correlations among soil properties at these different scales, and evaluate scale-specific relationships among soil properties and the factors potentially driving soil development. Statistical relationships among physical drivers of soil formation, namely geology, precipitation, terrain attributes, classified soil types, and land cover derived from remote sensing, were included to determine which factors are related to soil biogeochemistry at each spatial scale. Surface and subsurface soil profile data from a 3000 sample database collected in Rond“nia, Brazil, were used to investigate patterns in pH, phosphorus, nitrogen, organic carbon, effective cation exchange capacity, calcium, magnesium, potassium, aluminum, sand, and clay in this environment grading from closed canopy tropical forest to savanna. We focus on pH in this presentation for simplicity, because pH is the single most important soil characteristic for determining the chemical environment of higher plants and soil microbial activity. We determined four spatial scales which characterize integrated patterns of soil chemistry: less than 3 km; 3 to 10 km; 10 to 68 km; and from 68 to 550 km (extent of study area). Although the finest observable scale was fixed by the field sampling density, the coarser scales were determined from relationships in the data through coregionalization modeling, rather than being imposed by the researcher. Processes which affect soils over short distances, such as land cover and terrain attributes, were good predictors of fine scale spatial components of nutrients; processes which affect soils over very large distances, such as precipitation and geology, were better predictors at coarse spatial scales. However, this result may be affected by the resolution of the available predictor maps. Land-cover change exerted a strong influence on soil chemistry at fine spatial scales, and had progressively less of an effect at coarser scales. It is important to note that land cover, and interactions among land cover and the other predictors, continued to be a significant predictor of soil chemistry at every spatial scale up to hundreds of thousands of kilometers.

HST WFC3/IR Calibration Updates

NASA Astrophysics Data System (ADS)

Durbin, Meredith; Brammer, Gabriel; Long, Knox S.; Pirzkal, Norbert; Ryan, Russell E.; McCullough, Peter R.; Baggett, Sylvia M.; Gosmeyer, Catherine; Bourque, Matthew; HST WFC3 Team

2016-01-01

We report on several improvements to the characterization, monitoring, and calibration of the HST WFC3/IR detector. The detector performance has remained overall stable since its installation during HST Servicing Mission 4 in 2009. We present an updated persistence model that takes into account effects of exposure time and spatial variations in persistence across the detector, new grism wavelength solutions and master sky images, and a new SPARS sample sequence. We also discuss the stability of the IR gain, the time evolution and photometric properties of IR "snowballs," and the effect of IR "blobs" on point-source photometry.

Sensitivity models and design protocol for partitioning tracer tests in alluvial aquifers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jin, M.; Butler, G.W.; Jackson, R.E.

1997-11-01

Zones of dense, nonaqueous phase liquids (DNAPLs) are difficult to characterize as to their volume, composition, and spatial distribution using conventional ground-water extraction and soil-sampling methods. Such incompletely characterized sites have negative consequences for those responsible for their remedial design, e.g., the uncertainties in the optimal placement of ground-water extraction wells and in the duration of remediation. However, the recent use of the partitioning interwell tracer test (PITT) to characterize DNAPL zones at sites in New Mexico [unsaturated alluvium] and in Ohio, Texas, and Utah [saturated alluvium] demonstrates that the volume and spatial distribution of residual DNAPL can be determinedmore » with accuracy. The PITT involves injection of a suite of tracers which reversibly partition to different degrees between the DNAPL and the ground water or soil air resulting in the chromatographic separation of the tracer signals observed at the extraction well(s). The design of a PITT requires careful consideration of the hydrostratigraphic, hydraulic, and certain geochemical properties of the alluvium being tested. A three-dimensional, numerical model of a heterogeneous alluvial aquifer containing DNAPL has been developed for use with the UTCHEM simulator to demonstrate partitioning tracer testing and to address questions that are frequently raised in its application. The simulations include (1) the estimation of DNAPL volume for the simple case where only residual DNAPL is present in heterogeneous alluvium, (2) sensitivity studies to demonstrate the effect of increasingly low residual DNAPL saturation on the tracer signal, and (3) the effect of free-phase DNAPL on the estimation of the volume of DNAPL present. Furthermore, the potential interference of sedimentary organic carbon as a DNAPL surrogate on the tracer signal is considered and shown to be readily resolved by the careful choice of tracers.« less

Detecting and modelling structures on the micro and the macro scales: Assessing their effects on solute transport behaviour

NASA Astrophysics Data System (ADS)

Haslauer, C. P.; Bárdossy, A.; Sudicky, E. A.

2017-09-01

This paper demonstrates quantitative reasoning to separate the dataset of spatially distributed variables into different entities and subsequently characterize their geostatistical properties, properly. The main contribution of the paper is a statistical based algorithm that matches the manual distinction results. This algorithm is based on measured data and is generally applicable. In this paper, it is successfully applied at two datasets of saturated hydraulic conductivity (K) measured at the Borden (Canada) and the Lauswiesen (Germany) aquifers. The boundary layer was successfully delineated at Borden despite its only mild heterogeneity and only small statistical differences between the divided units. The methods are verified with the more heterogeneous Lauswiesen aquifer K data-set, where a boundary layer has previously been delineated. The effects of the macro- and the microstructure on solute transport behaviour are evaluated using numerical solute tracer experiments. Within the microscale structure, both Gaussian and non-Gaussian models of spatial dependence of K are evaluated. The effects of heterogeneity both on the macro- and the microscale are analysed using numerical tracer experiments based on four scenarios: including or not including the macroscale structures and optimally fitting a Gaussian or a non-Gaussian model for the spatial dependence in the micro-structure. The paper shows that both micro- and macro-scale structures are important, as in each of the four possible geostatistical scenarios solute transport behaviour differs meaningfully.

Examining the influence of heterogeneous porosity fields on conservative solute transport

USGS Publications Warehouse

Hu, B.X.; Meerschaert, M.M.; Barrash, W.; Hyndman, D.W.; He, C.; Li, X.; Guo, Laodong

2009-01-01

It is widely recognized that groundwater flow and solute transport in natural media are largely controlled by heterogeneities. In the last three decades, many studies have examined the effects of heterogeneous hydraulic conductivity fields on flow and transport processes, but there has been much less attention to the influence of heterogeneous porosity fields. In this study, we use porosity and particle size measurements from boreholes at the Boise Hydrogeophysical Research Site (BHRS) to evaluate the importance of characterizing the spatial structure of porosity and grain size data for solute transport modeling. Then we develop synthetic hydraulic conductivity fields based on relatively simple measurements of porosity from borehole logs and grain size distributions from core samples to examine and compare the characteristics of tracer transport through these fields with and without inclusion of porosity heterogeneity. In particular, we develop horizontal 2D realizations based on data from one of the less heterogeneous units at the BHRS to examine effects where spatial variations in hydraulic parameters are not large. The results indicate that the distributions of porosity and the derived hydraulic conductivity in the study unit resemble fractal normal and lognormal fields respectively. We numerically simulate solute transport in stochastic fields and find that spatial variations in porosity have significant effects on the spread of an injected tracer plume including a significant delay in simulated tracer concentration histories.

Is inversion based high resolution characterization of spatially heterogeneous river bed hydraulic conductivity needed and possible?

NASA Astrophysics Data System (ADS)

Kurtz, W.; Hendricks Franssen, H.-J.; Brunner, P.; Vereecken, H.

2013-05-01

River-aquifer exchange fluxes influence local and regional water balances and affect groundwater and river water quality and quantity. Unfortunately, river-aquifer exchange fluxes tend to be strongly spatially variable and it is an open research question to which degree river bed heterogeneity has to be represented in a~model in order to achieve reliable estimates of river-aquifer exchange fluxes. This research question is addressed in this paper with help of synthetic simulation experiments, which mimic the Limmat aquifer in Zurich (Switzerland), where river-aquifer exchange fluxes and groundwater management activities play an important role. The solution of the unsaturated-saturated subsurface hydrological flow problem including river-aquifer interaction is calculated for ten different synthetic realities where the strongly heterogeneous river bed hydraulic conductivities (L) are perfectly known. Hydraulic head data (100 in the default scenario) are sampled from the synthetic realities. In subsequent data assimilation experiments, where L is unknown now, the hydraulic head data are used as conditioning information, with help of the Ensemble Kalman Filter (EnKF). For each of the ten synthetic realities, four different ensembles of L are tested in the experiments with EnKF; one ensemble estimates high resolution L-fields with different L values for each element, and the other three ensembles estimate effective L values for 5, 3 or 2 zones. The calibration of higher resolution L-fields (i.e., fully heterogeneous or 5 zones) gives better results than the calibration of L for only 3 or 2 zones in terms of reproduction of states, stream-aquifer exchange fluxes and parameters. Effective L for a limited number of zones cannot always reproduce the true states and fluxes well and results in biased estimates of net exchange fluxes between aquifer and stream. Also in case only 10 head data are used for conditioning, the high resolution L-fields outperform the others. In case of less heterogeneous river bed hydraulic conductivities, a high-resolution characterization of L is less important. We conclude that for strongly heterogeneous river beds the commonly applied simplified representation of the streambed, with spatially homogeneous parameters or constant parameters for a few zones, might yield significant biases in the characterization of the water balance. For strongly heterogeneous river beds, we suggest to adopt a stochastic field approach to model the spatially heterogeneous river beds geostatistically. The paper illustrates that EnKF is able to calibrate such heterogeneous streambeds on the basis of hydraulic head measurements, outperforming classical approaches.

