Sample records for spectral dynamics analysis

  1. Sleep Neurophysiological Dynamics Through the Lens of Multitaper Spectral Analysis

    PubMed Central

    Prerau, Michael J.; Brown, Ritchie E.; Bianchi, Matt T.; Ellenbogen, Jeffrey M.; Purdon, Patrick L.

    2016-01-01

    During sleep, cortical and subcortical structures within the brain engage in highly structured oscillatory dynamics that can be observed in the electroencephalogram (EEG). The ability to accurately describe changes in sleep state from these oscillations has thus been a major goal of sleep medicine. While numerous studies over the past 50 years have shown sleep to be a continuous, multifocal, dynamic process, long-standing clinical practice categorizes sleep EEG into discrete stages through visual inspection of 30-s epochs. By representing sleep as a coarsely discretized progression of stages, vital neurophysiological information on the dynamic interplay between sleep and arousal is lost. However, by using principled time-frequency spectral analysis methods, the rich dynamics of the sleep EEG are immediately visible—elegantly depicted and quantified at time scales ranging from a full night down to individual microevents. In this paper, we review the neurophysiology of sleep through this lens of dynamic spectral analysis. We begin by reviewing spectral estimation techniques traditionally used in sleep EEG analysis and introduce multitaper spectral analysis, a method that makes EEG spectral estimates clearer and more accurate than traditional approaches. Through the lens of the multitaper spectrogram, we review the oscillations and mechanisms underlying the traditional sleep stages. In doing so, we will demonstrate how multitaper spectral analysis makes the oscillatory structure of traditional sleep states instantaneously visible, closely paralleling the traditional hypnogram, but with a richness of information that suggests novel insights into the neural mechanisms of sleep, as well as novel clinical and research applications. PMID:27927806

  2. Spectral Properties and Dynamics of Gold Nanorods Revealed by EMCCD Based Spectral-Phasor Method

    PubMed Central

    Chen, Hongtao; Digman, Michelle A.

    2015-01-01

    Gold nanorods (NRs) with tunable plasmon-resonant absorption in the near-infrared region have considerable advantages over organic fluorophores as imaging agents. However, the luminescence spectral properties of NRs have not been fully explored at the single particle level in bulk due to lack of proper analytic tools. Here we present a global spectral phasor analysis method which allows investigations of NRs' spectra at single particle level with their statistic behavior and spatial information during imaging. The wide phasor distribution obtained by the spectral phasor analysis indicates spectra of NRs are different from particle to particle. NRs with different spectra can be identified graphically in corresponding spatial images with high spectral resolution. Furthermore, spectral behaviors of NRs under different imaging conditions, e.g. different excitation powers and wavelengths, were carefully examined by our laser-scanning multiphoton microscope with spectral imaging capability. Our results prove that the spectral phasor method is an easy and efficient tool in hyper-spectral imaging analysis to unravel subtle changes of the emission spectrum. Moreover, we applied this method to study the spectral dynamics of NRs during direct optical trapping and by optothermal trapping. Interestingly, spectral shifts were observed in both trapping phenomena. PMID:25684346

  3. Spatial-temporal-spectral EEG patterns of BOLD functional network connectivity dynamics

    NASA Astrophysics Data System (ADS)

    Lamoš, Martin; Mareček, Radek; Slavíček, Tomáš; Mikl, Michal; Rektor, Ivan; Jan, Jiří

    2018-06-01

    Objective. Growing interest in the examination of large-scale brain network functional connectivity dynamics is accompanied by an effort to find the electrophysiological correlates. The commonly used constraints applied to spatial and spectral domains during electroencephalogram (EEG) data analysis may leave part of the neural activity unrecognized. We propose an approach that blindly reveals multimodal EEG spectral patterns that are related to the dynamics of the BOLD functional network connectivity. Approach. The blind decomposition of EEG spectrogram by parallel factor analysis has been shown to be a useful technique for uncovering patterns of neural activity. The simultaneously acquired BOLD fMRI data were decomposed by independent component analysis. Dynamic functional connectivity was computed on the component’s time series using a sliding window correlation, and between-network connectivity states were then defined based on the values of the correlation coefficients. ANOVA tests were performed to assess the relationships between the dynamics of between-network connectivity states and the fluctuations of EEG spectral patterns. Main results. We found three patterns related to the dynamics of between-network connectivity states. The first pattern has dominant peaks in the alpha, beta, and gamma bands and is related to the dynamics between the auditory, sensorimotor, and attentional networks. The second pattern, with dominant peaks in the theta and low alpha bands, is related to the visual and default mode network. The third pattern, also with peaks in the theta and low alpha bands, is related to the auditory and frontal network. Significance. Our previous findings revealed a relationship between EEG spectral pattern fluctuations and the hemodynamics of large-scale brain networks. In this study, we suggest that the relationship also exists at the level of functional connectivity dynamics among large-scale brain networks when no standard spatial and spectral constraints are applied on the EEG data.

  4. A solar radio dynamic spectrograph with flexible temporal-spectral resolution

    NASA Astrophysics Data System (ADS)

    Du, Qing-Fu; Chen, Lei; Zhao, Yue-Chang; Li, Xin; Zhou, Yan; Zhang, Jun-Rui; Yan, Fa-Bao; Feng, Shi-Wei; Li, Chuan-Yang; Chen, Yao

    2017-09-01

    Observation and research on solar radio emission have unique scientific values in solar and space physics and related space weather forecasting applications, since the observed spectral structures may carry important information about energetic electrons and underlying physical mechanisms. In this study, we present the design of a novel dynamic spectrograph that has been installed at the Chashan Solar Radio Observatory operated by the Laboratory for Radio Technologies, Institute of Space Sciences at Shandong University. The spectrograph is characterized by real-time storage of digitized radio intensity data in the time domain and its capability to perform off-line spectral analysis of the radio spectra. The analog signals received via antennas and amplified with a low-noise amplifier are converted into digital data at a speed reaching up to 32 k data points per millisecond. The digital data are then saved into a high-speed electronic disk for further off-line spectral analysis. Using different word lengths (1-32 k) and time cadences (5 ms-10 s) for off-line fast Fourier transform analysis, we can obtain the dynamic spectrum of a radio burst with different (user-defined) temporal (5 ms-10 s) and spectral (3 kHz˜320 kHz) resolutions. This enables great flexibility and convenience in data analysis of solar radio bursts, especially when some specific fine spectral structures are under study.

  5. Fusion of spectral models for dynamic modeling of sEMG and skeletal muscle force.

    PubMed

    Potluri, Chandrasekhar; Anugolu, Madhavi; Chiu, Steve; Urfer, Alex; Schoen, Marco P; Naidu, D Subbaram

    2012-01-01

    In this paper, we present a method of combining spectral models using a Kullback Information Criterion (KIC) data fusion algorithm. Surface Electromyographic (sEMG) signals and their corresponding skeletal muscle force signals are acquired from three sensors and pre-processed using a Half-Gaussian filter and a Chebyshev Type- II filter, respectively. Spectral models - Spectral Analysis (SPA), Empirical Transfer Function Estimate (ETFE), Spectral Analysis with Frequency Dependent Resolution (SPFRD) - are extracted from sEMG signals as input and skeletal muscle force as output signal. These signals are then employed in a System Identification (SI) routine to establish the dynamic models relating the input and output. After the individual models are extracted, the models are fused by a probability based KIC fusion algorithm. The results show that the SPFRD spectral models perform better than SPA and ETFE models in modeling the frequency content of the sEMG/skeletal muscle force data.

  6. Spectral analysis of point-vortex dynamics: first application to vortex polygons in a circular domain

    NASA Astrophysics Data System (ADS)

    Speetjens, M. F. M.; Meleshko, V. V.; van Heijst, G. J. F.

    2014-06-01

    The present study addresses the classical problem of the dynamics and stability of a cluster of N-point vortices of equal strength arranged in a polygonal configuration (‘N-vortex polygons’). In unbounded domains, such N-vortex polygons are unconditionally stable for N\\leqslant 7. Confinement in a circular domain tightens the stability conditions to N\\leqslant 6 and a maximum polygon size relative to the domain radius. This work expands on existing studies on stability and integrability by a first giving an exploratory spectral analysis of the dynamics of N vortex polygons in circular domains. Key to this is that the spectral signature of the time evolution of vortex positions reflects their qualitative behaviour. Expressing vortex motion by a generic evolution operator (the so-called Koopman operator) provides a rigorous framework for such spectral analyses. This paves the way to further differentiation and classification of point-vortex behaviour beyond stability and integrability. The concept of Koopman-based spectral analysis is demonstrated for N-vortex polygons. This reveals that conditional stability can be seen as a local form of integrability and confirms an important generic link between spectrum and dynamics: discrete spectra imply regular (quasi-periodic) motion; continuous (sub-)spectra imply chaotic motion. Moreover, this exposes rich nonlinear dynamics as intermittency between regular and chaotic motion and quasi-coherent structures formed by chaotic vortices. Dedicated to the memory of Slava Meleshko, a dear friend and inspiring colleague.

  7. Wavelength selection for portable noninvasive blood component measurement system based on spectral difference coefficient and dynamic spectrum

    NASA Astrophysics Data System (ADS)

    Feng, Ximeng; Li, Gang; Yu, Haixia; Wang, Shaohui; Yi, Xiaoqing; Lin, Ling

    2018-03-01

    Noninvasive blood component analysis by spectroscopy has been a hotspot in biomedical engineering in recent years. Dynamic spectrum provides an excellent idea for noninvasive blood component measurement, but studies have been limited to the application of broadband light sources and high-resolution spectroscopy instruments. In order to remove redundant information, a more effective wavelength selection method has been presented in this paper. In contrast to many common wavelength selection methods, this method is based on sensing mechanism which has a clear mechanism and can effectively avoid the noise from acquisition system. The spectral difference coefficient was theoretically proved to have a guiding significance for wavelength selection. After theoretical analysis, the multi-band spectral difference coefficient-wavelength selection method combining with the dynamic spectrum was proposed. An experimental analysis based on clinical trial data from 200 volunteers has been conducted to illustrate the effectiveness of this method. The extreme learning machine was used to develop the calibration models between the dynamic spectrum data and hemoglobin concentration. The experiment result shows that the prediction precision of hemoglobin concentration using multi-band spectral difference coefficient-wavelength selection method is higher compared with other methods.

  8. Spectral Dynamics Inc., ships hybrid, 316-channel data acquisition system to Sandia Labs.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schwartz, Douglas

    2003-09-01

    Spectral Dynamics announced the shipment of a 316-channel data acquisition system. The system was custom designed for the Light Initiated High Explosive (LIHE) facility at Sandia Labs in Albuquerque, New Mexico by Spectral Dynamics Advanced Research Products Group. This Spectral Dynamics data acquisition system was tailored to meet the unique LIHE environmental and testing requirements utilizing Spectral Dynamics commercial off the shelf (COTS) Jaguar and VIDAS products supplemented by SD Alliance partner's (COTS) products. 'This system is just the beginning of our cutting edge merged technology solutions,' stated Mark Remelman, Manager for the Spectral Dynamics Advanced Research Products Group. 'Thismore » Hybrid system has 316-channels of data acquisition capability, comprised of 102.4kHz direct to disk acquisition and 2.5MHz, 200Mhz & 500Mhz RAM based capabilities. In addition it incorporates the advanced bridge conditioning and dynamic configuration capabilities offered by Spectral Dynamics new Smart Interface Panel System (SIPS{trademark}).' After acceptance testing, Tony King, the Instrumentation Engineer facilitating the project for the Sandia LIHE group commented; 'The LIHE staff was very impressed with the design, construction, attention to detail and overall performance of the instrumentation system'. This system combines VIDAS, a leading edge fourth generation SD-VXI hardware and field-proven software system from SD's Advanced Research Products Group with SD's Jaguar, a multiple Acquisition Control Peripheral (ACP) system that allows expansion to hundreds of channels without sacrificing signal processing performance. Jaguar incorporates dedicated throughput disks for each ACP providing time streaming to disk at up to the maximum sample rate. Spectral Dynamics, Inc. is a leading worldwide supplier of systems and software for advanced computer-automated data acquisition, vibration testing, structural dynamics, explosive shock, high-speed transient capture, acoustic analysis, monitoring, measurement, control and backup. Spectral Dynamics products are used for research, design verification, product testing and process improvement by manufacturers of all types of electrical, electronic and mechanical products, as well as by universities and government-funded agencies. The Advanced Research Products Group is the newest addition to the Spectral Dynamics family. Their newest VXI data acquisition hardware pushes the envelope on capabilities and embodies the same rock solid design methodologies, which have always differentiated Spectral Dynamics from its competition.« less

  9. Spectral Dynamics of Resting State fMRI Within the Ventral Tegmental Area and Dorsal Raphe Nuclei in Medication-Free Major Depressive Disorder in Young Adults.

    PubMed

    Wohlschläger, Afra; Karne, Harish; Jordan, Denis; Lowe, Mark J; Jones, Stephen E; Anand, Amit

    2018-01-01

    Background: Dorsal raphe nucleus (DRN) and ventral tegmental area (VTA) are major brainstem monamine nuclei consisting of serotonin and dopamine neurons respectively. Animal studies show that firing patterns in both nuclei are altered when animals exhibit depression like behaviors. Functional MRI studies in humans have shown reduced VTA activation and DRN connectivity in depression. This study for the first time aims at investigating the functional integrity of local neuronal firing concurrently in both the VTA and DRN in vivo in humans using spectral analysis of resting state low frequency fluctuation fMRI. Method: A total of 97 medication-free subjects-67 medication-free young patients (ages 18-30) with major depressive disorder and 30 closely matched healthy controls were included in the study to detect aberrant dynamics in DRN and VTA. For the investigation of altered localized dynamics we conducted power spectral analysis and above this spectral cross correlation between the two groups. Complementary to this, spectral dependence of permutation entropy, an information theoretical measure, was compared between groups. Results: Patients displayed significant spectral slowing in VTA vs. controls ( p = 0.035, corrected). In DRN, spectral slowing was less pronounced, but the amount of slowing significantly correlated with 17-item Hamilton Depression Rating scores of depression severity ( p = 0.038). Signal complexity as assessed via permutation entropy showed spectral alterations inline with the results on spectral slowing. Conclusion: Our results indicate that altered functional dynamics of VTA and DRN in depression can be detected from regional fMRI signal. On this basis, impact of antidepressant treatment and treatment response can be assessed using these markers in future studies.

  10. Research on hyperspectral dynamic scene and image sequence simulation

    NASA Astrophysics Data System (ADS)

    Sun, Dandan; Gao, Jiaobo; Sun, Kefeng; Hu, Yu; Li, Yu; Xie, Junhu; Zhang, Lei

    2016-10-01

    This paper presents a simulation method of hyper-spectral dynamic scene and image sequence for hyper-spectral equipment evaluation and target detection algorithm. Because of high spectral resolution, strong band continuity, anti-interference and other advantages, in recent years, hyper-spectral imaging technology has been rapidly developed and is widely used in many areas such as optoelectronic target detection, military defense and remote sensing systems. Digital imaging simulation, as a crucial part of hardware in loop simulation, can be applied to testing and evaluation hyper-spectral imaging equipment with lower development cost and shorter development period. Meanwhile, visual simulation can produce a lot of original image data under various conditions for hyper-spectral image feature extraction and classification algorithm. Based on radiation physic model and material characteristic parameters this paper proposes a generation method of digital scene. By building multiple sensor models under different bands and different bandwidths, hyper-spectral scenes in visible, MWIR, LWIR band, with spectral resolution 0.01μm, 0.05μm and 0.1μm have been simulated in this paper. The final dynamic scenes have high real-time and realistic, with frequency up to 100 HZ. By means of saving all the scene gray data in the same viewpoint image sequence is obtained. The analysis results show whether in the infrared band or the visible band, the grayscale variations of simulated hyper-spectral images are consistent with the theoretical analysis results.

  11. Highly sensitive index of sympathetic activity based on time-frequency spectral analysis of electrodermal activity.

    PubMed

    Posada-Quintero, Hugo F; Florian, John P; Orjuela-Cañón, Álvaro D; Chon, Ki H

    2016-09-01

    Time-domain indices of electrodermal activity (EDA) have been used as a marker of sympathetic tone. However, they often show high variation between subjects and low consistency, which has precluded their general use as a marker of sympathetic tone. To examine whether power spectral density analysis of EDA can provide more consistent results, we recently performed a variety of sympathetic tone-evoking experiments (43). We found significant increase in the spectral power in the frequency range of 0.045 to 0.25 Hz when sympathetic tone-evoking stimuli were induced. The sympathetic tone assessed by the power spectral density of EDA was found to have lower variation and more sensitivity for certain, but not all, stimuli compared with the time-domain analysis of EDA. We surmise that this lack of sensitivity in certain sympathetic tone-inducing conditions with time-invariant spectral analysis of EDA may lie in its inability to characterize time-varying dynamics of the sympathetic tone. To overcome the disadvantages of time-domain and time-invariant power spectral indices of EDA, we developed a highly sensitive index of sympathetic tone, based on time-frequency analysis of EDA signals. Its efficacy was tested using experiments designed to elicit sympathetic dynamics. Twelve subjects underwent four tests known to elicit sympathetic tone arousal: cold pressor, tilt table, stand test, and the Stroop task. We hypothesize that a more sensitive measure of sympathetic control can be developed using time-varying spectral analysis. Variable frequency complex demodulation, a recently developed technique for time-frequency analysis, was used to obtain spectral amplitudes associated with EDA. We found that the time-varying spectral frequency band 0.08-0.24 Hz was most responsive to stimulation. Spectral power for frequencies higher than 0.24 Hz were determined to be not related to the sympathetic dynamics because they comprised less than 5% of the total power. The mean value of time-varying spectral amplitudes in the frequency band 0.08-0.24 Hz were used as the index of sympathetic tone, termed TVSymp. TVSymp was found to be overall the most sensitive to the stimuli, as evidenced by a low coefficient of variation (0.54), and higher consistency (intra-class correlation, 0.96) and sensitivity (Youden's index > 0.75), area under the receiver operating characteristic (ROC) curve (>0.8, accuracy > 0.88) compared with time-domain and time-invariant spectral indices, including heart rate variability. Copyright © 2016 the American Physiological Society.

  12. Granger causality revisited

    PubMed Central

    Friston, Karl J.; Bastos, André M.; Oswal, Ashwini; van Wijk, Bernadette; Richter, Craig; Litvak, Vladimir

    2014-01-01

    This technical paper offers a critical re-evaluation of (spectral) Granger causality measures in the analysis of biological timeseries. Using realistic (neural mass) models of coupled neuronal dynamics, we evaluate the robustness of parametric and nonparametric Granger causality. Starting from a broad class of generative (state-space) models of neuronal dynamics, we show how their Volterra kernels prescribe the second-order statistics of their response to random fluctuations; characterised in terms of cross-spectral density, cross-covariance, autoregressive coefficients and directed transfer functions. These quantities in turn specify Granger causality — providing a direct (analytic) link between the parameters of a generative model and the expected Granger causality. We use this link to show that Granger causality measures based upon autoregressive models can become unreliable when the underlying dynamics is dominated by slow (unstable) modes — as quantified by the principal Lyapunov exponent. However, nonparametric measures based on causal spectral factors are robust to dynamical instability. We then demonstrate how both parametric and nonparametric spectral causality measures can become unreliable in the presence of measurement noise. Finally, we show that this problem can be finessed by deriving spectral causality measures from Volterra kernels, estimated using dynamic causal modelling. PMID:25003817

  13. Wavelet-based spectral finite element dynamic analysis for an axially moving Timoshenko beam

    NASA Astrophysics Data System (ADS)

    Mokhtari, Ali; Mirdamadi, Hamid Reza; Ghayour, Mostafa

    2017-08-01

    In this article, wavelet-based spectral finite element (WSFE) model is formulated for time domain and wave domain dynamic analysis of an axially moving Timoshenko beam subjected to axial pretension. The formulation is similar to conventional FFT-based spectral finite element (SFE) model except that Daubechies wavelet basis functions are used for temporal discretization of the governing partial differential equations into a set of ordinary differential equations. The localized nature of Daubechies wavelet basis functions helps to rule out problems of SFE model due to periodicity assumption, especially during inverse Fourier transformation and back to time domain. The high accuracy of WSFE model is then evaluated by comparing its results with those of conventional finite element and SFE results. The effects of moving beam speed and axial tensile force on vibration and wave characteristics, and static and dynamic stabilities of moving beam are investigated.

  14. Spectral Phasor approach for fingerprinting of photo-activatable fluorescent proteins Dronpa, Kaede and KikGR

    PubMed Central

    Cutrale, Francesco; Salih, Anya; Gratton, Enrico

    2013-01-01

    The phasor global analysis algorithm is common for fluorescence lifetime applications, but has only been recently proposed for spectral analysis. Here the phasor representation and fingerprinting is exploited in its second harmonic to determine the number and spectra of photo-activated states as well as their conversion dynamics. We follow the sequence of photo-activation of proteins over time by rapidly collecting multiple spectral images. The phasor representation of the cumulative images provides easy identification of the spectral signatures of each photo-activatable protein. PMID:24040513

  15. Dynamics of modulated beams in spectral domain

    DOE PAGES

    Yampolsky, Nikolai A.

    2017-07-16

    General formalism for describing dynamics of modulated beams along linear beamlines is developed. We describe modulated beams with spectral distribution function which represents Fourier transform of the conventional beam distribution function in the 6-dimensional phase space. The introduced spectral distribution function is localized in some region of the spectral domain for nearly monochromatic modulations. It can be characterized with a small number of typical parameters such as the lowest order moments of the spectral distribution. We study evolution of the modulated beams in linear beamlines and find that characteristic spectral parameters transform linearly. The developed approach significantly simplifies analysis ofmore » various schemes proposed for seeding X-ray free electron lasers. We use this approach to study several recently proposed schemes and find the bandwidth of the output bunching in each case.« less

  16. Application of the Spectral Element Method to Acoustic Radiation

    NASA Technical Reports Server (NTRS)

    Doyle, James F.; Rizzi, Stephen A. (Technical Monitor)

    2000-01-01

    This report summarizes research to develop a capability for analysis of interior noise in enclosed structures when acoustically excited by an external random source. Of particular interest was the application to the study of noise and vibration transmission in thin-walled structures as typified by aircraft fuselages. Three related topics are focused upon. The first concerns the development of a curved frame spectral element, the second shows how the spectral element method for wave propagation in folded plate structures is extended to problems involving curved segmented plates. These are of significance because by combining these curved spectral elements with previously presented flat spectral elements, the dynamic response of geometrically complex structures can be determined. The third topic shows how spectral elements, which incorporate the effect of fluid loading on the structure, are developed for analyzing acoustic radiation from dynamically loaded extended plates.

  17. 14 CFR Appendix G to Part 25 - Continuous Gust Design Criteria

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... establishing the dynamic response of the airplane to vertical and lateral continuous turbulence unless a more... determined by dynamic analysis. The power spectral density of the atmospheric turbulence must be as given by... obtained by multiplying the Ā values determined by the dynamic analysis by the following values of the gust...

  18. 14 CFR Appendix G to Part 25 - Continuous Gust Design Criteria

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... establishing the dynamic response of the airplane to vertical and lateral continuous turbulence unless a more... determined by dynamic analysis. The power spectral density of the atmospheric turbulence must be as given by... obtained by multiplying the Ā values determined by the dynamic analysis by the following values of the gust...

  19. Dynamics of short-pulse generation via spectral filtering from intensely excited gain-switched 1.55-μm distributed-feedback laser diodes.

    PubMed

    Chen, Shaoqiang; Yoshita, Masahiro; Sato, Aya; Ito, Takashi; Akiyama, Hidefumi; Yokoyama, Hiroyuki

    2013-05-06

    Picosecond-pulse-generation dynamics and pulse-width limiting factors via spectral filtering from intensely pulse-excited gain-switched 1.55-μm distributed-feedback laser diodes were studied. The spectral and temporal characteristics of the spectrally filtered pulses indicated that the short-wavelength component stems from the initial part of the gain-switched main pulse and has a nearly linear down-chirp of 5.2 ps/nm, whereas long-wavelength components include chirped pulse-lasing components and steady-state-lasing components. Rate-equation calculations with a model of linear change in refractive index with carrier density explained the major features of the experimental results. The analysis of the expected pulse widths with optimum spectral widths was also consistent with the experimental data.

  20. Individual Sensitivity to Spectral and Temporal Cues in Listeners With Hearing Impairment

    PubMed Central

    Wright, Richard A.; Blackburn, Michael C.; Tatman, Rachael; Gallun, Frederick J.

    2015-01-01

    Purpose The present study was designed to evaluate use of spectral and temporal cues under conditions in which both types of cues were available. Method Participants included adults with normal hearing and hearing loss. We focused on 3 categories of speech cues: static spectral (spectral shape), dynamic spectral (formant change), and temporal (amplitude envelope). Spectral and/or temporal dimensions of synthetic speech were systematically manipulated along a continuum, and recognition was measured using the manipulated stimuli. Level was controlled to ensure cue audibility. Discriminant function analysis was used to determine to what degree spectral and temporal information contributed to the identification of each stimulus. Results Listeners with normal hearing were influenced to a greater extent by spectral cues for all stimuli. Listeners with hearing impairment generally utilized spectral cues when the information was static (spectral shape) but used temporal cues when the information was dynamic (formant transition). The relative use of spectral and temporal dimensions varied among individuals, especially among listeners with hearing loss. Conclusion Information about spectral and temporal cue use may aid in identifying listeners who rely to a greater extent on particular acoustic cues and applying that information toward therapeutic interventions. PMID:25629388

  1. Advanced spectral methods for climatic time series

    USGS Publications Warehouse

    Ghil, M.; Allen, M.R.; Dettinger, M.D.; Ide, K.; Kondrashov, D.; Mann, M.E.; Robertson, A.W.; Saunders, A.; Tian, Y.; Varadi, F.; Yiou, P.

    2002-01-01

    The analysis of univariate or multivariate time series provides crucial information to describe, understand, and predict climatic variability. The discovery and implementation of a number of novel methods for extracting useful information from time series has recently revitalized this classical field of study. Considerable progress has also been made in interpreting the information so obtained in terms of dynamical systems theory. In this review we describe the connections between time series analysis and nonlinear dynamics, discuss signal- to-noise enhancement, and present some of the novel methods for spectral analysis. The various steps, as well as the advantages and disadvantages of these methods, are illustrated by their application to an important climatic time series, the Southern Oscillation Index. This index captures major features of interannual climate variability and is used extensively in its prediction. Regional and global sea surface temperature data sets are used to illustrate multivariate spectral methods. Open questions and further prospects conclude the review.

  2. Karhunen-Loève treatment to remove noise and facilitate data analysis in sensing, spectroscopy and other applications.

    PubMed

    Zaharov, V V; Farahi, R H; Snyder, P J; Davison, B H; Passian, A

    2014-11-21

    Resolving weak spectral variations in the dynamic response of materials that are either dominated or excited by stochastic processes remains a challenge. Responses that are thermal in origin are particularly relevant examples due to the delocalized nature of heat. Despite its inherent properties in dealing with stochastic processes, the Karhunen-Loève expansion has not been fully exploited in measurement of systems that are driven solely by random forces or can exhibit large thermally driven random fluctuations. Here, we present experimental results and analysis of the archetypes (a) the resonant excitation and transient response of an atomic force microscope probe by the ambient random fluctuations and nanoscale photothermal sample response, and (b) the photothermally scattered photons in pump-probe spectroscopy. In each case, the dynamic process is represented as an infinite series with random coefficients to obtain pertinent frequency shifts and spectral peaks and demonstrate spectral enhancement for a set of compounds including the spectrally complex biomass. The considered cases find important applications in nanoscale material characterization, biosensing, and spectral identification of biological and chemical agents.

  3. Spectral analysis and slow spreading dynamics on complex networks.

    PubMed

    Odor, Géza

    2013-09-01

    The susceptible-infected-susceptible (SIS) model is one of the simplest memoryless systems for describing information or epidemic spreading phenomena with competing creation and spontaneous annihilation reactions. The effect of quenched disorder on the dynamical behavior has recently been compared to quenched mean-field (QMF) approximations in scale-free networks. QMF can take into account topological heterogeneity and clustering effects of the activity in the steady state by spectral decomposition analysis of the adjacency matrix. Therefore, it can provide predictions on possible rare-region effects, thus on the occurrence of slow dynamics. I compare QMF results of SIS with simulations on various large dimensional graphs. In particular, I show that for Erdős-Rényi graphs this method predicts correctly the occurrence of rare-region effects. It also provides a good estimate for the epidemic threshold in case of percolating graphs. Griffiths Phases emerge if the graph is fragmented or if we apply a strong, exponentially suppressing weighting scheme on the edges. The latter model describes the connection time distributions in the face-to-face experiments. In case of a generalized Barabási-Albert type of network with aging connections, strong rare-region effects and numerical evidence for Griffiths Phase dynamics are shown. The dynamical simulation results agree well with the predictions of the spectral analysis applied for the weighted adjacency matrices.

  4. Preliminary Geologic/spectral Analysis of LANDSAT-4 Thematic Mapper Data, Wind River/bighorn Basin Area, Wyoming

    NASA Technical Reports Server (NTRS)

    Lang, H. R.; Conel, J. E.; Paylor, E. D.

    1984-01-01

    A LIDQA evaluation for geologic applications of a LANDSAT TM scene covering the Wind River/Bighorn Basin area, Wyoming, is examined. This involves a quantitative assessment of data quality including spatial and spectral characteristics. Analysis is concentrated on the 6 visible, near infrared, and short wavelength infrared bands. Preliminary analysis demonstrates that: (1) principal component images derived from the correlation matrix provide the most useful geologic information. To extract surface spectral reflectance, the TM radiance data must be calibrated. Scatterplots demonstrate that TM data can be calibrated and sensor response is essentially linear. Low instrumental offset and gain settings result in spectral data that do not utilize the full dynamic range of the TM system.

  5. Imaging Cellular Dynamics with Spectral Relaxation Imaging Microscopy: Distinct Spectral Dynamics in Golgi Membranes of Living Cells.

    PubMed

    Lajevardipour, Alireza; Chon, James W M; Chattopadhyay, Amitabha; Clayton, Andrew H A

    2016-11-22

    Spectral relaxation from fluorescent probes is a useful technique for determining the dynamics of condensed phases. To this end, we have developed a method based on wide-field spectral fluorescence lifetime imaging microscopy to extract spectral relaxation correlation times of fluorescent probes in living cells. We show that measurement of the phase and modulation of fluorescence from two wavelengths permit the identification and determination of excited state lifetimes and spectral relaxation correlation times at a single modulation frequency. For NBD fluorescence in glycerol/water mixtures, the spectral relaxation correlation time determined by our approach exhibited good agreement with published dielectric relaxation measurements. We applied this method to determine the spectral relaxation dynamics in membranes of living cells. Measurements of the Golgi-specific C 6 -NBD-ceramide probe in living HeLa cells revealed sub-nanosecond spectral dynamics in the intracellular Golgi membrane and slower nanosecond spectral dynamics in the extracellular plasma membrane. We interpret the distinct spectral dynamics as a result of structural plasticity of the Golgi membrane relative to more rigid plasma membranes. To the best of our knowledge, these results constitute one of the first measurements of Golgi rotational dynamics.

  6. Chromophore-Dependent Intramolecular Exciton-Vibrational Coupling in the FMO Complex: Quantification and Importance for Exciton Dynamics.

    PubMed

    Padula, Daniele; Lee, Myeong H; Claridge, Kirsten; Troisi, Alessandro

    2017-11-02

    In this paper, we adopt an approach suitable for monitoring the time evolution of the intramolecular contribution to the spectral density of a set of identical chromophores embedded in their respective environments. We apply the proposed method to the Fenna-Matthews-Olson (FMO) complex, with the objective to quantify the differences among site-dependent spectral densities and the impact of such differences on the exciton dynamics of the system. Our approach takes advantage of the vertical gradient approximation to reduce the computational demands of the normal modes analysis. We show that the region of the spectral density that is believed to strongly influence the exciton dynamics changes significantly in the timescale of tens of nanoseconds. We then studied the impact of the intramolecular vibrations on the exciton dynamics by considering a model of FMO in a vibronic basis and neglecting the interaction with the environment to isolate the role of the intramolecular exciton-vibration coupling. In agreement with the assumptions in the literature, we demonstrate that high frequency modes at energy much larger than the excitonic energy splitting have negligible influence on exciton dynamics despite the large exciton-vibration coupling. We also find that the impact of including the site-dependent spectral densities on exciton dynamics is not very significant, indicating that it may be acceptable to apply the same spectral density on all sites. However, care needs to be taken for the description of the exciton-vibrational coupling in the low frequency part of intramolecular modes because exciton dynamics is more susceptible to low frequency modes despite their small Huang-Rhys factors.

  7. MR-guided dynamic PET reconstruction with the kernel method and spectral temporal basis functions

    NASA Astrophysics Data System (ADS)

    Novosad, Philip; Reader, Andrew J.

    2016-06-01

    Recent advances in dynamic positron emission tomography (PET) reconstruction have demonstrated that it is possible to achieve markedly improved end-point kinetic parameter maps by incorporating a temporal model of the radiotracer directly into the reconstruction algorithm. In this work we have developed a highly constrained, fully dynamic PET reconstruction algorithm incorporating both spectral analysis temporal basis functions and spatial basis functions derived from the kernel method applied to a co-registered T1-weighted magnetic resonance (MR) image. The dynamic PET image is modelled as a linear combination of spatial and temporal basis functions, and a maximum likelihood estimate for the coefficients can be found using the expectation-maximization (EM) algorithm. Following reconstruction, kinetic fitting using any temporal model of interest can be applied. Based on a BrainWeb T1-weighted MR phantom, we performed a realistic dynamic [18F]FDG simulation study with two noise levels, and investigated the quantitative performance of the proposed reconstruction algorithm, comparing it with reconstructions incorporating either spectral analysis temporal basis functions alone or kernel spatial basis functions alone, as well as with conventional frame-independent reconstruction. Compared to the other reconstruction algorithms, the proposed algorithm achieved superior performance, offering a decrease in spatially averaged pixel-level root-mean-square-error on post-reconstruction kinetic parametric maps in the grey/white matter, as well as in the tumours when they were present on the co-registered MR image. When the tumours were not visible in the MR image, reconstruction with the proposed algorithm performed similarly to reconstruction with spectral temporal basis functions and was superior to both conventional frame-independent reconstruction and frame-independent reconstruction with kernel spatial basis functions. Furthermore, we demonstrate that a joint spectral/kernel model can also be used for effective post-reconstruction denoising, through the use of an EM-like image-space algorithm. Finally, we applied the proposed algorithm to reconstruction of real high-resolution dynamic [11C]SCH23390 data, showing promising results.

  8. MR-guided dynamic PET reconstruction with the kernel method and spectral temporal basis functions.

    PubMed

    Novosad, Philip; Reader, Andrew J

    2016-06-21

    Recent advances in dynamic positron emission tomography (PET) reconstruction have demonstrated that it is possible to achieve markedly improved end-point kinetic parameter maps by incorporating a temporal model of the radiotracer directly into the reconstruction algorithm. In this work we have developed a highly constrained, fully dynamic PET reconstruction algorithm incorporating both spectral analysis temporal basis functions and spatial basis functions derived from the kernel method applied to a co-registered T1-weighted magnetic resonance (MR) image. The dynamic PET image is modelled as a linear combination of spatial and temporal basis functions, and a maximum likelihood estimate for the coefficients can be found using the expectation-maximization (EM) algorithm. Following reconstruction, kinetic fitting using any temporal model of interest can be applied. Based on a BrainWeb T1-weighted MR phantom, we performed a realistic dynamic [(18)F]FDG simulation study with two noise levels, and investigated the quantitative performance of the proposed reconstruction algorithm, comparing it with reconstructions incorporating either spectral analysis temporal basis functions alone or kernel spatial basis functions alone, as well as with conventional frame-independent reconstruction. Compared to the other reconstruction algorithms, the proposed algorithm achieved superior performance, offering a decrease in spatially averaged pixel-level root-mean-square-error on post-reconstruction kinetic parametric maps in the grey/white matter, as well as in the tumours when they were present on the co-registered MR image. When the tumours were not visible in the MR image, reconstruction with the proposed algorithm performed similarly to reconstruction with spectral temporal basis functions and was superior to both conventional frame-independent reconstruction and frame-independent reconstruction with kernel spatial basis functions. Furthermore, we demonstrate that a joint spectral/kernel model can also be used for effective post-reconstruction denoising, through the use of an EM-like image-space algorithm. Finally, we applied the proposed algorithm to reconstruction of real high-resolution dynamic [(11)C]SCH23390 data, showing promising results.

  9. High frequency, multi-axis dynamic stiffness analysis of a fractionally damped elastomeric isolator using continuous system theory

    NASA Astrophysics Data System (ADS)

    Fredette, Luke; Singh, Rajendra

    2017-02-01

    A spectral element approach is proposed to determine the multi-axis dynamic stiffness terms of elastomeric isolators with fractional damping over a broad range of frequencies. The dynamic properties of a class of cylindrical isolators are modeled by using the continuous system theory in terms of homogeneous rods or Timoshenko beams. The transfer matrix type dynamic stiffness expressions are developed from exact harmonic solutions given translational or rotational displacement excitations. Broadband dynamic stiffness magnitudes (say up to 5 kHz) are computationally verified for axial, torsional, shear, flexural, and coupled stiffness terms using a finite element model. Some discrepancies are found between finite element and spectral element models for the axial and flexural motions, illustrating certain limitations of each method. Experimental validation is provided for an isolator with two cylindrical elements (that work primarily in the shear mode) using dynamic measurements, as reported in the prior literature, up to 600 Hz. Superiority of the fractional damping formulation over structural or viscous damping models is illustrated via experimental validation. Finally, the strengths and limitations of the spectral element approach are briefly discussed.