Identifying spatial priorities for protecting ecosystem services

PubMed Central

Luck, Gary W

2012-01-01

Priorities for protecting ecosystem services must be identified to ensure future human well-being. Approaches to broad-scale spatial prioritization of ecosystem services are becoming increasingly popular and are a vital precursor to identifying locations where further detailed analyses of the management of ecosystem services is required (e.g., examining trade-offs among management actions). Prioritization approaches often examine the spatial congruence between priorities for protecting ecosystem services and priorities for protecting biodiversity; therefore, the spatial prioritization method used is crucial because it will influence the alignment of service protection and conservation goals. While spatial prioritization of ecosystem services and prioritization for conservation share similarities, such as the need to document threats and costs, the former differs substantially from the latter owing to the requirement to measure the following components: supply of services; availability of human-derived alternatives to service provision; capacity to meet beneficiary demand; and site dependency in and scale of service delivery. We review studies that identify broad-scale spatial priorities for managing ecosystem services and demonstrate that researchers have used different approaches and included various measures for identifying priorities, and most studies do not consider all of the components listed above. We describe a conceptual framework for integrating each of these components into spatial prioritization of ecosystem services and illustrate our approach using a worked example for water provision. A fuller characterization of the biophysical and social context for ecosystem services that we call for should improve future prioritization and the identification of locations where ecosystem-service management is especially important or cost effective. PMID:24555017

Neural correlates of reward-based spatial learning in persons with cocaine dependence.

PubMed

Tau, Gregory Z; Marsh, Rachel; Wang, Zhishun; Torres-Sanchez, Tania; Graniello, Barbara; Hao, Xuejun; Xu, Dongrong; Packard, Mark G; Duan, Yunsuo; Kangarlu, Alayar; Martinez, Diana; Peterson, Bradley S

2014-02-01

Dysfunctional learning systems are thought to be central to the pathogenesis of and impair recovery from addictions. The functioning of the brain circuits for episodic memory or learning that support goal-directed behavior has not been studied previously in persons with cocaine dependence (CD). Thirteen abstinent CD and 13 healthy participants underwent MRI scanning while performing a task that requires the use of spatial cues to navigate a virtual-reality environment and find monetary rewards, allowing the functional assessment of the brain systems for spatial learning, a form of episodic memory. Whereas both groups performed similarly on the reward-based spatial learning task, we identified disturbances in brain regions involved in learning and reward in CD participants. In particular, CD was associated with impaired functioning of medial temporal lobe (MTL), a brain region that is crucial for spatial learning (and episodic memory) with concomitant recruitment of striatum (which normally participates in stimulus-response, or habit, learning), and prefrontal cortex. CD was also associated with enhanced sensitivity of the ventral striatum to unexpected rewards but not to expected rewards earned during spatial learning. We provide evidence that spatial learning in CD is characterized by disturbances in functioning of an MTL-based system for episodic memory and a striatum-based system for stimulus-response learning and reward. We have found additional abnormalities in distributed cortical regions. Consistent with findings from animal studies, we provide the first evidence in humans describing the disruptive effects of cocaine on the coordinated functioning of multiple neural systems for learning and memory.

Characterization of edge oscillation in a traveling-wave field-effect transistor.

PubMed

Narahara, Koichi

2013-07-01

In this study, we characterize the oscillating pulse edges developed in a traveling-wave field-effect transistor (TWFET). Recently, it has been found that a stable shock front can develop on a TWFET, which can travel in one direction only. Once the reflected pulse edge at the far end is transmitted to the input, the shock front develops and begins to travel on the device again. This process establishes a permanent edge oscillation. This paper discusses the device setup necessary to excite such oscillations and how pulse edges oscillate on a TWFET. By applying the phase reduction scheme to the transmission equations of a TWFET, we obtain phase sensitivity, which appropriately explains the measured spatial dependence of the locking range in frequency. Moreover, multiple oscillating edges can develop simultaneously, which are mutually synchronized. The dynamics of these multiple edges are also described.

Spatial characterization of Bessel-like beams for strong-field physics.

PubMed

Summers, Adam M; Yu, Xiaoming; Wang, Xinya; Raoul, Maxime; Nelson, Josh; Todd, Daniel; Zigo, Stefan; Lei, Shuting; Trallero-Herrero, Carlos A

2017-02-06

We present a compact, simple design for the generation and tuning of both the spot size and effective focal length of Bessel-like beams. In particular, this setup provides an important tool for the use of Bessel-like beams with high-power, femtosecond laser systems. Using a shallow angle axicon in conjunction with a spherical lens, we show that it is possible to focus Bessel-like modes to comparable focal spot sizes to sharp axicons while maintaining a long effective focal length. The resulting focal profiles are characterized in detail using an accurate high dynamic range imaging technique. Quantitatively, we introduce a metric (R_0.8) which defines the spot-size containing 80% of the total energy. Our setup overcomes the typical compromise between long working distances and small spot sizes. This is particularly relevant for strong-field physics where most experiments must operate in vacuum.

Effects of Initial Conditions on Shock Driven Flows

NASA Astrophysics Data System (ADS)

Martinez, Adam A.; Mula, Swathi M.; Charonko, John; Prestridge, Kathy

2017-11-01

The spatial and temporal evolution of shock-driven, variable density flows, such as the Richtmyer Meshkov (RM) instability, are strongly influenced by the initial conditions (IC's) of the flow at the time of interaction with shockwave. We study the effects of the IC's on the Vertical Shock Tube (VST) and on flows from Mach =1.2 to Mach =9. Experiments at the VST are of an Air-SF6 (At =0.6) multimode interface. Perturbations are generated using a shear layer with a flapper plate. Planar Laser Induced Fluorescence (PLIF) is used to characterize the IC's. New experiments are occurring using the Powder Gun driver at LANL Proton Radiography (pRad) facility. Mach number up to M =9 accelerate a Xenon-Helium (At =0.94) interface that is perturbed using a membrane supported by different sized grids. This presentation focuses on how to design and characterize different types of initial conditions for experiments.

Atomic-scaled characterization of graphene PN junctions

NASA Astrophysics Data System (ADS)

Zhou, Xiaodong; Wang, Dennis; Dadgar, Ali; Agnihotri, Pratik; Lee, Ji Ung; Reuter, Mark C.; Ross, Frances M.; Pasupathy, Abhay N.

Graphene p-n junctions are essential devices for studying relativistic Klein tunneling and the Veselago lensing effect in graphene. We have successfully fabricated graphene p-n junctions using both lithographically pre-patterned substrates and the stacking of vertical heterostructures. We then use our 4-probe STM system to characterize the junctions. The ability to carry out scanning electron microscopy (SEM) in our STM instrument is essential for us to locate and measure the junction interface. We obtain both the topography and dI/dV spectra at the junction area, from which we track the shift of the graphene chemical potential with position across the junction interface. This allows us to directly measure the spatial width and roughness of the junction and its potential barrier height. We will compare the junction properties of devices fabricated by the aforementioned two methods and discuss their effects on the performance as a Veselago lens.

Spatial Heterogeneity of Leaf Area Index (LAI) and Its Temporal Course on Arable Land: Combining Field Measurements, Remote Sensing and Simulation in a Comprehensive Data Analysis Approach (CDAA).

PubMed

Reichenau, Tim G; Korres, Wolfgang; Montzka, Carsten; Fiener, Peter; Wilken, Florian; Stadler, Anja; Waldhoff, Guido; Schneider, Karl

2016-01-01

The ratio of leaf area to ground area (leaf area index, LAI) is an important state variable in ecosystem studies since it influences fluxes of matter and energy between the land surface and the atmosphere. As a basis for generating temporally continuous and spatially distributed datasets of LAI, the current study contributes an analysis of its spatial variability and spatial structure. Soil-vegetation-atmosphere fluxes of water, carbon and energy are nonlinearly related to LAI. Therefore, its spatial heterogeneity, i.e., the combination of spatial variability and structure, has an effect on simulations of these fluxes. To assess LAI spatial heterogeneity, we apply a Comprehensive Data Analysis Approach that combines data from remote sensing (5 m resolution) and simulation (150 m resolution) with field measurements and a detailed land use map. Test area is the arable land in the fertile loess plain of the Rur catchment on the Germany-Belgium-Netherlands border. LAI from remote sensing and simulation compares well with field measurements. Based on the simulation results, we describe characteristic crop-specific temporal patterns of LAI spatial variability. By means of these patterns, we explain the complex multimodal frequency distributions of LAI in the remote sensing data. In the test area, variability between agricultural fields is higher than within fields. Therefore, spatial resolutions less than the 5 m of the remote sensing scenes are sufficient to infer LAI spatial variability. Frequency distributions from the simulation agree better with the multimodal distributions from remote sensing than normal distributions do. The spatial structure of LAI in the test area is dominated by a short distance referring to field sizes. Longer distances that refer to soil and weather can only be derived from remote sensing data. Therefore, simulations alone are not sufficient to characterize LAI spatial structure. It can be concluded that a comprehensive picture of LAI spatial heterogeneity and its temporal course can contribute to the development of an approach to create spatially distributed and temporally continuous datasets of LAI.