  10. Broadband Structural Dynamics: Understanding the Impulse-Response of Structures Across Multiple Length and Time Scales

    DTIC Science & Technology

    2010-08-18

    Spectral domain response calculated • Time domain response obtained through inverse transform Approach 4: WASABI Wavelet Analysis of Structural Anomalies...differences at unity scale! Time Function Transform Apply Spectral Domain Transfer Function Time Function Inverse Transform Transform Transform  mtP

  11. Hierarchical Processing of Auditory Objects in Humans

    PubMed Central

    Kumar, Sukhbinder; Stephan, Klaas E; Warren, Jason D; Friston, Karl J; Griffiths, Timothy D

    2007-01-01

    This work examines the computational architecture used by the brain during the analysis of the spectral envelope of sounds, an important acoustic feature for defining auditory objects. Dynamic causal modelling and Bayesian model selection were used to evaluate a family of 16 network models explaining functional magnetic resonance imaging responses in the right temporal lobe during spectral envelope analysis. The models encode different hypotheses about the effective connectivity between Heschl's Gyrus (HG), containing the primary auditory cortex, planum temporale (PT), and superior temporal sulcus (STS), and the modulation of that coupling during spectral envelope analysis. In particular, we aimed to determine whether information processing during spectral envelope analysis takes place in a serial or parallel fashion. The analysis provides strong support for a serial architecture with connections from HG to PT and from PT to STS and an increase of the HG to PT connection during spectral envelope analysis. The work supports a computational model of auditory object processing, based on the abstraction of spectro-temporal “templates” in the PT before further analysis of the abstracted form in anterior temporal lobe areas. PMID:17542641

  12. Reduced quantum dynamics with arbitrary bath spectral densities: hierarchical equations of motion based on several different bath decomposition schemes.

    PubMed

    Liu, Hao; Zhu, Lili; Bai, Shuming; Shi, Qiang

    2014-04-07

    We investigated applications of the hierarchical equation of motion (HEOM) method to perform high order perturbation calculations of reduced quantum dynamics for a harmonic bath with arbitrary spectral densities. Three different schemes are used to decompose the bath spectral density into analytical forms that are suitable to the HEOM treatment: (1) The multiple Lorentzian mode model that can be obtained by numerically fitting the model spectral density. (2) The combined Debye and oscillatory Debye modes model that can be constructed by fitting the corresponding classical bath correlation function. (3) A new method that uses undamped harmonic oscillator modes explicitly in the HEOM formalism. Methods to extract system-bath correlations were investigated for the above bath decomposition schemes. We also show that HEOM in the undamped harmonic oscillator modes can give detailed information on the partial Wigner transform of the total density operator. Theoretical analysis and numerical simulations of the spin-Boson dynamics and the absorption line shape of molecular dimers show that the HEOM formalism for high order perturbations can serve as an important tool in studying the quantum dissipative dynamics in the intermediate coupling regime.

  13. Reduced quantum dynamics with arbitrary bath spectral densities: Hierarchical equations of motion based on several different bath decomposition schemes

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liu, Hao; Zhu, Lili; Bai, Shuming

    2014-04-07

    We investigated applications of the hierarchical equation of motion (HEOM) method to perform high order perturbation calculations of reduced quantum dynamics for a harmonic bath with arbitrary spectral densities. Three different schemes are used to decompose the bath spectral density into analytical forms that are suitable to the HEOM treatment: (1) The multiple Lorentzian mode model that can be obtained by numerically fitting the model spectral density. (2) The combined Debye and oscillatory Debye modes model that can be constructed by fitting the corresponding classical bath correlation function. (3) A new method that uses undamped harmonic oscillator modes explicitly inmore » the HEOM formalism. Methods to extract system-bath correlations were investigated for the above bath decomposition schemes. We also show that HEOM in the undamped harmonic oscillator modes can give detailed information on the partial Wigner transform of the total density operator. Theoretical analysis and numerical simulations of the spin-Boson dynamics and the absorption line shape of molecular dimers show that the HEOM formalism for high order perturbations can serve as an important tool in studying the quantum dissipative dynamics in the intermediate coupling regime.« less

  14. Coherence and population dynamics of chlorophyll excitations in FCP complex: Two-dimensional spectroscopy study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Butkus, Vytautas; Gelzinis, Andrius; Valkunas, Leonas

    2015-06-07

    Energy transfer processes and coherent phenomena in the fucoxanthin–chlorophyll protein complex, which is responsible for the light harvesting function in marine algae diatoms, were investigated at 77 K by using two-dimensional electronic spectroscopy. Experiments performed on femtosecond and picosecond timescales led to separation of spectral dynamics, witnessing evolutions of coherence and population states of the system in the spectral region of Q{sub y} transitions of chlorophylls a and c. Analysis of the coherence dynamics allowed us to identify chlorophyll (Chl) a and fucoxanthin intramolecular vibrations dominating over the first few picoseconds. Closer inspection of the spectral region of the Q{submore » y} transition of Chl c revealed previously not identified, mutually non-interacting chlorophyll c states participating in femtosecond or picosecond energy transfer to the Chl a molecules. Consideration of separated coherent and incoherent dynamics allowed us to hypothesize the vibrations-assisted coherent energy transfer between Chl c and Chl a and the overall spatial arrangement of chlorophyll molecules.« less

  15. Surface Composition of Trojan Asteroids from Thermal-Infrared Spectroscopy

    NASA Astrophysics Data System (ADS)

    Martin, A.; Emery, J. P.; Lindsay, S. S.

    2017-12-01

    Asteroid origins provide an effective means of constraining the events that dynamically shaped the solar system. Jupiter Trojan asteroids (hereafter Trojans) may help in determining the extent of radial mixing that occurred during giant planet migration. Previous studies aimed at characterizing surface composition show that Trojans have low albedo surfaces and fall into two distinct spectral groups the near infrared (NIR). Though, featureless in this spectral region, NIR spectra of Trojans either exhibit a red or less-red slope. Typically, red-sloped spectra are associated with organics, but it has been shown that Trojans are not host to much, if any, organic material. Instead, the red slope is likely due to anhydrous silicates. The thermal infrared (TIR) wavelength range has advantages for detecting silicates on low albedo asteroids such as Trojans. The 10 µm region exhibits strong features due to the Si-O fundamental molecular vibrations. We hypothesize that the two Trojan spectral groups have different compositions (silicate mineralogy). With TIR spectra from the Spitzer Space Telescope, we identify mineralogical features from the surface of 11 Trojan asteroids, five red and six less-red. Preliminary results from analysis of the 10 µm region indicate red-sloped Trojans have a higher spectral contrast compared to less-red-sloped Trojans. Fine-grain mixtures of crystalline pyroxene and olivine exhibit a 10 µm feature with sharp cutoffs between about 9 µm and 12 µm, which create a broad flat plateau. Amorphous phases, when present, smooth the sharp emission features, resulting in a dome-like shape. Further spectral analysis in the 10 µm, 18 µm, and 30 µm band region will be performed for a more robust analysis. If all Trojans come from the same region, it is expected that they share spectral and compositional characteristics. Therefore, if spectral analysis in the TIR reinforce the NIR spectral slope dichotomy, it is likely that Trojans were sourced from two different regions of the solar system. This result would provide new constraints for dynamical models that explain giant planet migration.

  16. Dynamics of absence seizures

    NASA Astrophysics Data System (ADS)

    Deeba, Farah; Sanz-Leon, Paula; Robinson, Peter

    A neural field model of the corticothalamic system is used to investigate the dynamics of absence seizures in the presence of temporally varying connection strength between the cerebral cortex and thalamus. Variation of connection strength from cortex to thalamus drives the system into seizure once a threshold is passed and a supercritical Hopf bifurcation occurs. The dynamics and spectral characteristics of the resulting seizures are explored as functions of maximum connection strength, time above threshold, and ramp rate. The results enable spectral and temporal characteristics of seizures to be related to underlying physiological variations via nonlinear dynamics and neural field theory. Notably, this analysis adds to neural field modeling of a wide variety of brain activity phenomena and measurements in recent years. Australian Research Council Grants FL1401000225 and CE140100007.

  17. An Improved Spectral Analysis Method for Fatigue Damage Assessment of Details in Liquid Cargo Tanks

    NASA Astrophysics Data System (ADS)

    Zhao, Peng-yuan; Huang, Xiao-ping

    2018-03-01

    Errors will be caused in calculating the fatigue damages of details in liquid cargo tanks by using the traditional spectral analysis method which is based on linear system, for the nonlinear relationship between the dynamic stress and the ship acceleration. An improved spectral analysis method for the assessment of the fatigue damage in detail of a liquid cargo tank is proposed in this paper. Based on assumptions that the wave process can be simulated by summing the sinusoidal waves in different frequencies and the stress process can be simulated by summing the stress processes induced by these sinusoidal waves, the stress power spectral density (PSD) is calculated by expanding the stress processes induced by the sinusoidal waves into Fourier series and adding the amplitudes of each harmonic component with the same frequency. This analysis method can take the nonlinear relationship into consideration and the fatigue damage is then calculated based on the PSD of stress. Take an independent tank in an LNG carrier for example, the accuracy of the improved spectral analysis method is proved much better than that of the traditional spectral analysis method by comparing the calculated damage results with the results calculated by the time domain method. The proposed spectral analysis method is more accurate in calculating the fatigue damages in detail of ship liquid cargo tanks.

  18. Identification of substance in complicated mixture of simulants under the action of THz radiation on the base of SDA (spectral dynamics analysis) method

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.; Krotkus, Arunas; Molis, Gediminas

    2010-10-01

    The SDA (Spectral Dynamics Analysis) - method (method of THz spectrum dynamics analysis in THz range of frequencies) is used for the detection and identification of substances with similar THz Fourier spectra (such substances are named usually as the simulants) in the two- or three-component medium. This method allows us to obtain the unique 2D THz signature of the substance - the spectrogram- and to analyze the dynamics of many spectral lines of the THz signal, passed through or reflected from substance, by one set of its integral measurements simultaneously; even measurements are made on short-term intervals (less than 20 ps). For long-term intervals (100 ps and more) the SDA method gives an opportunity to define the relaxation time for excited energy levels of molecules. This information gives new opportunity to identify the substance because the relaxation time is different for molecules of different substances. The restoration of the signal by its integral values is made on the base of SVD - Single Value Decomposition - technique. We consider three examples for PTFE mixed with small content of the L-Tartaric Acid and the Sucrose in pellets. A concentration of these substances is about 5%-10%. Our investigations show that the spectrograms and dynamics of spectral lines of THz pulse passed through the pure PTFE differ from the spectrograms of the compound medium containing PTFE and the L-Tartaric Acid or the Sucrose or both these substances together. So, it is possible to detect the presence of a small amount of the additional substances in the sample even their THz Fourier spectra are practically identical. Therefore, the SDA method can be very effective for the defense and security applications and for quality control in pharmaceutical industry. We also show that in the case of substances-simulants the use of auto- and correlation functions has much worse resolvability in a comparison with the SDA method.

  19. Terahertz Josephson spectral analysis and its applications

    NASA Astrophysics Data System (ADS)

    Snezhko, A. V.; Gundareva, I. I.; Lyatti, M. V.; Volkov, O. Y.; Pavlovskiy, V. V.; Poppe, U.; Divin, Y. Y.

    2017-04-01

    Principles of Hilbert-transform spectral analysis (HTSA) are presented and advantages of the technique in the terahertz (THz) frequency range are discussed. THz HTSA requires Josephson junctions with high values of characteristic voltages I c R n and dynamics described by a simple resistively shunted junction (RSJ) model. To meet these requirements, [001]- and [100]-tilt YBa2Cu3O7-x bicrystal junctions with deviations from the RSJ model less than 1% have been developed. Demonstrators of Hilbert-transform spectrum analyzers with various cryogenic environments, including integration into Stirling coolers, are described. Spectrum analyzers have been characterized in the spectral range from 50 GHz to 3 THz. Inside a power dynamic range of five orders, an instrumental function of the analyzers has been found to have a Lorentz form around a single frequency of 1.48 THz with a spectral resolution as low as 0.9 GHz. Spectra of THz radiation from optically pumped gas lasers and semiconductor frequency multipliers have been studied with these spectrum analyzers and the regimes of these radiation sources were optimized for a single-frequency operation. Future applications of HTSA will be related with quick and precise spectral characterization of new radiation sources and identification of substances in the THz frequency range.

  20. Scaling analyses of the spectral dimension in 3-dimensional causal dynamical triangulations

    NASA Astrophysics Data System (ADS)

    Cooperman, Joshua H.

    2018-05-01

    The spectral dimension measures the dimensionality of a space as witnessed by a diffusing random walker. Within the causal dynamical triangulations approach to the quantization of gravity (Ambjørn et al 2000 Phys. Rev. Lett. 85 347, 2001 Nucl. Phys. B 610 347, 1998 Nucl. Phys. B 536 407), the spectral dimension exhibits novel scale-dependent dynamics: reducing towards a value near 2 on sufficiently small scales, matching closely the topological dimension on intermediate scales, and decaying in the presence of positive curvature on sufficiently large scales (Ambjørn et al 2005 Phys. Rev. Lett. 95 171301, Ambjørn et al 2005 Phys. Rev. D 72 064014, Benedetti and Henson 2009 Phys. Rev. D 80 124036, Cooperman 2014 Phys. Rev. D 90 124053, Cooperman et al 2017 Class. Quantum Grav. 34 115008, Coumbe and Jurkiewicz 2015 J. High Energy Phys. JHEP03(2015)151, Kommu 2012 Class. Quantum Grav. 29 105003). I report the first comprehensive scaling analysis of the small-to-intermediate scale spectral dimension for the test case of the causal dynamical triangulations of 3-dimensional Einstein gravity. I find that the spectral dimension scales trivially with the diffusion constant. I find that the spectral dimension is completely finite in the infinite volume limit, and I argue that its maximal value is exactly consistent with the topological dimension of 3 in this limit. I find that the spectral dimension reduces further towards a value near 2 as this case’s bare coupling approaches its phase transition, and I present evidence against the conjecture that the bare coupling simply sets the overall scale of the quantum geometry (Ambjørn et al 2001 Phys. Rev. D 64 044011). On the basis of these findings, I advance a tentative physical explanation for the dynamical reduction of the spectral dimension observed within causal dynamical triangulations: branched polymeric quantum geometry on sufficiently small scales. My analyses should facilitate attempts to employ the spectral dimension as a physical observable with which to delineate renormalization group trajectories in the hope of taking a continuum limit of causal dynamical triangulations at a nontrivial ultraviolet fixed point (Ambjørn et al 2016 Phys. Rev. D 93 104032, 2014 Class. Quantum Grav. 31 165003, Cooperman 2016 Gen. Relativ. Gravit. 48 1, Cooperman 2016 arXiv:1604.01798, Coumbe and Jurkiewicz 2015 J. High Energy Phys. JHEP03(2015)151).

  1. Acoustic Database for Turbofan Engine Core-Noise Sources. I; Volume

    NASA Technical Reports Server (NTRS)

    Gordon, Grant

    2015-01-01

    In this program, a database of dynamic temperature and dynamic pressure measurements were acquired inside the core of a TECH977 turbofan engine to support investigations of indirect combustion noise. Dynamic temperature and pressure measurements were recorded for engine gas dynamics up to temperatures of 3100 degrees Fahrenheit and transient responses as high as 1000 hertz. These measurements were made at the entrance of the high pressure turbine (HPT) and at the entrance and exit of the low pressure turbine (LPT). Measurements were made at two circumferential clocking positions. In the combustor and inter-turbine duct (ITD), measurements were made at two axial locations to enable the exploration of time delays. The dynamic temperature measurements were made using dual thin-wire thermocouple probes. The dynamic pressure measurements were made using semi-infinite probes. Prior to the engine test, a series of bench, oven, and combustor rig tests were conducted to characterize the performance of the dual wire temperature probes and to define and characterize the data acquisition systems. A measurement solution for acquiring dynamic temperature and pressure data on the engine was defined. A suite of hardware modifications were designed to incorporate the dynamic temperature and pressure instrumentation into the TECH977 engine. In particular, a probe actuation system was developed to protect the delicate temperature probes during engine startup and transients in order to maximize sensor life. A set of temperature probes was procured and the TECH977 engine was assembled with the suite of new and modified hardware. The engine was tested at four steady state operating speeds, with repeats. Dynamic pressure and temperature data were acquired at each condition for at least one minute. At the two highest power settings, temperature data could not be obtained at the forward probe locations since the mean temperatures exceeded the capability of the probes. The temperature data were processed using software that accounts for the effects of convective and conductive heat transfer. The software was developed under previous NASA sponsored programs. Compensated temperature spectra and compensated time histories corresponding to the dynamic temperature of the gas stream were generated. Auto-spectral and cross-spectral analyses of the data were performed to investigate spectral features, acoustic circumferential mode content, signal coherence, and time delays. The dynamic temperature data exhibit a wideband and fairly flat spectral content. The temperature spectra do not change substantially with operating speed. The pressure spectra in the combustor and ITD exhibit generally similar shapes and amplitudes, making it difficult to identify any features that suggest the presence of indirect combustion noise. Cross-spectral analysis reveal a strong correlation between pressure and temperature fluctuations in the ITD, but little correlation between temperature fluctuations at the entrance of the HPT and pressure fluctuations downstream of it. Temperature fluctuations at the entrance of the low pressure turbine were an order of magnitude smaller than those at the entrance to the high pressure turbine. Time delay analysis of the temperature fluctuations in the combustor was inconclusive, perhaps due to the substantial mixing that occurs between the upstream and downstream locations. Time delay analysis of the temperature fluctuations in the ITD indicate that they convect at the mean flow speed. Analysis of the data did not reveal any convincing indications of the presence of indirect combustion noise. However, this analysis has been preliminary and additional exploration of the data is recommended including the use of more sophisticated signal processing to explore subtle issues that have been revealed but which are not yet fully understood or explained.

  2. CAM-SE: A scalable spectral element dynamical core for the Community Atmosphere Model.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dennis, John; Edwards, Jim; Evans, Kate J

    2012-01-01

    The Community Atmosphere Model (CAM) version 5 includes a spectral element dynamical core option from NCAR's High-Order Method Modeling Environment. It is a continuous Galerkin spectral finite element method designed for fully unstructured quadrilateral meshes. The current configurations in CAM are based on the cubed-sphere grid. The main motivation for including a spectral element dynamical core is to improve the scalability of CAM by allowing quasi-uniform grids for the sphere that do not require polar filters. In addition, the approach provides other state-of-the-art capabilities such as improved conservation properties. Spectral elements are used for the horizontal discretization, while most othermore » aspects of the dynamical core are a hybrid of well tested techniques from CAM's finite volume and global spectral dynamical core options. Here we first give a overview of the spectral element dynamical core as used in CAM. We then give scalability and performance results from CAM running with three different dynamical core options within the Community Earth System Model, using a pre-industrial time-slice configuration. We focus on high resolution simulations of 1/4 degree, 1/8 degree, and T340 spectral truncation.« less

  3. Effect of musical training on static and dynamic measures of spectral-pattern discrimination.

    PubMed

    Sheft, Stanley; Smayda, Kirsten; Shafiro, Valeriy; Maddox, W Todd; Chandrasekaran, Bharath

    2013-06-01

    Both behavioral and physiological studies have demonstrated enhanced processing of speech in challenging listening environments attributable to musical training. The relationship, however, of this benefit to auditory abilities as assessed by psychoacoustic measures remains unclear. Using tasks previously shown to relate to speech-in-noise perception, the present study evaluated discrimination ability for static and dynamic spectral patterns by 49 listeners grouped as either musicians or nonmusicians. The two static conditions measured the ability to detect a change in the phase of a logarithmic sinusoidal spectral ripple of wideband noise with ripple densities of 1.5 and 3.0 cycles per octave chosen to emphasize either timbre or pitch distinctions, respectively. The dynamic conditions assessed temporal-pattern discrimination of 1-kHz pure tones frequency modulated by different lowpass noise samples with thresholds estimated in terms of either stimulus duration or signal-to-noise ratio. Musicians performed significantly better than nonmusicians on all four tasks. Discriminant analysis showed that group membership was correctly predicted for 88% of the listeners with the structure coefficient of each measure greater than 0.51. Results suggest that enhanced processing of static and dynamic spectral patterns defined by low-rate modulation may contribute to the relationship between musical training and speech-in-noise perception. [Supported by NIH.].

  4. Analysis of wave motion in one-dimensional structures through fast-Fourier-transform-based wavelet finite element method

    NASA Astrophysics Data System (ADS)

    Shen, Wei; Li, Dongsheng; Zhang, Shuaifang; Ou, Jinping

    2017-07-01

    This paper presents a hybrid method that combines the B-spline wavelet on the interval (BSWI) finite element method and spectral analysis based on fast Fourier transform (FFT) to study wave propagation in One-Dimensional (1D) structures. BSWI scaling functions are utilized to approximate the theoretical wave solution in the spatial domain and construct a high-accuracy dynamic stiffness matrix. Dynamic reduction on element level is applied to eliminate the interior degrees of freedom of BSWI elements and substantially reduce the size of the system matrix. The dynamic equations of the system are then transformed and solved in the frequency domain through FFT-based spectral analysis which is especially suitable for parallel computation. A comparative analysis of four different finite element methods is conducted to demonstrate the validity and efficiency of the proposed method when utilized in high-frequency wave problems. Other numerical examples are utilized to simulate the influence of crack and delamination on wave propagation in 1D rods and beams. Finally, the errors caused by FFT and their corresponding solutions are presented.

  5. Dynamic fracture mechanics analysis for an edge delamination crack

    NASA Technical Reports Server (NTRS)

    Rizzi, Stephen A.; Doyle, James F.

    1994-01-01

    A global/local analysis is applied to the problem of a panel with an edge delamination crack subject to an impulse loading to ascertain the dynamic J integral. The approach uses the spectral element method to obtain the global dynamic response and local resultants to obtain the J integral. The variation of J integral along the crack front is shown. The crack behavior is mixed mode (Mode 2 and Mode 3), but is dominated by the Mode 2 behavior.

  6. Detecting Non-Markovianity of Quantum Evolution via Spectra of Dynamical Maps.

    PubMed

    Chruściński, Dariusz; Macchiavello, Chiara; Maniscalco, Sabrina

    2017-02-24

    We provide an analysis on non-Markovian quantum evolution based on the spectral properties of dynamical maps. We introduce the dynamical analog of entanglement witness to detect non-Markovianity and we illustrate its behavior with several instructive examples. It is shown that for several important classes of dynamical maps the corresponding evolution of singular values and/or eigenvalues of the map provides a simple non-Markovianity witness.

  7. Ultrafast spectral dynamics of dual-color-soliton intracavity collision in a mode-locked fiber laser

    NASA Astrophysics Data System (ADS)

    Wei, Yuan; Li, Bowen; Wei, Xiaoming; Yu, Ying; Wong, Kenneth K. Y.

    2018-02-01

    The single-shot spectral dynamics of dual-color-soliton collisions inside a mode-locked laser is experimentally and numerically investigated. By using the all-optically dispersive Fourier transform, we spectrally unveil the collision-induced soliton self-reshaping process, which features dynamic spectral fringes over the soliton main lobe, and the rebuilding of Kelly sidebands with wavelength drifting. Meanwhile, the numerical simulations validate the experimental observation and provide additional insights into the physical mechanism of the collision-induced spectral dynamics from the temporal domain perspective. It is verified that the dynamic interference between the soliton and the dispersive waves is responsible for the observed collision-induced spectral evolution. These dynamic phenomena not only demonstrate the role of dispersive waves in the sophisticated soliton interaction inside the laser cavity, but also facilitate a deeper understanding of the soliton's inherent stability.

  8. Ratiometric spectral imaging for fast tumor detection and chemotherapy monitoring in vivo

    PubMed Central

    Hwang, Jae Youn; Gross, Zeev; Gray, Harry B.; Medina-Kauwe, Lali K.; Farkas, Daniel L.

    2011-01-01

    We report a novel in vivo spectral imaging approach to cancer detection and chemotherapy assessment. We describe and characterize a ratiometric spectral imaging and analysis method and evaluate its performance for tumor detection and delineation by quantitatively monitoring the specific accumulation of targeted gallium corrole (HerGa) into HER2-positive (HER2 +) breast tumors. HerGa temporal accumulation in nude mice bearing HER2 + breast tumors was monitored comparatively by a. this new ratiometric imaging and analysis method; b. established (reflectance and fluorescence) spectral imaging; c. more commonly used fluorescence intensity imaging. We also tested the feasibility of HerGa imaging in vivo using the ratiometric spectral imaging method for tumor detection and delineation. Our results show that the new method not only provides better quantitative information than typical spectral imaging, but also better specificity than standard fluorescence intensity imaging, thus allowing enhanced in vivo outlining of tumors and dynamic, quantitative monitoring of targeted chemotherapy agent accumulation into them. PMID:21721808

  9. ANALYSIS OF YEAR 2002 SEASONAL FOREST DYNAMICS USING TIME SERIES IN SITU LAI MEASUREMENTS AND MODIS LAI SATELLITE PRODUCTS

    EPA Science Inventory

    Multitemporal satellite images are the standard basis for regional-scale land-cover (LC) change detection. However, embedded in the data are the confounding effects of vegetation dynamics (phenology). As photosynthetic vegetation progresses through its annual cycle, the spectral ...

  10. Modality-specific spectral dynamics in response to visual and tactile sequential shape information processing tasks: An MEG study using multivariate pattern classification analysis.

    PubMed

    Gohel, Bakul; Lee, Peter; Jeong, Yong

    2016-08-01

    Brain regions that respond to more than one sensory modality are characterized as multisensory regions. Studies on the processing of shape or object information have revealed recruitment of the lateral occipital cortex, posterior parietal cortex, and other regions regardless of input sensory modalities. However, it remains unknown whether such regions show similar (modality-invariant) or different (modality-specific) neural oscillatory dynamics, as recorded using magnetoencephalography (MEG), in response to identical shape information processing tasks delivered to different sensory modalities. Modality-invariant or modality-specific neural oscillatory dynamics indirectly suggest modality-independent or modality-dependent participation of particular brain regions, respectively. Therefore, this study investigated the modality-specificity of neural oscillatory dynamics in the form of spectral power modulation patterns in response to visual and tactile sequential shape-processing tasks that are well-matched in terms of speed and content between the sensory modalities. Task-related changes in spectral power modulation and differences in spectral power modulation between sensory modalities were investigated at source-space (voxel) level, using a multivariate pattern classification (MVPC) approach. Additionally, whole analyses were extended from the voxel level to the independent-component level to take account of signal leakage effects caused by inverse solution. The modality-specific spectral dynamics in multisensory and higher-order brain regions, such as the lateral occipital cortex, posterior parietal cortex, inferior temporal cortex, and other brain regions, showed task-related modulation in response to both sensory modalities. This suggests modality-dependency of such brain regions on the input sensory modality for sequential shape-information processing. Copyright © 2016 Elsevier B.V. All rights reserved.

  11. Assessing and monitoring of urban vegetation using multiple endmember spectral mixture analysis

    NASA Astrophysics Data System (ADS)

    Zoran, M. A.; Savastru, R. S.; Savastru, D. M.

    2013-08-01

    During last years urban vegetation with significant health, biological and economical values had experienced dramatic changes due to urbanization and human activities in the metropolitan area of Bucharest in Romania. We investigated the utility of remote sensing approaches of multiple endmember spectral mixture analysis (MESMA) applied to IKONOS and Landsat TM/ETM satellite data for estimating fractional cover of urban/periurban forest, parks, agricultural vegetation areas. Because of the spectral heterogeneity of same physical features of urban vegetation increases with the increase of image resolution, the traditional spectral information-based statistical method may not be useful to classify land cover dynamics from high resolution imageries like IKONOS. So we used hierarchy tree classification method in classification and MESMA for vegetation land cover dynamics assessment based on available IKONOS high-resolution imagery of Bucharest town. This study employs thirty two endmembers and six hundred and sixty spectral models to identify all Earth's features (vegetation, water, soil, impervious) and shade in the Bucharest area. The mean RMS error for the selected vegetation land cover classes range from 0.0027 to 0.018. The Pearson correlation between the fraction outputs from MESMA and reference data from all IKONOS images 1m panchromatic resolution data for urban/periurban vegetation were ranging in the domain 0.7048 - 0.8287. The framework in this study can be applied to other urban vegetation areas in Romania.

  12. Dynamic Power Spectral Analysis of Solar Measurements from Photospheric, Chromospheric, and Coronal Sources

    NASA Technical Reports Server (NTRS)

    Bouwer, S. D.; Pap, J.; Donnelly, R. F.

    1990-01-01

    An important aspect in the power spectral analysis of solar variability is the quasistationary and quasiperiodic nature of solar periodicities. In other words, the frequency, phase, and amplitude of solar periodicities vary on time scales ranging from active region lifetimes to solar cycle time scales. Here, researchers employ a dynamic, or running, power spectral density analysis to determine many periodicities and their time-varying nature in the projected area of active sunspot groups (S sub act). The Solar Maximum Mission/Active Cavity Radiometer Irradiance Monitor (SMM/ACRIM) total solar irradiance (S), the Nimbus-7 MgII center-to-wing ratio (R (MgII sub c/w)), the Ottawa 10.7 cm flux (F sub 10.7), and the GOES background x ray flux (X sub b) for the maximum, descending, and minimum portions of solar cycle 21 (i.e., 1980 to 1986) are used. The technique dramatically illustrates several previously unrecognized periodicities. For example, a relatively stable period at about 51 days has been found in those indices which are related to emerging magnetic fields. The majority of solar periodicities, particularly around 27, 150 and 300 days, are quasiperiodic because they vary in amplitude and frequency throughout the solar cycle. Finally, it is shown that there are clear differences between the power spectral densities of solar measurements from photospheric, chromospheric, and coronal sources.

  13. Moments distributions of single dye molecule spectra in a low-temperature polymer: Analysis of system ergodicity

    NASA Astrophysics Data System (ADS)

    Anikushina, T. A.; Naumov, A. V.

    2013-12-01

    This article demonstrates the principal advantages of the technique for analysis of the long-term spectral evolution of single molecules (SM) in the study of the microscopic nature of the dynamic processes in low-temperature polymers. We performed the detailed analysis of the spectral trail of single tetra-tert-butylterrylene (TBT) molecule in an amorphous polyisobutylene matrix, measured over 5 hours at T = 7K. It has been shown that the slow temporal dynamics is in qualitative agreement with the standard model of two-level systems and stochastic sudden-jump model. At the same time the distributions of the first four moments (cumulants) of the spectra of the selected SM measured at different time points were found not consistent with the standard theory prediction. It was considered as evidence that in a given time interval the system is not ergodic

  14. Vibration signature analysis of multistage gear transmission

    NASA Technical Reports Server (NTRS)

    Choy, F. K.; Tu, Y. K.; Savage, M.; Townsend, D. P.

    1989-01-01

    An analysis is presented for multistage multimesh gear transmission systems. The analysis predicts the overall system dynamics and the transmissibility to the gear box or the enclosed structure. The modal synthesis approach of the analysis treats the uncoupled lateral/torsional model characteristics of each stage or component independently. The vibration signature analysis evaluates the global dynamics coupling in the system. The method synthesizes the interaction of each modal component or stage with the nonlinear gear mesh dynamics and the modal support geometry characteristics. The analysis simulates transient and steady state vibration events to determine the resulting torque variations, speeds, changes, rotor imbalances, and support gear box motion excitations. A vibration signature analysis examines the overall dynamic characteristics of the system, and the individual model component responses. The gear box vibration analysis also examines the spectral characteristics of the support system.

  15. Spectral simplicity of apparent complexity. II. Exact complexities and complexity spectra

    NASA Astrophysics Data System (ADS)

    Riechers, Paul M.; Crutchfield, James P.

    2018-03-01

    The meromorphic functional calculus developed in Part I overcomes the nondiagonalizability of linear operators that arises often in the temporal evolution of complex systems and is generic to the metadynamics of predicting their behavior. Using the resulting spectral decomposition, we derive closed-form expressions for correlation functions, finite-length Shannon entropy-rate approximates, asymptotic entropy rate, excess entropy, transient information, transient and asymptotic state uncertainties, and synchronization information of stochastic processes generated by finite-state hidden Markov models. This introduces analytical tractability to investigating information processing in discrete-event stochastic processes, symbolic dynamics, and chaotic dynamical systems. Comparisons reveal mathematical similarities between complexity measures originally thought to capture distinct informational and computational properties. We also introduce a new kind of spectral analysis via coronal spectrograms and the frequency-dependent spectra of past-future mutual information. We analyze a number of examples to illustrate the methods, emphasizing processes with multivariate dependencies beyond pairwise correlation. This includes spectral decomposition calculations for one representative example in full detail.

  16. Comparison of Grid Nudging and Spectral Nudging Techniques for Dynamical Climate Downscaling within the WRF Model

    NASA Astrophysics Data System (ADS)

    Fan, X.; Chen, L.; Ma, Z.

    2010-12-01

    Climate downscaling has been an active research and application area in the past several decades focusing on regional climate studies. Dynamical downscaling, in addition to statistical methods, has been widely used in downscaling as the advanced modern numerical weather and regional climate models emerge. The utilization of numerical models enables that a full set of climate variables are generated in the process of downscaling, which are dynamically consistent due to the constraints of physical laws. While we are generating high resolution regional climate, the large scale climate patterns should be retained. To serve this purpose, nudging techniques, including grid analysis nudging and spectral nudging, have been used in different models. There are studies demonstrating the benefit and advantages of each nudging technique; however, the results are sensitive to many factors such as nudging coefficients and the amount of information to nudge to, and thus the conclusions are controversy. While in a companion work of developing approaches for quantitative assessment of the downscaled climate, in this study, the two nudging techniques are under extensive experiments in the Weather Research and Forecasting (WRF) model. Using the same model provides fair comparability. Applying the quantitative assessments provides objectiveness of comparison. Three types of downscaling experiments were performed for one month of choice. The first type is serving as a base whereas the large scale information is communicated through lateral boundary conditions only; the second is using the grid analysis nudging; and the third is using spectral nudging. Emphases are given to the experiments of different nudging coefficients and nudging to different variables in the grid analysis nudging; while in spectral nudging, we focus on testing the nudging coefficients, different wave numbers on different model levels to nudge.

  17. Effects of autonomic ganglion blockade on fractal and spectral components of blood pressure and heart rate variability in free-moving rats.

    PubMed

    Castiglioni, Paolo; Di Rienzo, Marco; Radaelli, Alberto

    2013-11-01

    Fractal analysis is a promising tool for assessing autonomic influences on heart rate (HR) and blood pressure (BP) variability. The temporal spectrum of scale coefficients, α(t), was recently proposed to describe the cardiovascular fractal dynamics. Aim of our work is to evaluate sympathetic influences on cardiovascular variability analyzing α(t) and spectral powers of HR and BP after ganglionic blockade. BP was recorded in 11 rats before and after autonomic blockade by hexamethonium infusion (HEX). Systolic and diastolic BP, pulse pressure and pulse interval were derived beat-by-beat. Segments longer than 5 min were selected at baseline and HEX to estimate power spectra and α(t). Comparisons were made by paired t-test. HEX reduced all spectral components of systolic and diastolic BP, the reduction being particularly significant around the frequency of Mayer waves; it induced a reduction on α(t) coefficients at t<2s and an increase on coefficients at t>8s. HEX reduced only slower components of pulse interval power spectrum, but decreased significantly faster scale coefficients (t<8s). HEX only marginally affected pulse pressure variability. Results indicate that the sympathetic outflow contributes to BP fractal dynamics with fractional Gaussian noise (α<1) at longer scales and fractional Brownian motion (α>1) at shorter scales. Ganglionic blockade also removes a fractional Brownian motion component at shorter scales from HR dynamics. Results may be explained by the characteristic time constants between sympathetic efferent activity and cardiovascular effectors. Therefore fractal analysis may complete spectral analysis with information on the correlation structure of the data. Copyright © 2013 Elsevier B.V. All rights reserved.

  18. Mapped Chebyshev Pseudo-Spectral Method for Dynamic Aero-Elastic Problem of Limit Cycle Oscillation

    NASA Astrophysics Data System (ADS)

    Im, Dong Kyun; Kim, Hyun Soon; Choi, Seongim

    2018-05-01

    A mapped Chebyshev pseudo-spectral method is developed as one of the Fourier-spectral approaches and solves nonlinear PDE systems for unsteady flows and dynamic aero-elastic problem in a given time interval, where the flows or elastic motions can be periodic, nonperiodic, or periodic with an unknown frequency. The method uses the Chebyshev polynomials of the first kind for the basis function and redistributes the standard Chebyshev-Gauss-Lobatto collocation points more evenly by a conformal mapping function for improved numerical stability. Contributions of the method are several. It can be an order of magnitude more efficient than the conventional finite difference-based, time-accurate computation, depending on the complexity of solutions and the number of collocation points. The method reformulates the dynamic aero-elastic problem in spectral form for coupled analysis of aerodynamics and structures, which can be effective for design optimization of unsteady and dynamic problems. A limit cycle oscillation (LCO) is chosen for the validation and a new method to determine the LCO frequency is introduced based on the minimization of a second derivative of the aero-elastic formulation. Two examples of the limit cycle oscillation are tested: nonlinear, one degree-of-freedom mass-spring-damper system and two degrees-of-freedom oscillating airfoil under pitch and plunge motions. Results show good agreements with those of the conventional time-accurate simulations and wind tunnel experiments.

  19. Cardiovascular dynamics during space sickness and deconditioning

    NASA Technical Reports Server (NTRS)

    Goldberger, Ary L.; Rigney, David R.

    1991-01-01

    We are currently funded by NASA for the project, 'Cardiovascular Dynamics During Space Sickness and Deconditioning.' NASA has given priority to the investigation of two problems encountered in the long-term space flights currently being planned: (1) space motion sickness; and (2) cardiovascular deconditioning. We have proposed to use spectral and nonlinear dynamical analysis of heart rate data to quantify the presence of these problems and to evaluate countermeasures against them.

  20. Supervised Learning for Dynamical System Learning.

    PubMed

    Hefny, Ahmed; Downey, Carlton; Gordon, Geoffrey J

    2015-01-01

    Recently there has been substantial interest in spectral methods for learning dynamical systems. These methods are popular since they often offer a good tradeoff between computational and statistical efficiency. Unfortunately, they can be difficult to use and extend in practice: e.g., they can make it difficult to incorporate prior information such as sparsity or structure. To address this problem, we present a new view of dynamical system learning: we show how to learn dynamical systems by solving a sequence of ordinary supervised learning problems, thereby allowing users to incorporate prior knowledge via standard techniques such as L 1 regularization. Many existing spectral methods are special cases of this new framework, using linear regression as the supervised learner. We demonstrate the effectiveness of our framework by showing examples where nonlinear regression or lasso let us learn better state representations than plain linear regression does; the correctness of these instances follows directly from our general analysis.

  1. Frequency domain modeling and dynamic characteristics evaluation of existing wind turbine systems

    NASA Astrophysics Data System (ADS)

    Chiang, Chih-Hung; Yu, Chih-Peng

    2016-04-01

    It is quite well accepted that frequency domain procedures are suitable for the design and dynamic analysis of wind turbine structures, especially for floating offshore wind turbines, since random wind loads and wave induced motions are most likely simulated in the frequency domain. This paper presents specific applications of an effective frequency domain scheme to the linear analysis of wind turbine structures in which a 1-D spectral element was developed based on the axially-loaded member. The solution schemes are summarized for the spectral analyses of the tower, the blades, and the combined system with selected frequency-dependent coupling effect from foundation-structure interactions. Numerical examples demonstrate that the modal frequencies obtained using spectral-element models are in good agreement with those found in the literature. A 5-element mono-pile model results in less than 0.3% deviation from an existing 160-element model. It is preliminarily concluded that the proposed scheme is relatively efficient in performing quick verification for test data obtained from the on-site vibration measurement using the microwave interferometer.

  2. ACCRETION FLOW DYNAMICS OF MAXI J1659-152 FROM THE SPECTRAL EVOLUTION STUDY OF ITS 2010 OUTBURST USING THE TCAF SOLUTION

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Debnath, Dipak; Molla, Aslam Ali; Chakrabarti, Sandip K.

    2015-04-20

    Transient black hole candidates are interesting objects to study in X-rays as these sources show rapid evolutions in their spectral and temporal properties. In this paper, we study the spectral properties of the Galactic transient X-ray binary MAXI J1659-152 during its very first outburst after discovery with the archival data of RXTE Proportional Counter Array instruments. We make a detailed study of the evolution of accretion flow dynamics during its 2010 outburst through spectral analysis using the Chakrabarti–Titarchuk two-component advective flow (TCAF) model as an additive table model in XSPEC. Accretion flow parameters (Keplerian disk and sub-Keplerian halo rates, shockmore » location, and shock strength) are extracted from our spectral fits with TCAF. We studied variations of these fit parameters during the entire outburst as it passed through three spectral classes: hard, hard-intermediate, and soft-intermediate. We compared our TCAF fitted results with standard combined disk blackbody (DBB) and power-law (PL) model fitted results and found that variations of disk rate with DBB flux and halo rate with PL flux are generally similar in nature. There appears to be an absence of the soft state, unlike what is seen in other similar sources.« less

  3. Robust vortex lines, vortex rings, and hopfions in three-dimensional Bose-Einstein condensates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bisset, R. N.; Wang, Wenlong; Ticknor, Christopher

    Performing a systematic Bogoliubov–de Gennes spectral analysis, we illustrate that stationary vortex lines, vortex rings, and more exotic states, such as hopfions, are robust in three-dimensional atomic Bose-Einstein condensates, for large parameter intervals. Importantly, we find that the hopfion can be stabilized in a simple parabolic trap, without the need for trap rotation or inhomogeneous interactions. We supplement our spectral analysis by studying the dynamics of such stationary states; we find them to be robust against significant perturbations of the initial state. In the unstable regimes, we not only identify the unstable mode, such as a quadrupolar or hexapolar mode,more » but we also observe the corresponding instability dynamics. Moreover, deep in the Thomas-Fermi regime, we investigate the particlelike behavior of vortex rings and hopfions.« less

  4. Robust vortex lines, vortex rings, and hopfions in three-dimensional Bose-Einstein condensates

    DOE PAGES

    Bisset, R. N.; Wang, Wenlong; Ticknor, Christopher; ...

    2015-12-07

    Performing a systematic Bogoliubov–de Gennes spectral analysis, we illustrate that stationary vortex lines, vortex rings, and more exotic states, such as hopfions, are robust in three-dimensional atomic Bose-Einstein condensates, for large parameter intervals. Importantly, we find that the hopfion can be stabilized in a simple parabolic trap, without the need for trap rotation or inhomogeneous interactions. We supplement our spectral analysis by studying the dynamics of such stationary states; we find them to be robust against significant perturbations of the initial state. In the unstable regimes, we not only identify the unstable mode, such as a quadrupolar or hexapolar mode,more » but we also observe the corresponding instability dynamics. Moreover, deep in the Thomas-Fermi regime, we investigate the particlelike behavior of vortex rings and hopfions.« less

  5. [EEG-correlates of pilots' functional condition in simulated flight dynamics].

    PubMed

    Kiroy, V N; Aslanyan, E V; Bakhtin, O M; Minyaeva, N R; Lazurenko, D M

    2015-01-01

    The spectral characteristics of the EEG recorded on two professional pilots in the simulator TU-154 aircraft in flight dynamics, including takeoff, landing and horizontal flight (in particular during difficult conditions) were analyzed. EEG recording was made with frequency band 0.1-70 Hz continuously from 15 electrodes. The EEG recordings were evaluated using analysis of variance and discriminant analysis. Statistical significant of the identified differences and the influence of the main factors and their interactions were evaluated using Greenhouse - Gaiser corrections. It was shown that the spectral characteristics of the EEG are highly informative features of the state of the pilots, reflecting the different flight phases. High validity ofthe differences including individual characteristic, indicates their non-random nature and the possibility of constructing a system of pilots' state control during all phases of flight, based on EEG features.

  6. Global sampling of the seasonal changes in vegetation biophysical properties and associated carbon flux dynamics: using the synergy of information captured by spectral time series

    NASA Astrophysics Data System (ADS)

    Campbell, P. K. E.; Huemmrich, K. F.; Middleton, E.; Voorhis, S.; Landis, D.

    2016-12-01

    Spatial heterogeneity and seasonal dynamics in vegetation function contribute significantly to the uncertainties in regional and global CO2 budgets. High spectral resolution imaging spectroscopy ( 10 nm, 400-2500 nm) provides an efficient tool for synoptic evaluation of the factors significantly affecting the ability of the vegetation to sequester carbon and to reflect radiation, due to changes in vegetation chemical and structural composition. EO-1 Hyperion has collected more than 15 years of repeated observations for vegetation studies, and currently Hyperion time series are available for study of vegetation carbon dynamics at a number of FLUX sites. This study presents results from the analysis of EO-1 Hyperion and FLUX seasonal composites for a range of ecosystems across the globe. Spectral differences and seasonal trends were evaluated for each vegetation type and specific phenology. Evaluating the relationships between CO2 flux parameters (e.g., Net ecosystem production - NEP; Gross Ecosystem Exchange - GEE, CO2 flux, μmol m-2 s-1) and spectral parameters for these very different ecosystems, high correlations were established to parameters associated with canopy water and chlorophyll content for deciduous, and photosynthetic function for conifers. Imaging spectrometry provided high spatial resolution maps of CO2 fluxes absorbed by vegetation, and was efficient in tracing seasonal flux dynamics. This study will present examples for key ecosystem tipes to demonstrate the ability of imaging spectrometry and EO-1 Hyperion to map and compare CO2 flux dynamics across the globe.

  7. A data base and analysis program for shuttle main engine dynamic pressure measurements. Appendix F: Data base plots for SSME tests 750-120 through 750-200

    NASA Technical Reports Server (NTRS)

    Coffin, T.

    1986-01-01

    A dynamic pressure data base and data base management system developed to characterize the Space Shuttle Main Engine (SSME) dynamic pressure environment is presented. The data base represents dynamic pressure measurements obtained during single engine hot firing tests of the SSME. Software is provided to permit statistical evaluation of selected measurements under specified operating conditions. An interpolation scheme is also included to estimate spectral trends with SSME power level.

  8. Dynamics of zebra finch and mockingbird vocalizations

    NASA Astrophysics Data System (ADS)

    Cimenser, Aylin

    Along with humans, whales, and bats, three groups of birds which include songbirds (oscines) such as the Zebra Finch (Taeniopygia guttata) and Mockingbird (Mimus polyglottos) are the only creatures known to learn sounds by imitation. Numerous similarities between human and songbird vocalizations exist and, recently, it has been shown that Zebra Finch in particular possesses a gene, FoxP2, known to be involved in human language. This thesis investigates song development in Zebra Finches, as well as the temporal dynamics of song in Mockingbirds. Zebra Finches have long been the system of choice for studying vocal development, ontogeny, and complexity in birdsong. Physicists find them intriguing because the spectrally complex vocalizations of the Zebra Finch can exhibit sudden transitions to chaotic dynamics, period doubling & mode-locking phenomena. Mockingbirds, by contrast, provide an ideal system to examine the richness of an avian repertoire, since these musically versatile songbirds typically know upwards of 200 songs. To analyse birdsong data, we have developed a novel clustering algorithm that can be applied to the bird's syllables, tracing their dynamics back to the earliest stages of vocal development. To characterize birdsong we have used Fourier techniques, based upon multitaper spectral analysis, to optimally work around the constraints imposed by (Heisenberg's) time-frequency uncertainty principle. Furthermore, estimates that provide optimal compromise between frequency and temporal resolution have beautiful connections with solutions to the Helmholtz wave equation in prolate spheroidal coordinates. We have used this connection to provide firm foundation for certain heuristics used in the literature to compute associated spectral derivatives and supply a pedagogical account here in this thesis. They are of interest because spectral derivatives emphasize sudden changes in the dynamics of the underlying phenomenon, and often provide a nice way to visualize such dynamics. Our Zebra Finch data consist of continuous recordings of six tutored birds from the early, plastic stages of sound production to the development of fully crystallized mature song. Our analysis reveals that well before the Zebra Finch hears adult song, identifiably distinct clusters are observable for all birds in the same regions of feature space. (Abstract shortened by UMI.)

  9. Finite grid instability and spectral fidelity of the electrostatic Particle-In-Cell algorithm

    DOE PAGES

    Huang, C. -K.; Zeng, Y.; Wang, Y.; ...

    2016-10-01

    The origin of the Finite Grid Instability (FGI) is studied by resolving the dynamics in the 1D electrostatic Particle-In-Cell (PIC) model in the spectral domain at the single particle level and at the collective motion level. The spectral fidelity of the PIC model is contrasted with the underlying physical system or the gridless model. The systematic spectral phase and amplitude errors from the charge deposition and field interpolation are quantified for common particle shapes used in the PIC models. Lastly, it is shown through such analysis and in simulations that the lack of spectral fidelity relative to the physical systemmore » due to the existence of aliased spatial modes is the major cause of the FGI in the PIC model.« less

  10. Finite grid instability and spectral fidelity of the electrostatic Particle-In-Cell algorithm

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Huang, C. -K.; Zeng, Y.; Wang, Y.

    The origin of the Finite Grid Instability (FGI) is studied by resolving the dynamics in the 1D electrostatic Particle-In-Cell (PIC) model in the spectral domain at the single particle level and at the collective motion level. The spectral fidelity of the PIC model is contrasted with the underlying physical system or the gridless model. The systematic spectral phase and amplitude errors from the charge deposition and field interpolation are quantified for common particle shapes used in the PIC models. Lastly, it is shown through such analysis and in simulations that the lack of spectral fidelity relative to the physical systemmore » due to the existence of aliased spatial modes is the major cause of the FGI in the PIC model.« less

  11. Predicting epileptic seizures from scalp EEG based on attractor state analysis.

    PubMed

    Chu, Hyunho; Chung, Chun Kee; Jeong, Woorim; Cho, Kwang-Hyun

    2017-05-01

    Epilepsy is the second most common disease of the brain. Epilepsy makes it difficult for patients to live a normal life because it is difficult to predict when seizures will occur. In this regard, if seizures could be predicted a reasonable period of time before their occurrence, epilepsy patients could take precautions against them and improve their safety and quality of life. In this paper, we investigate a novel seizure precursor based on attractor state analysis for seizure prediction. We analyze the transition process from normal to seizure attractor state and investigate a precursor phenomenon seen before reaching the seizure attractor state. From the result of an analysis, we define a quantified spectral measure in scalp EEG for seizure prediction. From scalp EEG recordings, the Fourier coefficients of six EEG frequency bands are extracted, and the defined spectral measure is computed based on the coefficients for each half-overlapped 20-second-long window. The computed spectral measure is applied to seizure prediction using a low-complexity methodology. Within scalp EEG, we identified an early-warning indicator before an epileptic seizure occurs. Getting closer to the bifurcation point that triggers the transition from normal to seizure state, the power spectral density of low frequency bands of the perturbation of an attractor in the EEG, showed a relative increase. A low-complexity seizure prediction algorithm using this feature was evaluated, using ∼583h of scalp EEG in which 143 seizures in 16 patients were recorded. With the test dataset, the proposed method showed high sensitivity (86.67%) with a false prediction rate of 0.367h -1 and average prediction time of 45.3min. A novel seizure prediction method using scalp EEG, based on attractor state analysis, shows potential for application with real epilepsy patients. This is the first study in which the seizure-precursor phenomenon of an epileptic seizure is investigated based on attractor-based analysis of the macroscopic dynamics of the brain. With the scalp EEG, we first propose use of a spectral feature identified for seizure prediction, in which the dynamics of an attractor are excluded, and only the perturbation dynamics from the attractor are considered. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Comparison of heaving buoy and oscillating flap wave energy converters

    NASA Astrophysics Data System (ADS)

    Abu Bakar, Mohd Aftar; Green, David A.; Metcalfe, Andrew V.; Najafian, G.

    2013-04-01

    Waves offer an attractive source of renewable energy, with relatively low environmental impact, for communities reasonably close to the sea. Two types of simple wave energy converters (WEC), the heaving buoy WEC and the oscillating flap WEC, are studied. Both WECs are considered as simple energy converters because they can be modelled, to a first approximation, as single degree of freedom linear dynamic systems. In this study, we estimate the response of both WECs to typical wave inputs; wave height for the buoy and corresponding wave surge for the flap, using spectral methods. A nonlinear model of the oscillating flap WEC that includes the drag force, modelled by the Morison equation is also considered. The response to a surge input is estimated by discrete time simulation (DTS), using central difference approximations to derivatives. This is compared with the response of the linear model obtained by DTS and also validated using the spectral method. Bendat's nonlinear system identification (BNLSI) technique was used to analyze the nonlinear dynamic system since the spectral analysis was only suitable for linear dynamic system. The effects of including the nonlinear term are quantified.

  13. Model-free methods to study membrane environmental probes: a comparison of the spectral phasor and generalized polarization approaches

    PubMed Central

    Malacrida, Leonel; Gratton, Enrico; Jameson, David M

    2016-01-01

    In this note, we present a discussion of the advantages and scope of model-free analysis methods applied to the popular solvatochromic probe LAURDAN, which is widely used as an environmental probe to study dynamics and structure in membranes. In particular, we compare and contrast the generalized polarization approach with the spectral phasor approach. To illustrate our points we utilize several model membrane systems containing pure lipid phases and, in some cases, cholesterol or surfactants. We demonstrate that the spectral phasor method offers definitive advantages in the case of complex systems. PMID:27182438

  14. Spectral density mapping at multiple magnetic fields suitable for 13C NMR relaxation studies

    NASA Astrophysics Data System (ADS)

    Kadeřávek, Pavel; Zapletal, Vojtěch; Fiala, Radovan; Srb, Pavel; Padrta, Petr; Přecechtělová, Jana Pavlíková; Šoltésová, Mária; Kowalewski, Jozef; Widmalm, Göran; Chmelík, Josef; Sklenář, Vladimír; Žídek, Lukáš

    2016-05-01

    Standard spectral density mapping protocols, well suited for the analysis of 15N relaxation rates, introduce significant systematic errors when applied to 13C relaxation data, especially if the dynamics is dominated by motions with short correlation times (small molecules, dynamic residues of macromolecules). A possibility to improve the accuracy by employing cross-correlated relaxation rates and on measurements taken at several magnetic fields has been examined. A suite of protocols for analyzing such data has been developed and their performance tested. Applicability of the proposed protocols is documented in two case studies, spectral density mapping of a uniformly labeled RNA hairpin and of a selectively labeled disaccharide exhibiting highly anisotropic tumbling. Combination of auto- and cross-correlated relaxation data acquired at three magnetic fields was applied in the former case in order to separate effects of fast motions and conformational or chemical exchange. An approach using auto-correlated relaxation rates acquired at five magnetic fields, applicable to anisotropically moving molecules, was used in the latter case. The results were compared with a more advanced analysis of data obtained by interpolation of auto-correlated relaxation rates measured at seven magnetic fields, and with the spectral density mapping of cross-correlated relaxation rates. The results showed that sufficiently accurate values of auto- and cross-correlated spectral density functions at zero and 13C frequencies can be obtained from data acquired at three magnetic fields for uniformly 13C -labeled molecules with a moderate anisotropy of the rotational diffusion tensor. Analysis of auto-correlated relaxation rates at five magnetic fields represents an alternative for molecules undergoing highly anisotropic motions.

  15. Linearized spectrum correlation analysis for line emission measurements

    NASA Astrophysics Data System (ADS)

    Nishizawa, T.; Nornberg, M. D.; Den Hartog, D. J.; Sarff, J. S.

    2017-08-01

    A new spectral analysis method, Linearized Spectrum Correlation Analysis (LSCA), for charge exchange and passive ion Doppler spectroscopy is introduced to provide a means of measuring fast spectral line shape changes associated with ion-scale micro-instabilities. This analysis method is designed to resolve the fluctuations in the emission line shape from a stationary ion-scale wave. The method linearizes the fluctuations around a time-averaged line shape (e.g., Gaussian) and subdivides the spectral output channels into two sets to reduce contributions from uncorrelated fluctuations without averaging over the fast time dynamics. In principle, small fluctuations in the parameters used for a line shape model can be measured by evaluating the cross spectrum between different channel groupings to isolate a particular fluctuating quantity. High-frequency ion velocity measurements (100-200 kHz) were made by using this method. We also conducted simulations to compare LSCA with a moment analysis technique under a low photon count condition. Both experimental and synthetic measurements demonstrate the effectiveness of LSCA.

  16. Nonlinear Recurrent Dynamics and Long-Term Nonstationarities in EEG Alpha Cortical Activity: Implications for Choosing Adequate Segment Length in Nonlinear EEG Analyses.

    PubMed

    Cerquera, Alexander; Vollebregt, Madelon A; Arns, Martijn

    2018-03-01

    Nonlinear analysis of EEG recordings allows detection of characteristics that would probably be neglected by linear methods. This study aimed to determine a suitable epoch length for nonlinear analysis of EEG data based on its recurrence rate in EEG alpha activity (electrodes Fz, Oz, and Pz) from 28 healthy and 64 major depressive disorder subjects. Two nonlinear metrics, Lempel-Ziv complexity and scaling index, were applied in sliding windows of 20 seconds shifted every 1 second and in nonoverlapping windows of 1 minute. In addition, linear spectral analysis was carried out for comparison with the nonlinear results. The analysis with sliding windows showed that the cortical dynamics underlying alpha activity had a recurrence period of around 40 seconds in both groups. In the analysis with nonoverlapping windows, long-term nonstationarities entailed changes over time in the nonlinear dynamics that became significantly different between epochs across time, which was not detected with the linear spectral analysis. Findings suggest that epoch lengths shorter than 40 seconds neglect information in EEG nonlinear studies. In turn, linear analysis did not detect characteristics from long-term nonstationarities in EEG alpha waves of control subjects and patients with major depressive disorder patients. We recommend that application of nonlinear metrics in EEG time series, particularly of alpha activity, should be carried out with epochs around 60 seconds. In addition, this study aimed to demonstrate that long-term nonlinearities are inherent to the cortical brain dynamics regardless of the presence or absence of a mental disorder.

  17. Analysis of time dependent phenomena observed with the LPSP OSO-8 instrument. [solar chromosphere and photosphere

    NASA Technical Reports Server (NTRS)

    Leibacher, J. W.

    1979-01-01

    Data obtained by the Laboratoire de Physique Stellaire et Planetaire's ultraviolet spectrometer onboard the OSO-8 spacecraft were analyzed in an effort to dynamically model the solar chromosphere as an aid in enhancing knowledge of the dynamical processes themselves and of spectral line formation in the dynamic chromosphere. Repeated spectral scans of strong, optically thick resonance lines formed in the solar chromosphere were examined for indications of oscillatory velocities and intensities among other indications of velocity which were studied, the blue peak is reasonably well defined, and the position of a parabolic filter fitted by the least squares method was used to define it. Observed chromospheric oscillation periods are discussed as well as the variations in altitude of the emitting region which result primarily from the motion up and down during the oscillation.

  18. Signal analysis techniques for incipient failure detection in turbomachinery

    NASA Technical Reports Server (NTRS)

    Coffin, T.

    1985-01-01

    Signal analysis techniques for the detection and classification of incipient mechanical failures in turbomachinery were developed, implemented and evaluated. Signal analysis techniques available to describe dynamic measurement characteristics are reviewed. Time domain and spectral methods are described, and statistical classification in terms of moments is discussed. Several of these waveform analysis techniques were implemented on a computer and applied to dynamic signals. A laboratory evaluation of the methods with respect to signal detection capability is described. Plans for further technique evaluation and data base development to characterize turbopump incipient failure modes from Space Shuttle main engine (SSME) hot firing measurements are outlined.

  19. Comparative study of cluster Ag17Cu2 by instantaneous normal mode analysis and by isothermal Brownian-type molecular dynamics simulation.

    PubMed

    Tang, Ping-Han; Wu, Ten-Ming; Yen, Tsung-Wen; Lai, S K; Hsu, P J

    2011-09-07

    We perform isothermal Brownian-type molecular dynamics simulations to obtain the velocity autocorrelation function and its time Fourier-transformed power spectral density for the metallic cluster Ag(17)Cu(2). The temperature dependences of these dynamical quantities from T = 0 to 1500 K were examined and across this temperature range the cluster melting temperature T(m), which we define to be the principal maximum position of the specific heat is determined. The instantaneous normal mode analysis is then used to dissect the cluster dynamics by calculating the vibrational instantaneous normal mode density of states and hence its frequency integrated value I(j) which is an ensemble average of all vibrational projection operators for the jth atom in the cluster. In addition to comparing the results with simulation data, we look more closely at the entities I(j) of all atoms using the point group symmetry and diagnose their temperature variations. We find that I(j) exhibit features that may be used to deduce T(m), which turns out to agree very well with those inferred from the power spectral density and specific heat. © 2011 American Institute of Physics

  20. New approaches to the analysis of complex samples using fluorescence lifetime techniques and organized media

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hertz, P.R.

    Fluorescence spectroscopy is a highly sensitive and selective tool for the analysis of complex systems. In order to investigate the efficacy of several steady state and dynamic techniques for the analysis of complex systems, this work focuses on two types of complex, multicomponent samples: petrolatums and coal liquids. It is shown in these studies dynamic, fluorescence lifetime-based measurements provide enhanced discrimination between complex petrolatum samples. Additionally, improved quantitative analysis of multicomponent systems is demonstrated via incorporation of organized media in coal liquid samples. This research provides the first systematic studies of (1) multifrequency phase-resolved fluorescence spectroscopy for dynamic fluorescence spectralmore » fingerprinting of complex samples, and (2) the incorporation of bile salt micellar media to improve accuracy and sensitivity for characterization of complex systems. In the petroleum studies, phase-resolved fluorescence spectroscopy is used to combine spectral and lifetime information through the measurement of phase-resolved fluorescence intensity. The intensity is collected as a function of excitation and emission wavelengths, angular modulation frequency, and detector phase angle. This multidimensional information enhances the ability to distinguish between complex samples with similar spectral characteristics. Examination of the eigenvalues and eigenvectors from factor analysis of phase-resolved and steady state excitation-emission matrices, using chemometric methods of data analysis, confirms that phase-resolved fluorescence techniques offer improved discrimination between complex samples as compared with conventional steady state methods.« less

  1. Analysis of background irradiation in thermal IR hyper-spectral imaging systems

    NASA Astrophysics Data System (ADS)

    Xu, Weiming; Yuan, Liyin; Lin, Ying; He, Zhiping; Shu, Rong; Wang, Jianyu

    2010-04-01

    Our group designed a thermal IR hyper-spectral imaging system in this paper mounted in a vacuum encapsulated cavity with temperature controlling equipments. The spectral resolution is 80 nm; the spatial resolution is 1.0 mrad; the spectral channels are 32. By comparing and verifying the theoretical simulated calculation and experimental results for this system, we obtained the precise relationship between the temperature and background irradiation of optical and mechanical structures, and found the most significant components in the optic path for improving imaging quality that should be traded especially, also we had a conclusion that it should cool the imaging optics and structures to about 100K if we need utilize the full dynamic range and capture high quality of imagery.

  2. Temporal dynamics of spectral bioindicators evidence biological and ecological differences among functional types in a cork oak open woodland

    NASA Astrophysics Data System (ADS)

    Cerasoli, Sofia; Costa e Silva, Filipe; Silva, João M. N.

    2016-06-01

    The application of spectral vegetation indices for the purpose of vegetation monitoring and modeling increased largely in recent years. Nonetheless, the interpretation of biophysical properties of vegetation through their spectral signature is still a challenging task. This is particularly true in Mediterranean oak forest characterized by a high spatial and temporal heterogeneity. In this study, the temporal dynamics of vegetation indices expected to be related with green biomass and photosynthetic efficiency were compared for the canopy of trees, the herbaceous layer, and two shrub species: cistus ( Cistus salviifolius) and ulex ( Ulex airensis). coexisting in a cork oak woodland. All indices were calculated from in situ measurements with a FieldSpec3 spectroradiometer (ASD Inc., Boulder, USA). Large differences emerged in the temporal trends and in the correlation between climate and vegetation indices. The relationship between spectral indices and temperature, radiation, and vapor pressure deficit for cork oak was opposite to that observed for the herbaceous layer and cistus. No correlation was observed between rainfall and vegetation indices in cork oak and ulex, but in the herbaceous layer and in the cistus, significant correlations were found. The analysis of spectral vegetation indices with fraction of absorbed PAR (fPAR) and quantum yield of chlorophyll fluorescence ( ΔF/ Fm') evidenced strongest relationships with the indices Normalized Difference Water Index (NDWI) and Photochemical Reflectance Index (PRI)512, respectively. Our results, while confirms the ability of spectral vegetation indices to represent temporal dynamics of biophysical properties of vegetation, evidence the importance to consider ecosystem composition for a correct ecological interpretation of results when the spatial resolution of observations includes different plant functional types.

  3. Temporal dynamics of spectral bioindicators evidence biological and ecological differences among functional types in a cork oak open woodland.

    PubMed

    Cerasoli, Sofia; Costa E Silva, Filipe; Silva, João M N

    2016-06-01

    The application of spectral vegetation indices for the purpose of vegetation monitoring and modeling increased largely in recent years. Nonetheless, the interpretation of biophysical properties of vegetation through their spectral signature is still a challenging task. This is particularly true in Mediterranean oak forest characterized by a high spatial and temporal heterogeneity. In this study, the temporal dynamics of vegetation indices expected to be related with green biomass and photosynthetic efficiency were compared for the canopy of trees, the herbaceous layer, and two shrub species: cistus (Cistus salviifolius) and ulex (Ulex airensis). coexisting in a cork oak woodland. All indices were calculated from in situ measurements with a FieldSpec3 spectroradiometer (ASD Inc., Boulder, USA). Large differences emerged in the temporal trends and in the correlation between climate and vegetation indices. The relationship between spectral indices and temperature, radiation, and vapor pressure deficit for cork oak was opposite to that observed for the herbaceous layer and cistus. No correlation was observed between rainfall and vegetation indices in cork oak and ulex, but in the herbaceous layer and in the cistus, significant correlations were found. The analysis of spectral vegetation indices with fraction of absorbed PAR (fPAR) and quantum yield of chlorophyll fluorescence (ΔF/Fm') evidenced strongest relationships with the indices Normalized Difference Water Index (NDWI) and Photochemical Reflectance Index (PRI)512, respectively. Our results, while confirms the ability of spectral vegetation indices to represent temporal dynamics of biophysical properties of vegetation, evidence the importance to consider ecosystem composition for a correct ecological interpretation of results when the spatial resolution of observations includes different plant functional types.

  4. Protein Dynamics from NMR: The Slowly Relaxing Local Structure Analysis Compared with Model-Free Analysis

    PubMed Central

    Meirovitch, Eva; Shapiro, Yury E.; Polimeno, Antonino; Freed, Jack H.

    2009-01-01

    15N-1H spin relaxation is a powerful method for deriving information on protein dynamics. The traditional method of data analysis is model-free (MF), where the global and local N-H motions are independent and the local geometry is simplified. The common MF analysis consists of fitting single-field data. The results are typically field-dependent, and multi-field data cannot be fit with standard fitting schemes. Cases where known functional dynamics has not been detected by MF were identified by us and others. Recently we applied to spin relaxation in proteins the Slowly Relaxing Local Structure (SRLS) approach which accounts rigorously for mode-mixing and general features of local geometry. SRLS was shown to yield MF in appropriate asymptotic limits. We found that the experimental spectral density corresponds quite well to the SRLS spectral density. The MF formulae are often used outside of their validity ranges, allowing small data sets to be force-fitted with good statistics but inaccurate best-fit parameters. This paper focuses on the mechanism of force-fitting and its implications. It is shown that MF force-fits the experimental data because mode-mixing, the rhombic symmetry of the local ordering and general features of local geometry are not accounted for. Combined multi-field multi-temperature data analyzed by MF may lead to the detection of incorrect phenomena, while conformational entropy derived from MF order parameters may be highly inaccurate. On the other hand, fitting to more appropriate models can yield consistent physically insightful information. This requires that the complexity of the theoretical spectral densities matches the integrity of the experimental data. As shown herein, the SRLS densities comply with this requirement. PMID:16821820

  5. Local Environment and Interactions of Liquid and Solid Interfaces Revealed by Spectral Line Shape of Surface Selective Nonlinear Vibrational Probe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chen, Shun-Li; Fu, Li; Chase, Zizwe A.

    Vibrational spectral lineshape contains important detailed information of molecular vibration and reports its specific interactions and couplings to its local environment. In this work, recently developed sub-1 cm-1 high-resolution broadband sum frequency generation vibrational spectroscopy (HR-BB-SFG-VS) was used to measure the -C≡N stretch vibration in the 4-n-octyl-4’-cyanobiphenyl (8CB) Langmuir or Langmuir-Blodgett (LB) monolayer as a unique vibrational probe, and the spectral lineshape analysis revealed the local environment and interactions at the air/water, air/glass, air/calcium fluoride and air/-quartz interfaces for the first time. The 8CB Langmuir or LB film is uniform and the vibrational spectral lineshape of its -C≡N group hasmore » been well characterized, making it a good choice as the surface vibrational probe. Lineshape analysis of the 8CB -C≡N stretch SFG vibrational spectra suggests the coherent vibrational dynamics and the structural and dynamic inhomogeneity of the -C≡N group at each interface are uniquely different. In addition, it is also found that there are significantly different roles for water molecules in the LB films on different substrate surfaces. These results demonstrated the novel capabilities of the surface nonlinear spectroscopy in characterization and in understanding the specific structures and chemical interactions at the liquid and solid interfaces in general.« less

  6. Spectral Study of Measles Epidemics: The Dependence of Spectral Gradient on the Population Size of the Community

    NASA Astrophysics Data System (ADS)

    Sumi, Ayako; Olsen, Lars Folke; Ohtomo, Norio; Tanaka, Yukio; Sawamura, Sadashi

    2003-02-01

    We have carried out spectral analysis of measles notifications in several communities in Denmark, UK and USA. The results confirm that each power spectral density (PSD) shows exponential characteristics, which are universally observed in the PSD for time series generated from nonlinear dynamical system. The exponential gradient increases with the population size. For almost all communities, many spectral lines observed in each PSD can be fully assigned to linear combinations of several fundamental periods, suggesting that the measles data are substantially noise-free. The optimum least squares fitting curve calculated using these fundamental periods essentially reproduces an underlying variation of the measles data, and an extension of the curve can be used to predict measles epidemics. For the communities with large population sizes, some PSD patterns obtained from segment time series analysis show a close resemblance to the PSD patterns at the initial stages of a period-doubling bifurcation process for the so-called susceptible/exposed/infectious/recovered (SEIR) model with seasonal forcing. The meaning of the relationship between the exponential gradient and the population size is discussed.

  7. De-biasing the dynamic mode decomposition for applied Koopman spectral analysis of noisy datasets

    NASA Astrophysics Data System (ADS)

    Hemati, Maziar S.; Rowley, Clarence W.; Deem, Eric A.; Cattafesta, Louis N.

    2017-08-01

    The dynamic mode decomposition (DMD)—a popular method for performing data-driven Koopman spectral analysis—has gained increased popularity for extracting dynamically meaningful spatiotemporal descriptions of fluid flows from snapshot measurements. Often times, DMD descriptions can be used for predictive purposes as well, which enables informed decision-making based on DMD model forecasts. Despite its widespread use and utility, DMD can fail to yield accurate dynamical descriptions when the measured snapshot data are imprecise due to, e.g., sensor noise. Here, we express DMD as a two-stage algorithm in order to isolate a source of systematic error. We show that DMD's first stage, a subspace projection step, systematically introduces bias errors by processing snapshots asymmetrically. To remove this systematic error, we propose utilizing an augmented snapshot matrix in a subspace projection step, as in problems of total least-squares, in order to account for the error present in all snapshots. The resulting unbiased and noise-aware total DMD (TDMD) formulation reduces to standard DMD in the absence of snapshot errors, while the two-stage perspective generalizes the de-biasing framework to other related methods as well. TDMD's performance is demonstrated in numerical and experimental fluids examples. In particular, in the analysis of time-resolved particle image velocimetry data for a separated flow, TDMD outperforms standard DMD by providing dynamical interpretations that are consistent with alternative analysis techniques. Further, TDMD extracts modes that reveal detailed spatial structures missed by standard DMD.

  8. Shoreline Position Dynamics: Measurement and Analysis

    NASA Astrophysics Data System (ADS)

    Barton, C. C.; Rigling, B.; Hunter, N.; Tebbens, S. F.

    2012-12-01

    The dynamics of sandy shoreline position is a fundamental property of complex beach face processes and is characterized by the power scaling exponent. Spectral analysis was performed on the temporal position of four sandy shorelines extracted from four shore perpendicular profiles each resurveyed approximately seven times per year over twenty-seven years at the Field Research Facility (FRF) by the U.S. Army Corps of Engineers, located at Kitty Hawk, NC. The four shorelines we studied are mean-higher-high-water (MHHW), mean-high-water (MHW), and mean-low-water (MLW) and mean-lower-low-water (MLLW) with elevations of 0.75m, 0.65m, -0.33m, and -0.37m respectively, relative to the NGVD29 geodetic datum. Spectral analysis used to quantify scaling exponents requires data evenly spaced in time. Our previous studies of shoreline dynamics used the Lomb Periodogram method for spectral analysis, which we now show does not return the correct scaling exponent for unevenly spaced data. New to this study is the use of slotted resampling and a linear predictor to construct an evenly spaced data set from an unevenly spaced data set which has been shown with synthetic data to return correct values of the scaling exponents. A periodogram linear regression (PLR) estimate is used to determine the scaling exponent β of the constructed evenly spaced time series. This study shows that sandy shoreline position exhibits nonlinear self-affine dynamics through time. The times series of each of the four shorelines has scaling exponents ranging as follows: MHHW, β = 1.3-2.2; MHW, β = 1.3-2.1; MLW, β = 1.2-1.6; and MLLW, β = 1.2-1.6. Time series with β greater than 1 are non-stationary (mean and standard deviation are not constant through time) and are increasingly internally correlated with increasing β. The range of scaling exponents of the MLW and MLLW shorelines, near β = 1.5, is indicative of a diffusion process. The range of scaling exponents for the MHW and MHHW shorelines indicates spatially variable dynamics higher on the beach face.

  9. Analysis of biomass dynamics derived from spectral trajectories.

    Treesearch

    S.L. Powell; W.B. Cohen; R.E. Kennedy

    2007-01-01

    Quantification of the rates and variability of forest disturbance and regrowth at continental scales remains a critical challenge. We have undertaken an effort to address these issues, through funding from NASA, by coordinating research efforts between the USDA Forest Service Forest Inventory and Analysis (FIA) and the North American Carbon Program (NACP). We present...

  10. Spectral decomposition of nonlinear systems with memory

    NASA Astrophysics Data System (ADS)

    Svenkeson, Adam; Glaz, Bryan; Stanton, Samuel; West, Bruce J.