Spatial Heterogeneity of Leaf Area Index (LAI) and Its Temporal Course on Arable Land: Combining Field Measurements, Remote Sensing and Simulation in a Comprehensive Data Analysis Approach (CDAA)

PubMed Central

Korres, Wolfgang; Montzka, Carsten; Fiener, Peter; Wilken, Florian; Stadler, Anja; Waldhoff, Guido; Schneider, Karl

2016-01-01

The ratio of leaf area to ground area (leaf area index, LAI) is an important state variable in ecosystem studies since it influences fluxes of matter and energy between the land surface and the atmosphere. As a basis for generating temporally continuous and spatially distributed datasets of LAI, the current study contributes an analysis of its spatial variability and spatial structure. Soil-vegetation-atmosphere fluxes of water, carbon and energy are nonlinearly related to LAI. Therefore, its spatial heterogeneity, i.e., the combination of spatial variability and structure, has an effect on simulations of these fluxes. To assess LAI spatial heterogeneity, we apply a Comprehensive Data Analysis Approach that combines data from remote sensing (5 m resolution) and simulation (150 m resolution) with field measurements and a detailed land use map. Test area is the arable land in the fertile loess plain of the Rur catchment on the Germany-Belgium-Netherlands border. LAI from remote sensing and simulation compares well with field measurements. Based on the simulation results, we describe characteristic crop-specific temporal patterns of LAI spatial variability. By means of these patterns, we explain the complex multimodal frequency distributions of LAI in the remote sensing data. In the test area, variability between agricultural fields is higher than within fields. Therefore, spatial resolutions less than the 5 m of the remote sensing scenes are sufficient to infer LAI spatial variability. Frequency distributions from the simulation agree better with the multimodal distributions from remote sensing than normal distributions do. The spatial structure of LAI in the test area is dominated by a short distance referring to field sizes. Longer distances that refer to soil and weather can only be derived from remote sensing data. Therefore, simulations alone are not sufficient to characterize LAI spatial structure. It can be concluded that a comprehensive picture of LAI spatial heterogeneity and its temporal course can contribute to the development of an approach to create spatially distributed and temporally continuous datasets of LAI. PMID:27391858

Simultaneous quadruple modal nonlinear optical imaging for gastric diseases diagnosis and characterization

NASA Astrophysics Data System (ADS)

Wang, Zi; Zheng, Wei; Lin, Jian; Huang, Zhiwei

2015-03-01

We report the development of a unique simultaneous quadruple-modal nonlinear optical microscopy (i.e., stimulated Raman scattering (SRS), second-harmonic generation (SHG), two-photon excitation fluorescence (TPEF), and third-harmonic generation (THG)) platform for characterization of the gastric diseases (i.e., gastritis, intestinal metaplasia (IM), intestinal type adenocarcinoma). SRS highlights the goblet cells found in IM. SHG images the distribution of collagen in lamina propria. Collagen is found to aggregate for intestinal type adenocarcinoma. TPEF reveals the cell morphology and can reflect the damage inside glands caused by the diseases. THG visualizes the nuclei with high spatial resolution, which facilitates the identification of neutrophils that are usually used as a feature of inflammation. This work shows that the co-registration of quadruple-modal images can be an effective means for diagnosis and characterization of gastric diseases at the cellular and molecular levels.

Gas-water two-phase flow characterization with Electrical Resistance Tomography and Multivariate Multiscale Entropy analysis.

PubMed

Tan, Chao; Zhao, Jia; Dong, Feng

2015-03-01

Flow behavior characterization is important to understand gas-liquid two-phase flow mechanics and further establish its description model. An Electrical Resistance Tomography (ERT) provides information regarding flow conditions at different directions where the sensing electrodes implemented. We extracted the multivariate sample entropy (MSampEn) by treating ERT data as a multivariate time series. The dynamic experimental results indicate that the MSampEn is sensitive to complexity change of flow patterns including bubbly flow, stratified flow, plug flow and slug flow. MSampEn can characterize the flow behavior at different direction of two-phase flow, and reveal the transition between flow patterns when flow velocity changes. The proposed method is effective to analyze two-phase flow pattern transition by incorporating information of different scales and different spatial directions. Copyright © 2014 ISA. Published by Elsevier Ltd. All rights reserved.

Spatial arrangement of faults and opening-mode fractures

NASA Astrophysics Data System (ADS)

Laubach, S. E.; Lamarche, J.; Gauthier, B. D. M.; Dunne, W. M.; Sanderson, David J.

2018-03-01

Spatial arrangement is a fundamental characteristic of fracture arrays. The pattern of fault and opening-mode fracture positions in space defines structural heterogeneity and anisotropy in a rock volume, governs how faults and fractures affect fluid flow, and impacts our understanding of the initiation, propagation and interactions during the formation of fracture patterns. This special issue highlights recent progress with respect to characterizing and understanding the spatial arrangements of fault and fracture patterns, providing examples over a wide range of scales and structural settings. Five papers describe new methods and improvements of existing techniques to quantify spatial arrangement. One study unravels the time evolution of opening-mode fracture spatial arrangement, which are data needed to compare natural patterns with progressive fracture growth in kinematic and mechanical models. Three papers investigate the role of evolving diagenesis in localizing fractures by mechanical stratigraphy and nine discuss opening-mode fracture spatial arrangement. Two papers show the relevance of complex cluster patterns to unconventional reservoirs through examples of fractures in tight gas sandstone horizontal wells, and a study of fracture arrangement in shale. Four papers demonstrate the roles of folds in fracture localization and the development spatial patterns. One paper models along-fault friction and fluid pressure and their effects on fault-related fracture arrangement. Contributions address deformation band patterns in carbonate rocks and fault size and arrangement above a detachment fault. Three papers describe fault and fracture arrangements in basement terrains, and three document fracture patterns in shale. This collection of papers points toward improvement in field methods, continuing improvements in computer-based data analysis and creation of synthetic fracture patterns, and opportunities for further understanding fault and fracture attributes in the subsurface through coupled spatial, size, and pattern analysis.

Solutions of the Taylor-Green Vortex Problem Using High-Resolution Explicit Finite Difference Methods

NASA Technical Reports Server (NTRS)

DeBonis, James R.

2013-01-01

A computational fluid dynamics code that solves the compressible Navier-Stokes equations was applied to the Taylor-Green vortex problem to examine the code s ability to accurately simulate the vortex decay and subsequent turbulence. The code, WRLES (Wave Resolving Large-Eddy Simulation), uses explicit central-differencing to compute the spatial derivatives and explicit Low Dispersion Runge-Kutta methods for the temporal discretization. The flow was first studied and characterized using Bogey & Bailley s 13-point dispersion relation preserving (DRP) scheme. The kinetic energy dissipation rate, computed both directly and from the enstrophy field, vorticity contours, and the energy spectra are examined. Results are in excellent agreement with a reference solution obtained using a spectral method and provide insight into computations of turbulent flows. In addition the following studies were performed: a comparison of 4th-, 8th-, 12th- and DRP spatial differencing schemes, the effect of the solution filtering on the results, the effect of large-eddy simulation sub-grid scale models, and the effect of high-order discretization of the viscous terms.

The impact of signal-to-noise ratio on contextual cueing in children and adults.

PubMed

Yang, Yingying; Merrill, Edward C

2015-04-01

Contextual cueing refers to a form of implicit spatial learning where participants incidentally learn to associate a target location with its repeated spatial context. Successful contextual learning produces an efficient visual search through familiar environments. Despite the fact that children exhibit the basic ability of implicit spatial learning, their general effectiveness in this form of learning can be compromised by other development-dependent factors. Learning to extract useful information (signal) in the presence of various amounts of irrelevant or distracting information (noise) characterizes one of the most important changes that occur with cognitive development. This research investigated whether signal-to-noise ratio (S/N) affects contextual cueing differently in children and adults. S/N was operationally defined as the ratio of repeated versus new displays encountered over time. Three ratio conditions were created: high (100%), medium (67%), and low (33%) conditions. Results suggested no difference in the acquisition of contextual learning effects in the high and medium conditions across three age groups (6- to 8-year-olds, 10- to 12-year-olds, and young adults). However, a significant developmental difference emerged in the low S/N condition. As predicted, adults exhibited significant contextual cueing effects, whereas older children showed marginally significant contextual cueing and younger children did not show cueing effects. Group differences in the ability to exhibit implicit contextual learning under low S/N conditions and the implications of this difference are discussed. Copyright © 2015 Elsevier Inc. All rights reserved.