    2016-02-01

    We present an alternative approach to the analysis of nonlinear systems with long-term memory that is based on the Koopman operator and a Lévy transformation in time. Memory effects are considered to be the result of interactions between a system and its surrounding environment. The analysis leads to the decomposition of a nonlinear system with memory into modes whose temporal behavior is anomalous and lacks a characteristic scale. On average, the time evolution of a mode follows a Mittag-Leffler function, and the system can be described using the fractional calculus. The general theory is demonstrated on the fractional linear harmonic oscillator and the fractional nonlinear logistic equation. When analyzing data from an ill-defined (black-box) system, the spectral decomposition in terms of Mittag-Leffler functions that we propose may uncover inherent memory effects through identification of a small set of dynamically relevant structures that would otherwise be obscured by conventional spectral methods. Consequently, the theoretical concepts we present may be useful for developing more general methods for numerical modeling that are able to determine whether observables of a dynamical system are better represented by memoryless operators, or operators with long-term memory in time, when model details are unknown.

  11. Monitoring Urban Greenness Dynamics Using Multiple Endmember Spectral Mixture Analysis

    PubMed Central

    Gan, Muye; Deng, Jinsong; Zheng, Xinyu; Hong, Yang; Wang, Ke

    2014-01-01

    Urban greenness is increasingly recognized as an essential constituent of the urban environment and can provide a range of services and enhance residents’ quality of life. Understanding the pattern of urban greenness and exploring its spatiotemporal dynamics would contribute valuable information for urban planning. In this paper, we investigated the pattern of urban greenness in Hangzhou, China, over the past two decades using time series Landsat-5 TM data obtained in 1990, 2002, and 2010. Multiple endmember spectral mixture analysis was used to derive vegetation cover fractions at the subpixel level. An RGB-vegetation fraction model, change intensity analysis and the concentric technique were integrated to reveal the detailed, spatial characteristics and the overall pattern of change in the vegetation cover fraction. Our results demonstrated the ability of multiple endmember spectral mixture analysis to accurately model the vegetation cover fraction in pixels despite the complex spectral confusion of different land cover types. The integration of multiple techniques revealed various changing patterns in urban greenness in this region. The overall vegetation cover has exhibited a drastic decrease over the past two decades, while no significant change occurred in the scenic spots that were studied. Meanwhile, a remarkable recovery of greenness was observed in the existing urban area. The increasing coverage of small green patches has played a vital role in the recovery of urban greenness. These changing patterns were more obvious during the period from 2002 to 2010 than from 1990 to 2002, and they revealed the combined effects of rapid urbanization and greening policies. This work demonstrates the usefulness of time series of vegetation cover fractions for conducting accurate and in-depth studies of the long-term trajectories of urban greenness to obtain meaningful information for sustainable urban development. PMID:25375176

  12. Window Glasses: State and Prospects

    NASA Astrophysics Data System (ADS)

    Maiorov, V. A.

    2018-04-01

    Analysis and generalization of the results of investigations devoted to the improvement of optical properties have been carried out, and descriptions of a structure and a reaction mechanism of available and promising window glasses with solar radiation are presented. All devices are divided into groups with static constant and dynamic regulated spectral characteristics. The group of static glasses includes heat-protective and spectrally selective glasses with low-emissivity coatings and infrared filters with dispersed plasmonic nanoparticles. Electrochromic glasses, nanostructured dynamic infrared filters, and glasses with separated regulation of the transmission of visible-light and near-infrared radiation are dynamic devices. It is noted that the use of mesoporous films made of plasmonic nanoparticles open up especially wide possibilities. Their application allows one to realize a dynamic separated regulation of the transmission of visible light and nearinfrared radiation in which, under the gradual increase in the electric potential on the glass, mechanisms of plasmon and polaron reduction of solar radiation gradually change the glass' condition from light warm to light cold and then to dark cold consecutively.

  13. Spectral contents readout of birefringent sensor

    NASA Technical Reports Server (NTRS)

    Redner, Alex S.

    1989-01-01

    The technical objective of this research program was to develop a birefringent sensor, capable of measuring strain/stress up to 2000 F and a readout system based on Spectral Contents analysis. As a result of the research work, a data acquisition system was developed, capable of measuring strain birefringence in a sensor at 2000 F, with multi-point static and dynamic capabilities. The system uses a dedicated spectral analyzer for evaluation of stress-birefringence and a PC-based readout. Several sensor methods were evaluated. Fused silica was found most satisfactory. In the final evaluation, measurements were performed up to 2000 F and the system performance exceeded expectations.

  14. Estimating Achievable Accuracy for Global Imaging Spectroscopy Measurement of Non-Photosynthetic Vegetation Cover

    NASA Astrophysics Data System (ADS)

    Dennison, P. E.; Kokaly, R. F.; Daughtry, C. S. T.; Roberts, D. A.; Thompson, D. R.; Chambers, J. Q.; Nagler, P. L.; Okin, G. S.; Scarth, P.

    2016-12-01

    Terrestrial vegetation is dynamic, expressing seasonal, annual, and long-term changes in response to climate and disturbance. Phenology and disturbance (e.g. drought, insect attack, and wildfire) can result in a transition from photosynthesizing "green" vegetation to non-photosynthetic vegetation (NPV). NPV cover can include dead and senescent vegetation, plant litter, agricultural residues, and non-photosynthesizing stem tissue. NPV cover is poorly captured by conventional remote sensing vegetation indices, but it is readily separable from substrate cover based on spectral absorption features in the shortwave infrared. We will present past research motivating the need for global NPV measurements, establishing that mapping seasonal NPV cover is critical for improving our understanding of ecosystem function and carbon dynamics. We will also present new research that helps determine a best achievable accuracy for NPV cover estimation. To test the sensitivity of different NPV cover estimation methods, we simulated satellite imaging spectrometer data using field spectra collected over mixtures of NPV, green vegetation, and soil substrate. We incorporated atmospheric transmittance and modeled sensor noise to create simulated spectra with spectral resolutions ranging from 10 to 30 nm. We applied multiple methods of NPV estimation to the simulated spectra, including spectral indices, spectral feature analysis, multiple endmember spectral mixture analysis, and partial least squares regression, and compared the accuracy and bias of each method. These results prescribe sensor characteristics for an imaging spectrometer mission with NPV measurement capabilities, as well as a "Quantified Earth Science Objective" for global measurement of NPV cover. Copyright 2016, all rights reserved.

  15. A data base and analysis program for shuttle main engine dynamic pressure measurements. Appendix B: Data base plots for SSME tests 901-290 through 901-414

    NASA Technical Reports Server (NTRS)

    Coffin, T.

    1986-01-01

    A dynamic pressure data base and data base management system developed to characterize the Space Shuttle Main Engine (SSME) dynamic pressure environment is described. The data base represents dynamic pressure measurements obtained during single engine hot firing tesets of the SSME. Software is provided to permit statistical evaluation of selected measurements under specified operating conditions. An interpolation scheme is also included to estimate spectral trends with SSME power level. Flow dynamic environments in high performance rocket engines are discussed.

  16. A data base and analysis program for shuttle main engine dynamic pressure measurements. Appendix C: Data base plots for SSME tests 902-214 through 902-314

    NASA Technical Reports Server (NTRS)

    Coffin, T.

    1986-01-01

    A dynamic pressure data base and data base management system developed to characterize the Space Shuttle Main Engine (SSME) dynamic pressure environment is reported. The data base represents dynamic pressure measurements obtained during single engine hot firing tests of the SSME. Software is provided to permit statistical evaluation of selected measurements under specified operating conditions. An interpolation scheme is included to estimate spectral trends with SSME power level. Flow Dynamic Environments in High Performance Rocket Engines are described.

  17. Multispectral Live-Cell Imaging.

    PubMed

    Cohen, Sarah; Valm, Alex M; Lippincott-Schwartz, Jennifer

    2018-06-01

    Fluorescent proteins and vital dyes are invaluable tools for studying dynamic processes within living cells. However, the ability to distinguish more than a few different fluorescent reporters in a single sample is limited by the spectral overlap of available fluorophores. Here, we present a protocol for imaging live cells labeled with six fluorophores simultaneously. A confocal microscope with a spectral detector is used to acquire images, and linear unmixing algorithms are applied to identify the fluorophores present in each pixel of the image. We describe the application of this method to visualize the dynamics of six different organelles, and to quantify the contacts between organelles. However, this method can be used to image any molecule amenable to tagging with a fluorescent probe. Thus, multispectral live-cell imaging is a powerful tool for systems-level analysis of cellular organization and dynamics. © 2018 by John Wiley & Sons, Inc. Copyright © 2018 John Wiley & Sons, Inc.

  18. Spectral methods for CFD

    NASA Technical Reports Server (NTRS)

    Zang, Thomas A.; Streett, Craig L.; Hussaini, M. Yousuff

    1989-01-01

    One of the objectives of these notes is to provide a basic introduction to spectral methods with a particular emphasis on applications to computational fluid dynamics. Another objective is to summarize some of the most important developments in spectral methods in the last two years. The fundamentals of spectral methods for simple problems will be covered in depth, and the essential elements of several fluid dynamical applications will be sketched.

  19. Algorithms for Spectral Decomposition with Applications to Optical Plume Anomaly Detection

    NASA Technical Reports Server (NTRS)

    Srivastava, Askok N.; Matthews, Bryan; Das, Santanu

    2008-01-01

    The analysis of spectral signals for features that represent physical phenomenon is ubiquitous in the science and engineering communities. There are two main approaches that can be taken to extract relevant features from these high-dimensional data streams. The first set of approaches relies on extracting features using a physics-based paradigm where the underlying physical mechanism that generates the spectra is used to infer the most important features in the data stream. We focus on a complementary methodology that uses a data-driven technique that is informed by the underlying physics but also has the ability to adapt to unmodeled system attributes and dynamics. We discuss the following four algorithms: Spectral Decomposition Algorithm (SDA), Non-Negative Matrix Factorization (NMF), Independent Component Analysis (ICA) and Principal Components Analysis (PCA) and compare their performance on a spectral emulator which we use to generate artificial data with known statistical properties. This spectral emulator mimics the real-world phenomena arising from the plume of the space shuttle main engine and can be used to validate the results that arise from various spectral decomposition algorithms and is very useful for situations where real-world systems have very low probabilities of fault or failure. Our results indicate that methods like SDA and NMF provide a straightforward way of incorporating prior physical knowledge while NMF with a tuning mechanism can give superior performance on some tests. We demonstrate these algorithms to detect potential system-health issues on data from a spectral emulator with tunable health parameters.

  20. Numerical investigation of bubble nonlinear dynamics characteristics

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shi, Jie, E-mail: shijie@hrbeu.edu.cn; Yang, Desen; Shi, Shengguo

    2015-10-28

    The complicated dynamical behaviors of bubble oscillation driven by acoustic wave can provide favorable conditions for many engineering applications. On the basis of Keller-Miksis model, the influences of control parameters, including acoustic frequency, acoustic pressure and radius of gas bubble, are discussed by utilizing various numerical analysis methods, Furthermore, the law of power spectral variation is studied. It is shown that the complicated dynamic behaviors of bubble oscillation driven by acoustic wave, such as bifurcation and chaos, further the stimulated scattering processes are revealed.

  1. Rocketdyne automated dynamics data analysis and management system

    NASA Technical Reports Server (NTRS)

    Tarn, Robert B.

    1988-01-01

    An automated dynamics data analysis and management systems implemented on a DEC VAX minicomputer cluster is described. Multichannel acquisition, Fast Fourier Transformation analysis, and an online database have significantly improved the analysis of wideband transducer responses from Space Shuttle Main Engine testing. Leakage error correction to recover sinusoid amplitudes and correct for frequency slewing is described. The phase errors caused by FM recorder/playback head misalignment are automatically measured and used to correct the data. Data compression methods are described and compared. The system hardware is described. Applications using the data base are introduced, including software for power spectral density, instantaneous time history, amplitude histogram, fatigue analysis, and rotordynamics expert system analysis.

  2. Rapid acquisition of data dense solid-state CPMG NMR spectral sets using multi-dimensional statistical analysis

    DOE PAGES

    Mason, H. E.; Uribe, E. C.; Shusterman, J. A.

    2018-01-01

    Tensor-rank decomposition methods have been applied to variable contact time 29 Si{ 1 H} CP/CPMG NMR data sets to extract NMR dynamics information and dramatically decrease conventional NMR acquisition times.

  3. Rapid acquisition of data dense solid-state CPMG NMR spectral sets using multi-dimensional statistical analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mason, H. E.; Uribe, E. C.; Shusterman, J. A.

    Tensor-rank decomposition methods have been applied to variable contact time 29 Si{ 1 H} CP/CPMG NMR data sets to extract NMR dynamics information and dramatically decrease conventional NMR acquisition times.

  4. Spectral analysis of the turbulent mixing of two fluids

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Steinkamp, M.J.

    1996-02-01

    The authors describe a spectral approach to the investigation of fluid instability, generalized turbulence, and the interpenetration of fluids across an interface. The technique also applies to a single fluid with large variations in density. Departures of fluctuating velocity components from the local mean are far subsonic, but the mean Mach number can be large. Validity of the description is demonstrated by comparisons with experiments on turbulent mixing due to the late stages of Rayleigh-Taylor instability, when the dynamics become approximately self-similar in response to a constant body force. Generic forms for anisotropic spectral structure are described and used asmore » a basis for deriving spectrally integrated moment equations that can be incorporated into computer codes for scientific and engineering analyses.« less

  5. Spectral analysis techniques for characterizing cadmium zinc telluride polarization modulators

    NASA Astrophysics Data System (ADS)

    FitzGerald, William R.; Taherion, Saeid; Kumar, F. Joseph; Giles, David; Hore, Dennis K.

    2018-04-01

    The low frequency electro-optic characteristics of cadmium zinc telluride are demonstrated in the mid-infrared, in the spectral range 2.5-11 μm. Conventional methods for characterizing the dynamic response by monitoring the amplitude of the time-varying light intensity do not account for spatial variation in material properties. In such cases, a more revealing method involves monitoring two distinct frequency components in order to characterize the dynamic and static contributions to the optical retardation. We demonstrate that, while this method works well for a ZnSe photo-elastic modulator, it does not fully capture the response of a cadmium zinc telluride electro-optic modulator. Ultimately, we show that acquiring the full waveform of the optical response enables a model to be created that accounts for inhomogeneity in the material that results in an asymmetric response with respect to the polarity of the driving voltage. This technique is applicable to broadband and fixed-wavelength applications in a variety of spectral ranges.

  6. Discrimination of static and dynamic spectral patterns by children and young adults in relationship to speech perception in noise.

    PubMed

    Rayes, Hanin; Sheft, Stanley; Shafiro, Valeriy

    2014-01-01

    Past work has shown relationship between the ability to discriminate spectral patterns and measures of speech intelligibility. The purpose of this study was to investigate the ability of both children and young adults to discriminate static and dynamic spectral patterns, comparing performance between the two groups and evaluating within-group results in terms of relationship to speech-in-noise perception. Data were collected from normal-hearing children (age range: 5.4 - 12.8 yrs) and young adults (mean age: 22.8 yrs) on two spectral discrimination tasks and speech-in-noise perception. The first discrimination task, involving static spectral profiles, measured the ability to detect a change in the phase of a low-density sinusoidal spectral ripple of wideband noise. Using dynamic spectral patterns, the second task determined the signal-to-noise ratio needed to discriminate the temporal pattern of frequency fluctuation imposed by stochastic low-rate frequency modulation (FM). Children performed significantly poorer than young adults on both discrimination tasks. For children, a significant correlation between speech-in-noise perception and spectral-pattern discrimination was obtained only with the dynamic patterns of the FM condition, with partial correlation suggesting that factors related to the children's age mediated the relationship.

  7. Analysis of Electrowetting Dynamics with Level Set Method

    NASA Astrophysics Data System (ADS)

    Park, Jun Kwon; Hong, Jiwoo; Kang, Kwan Hyoung

    2009-11-01

    Electrowetting is a versatile tool to handle tiny droplets and forms a backbone of digital microfluidics. Numerical analysis is necessary to fully understand the dynamics of electrowetting, especially in designing electrowetting-based liquid lenses and reflective displays. We developed a numerical method to analyze the general contact-line problems, incorporating dynamic contact angle models. The method was applied to the analysis of spreading process of a sessile droplet for step input voltages in electrowetting. The result was compared with experimental data and analytical result which is based on the spectral method. It is shown that contact line friction significantly affects the contact line motion and the oscillation amplitude. The pinning process of contact line was well represented by including the hysteresis effect in the contact angle models.

  8. freeQuant: A Mass Spectrometry Label-Free Quantification Software Tool for Complex Proteome Analysis.

    PubMed

    Deng, Ning; Li, Zhenye; Pan, Chao; Duan, Huilong

    2015-01-01

    Study of complex proteome brings forward higher request for the quantification method using mass spectrometry technology. In this paper, we present a mass spectrometry label-free quantification tool for complex proteomes, called freeQuant, which integrated quantification with functional analysis effectively. freeQuant consists of two well-integrated modules: label-free quantification and functional analysis with biomedical knowledge. freeQuant supports label-free quantitative analysis which makes full use of tandem mass spectrometry (MS/MS) spectral count, protein sequence length, shared peptides, and ion intensity. It adopts spectral count for quantitative analysis and builds a new method for shared peptides to accurately evaluate abundance of isoforms. For proteins with low abundance, MS/MS total ion count coupled with spectral count is included to ensure accurate protein quantification. Furthermore, freeQuant supports the large-scale functional annotations for complex proteomes. Mitochondrial proteomes from the mouse heart, the mouse liver, and the human heart were used to evaluate the usability and performance of freeQuant. The evaluation showed that the quantitative algorithms implemented in freeQuant can improve accuracy of quantification with better dynamic range.

  9. Spectral characterization of V-type asteroids: are all the basaltic objects coming from Vesta?

    NASA Astrophysics Data System (ADS)

    Ieva, S.; Fulvio, D.; Dotto, E.; Lazzaro, D.; Perna, D.; Strazzulla, G.; Fulchignoni, M.

    In the last twenty-five years several small basaltic V-type asteroids have been identified all around the main belt. Most of them are members of the Vesta dynamical family, but an increasingly large number appear to have no link with it. The question that arises is whether all these basaltic objects do indeed come from Vesta. In the light of the Dawn mission, who visited Vesta in 2011-2012, recent works were dedicated to the observation of several new V-type asteroids and their comparison with laboratory data (Fulvio et al., \\cite{Fulvio2015}), and to a statistical analysis of the spectroscopic and mineralogical properties of the largest sample of V-types ever collected (Ieva et al., \\cite{Ieva2015}, with the objective to highlight similarities and differences among objects belonging and not belonging to the Vesta dynamical family. Laboratory experiments support the idea that V-type NEAs spectral properties could be due to a balance of space weathering and rejuvenation processes triggered by close encounters with terrestrial planets. Statistical analysis shows that although most of the V-type asteroids in the inner main belt do have a surface composition compatible with Vesta family members, this seem not to be the case for V-types in the middle and outer main belt. For these Middle and Outer V-types (MOVs), their sizes, spectral parameters and location far away from the Vesta dynamical region point to a different origin than Vesta.

  10. Spectral lags in different episodes of gamma-ray bursts

    NASA Astrophysics Data System (ADS)

    Jia, LanWei; Yi, TingFeng; Liang, EnWei

    2013-08-01

    A systematical analysis of the spectral lags in different episodes within a gamma-ray burst (GRB) for the BATSE GRB sample is given. The identified episodes are usually a single pulse with mixing of small fluctuations. The spectral lags were calculated for lightcurves in the 25-55 keV and 110-320 keV bands. No universal spectral lag evolution feature in different episodes within a GRB were found for most GRBs. Among 362 bright GRBs that have at least three well-identified episodes, 19 of them show long-to-short lag and 19 of them show short-to-long lag in successive episodes. The other 324 GRBs have no clear evolution trend. Defining the specified lag with the ratio of the spectral lag to the episode duration in 110-320 keV band, no prominent case of specified lag was found showing clear evolution features. The results suggest that the observed spectral lag may contribute to the dynamics and/or the radiation physics of a given emission episode.

  11. High-angular-resolution stellar imaging with occultations from the Cassini spacecraft - III. Mira

    NASA Astrophysics Data System (ADS)

    Stewart, Paul N.; Tuthill, Peter G.; Nicholson, Philip D.; Hedman, Matthew M.

    2016-04-01

    We present an analysis of spectral and spatial data of Mira obtained by the Cassini spacecraft, which not only observed the star's spectra over a broad range of near-infrared wavelengths, but was also able to obtain high-resolution spatial information by watching the star pass behind Saturn's rings. The observed spectral range of 1-5 microns reveals the stellar atmosphere in the crucial water-bands which are unavailable to terrestrial observers, and the simultaneous spatial sampling allows the origin of spectral features to be located in the stellar environment. Models are fitted to the data, revealing the spectral and spatial structure of molecular layers surrounding the star. High-resolution imagery is recovered revealing the layered and asymmetric nature of the stellar atmosphere. The observational data set is also used to confront the state-of-the-art cool opacity-sampling dynamic extended atmosphere models of Mira variables through a detailed spectral and spatial comparison, revealing in general a good agreement with some specific departures corresponding to particular spectral features.

  12. A decision tree algorithm for investigation of model biases related to dynamical cores and physical parameterizations: CESM/CAM EVALUATION BY DECISION TREES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Soner Yorgun, M.; Rood, Richard B.

    An object-based evaluation method using a pattern recognition algorithm (i.e., classification trees) is applied to the simulated orographic precipitation for idealized experimental setups using the National Center of Atmospheric Research (NCAR) Community Atmosphere Model (CAM) with the finite volume (FV) and the Eulerian spectral transform dynamical cores with varying resolutions. Daily simulations were analyzed and three different types of precipitation features were identified by the classification tree algorithm. The statistical characteristics of these features (i.e., maximum value, mean value, and variance) were calculated to quantify the difference between the dynamical cores and changing resolutions. Even with the simple and smoothmore » topography in the idealized setups, complexity in the precipitation fields simulated by the models develops quickly. The classification tree algorithm using objective thresholding successfully detected different types of precipitation features even as the complexity of the precipitation field increased. The results show that the complexity and the bias introduced in small-scale phenomena due to the spectral transform method of CAM Eulerian spectral dynamical core is prominent, and is an important reason for its dissimilarity from the FV dynamical core. The resolvable scales, both in horizontal and vertical dimensions, have significant effect on the simulation of precipitation. The results of this study also suggest that an efficient and informative study about the biases produced by GCMs should involve daily (or even hourly) output (rather than monthly mean) analysis over local scales.« less

  13. A decision tree algorithm for investigation of model biases related to dynamical cores and physical parameterizations: CESM/CAM EVALUATION BY DECISION TREES

    DOE PAGES

    Soner Yorgun, M.; Rood, Richard B.

    2016-11-11

    An object-based evaluation method using a pattern recognition algorithm (i.e., classification trees) is applied to the simulated orographic precipitation for idealized experimental setups using the National Center of Atmospheric Research (NCAR) Community Atmosphere Model (CAM) with the finite volume (FV) and the Eulerian spectral transform dynamical cores with varying resolutions. Daily simulations were analyzed and three different types of precipitation features were identified by the classification tree algorithm. The statistical characteristics of these features (i.e., maximum value, mean value, and variance) were calculated to quantify the difference between the dynamical cores and changing resolutions. Even with the simple and smoothmore » topography in the idealized setups, complexity in the precipitation fields simulated by the models develops quickly. The classification tree algorithm using objective thresholding successfully detected different types of precipitation features even as the complexity of the precipitation field increased. The results show that the complexity and the bias introduced in small-scale phenomena due to the spectral transform method of CAM Eulerian spectral dynamical core is prominent, and is an important reason for its dissimilarity from the FV dynamical core. The resolvable scales, both in horizontal and vertical dimensions, have significant effect on the simulation of precipitation. The results of this study also suggest that an efficient and informative study about the biases produced by GCMs should involve daily (or even hourly) output (rather than monthly mean) analysis over local scales.« less

  14. Real-time high-resolution heterodyne-based measurements of spectral dynamics in fibre lasers

    PubMed Central

    Sugavanam, Srikanth; Fabbri, Simon; Le, Son Thai; Lobach, Ivan; Kablukov, Sergey; Khorev, Serge; Churkin, Dmitry

    2016-01-01

    Conventional tools for measurement of laser spectra (e.g. optical spectrum analysers) capture data averaged over a considerable time period. However, the generation spectrum of many laser types may involve spectral dynamics whose relatively fast time scale is determined by their cavity round trip period, calling for instrumentation featuring both high temporal and spectral resolution. Such real-time spectral characterisation becomes particularly challenging if the laser pulses are long, or they have continuous or quasi-continuous wave radiation components. Here we combine optical heterodyning with a technique of spatio-temporal intensity measurements that allows the characterisation of such complex sources. Fast, round-trip-resolved spectral dynamics of cavity-based systems in real-time are obtained, with temporal resolution of one cavity round trip and frequency resolution defined by its inverse (85 ns and 24 MHz respectively are demonstrated). We also show how under certain conditions for quasi-continuous wave sources, the spectral resolution could be further increased by a factor of 100 by direct extraction of phase information from the heterodyned dynamics or by using double time scales within the spectrogram approach. PMID:26984634

  15. Dynamics of fractional condensation of a substance on a probe for spectral analysis

    NASA Astrophysics Data System (ADS)

    Zakharov, Yu. A.; Kokorina, O. B.; Lysogorskiĭ, Yu. V.; Sevastianov, A. A.

    2008-11-01

    The fractional separation of trace metals on a cold tungsten probe from salt matrix vapor, which interferes with the spectral analysis, is studied. The spatial structure of the vapor flows of sodium chloride, potassium sulfate, and indium atoms is visualized at characteristic wavelengths as they interact with the probe. The vapor flow rate and the probe orientation were varied. It is found that the smoke of the matrix does not prevent the deposition of the metal on the probe because of spatial separation of these fractions and that the detrimental effect of thermal gas expansion and other factors is eliminated. The sensitivity of the atomic absorption analysis of indium impurities in these salts is increased by an order of magnitude.

  16. A Modified Relative Spectral Mixture Analysis to Extract the Fractions of Major Land Cover Components

    NASA Astrophysics Data System (ADS)

    Jia, S.

    2015-12-01

    As an effective method of extracting land cover fractions based on spectral endmembers, spectral mixture analysis (SMA) has been applied using remotely sensed imagery in different spatial, temporal, and spectral resolutions. A number of studies focused on arid/semiarid ecosystem have used SMA to obtain the land cover fractions of GV, NPV/litter, and bare soil (BS) using MODIS reflectance products to understand ecosystem phenology, track vegetation dynamics, and evaluate the impact of major disturbances. However, several challenges remain in the application of SMA in studying ecosystem phenology, including obtaining high quality endmembers and increasing computational efficiency when considering to long time series that cover a broad spatial extent. Okin (2007) proposes a variation of SMA, named as relative spectra mixture analysis (RSMA) to address the latter challenge by calculating the relative change of fraction of GV, NPV/litter, and BS compared with a baseline date. This approach assumes that the baseline image contains the spectral information of the bare soil that can be used as an endmember for spectral mixture analysis though it is mixed with the spectral reflectance of other non-soil land cover types. Using the baseline image, one can obtain the change of fractions of GV, NPV/litter, BS, and snow compared with the baseline image. However, RSMA results depend on the selection of baseline date and the fractional components during this date. In this study, we modified the strategy of implementing RSMA by introducing a step of obtaining a soil map as the baseline image using multiple-endmember SMA (MESMA) before applying RSMA. The fractions of land cover components from this modified RSMA are also validated using the field observations from two study area in semiarid savanna and grassland of Queensland, Australia.

  17. Parametric Methods for Dynamic 11C-Phenytoin PET Studies.

    PubMed

    Mansor, Syahir; Yaqub, Maqsood; Boellaard, Ronald; Froklage, Femke E; de Vries, Anke; Bakker, Esther D M; Voskuyl, Rob A; Eriksson, Jonas; Schwarte, Lothar A; Verbeek, Joost; Windhorst, Albert D; Lammertsma, Adriaan A

    2017-03-01

    In this study, the performance of various methods for generating quantitative parametric images of dynamic 11 C-phenytoin PET studies was evaluated. Methods: Double-baseline 60-min dynamic 11 C-phenytoin PET studies, including online arterial sampling, were acquired for 6 healthy subjects. Parametric images were generated using Logan plot analysis, a basis function method, and spectral analysis. Parametric distribution volume (V T ) and influx rate ( K 1 ) were compared with those obtained from nonlinear regression analysis of time-activity curves. In addition, global and regional test-retest (TRT) variability was determined for parametric K 1 and V T values. Results: Biases in V T observed with all parametric methods were less than 5%. For K 1 , spectral analysis showed a negative bias of 16%. The mean TRT variabilities of V T and K 1 were less than 10% for all methods. Shortening the scan duration to 45 min provided similar V T and K 1 with comparable TRT performance compared with 60-min data. Conclusion: Among the various parametric methods tested, the basis function method provided parametric V T and K 1 values with the least bias compared with nonlinear regression data and showed TRT variabilities lower than 5%, also for smaller volume-of-interest sizes (i.e., higher noise levels) and shorter scan duration. © 2017 by the Society of Nuclear Medicine and Molecular Imaging.

  18. Dynamic metabolic imaging of hyperpolarized [2-(13) C]pyruvate using spiral chemical shift imaging with alternating spectral band excitation.

    PubMed

    Josan, Sonal; Hurd, Ralph; Park, Jae Mo; Yen, Yi-Fen; Watkins, Ron; Pfefferbaum, Adolf; Spielman, Daniel; Mayer, Dirk

    2014-06-01

    In contrast to [1-(13) C]pyruvate, hyperpolarized [2-(13) C]pyruvate permits the ability to follow the (13) C label beyond flux through pyruvate dehydrogenase complex and investigate the incorporation of acetyl-coenzyme A into different metabolic pathways. However, chemical shift imaging (CSI) with [2-(13) C]pyruvate is challenging owing to the large spectral dispersion of the resonances, which also leads to severe chemical shift displacement artifacts for slice-selective acquisitions. This study introduces a sequence for three-dimensional CSI of [2-(13) C]pyruvate using spectrally selective excitation of limited frequency bands containing a subset of metabolites. Dynamic CSI data were acquired alternately from multiple frequency bands in phantoms for sequence testing and in vivo in rat heart. Phantom experiments verified the radiofrequency pulse design and demonstrated that the signal behavior of each group of resonances was unaffected by excitation of the other frequency bands. Dynamic three-dimensional (13) C CSI data demonstrated the sequence capability to image pyruvate, lactate, acetylcarnitine, glutamate, and acetoacetate, enabling the analysis of organ-specific spectra and metabolite time courses. The presented method allows CSI of widely separated resonances without chemical shift displacement artifact, acquiring multiple frequency bands alternately to obtain dynamic time-course information. This approach enables robust imaging of downstream metabolic products of acetyl-coenzyme A with hyperpolarized [2-(13) C]pyruvate. Copyright © 2013 Wiley Periodicals, Inc.

  19. Random Matrix Theory in molecular dynamics analysis.

    PubMed

    Palese, Luigi Leonardo

    2015-01-01

    It is well known that, in some situations, principal component analysis (PCA) carried out on molecular dynamics data results in the appearance of cosine-shaped low index projections. Because this is reminiscent of the results obtained by performing PCA on a multidimensional Brownian dynamics, it has been suggested that short-time protein dynamics is essentially nothing more than a noisy signal. Here we use Random Matrix Theory to analyze a series of short-time molecular dynamics experiments which are specifically designed to be simulations with high cosine content. We use as a model system the protein apoCox17, a mitochondrial copper chaperone. Spectral analysis on correlation matrices allows to easily differentiate random correlations, simply deriving from the finite length of the process, from non-random signals reflecting the intrinsic system properties. Our results clearly show that protein dynamics is not really Brownian also in presence of the cosine-shaped low index projections on principal axes. Copyright © 2014 Elsevier B.V. All rights reserved.

  20. LANDSAT-D investigations in snow hydrology

    NASA Technical Reports Server (NTRS)

    Dozier, J. (Principal Investigator); Davis, R. E.; Dubayah, R. O.; Frew, J. E.; Li, S.; Marks, D.; Milliff, R. F.; Rousseau, D. D.; Wan, Z. M.

    1985-01-01

    Work undertaken during the contract and its results are described. Many of the results from this investigation are available in journal or conference proceedings literature - published, accepted for publication, or submitted for publication. For these the reference and the abstract are given. Those results that have not yet been submitted separately for publication are described in detail. Accomplishments during the contract period are summarized as follows: (1) analysis of the snow reflectance characteristics of the LANDSAT Thematic Mapper, including spectral suitability, dynamic range, and spectral resolution; (2) development of a variety of atmospheric models for use with LANDSAT Thematic Mapper data. These include a simple but fast two-stream approximation for inhomogeneous atmospheres over irregular surfaces, and a doubling model for calculation of the angular distribution of spectral radiance at any level in an plane-parallel atmosphere; (3) incorporation of digital elevation data into the atmospheric models and into the analysis of the satellite data; and (4) textural analysis of the spatial distribution of snow cover.

  1. Spectral analysis method and sample generation for real time visualization of speech

    NASA Astrophysics Data System (ADS)

    Hobohm, Klaus

    A method for translating speech signals into optical models, characterized by high sound discrimination and learnability and designed to provide to deaf persons a feedback towards control of their way of speaking, is presented. Important properties of speech production and perception processes and organs involved in these mechanisms are recalled in order to define requirements for speech visualization. It is established that the spectral representation of time, frequency and amplitude resolution of hearing must be fair and continuous variations of acoustic parameters of speech signal must be depicted by a continuous variation of images. A color table was developed for dynamic illustration and sonograms were generated with five spectral analysis methods such as Fourier transformations and linear prediction coding. For evaluating sonogram quality, test persons had to recognize consonant/vocal/consonant words and an optimized analysis method was achieved with a fast Fourier transformation and a postprocessor. A hardware concept of a real time speech visualization system, based on multiprocessor technology in a personal computer, is presented.

  2. Spatial and Temporal Evolution of Earthquake Dynamics: Case Study of the Mw 8.3 Illapel Earthquake, Chile

    NASA Astrophysics Data System (ADS)

    Yin, Jiuxun; Denolle, Marine A.; Yao, Huajian

    2018-01-01

    We develop a methodology that combines compressive sensing backprojection (CS-BP) and source spectral analysis of teleseismic P waves to provide metrics relevant to earthquake dynamics of large events. We improve the CS-BP method by an autoadaptive source grid refinement as well as a reference source adjustment technique to gain better spatial and temporal resolution of the locations of the radiated bursts. We also use a two-step source spectral analysis based on (i) simple theoretical Green's functions that include depth phases and water reverberations and on (ii) empirical P wave Green's functions. Furthermore, we propose a source spectrogram methodology that provides the temporal evolution of dynamic parameters such as radiated energy and falloff rates. Bridging backprojection and spectrogram analysis provides a spatial and temporal evolution of these dynamic source parameters. We apply our technique to the recent 2015 Mw 8.3 megathrust Illapel earthquake (Chile). The results from both techniques are consistent and reveal a depth-varying seismic radiation that is also found in other megathrust earthquakes. The low-frequency content of the seismic radiation is located in the shallow part of the megathrust, propagating unilaterally from the hypocenter toward the trench while most of the high-frequency content comes from the downdip part of the fault. Interpretation of multiple rupture stages in the radiation is also supported by the temporal variations of radiated energy and falloff rates. Finally, we discuss the possible mechanisms, either from prestress, fault geometry, and/or frictional properties to explain our observables. Our methodology is an attempt to bridge kinematic observations with earthquake dynamics.

  3. Neuroelectrical Decomposition of Spontaneous Brain Activity Measured with Functional Magnetic Resonance Imaging

    PubMed Central

    Liu, Zhongming; de Zwart, Jacco A.; Chang, Catie; Duan, Qi; van Gelderen, Peter; Duyn, Jeff H.

    2014-01-01

    Spontaneous activity in the human brain occurs in complex spatiotemporal patterns that may reflect functionally specialized neural networks. Here, we propose a subspace analysis method to elucidate large-scale networks by the joint analysis of electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) data. The new approach is based on the notion that the neuroelectrical activity underlying the fMRI signal may have EEG spectral features that report on regional neuronal dynamics and interregional interactions. Applying this approach to resting healthy adults, we indeed found characteristic spectral signatures in the EEG correlates of spontaneous fMRI signals at individual brain regions as well as the temporal synchronization among widely distributed regions. These spectral signatures not only allowed us to parcel the brain into clusters that resembled the brain's established functional subdivision, but also offered important clues for disentangling the involvement of individual regions in fMRI network activity. PMID:23796947

  4. Modeling Electronic-Nuclear Interactions for Excitation Energy Transfer Processes in Light-Harvesting Complexes.

    PubMed

    Lee, Mi Kyung; Coker, David F

    2016-08-18

    An accurate approach for computing intermolecular and intrachromophore contributions to spectral densities to describe the electronic-nuclear interactions relevant for modeling excitation energy transfer processes in light harvesting systems is presented. The approach is based on molecular dynamics (MD) calculations of classical correlation functions of long-range contributions to excitation energy fluctuations and a separate harmonic analysis and single-point gradient quantum calculations for electron-intrachromophore vibrational couplings. A simple model is also presented that enables detailed analysis of the shortcomings of standard MD-based excitation energy fluctuation correlation function approaches. The method introduced here avoids these problems, and its reliability is demonstrated in accurate predictions for bacteriochlorophyll molecules in the Fenna-Matthews-Olson pigment-protein complex, where excellent agreement with experimental spectral densities is found. This efficient approach can provide instantaneous spectral densities for treating the influence of fluctuations in environmental dissipation on fast electronic relaxation.

  5. Coloured Dissolved Organic Matter (CDOM) dynamics in small surface reservoirs in semiarid Brazil

    NASA Astrophysics Data System (ADS)

    Coelho, Christine; Foerster, Saskia; Heim, Birgit; de Araujo, Jose Carlos

    2016-04-01

    Coloured Dissolved Organic Matter (CDOM) is one of the major light absorbing constituents in freshwaters. Supplied from degradation of components of the aquatic environment, it consists mainly of humic substances and its concentration is strongly related to primary production, often associated to macrophytes. It plays a central role in several biological and chemical processes affecting the bioavailability of nutrients in aquatic ecosystems. Therefore CDOM can be regarded as a water quality indicator. We used the spectral absorption and spectral slope for understanding CDOM dynamics in surface reservoirs in the Brazilian semiarid region. The analysis was based on water samples collected in three reservoirs in a total of ten sampling locations in the period June 2014 to November 2015 with monthly to bi-monthly intervals totaling 120 samples. The collected water samples were filtered through cellulose acetate membrane filters. Subsequently, spectral absorbance was measured in a Lambda 950 UV-VIS spectrometer in the spectral range 250 to 800 nm using a quartz cuvette with 5 cm optical path. From the absorbance measurement, we obtained CDOM content using the specific absorption coefficient at 440nm as well as spectral slope. The average slope for the entire period for all reservoirs is 0,018, but we found a considerable increase in spectral slope values after the wet period (between February 2014 and June 2014) for the reservoirs São Nicolau and Paus Branco while Marengo reservoir showed only slight variations during this period, but exhibited an increase only in the dry period. Regarding aCDOM(440), the average was equal to 2,55 for Marengo, 5,70 for São Nicolau, and 3,53 for Paus Branco reservoir indicating different characteristics of these reservoirs. We noticed a decrease in the absorption coefficient for São Nicolau and Paus Branco reservoirs at the end of the wet period whereas for Marengo reservoir this value showed a different behavior. Spectral slope and spectral absorption seem consistent and, among other possible factors, its dynamics were affected by high evaporation and low precipitation, typical conditions for semiarid regions in the tropics. The results show also evidence of the hysteresis phenomenon related to humic substance properties. However, it is important to consider also other water quality parameters in order to assess the whole interaction occurring in the reservoirs under eutrophic conditions. This is a first study of the application of spectral absorption and spectral slope of CDOM for small reservoirs in semiarid Brazil providing additional information to the traditional water quality measurements. In the future, we plan to relate the in-situ measurements to satellite imagery to study spatio-temporal water quality dynamics and relate them to land use changes.

  6. Improved moving window cross-spectral analysis for resolving large temporal seismic velocity changes in permafrost

    DOE PAGES

    James, S. R.; Knox, H. A.; Abbott, R. E.; ...

    2017-04-13

    Cross correlations of seismic noise can potentially record large changes in subsurface velocity due to permafrost dynamics and be valuable for long-term Arctic monitoring. We applied seismic interferometry, using moving window cross-spectral analysis (MWCS), to 2 years of ambient noise data recorded in central Alaska to investigate whether seismic noise could be used to quantify relative velocity changes due to seasonal active-layer dynamics. The large velocity changes (>75%) between frozen and thawed soil caused prevalent cycle-skipping which made the method unusable in this setting. We developed an improved MWCS procedure which uses a moving reference to measure daily velocity variationsmore » that are then accumulated to recover the full seasonal change. This approach reduced cycle-skipping and recovered a seasonal trend that corresponded well with the timing of active-layer freeze and thaw. Lastly, this improvement opens the possibility of measuring large velocity changes by using MWCS and permafrost monitoring by using ambient noise.« less

  7. Dynamic terahertz spectroscopy of gas molecules mixed with unwanted aerosol under atmospheric pressure using fibre-based asynchronous-optical-sampling terahertz time-domain spectroscopy

    PubMed Central

    Hsieh, Yi-Da; Nakamura, Shota; Abdelsalam, Dahi Ghareab; Minamikawa, Takeo; Mizutani, Yasuhiro; Yamamoto, Hirotsugu; Iwata, Tetsuo; Hindle, Francis; Yasui, Takeshi

    2016-01-01

    Terahertz (THz) spectroscopy is a promising method for analysing polar gas molecules mixed with unwanted aerosols due to its ability to obtain spectral fingerprints of rotational transition and immunity to aerosol scattering. In this article, dynamic THz spectroscopy of acetonitrile (CH3CN) gas was performed in the presence of smoke under the atmospheric pressure using a fibre-based, asynchronous-optical-sampling THz time-domain spectrometer. To match THz spectral signatures of gas molecules at atmospheric pressure, the spectral resolution was optimized to 1 GHz with a measurement rate of 1 Hz. The spectral overlapping of closely packed absorption lines significantly boosted the detection limit to 200 ppm when considering all the spectral contributions of the numerous absorption lines from 0.2 THz to 1 THz. Temporal changes of the CH3CN gas concentration were monitored under the smoky condition at the atmospheric pressure during volatilization of CH3CN droplets and the following diffusion of the volatilized CH3CN gas without the influence of scattering or absorption by the smoke. This system will be a powerful tool for real-time monitoring of target gases in practical applications of gas analysis in the atmospheric pressure, such as combustion processes or fire accident. PMID:27301319

  8. Dynamic terahertz spectroscopy of gas molecules mixed with unwanted aerosol under atmospheric pressure using fibre-based asynchronous-optical-sampling terahertz time-domain spectroscopy

    NASA Astrophysics Data System (ADS)

    Hsieh, Yi-Da; Nakamura, Shota; Abdelsalam, Dahi Ghareab; Minamikawa, Takeo; Mizutani, Yasuhiro; Yamamoto, Hirotsugu; Iwata, Tetsuo; Hindle, Francis; Yasui, Takeshi

    2016-06-01

    Terahertz (THz) spectroscopy is a promising method for analysing polar gas molecules mixed with unwanted aerosols due to its ability to obtain spectral fingerprints of rotational transition and immunity to aerosol scattering. In this article, dynamic THz spectroscopy of acetonitrile (CH3CN) gas was performed in the presence of smoke under the atmospheric pressure using a fibre-based, asynchronous-optical-sampling THz time-domain spectrometer. To match THz spectral signatures of gas molecules at atmospheric pressure, the spectral resolution was optimized to 1 GHz with a measurement rate of 1 Hz. The spectral overlapping of closely packed absorption lines significantly boosted the detection limit to 200 ppm when considering all the spectral contributions of the numerous absorption lines from 0.2 THz to 1 THz. Temporal changes of the CH3CN gas concentration were monitored under the smoky condition at the atmospheric pressure during volatilization of CH3CN droplets and the following diffusion of the volatilized CH3CN gas without the influence of scattering or absorption by the smoke. This system will be a powerful tool for real-time monitoring of target gases in practical applications of gas analysis in the atmospheric pressure, such as combustion processes or fire accident.

  9. HINODE/EIS SPECTROSCOPIC VALIDATION OF VERY HOT PLASMA IMAGED WITH THE SOLAR DYNAMICS OBSERVATORY IN NON-FLARING ACTIVE REGION CORES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Testa, Paola; Reale, Fabio, E-mail: ptesta@cfa.harvard.edu

    2012-05-01

    We use coronal imaging observations with the Solar Dynamics Observatory/Atmospheric Imaging Assembly (AIA), and Hinode/Extreme-ultraviolet Imaging Spectrometer (EIS) spectral data to explore the potential of narrowband EUV imaging data for diagnosing the presence of hot (T {approx}> 5 MK) coronal plasma in active regions. We analyze observations of two active regions (AR 11281, AR 11289) with simultaneous AIA imaging and EIS spectral data, including the Ca XVII line (at 192.8 A), which is one of the few lines in the EIS spectral bands sensitive to hot coronal plasma even outside flares. After careful co-alignment of the imaging and spectral data,more » we compare the morphology in a three-color image combining the 171, 335, and 94 A AIA spectral bands, with the image obtained for Ca XVII emission from the analysis of EIS spectra. We find that in the selected active regions the Ca XVII emission is strong only in very limited areas, showing striking similarities with the features bright in the 94 A (and 335 A) AIA channels and weak in the 171 A band. We conclude that AIA imaging observations of the solar corona can be used to track hot plasma (6-8 MK), and so to study its spatial variability and temporal evolution at high spatial and temporal resolution.« less

  10. Dynamic terahertz spectroscopy of gas molecules mixed with unwanted aerosol under atmospheric pressure using fibre-based asynchronous-optical-sampling terahertz time-domain spectroscopy.

    PubMed

    Hsieh, Yi-Da; Nakamura, Shota; Abdelsalam, Dahi Ghareab; Minamikawa, Takeo; Mizutani, Yasuhiro; Yamamoto, Hirotsugu; Iwata, Tetsuo; Hindle, Francis; Yasui, Takeshi

    2016-06-15

    Terahertz (THz) spectroscopy is a promising method for analysing polar gas molecules mixed with unwanted aerosols due to its ability to obtain spectral fingerprints of rotational transition and immunity to aerosol scattering. In this article, dynamic THz spectroscopy of acetonitrile (CH3CN) gas was performed in the presence of smoke under the atmospheric pressure using a fibre-based, asynchronous-optical-sampling THz time-domain spectrometer. To match THz spectral signatures of gas molecules at atmospheric pressure, the spectral resolution was optimized to 1 GHz with a measurement rate of 1 Hz. The spectral overlapping of closely packed absorption lines significantly boosted the detection limit to 200 ppm when considering all the spectral contributions of the numerous absorption lines from 0.2 THz to 1 THz. Temporal changes of the CH3CN gas concentration were monitored under the smoky condition at the atmospheric pressure during volatilization of CH3CN droplets and the following diffusion of the volatilized CH3CN gas without the influence of scattering or absorption by the smoke. This system will be a powerful tool for real-time monitoring of target gases in practical applications of gas analysis in the atmospheric pressure, such as combustion processes or fire accident.

  11. Separation of β-amyloid binding and white matter uptake of 18F-flutemetamol using spectral analysis

    PubMed Central

    Heurling, Kerstin; Buckley, Christopher; Vandenberghe, Rik; Laere, Koen Van; Lubberink, Mark

    2015-01-01

    The kinetic components of the β-amyloid ligand 18F-flutemetamol binding in grey and white matter were investigated through spectral analysis, and a method developed for creation of parametric images separating grey and white matter uptake. Tracer uptake in grey and white matter and cerebellar cortex was analyzed through spectral analysis in six subjects, with (n=4) or without (n=2) apparent β-amyloid deposition, having undergone dynamic 18F-flutemetamol scanning with arterial blood sampling. The spectra were divided into three components: slow, intermediate and fast basis function rates. The contribution of each of the components to total volume of distribution (VT) was assessed for different tissue types. The slow component dominated in white matter (average 90%), had a higher contribution to grey matter VT in subjects with β-amyloid deposition (average 44%) than without (average 6%) and was absent in cerebellar cortex, attributing the slow component of 18F-flutemetamol uptake in grey matter to β-amyloid binding. Parametric images of voxel-based spectral analysis were created for VT, the slow component and images segmented based on the slow component contribution; confirming that grey matter and white matter uptake can be discriminated on voxel-level using a threshold for the contribution from the slow component to VT. PMID:26550542

  12. Identification of neuronal network properties from the spectral analysis of calcium imaging signals in neuronal cultures.

    PubMed

    Tibau, Elisenda; Valencia, Miguel; Soriano, Jordi

    2013-01-01

    Neuronal networks in vitro are prominent systems to study the development of connections in living neuronal networks and the interplay between connectivity, activity and function. These cultured networks show a rich spontaneous activity that evolves concurrently with the connectivity of the underlying network. In this work we monitor the development of neuronal cultures, and record their activity using calcium fluorescence imaging. We use spectral analysis to characterize global dynamical and structural traits of the neuronal cultures. We first observe that the power spectrum can be used as a signature of the state of the network, for instance when inhibition is active or silent, as well as a measure of the network's connectivity strength. Second, the power spectrum identifies prominent developmental changes in the network such as GABAA switch. And third, the analysis of the spatial distribution of the spectral density, in experiments with a controlled disintegration of the network through CNQX, an AMPA-glutamate receptor antagonist in excitatory neurons, reveals the existence of communities of strongly connected, highly active neurons that display synchronous oscillations. Our work illustrates the interest of spectral analysis for the study of in vitro networks, and its potential use as a network-state indicator, for instance to compare healthy and diseased neuronal networks.

  13. Stochastic ground motion simulation

    USGS Publications Warehouse

    Rezaeian, Sanaz; Xiaodan, Sun; Beer, Michael; Kougioumtzoglou, Ioannis A.; Patelli, Edoardo; Siu-Kui Au, Ivan

    2014-01-01

    Strong earthquake ground motion records are fundamental in engineering applications. Ground motion time series are used in response-history dynamic analysis of structural or geotechnical systems. In such analysis, the validity of predicted responses depends on the validity of the input excitations. Ground motion records are also used to develop ground motion prediction equations(GMPEs) for intensity measures such as spectral accelerations that are used in response-spectrum dynamic analysis. Despite the thousands of available strong ground motion records, there remains a shortage of records for large-magnitude earthquakes at short distances or in specific regions, as well as records that sample specific combinations of source, path, and site characteristics.

  14. Electric field determination in the plasma-antenna boundary of a lower-hybrid wave launcher in Tore Supra through dynamic Stark-effect spectroscopy

    NASA Astrophysics Data System (ADS)

    Martin, E. H.; Goniche, M.; Klepper, C. C.; Hillairet, J.; Isler, R. C.; Bottereau, C.; Colas, L.; Ekedahl, A.; Panayotis, S.; Pegourie, B.; Lotte, Ph; Colledani, G.; Caughman, J. B.; Harris, J. H.; Hillis, D. L.; Shannon, S. C.; Clairet, F.; Litaudon, X.

    2015-06-01

    Interaction of radio-frequency (RF) waves with the plasma in the near-field of a high-power wave launcher is now seen to be an important topic, both in understanding the channeling of these waves through the plasma boundary and in avoiding power losses in the edge. In a recent Letter, a direct non-intrusive measurement of a near antenna RF electric field in the range of lower hybrid (LH) frequencies (ELH) was announced (2013 Phys. Rev. Lett. 110 215005). This measurement was achieved through the fitting of Balmer series deuterium spectral lines utilizing a time dependent (dynamic) Stark effect model. In this article, the analysis of the spectral data is discussed in detail and applied to a larger range of measurements and the accuracy and limitations of the experimental technique are investigated. It was found through an analysis of numerous Tore Supra discharges that good quantitative agreement exists between the measured and full-wave modeled ELH when the launched power exceeds 0.5 MW. For low power the measurement becomes inaccurate utilizing the implemented passive spectroscopic technique because the spectral noise overwhelms the effect of the RF electric field on the line profile. Additionally, effects of the ponderomotive force are suspected at sufficiently high power.

  15. Multi-frequency data analysis in AFM by wavelet transform

    NASA Astrophysics Data System (ADS)

    Pukhova, V.; Ferrini, G.

    2017-10-01

    Interacting cantilevers in AFM experiments generate non-stationary, multi-frequency signals consisting of numerous excited flexural and torsional modes and their harmonics. The analysis of such signals is challenging, requiring special methodological approaches and a powerful mathematical apparatus. The most common approach to the signal analysis is to apply Fourier transform analysis. However, FT gives accurate spectra for stationary signals, and for signals changing their spectral content over time, FT provides only an averaged spectrum. Hence, for non-stationary and rapidly varying signals, such as those from interacting cantilevers, a method that shows the spectral evolution in time is needed. One of the most powerful techniques, allowing detailed time-frequency representation of signals, is the wavelet transform. It is a method of analysis that allows representation of energy associated to the signal at a particular frequency and time, providing correlation between the spectral and temporal features of the signal, unlike FT. This is particularly important in AFM experiments because signals nonlinearities contains valuable information about tip-sample interactions and consequently surfaces properties. The present work is aimed to show the advantages of wavelet transform in comparison with FT using as an example the force curve analysis in dynamic force spectroscopy.

  16. Application of MCR-ALS to reveal intermediate conformations in the thermally induced α-β transition of poly-L-lysine monitored by FT-IR spectroscopy

    NASA Astrophysics Data System (ADS)

    Alcaráz, Mirta R.; Schwaighofer, Andreas; Goicoechea, Héctor; Lendl, Bernhard

    2017-10-01

    Temperature-induced conformational transitions of poly-L-lysine were monitored with Fourier-transform infrared (FT-IR) spectroscopy between 10 °C and 70 °C. Chemometric analysis of dynamic IR spectra was performed by multivariate curve analysis-alternating least squares (MCR-ALS) of the amide I‧ and amide II‧ spectral region. With this approach, the pure spectral and concentration profiles of the conformational transition were obtained. Beside the initial α-helical, the intermediate random coil/extended helices and the final β-sheet structure, an additional intermediate PLL conformation was identified and attributed to a transient β-sheet structure.

  17. Spectral atmospheric observations at Nantucket Island, May 7-14, 1981

    NASA Technical Reports Server (NTRS)

    Talay, T. A.; Poole, L. R.

    1981-01-01

    An experiment was conducted by the National Langley Research Center to measure atmospheric optical conditions using a 10-channel solar spectral photometer system. This experiment was part of a larger series of multidisciplinary experiments performed in the area of Nantucket Shoals aimed at studying the dynamics of phytoplankton production processes. Analysis of the collected atmospheric data yield total and aerosol optical depths, transmittances, normalized sky radiance distributions, and total and sky irradiances. Results of this analysis may aid in atmospheric corrections of remote sensor data obtained by several sensors overflying the Nantucket Shoals area. Recommendations are presented concerning future experiments using the described solar photometer system and calibration and operational deficiencies uncovered during the experiment.

  18. Investigation of dynamic noise affecting geodynamics information in a tethered subsatellite

    NASA Technical Reports Server (NTRS)

    Gullahorn, G. E.

    1984-01-01

    The effects of a tethered satellite system's internal dynamics on the subsatellite were calculated including both overall motions (libration and attitude oscillations) and internal tether oscillations. The SKYHOOK tether simulation program was modified to operate with atmospheric density variations and to output quantities of interest. Techniques and software for analyzing the results were developed including noise spectral analysis. A program was begun for computing a stable configuration of a tether system subject to air drag. These configurations will be of use as initial conditions for SKYHOOK and, through linearized analysis, directly for stability and dynamical studies. A case study in which the subsatellite traverses an atmospheric density enhancement confirmed some theoretical calculations, and pointed out some aspects of the interaction with the tether system dynamics.

  19. Spectral functions of strongly correlated extended systems via an exact quantum embedding

    NASA Astrophysics Data System (ADS)

    Booth, George H.; Chan, Garnet Kin-Lic

    2015-04-01

    Density matrix embedding theory (DMET) [Phys. Rev. Lett. 109, 186404 (2012), 10.1103/PhysRevLett.109.186404], introduced an approach to quantum cluster embedding methods whereby the mapping of strongly correlated bulk problems to an impurity with finite set of bath states was rigorously formulated to exactly reproduce the entanglement of the ground state. The formalism provided similar physics to dynamical mean-field theory at a tiny fraction of the cost but was inherently limited by the construction of a bath designed to reproduce ground-state, static properties. Here, we generalize the concept of quantum embedding to dynamic properties and demonstrate accurate bulk spectral functions at similarly small computational cost. The proposed spectral DMET utilizes the Schmidt decomposition of a response vector, mapping the bulk dynamic correlation functions to that of a quantum impurity cluster coupled to a set of frequency-dependent bath states. The resultant spectral functions are obtained on the real-frequency axis, without bath discretization error, and allows for the construction of arbitrary dynamic correlation functions. We demonstrate the method on the one- (1D) and two-dimensional (2D) Hubbard model, where we obtain zero temperature and thermodynamic limit spectral functions, and show the trivial extension to two-particle Green's functions. This advance therefore extends the scope and applicability of DMET in condensed-matter problems as a computationally tractable route to correlated spectral functions of extended systems and provides a competitive alternative to dynamical mean-field theory for dynamic quantities.

  20. Emergence of a spectral gap in a class of random matrices associated with split graphs

    NASA Astrophysics Data System (ADS)

    Bassler, Kevin E.; Zia, R. K. P.

    2018-01-01

    Motivated by the intriguing behavior displayed in a dynamic network that models a population of extreme introverts and extroverts (XIE), we consider the spectral properties of ensembles of random split graph adjacency matrices. We discover that, in general, a gap emerges in the bulk spectrum between -1 and 0 that contains a single eigenvalue. An analytic expression for the bulk distribution is derived and verified with numerical analysis. We also examine their relation to chiral ensembles, which are associated with bipartite graphs.

  1. Interference-free coherence dynamics of gas-phase molecules using spectral focusing.

    PubMed

    Wrzesinski, Paul J; Roy, Sukesh; Gord, James R

    2012-10-08

    Spectral focusing using broadband femtosecond pulses to achieve highly selective measurements has been employed for numerous applications in spectroscopy and microspectroscopy. In this work we highlight the use of spectral focusing for selective excitation and detection of gas-phase species. Furthermore, we demonstrate that spectral focusing, coupled with time-resolved measurements based upon probe delay, allows the observation of interference-free coherence dynamics of multiple molecules and gas-phase temperature making this technique ideal for gas-phase measurements of reacting flows and combustion processes.

  2. Short-Term EEG Spectral Pattern as a Single Event in EEG Phenomenology

    PubMed Central

    Fingelkurts, Al. A; Fingelkurts, An. A

    2010-01-01

    Spectral decomposition, to this day, still remains the main analytical paradigm for the analysis of EEG oscillations. However, conventional spectral analysis assesses the mean characteristics of the EEG power spectra averaged out over extended periods of time and/or broad frequency bands, thus resulting in a “static” picture which cannot reflect adequately the underlying neurodynamic. A relatively new promising area in the study of EEG is based on reducing the signal to elementary short-term spectra of various types in accordance with the number of types of EEG stationary segments instead of using averaged power spectrum for the whole EEG. It is suggested that the various perceptual and cognitive operations associated with a mental or behavioural condition constitute a single distinguishable neurophysiological state with a distinct and reliable spectral pattern. In this case, one type of short-term spectral pattern may be considered as a single event in EEG phenomenology. To support this assumption the following issues are considered in detail: (a) the relations between local EEG short-term spectral pattern of particular type and the actual state of the neurons in underlying network and a volume conduction; (b) relationship between morphology of EEG short-term spectral pattern and the state of the underlying neurodynamical system i.e. neuronal assembly; (c) relation of different spectral pattern components to a distinct physiological mechanism; (d) relation of different spectral pattern components to different functional significance; (e) developmental changes of spectral pattern components; (f) heredity of the variance in the individual spectral pattern and its components; (g) intra-individual stability of the sets of EEG short-term spectral patterns and their percent ratio; (h) discrete dynamics of EEG short-term spectral patterns. Functional relevance (consistency) of EEG short-term spectral patterns in accordance with the changes of brain functional state, cognitive task and with different neuropsychopathologies is demonstrated. PMID:21379390

  3. Recent applications of spectral methods in fluid dynamics

    NASA Technical Reports Server (NTRS)

    Zang, T. A.; Hussaini, M. Y.

    1985-01-01

    Origins of spectral methods, especially their relation to the method of weighted residuals, are surveyed. Basic Fourier and Chebyshev spectral concepts are reviewed and demonstrated through application to simple model problems. Both collocation and tau methods are considered. These techniques are then applied to a number of difficult, nonlinear problems of hyperbolic, parabolic, elliptic and mixzed type. Fluid dynamical applications are emphasized.

  4. Atropine unmasks bed-rest effect - A spectral analysis of cardiac interbeat intervals

    NASA Technical Reports Server (NTRS)

    Goldberger, Ary L.; Goldwater, Danielle; Bhargava, Valmik

    1986-01-01

    Heart rate spectral data obtained for 10 male subjects between 35-49 years following orthostatic tolerance testing with lower body negative pressure prebed rest and after 7-10 days of bed rest, while on placebo and after intravenous atropine are analyzed. Comparison of the spectral atropine rms for subjects prebed rest and after bed rest reveal a decrease from 63 + or - 24 ms to 40 + or - 23 ms. It is observed that heart rate interval variability for subjects after bed rest and with atropine is reduced; the heart rate at bed rest with atropine is increased from 70.4 + or - 12.4 beats/min prebed rest to 83.7 + or - 18.9 beats/min; and the exercise tolerance time for subjects in the atropine prebed-rest phase (658 + or - 352 s) is higher than the bed-rest phase (505 + or - 252 s). It is noted that bed rest impairs the cardiovascular capacity to adaptively modulate physiological responses, atropine exposes bed-rest deconditioning effects, and spectral analysis is useful for studying the effects of bed-rest deconditioning on cardiac dynamics.

  5. The 2004 outburst of BHC H1743-322: analysis of spectral and timing properties using the TCAF solution

    NASA Astrophysics Data System (ADS)

    Bhattacharjee, Ayan; Banerjee, Indrani; Banerjee, Anuvab; Debnath, Dipak; Chakrabarti, Sandip K.

    2017-04-01

    The black hole transient H1743-322 exhibited several outbursts with temporal and spectral variability since its discovery in 1977. These outbursts occur at a quasi-regular recurrence period of around 0.5-2 yr, since its rediscovery in 2003 March. We investigate accretion flow dynamics around the low-mass X-ray binary H1743-322 during its 2004 outburst using the RXTE (Rossi X-Ray Timing Explorer)/PCA archival data. We use two component advective flow (TCAF) solution to analyse the spectral data. From the fits with TCAF solution, we obtain day-to-day variation of physical accretion rates of Keplerian and sub-Keplerian components, size of the Compton cloud and its other properties. Analysis of the spectral properties of the 2004 outburst by keeping fitted normalization to be in a narrow range and its timing properties in terms of the presence and absence of quasi-periodic oscillations, enable us to constrain the mass of the black hole in a range of 10.31 M⊙-14.07 M⊙ that is consistent with other estimates reported in the literature.

  6. Mapping permafrost change hot-spots with Landsat time-series

    NASA Astrophysics Data System (ADS)

    Grosse, G.; Nitze, I.

    2016-12-01

    Recent and projected future climate warming strongly affects permafrost stability over large parts of the terrestrial Arctic with local, regional and global scale consequences. The monitoring and quantification of permafrost and associated land surface changes in these areas is crucial for the analysis of hydrological and biogeochemical cycles as well as vegetation and ecosystem dynamics. However, detailed knowledge of the spatial distribution and the temporal dynamics of these processes is scarce and likely key locations of permafrost landscape dynamics may remain unnoticed. As part of the ERC funded PETA-CARB and ESA GlobPermafrost projects, we developed an automated processing chain based on data from the entire Landsat archive (excluding MSS) for the detection of permafrost change related processes and hotspots. The automated method enables us to analyze thousands of Landsat scenes, which allows for a multi-scaled spatio-temporal analysis at 30 meter spatial resolution. All necessary processing steps are carried out automatically with minimal user interaction, including data extraction, masking, reprojection, subsetting, data stacking, and calculation of multi-spectral indices. These indices, e.g. Landsat Tasseled Cap and NDVI among others, are used as proxies for land surface conditions, such as vegetation status, moisture or albedo. Finally, a robust trend analysis is applied to each multi-spectral index and each pixel over the entire observation period of up to 30 years from 1985 to 2015, depending on data availability. Large transects of around 2 million km² across different permafrost types in Siberia and North America have been processed. Permafrost related or influencing landscape dynamics were detected within the trend analysis, including thermokarst lake dynamics, fires, thaw slumps, and coastal dynamics. The produced datasets will be distributed to the community as part of the ERC PETA-CARB and ESA GlobPermafrost projects. Users are encouraged to provide feedback and ground truth data for a continuous improvement of our methodology and datasets, which will lead to a better understanding of the spatial and temporal distribution of changes within the vulnerable permafrost zone.

  7. High-Frequency Electron Paramagnetic Resonance Spectroscopy of Nitroxide-Functionalized Nanodiamonds in Aqueous Solution.

    PubMed

    Akiel, R D; Stepanov, V; Takahashi, S

    2017-06-01

    Nanodiamond (ND) is an attractive class of nanomaterial for fluorescent labeling, magnetic sensing of biological molecules, and targeted drug delivery. Many of those applications require tethering of target biological molecules on the ND surface. Even though many approaches have been developed to attach macromolecules to the ND surface, it remains challenging to characterize dynamics of tethered molecule. Here, we show high-frequency electron paramagnetic resonance (HF EPR) spectroscopy of nitroxide-functionalized NDs. Nitroxide radical is a commonly used spin label to investigate dynamics of biological molecules. In the investigation, we developed a sample holder to overcome water absorption of HF microwave. Then, we demonstrated HF EPR spectroscopy of nitroxide-functionalized NDs in aqueous solution and showed clear spectral distinction of ND and nitroxide EPR signals. Moreover, through EPR spectral analysis, we investigate dynamics of nitroxide radicals on the ND surface. The demonstration sheds light on the use of HF EPR spectroscopy to investigate biological molecule-functionalized nanoparticles.

  8. Nouvelles techniques pratiques pour la modelisation du comportement dynamique des systèmes eau-structure

    NASA Astrophysics Data System (ADS)

    Miquel, Benjamin

    The dynamic or seismic behavior of hydraulic structures is, as for conventional structures, essential to assure protection of human lives. These types of analyses also aim at limiting structural damage caused by an earthquake to prevent rupture or collapse of the structure. The particularity of these hydraulic structures is that not only the internal displacements are caused by the earthquake, but also by the hydrodynamic loads resulting from fluid-structure interaction. This thesis reviews the existing complex and simplified methods to perform such dynamic analysis for hydraulic structures. For the complex existing methods, attention is placed on the difficulties arising from their use. Particularly, interest is given in this work on the use of transmitting boundary conditions to simulate the semi infinity of reservoirs. A procedure has been developed to estimate the error that these boundary conditions can introduce in finite element dynamic analysis. Depending on their formulation and location, we showed that they can considerably affect the response of such fluid-structure systems. For practical engineering applications, simplified procedures are still needed to evaluate the dynamic behavior of structures in contact with water. A review of the existing simplified procedures showed that these methods are based on numerous simplifications that can affect the prediction of the dynamic behavior of such systems. One of the main objectives of this thesis has been to develop new simplified methods that are more accurate than those existing. First, a new spectral analysis method has been proposed. Expressions for the fundamental frequency of fluid-structure systems, key parameter of spectral analysis, have been developed. We show that this new technique can easily be implemented in a spreadsheet or program, and that its calculation time is near instantaneous. When compared to more complex analytical or numerical method, this new procedure yields excellent prediction of the dynamic behavior of fluid-structure systems. Spectral analyses ignore the transient and oscillatory nature of vibrations. When such dynamic analyses show that some areas of the studied structure undergo excessive stresses, time history analyses allow a better estimate of the extent of these zones as well as a time notion of these excessive stresses. Furthermore, the existing spectral analyses methods for fluid-structure systems account only for the static effect of higher modes. Thought this can generally be sufficient for dams, for flexible structures the dynamic effect of these modes should be accounted for. New methods have been developed for fluid-structure systems to account for these observations as well as the flexibility of foundations. A first method was developed to study structures in contact with one or two finite or infinite water domains. This new technique includes flexibility of structures and foundations as well as the dynamic effect of higher vibration modes and variations of the levels of the water domains. Extension of this method was performed to study beam structures in contact with fluids. These new developments have also allowed extending existing analytical formulations of the dynamic properties of a dry beam to a new formulation that includes effect of fluid-structure interaction. The method yields a very good estimate of the dynamic behavior of beam-fluid systems or beam like structures in contact with fluid. Finally, a Modified Accelerogram Method (MAM) has been developed to modify the design earthquake into a new accelerogram that directly accounts for the effect of fluid-structure interaction. This new accelerogram can therefore be applied directly to the dry structure (i.e. without water) in order to calculate the dynamic response of the fluid-structure system. This original technique can include numerous parameters that influence the dynamic response of such systems and allows to treat analytically the fluid-structure interaction while keeping the advantages of finite element modeling.

  9. Centaur feedline dynamics study using power spectral methods. [fundamental mode resonant frequencies of RL-10 oxygen and hydrogen feed lines

    NASA Technical Reports Server (NTRS)

    Lorenzo, C. F.

    1974-01-01

    Tests were conducted to determine the dynamic characteristics of the Centaur/RL-10 oxygen and hydrogen feedlines. The fundamental-mode resonant frequencies were determined by applying power spectral methods to noise-generated data from hot firings of the RL-10 engine. The effect of net positive suction pressure of the main feed pumps on resonant frequency characteristics was determined to be a straight-line relation. Power spectral methods were also used to determine the dynamic characteristics of the boost pumps.

  10. Generalized five-dimensional dynamic and spectral factor analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    El Fakhri, Georges; Sitek, Arkadiusz; Zimmerman, Robert E.

    2006-04-15

    We have generalized the spectral factor analysis and the factor analysis of dynamic sequences (FADS) in SPECT imaging to a five-dimensional general factor analysis model (5D-GFA), where the five dimensions are the three spatial dimensions, photon energy, and time. The generalized model yields a significant advantage in terms of the ratio of the number of equations to that of unknowns in the factor analysis problem in dynamic SPECT studies. We solved the 5D model using a least-squares approach. In addition to the traditional non-negativity constraints, we constrained the solution using a priori knowledge of both time and energy, assuming thatmore » primary factors (spectra) are Gaussian-shaped with full-width at half-maximum equal to gamma camera energy resolution. 5D-GFA was validated in a simultaneous pre-/post-synaptic dual isotope dynamic phantom study where {sup 99m}Tc and {sup 123}I activities were used to model early Parkinson disease studies. 5D-GFA was also applied to simultaneous perfusion/dopamine transporter (DAT) dynamic SPECT in rhesus monkeys. In the striatal phantom, 5D-GFA yielded significantly more accurate and precise estimates of both primary {sup 99m}Tc (bias=6.4%{+-}4.3%) and {sup 123}I (-1.7%{+-}6.9%) time activity curves (TAC) compared to conventional FADS (biases=15.5%{+-}10.6% in {sup 99m}Tc and 8.3%{+-}12.7% in {sup 123}I, p<0.05). Our technique was also validated in two primate dynamic dual isotope perfusion/DAT transporter studies. Biases of {sup 99m}Tc-HMPAO and {sup 123}I-DAT activity estimates with respect to estimates obtained in the presence of only one radionuclide (sequential imaging) were significantly lower with 5D-GFA (9.4%{+-}4.3% for {sup 99m}Tc-HMPAO and 8.7%{+-}4.1% for {sup 123}I-DAT) compared to biases greater than 15% for volumes of interest (VOI) over the reconstructed volumes (p<0.05). 5D-GFA is a novel and promising approach in dynamic SPECT imaging that can also be used in other modalities. It allows accurate and precise dynamic analysis while compensating for Compton scatter and cross-talk.« less

  11. Multi-Dimensional High Order Essentially Non-Oscillatory Finite Difference Methods in Generalized Coordinates

    NASA Technical Reports Server (NTRS)

    Shu, Chi-Wang

    1998-01-01

    This project is about the development of high order, non-oscillatory type schemes for computational fluid dynamics. Algorithm analysis, implementation, and applications are performed. Collaborations with NASA scientists have been carried out to ensure that the research is relevant to NASA objectives. The combination of ENO finite difference method with spectral method in two space dimension is considered, jointly with Cai [3]. The resulting scheme behaves nicely for the two dimensional test problems with or without shocks. Jointly with Cai and Gottlieb, we have also considered one-sided filters for spectral approximations to discontinuous functions [2]. We proved theoretically the existence of filters to recover spectral accuracy up to the discontinuity. We also constructed such filters for practical calculations.

  12. Dynamics of crystalline acetanilide: Analysis using neutron scattering and computer simulation

    NASA Astrophysics Data System (ADS)

    Hayward, R. L.; Middendorf, H. D.; Wanderlingh, U.; Smith, J. C.

    1995-04-01

    The unusual temperature dependence of several optical spectroscopic vibrational bands in crystalline acetanilide has been interpreted as providing evidence for dynamic localization. Here we examine the vibrational dynamics of crystalline acetanilide over a spectral range of ˜20-4000 cm-1 using incoherent neutron scattering experiments, phonon normal mode calculations and molecular dynamics simulations. A molecular mechanics energy function is parametrized and used to perform the normal mode analyses in the full configurational space of the crystal i.e., including the intramolecular and intermolecular degrees of freedom. One- and multiphonon incoherent inelastic neutron scattering intensities are calculated from harmonic analyses in the first Brillouin zone and compared with the experimental data presented here. Phonon dispersion relations and mean-square atomic displacements are derived from the harmonic model and compared with data derived from coherent inelastic neutron scattering and neutron and x-ray diffraction. To examine the temperature effects on the vibrations the full, anharmonic potential function is used in molecular dynamics simulations of the crystal at 80, 140, and 300 K. Several, but not all, of the spectral features calculated from the molecular dynamics simulations exhibit temperature-dependent behavior in agreement with experiment. The significance of the results for the interpretation of the optical spectroscopic results and possible improvements to the model are discussed.

  13. Glimpses of Kolmogorov's spectral energy dynamics in nonlinear acoustic waves

    NASA Astrophysics Data System (ADS)

    Gupta, Prateek; Scalo, Carlo

    2017-11-01

    Gupta, Lodato, and Scalo (AIAA 2017) have demonstrated the existence of an equilibrium spectral energy cascade in shock waves formed as a result of continued modal thermoacoustic amplification consistent with Kolmogorov's theory for high-Reynolds-number hydrodynamic turbulence. In this talk we discuss the derivation of a perturbation energy density norm that guarantees energy conservation during the nonlinear wave steepening process, analogous to inertial subrange turbulent energy cascade dynamics. The energy cascade is investigated via a bi-spectral analysis limited to wave-numbers and frequencies lower than the ones associated with the shock, analogous to the viscous dissipation length scale in turbulence. The proposed norm is derived by recombining second-order nonlinear acoustic equations and is positive definite; moreover, it decays to zero in the presence of viscous dissipation and is hence classifiable as a Lyapunov function of acoustic perturbation variables. The cumulative energy spectrum wavenumber distribution demonstrates a -3/2 decay law in the inertial range. The governing equation for the thus-derived energy norm highlights terms responsible for energy cascade towards higher harmonics, analogous to vortex stretching terms in hydrodynamic turbulence.