[Noopept improves the spatial memory and stimulates prefibrillar beta-amyloid(25-35) antibody production in mice].

PubMed

Bobkova, N V; Gruden', M A; Samokhin, A N; Medvinskaia, N I; Morozova-Roch, L; Uudasheva, T A; Ostrovskaia, R U; Seredinin, S B

2005-01-01

The effects of the novel proline-containing nootropic and neuroprotective dipeptide noopept (GVS-111, N-phenylacetyl-L-prolylglycine ethyl ester) were studied on NMRI mice upon olfactory bulbectomy, which had been previously shown to imitate the main morphological and biochemical signs of Alzheimer's disease (AD). The spatial memory was assessed using the Morris (water maze) test; the immunological status was characterized by ELISA with antibodies to prefibrillar beta-amyloid(25-35), S100b protein, and protofilaments of equine lysozyme, which are the molecular factors involved in the pathogenesis of AD. The control (sham-operated) animals during the Morris test preferred a sector where the safety platform was placed during the learning session. Bulbectomized animals treated with saline failed to recognize this sector, while bulbectomized animals treated with noopept (0.01 mg/kg for 21 days) restored this predominance, thus demonstrating the improvement of the spatial memory. These animals also demonstrated an increase in the level of antibodies to beta-amyloid(25-35)--the effect, which was more pronounced in the sham-operated than in bulbectomized mice. The latter demonstrated a profound decrease of immunological reactivity in a large number of tests. Noopept, stimulating the production of antibodies to beta-amyloid(25-35), can attenuate the well-known neurotoxic effects of beta-amyloid. The obtained data on the mnemotropic and immunostimulant effects noopept are indicative of good prospects for the clinical usage of this drug in the therapy of patients with neurodegenerative diseases.

Implications of the Observed Mesoscale Variations of Clouds for Earth's Radiation Budget

NASA Technical Reports Server (NTRS)

Rossow, William B.; Delo, Carl; Cairns, Brian; Hansen, James E. (Technical Monitor)

2001-01-01

The effect of small-spatial-scale cloud variations on radiative transfer in cloudy atmospheres currently receives a lot of research attention, but the available studies are not very clear about which spatial scales are important and report a very large range of estimates of the magnitude of the effects. Also, there have been no systematic investigations of how to measure and represent these cloud variations. We exploit the cloud climatology produced by the International Satellite Cloud Climatology Project (ISCCP) to: (1) define and test different methods of representing cloud variation statistics, (2) investigate the range of spatial scales that should be included, (3) characterize cloud variations over a range of space and time scales covering mesoscale (30 - 300 km, 3-12 hr) into part of the lower part of the synoptic scale (300 - 3000 km, 1-30 days), (4) obtain a climatology of the optical thickness, emissivity and cloud top temperature variability of clouds that can be used in weather and climate GCMS, together with the parameterization proposed by Cairns et al. (1999), to account for the effects of small-scale cloud variations on radiative fluxes, and (5) evaluate the effect of observed cloud variations on Earth's radiation budget. These results lead to the formulation of a revised conceptual model of clouds for use in radiative transfer calculations in GCMS. The complete variability climatology can be obtained from the ISCCP Web site at http://isccp.giss.nasa.gov.

A Microfluidics and Agent-Based Modeling Framework for Investigating Spatial Organization in Bacterial Colonies: The Case of Pseudomonas Aeruginosa and H1-Type VI Secretion Interactions.

PubMed

Wilmoth, Jared L; Doak, Peter W; Timm, Andrea; Halsted, Michelle; Anderson, John D; Ginovart, Marta; Prats, Clara; Portell, Xavier; Retterer, Scott T; Fuentes-Cabrera, Miguel

2018-01-01

The factors leading to changes in the organization of microbial assemblages at fine spatial scales are not well characterized or understood. However, they are expected to guide the succession of community development and function toward specific outcomes that could impact human health and the environment. In this study, we put forward a combined experimental and agent-based modeling framework and use it to interpret unique spatial organization patterns of H1-Type VI secretion system (T6SS) mutants of P . aeruginosa under spatial confinement. We find that key parameters, such as T6SS-mediated cell contact and lysis, spatial localization, relative species abundance, cell density and local concentrations of growth substrates and metabolites are influenced by spatial confinement. The model, written in the accessible programming language NetLogo, can be adapted to a variety of biological systems of interest and used to simulate experiments across a broad parameter space. It was implemented and run in a high-throughput mode by deploying it across multiple CPUs, with each simulation representing an individual well within a high-throughput microwell array experimental platform. The microfluidics and agent-based modeling framework we present in this paper provides an effective means by which to connect experimental studies in microbiology to model development. The work demonstrates progress in coupling experimental results to simulation while also highlighting potential sources of discrepancies between real-world experiments and idealized models.

Assessing the spatial distribution of Tuta absoluta (Lepidoptera: Gelechiidae) eggs in open-field tomato cultivation through geostatistical analysis.

PubMed

Martins, Júlio C; Picanço, Marcelo C; Silva, Ricardo S; Gonring, Alfredo Hr; Galdino, Tarcísio Vs; Guedes, Raul Nc

2018-01-01

The spatial distribution of insects is due to the interaction between individuals and the environment. Knowledge about the within-field pattern of spatial distribution of a pest is critical to planning control tactics, developing efficient sampling plans, and predicting pest damage. The leaf miner Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae) is the main pest of tomato crops in several regions of the world. Despite the importance of this pest, the pattern of spatial distribution of T. absoluta on open-field tomato cultivation remains unknown. Therefore, this study aimed to characterize the spatial distribution of T. absoluta in 22 commercial open-field tomato cultivations with plants at the three phenological development stages by using geostatistical analysis. Geostatistical analysis revealed that there was strong evidence for spatially dependent (aggregated) T. absoluta eggs in 19 of the 22 sample tomato cultivations. The maps that were obtained demonstrated the aggregated structure of egg densities at the edges of the crops. Further, T. absoluta was found to accomplish egg dispersal along the rows more frequently than it does between rows. Our results indicate that the greatest egg densities of T. absoluta occur at the edges of tomato crops. These results are discussed in relation to the behavior of T. absoluta distribution within fields and in terms of their implications for improved sampling guidelines and precision targeting control methods that are essential for effective pest monitoring and management. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

A Microfluidics and Agent-Based Modeling Framework for Investigating Spatial Organization in Bacterial Colonies: The Case of Pseudomonas Aeruginosa and H1-Type VI Secretion Interactions

PubMed Central

Wilmoth, Jared L.; Doak, Peter W.; Timm, Andrea; Halsted, Michelle; Anderson, John D.; Ginovart, Marta; Prats, Clara; Portell, Xavier; Retterer, Scott T.; Fuentes-Cabrera, Miguel

2018-01-01

The factors leading to changes in the organization of microbial assemblages at fine spatial scales are not well characterized or understood. However, they are expected to guide the succession of community development and function toward specific outcomes that could impact human health and the environment. In this study, we put forward a combined experimental and agent-based modeling framework and use it to interpret unique spatial organization patterns of H1-Type VI secretion system (T6SS) mutants of P. aeruginosa under spatial confinement. We find that key parameters, such as T6SS-mediated cell contact and lysis, spatial localization, relative species abundance, cell density and local concentrations of growth substrates and metabolites are influenced by spatial confinement. The model, written in the accessible programming language NetLogo, can be adapted to a variety of biological systems of interest and used to simulate experiments across a broad parameter space. It was implemented and run in a high-throughput mode by deploying it across multiple CPUs, with each simulation representing an individual well within a high-throughput microwell array experimental platform. The microfluidics and agent-based modeling framework we present in this paper provides an effective means by which to connect experimental studies in microbiology to model development. The work demonstrates progress in coupling experimental results to simulation while also highlighting potential sources of discrepancies between real-world experiments and idealized models. PMID:29467721

Contrasting spatial patterns in active-fire and fire-suppressed Mediterranean climate old-growth mixed conifer forests.

PubMed

Fry, Danny L; Stephens, Scott L; Collins, Brandon M; North, Malcolm P; Franco-Vizcaíno, Ernesto; Gill, Samantha J

2014-01-01

In Mediterranean environments in western North America, historic fire regimes in frequent-fire conifer forests are highly variable both temporally and spatially. This complexity influenced forest structure and spatial patterns, but some of this diversity has been lost due to anthropogenic disruption of ecosystem processes, including fire. Information from reference forest sites can help management efforts to restore forests conditions that may be more resilient to future changes in disturbance regimes and climate. In this study, we characterize tree spatial patterns using four-ha stem maps from four old-growth, Jeffrey pine-mixed conifer forests, two with active-fire regimes in northwestern Mexico and two that experienced fire exclusion in the southern Sierra Nevada. Most of the trees were in patches, averaging six to 11 trees per patch at 0.007 to 0.014 ha(-1), and occupied 27-46% of the study areas. Average canopy gap sizes (0.04 ha) covering 11-20% of the area were not significantly different among sites. The putative main effects of fire exclusion were higher densities of single trees in smaller size classes, larger proportion of trees (≥ 56%) in large patches (≥ 10 trees), and decreases in spatial complexity. While a homogenization of forest structure has been a typical result from fire exclusion, some similarities in patch, single tree, and gap attributes were maintained at these sites. These within-stand descriptions provide spatially relevant benchmarks from which to manage for structural heterogeneity in frequent-fire forest types.

A GIS-based approach to stand visualization and spatial pattern analysis in a mixed hardwood forest in West Virginia

Treesearch

Benktesh D. Sharma; Jingxin Wang; Gary Miller

2008-01-01

Tree spatial patterns were characterized for a 75-year-old mixed hardwood forest dominated by northern red oak, chestnut oak, red maple and yellow-poplar. All trees ≥5 inches diameter at breast height (d.b.h.) were measured for diameter, total height, crown height, and crown width along with their locations in the field over an area of 8 acres. The spatial...

Towards a More Biologically-meaningful Climate Characterization: Variability in Space and Time at Multiple Scales

NASA Astrophysics Data System (ADS)

Christianson, D. S.; Kaufman, C. G.; Kueppers, L. M.; Harte, J.

2013-12-01

Sampling limitations and current modeling capacity justify the common use of mean temperature values in summaries of historical climate and future projections. However, a monthly mean temperature representing a 1-km2 area on the landscape is often unable to capture the climate complexity driving organismal and ecological processes. Estimates of variability in addition to mean values are more biologically meaningful and have been shown to improve projections of range shifts for certain species. Historical analyses of variance and extreme events at coarse spatial scales, as well as coarse-scale projections, show increasing temporal variability in temperature with warmer means. Few studies have considered how spatial variance changes with warming, and analysis for both temporal and spatial variability across scales is lacking. It is unclear how the spatial variability of fine-scale conditions relevant to plant and animal individuals may change given warmer coarse-scale mean values. A change in spatial variability will affect the availability of suitable habitat on the landscape and thus, will influence future species ranges. By characterizing variability across both temporal and spatial scales, we can account for potential bias in species range projections that use coarse climate data and enable improvements to current models. In this study, we use temperature data at multiple spatial and temporal scales to characterize spatial and temporal variability under a warmer climate, i.e., increased mean temperatures. Observational data from the Sierra Nevada (California, USA), experimental climate manipulation data from the eastern and western slopes of the Rocky Mountains (Colorado, USA), projected CMIP5 data for California (USA) and observed PRISM data (USA) allow us to compare characteristics of a mean-variance relationship across spatial scales ranging from sub-meter2 to 10,000 km2 and across temporal scales ranging from hours to decades. Preliminary spatial analysis at fine-spatial scales (sub-meter to 10-meter) shows greater temperature variability with warmer mean temperatures. This is inconsistent with the inherent assumption made in current species distribution models that fine-scale variability is static, implying that current projections of future species ranges may be biased -- the direction and magnitude requiring further study. While we focus our findings on the cross-scaling characteristics of temporal and spatial variability, we also compare the mean-variance relationship between 1) experimental climate manipulations and observed conditions and 2) temporal versus spatial variance, i.e., variability in a time-series at one location vs. variability across a landscape at a single time. The former informs the rich debate concerning the ability to experimentally mimic a warmer future. The latter informs space-for-time study design and analyses, as well as species persistence via a combined spatiotemporal probability of suitable future habitat.

Clutter characterization within segmented hyperspectral imagery

NASA Astrophysics Data System (ADS)

Kacenjar, Steve T.; Hoffberg, Michael; North, Patrick

2007-10-01

Use of a Mean Class Propagation Model (MCPM) has been shown to be an effective approach in the expedient propagation of hyperspectral data scenes through the atmosphere. In this approach, real scene data are spatially subdivided into regions of common spectral properties. Each sub-region which we call a class possesses two important attributes (1) the mean spectral radiance and (2) the spectral covariance. The use of this attributes can significantly improve throughput performance of computing systems over conventional pixel-based methods. However, this approach assumes that background clutter can be approximated as having multivariate Gaussian distributions. Under such conditions, covariance propagations can be effectively performed from ground through the atmosphere. This paper explores this basic assumption using real-scene Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and examines how the partitioning of the scene into smaller and smaller segments influences local clutter characterization. It also presents a clutter characterization metric that helps explain the migration of the magnitude of statistical clutter from parent class to child sub-classes populations. It is shown that such a metric can be directly related to an approximate invariant between the parent class and its child classes.

Emergent dynamics of spatio-temporal chaos in a heterogeneous excitable medium.

PubMed

Bittihn, Philip; Berg, Sebastian; Parlitz, Ulrich; Luther, Stefan

2017-09-01

Self-organized activation patterns in excitable media such as spiral waves and spatio-temporal chaos underlie dangerous cardiac arrhythmias. While the interaction of single spiral waves with different types of heterogeneity has been studied extensively, the effect of heterogeneity on fully developed spatio-temporal chaos remains poorly understood. We investigate how the complexity and stability properties of spatio-temporal chaos in the Bär-Eiswirth model of excitable media depend on the heterogeneity of the underlying medium. We employ different measures characterizing the chaoticity of the system and find that the spatial arrangement of multiple discrete lower excitability regions has a strong impact on the complexity of the dynamics. Varying the number, shape, and spatial arrangement of the heterogeneities, we observe strong emergent effects ranging from increases in chaoticity to the complete cessation of chaos, contrasting the expectation from the homogeneous behavior. The implications of our findings for the development and treatment of arrhythmias in the heterogeneous cardiac muscle are discussed.

Emergent dynamics of spatio-temporal chaos in a heterogeneous excitable medium

NASA Astrophysics Data System (ADS)

Bittihn, Philip; Berg, Sebastian; Parlitz, Ulrich; Luther, Stefan

2017-09-01

Self-organized activation patterns in excitable media such as spiral waves and spatio-temporal chaos underlie dangerous cardiac arrhythmias. While the interaction of single spiral waves with different types of heterogeneity has been studied extensively, the effect of heterogeneity on fully developed spatio-temporal chaos remains poorly understood. We investigate how the complexity and stability properties of spatio-temporal chaos in the Bär-Eiswirth model of excitable media depend on the heterogeneity of the underlying medium. We employ different measures characterizing the chaoticity of the system and find that the spatial arrangement of multiple discrete lower excitability regions has a strong impact on the complexity of the dynamics. Varying the number, shape, and spatial arrangement of the heterogeneities, we observe strong emergent effects ranging from increases in chaoticity to the complete cessation of chaos, contrasting the expectation from the homogeneous behavior. The implications of our findings for the development and treatment of arrhythmias in the heterogeneous cardiac muscle are discussed.

Spatial spread of the West Africa Ebola epidemic.

PubMed

Kramer, Andrew M; Pulliam, J Tomlin; Alexander, Laura W; Park, Andrew W; Rohani, Pejman; Drake, John M

2016-08-01

Controlling Ebola outbreaks and planning an effective response to future emerging diseases are enhanced by understanding the role of geography in transmission. Here we show how epidemic expansion may be predicted by evaluating the relative probability of alternative epidemic paths. We compared multiple candidate models to characterize the spatial network over which the 2013-2015 West Africa epidemic of Ebola virus spread and estimate the effects of geographical covariates on transmission during peak spread. The best model was a generalized gravity model where the probability of transmission between locations depended on distance, population density and international border closures between Guinea, Liberia and Sierra Leone and neighbouring countries. This model out-performed alternative models based on diffusive spread, the force of infection, mobility estimated from cell phone records and other hypothesized patterns of spread. These findings highlight the importance of integrated geography to epidemic expansion and may contribute to identifying both the most vulnerable unaffected areas and locations of maximum intervention value.

Spatial spread of the West Africa Ebola epidemic

PubMed Central

Pulliam, J. Tomlin; Alexander, Laura W.; Rohani, Pejman; Drake, John M.