  14. [Comparisons and analysis of the spectral response functions' difference between FY-2E's and FY2C's split window channels].

    PubMed

    Zhang, Yong; Li, Yuan; Rong, Zhi-Guo

    2010-06-01

    Remote sensors' channel spectral response function (SRF) was one of the key factors to influence the quantitative products' inversion algorithm, accuracy and the geophysical characteristics. Aiming at the adjustments of FY-2E's split window channels' SRF, detailed comparisons between the FY-2E and FY-2C corresponding channels' SRF differences were carried out based on three data collections: the NOAA AVHRR corresponding channels' calibration look up tables, field measured water surface radiance and atmospheric profiles at Lake Qinghai and radiance calculated from the PLANK function within all dynamic range of FY-2E/C. The results showed that the adjustments of FY-2E's split window channels' SRF would result in the spectral range's movements and influence the inversion algorithms of some ground quantitative products. On the other hand, these adjustments of FY-2E SRFs would increase the brightness temperature differences between FY-2E's two split window channels within all dynamic range relative to FY-2C's. This would improve the inversion ability of FY-2E's split window channels.

  15. An Introduction to Computational Physics

    NASA Astrophysics Data System (ADS)

    Pang, Tao

    2010-07-01

    Preface to first edition; Preface; Acknowledgements; 1. Introduction; 2. Approximation of a function; 3. Numerical calculus; 4. Ordinary differential equations; 5. Numerical methods for matrices; 6. Spectral analysis; 7. Partial differential equations; 8. Molecular dynamics simulations; 9. Modeling continuous systems; 10. Monte Carlo simulations; 11. Genetic algorithm and programming; 12. Numerical renormalization; References; Index.

  16. Temporal and spectral characteristics of dynamic functional connectivity between resting-state networks reveal information beyond static connectivity

    PubMed Central

    Yeh, Hsiang J.; Guindani, Michele; Vannucci, Marina; Haneef, Zulfi; Stern, John M.

    2018-01-01

    Estimation of functional connectivity (FC) has become an increasingly powerful tool for investigating healthy and abnormal brain function. Static connectivity, in particular, has played a large part in guiding conclusions from the majority of resting-state functional MRI studies. However, accumulating evidence points to the presence of temporal fluctuations in FC, leading to increasing interest in estimating FC as a dynamic quantity. One central issue that has arisen in this new view of connectivity is the dramatic increase in complexity caused by dynamic functional connectivity (dFC) estimation. To computationally handle this increased complexity, a limited set of dFC properties, primarily the mean and variance, have generally been considered. Additionally, it remains unclear how to integrate the increased information from dFC into pattern recognition techniques for subject-level prediction. In this study, we propose an approach to address these two issues based on a large number of previously unexplored temporal and spectral features of dynamic functional connectivity. A Generalized Autoregressive Conditional Heteroskedasticity (GARCH) model is used to estimate time-varying patterns of functional connectivity between resting-state networks. Time-frequency analysis is then performed on dFC estimates, and a large number of previously unexplored temporal and spectral features drawn from signal processing literature are extracted for dFC estimates. We apply the investigated features to two neurologic populations of interest, healthy controls and patients with temporal lobe epilepsy, and show that the proposed approach leads to substantial increases in predictive performance compared to both traditional estimates of static connectivity as well as current approaches to dFC. Variable importance is assessed and shows that there are several quantities that can be extracted from dFC signal which are more informative than the traditional mean or variance of dFC. This work illuminates many previously unexplored facets of the dynamic properties of functional connectivity between resting-state networks, and provides a platform for dynamic functional connectivity analysis that facilitates its usage as an investigative measure for healthy as well as abnormal brain function. PMID:29320526

  17. Spectral properties of the temporal evolution of brain network structure.

    PubMed

    Wang, Rong; Zhang, Zhen-Zhen; Ma, Jun; Yang, Yong; Lin, Pan; Wu, Ying

    2015-12-01

    The temporal evolution properties of the brain network are crucial for complex brain processes. In this paper, we investigate the differences in the dynamic brain network during resting and visual stimulation states in a task-positive subnetwork, task-negative subnetwork, and whole-brain network. The dynamic brain network is first constructed from human functional magnetic resonance imaging data based on the sliding window method, and then the eigenvalues corresponding to the network are calculated. We use eigenvalue analysis to analyze the global properties of eigenvalues and the random matrix theory (RMT) method to measure the local properties. For global properties, the shifting of the eigenvalue distribution and the decrease in the largest eigenvalue are linked to visual stimulation in all networks. For local properties, the short-range correlation in eigenvalues as measured by the nearest neighbor spacing distribution is not always sensitive to visual stimulation. However, the long-range correlation in eigenvalues as evaluated by spectral rigidity and number variance not only predicts the universal behavior of the dynamic brain network but also suggests non-consistent changes in different networks. These results demonstrate that the dynamic brain network is more random for the task-positive subnetwork and whole-brain network under visual stimulation but is more regular for the task-negative subnetwork. Our findings provide deeper insight into the importance of spectral properties in the functional brain network, especially the incomparable role of RMT in revealing the intrinsic properties of complex systems.

  18. Spectral properties of the temporal evolution of brain network structure

    NASA Astrophysics Data System (ADS)

    Wang, Rong; Zhang, Zhen-Zhen; Ma, Jun; Yang, Yong; Lin, Pan; Wu, Ying

    2015-12-01

    The temporal evolution properties of the brain network are crucial for complex brain processes. In this paper, we investigate the differences in the dynamic brain network during resting and visual stimulation states in a task-positive subnetwork, task-negative subnetwork, and whole-brain network. The dynamic brain network is first constructed from human functional magnetic resonance imaging data based on the sliding window method, and then the eigenvalues corresponding to the network are calculated. We use eigenvalue analysis to analyze the global properties of eigenvalues and the random matrix theory (RMT) method to measure the local properties. For global properties, the shifting of the eigenvalue distribution and the decrease in the largest eigenvalue are linked to visual stimulation in all networks. For local properties, the short-range correlation in eigenvalues as measured by the nearest neighbor spacing distribution is not always sensitive to visual stimulation. However, the long-range correlation in eigenvalues as evaluated by spectral rigidity and number variance not only predicts the universal behavior of the dynamic brain network but also suggests non-consistent changes in different networks. These results demonstrate that the dynamic brain network is more random for the task-positive subnetwork and whole-brain network under visual stimulation but is more regular for the task-negative subnetwork. Our findings provide deeper insight into the importance of spectral properties in the functional brain network, especially the incomparable role of RMT in revealing the intrinsic properties of complex systems.

  19. Nonlinear dynamics of cardiovascular ageing

    PubMed Central

    Shiogai, Y.; Stefanovska, A.; McClintock, P.V.E.

    2010-01-01

    The application of methods drawn from nonlinear and stochastic dynamics to the analysis of cardiovascular time series is reviewed, with particular reference to the identification of changes associated with ageing. The natural variability of the heart rate (HRV) is considered in detail, including the respiratory sinus arrhythmia (RSA) corresponding to modulation of the instantaneous cardiac frequency by the rhythm of respiration. HRV has been intensively studied using traditional spectral analyses, e.g. by Fourier transform or autoregressive methods, and, because of its complexity, has been used as a paradigm for testing several proposed new methods of complexity analysis. These methods are reviewed. The application of time–frequency methods to HRV is considered, including in particular the wavelet transform which can resolve the time-dependent spectral content of HRV. Attention is focused on the cardio-respiratory interaction by introduction of the respiratory frequency variability signal (RFV), which can be acquired simultaneously with HRV by use of a respiratory effort transducer. Current methods for the analysis of interacting oscillators are reviewed and applied to cardio-respiratory data, including those for the quantification of synchronization and direction of coupling. These reveal the effect of ageing on the cardio-respiratory interaction through changes in the mutual modulation of the instantaneous cardiac and respiratory frequencies. Analyses of blood flow signals recorded with laser Doppler flowmetry are reviewed and related to the current understanding of how endothelial-dependent oscillations evolve with age: the inner lining of the vessels (the endothelium) is shown to be of crucial importance to the emerging picture. It is concluded that analyses of the complex and nonlinear dynamics of the cardiovascular system can illuminate the mechanisms of blood circulation, and that the heart, the lungs and the vascular system function as a single entity in dynamical terms. Clear evidence is found for dynamical ageing. PMID:20396667

  20. Symmetry breaking, mixing, instability, and low-frequency variability in a minimal Lorenz-like system.

    PubMed

    Lucarini, Valerio; Fraedrich, Klaus

    2009-08-01

    Starting from the classical Saltzman two-dimensional convection equations, we derive via a severe spectral truncation a minimal 10 ODE system which includes the thermal effect of viscous dissipation. Neglecting this process leads to a dynamical system which includes a decoupled generalized Lorenz system. The consideration of this process breaks an important symmetry and couples the dynamics of fast and slow variables, with the ensuing modifications to the structural properties of the attractor and of the spectral features. When the relevant nondimensional number (Eckert number Ec) is different from zero, an additional time scale of O(Ec(-1)) is introduced in the system, as shown with standard multiscale analysis and made clear by several numerical evidences. Moreover, the system is ergodic and hyperbolic, the slow variables feature long-term memory with 1/f(3/2) power spectra, and the fast variables feature amplitude modulation. Increasing the strength of the thermal-viscous feedback has a stabilizing effect, as both the metric entropy and the Kaplan-Yorke attractor dimension decrease monotonically with Ec. The analyzed system features very rich dynamics: it overcomes some of the limitations of the Lorenz system and might have prototypical value in relevant processes in complex systems dynamics, such as the interaction between slow and fast variables, the presence of long-term memory, and the associated extreme value statistics. This analysis shows how neglecting the coupling of slow and fast variables only on the basis of scale analysis can be catastrophic. In fact, this leads to spurious invariances that affect essential dynamical properties (ergodicity, hyperbolicity) and that cause the model losing ability in describing intrinsically multiscale processes.

  1. Nonlinear dynamics of cardiovascular ageing

    NASA Astrophysics Data System (ADS)

    Shiogai, Y.; Stefanovska, A.; McClintock, P. V. E.

    2010-03-01

    The application of methods drawn from nonlinear and stochastic dynamics to the analysis of cardiovascular time series is reviewed, with particular reference to the identification of changes associated with ageing. The natural variability of the heart rate (HRV) is considered in detail, including the respiratory sinus arrhythmia (RSA) corresponding to modulation of the instantaneous cardiac frequency by the rhythm of respiration. HRV has been intensively studied using traditional spectral analyses, e.g. by Fourier transform or autoregressive methods, and, because of its complexity, has been used as a paradigm for testing several proposed new methods of complexity analysis. These methods are reviewed. The application of time-frequency methods to HRV is considered, including in particular the wavelet transform which can resolve the time-dependent spectral content of HRV. Attention is focused on the cardio-respiratory interaction by introduction of the respiratory frequency variability signal (RFV), which can be acquired simultaneously with HRV by use of a respiratory effort transducer. Current methods for the analysis of interacting oscillators are reviewed and applied to cardio-respiratory data, including those for the quantification of synchronization and direction of coupling. These reveal the effect of ageing on the cardio-respiratory interaction through changes in the mutual modulation of the instantaneous cardiac and respiratory frequencies. Analyses of blood flow signals recorded with laser Doppler flowmetry are reviewed and related to the current understanding of how endothelial-dependent oscillations evolve with age: the inner lining of the vessels (the endothelium) is shown to be of crucial importance to the emerging picture. It is concluded that analyses of the complex and nonlinear dynamics of the cardiovascular system can illuminate the mechanisms of blood circulation, and that the heart, the lungs and the vascular system function as a single entity in dynamical terms. Clear evidence is found for dynamical ageing.

  2. Experimental Investigation of Spectra of Dynamical Maps and their Relation to non-Markovianity

    NASA Astrophysics Data System (ADS)

    Yu, Shang; Wang, Yi-Tao; Ke, Zhi-Jin; Liu, Wei; Meng, Yu; Li, Zhi-Peng; Zhang, Wen-Hao; Chen, Geng; Tang, Jian-Shun; Li, Chuan-Feng; Guo, Guang-Can

    2018-02-01

    The spectral theorem of von Neumann has been widely applied in various areas, such as the characteristic spectral lines of atoms. It has been recently proposed that dynamical evolution also possesses spectral lines. As the most intrinsic property of evolution, the behavior of these spectra can, in principle, exhibit almost every feature of this evolution, among which the most attractive topic is non-Markovianity, i.e., the memory effects during evolution. Here, we develop a method to detect these spectra, and moreover, we experimentally examine the relation between the spectral behavior and non-Markovianity by engineering the environment to prepare dynamical maps with different non-Markovian properties and then detecting the dynamical behavior of the spectral values. These spectra will lead to a witness for essential non-Markovianity. We also experimentally verify another simplified witness method for essential non-Markovianity. Interestingly, in both cases, we observe the sudden transition from essential non-Markovianity to something else. Our work shows the role of the spectra of evolution in the studies of non-Makovianity and provides the alternative methods to characterize non-Markovian behavior.

  3. Algorithmic trends in computational fluid dynamics; The Institute for Computer Applications in Science and Engineering (ICASE)/LaRC Workshop, NASA Langley Research Center, Hampton, VA, US, Sep. 15-17, 1991

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y. (Editor); Kumar, A. (Editor); Salas, M. D. (Editor)

    1993-01-01

    The purpose here is to assess the state of the art in the areas of numerical analysis that are particularly relevant to computational fluid dynamics (CFD), to identify promising new developments in various areas of numerical analysis that will impact CFD, and to establish a long-term perspective focusing on opportunities and needs. Overviews are given of discretization schemes, computational fluid dynamics, algorithmic trends in CFD for aerospace flow field calculations, simulation of compressible viscous flow, and massively parallel computation. Also discussed are accerelation methods, spectral and high-order methods, multi-resolution and subcell resolution schemes, and inherently multidimensional schemes.

  4. The Anomalous Influence of Spectral Resolution on Pulsed THz Time Domain Spectroscopy under Real Conditions

    PubMed Central

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.

    2017-01-01

    We have studied the spectral resolution influence on the accuracy of the substance detection and identification at using a broadband THz pulse measured under real conditions (at a distance of more than 3 m from a THz emitter in ambient air with a relative humidity of about 50%). We show that increasing spectral resolution leads to manifestation of small-scale perturbations (random fluctuations) in the signal spectrum caused by the influence of the environment or the sample structure. Decreasing the spectral resolution allows us to exclude from consideration this small-scale modulation of the signal as well as to detect the water vapor absorption frequencies. This fact is important in practice because it allows us to increase the signal processing rate. In order to increase the detection reliability, it is advisable to decrease the spectral resolution up to values of not more than 40% of the corresponding spectral line bandwidth. The method of spectral dynamics analysis together with the integral correlation criteria is used for the substance detection and identification. Neutral substances such as chocolate and cookies are used as the samples in the physical experiment. PMID:29231895

  5. Suspension system vibration analysis with regard to variable type ability to smooth road irregularities

    NASA Astrophysics Data System (ADS)

    Rykov, S. P.; Rykova, O. A.; Koval, V. S.; Makhno, D. E.; Fedotov, K. V.

    2018-03-01

    The paper aims to analyze vibrations of the dynamic system equivalent of the suspension system with regard to tyre ability to smooth road irregularities. The research is based on static dynamics for linear systems of automated control, methods of correlation, spectral and numerical analysis. Input of new data on the smoothing effect of the pneumatic tyre reflecting changes of a contact area between the wheel and road under vibrations of the suspension makes the system non-linear which requires using numerical analysis methods. Taking into account the variable smoothing ability of the tyre when calculating suspension vibrations, one can approximate calculation and experimental results and improve the constant smoothing ability of the tyre.

  6. Improving the Dynamic Emissivity Measurement Above 1000 K by Extending the Spectral Range

    NASA Astrophysics Data System (ADS)

    Urban, D.; Krenek, S.; Anhalt, K.; Taubert, D. R.

    2018-01-01

    To improve the dynamic emissivity measurement, which is based on the laser-flash method, an array spectrometer is characterized regarding its spectral radiance responsivity for a spectrally resolved emissivity measurement above 1000 K in the wavelength range between 550 nm and 1100 nm. Influences like dark signals, the nonlinearity of the detector, the size-of-source effect, wavelength calibration and the spectral radiance responsivity of the system are investigated to obtain an uncertainty budget for the spectral radiance and emissivity measurements. Uncertainties for the spectral radiance of lower than a relative 2 % are achieved for wavelengths longer than 550 nm. Finally, the spectral emissivity of a graphite sample was determined in the temperature range between 1000 K and 1700 K, and the experimental data show a good repeatability and agreement with literature data.

  7. Multi-spectral fiber spectroscopy in 0,4-16μm range for biomedical applications(Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Artyushenko, Viacheslav

    2017-02-01

    Various biomedical applications of fiber optics in a broad spectral range 0,4-16μm span from endoscopic imaging and Photo Dynamic Diagnostics (PDD) to laser power delivery for minimal invasive laser surgery, tissue coagulation and welding, Photo Dynamic Therapy (PDT), etc. Present review will highlight the latest results in advanced fiber solutions for a precise tissue diagnostics and control of some therapy methods - for so called "theranostic". Spectral fiber sensing for label free analysis of tissue composition helps to differentiate malignant and normal tissue to secure minimal invasive, but complete tumor removal or treatment. All key methods of Raman, fluorescence, diffuse reflection & MIR-absorption spectroscopy will be compared when used for the same spot of tissue - to select the most specific, sensitive and accurate method or to combine them for the synergy enhanced effect. The most informative spectral features for distinct organs/ tumor can be used to design special fiber sensors to be developed for portable and low cost applications with modern IT-features. Examples of multi-spectral tissue diagnostics promising for the future clinical applications will be presented to enable reduced mortality from cancer in the future. Translation of described methods into clinical practice will be discussed in comparison with the other method of optical diagnostics which should enhance modern medicine by less invasive, more precise and more effective methods of therapy to be fused with in-vivo diagnostics sensors & systems.

  8. Optimal spectral tracking--adapting to dynamic regime change.

    PubMed

    Brittain, John-Stuart; Halliday, David M

    2011-01-30

    Real world data do not always obey the statistical restraints imposed upon them by sophisticated analysis techniques. In spectral analysis for instance, an ergodic process--the interchangeability of temporal for spatial averaging--is assumed for a repeat-trial design. Many evolutionary scenarios, such as learning and motor consolidation, do not conform to such linear behaviour and should be approached from a more flexible perspective. To this end we previously introduced the method of optimal spectral tracking (OST) in the study of trial-varying parameters. In this extension to our work we modify the OST routines to provide an adaptive implementation capable of reacting to dynamic transitions in the underlying system state. In so doing, we generalise our approach to characterise both slow-varying and rapid fluctuations in time-series, simultaneously providing a metric of system stability. The approach is first applied to a surrogate dataset and compared to both our original non-adaptive solution and spectrogram approaches. The adaptive OST is seen to display fast convergence and desirable statistical properties. All three approaches are then applied to a neurophysiological recording obtained during a study on anaesthetic monitoring. Local field potentials acquired from the posterior hypothalamic region of a deep brain stimulation patient undergoing anaesthesia were analysed. The characterisation of features such as response delay, time-to-peak and modulation brevity are considered. Copyright © 2010 Elsevier B.V. All rights reserved.

  9. A model with chaotic scattering and reduction of wave packets

    NASA Astrophysics Data System (ADS)

    Guarneri, Italo

    2018-03-01

    Some variants of Smilansky’s model of a particle interacting with harmonic oscillators are examined in the framework of scattering theory. A dynamical proof is given of the existence of wave operators. Analysis of a classical version of the model provides a transparent picture for the spectral transition to which the quantum model owes its renown, and for the underlying dynamical behaviour. The model is thereby classified as an extreme case of chaotic scattering, with aspects related to wave packet reduction and irreversibility.

  10. Shock Layer Radiation Measurements and Analysis for Mars Entry

    NASA Technical Reports Server (NTRS)

    Bose, Deepak; Grinstead, Jay Henderson; Bogdanoff, David W.; Wright, Michael J.

    2009-01-01

    NASA's In-Space Propulsion program is supporting the development of shock radiation transport models for aerocapture missions to Mars. A comprehensive test series in the NASA Antes Electric Arc Shock Tube facility at a representative flight condition was recently completed. The facility optical instrumentation enabled spectral measurements of shocked gas radiation from the vacuum ultraviolet to the near infrared. The instrumentation captured the nonequilibrium post-shock excitation and relaxation dynamics of dispersed spectral features. A description of the shock tube facility, optical instrumentation, and examples of the test data are presented. Comparisons of measured spectra with model predictions are also made.

  11. Quantifying Grassland-to-Woodland Transitions and the Implications for Carbon and Nitrogen Dynamics in the Southwest United States

    NASA Technical Reports Server (NTRS)

    Wessman, Carol A.; Archer, Steven R.; Asner, Gregory P.; Bateson, C. Ann

    2004-01-01

    Replacement of grasslands and savannas by shrublands and woodlands has been widely reported in tropical, temperate and high-latitude rangelands worldwide (Archer 1994). These changes in vegetation structure may reflect historical shifts in climate and land use; and are likely to influence biodiversity, productivity, above- and below ground carbon and nitrogen sequestration and biophysical aspects of land surface-atmosphere interactions. The goal of our proposed research is to investigate how changes in the relative abundance of herbaceous and woody vegetation affect carbon and nitrogen dynamics across heterogeneous savannas and shrub/woodlands. By linking actual land-cover composition (derived through spectral mixture analysis of AVIRIS, TM, and AVHRR imagery) with a process-based ecosystem model, we will generate explicit predictions of the C and N storage in plants and soils resulting from changes in vegetation structure. Our specific objectives will be to (1) continue development and test applications of spectral mixture analysis across grassland-to-woodland transitions; (2) quantify temporal changes in plant and soil C and N storage and turnover for remote sensing and process model parameterization and verification; and (3) couple landscape fraction maps to an ecosystem simulation model to observe biogeochemical dynamics under changing landscape structure and climatological forcings.

  12. Interferometric Near-Infrared Spectroscopy (iNIRS) for determination of optical and dynamical properties of turbid media

    PubMed Central

    Borycki, Dawid; Kholiqov, Oybek; Chong, Shau Poh; Srinivasan, Vivek J.

    2016-01-01

    We introduce and implement interferometric near-infrared spectroscopy (iNIRS), which simultaneously extracts optical and dynamical properties of turbid media through analysis of a spectral interference fringe pattern. The spectral interference fringe pattern is measured using a Mach-Zehnder interferometer with a frequency-swept narrow linewidth laser. Fourier analysis of the detected signal is used to determine time-of-flight (TOF)-resolved intensity, which is then analyzed over time to yield TOF-resolved intensity autocorrelations. This approach enables quantification of optical properties, which is not possible in conventional, continuous-wave near-infrared spectroscopy (NIRS). Furthermore, iNIRS quantifies scatterer motion based on TOF-resolved autocorrelations, which is a feature inaccessible by well-established diffuse correlation spectroscopy (DCS) techniques. We prove this by determining TOF-resolved intensity and temporal autocorrelations for light transmitted through diffusive fluid phantoms with optical thicknesses of up to 55 reduced mean free paths (approximately 120 scattering events). The TOF-resolved intensity is used to determine optical properties with time-resolved diffusion theory, while the TOF-resolved intensity autocorrelations are used to determine dynamics with diffusing wave spectroscopy. iNIRS advances the capabilities of diffuse optical methods and is suitable for in vivo tissue characterization. Moreover, iNIRS combines NIRS and DCS capabilities into a single modality. PMID:26832264

  13. Dynamic Spectral Structure Specifies Vowels for Adults and Children

    PubMed Central

    Nittrouer, Susan; Lowenstein, Joanna H.

    2014-01-01

    The dynamic specification account of vowel recognition suggests that formant movement between vowel targets and consonant margins is used by listeners to recognize vowels. This study tested that account by measuring contributions to vowel recognition of dynamic (i.e., time-varying) spectral structure and coarticulatory effects on stationary structure. Adults and children (four-and seven-year-olds) were tested with three kinds of consonant-vowel-consonant syllables: (1) unprocessed; (2) sine waves that preserved both stationary coarticulated and dynamic spectral structure; and (3) vocoded signals that primarily preserved that stationary, but not dynamic structure. Sections of two lengths were removed from syllable middles: (1) half the vocalic portion; and (2) all but the first and last three pitch periods. Adults performed accurately with unprocessed and sine-wave signals, as long as half the syllable remained; their recognition was poorer for vocoded signals, but above chance. Seven-year-olds performed more poorly than adults with both sorts of processed signals, but disproportionately worse with vocoded than sine-wave signals. Most four-year-olds were unable to recognize vowels at all with vocoded signals. Conclusions were that both dynamic and stationary coarticulated structures support vowel recognition for adults, but children attend to dynamic spectral structure more strongly because early phonological organization favors whole words. PMID:25536845

  14. Scaling properties and symmetrical patterns in the epidemiology of rotavirus infection.

    PubMed Central

    José, Marco V; Bishop, Ruth F

    2003-01-01

    The rich epidemiological database of the incidence of rotavirus, as a cause of severe diarrhoea in young children, coupled with knowledge of the natural history of the infection, can make this virus a paradigm for studies of epidemic dynamics. The cyclic recurrence of childhood rotavirus epidemics in unvaccinated populations provides one of the best documented phenomena in population dynamics. This paper makes use of epidemiological data on rotavirus infection in young children admitted to hospital in Melbourne, Australia from 1977 to 2000. Several mathematical methods were used to characterize the overall dynamics of rotavirus infections as a whole and individually as serotypes G1, G2, G3, G4 and G9. These mathematical methods are as follows: seasonal autoregressive integrated moving-average (SARIMA) models, power spectral density (PSD), higher-order spectral analysis (HOSA) (bispectrum estimation and quadratic phase coupling (QPC)), detrended fluctuation analysis (DFA), wavelet analysis (WA) and a surrogate data analysis technique. Each of these techniques revealed different dynamic aspects of rotavirus epidemiology. In particular, we confirm the existence of an annual, biannual and a quinquennial period but additionally we found other embedded cycles (e.g. ca. 3 years). There seems to be an overall unique geometric and dynamic structure of the data despite the apparent changes in the dynamics of the last years. The inherent dynamics seems to be conserved regardless of the emergence of new serotypes, the re-emergence of old serotypes or the transient disappearance of a particular serotype. More importantly, the dynamics of all serotypes is multiple synchronized so that they behave as a single entity at the epidemic level. Overall, the whole dynamics follow a scale-free power-law fractal scaling behaviour. We found that there are three different scaling regions in the time-series, suggesting that processes influencing the epidemic dynamics of rotavirus over less than 12 months differ from those that operate between 1 and ca. 3 years, as well as those between 3 and ca. 5 years. To discard the possibility that the observed patterns could be due to artefacts, we applied a surrogate data analysis technique which enabled us to discern if only random components or linear features of the incidence of rotavirus contribute to its dynamics. The global dynamics of the epidemic is portrayed by wavelet-based incidence analysis. The resulting wavelet transform of the incidence of rotavirus crisply reveals a repeating pattern over time that looks similar on many scales (a property called self-similarity). Both the self-similar behaviour and the absence of a single characteristic scale of the power-law fractal-like scaling of the incidence of rotavirus infection imply that there is not a universal inherently more virulent serotype to which severe gastroenteritis can uniquely be ascribed. PMID:14561323

  15. Spectral Analysis of Dynamic PET Studies: A Review of 20 Years of Method Developments and Applications.

    PubMed

    Veronese, Mattia; Rizzo, Gaia; Bertoldo, Alessandra; Turkheimer, Federico E

    2016-01-01

    In Positron Emission Tomography (PET), spectral analysis (SA) allows the quantification of dynamic data by relating the radioactivity measured by the scanner in time to the underlying physiological processes of the system under investigation. Among the different approaches for the quantification of PET data, SA is based on the linear solution of the Laplace transform inversion whereas the measured arterial and tissue time-activity curves of a radiotracer are used to calculate the input response function of the tissue. In the recent years SA has been used with a large number of PET tracers in brain and nonbrain applications, demonstrating that it is a very flexible and robust method for PET data analysis. Differently from the most common PET quantification approaches that adopt standard nonlinear estimation of compartmental models or some linear simplifications, SA can be applied without defining any specific model configuration and has demonstrated very good sensitivity to the underlying kinetics. This characteristic makes it useful as an investigative tool especially for the analysis of novel PET tracers. The purpose of this work is to offer an overview of SA, to discuss advantages and limitations of the methodology, and to inform about its applications in the PET field.

  16. Comparison of the electromagnetic responses of C 12 obtained from the Green's function Monte Carlo and spectral function approaches

    DOE PAGES

    Rocco, Noemi; Lovato, Alessandro; Benhar, Omar

    2016-12-23

    Here, the electromagnetic responses of carbon obtained from the Green's function Monte Carlo and spectral function approaches using the same dynamical input are compared in the kinematical region corresponding to momentum transfer in the range 300–570 MeV. The results of our analysis, aimed at pinning down the limits of applicability of the approximations involved in the two schemes, indicate that the factorization ansatz underlying the spectral function formalism provides remarkably accurate results down to momentum transfer as low as 300 MeV. On the other hand, it appears that at 570 MeV relativistic corrections to the electromagnetic current not included inmore » the Monte Carlo calculations may play a significant role in the transverse channel.« less

  17. Comparison of the electromagnetic responses of C 12 obtained from the Green's function Monte Carlo and spectral function approaches

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rocco, Noemi; Lovato, Alessandro; Benhar, Omar

    Here, the electromagnetic responses of carbon obtained from the Green's function Monte Carlo and spectral function approaches using the same dynamical input are compared in the kinematical region corresponding to momentum transfer in the range 300–570 MeV. The results of our analysis, aimed at pinning down the limits of applicability of the approximations involved in the two schemes, indicate that the factorization ansatz underlying the spectral function formalism provides remarkably accurate results down to momentum transfer as low as 300 MeV. On the other hand, it appears that at 570 MeV relativistic corrections to the electromagnetic current not included inmore » the Monte Carlo calculations may play a significant role in the transverse channel.« less

  18. Spectral simulation of unsteady compressible flow past a circular cylinder

    NASA Technical Reports Server (NTRS)

    Don, Wai-Sun; Gottlieb, David

    1990-01-01

    An unsteady compressible viscous wake flow past a circular cylinder was successfully simulated using spectral methods. A new approach in using the Chebyshev collocation method for periodic problems is introduced. It was further proved that the eigenvalues associated with the differentiation matrix are purely imaginary, reflecting the periodicity of the problem. It was been shown that the solution of a model problem has exponential growth in time if improper boundary conditions are used. A characteristic boundary condition, which is based on the characteristics of the Euler equations of gas dynamics, was derived for the spectral code. The primary vortex shedding frequency computed agrees well with the results in the literature for Mach = 0.4, Re = 80. No secondary frequency is observed in the power spectrum analysis of the pressure data.

  19. An Introduction to Computational Physics - 2nd Edition

    NASA Astrophysics Data System (ADS)

    Pang, Tao

    2006-01-01

    Preface to first edition; Preface; Acknowledgements; 1. Introduction; 2. Approximation of a function; 3. Numerical calculus; 4. Ordinary differential equations; 5. Numerical methods for matrices; 6. Spectral analysis; 7. Partial differential equations; 8. Molecular dynamics simulations; 9. Modeling continuous systems; 10. Monte Carlo simulations; 11. Genetic algorithm and programming; 12. Numerical renormalization; References; Index.

  20. Revealing spatio-spectral electroencephalographic dynamics of musical mode and tempo perception by independent component analysis.

    PubMed

    Lin, Yuan-Pin; Duann, Jeng-Ren; Feng, Wenfeng; Chen, Jyh-Horng; Jung, Tzyy-Ping

    2014-02-28

    Music conveys emotion by manipulating musical structures, particularly musical mode- and tempo-impact. The neural correlates of musical mode and tempo perception revealed by electroencephalography (EEG) have not been adequately addressed in the literature. This study used independent component analysis (ICA) to systematically assess spatio-spectral EEG dynamics associated with the changes of musical mode and tempo. Empirical results showed that music with major mode augmented delta-band activity over the right sensorimotor cortex, suppressed theta activity over the superior parietal cortex, and moderately suppressed beta activity over the medial frontal cortex, compared to minor-mode music, whereas fast-tempo music engaged significant alpha suppression over the right sensorimotor cortex. The resultant EEG brain sources were comparable with previous studies obtained by other neuroimaging modalities, such as functional magnetic resonance imaging (fMRI) and positron emission tomography (PET). In conjunction with advanced dry and mobile EEG technology, the EEG results might facilitate the translation from laboratory-oriented research to real-life applications for music therapy, training and entertainment in naturalistic environments.

  1. Time-dependent vibrational spectral analysis of first principles trajectory of methylamine with wavelet transform.

    PubMed

    Biswas, Sohag; Mallik, Bhabani S

    2017-04-12

    The fluctuation dynamics of amine stretching frequencies, hydrogen bonds, dangling N-D bonds, and the orientation profile of the amine group of methylamine (MA) were investigated under ambient conditions by means of dispersion-corrected density functional theory-based first principles molecular dynamics (FPMD) simulations. Along with the dynamical properties, various equilibrium properties such as radial distribution function, spatial distribution function, combined radial and angular distribution functions and hydrogen bonding were also calculated. The instantaneous stretching frequencies of amine groups were obtained by wavelet transform of the trajectory obtained from FPMD simulations. The frequency-structure correlation reveals that the amine stretching frequency is weakly correlated with the nearest nitrogen-deuterium distance. The frequency-frequency correlation function has a short time scale of around 110 fs and a longer time scale of about 1.15 ps. It was found that the short time scale originates from the underdamped motion of intact hydrogen bonds of MA pairs. However, the long time scale of the vibrational spectral diffusion of N-D modes is determined by the overall dynamics of hydrogen bonds as well as the dangling ND groups and the inertial rotation of the amine group of the molecule.

  2. Delay differential analysis of time series.

    PubMed

    Lainscsek, Claudia; Sejnowski, Terrence J

    2015-03-01

    Nonlinear dynamical system analysis based on embedding theory has been used for modeling and prediction, but it also has applications to signal detection and classification of time series. An embedding creates a multidimensional geometrical object from a single time series. Traditionally either delay or derivative embeddings have been used. The delay embedding is composed of delayed versions of the signal, and the derivative embedding is composed of successive derivatives of the signal. The delay embedding has been extended to nonuniform embeddings to take multiple timescales into account. Both embeddings provide information on the underlying dynamical system without having direct access to all the system variables. Delay differential analysis is based on functional embeddings, a combination of the derivative embedding with nonuniform delay embeddings. Small delay differential equation (DDE) models that best represent relevant dynamic features of time series data are selected from a pool of candidate models for detection or classification. We show that the properties of DDEs support spectral analysis in the time domain where nonlinear correlation functions are used to detect frequencies, frequency and phase couplings, and bispectra. These can be efficiently computed with short time windows and are robust to noise. For frequency analysis, this framework is a multivariate extension of discrete Fourier transform (DFT), and for higher-order spectra, it is a linear and multivariate alternative to multidimensional fast Fourier transform of multidimensional correlations. This method can be applied to short or sparse time series and can be extended to cross-trial and cross-channel spectra if multiple short data segments of the same experiment are available. Together, this time-domain toolbox provides higher temporal resolution, increased frequency and phase coupling information, and it allows an easy and straightforward implementation of higher-order spectra across time compared with frequency-based methods such as the DFT and cross-spectral analysis.

  3. Spectrally resolved femtosecond photon echo spectroscopy of astaxanthin

    NASA Astrophysics Data System (ADS)

    Kumar, Ajitesh; Karthick Kumar, S. K.; Gupta, Aditya; Goswami, Debabrata

    2010-12-01

    We have studied the coherence and population dynamics of Astaxanthin solution in methanol and acetonitrile by spectrally resolving their photon echo signals. Our experiments indicate that methanol has a much stronger interaction with the ultrafast dynamics of Astaxanthin in comparison to that of acetonitrile.

  4. Spectrally resolved femtosecond photon echo spectroscopy of astaxanthin

    NASA Astrophysics Data System (ADS)

    Kumar, Ajitesh; Karthick Kumar, S. K.; Gupta, Aditya; Goswami, Debabrata

    2011-08-01

    We have studied the coherence and population dynamics of Astaxanthin solution in methanol and acetonitrile by spectrally resolving their photon echo signals. Our experiments indicate that methanol has a much stronger interaction with the ultrafast dynamics of Astaxanthin in comparison to that of acetonitrile.

  5. Broadband spectrally dynamic solid state illumination source

    NASA Astrophysics Data System (ADS)

    Nicol, David B.; Asghar, Ali; Gupta, Shalini; Kang, Hun; Pan, Ming; Strassburg, Martin; Summers, Chris; Ferguson, Ian T.

    2006-06-01

    Solid state lighting has done well recently in niche markets such as signage and displays, however, no available SSL technologies incorporate all the necessary attributes for general illumination. Development of a novel solid state general illumination source is discussed here. Two LEDs emitting at two distinct wavelengths can be monolithically grown and used to excite two or more phosphors with varied excitation spectra. The combined phosphorescence spectrum can then be controlled by adjusting the relative intensities of the two LED emissions. Preliminary phosphor analysis shows such a scheme to be viable for use in a spectrally dynamic broadband general illumination source. A tunnel junction is envisioned as a means of current spreading in a buried layer for three terminal operation. However, tunnel junction properties in GaN based materials are not well understood, and require further optimization to be practical devices. Preliminary results on GaN tunnel junctions are presented here as well.