2016-01-01

Controlling Ebola outbreaks and planning an effective response to future emerging diseases are enhanced by understanding the role of geography in transmission. Here we show how epidemic expansion may be predicted by evaluating the relative probability of alternative epidemic paths. We compared multiple candidate models to characterize the spatial network over which the 2013–2015 West Africa epidemic of Ebola virus spread and estimate the effects of geographical covariates on transmission during peak spread. The best model was a generalized gravity model where the probability of transmission between locations depended on distance, population density and international border closures between Guinea, Liberia and Sierra Leone and neighbouring countries. This model out-performed alternative models based on diffusive spread, the force of infection, mobility estimated from cell phone records and other hypothesized patterns of spread. These findings highlight the importance of integrated geography to epidemic expansion and may contribute to identifying both the most vulnerable unaffected areas and locations of maximum intervention value. PMID:27853607

Improving the performance of methylene blue sensitized photopolymer by doping with nickel ion

NASA Astrophysics Data System (ADS)

Aswathy, G.; Rajesh, C. S.; Sreekumar, K.; Joseph, R.; Kartha, C. Sudha

2016-05-01

Holographic performance of an economically cheap metal ion doped photopolymer material is presented. We investigated the effect of incorporation of nickel ion into the methylene blue sensitized poly (vinyl alcohol)/acrylamide (MBPVA/AA) photopolymer system. The composition and preliminary characterization of the developed photopolymer material is reported. The presence of nickel ion improves the diffraction efficiency, stability of the material and it operates in a wide range of spatial frequencies (550-2000 lines/mm) at exposure energy of 100 mJ/cm2. When nickel ion concentration was 0.01 mM, maximum diffraction efficiency of 84% at exposure energy of 100 mJ/cm2 with spatial frequency 1335 lines/mm could be achieved for gratings recorded using wavelength of 632.8 nm. The material showed panchromaticity with more than 70% diffraction efficiency in both blue and green regions. Effects of humidity and temperature on the stored gratings were studied by keeping films in different environmental conditions. Suitability of recording large area holograms was also explored.

Early Results from the Lunar Atmosphere and Dust Environment Explorer (LADEE)

NASA Technical Reports Server (NTRS)

Elphic, R. C.; Hine, B.; Delory, G. T.; Mahaffy, Paul; Benna, Mehdi; Horanyi, Mihaly; Colaprete, Anthony; Noble, Sarah

2014-01-01

On 6 September, 2013, a near-perfect launch of the first Minotaur V rocket successfully carried NASA's Lunar Atmosphere and Dust Environment Explorer (LADEE) into a high-eccentricity geocentric orbit. After 30 days of phasing, LADEE arrived at the Moon on 6 October, 2013. LADEE's science objectives are twofold: (1) Determine the composition of the lunar atmosphere, investigate processes controlling its distribution and variability, including sources, sinks, and surface interactions; (2) Characterize the lunar exospheric dust environment, measure its spatial and temporal variability, and effects on the lunar atmosphere, if any. After a successful commissioning phase, the three science instruments have made systematic observations of the lunar dust and exospheric environment. These include initial observations of argon, neon and helium exospheres, and their diurnal variations; the lunar micrometeoroid impact ejecta cloud and its variations; spatial and temporal variations of the sodium exosphere; and the search for sunlight extinction caused by dust. LADEE also made observations of the effects of the Chang'e 3 landing on 14 December 2013.

Novel devices and systems for terahertz spectroscopy and imaging

NASA Astrophysics Data System (ADS)

Wang, Kanglin

This doctoral thesis documents my research on novel devices and systems for terahertz (THz) spectroscopy and imaging. The research is particularly focused on the manipulation of THz radiation, including subwavelength concentration and low-loss wave guiding. One of the major obstacles for THz imaging is the poor spatial resolution due to the diffraction of the long-wavelength light source. To break this restriction, we build a THz near-field microscopy system by combining apertureless near-field scanning optical microscopy (ANSOM) with terahertz time-domain spectroscopy (THz-TDS). The experimental result indicates a sub-wavelength spatial resolution of about 10 micron. Abnormal frequency response of the ANSOM probe tip is observed, and a dipole antenna model is developed to explain the bandwidth reduction of the detected THz pulses. We also observe and characterize the THz wave propagation on the near-field probe in ANSOM. These studies not only demonstrate the feasibility of ANSOM in the THz frequency range, but also provide fundamental insights into the near-field microscopy in general, such as the broadband compatibility, the propagation effects and the antenna effects. Motivated by our study of the propagation effects in THz ANSOM, we characterize the guided mode of THz pulses on a bare metal wire by directly measuring the spatial profile of electric field of the mode, and find that the wire structure can be used to guide THz waves with outstanding performance. This new broadband THz waveguide exhibits very small dispersion, extremely low attenuation and remarkable structural simplicity. These features make it especially suitable for use in THz sensing and imaging systems. The first THz endoscope is demonstrated based on metal wire waveguides. To improve the input coupling efficiency of such waveguides, we develop a photoconductive antenna with radial symmetry which can generate radially polarized THz radiation matching the waveguide mode. Through THz-TDS measurements and theoretical calculations, we study the dispersion relation of the surface waves on metal wires, which indicates the increasing importance of skin effects for surface waves in the THz frequency range.

Evaluation of fine soil moisture data from the IFloodS (NASA GPM) Ground Validation campaign using a fully-distributed ecohydrological model

NASA Astrophysics Data System (ADS)

Bastola, S.; Dialynas, Y. G.; Arnone, E.; Bras, R. L.

2014-12-01

The spatial variability of soil, vegetation, topography, and precipitation controls hydrological processes, consequently resulting in high spatio-temporal variability of most of the hydrological variables, such as soil moisture. Limitation in existing measuring system to characterize this spatial variability, and its importance in various application have resulted in a need of reconciling spatially distributed soil moisture evolution model and corresponding measurements. Fully distributed ecohydrological model simulates soil moisture at high resolution soil moisture. This is relevant for range of environmental studies e.g., flood forecasting. They can also be used to evaluate the value of space born soil moisture data, by assimilating them into hydrological models. In this study, fine resolution soil moisture data simulated by a physically-based distributed hydrological model, tRIBS-VEGGIE, is compared with soil moisture data collected during the field campaign in Turkey river basin, Iowa. The soil moisture series at the 2 and 4 inch depth exhibited a more rapid response to rainfall as compared to bottom 8 and 20 inch ones. The spatial variability in two distinct land surfaces of Turkey River, IA, reflects the control of vegetation, topography and soil texture in the characterization of spatial variability. The comparison of observed and simulated soil moisture at various depth showed that model was able to capture the dynamics of soil moisture at a number of gauging stations. Discrepancies are large in some of the gauging stations, which are characterized by rugged terrain and represented, in the model, through large computational units.

Spatial-temporal variations of seismic noise and their relation to wind, rivers, and basins in central Alaska

NASA Astrophysics Data System (ADS)

Smith, K.; Tape, C.; Bruton, C. P.; West, M. E.

2016-12-01

Continuous seismic recordings-or ambient noise-provide means for time-dependent monitoring of site conditions. Frequency-domain amplitude spectra of seismic recordings can be used to characterize time-dependent variations as a function of period (or frequency). Spatial variations can be characterized by using a set of stations across a large region. We analyze time-dependent ambient noise spectra from stations across central Alaska with three purposes. First, we are interested in monitoring the station performance and quality of a new array (FLATS) of 13 posthole seismometers near the Tanana River in Minto Flats. Second, we want to understand time-dependent threshold levels for earthquake detection: when noise is high, earthquake detections are low. Third, we are interested in identifying the effects of nature and Earth structure on seismic stations at different spatial-temporal scales. Our results show that seismic stations are sensitive to variations in wind speed and river flow. Correlations between wind speed and long-period (>10 seconds) seismic noise variations are probably due to tilt effects that have been previously documented. We identify a seismic signal at 10 Hz that is present only on stations close (<100 m) to the main channel of the Tanana river. The 10-Hz signal is strongly correlated with river gage height during summer and weakly correlated during the winter, when the river surface is covered in 1 m of ice. Spatial correlations among stations reveal large variations at shorter time scales (days); these could be due to weather anomalies. The amplitude of seismic noise at periods 2-10 s is strongly influenced by the thickness of sediment, which ranges from 0 m at bedrock sites to 6000 m at sites in the deepest part of Nenana basin. Our analysis allows us to better monitor the performance of temporary and permanent seismic stations, and to understand the physical causes of time-dependent noise variations in Alaska. Our findings show that seismic stations near rivers can potentially be used to monitor the flow of the river during summer and during ice-covered winter, raising the possibility for monitoring river ice break-up during April.

Rhetorical Scarcity: Spatial and Economic Inflections on Genre Change

ERIC Educational Resources Information Center

Applegarth, Risa

2012-01-01

This study examines how changes in a key scientific genre supported anthropology's early twentieth-century bid for scientific status. Combining spatial theories of genre with inflections from the register of economics, I develop the concept of "rhetorical scarcity" to characterize this genre change not as evolution but as manipulation that…

TEMPORAL AND SPATIAL PATTERNS OF METHANE EMISSIONS FROM A RESERVOIR DRAINING AN AGRICULTURAL WATERSHED

EPA Science Inventory

We used multiple approaches to characterize temporal and spatial patterns in methane (CH4) emissions from a mid-latitude reservoir (William H. Harsha Lake, Ohio, USA) draining an agricultural watershed. Weekly to monthly monitoring at six sites in the reservoir during a 13 month...

TEMPORAL AND SPATIAL PATTERNS OF METHANE EMISSIONS FROM A RESERVOIR DRAINING AN AGRICULTURAL WATERSHED (abstract)

EPA Science Inventory

We used multiple approaches to characterize temporal and spatial patterns in methane (CH4) emissions from a mid-latitude reservoir (William H. Harsha Lake, Ohio, USA) draining an agricultural watershed. Weekly to monthly monitoring at six sites in the reservoir during a 13 month...

Spatial probability models of fire in the desert grasslands of the southwestern USA

USDA-ARS?s Scientific Manuscript database

Fire is an important driver of ecological processes in semiarid environments; however, the role of fire in desert grasslands of the Southwestern US is controversial and the regional fire distribution is largely unknown. We characterized the spatial distribution of fire in the desert grassland region...

Assessment of Near-Source Air Pollution at a Fine Spatial Scale Utilizing Mobile Monitoring Approach

EPA Science Inventory

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle – an all-electric vehicle measuring real-time concentrations of particulate and gaseous po...

Multi-scale soil salinity mapping and monitoring with proximal and remote sensing

USDA-ARS?s Scientific Manuscript database

This talk is part of a technical short course on “Soil mapping and process modelling at diverse scales”. In the talk, guidelines, special considerations, protocols, and strengths and limitations are presented for characterizing spatial and temporal variation in soil salinity at several spatial scale...

Assessment of Near-Source Air Pollution at a Fine Spatial Scale Utilizing a Mobile Monitoring Approach

EPA Science Inventory

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle – an all-electric vehicle measuring real-time concentrations of particulate and gaseous po...

Assessment of near-source air pollution at a fine spatial scale utilizing a mobile measurement platform approach

EPA Science Inventory

Mobile monitoring is an emerging strategy to characterize spatially and temporally variable air pollution in areas near sources. EPA’s Geospatial Monitoring of Air Pollution (GMAP) vehicle, an all-electric vehicle measuring real-time concentrations of particulate and gaseous poll...

Coupling fine-scale root and canopy structure using ground-based remote sensing

Treesearch

Brady Hardiman; Christopher Gough; John Butnor; Gil Bohrer; Matteo Detto; Peter Curtis

2017-01-01

Ecosystem physical structure, defined by the quantity and spatial distribution of biomass, influences a range of ecosystem functions. Remote sensing tools permit the non-destructive characterization of canopy and root features, potentially providing opportunities to link above- and belowground structure at fine spatial resolution in...

Characterization of Spatial Memory Reconsolidation

ERIC Educational Resources Information Center

De Jaeger, Xavier; Courtey, Julie; Brus, Maïna; Artinian, Julien; Villain, Hélène; Bacquié, Elodie; Roullet, Pascal

2014-01-01

Reconsolidation is necessary for the restabilization of reactivated memory traces. However, experimental parameters have been suggested as boundary conditions for this process. Here we investigated the role of a spatial memory trace's age, strength, and update on the reconsolidation process in mice. We first found that protein synthesis is…

Role of direct electron-phonon coupling across metal-semiconductor interfaces in thermal transport via molecular dynamics.

PubMed

Lin, Keng-Hua; Strachan, Alejandro

2015-07-21

Motivated by significant interest in metal-semiconductor and metal-insulator interfaces and superlattices for energy conversion applications, we developed a molecular dynamics-based model that captures the thermal transport role of conduction electrons in metals and heat transport across these types of interface. Key features of our model, denoted eleDID (electronic version of dynamics with implicit degrees of freedom), are the natural description of interfaces and free surfaces and the ability to control the spatial extent of electron-phonon (e-ph) coupling. Non-local e-ph coupling enables the energy of conduction electrons to be transferred directly to the semiconductor/insulator phonons (as opposed to having to first couple to the phonons in the metal). We characterize the effect of the spatial e-ph coupling range on interface resistance by simulating heat transport through a metal-semiconductor interface to mimic the conditions of ultrafast laser heating experiments. Direct energy transfer from the conduction electrons to the semiconductor phonons not only decreases interfacial resistance but also increases the ballistic transport behavior in the semiconductor layer. These results provide new insight for experiments designed to characterize e-ph coupling and thermal transport at the metal-semiconductor/insulator interfaces.

Spatial resolution characterization of differential phase contrast CT systems via modulation transfer function (MTF) measurements

NASA Astrophysics Data System (ADS)

Li, Ke; Zambelli, Joseph; Bevins, Nicholas; Ge, Yongshuai; Chen, Guang-Hong

2013-06-01

By adding a Talbot-Lau interferometer to a conventional x-ray absorption computed tomography (CT) imaging system, both differential phase contrast (DPC) signal and absorption contrast signal can be simultaneously measured from the same set of CT measurements. The imaging performance of such multi-contrast x-ray CT imaging systems can be characterized with standard metrics such as noise variance, noise power spectrum, contrast-to-noise ratio, modulation transfer function (MTF), and task-based detectability index. Among these metrics, the measurement of the MTF can be challenging in DPC-CT systems due to several confounding factors such as phase wrapping and the difficulty of using fine wires as probes. To address these technical challenges, this paper discusses a viable and reliable method to experimentally measure the MTF of DPC-CT. It has been found that the spatial resolution of DPC-CT is degraded, when compared to that of the corresponding absorption CT, due to the presence of a source grating G0 in the Talbot-Lau interferometer. An effective MTF was introduced and experimentally estimated to describe the impact of the Talbot-Lau interferometer on the system MTF.

Spatial Dependence of Physical Attributes and Mechanical Properties of Ultisol in a Sugarcane Field.

PubMed

Tavares, Uilka Elisa; Rolim, Mário Monteiro; de Oliveira, Veronildo Souza; Pedrosa, Elvira Maria Regis; Siqueira, Glécio Machado; Magalhães, Adriana Guedes

2015-01-01

This study investigates the effect of conventional tillage and application of the monoculture of sugar cane on soil health. Variables like density, moisture, texture, consistency limits, and preconsolidation stress were taken as indicators of soil quality. The measurements were made at a 120 × 120 m field cropped with sugar cane under conventional tillage. The objective of this work was to characterize the soil and to study the spatial dependence of the physical and mechanical attributes. Then, undisturbed soil samples were collected to measure bulk density, moisture content and preconsolidation stress and disturbed soil samples for classification of soil texture, and consistency limits. The soil texture indicated that soil can be characterized as sandy clay soil and a sandy clay loam soil, and the consistency limits indicated that the soil presents an inorganic low plasticity clay. The preconsolidation tests tillage in soil moisture content around 19% should be avoided or should be chosen a management of soil with lighter vehicles in this moisture content, to avoid risk of compaction. Using geostatistical techniques mapping was possible to identify areas of greatest conservation soil and greater disturbance of the ground.

The value of Doppler LiDAR systems to monitor turbulence intensity during storm events in order to enhance aviation safety in Iceland

NASA Astrophysics Data System (ADS)

Yang, Shu; Nína Petersen, Guðrún; Finger, David C.

2017-04-01

Turbulence and wind shear are a major natural hazards for aviation safety in Iceland. The temporal and spatial scale of atmospheric turbulence is very dynamic, requiring an adequate method to detect and monitor turbulence with high resolution. The Doppler Light Detection and Ranging (LiDAR) system can provide continuous information about the wind field using the Doppler effect form emitted light signals. In this study, we use a Leosphere Windcube 200s LiDAR systems stationed near Reykjavik city Airport and at Keflavik International Airport, Iceland, to evaluate turbulence intensity by estimating eddy dissipation rate (EDR). For this purpose, we retrieved radial wind velocity observations from Velocity Azimuth Display (VAD) scans (360°scans at 15° and 75° elevation angle) to compute EDR. The method was used to monitor and characterize storm events in fall 2016 and the following winter. The preliminary result reveal that the LiDAR observations can detect and quantify atmospheric turbulence with high spatial and temporal resolution. This finding is an important step towards enhanced aviation safety in subpolar climate characterized by sever wind turbulence.