  6. Validating clustering of molecular dynamics simulations using polymer models.

    PubMed

    Phillips, Joshua L; Colvin, Michael E; Newsam, Shawn

    2011-11-14

    Molecular dynamics (MD) simulation is a powerful technique for sampling the meta-stable and transitional conformations of proteins and other biomolecules. Computational data clustering has emerged as a useful, automated technique for extracting conformational states from MD simulation data. Despite extensive application, relatively little work has been done to determine if the clustering algorithms are actually extracting useful information. A primary goal of this paper therefore is to provide such an understanding through a detailed analysis of data clustering applied to a series of increasingly complex biopolymer models. We develop a novel series of models using basic polymer theory that have intuitive, clearly-defined dynamics and exhibit the essential properties that we are seeking to identify in MD simulations of real biomolecules. We then apply spectral clustering, an algorithm particularly well-suited for clustering polymer structures, to our models and MD simulations of several intrinsically disordered proteins. Clustering results for the polymer models provide clear evidence that the meta-stable and transitional conformations are detected by the algorithm. The results for the polymer models also help guide the analysis of the disordered protein simulations by comparing and contrasting the statistical properties of the extracted clusters. We have developed a framework for validating the performance and utility of clustering algorithms for studying molecular biopolymer simulations that utilizes several analytic and dynamic polymer models which exhibit well-behaved dynamics including: meta-stable states, transition states, helical structures, and stochastic dynamics. We show that spectral clustering is robust to anomalies introduced by structural alignment and that different structural classes of intrinsically disordered proteins can be reliably discriminated from the clustering results. To our knowledge, our framework is the first to utilize model polymers to rigorously test the utility of clustering algorithms for studying biopolymers.

  7. Validating clustering of molecular dynamics simulations using polymer models

    PubMed Central

    2011-01-01

    Background Molecular dynamics (MD) simulation is a powerful technique for sampling the meta-stable and transitional conformations of proteins and other biomolecules. Computational data clustering has emerged as a useful, automated technique for extracting conformational states from MD simulation data. Despite extensive application, relatively little work has been done to determine if the clustering algorithms are actually extracting useful information. A primary goal of this paper therefore is to provide such an understanding through a detailed analysis of data clustering applied to a series of increasingly complex biopolymer models. Results We develop a novel series of models using basic polymer theory that have intuitive, clearly-defined dynamics and exhibit the essential properties that we are seeking to identify in MD simulations of real biomolecules. We then apply spectral clustering, an algorithm particularly well-suited for clustering polymer structures, to our models and MD simulations of several intrinsically disordered proteins. Clustering results for the polymer models provide clear evidence that the meta-stable and transitional conformations are detected by the algorithm. The results for the polymer models also help guide the analysis of the disordered protein simulations by comparing and contrasting the statistical properties of the extracted clusters. Conclusions We have developed a framework for validating the performance and utility of clustering algorithms for studying molecular biopolymer simulations that utilizes several analytic and dynamic polymer models which exhibit well-behaved dynamics including: meta-stable states, transition states, helical structures, and stochastic dynamics. We show that spectral clustering is robust to anomalies introduced by structural alignment and that different structural classes of intrinsically disordered proteins can be reliably discriminated from the clustering results. To our knowledge, our framework is the first to utilize model polymers to rigorously test the utility of clustering algorithms for studying biopolymers. PMID:22082218

  8. Multivariate frequency domain analysis of protein dynamics

    NASA Astrophysics Data System (ADS)

    Matsunaga, Yasuhiro; Fuchigami, Sotaro; Kidera, Akinori

    2009-03-01

    Multivariate frequency domain analysis (MFDA) is proposed to characterize collective vibrational dynamics of protein obtained by a molecular dynamics (MD) simulation. MFDA performs principal component analysis (PCA) for a bandpass filtered multivariate time series using the multitaper method of spectral estimation. By applying MFDA to MD trajectories of bovine pancreatic trypsin inhibitor, we determined the collective vibrational modes in the frequency domain, which were identified by their vibrational frequencies and eigenvectors. At near zero temperature, the vibrational modes determined by MFDA agreed well with those calculated by normal mode analysis. At 300 K, the vibrational modes exhibited characteristic features that were considerably different from the principal modes of the static distribution given by the standard PCA. The influences of aqueous environments were discussed based on two different sets of vibrational modes, one derived from a MD simulation in water and the other from a simulation in vacuum. Using the varimax rotation, an algorithm of the multivariate statistical analysis, the representative orthogonal set of eigenmodes was determined at each vibrational frequency.

  9. Spectral densities for Frenkel exciton dynamics in molecular crystals: A TD-DFTB approach

    NASA Astrophysics Data System (ADS)

    Plötz, Per-Arno; Megow, Jörg; Niehaus, Thomas; Kühn, Oliver

    2017-02-01

    Effects of thermal fluctuations on the electronic excitation energies and intermonomeric Coulomb couplings are investigated for a perylene-tetracarboxylic-diimide crystal. To this end, time dependent density functional theory based tight binding (TD-DFTB) in the linear response formulation is used in combination with electronic ground state classical molecular dynamics. As a result, a parametrized Frenkel exciton Hamiltonian is obtained, with the effect of exciton-vibrational coupling being described by spectral densities. Employing dynamically defined normal modes, these spectral densities are analyzed in great detail, thus providing insight into the effect of specific intramolecular motions on excitation energies and Coulomb couplings. This distinguishes the present method from approaches using fixed transition densities. The efficiency by which intramolecular contributions to the spectral density can be calculated is a clear advantage of this method as compared with standard TD-DFT.

  10. Singular spectrum analysis in nonlinear dynamics, with applications to paleoclimatic time series

    NASA Technical Reports Server (NTRS)

    Vautard, R.; Ghil, M.

    1989-01-01

    Two dimensions of a dynamical system given by experimental time series are distinguished. Statistical dimension gives a theoretical upper bound for the minimal number of degrees of freedom required to describe the attractor up to the accuracy of the data, taking into account sampling and noise problems. The dynamical dimension is the intrinsic dimension of the attractor and does not depend on the quality of the data. Singular Spectrum Analysis (SSA) provides estimates of the statistical dimension. SSA also describes the main physical phenomena reflected by the data. It gives adaptive spectral filters associated with the dominant oscillations of the system and clarifies the noise characteristics of the data. SSA is applied to four paleoclimatic records. The principal climatic oscillations and the regime changes in their amplitude are detected. About 10 degrees of freedom are statistically significant in the data. Large noise and insufficient sample length do not allow reliable estimates of the dynamical dimension.

  11. Phoebe: A Surface Dominated by Water

    NASA Astrophysics Data System (ADS)

    Fraser, Wesley C.; Brown, Michael E.

    2018-07-01

    The Saturnian irregular satellite, Phoebe, can be broadly described as a water-rich rock. This object, which presumably originated from the same primordial population shared by the dynamically excited Kuiper Belt Objects (KBOs), has received high-resolution spectral imaging during the Cassini flyby. We present a new analysis of the Visual Infrared Mapping Spectrometer observations of Phoebe, which critically, includes a geometry correction routine that enables pixel-by-pixel mapping of visible and infrared spectral cubes directly onto the Phoebe shape model, even when an image exhibits significant trailing errors. The result of our re-analysis is a successful match of 46 images, producing spectral maps covering the majority of Phoebe’s surface, roughly a third of which is imaged by high-resolution observations (<22 km per pixel resolution). There is no spot on Phoebe’s surface that is absent of water absorption. The regions richest in water are clearly associated with the Jason and south pole impact basins. Phoebe exhibits only three spectral types, and a water–ice concentration that correlates with physical depth and visible albedo. The water-rich and water-poor regions exhibit significantly different crater size frequency distributions and different large crater morphologies. We propose that Phoebe once had a water-poor surface whose water–ice concentration was enhanced by basin-forming impacts that exposed richer subsurface layers. The range of Phoebe’s water–ice absorption spans the same range exhibited by dynamically excited KBOs. The common water–ice absorption depths and primordial origins, and the association of Phoebe’s water-rich regions with its impact basins, suggests the plausible idea that KBOs also originated with water-poor surfaces that were enhanced through stochastic collisional modification.

  12. Studies of dynamic processes in biomedicine by high-speed spectral optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Wojtkowski, M.; Kowalczyk, A.

    2007-02-01

    This contribution demonstrates potential of Spectral Optical Coherence Tomography (SOCT) for studies of dynamic processes in biomedicine occurring at various time scales. Several examples from ophthalmology, optometry, surgery, neurology are given to illustrate the extension of SOCT beyond pure morphological investigations.

  13. Individual Sensitivity to Spectral and Temporal Cues in Listeners with Hearing Impairment

    ERIC Educational Resources Information Center

    Souza, Pamela E.; Wright, Richard A.; Blackburn, Michael C.; Tatman, Rachael; Gallun, Frederick J.

    2015-01-01

    Purpose: The present study was designed to evaluate use of spectral and temporal cues under conditions in which both types of cues were available. Method: Participants included adults with normal hearing and hearing loss. We focused on 3 categories of speech cues: static spectral (spectral shape), dynamic spectral (formant change), and temporal…

  14. The problem of the periodicity of the epidemic process. [solar activity effects on diphtheria outbreak

    NASA Technical Reports Server (NTRS)

    Yagodinskiy, V. N.; Konovalenko, Z. P.; Druzhinin, I. P.

    1974-01-01

    An analysis of data from epidemics makes it possible to determine their principal causes, governed by environmental factors (solar activity, etc.) The results of an analysis of the periodicity of the epidemic process in the case of diphtheria are presented which was conducted with the aid of autocorrelation and spectral methods of analysis. Numerical data (annual figures) are used on the dynamics of diphtheria in 50 regions (points) with a total duration of 2,777 years.

  15. Monitoring Fatigue Status with HRV Measures in Elite Athletes: An Avenue Beyond RMSSD?

    PubMed

    Schmitt, Laurent; Regnard, Jacques; Millet, Grégoire P

    2015-01-01

    Among the tools proposed to assess the athlete's "fatigue," the analysis of heart rate variability (HRV) provides an indirect evaluation of the settings of autonomic control of heart activity. HRV analysis is performed through assessment of time-domain indices, the square root of the mean of the sum of the squares of differences between adjacent normal R-R intervals (RMSSD) measured during short (5 min) recordings in supine position upon awakening in the morning and particularly the logarithm of RMSSD (LnRMSSD) has been proposed as the most useful resting HRV indicator. However, if RMSSD can help the practitioner to identify a global "fatigue" level, it does not allow discriminating different types of fatigue. Recent results using spectral HRV analysis highlighted firstly that HRV profiles assessed in supine and standing positions are independent and complementary; and secondly that using these postural profiles allows the clustering of distinct sub-categories of "fatigue." Since, cardiovascular control settings are different in standing and lying posture, using the HRV figures of both postures to cluster fatigue state embeds information on the dynamics of control responses. Such, HRV spectral analysis appears more sensitive and enlightening than time-domain HRV indices. The wealthier information provided by this spectral analysis should improve the monitoring of the adaptive training-recovery process in athletes.

  16. A search for two types of transverse excitations in liquid polyvalent metals at ambient pressure: An ab initio molecular dynamics study of collective excitations in liquid Al, Tl and Ni

    NASA Astrophysics Data System (ADS)

    Bryk, Taras; Demchuk, Taras; Jakse, Noël; Wax, Jean-François

    2018-02-01

    Recent findings of pressure-induced emergence of unusual high-frequency contribution to transverse current spectral functions in several simple liquid metals at high pressures raised a question whether similar features can be observed in liquid metals at ambient conditions. We report here analysis of ab initio molecular dynamics-derived longitudinal (L) and transverse (T) current spectral functions and corresponding dispersions of collective excitations in liquid polyvalent metals Al, Tl, Ni. We have not found evidences of the second branch of high-frequency transverse modes in liquid Al and Ni, while in the case of liquid Tl they were clearly present in transverse dynamics. The vibrational density of states for liquid Tl has a pronounced high-frequency shoulder, which is located right in the frequency range of the second high-frequency transverse branch, while for liquid Al and Ni the vibrational density of states has only a weak indication of possible high-frequency shoulder. The origin of specific behavior of transverse excitations in liquid Tl is discussed.

  17. Fluorescence from Multiple Chromophore Hydrogen-Bonding States in the Far-Red Protein TagRFP675.

    PubMed

    Konold, Patrick E; Yoon, Eunjin; Lee, Junghwa; Allen, Samantha L; Chapagain, Prem P; Gerstman, Bernard S; Regmi, Chola K; Piatkevich, Kiryl D; Verkhusha, Vladislav V; Joo, Taiha; Jimenez, Ralph

    2016-08-04

    Far-red fluorescent proteins are critical for in vivo imaging applications, but the relative importance of structure versus dynamics in generating large Stokes-shifted emission is unclear. The unusually red-shifted emission of TagRFP675, a derivative of mKate, has been attributed to the multiple hydrogen bonds with the chromophore N-acylimine carbonyl. We characterized TagRFP675 and point mutants designed to perturb these hydrogen bonds with spectrally resolved transient grating and time-resolved fluorescence (TRF) spectroscopies supported by molecular dynamics simulations. TRF results for TagRFP675 and the mKate/M41Q variant show picosecond time scale red-shifts followed by nanosecond time blue-shifts. Global analysis of the TRF spectra reveals spectrally distinct emitting states that do not interconvert during the S1 lifetime. These dynamics originate from photoexcitation of a mixed ground-state population of acylimine hydrogen bond conformers. Strategically tuning the chromophore environment in TagRFP675 might stabilize the most red-shifted conformation and result in a variant with a larger Stokes shift.

  18. Electroencephalographic dynamics of musical emotion perception revealed by independent spectral components.

    PubMed

    Lin, Yuan-Pin; Duann, Jeng-Ren; Chen, Jyh-Horng; Jung, Tzyy-Ping

    2010-04-21

    This study explores the electroencephalographic (EEG) correlates of emotional experience during music listening. Independent component analysis and analysis of variance were used to separate statistically independent spectral changes of the EEG in response to music-induced emotional processes. An independent brain process with equivalent dipole located in the fronto-central region exhibited distinct δ-band and θ-band power changes associated with self-reported emotional states. Specifically, the emotional valence was associated with δ-power decreases and θ-power increases in the frontal-central area, whereas the emotional arousal was accompanied by increases in both δ and θ powers. The resultant emotion-related component activations that were less interfered by the activities from other brain processes complement previous EEG studies of emotion perception to music.

  19. Spectral interferometry for morphological imaging in in vitro fertilization (IVF) (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Zhu, Yizheng; Li, Chengshuai

    2016-03-01

    Morphological assessment of spermatozoa is of critical importance for in vitro fertilization (IVF), especially intracytoplasmic sperm injection (ICSI)-based IVF. In ICSI, a single sperm cell is selected and injected into an egg to achieve fertilization. The quality of the sperm cell is found to be highly correlated to IVF success. Sperm morphology, such as shape, head birefringence and motility, among others, are typically evaluated under a microscope. Current observation relies on conventional techniques such as differential interference contrast microscopy and polarized light microscopy. Their qualitative nature, however, limits the ability to provide accurate quantitative analysis. Here, we demonstrate quantitative morphological measurement of sperm cells using two types of spectral interferometric techniques, namely spectral modulation interferometry and spectral multiplexing interferometry. Both are based on spectral-domain low coherence interferometry, which is known for its exquisite phase determination ability. While spectral modulation interferometry encodes sample phase in a single spectrum, spectral multiplexing interferometry does so for sample birefringence. Therefore they are capable of highly sensitive phase and birefringence imaging. These features suit well in the imaging of live sperm cells, which are small, dynamic objects with only low to moderate levels of phase and birefringence contrast. We will introduce the operation of both techniques and demonstrate their application to measuring the phase and birefringence morphology of sperm cells.

  20. Relationship between Auditory and Cognitive Abilities in Older Adults

    PubMed Central

    Sheft, Stanley

    2015-01-01

    Objective The objective was to evaluate the association of peripheral and central hearing abilities with cognitive function in older adults. Methods Recruited from epidemiological studies of aging and cognition at the Rush Alzheimer’s Disease Center, participants were a community-dwelling cohort of older adults (range 63–98 years) without diagnosis of dementia. The cohort contained roughly equal numbers of Black (n=61) and White (n=63) subjects with groups similar in terms of age, gender, and years of education. Auditory abilities were measured with pure-tone audiometry, speech-in-noise perception, and discrimination thresholds for both static and dynamic spectral patterns. Cognitive performance was evaluated with a 12-test battery assessing episodic, semantic, and working memory, perceptual speed, and visuospatial abilities. Results Among the auditory measures, only the static and dynamic spectral-pattern discrimination thresholds were associated with cognitive performance in a regression model that included the demographic covariates race, age, gender, and years of education. Subsequent analysis indicated substantial shared variance among the covariates race and both measures of spectral-pattern discrimination in accounting for cognitive performance. Among cognitive measures, working memory and visuospatial abilities showed the strongest interrelationship to spectral-pattern discrimination performance. Conclusions For a cohort of older adults without diagnosis of dementia, neither hearing thresholds nor speech-in-noise ability showed significant association with a summary measure of global cognition. In contrast, the two auditory metrics of spectral-pattern discrimination ability significantly contributed to a regression model prediction of cognitive performance, demonstrating association of central auditory ability to cognitive status using auditory metrics that avoided the confounding effect of speech materials. PMID:26237423

  1. Simulating PACE Global Ocean Radiances

    NASA Technical Reports Server (NTRS)

    Gregg, Watson W.; Rousseaux, Cecile S.

    2017-01-01

    The NASA PACE mission is a hyper-spectral radiometer planned for launch in the next decade. It is intended to provide new information on ocean biogeochemical constituents by parsing the details of high resolution spectral absorption and scattering. It is the first of its kind for global applications and as such, poses challenges for design and operation. To support pre-launch mission development and assess on-orbit capabilities, the NASA Global Modeling and Assimilation Office has developed a dynamic simulation of global water-leaving radiances, using an ocean model containing multiple ocean phytoplankton groups, particulate detritus, particulate inorganic carbon (PIC), and chromophoric dissolved organic carbon (CDOC) along with optical absorption and scattering processes at 1 nm spectral resolution. The purpose here is to assess the skill of the dynamic model and derived global radiances. Global bias, uncertainty, and correlation are derived using available modern satellite radiances at moderate spectral resolution. Total chlorophyll, PIC, and the absorption coefficient of CDOC (aCDOC), are simultaneously assimilated to improve the fidelity of the optical constituent fields. A 5-year simulation showed statistically significant (P < 0.05) comparisons of chlorophyll (r = 0.869), PIC (r = 0.868), and a CDOC (r =0.890) with satellite data. Additionally, diatoms (r = 0.890), cyanobacteria (r = 0.732), and coccolithophores (r = 0.716) were significantly correlated with in situ data. Global assimilated distributions of optical constituents were coupled with a radiative transfer model (Ocean-Atmosphere Spectral Irradiance Model, OASIM) to estimate normalized water-leaving radiances at 1 nm for the spectral range 250-800 nm. These unassimilated radiances were within 0.074 mW/sq cm/micron/sr of MODIS-Aqua radiances at 412, 443, 488, 531, 547, and 667 nm. This difference represented a bias of 10.4% (model low). A mean correlation of 0.706 (P < 0.05) was found with global distributions of MODIS radiances. These results suggest skill in the global assimilated model and resulting radiances. The reported error characterization suggests that the global dynamical simulation can support some aspects of mission design and analysis. For example, the high spectral resolution of the simulation supports investigations of band selection. The global nature of the radiance representations supports investigations of satellite observing scenarios. Global radiances at bands not available in current and past missions support investigations of mission capability. PACE, ocean color, water-leaving radiances, biogeochemical model, radiative transfer model

  2. Simulating PACE Global Ocean Radiances

    PubMed Central

    Gregg, Watson W.; Rousseaux, Cécile S.

    2017-01-01

    The NASA PACE mission is a hyper-spectral radiometer planned for launch in the next decade. It is intended to provide new information on ocean biogeochemical constituents by parsing the details of high resolution spectral absorption and scattering. It is the first of its kind for global applications and as such, poses challenges for design and operation. To support pre-launch mission development and assess on-orbit capabilities, the NASA Global Modeling and Assimilation Office has developed a dynamic simulation of global water-leaving radiances, using an ocean model containing multiple ocean phytoplankton groups, particulate detritus, particulate inorganic carbon (PIC), and chromophoric dissolved organic carbon (CDOC) along with optical absorption and scattering processes at 1 nm spectral resolution. The purpose here is to assess the skill of the dynamic model and derived global radiances. Global bias, uncertainty, and correlation are derived using available modern satellite radiances at moderate spectral resolution. Total chlorophyll, PIC, and the absorption coefficient of CDOC (aCDOC), are simultaneously assimilated to improve the fidelity of the optical constituent fields. A 5-year simulation showed statistically significant (P <0.05) comparisons of chlorophyll (r = 0.869), PIC (r = 0.868), and aCDOC (r = 0.890) with satellite data. Additionally, diatoms (r = 0.890), cyanobacteria (r = 0.732), and coccolithophores (r = 0.716) were significantly correlated with in situ data. Global assimilated distributions of optical constituents were coupled with a radiative transfer model (Ocean-Atmosphere Spectral Irradiance Model, OASIM) to estimate normalized water-leaving radiances at 1 nm for the spectral range 250–800 nm. These unassimilated radiances were within −0.074 mW cm−2 μm1 sr−1 of MODIS-Aqua radiances at 412, 443, 488, 531, 547, and 667 nm. This difference represented a bias of −10.4% (model low). A mean correlation of 0.706 (P < 0.05) was found with global distributions of MODIS radiances. These results suggest skill in the global assimilated model and resulting radiances. The reported error characterization suggests that the global dynamical simulation can support some aspects of mission design and analysis. For example, the high spectral resolution of the simulation supports investigations of band selection. The global nature of the radiance representations supports investigations of satellite observing scenarios. Global radiances at bands not available in current and past missions support investigations of mission capability. PMID:29292403

  3. Onset of normal and inverse homoclinic bifurcation in a double plasma system near a plasma fireball

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitra, Vramori; Sarma, Bornali; Sarma, Arun

    Plasma fireballs are generated due to a localized discharge and appear as a luminous glow with a sharp boundary, which suggests the presence of a localized electric field such as electrical sheath or double layer structure. The present work reports the observation of normal and inverse homoclinic bifurcation phenomena in plasma oscillations that are excited in the presence of fireball in a double plasma device. The controlling parameters for these observations are the ratio of target to source chamber (n{sub T}/n{sub S}) densities and applied electrode voltage. Homoclinic bifurcation is noticed in the plasma potential fluctuations as the system evolvesmore » from narrow to long time period oscillations and vice versa with the change of control parameter. The dynamical transition in plasma fireball is demonstrated by spectral analysis, recurrence quantification analysis (RQA), and statistical measures, viz., skewness and kurtosis. The increasing trend of normalized variance reflects that enhancing n{sub T}/n{sub S} induces irregularity in plasma dynamics. The exponential growth of the time period is strongly indicative of homoclinic bifurcation in the system. The gradual decrease of skewness and increase of kurtosis with the increase of n{sub T}/n{sub S} also reflect growing complexity in the system. The visual change of recurrence plot and gradual enhancement of RQA variables DET, L{sub max}, and ENT reflects the bifurcation behavior in the dynamics. The combination of RQA and spectral analysis is a clear evidence that homoclinic bifurcation occurs due to the presence of plasma fireball with different density ratios. However, inverse bifurcation takes place due to the change of fireball voltage. Some of the features observed in the experiment are consistent with a model that describes the dynamics of ionization instabilities.« less

  4. Proper orthogonal decomposition-based spectral higher-order stochastic estimation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Baars, Woutijn J., E-mail: wbaars@unimelb.edu.au; Tinney, Charles E.

    A unique routine, capable of identifying both linear and higher-order coherence in multiple-input/output systems, is presented. The technique combines two well-established methods: Proper Orthogonal Decomposition (POD) and Higher-Order Spectra Analysis. The latter of these is based on known methods for characterizing nonlinear systems by way of Volterra series. In that, both linear and higher-order kernels are formed to quantify the spectral (nonlinear) transfer of energy between the system's input and output. This reduces essentially to spectral Linear Stochastic Estimation when only first-order terms are considered, and is therefore presented in the context of stochastic estimation as spectral Higher-Order Stochastic Estimationmore » (HOSE). The trade-off to seeking higher-order transfer kernels is that the increased complexity restricts the analysis to single-input/output systems. Low-dimensional (POD-based) analysis techniques are inserted to alleviate this void as POD coefficients represent the dynamics of the spatial structures (modes) of a multi-degree-of-freedom system. The mathematical framework behind this POD-based HOSE method is first described. The method is then tested in the context of jet aeroacoustics by modeling acoustically efficient large-scale instabilities as combinations of wave packets. The growth, saturation, and decay of these spatially convecting wave packets are shown to couple both linearly and nonlinearly in the near-field to produce waveforms that propagate acoustically to the far-field for different frequency combinations.« less

  5. Characterization of KCNE1 inside Lipodisq Nanoparticles for EPR Spectroscopic Studies of Membrane Proteins.

    PubMed

    Sahu, Indra D; Zhang, Rongfu; Dunagan, Megan M; Craig, Andrew F; Lorigan, Gary A

    2017-06-01

    EPR spectroscopic studies of membrane proteins in a physiologically relevant native membrane-bound state are extremely challenging due to the complexity observed in inhomogeneity sample preparation and dynamic motion of the spin-label. Traditionally, detergent micelles are the most widely used membrane mimetics for membrane proteins due to their smaller size and homogeneity, providing high-resolution structure analysis by solution NMR spectroscopy. However, it is often difficult to examine whether the protein structure in a micelle environment is the same as that of the respective membrane-bound state. Recently, lipodisq nanoparticles have been introduced as a potentially good membrane mimetic system for structural studies of membrane proteins. However, a detailed characterization of a spin-labeled membrane protein incorporated into lipodisq nanoparticles is still lacking. In this work, lipodisq nanoparticles were used as a membrane mimic system for probing the structural and dynamic properties of the integral membrane protein KCNE1 using site-directed spin labeling EPR spectroscopy. The characterization of spin-labeled KCNE1 incorporated into lipodisq nanoparticles was carried out using CW-EPR titration experiments for the EPR spectral line shape analysis and pulsed EPR titration experiment for the phase memory time (T m ) measurements. The CW-EPR titration experiment indicated an increase in spectral line broadening with the addition of the SMA polymer which approaches close to the rigid limit at a lipid to polymer weight ratio of 1:1, providing a clear solubilization of the protein-lipid complex. Similarly, the T m titration experiment indicated an increase in T m values with the addition of SMA polymer and approaches ∼2 μs at a lipid to polymer weight ratio of 1:2. Additionally, CW-EPR spectral line shape analysis was performed on six inside and six outside the membrane spin-label probes of KCNE1 in lipodisq nanoparticles. The results indicated significant differences in EPR spectral line broadening and a corresponding inverse central line width between spin-labeled KCNE1 residues located inside and outside of the membrane for lipodisq nanoparticle samples when compared to lipid vesicle samples. These results are consistent with the solution NMR structure of KCNE1. This study will be beneficial for researchers working on studying the structural and dynamic properties of membrane proteins.

  6. Green's Functions from Real-Time Bold-Line Monte Carlo Calculations: Spectral Properties of the Nonequilibrium Anderson Impurity Model

    NASA Astrophysics Data System (ADS)

    Cohen, Guy; Gull, Emanuel; Reichman, David R.; Millis, Andrew J.

    2014-04-01

    The nonequilibrium spectral properties of the Anderson impurity model with a chemical potential bias are investigated within a numerically exact real-time quantum Monte Carlo formalism. The two-time correlation function is computed in a form suitable for nonequilibrium dynamical mean field calculations. Additionally, the evolution of the model's spectral properties are simulated in an alternative representation, defined by a hypothetical but experimentally realizable weakly coupled auxiliary lead. The voltage splitting of the Kondo peak is confirmed and the dynamics of its formation after a coupling or gate quench are studied. This representation is shown to contain additional information about the dot's population dynamics. Further, we show that the voltage-dependent differential conductance gives a reasonable qualitative estimate of the equilibrium spectral function, but significant qualitative differences are found including incorrect trends and spurious temperature dependent effects.

  7. Wavelet Filter Banks for Super-Resolution SAR Imaging

    NASA Technical Reports Server (NTRS)

    Sheybani, Ehsan O.; Deshpande, Manohar; Memarsadeghi, Nargess

    2011-01-01

    This paper discusses Innovative wavelet-based filter banks designed to enhance the analysis of super resolution Synthetic Aperture Radar (SAR) images using parametric spectral methods and signal classification algorithms, SAR finds applications In many of NASA's earth science fields such as deformation, ecosystem structure, and dynamics of Ice, snow and cold land processes, and surface water and ocean topography. Traditionally, standard methods such as Fast-Fourier Transform (FFT) and Inverse Fast-Fourier Transform (IFFT) have been used to extract Images from SAR radar data, Due to non-parametric features of these methods and their resolution limitations and observation time dependence, use of spectral estimation and signal pre- and post-processing techniques based on wavelets to process SAR radar data has been proposed. Multi-resolution wavelet transforms and advanced spectral estimation techniques have proven to offer efficient solutions to this problem.

  8. Rigorous Model Reduction for a Damped-Forced Nonlinear Beam Model: An Infinite-Dimensional Analysis

    NASA Astrophysics Data System (ADS)

    Kogelbauer, Florian; Haller, George

    2018-06-01

    We use invariant manifold results on Banach spaces to conclude the existence of spectral submanifolds (SSMs) in a class of nonlinear, externally forced beam oscillations. SSMs are the smoothest nonlinear extensions of spectral subspaces of the linearized beam equation. Reduction in the governing PDE to SSMs provides an explicit low-dimensional model which captures the correct asymptotics of the full, infinite-dimensional dynamics. Our approach is general enough to admit extensions to other types of continuum vibrations. The model-reduction procedure we employ also gives guidelines for a mathematically self-consistent modeling of damping in PDEs describing structural vibrations.

  9. Analysis of migrating diurnal tides detected in FORMOSAT-3/COSMIC temperature data

    NASA Astrophysics Data System (ADS)

    Pirscher, B.; Foelsche, U.; Borsche, M.; Kirchengast, G.; Kuo, Y.-H.

    2010-07-01

    The characteristics of atmospheric tides in the upper troposphere and lower stratosphere region are investigated using radio occultation (RO) measurements performed by the Formosa Satellite Mission-3/Constellation Observing System for Meteorology, Ionosphere, and Climate (FORMOSAT-3/COSMIC) satellite constellation and compared to tides observed in short-term forecast model fields of European Centre for Medium-Range Weather Forecasts (ECMWF) and National Centers for Environmental Prediction (NCEP). Spectral analysis of 2 years of monthly data (2007 to 2008) yields the migrating diurnal tide to be the largest spectral component. This diurnal tide shows similar temporal, latitudinal, and altitudinal characteristics in all data sets equatorward of 50°. Beyond 50°, COSMIC local time sampling is insufficient within 1 month, which prevents space-time spectral analysis from isolating atmospheric waves. Diurnal tides of temperature are characterized by largest amplitudes in the tropics (0.8 K to 1.0 K at an altitude of 30 km). Amplitudes of diurnal tides analyzed in model data are more pronounced by ˜20%. An annual cycle of the amplitudes, characteristically linked to the movement of the intertropical convergence zone, is clearly revealed. Tropical diurnal phase features downward progression of waves fronts with a vertical wavelength of 20 km. Extratropical diurnal tides are most pronounced in the model data sets with amplitudes of up to 0.5 K at 30 km. In this analysis we also see the influence of high-altitude initialization of RO data by background information in using data processed by two different centers (University Corporation for Atmospheric Research (UCAR) and Wegener Center (WEGC)). UCAR data, initialized by a climatology without tidal information, exhibit no appreciable extratropical diurnal tides, while WEGC data, initialized by ECMWF forecasts, show more pronounced ones. Overall the results underpin the utility of the local-time resolving COSMIC RO constellation data for monitoring diurnal tide dynamics in the stratosphere. The agreement between observational and model data further confirms that the tidal dynamics is appropriately captured in the models, which is important for other (middle/upper) atmosphere models relying on ECMWF or NCEP dynamics.

  10. Linear modeling of steady-state behavioral dynamics.

    PubMed Central

    Palya, William L; Walter, Donald; Kessel, Robert; Lucke, Robert

    2002-01-01

    The observed steady-state behavioral dynamics supported by unsignaled periods of reinforcement within repeating 2,000-s trials were modeled with a linear transfer function. These experiments employed improved schedule forms and analytical methods to improve the precision of the measured transfer function, compared to previous work. The refinements include both the use of multiple reinforcement periods that improve spectral coverage and averaging of independently determined transfer functions. A linear analysis was then used to predict behavior observed for three different test schedules. The fidelity of these predictions was determined. PMID:11831782

  11. Dynamics of polymer nanoparticles and chains.

    NASA Astrophysics Data System (ADS)

    Streletzky, Kiril; McKenna, John; Hillier, Gerry

    2006-10-01

    We present a Dynamic Light Scattering study of transport properties of the polymer chains and nanoparticles made out of the same starting solution. The spectra of both systems are highly non-exponential requiring a spectral time moment analysis. Our findings indicate the existence of several modes of relaxation in both systems. The comparison of the mean relaxation rates and diffusion coefficients of the different modes in two systems under good solvent conditions will be reported. Temperature sensitivity of the polymer nanoparticles and its possible applications in pharmaceutical, coatings, and petroleum industries will also be discussed.

  12. Time-varying analysis of electrodermal activity during exercise

    PubMed Central

    Reljin, Natasa; Mills, Craig; Mills, Ian; Florian, John P.; VanHeest, Jaci L.; Chon, Ki H.

    2018-01-01

    The electrodermal activity (EDA) is a useful tool for assessing skin sympathetic nervous activity. Using spectral analysis of EDA data at rest, we have previously found that the spectral band which is the most sensitive to central sympathetic control is largely confined to 0.045 to 0.25 Hz. However, the frequency band associated with sympathetic control in EDA has not been studied for exercise conditions. Establishing the band limits more precisely is important to ensure the accuracy and sensitivity of the technique. As exercise intensity increases, it is intuitive that the frequencies associated with the autonomic dynamics should also increase accordingly. Hence, the aim of this study was to examine the appropriate frequency band associated with the sympathetic nervous system in the EDA signal during exercise. Eighteen healthy subjects underwent a sub-maximal exercise test, including a resting period, walking, and running, until achieving 85% of maximum heart rate. Both EDA and ECG data were measured simultaneously for all subjects. The ECG was used to monitor subjects’ instantaneous heart rate, which was used to set the experiment’s end point. We found that the upper bound of the frequency band (Fmax) containing the EDA spectral power significantly shifted to higher frequencies when subjects underwent prolonged low-intensity (Fmax ~ 0.28) and vigorous-intensity exercise (Fmax ~ 0.37 Hz) when compared to the resting condition. In summary, we have found shifting of the sympathetic dynamics to higher frequencies in the EDA signal when subjects undergo physical activity. PMID:29856815

  13. Q-3D: Imaging Spectroscopy of Quasar Hosts with JWST Analyzed with a Powerful New PSF Decomposition and Spectral Analysis Package

    NASA Astrophysics Data System (ADS)

    Wylezalek, Dominika; Veilleux, Sylvain; Zakamska, Nadia; Barrera-Ballesteros, J.; Luetzgendorf, N.; Nesvadba, N.; Rupke, D.; Sun, A.

    2017-11-01

    In the last few years, optical and near-IR IFU observations from the ground have revolutionized extragalactic astronomy. The unprecedented infrared sensitivity, spatial resolution, and spectral coverage of the JWST IFUs will ensure high demand from the community. For a wide range of extragalactic phenomena (e.g. quasars, starbursts, supernovae, gamma ray bursts, tidal disruption events) and beyond (e.g. nebulae, debris disks around bright stars), PSF contamination will be an issue when studying the underlying extended emission. We propose to provide the community with a PSF decomposition and spectral analysis package for high dynamic range JWST IFU observations allowing the user to create science-ready maps of relevant spectral features. Luminous quasars, with their bright central source (quasar) and extended emission (host galaxy), are excellent test cases for this software. Quasars are also of high scientific interest in their own right as they are widely considered to be the main driver in regulating massive galaxy growth. JWST will revolutionize our understanding of black hole-galaxy co-evolution by allowing us to probe the stellar, gas, and dust components of nearby and distant galaxies, spatially and spectrally. We propose to use the IFU capabilities of NIRSpec and MIRI to study the impact of three carefully selected luminous quasars on their hosts. Our program will provide (1) a scientific dataset of broad interest that will serve as a pathfinder for JWST science investigations in IFU mode and (2) a powerful new data analysis tool that will enable frontier science for a wide swath of astrophysical research.

  14. Existence of a new emitting singlet state of proflavine: femtosecond dynamics of the excited state processes and quantum chemical studies in different solvents.