Spatial Dependence of Physical Attributes and Mechanical Properties of Ultisol in a Sugarcane Field

PubMed Central

Tavares, Uilka Elisa; Monteiro Rolim, Mário; Souza de Oliveira, Veronildo; Maria Regis Pedrosa, Elvira; Siqueira, Glécio Machado; Guedes Magalhães, Adriana

2015-01-01

This study investigates the effect of conventional tillage and application of the monoculture of sugar cane on soil health. Variables like density, moisture, texture, consistency limits, and preconsolidation stress were taken as indicators of soil quality. The measurements were made at a 120 × 120 m field cropped with sugar cane under conventional tillage. The objective of this work was to characterize the soil and to study the spatial dependence of the physical and mechanical attributes. Then, undisturbed soil samples were collected to measure bulk density, moisture content and preconsolidation stress and disturbed soil samples for classification of soil texture, and consistency limits. The soil texture indicated that soil can be characterized as sandy clay soil and a sandy clay loam soil, and the consistency limits indicated that the soil presents an inorganic low plasticity clay. The preconsolidation tests tillage in soil moisture content around 19% should be avoided or should be chosen a management of soil with lighter vehicles in this moisture content, to avoid risk of compaction. Using geostatistical techniques mapping was possible to identify areas of greatest conservation soil and greater disturbance of the ground. PMID:26167528

Investigation of the Geochemical Preservation of ca. 3.0 Ga Permineralized and Encapsulated Microfossils by Nanoscale Secondary Ion Mass Spectrometry

NASA Astrophysics Data System (ADS)

Delarue, Frédéric; Robert, François; Sugitani, Kenichiro; Tartèse, Romain; Duhamel, Rémi; Derenne, Sylvie

2017-12-01

Observations of Archean organic-walled microfossils suggest that their fossilization took place through both encapsulation and permineralization. In this study, we investigated microfossils from the ca. 3.0 Ga Farrel Quartzite (Pilbara, Western Australia) using transmitted light microscopy, scanning electron microscopy, Raman microspectrometry, and nanoscale secondary ion mass spectrometry (NanoSIMS) ion microprobe analyses. In contrast to previous studies, we demonstrated that permineralized microfossils were not characterized by the micrometric spatial relationships between Si and C-N as observed in thin sections. Permineralized microfossils are composed of carbonaceous globules that did not survive the acid treatment, whereas encapsulated microfossils were characterized due to their resistance to the acid maceration procedure. We also investigated the microscale relationship between the 12C14N- and 12C2- ion emission as a proxy of the N/C atomic ratio in both permineralized and encapsulated microfossils. After considering any potential matrix and microtopography effects, we demonstrate that the encapsulated microfossils exhibit the highest level of geochemical preservation. This finding shows that the chemical heterogeneity of the microfossils, observed at a spatial resolution of a few hundreds of micrometers, can be related to fossilization processes.

Digital characterization of a neuromorphic IRFPA

NASA Astrophysics Data System (ADS)

Caulfield, John T.; Fisher, John; Zadnik, Jerome A.; Mak, Ernest S.; Scribner, Dean A.

1995-05-01

This paper reports on the performance of the Neuromorphic IRFPA, the first IRFPA designed and fabricated to conduct temporal and spatial processing on the focal plane. The Neuromorphic IRFPA's unique on-chip processing capability can perform retina-like functions such as lateral inhibition and contrast enhancement, spatial and temporal filtering, image compression and edge enhancement, and logarithmic response. Previously, all evaluations of the Neuromorphic IRFPA camera have been performed on the analog video output. In the work leading up to this paper, the Neuromorphic was integrated to a digital recorder to collect quantitative laboratory and field data. This paper describes the operation and characterization of specific on-chip processes such as spatial and temporal kernel size control. The use of Neuromorphic on-chip processing in future IRFPAs is analyzed as applied to improving SNR via adaptive nonuniformity, charge handling, and dynamic range problems.

Polarization characterization of an LCTV with a Mueller matrix imaging polarimeter

NASA Astrophysics Data System (ADS)

Pezzaniti, J. Larry; Chipman, Russell A.; Gregory, Don A.

1993-10-01

The polarization properties of a TVT-6000 LCTV have been investigated. Mueller matrices of multiple ray paths through the TVT-6000 were measured for a single (typical) pixel, and through several pixels, using an imaging polarimeter. The TVT-6000 was characterized as a function of applied voltage and angle of incidence. From the Mueller matrices, the spatially dependent retardance, diattenuation, and depolarization are calculated and displayed as topographic maps. In another set of measurements, the LCTV is illuminated with a plane wave, and the spatial distribution of polarization in the Far Field Diffraction Pattern is measured in Mueller matrix form.

Method and apparatus for inspecting an EUV mask blank

DOEpatents

Goldberg, Kenneth A.

2005-11-08

An apparatus and method for at-wavelength EUV mask-blank characterization for inspection of moderate and low spatial frequency coating uniformity using a synchrotron or other source of EUV light. The apparatus provides for rapid, non-destruction, non-contact, at-wavelength qualification of large mask areas, and can be self-calibrating or be calibrated to well-characterized reference samples. It can further check for spatial variation of mask reflectivity or for global differences among masks. The apparatus and method is particularly suited for inspection of coating uniformity and quality and can detect defects in the order of 50 .mu.m and above.

Atherosclerotic plaque characterization by spatial and temporal speckle pattern analysis

NASA Astrophysics Data System (ADS)

Tearney, Guillermo J.; Bouma, Brett E.

2002-04-01

Improved methods are needed to identify the vulnerable coronary plaques responsible for acute myocardial infraction or sudden cardiac death. We describe a method for characterizing the structure and biomechanical properties of atherosclerotic plaques based on speckle pattern fluctuations. Near-field speckle images were acquired from five human aortic specimens ex vivo. The speckle decorrelation time constant varied significantly for vulnerable aortic plaques (τ = 40 ms) versus stable plaques (τ = 400 ms) and normal aorta (τ = 500 ms). These initial results indicate that different atherosclerotic plaque types may be distinguished by analysis of temporal and spatial speckle pattern fluctuations.

Characterization and imaging of nanostructured materials using tabletop extreme ultraviolet light sources

NASA Astrophysics Data System (ADS)

Karl, Robert; Knobloch, Joshua; Frazer, Travis; Tanksalvala, Michael; Porter, Christina; Bevis, Charles; Chao, Weilun; Abad Mayor, Begoña.; Adams, Daniel; Mancini, Giulia F.; Hernandez-Charpak, Jorge N.; Kapteyn, Henry; Murnane, Margaret

2018-03-01

Using a tabletop coherent extreme ultraviolet source, we extend current nanoscale metrology capabilities with applications spanning from new models of nanoscale transport and materials, to nanoscale device fabrication. We measure the ultrafast dynamics of acoustic waves in materials; by analyzing the material's response, we can extract elastic properties of films as thin as 11nm. We extend this capability to a spatially resolved imaging modality by using coherent diffractive imaging to image the acoustic waves in nanostructures as they propagate. This will allow for spatially resolved characterization of the elastic properties of non-isotropic materials.

Using High Spatial Resolution Satellite Imagery to Map Forest Burn Severity Across Spatial Scales in a Pine Barrens Ecosystem

NASA Technical Reports Server (NTRS)

Meng, Ran; Wu, Jin; Schwager, Kathy L.; Zhao, Feng; Dennison, Philip E.; Cook, Bruce D.; Brewster, Kristen; Green, Timothy M.; Serbin, Shawn P.

2017-01-01

As a primary disturbance agent, fire significantly influences local processes and services of forest ecosystems. Although a variety of remote sensing based approaches have been developed and applied to Landsat mission imagery to infer burn severity at 30 m spatial resolution, forest burn severity have still been seldom assessed at fine spatial scales (less than or equal to 5 m) from very-high-resolution (VHR) data. We assessed a 432 ha forest fire that occurred in April 2012 on Long Island, New York, within the Pine Barrens region, a unique but imperiled fire-dependent ecosystem in the northeastern United States. The mapping of forest burn severity was explored here at fine spatial scales, for the first time using remotely sensed spectral indices and a set of Multiple Endmember Spectral Mixture Analysis (MESMA) fraction images from bi-temporal - pre- and post-fire event - WorldView-2 (WV-2) imagery at 2 m spatial resolution. We first evaluated our approach using 1 m by 1 m validation points at the sub-crown scale per severity class (i.e. unburned, low, moderate, and high severity) from the post-fire 0.10 m color aerial ortho-photos; then, we validated the burn severity mapping of geo-referenced dominant tree crowns (crown scale) and 15 m by 15 m fixed-area plots (inter-crown scale) with the post-fire 0.10 m aerial ortho-photos and measured crown information of twenty forest inventory plots. Our approach can accurately assess forest burn severity at the sub-crown (overall accuracy is 84% with a Kappa value of 0.77), crown (overall accuracy is 82% with a Kappa value of 0.76), and inter-crown scales (89% of the variation in estimated burn severity ratings (i.e. Geo-Composite Burn Index (CBI)). This work highlights that forest burn severity mapping from VHR data can capture heterogeneous fire patterns at fine spatial scales over the large spatial extents. This is important since most ecological processes associated with fire effects vary at the less than 30 m scale and VHR approaches could significantly advance our ability to characterize fire effects on forest ecosystems.