    PubMed

    Kumar, Karuppannan Senthil; Selvaraju, Chellappan; Malar, Ezekiel Joy Padma; Natarajan, Paramasivam

    2012-01-12

    Proflavine (3,6-diaminoacridine) shows fluorescence emission with lifetime, 4.6 ± 0.2 ns, in all the solvents irrespective of the solvent polarity. To understand this unusual photophysical property, investigations were carried out using steady state and time-resolved fluorescence spectroscopy in the pico- and femtosecond time domain. Molecular geometries in the ground and low-lying excited states of proflavine were examined by complete structural optimization using ab initio quantum chemical computations at HF/6-311++G** and CIS/6-311++G** levels. Time dependent density functional theory (TDDFT) calculations were performed to study the excitation energies in the low-lying excited states. The steady state absorption and emission spectral details of proflavine are found to be influenced by solvents. The femtosecond fluorescence decay of the proflavine in all the solvents follows triexponential function with two ultrafast decay components (τ(1) and τ(2)) in addition to the nanosecond component. The ultrafast decay component, τ(1), is attributed to the solvation dynamics of the particular solvent used. The second ultrafast decay component, τ(2), is found to vary from 50 to 215 ps depending upon the solvent. The amplitudes of the ultrafast decay components vary with the wavelength and show time dependent spectral shift in the emission maximum. The observation is interpreted that the time dependent spectral shift is not only due to solvation dynamics but also due to the existence of more than one emitting state of proflavine in the solvent used. Time resolved area normalized emission spectral (TRANES) analysis shows an isoemissive point, indicating the presence of two emitting states in homogeneous solution. Detailed femtosecond fluorescence decay analysis allows us to isolate the two independent emitting components of the close lying singlet states. The CIS and TDDFT calculations also support the existence of the close lying emitting states. The near constant lifetime observed for proflavine in different solvents is suggested to be due to the similar dipole moments of the ground and the evolved emitting singlet state of the dye from the Franck-Condon excited state.

  15. The Impact of Varying the Physics Grid Resolution Relative to the Dynamical Core Resolution in CAM-SE-CSLAM

    NASA Astrophysics Data System (ADS)

    Herrington, A. R.; Lauritzen, P. H.; Reed, K. A.

    2017-12-01

    The spectral element dynamical core of the Community Atmosphere Model (CAM) has recently been coupled to an approximately isotropic, finite-volume grid per implementation of the conservative semi-Lagrangian multi-tracer transport scheme (CAM-SE-CSLAM; Lauritzen et al. 2017). In this framework, the semi-Lagrangian transport of tracers are computed on the finite-volume grid, while the adiabatic dynamics are solved using the spectral element grid. The physical parameterizations are evaluated on the finite-volume grid, as opposed to the unevenly spaced Gauss-Lobatto-Legendre nodes of the spectral element grid. Computing the physics on the finite-volume grid reduces numerical artifacts such as grid imprinting, possibly because the forcing terms are no longer computed at element boundaries where the resolved dynamics are least smooth. The separation of the physics grid and the dynamics grid allows for a unique opportunity to understand the resolution sensitivity in CAM-SE-CSLAM. The observed large sensitivity of CAM to horizontal resolution is a poorly understood impediment to improved simulations of regional climate using global, variable resolution grids. Here, a series of idealized moist simulations are presented in which the finite-volume grid resolution is varied relative to the spectral element grid resolution in CAM-SE-CSLAM. The simulations are carried out at multiple spectral element grid resolutions, in part to provide a companion set of simulations, in which the spectral element grid resolution is varied relative to the finite-volume grid resolution, but more generally to understand if the sensitivity to the finite-volume grid resolution is consistent across a wider spectrum of resolved scales. Results are interpreted in the context of prior ideas regarding resolution sensitivity of global atmospheric models.

  16. High spatial resolution three-dimensional mapping of vegetation spectral dynamics using computer vision

    Treesearch

    Jonathan P. Dandois; Erle C. Ellis

    2013-01-01

    High spatial resolution three-dimensional (3D) measurements of vegetation by remote sensing are advancing ecological research and environmental management. However, substantial economic and logistical costs limit this application, especially for observing phenological dynamics in ecosystem structure and spectral traits. Here we demonstrate a new aerial remote sensing...

  17. Analysis of cardiovascular regulation.

    PubMed

    Wilhelm, F H; Grossman, P; Roth, W T

    1999-01-01

    Adequate characterization of hemodynamic and autonomic responses to physical and mental stress can elucidate underlying mechanisms of cardiovascular disease or anxiety disorders. We developed a physiological signal processing system for analysis of continuously recorded ECG, arterial blood pressure (BP), and respiratory signals using the programming language Matlab. Data collection devices are a 16-channel digital, physiological recorder (Vitaport), a finger arterial pressure transducer (Finapres), and a respiratory inductance plethysmograph (Respitrace). Besides the conventional analysis of the physiological channels, power spectral density and transfer functions of respiration, heart rate, and blood pressure variability are used to characterize respiratory sinus arrhythmia (RSA), 0.10-Hz BP oscillatory activity (Mayer-waves), and baroreflex sensitivity. The arterial pressure transducer waveforms permit noninvasive estimation of stroke volume, cardiac output, and systemic vascular resistance. Time trends in spectral composition of indices are assessed using complex demodulation. Transient dynamic changes of cardiovascular parameters at the onset of stress and recovery periods are quantified using a regression breakpoint model that optimizes piecewise linear curve fitting. Approximate entropy (ApEn) is computed to quantify the degree of chaos in heartbeat dynamics. Using our signal processing system we found distinct response patterns in subgroups of patients with coronary artery disease or anxiety disorders, which were related to specific pharmacological and behavioral factors.

  18. Research on hyperspectral dynamic scene and image sequence simulation

    NASA Astrophysics Data System (ADS)

    Sun, Dandan; Liu, Fang; Gao, Jiaobo; Sun, Kefeng; Hu, Yu; Li, Yu; Xie, Junhu; Zhang, Lei

    2016-10-01

    This paper presents a simulation method of hyperspectral dynamic scene and image sequence for hyperspectral equipment evaluation and target detection algorithm. Because of high spectral resolution, strong band continuity, anti-interference and other advantages, in recent years, hyperspectral imaging technology has been rapidly developed and is widely used in many areas such as optoelectronic target detection, military defense and remote sensing systems. Digital imaging simulation, as a crucial part of hardware in loop simulation, can be applied to testing and evaluation hyperspectral imaging equipment with lower development cost and shorter development period. Meanwhile, visual simulation can produce a lot of original image data under various conditions for hyperspectral image feature extraction and classification algorithm. Based on radiation physic model and material characteristic parameters this paper proposes a generation method of digital scene. By building multiple sensor models under different bands and different bandwidths, hyperspectral scenes in visible, MWIR, LWIR band, with spectral resolution 0.01μm, 0.05μm and 0.1μm have been simulated in this paper. The final dynamic scenes have high real-time and realistic, with frequency up to 100 HZ. By means of saving all the scene gray data in the same viewpoint image sequence is obtained. The analysis results show whether in the infrared band or the visible band, the grayscale variations of simulated hyperspectral images are consistent with the theoretical analysis results.

  19. Complex systems and the technology of variability analysis

    PubMed Central

    Seely, Andrew JE; Macklem, Peter T

    2004-01-01

    Characteristic patterns of variation over time, namely rhythms, represent a defining feature of complex systems, one that is synonymous with life. Despite the intrinsic dynamic, interdependent and nonlinear relationships of their parts, complex biological systems exhibit robust systemic stability. Applied to critical care, it is the systemic properties of the host response to a physiological insult that manifest as health or illness and determine outcome in our patients. Variability analysis provides a novel technology with which to evaluate the overall properties of a complex system. This review highlights the means by which we scientifically measure variation, including analyses of overall variation (time domain analysis, frequency distribution, spectral power), frequency contribution (spectral analysis), scale invariant (fractal) behaviour (detrended fluctuation and power law analysis) and regularity (approximate and multiscale entropy). Each technique is presented with a definition, interpretation, clinical application, advantages, limitations and summary of its calculation. The ubiquitous association between altered variability and illness is highlighted, followed by an analysis of how variability analysis may significantly improve prognostication of severity of illness and guide therapeutic intervention in critically ill patients. PMID:15566580

  20. Pixel Dynamics Analysis of Photospheric Spectral Data

    DTIC Science & Technology

    2014-11-13

    absorption lines centered at 6301.5 Å and 6302.5 Å. The two smaller absorption lines are telluric lines. The analysis is carried out for a range of...cadence and consist of 251 scan lines. These two new sets of SOLIS VSM data also revealed more inconsistent instrument movements between scans, forcing us...SOLIS VSM instrument. The wavelength range shows two photospheric absorption lines, Fe I 6301.5 Å and Fe I 6302.5 Å ), and two smaller telluric

  1. Mapping the Spectral and Biochemical Characteristics of Riparian Vegetation and Soils

    NASA Astrophysics Data System (ADS)

    Balaji Bhaskar, M. S.

    2016-12-01

    Salt cedar (Tamarix ramosissima), an invasive plant species, has successfully invaded large extents of several riparian zones along the western United States and northern Mexico. Mapping the distribution and abundance of Tamarix over these large areas through a, multi-seasonal, cost-effective monitoring approach using satellite remote sensing is very essential. Hence, the objectives of this study are: 1) to identify the spectral characteristics of the major riparian, agricultural vegetation types and soils in the Lower Colorado River (LCR) region; and 2) to determine the biochemical characteristics of the vegetation and soils. Ground truth surveys were conducted at 79 locations where the spectral reflectance measurements of vegetation, type of plant species, plant heights, soil samples and GPS co-ordinates were recorded. All the sampling was designed to coincide with the satellite overpass period. From the LANDSAT TM image, dark-object-subtracted (DOS) digital number (DN) values of six LANDSAT single bands (1-5 and 7) were extracted and all the spectral ratios and vegetative indices were calculated. The NDVI, R1,5 and R1,7 were identified as the best ratios to distinguish the major vegetation types. The LANDSAT TM color-composite spectral ratio image (NDVI, R1,5 and R1,7 as GBR) can clearly identify and map the areas infested with Tamarix. The salt cedar infested riparian soils showed high concentrations of Ca, Mg and Na concentrations compared to other soils and the spectral reflectance of soils with high Na concentrations were significantly higher in the 350-2500 nm spectral range compared to other soils. The Leaf Area Index (LAI) data shows that the salt cedar has higher LAI compared to other riparian vegetation. The spectral and satellite image analysis shows that the selected spectral ratios can be applied to multiple satellite overpasses for monitoring the seasonal progression of the riparian growth over time. Extending the image analysis over wider areas of western United States can improve the understanding of the riparian dynamics in this region.

  2. Spectral dimension of the universe in quantum gravity at a lifshitz point.

    PubMed

    Horava, Petr

    2009-04-24

    We extend the definition of "spectral dimension" d_{s} (usually defined for fractal and lattice geometries) to theories in spacetimes with anisotropic scaling. We show that in gravity with dynamical critical exponent z in D+1 dimensions, the spectral dimension of spacetime is d_{s}=1+D/z. In the case of gravity in 3+1 dimensions with z=3 in the UV which flows to z=1 in the IR, the spectral dimension changes from d_{s}=4 at large scales to d_{s}=2 at short distances. Remarkably, this is the behavior found numerically by Ambjørn et al. in their causal dynamical triangulations approach to quantum gravity.

  3. Recent climatic events controlling the hydrological and the aquifer dynamics at arid areas: The case of Huasco River watershed, northern Chile.

    PubMed

    Salas, I; Herrera, C; Luque, J A; Delgado, J; Urrutia, J; Jordan, T

    2016-11-15

    The investigation assesses the influence of recent climatic events in the water resources and the aquifer dynamics in the Huasco watershed by means of the analysis of precipitation, streamflow and piezometric levels during the last 50years. These hydrological and hydrogeological parameters were evaluated by an exploratory geostatistical analysis (semivariogram) and a spectral analysis (periodogram). Specifically, the hydrological and hydrogeological data analyses are organized according to three sub-basins, the Del Carmen River (Section I), the El Tránsito River (Section II), and the Huasco River (Section III). Data ranges for rainfall are from 1961 to 2015, for streamflow from 1964 to 2015, and for groundwater levels from 1969 to 2014, available from Water Authority of Chile. The analyses allowed the identification of cycles in the hydrological and hydrogeological records. The study area is located in a transient climatic fringe where the convergence of several climatic systems can be identified in the hydrological and hydrogeological records. Results indicate that the nival areas and the small glaciers are especially important to the recharge processes in the Huasco watershed during the spring-summer snowmelting. Water reservoirs in the main aquifer (Section III) and in the Santa Juana dam are highly sensitive to ENSO oscillation climatic patterns. The main climatic events that control this record are the El Niño and La Niña events. In addition, the climatic influence of the westerlies and the SE extratropical moisture were also identified. Spectral analysis identified the presence of a 22.9-yearcycle in piezometric levels of the alluvial aquifer of the Huasco River. This cycle is consistent with the 22-year Hale solar cycle, suggesting the existence of a solar forcing controlling the ENSO oscillations. Moreover, semivariogram and spectral analysis identified a 10.65-yearcycle and a 9.2-yearcycle in groundwater, respectively, which were attributed to the strong mode of ENSO oscillations. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Statistical quantifiers of memory for an analysis of human brain and neuro-system diseases

    NASA Astrophysics Data System (ADS)

    Demin, S. A.; Yulmetyev, R. M.; Panischev, O. Yu.; Hänggi, Peter

    2008-03-01

    On the basis of a memory function formalism for correlation functions of time series we investigate statistical memory effects by the use of appropriate spectral and relaxation parameters of measured stochastic data for neuro-system diseases. In particular, we study the dynamics of the walk of a patient who suffers from Parkinson's disease (PD), Huntington's disease (HD), amyotrophic lateral sclerosis (ALS), and compare against the data of healthy people (CO - control group). We employ an analytical method which is able to characterize the stochastic properties of stride-to-stride variations of gait cycle timing. Our results allow us to estimate quantitatively a few human locomotion function abnormalities occurring in the human brain and in the central nervous system (CNS). Particularly, the patient's gait dynamics are characterized by an increased memory behavior together with sizable fluctuations as compared with the locomotion dynamics of healthy patients. Moreover, we complement our findings with peculiar features as detected in phase-space portraits and spectral characteristics for the different data sets (PD, HD, ALS and healthy people). The evaluation of statistical quantifiers of the memory function is shown to provide a useful toolkit which can be put to work to identify various abnormalities of locomotion dynamics. Moreover, it allows one to diagnose qualitatively and quantitatively serious brain and central nervous system diseases.

  5. Femtosecond excited state studies of the two-center three-electron bond driven twisted internal charge transfer dynamics in 1,8-bis(dimethylamino)naphthalene.

    PubMed

    Balkowski, Grzegorz; Szemik-Hojniak, Anna; van Stokkum, Ivo H M; Zhang, Hong; Buma, Wybren J

    2005-04-28

    Femtosecond fluorescence upconversion and transient absorption experiments have been performed to monitor the photoinduced electronic, geometry, and solvent relaxation dynamics of 1,8-bis(dimethylamino)naphthalene dissolved in methylcyclohexane or n-hexane, n-dodecane, dichloromethane, and acetonitrile. The data have been analyzed by using a sequential global analysis method that gives rise to species associated difference spectra. The spectral features in these spectra and their dynamic behavior enable us to associate them with specific processes occurring in the molecule. The experiments show that the internal charge-transfer lpi* state is populated after internal conversion from the 1La state. In the lpi state the molecule is concluded to be subject to a large-amplitude motion, thereby confirming our previous predictions that internal charge transfer in this state is accompanied by the formation of a two-center three-electron bond between the two nitrogen atoms. Solvent relaxation and vibrational cooling in the lpi* state cannot be separated in polar solvents, but in apolar solvents a distinct vibrational cooling process in the lpi* state is discerned. The spectral and dynamic characteristics of the final species created in the experiments are shown to correspond well with what has been determined before for the relaxed emissive lpi state.

  6. Identification of the chemical components of Saussurea involucrata by high-resolution mass spectrometry and the mass spectral trees similarity filter technique.

    PubMed

    Jia, Zhixin; Wu, Caisheng; Jin, Hongtao; Zhang, Jinlan

    2014-11-15

    Saussurea involucrata is a rare traditional Chinese medicine (TCM) that displays anti-fatigue, anti-inflammatory and anti-tumor effects. In this paper, the different chemical components of Saussurea involucrata were characterized and identified over a wide dynamic range by high-performance liquid chromatography coupled with high-resolution hybrid mass spectrometry (HPLC/HRMS/MS(n)) and the mass spectral trees similarity filter (MTSF) technique. The aerial parts of Saussurea involucrata were extracted with 75% ethanol. The partial extract was separated on a chromatography column to concentrate the low-concentration compounds. Mass data were acquired using full-scan mass analysis (resolving power 50,000) with data-dependent incorporation of dynamic exclusion analysis. The identified compounds were used as templates to construct a database of mass spectral trees. Data for the unknown compounds were matched with those templates and matching candidate structures were obtained. The detected compounds were characterized based on matching to candidate structures by the MTSF technique and were further identified by their accurate mass weight, multiple-stage analysis and fragmentation patterns and through comparison with literature data. A total of 38 compounds were identified including 19 flavones, 11 phenylpropanoids and 8 sphingolipids. Among them, 7 flavonoids, 8 phenylpropanoids and 8 sphingolipids were identified for the first time in Saussurea involucrata. HPLC/HRMS/MS(n) combined with MTSF was successfully used to discover and identify the chemical compounds in Saussurea involucrata. The results indicated that this combined technique was extremely useful for the rapid detection and identification of the chemical components in TCMs. Copyright © 2014 John Wiley & Sons, Ltd.

  7. Albedos and spectral signatures determination and it connection to geological processes: Simile between Earth and other solar system bodies

    NASA Astrophysics Data System (ADS)

    Suarez, J.; Ochoa, L.; Saavedra, F.

    2017-07-01

    Remote sensing has always been the best investigation tool for planetary sciences. In this research have been used data of Surface albedo, electromagnetic spectra and satelital imagery in search of understanding glacier dynamics in some bodies of the solar system, and how it's related to their compositions and associated geological processes, this methodology is very common in icy moons studies. Through analytic software's some albedos map's and geomorphological analysis were made that allow interpretation of different types of ice in the glacier's and it's interaction with other materials, almost all the images were worked in the visible and infrared ranges of the spectrum; spectral data were later used to connect the reflectance whit chemical and reologic properties of the compounds studied. It have been concluded that the albedo analysis is an effective tool to differentiate materials in the bodies surfaces, but the application of spectral data is necessary to know the exact compounds of the glaciers and to have a better understanding of the icy bodies.

  8. DOE Office of Scientific and Technical Information (OSTI.GOV)

    De Marco, Luigi; Department of Chemistry, James Frank Institute, and The Institute for Biophysical Dynamics, The University of Chicago, 929 E 57th Street, Chicago, Illinois 60637; Fournier, Joseph A.

    Water’s extended hydrogen-bond network results in rich and complex dynamics on the sub-picosecond time scale. In this paper, we present a comprehensive analysis of the two-dimensional infrared (2D IR) spectrum of O–H stretching vibrations in liquid H{sub 2}O and their interactions with bending and intermolecular vibrations. By exploring the dependence of the spectrum on waiting time, temperature, and laser polarization, we refine our molecular picture of water’s complex ultrafast dynamics. The spectral evolution following excitation of the O–H stretching resonance reveals vibrational dynamics on the 50–300 fs time scale that are dominated by intermolecular delocalization. These O–H stretch excitons aremore » a result of the anharmonicity of the nuclear potential energy surface that arises from the hydrogen-bonding interaction. The extent of O–H stretching excitons is characterized through 2D depolarization measurements that show spectrally dependent delocalization in agreement with theoretical predictions. Furthermore, we show that these dynamics are insensitive to temperature, indicating that the exciton dynamics alone set the important time scales in the system. Finally, we study the evolution of the O–H stretching mode, which shows highly non-adiabatic dynamics suggestive of vibrational conical intersections. We argue that the so-called heating, commonly observed within ∼1 ps in nonlinear IR spectroscopy of water, is a nonequilibrium state better described by a kinetic temperature rather than a Boltzmann distribution. Our conclusions imply that the collective nature of water vibrations should be considered in describing aqueous solvation.« less

  9. 2D signature for detection and identification of drugs

    NASA Astrophysics Data System (ADS)

    Trofimov, Vyacheslav A.; Varentsova, Svetlana A.; Shen, Jingling; Zhang, Cunlin; Zhou, Qingli; Shi, Yulei

    2011-06-01

    The method of spectral dynamics analysis (SDA-method) is used for obtaining the2D THz signature of drugs. This signature is used for the detection and identification of drugs with similar Fourier spectra by transmitted THz signal. We discuss the efficiency of SDA method for the identification problem of pure methamphetamine (MA), methylenedioxyamphetamine (MDA), 3, 4-methylenedioxymethamphetamine (MDMA) and Ketamine.

  10. EO-1 Hyperion reflectance time series at calibration and validation sites: stability and sensitivity to seasonal dynamics

    Treesearch

    Petya K. Entcheva Campbell; Elizabeth M. Middleton; Kurt J. Thome; Raymond F. Kokaly; Karl Fred Huemmrich; David Lagomasino; Kimberly A. Novick; Nathaniel A. Brunsell

    2013-01-01

    This study evaluated Earth Observing 1 (EO-1) Hyperion reflectance time series at established calibration sites to assess the instrument stability and suitability for monitoring vegetation functional parameters. Our analysis using three pseudo-invariant calibration sites in North America indicated that the reflectance time series are devoid of apparent spectral trends...

  11. A spectral dynamic stiffness method for free vibration analysis of plane elastodynamic problems

    NASA Astrophysics Data System (ADS)

    Liu, X.; Banerjee, J. R.

    2017-03-01

    A highly efficient and accurate analytical spectral dynamic stiffness (SDS) method for modal analysis of plane elastodynamic problems based on both plane stress and plane strain assumptions is presented in this paper. First, the general solution satisfying the governing differential equation exactly is derived by applying two types of one-dimensional modified Fourier series. Then the SDS matrix for an element is formulated symbolically using the general solution. The SDS matrices are assembled directly in a similar way to that of the finite element method, demonstrating the method's capability to model complex structures. Any arbitrary boundary conditions are represented accurately in the form of the modified Fourier series. The Wittrick-Williams algorithm is then used as the solution technique where the mode count problem (J0) of a fully-clamped element is resolved. The proposed method gives highly accurate solutions with remarkable computational efficiency, covering low, medium and high frequency ranges. The method is applied to both plane stress and plane strain problems with simple as well as complex geometries. All results from the theory in this paper are accurate up to the last figures quoted to serve as benchmarks.

  12. Cross-dialectal variation in formant dynamics of American English vowels

    PubMed Central

    Fox, Robert Allen; Jacewicz, Ewa

    2009-01-01

    This study aims to characterize the nature of the dynamic spectral change in vowels in three distinct regional varieties of American English spoken in the Western North Carolina, in Central Ohio, and in Southern Wisconsin. The vowels ∕ɪ, ε, e, æ, aɪ∕ were produced by 48 women for a total of 1920 utterances and were contained in words of the structure ∕bVts∕ and ∕bVdz∕ in sentences which elicited nonemphatic and emphatic vowels. Measurements made at the vowel target (i.e., the central 60% of the vowel) produced a set of acoustic parameters which included position and movement in the F1 by F2 space, vowel duration, amount of spectral change [measured as vector length (VL) and trajectory length (TL)], and spectral rate of change. Results revealed expected variation in formant dynamics as a function of phonetic factors (vowel emphasis and consonantal context). However, for each vowel and for each measure employed, dialect was a strong source of variation in vowel-inherent spectral change. In general, the dialect-specific nature and amount of spectral change can be characterized quite effectively by position and movement in the F1 by F2 space, vowel duration, TL (but not VL which underestimates formant movement), and spectral rate of change. PMID:19894839

  13. Spectrally- and Time-Resolved Sum Frequency Generation (STiR-SFG): a new tool for ultrafast hydrogen bond dynamics at interfaces.

    NASA Astrophysics Data System (ADS)

    Benderskii, Alexander; Bordenyuk, Andrey; Weeraman, Champika

    2006-03-01

    The recently developed spectrally- and time-resolved Sum Frequency Generation (STiR-SFG) is a surface-selective 3-wave mixing (IR+visible) spectroscopic technique capable of measuring ultrafast spectral evolution of vibrational coherences. A detailed description of this measurement will be presented, and a noniterative method or deconvolving the laser pulses will be introduced to obtain the molecular response function. STiR-SFG, combined with the frequency-domain SFG spectroscopy, was applied to study hydrogen bonding dynamics at aqueous interfaces (D2O/CaF2). Spectral dynamics of the OD-stretch on the 50-150 fs time scale provides real-time observation of ultrafast H-bond rearrangement. Tuning the IR wavelength to the blue or red side of the OD-stretch transition, we selectively monitor the dynamics of different sub-ensembles in the distribution of the H-bond structures. The blue-side excitation (weaker H-bonding) shows monotonic red-shift of the OD-frequency. In contrast, the red-side excitation (stronger H-bonding structures) produces a blue-shift and a recursion, which may indicate the presence of an underdamped intermolecular mode of interfacial water. Effect of electrolyte concentration on the H-bond dynamics will be discussed.

  14. S-EMG signal compression based on domain transformation and spectral shape dynamic bit allocation

    PubMed Central

    2014-01-01

    Background Surface electromyographic (S-EMG) signal processing has been emerging in the past few years due to its non-invasive assessment of muscle function and structure and because of the fast growing rate of digital technology which brings about new solutions and applications. Factors such as sampling rate, quantization word length, number of channels and experiment duration can lead to a potentially large volume of data. Efficient transmission and/or storage of S-EMG signals are actually a research issue. That is the aim of this work. Methods This paper presents an algorithm for the data compression of surface electromyographic (S-EMG) signals recorded during isometric contractions protocol and during dynamic experimental protocols such as the cycling activity. The proposed algorithm is based on discrete wavelet transform to proceed spectral decomposition and de-correlation, on a dynamic bit allocation procedure to code the wavelets transformed coefficients, and on an entropy coding to minimize the remaining redundancy and to pack all data. The bit allocation scheme is based on mathematical decreasing spectral shape models, which indicates a shorter digital word length to code high frequency wavelets transformed coefficients. Four bit allocation spectral shape methods were implemented and compared: decreasing exponential spectral shape, decreasing linear spectral shape, decreasing square-root spectral shape and rotated hyperbolic tangent spectral shape. Results The proposed method is demonstrated and evaluated for an isometric protocol and for a dynamic protocol using a real S-EMG signal data bank. Objective performance evaluations metrics are presented. In addition, comparisons with other encoders proposed in scientific literature are shown. Conclusions The decreasing bit allocation shape applied to the quantized wavelet coefficients combined with arithmetic coding results is an efficient procedure. The performance comparisons of the proposed S-EMG data compression algorithm with the established techniques found in scientific literature have shown promising results. PMID:24571620

  15. Monitoring Fatigue Status with HRV Measures in Elite Athletes: An Avenue Beyond RMSSD?

    PubMed Central

    Schmitt, Laurent; Regnard, Jacques; Millet, Grégoire P.

    2015-01-01

    Among the tools proposed to assess the athlete's “fatigue,” the analysis of heart rate variability (HRV) provides an indirect evaluation of the settings of autonomic control of heart activity. HRV analysis is performed through assessment of time-domain indices, the square root of the mean of the sum of the squares of differences between adjacent normal R-R intervals (RMSSD) measured during short (5 min) recordings in supine position upon awakening in the morning and particularly the logarithm of RMSSD (LnRMSSD) has been proposed as the most useful resting HRV indicator. However, if RMSSD can help the practitioner to identify a global “fatigue” level, it does not allow discriminating different types of fatigue. Recent results using spectral HRV analysis highlighted firstly that HRV profiles assessed in supine and standing positions are independent and complementary; and secondly that using these postural profiles allows the clustering of distinct sub-categories of “fatigue.” Since, cardiovascular control settings are different in standing and lying posture, using the HRV figures of both postures to cluster fatigue state embeds information on the dynamics of control responses. Such, HRV spectral analysis appears more sensitive and enlightening than time-domain HRV indices. The wealthier information provided by this spectral analysis should improve the monitoring of the adaptive training-recovery process in athletes. PMID:26635629

  16. Mining the HST "Advanced Spectral Library (ASTRAL)": The Evolution of Winds from non-coronal to hybrid giant stars

    NASA Astrophysics Data System (ADS)

    Nielsen, Krister E.; Carpenter, Ken G.; Kober, Gladys V.; Rau, Gioia

    2018-01-01

    The HST/STIS treasury program ASTRAL enables investigations of the character and dynamics of the wind and chromosphere of cool stars, using high quality spectral data. This paper shows how the wind features change with spectral class by comparing the non-coronal objects (Alpha Ori, Gamma Cru) with the hybrid stars (Gamma Dra, Beta Gem). In particular we study the intrinsic strength variation of the numerous FeII profiles observed in the near-ultraviolet HST spectrum that are sensitive to the wind opacity, turbulence and flow velocity. The FeII relative emission strength and wavelengths shifts between the absorption and emission components reflects the acceleration of the wind from the base of the chromosphere. We present the analysis of the outflowing wind characteristics when transitioning from the cool non-coronal objects toward the warmer objects with chromospheric emission from significantly hotter environments.

  17. [Spectral characteristics of decomposition of incorporated straw in compound polluted arid loess].

    PubMed

    Fan, Chun-Hui; Zhang, Ying-Chao; Xu, Ji-Ting; Wang, Jia-Hong

    2014-04-01

    The original loess from western China was used as soil sample, the spectral methods of scanning electron microscope-energy dispersive X-ray spectroscopy (SEM-EDS), elemental analysis, Fourier transform infrared spectroscopy (FT-IR) and 13C nuclear magnetic resonance (13C NMR) were used to investigate the characteristics of decomposed straw and formed humic acids in compound polluted arid loess. The SEM micrographs show the variation from dense to decomposed surface, and finally to damaged structure, and the EDS data reveal the phenomenon of element transfer. The newly-formed humic acids are of low aromaticity, helpful for increasing the activity of organic matters in loess. The FTIR spectra in the whole process are similar, indicating the complexity of transformation dynamics of humic acids. The molecular structure of humic acids becomes simpler, shown from 13C NMR spectra. The spectral methods are useful for humic acids identification in loess region in straw incorporation process.

  18. The development of a modified spectral ripple test.

    PubMed

    Aronoff, Justin M; Landsberger, David M

    2013-08-01

    Poor spectral resolution can be a limiting factor for hearing impaired listeners, particularly for complex listening tasks such as speech understanding in noise. Spectral ripple tests are commonly used to measure spectral resolution, but these tests contain a number of potential confounds that can make interpretation of the results difficult. To measure spectral resolution while avoiding those confounds, a modified spectral ripple test with dynamically changing ripples was created, referred to as the spectral-temporally modulated ripple test (SMRT). This paper describes the SMRT and provides evidence that it is sensitive to changes in spectral resolution.

  19. Dynamic Optical Grating Device and Associated Method for Modulating Light

    NASA Technical Reports Server (NTRS)

    Park, Yeonjoon (Inventor); Choi, Sang H. (Inventor); King, Glen C. (Inventor); Chu, Sang-Hyon (Inventor)

    2012-01-01

    A dynamic optical grating device and associated method for modulating light is provided that is capable of controlling the spectral properties and propagation of light without moving mechanical components by the use of a dynamic electric and/or magnetic field. By changing the electric field and/or magnetic field, the index of refraction, the extinction coefficient, the transmittivity, and the reflectivity fo the optical grating device may be controlled in order to control the spectral properties of the light reflected or transmitted by the device.

  20. Complexity and dynamics of topological and community structure in complex networks

    NASA Astrophysics Data System (ADS)

    Berec, Vesna

    2017-07-01

    Complexity is highly susceptible to variations in the network dynamics, reflected on its underlying architecture where topological organization of cohesive subsets into clusters, system's modular structure and resulting hierarchical patterns, are cross-linked with functional dynamics of the system. Here we study connection between hierarchical topological scales of the simplicial complexes and the organization of functional clusters - communities in complex networks. The analysis reveals the full dynamics of different combinatorial structures of q-th-dimensional simplicial complexes and their Laplacian spectra, presenting spectral properties of resulting symmetric and positive semidefinite matrices. The emergence of system's collective behavior from inhomogeneous statistical distribution is induced by hierarchically ordered topological structure, which is mapped to simplicial complex where local interactions between the nodes clustered into subcomplexes generate flow of information that characterizes complexity and dynamics of the full system.

  1. Dynamic analysis of beam-cable coupled systems using Chebyshev spectral element method

    NASA Astrophysics Data System (ADS)

    Huang, Yi-Xin; Tian, Hao; Zhao, Yang

    2017-10-01

    The dynamic characteristics of a beam-cable coupled system are investigated using an improved Chebyshev spectral element method in order to observe the effects of adding cables on the beam. The system is modeled as a double Timoshenko beam system interconnected by discrete springs. Utilizing Chebyshev series expansion and meshing the system according to the locations of its connections, numerical results of the natural frequencies and mode shapes are obtained using only a few elements, and the results are validated by comparing them with the results of a finite-element method. Then the effects of the cable parameters and layout of connections on the natural frequencies and mode shapes of a fixed-pinned beam are studied. The results show that the modes of a beam-cable coupled system can be classified into two types, beam mode and cable mode, according to the dominant deformation. To avoid undesirable vibrations of the cable, its parameters should be controlled in a reasonable range, or the layout of the connections should be optimized.

  2. Transient dynamic analysis of the Bao'An Stadium

    NASA Astrophysics Data System (ADS)

    Knight, David; Whitefield, Rowan; Nhieu, Eric; Tahmasebinia, Faham; Ansourian, Peter; Alonso-Marroquin, Fernando

    2016-08-01

    Bao'An Stadium is a unique structure that utilises 54m span cantilevers with tensioned members to support the roof. This report involves a simplified finite element model of Bao'An stadium using Strand7 to analyse the effects of deflections, buckling and earthquake loading. Modelling the cantilevers of the original structure with a double curvature was problematic due to unrealistic deflections and no total mass participation using the Spectral Response Solver. To rectify this, a simplified symmetrical stadium was created and the cable free length attribute was used to induce tension in the inner ring and bottom chord members to create upwards deflection. Further, in place of the Spectral Response Solver, the Transient Linear Dynamic Solver was inputted with an El-Centro earthquake. The stadium's response to a 0.20g earthquake and self-weight indicated the deflections satisfied AS1170.0, the loading in the columns was below the critical buckling load, and all structural members satisfied AS4100.

  3. IMAGES: A digital computer program for interactive modal analysis and gain estimation for eigensystem synthesis

    NASA Technical Reports Server (NTRS)

    Jones, R. L.

    1984-01-01

    An interactive digital computer program for modal analysis and gain estimation for eigensystem synthesis was written. Both mathematical and operation considerations are described; however, the mathematical presentation is limited to those concepts essential to the operational capability of the program. The program is capable of both modal and spectral synthesis of multi-input control systems. It is user friendly, has scratchpad capability and dynamic memory, and can be used to design either state or output feedback systems.

  4. Impacts of spectral nudging on the simulated surface air temperature in summer compared with the selection of shortwave radiation and land surface model physics parameterization in a high-resolution regional atmospheric model

    NASA Astrophysics Data System (ADS)

    Park, Jun; Hwang, Seung-On

    2017-11-01

    The impact of a spectral nudging technique for the dynamical downscaling of the summer surface air temperature in a high-resolution regional atmospheric model is assessed. The performance of this technique is measured by comparing 16 analysis-driven simulation sets of physical parameterization combinations of two shortwave radiation and four land surface model schemes of the model, which are known to be crucial for the simulation of the surface air temperature. It is found that the application of spectral nudging to the outermost domain has a greater impact on the regional climate than any combination of shortwave radiation and land surface model physics schemes. The optimal choice of two model physics parameterizations is helpful for obtaining more realistic spatiotemporal distributions of land surface variables such as the surface air temperature, precipitation, and surface fluxes. However, employing spectral nudging adds more value to the results; the improvement is greater than using sophisticated shortwave radiation and land surface model physical parameterizations. This result indicates that spectral nudging applied to the outermost domain provides a more accurate lateral boundary condition to the innermost domain when forced by analysis data by securing the consistency with large-scale forcing over a regional domain. This consequently indirectly helps two physical parameterizations to produce small-scale features closer to the observed values, leading to a better representation of the surface air temperature in a high-resolution downscaled climate.

  5. A spectral approach for discrete dislocation dynamics simulations of nanoindentation

    NASA Astrophysics Data System (ADS)

    Bertin, Nicolas; Glavas, Vedran; Datta, Dibakar; Cai, Wei

    2018-07-01

    We present a spectral approach to perform nanoindentation simulations using three-dimensional nodal discrete dislocation dynamics. The method relies on a two step approach. First, the contact problem between an indenter of arbitrary shape and an isotropic elastic half-space is solved using a spectral iterative algorithm, and the contact pressure is fully determined on the half-space surface. The contact pressure is then used as a boundary condition of the spectral solver to determine the resulting stress field produced in the simulation volume. In both stages, the mechanical fields are decomposed into Fourier modes and are efficiently computed using fast Fourier transforms. To further improve the computational efficiency, the method is coupled with a subcycling integrator and a special approach is devised to approximate the displacement field associated with surface steps. As a benchmark, the method is used to compute the response of an elastic half-space using different types of indenter. An example of a dislocation dynamics nanoindentation simulation with complex initial microstructure is presented.

  6. Development of new two-dimensional spectral/spatial code based on dynamic cyclic shift code for OCDMA system

    NASA Astrophysics Data System (ADS)

    Jellali, Nabiha; Najjar, Monia; Ferchichi, Moez; Rezig, Houria

    2017-07-01

    In this paper, a new two-dimensional spectral/spatial codes family, named two dimensional dynamic cyclic shift codes (2D-DCS) is introduced. The 2D-DCS codes are derived from the dynamic cyclic shift code for the spectral and spatial coding. The proposed system can fully eliminate the multiple access interference (MAI) by using the MAI cancellation property. The effect of shot noise, phase-induced intensity noise and thermal noise are used to analyze the code performance. In comparison with existing two dimensional (2D) codes, such as 2D perfect difference (2D-PD), 2D Extended Enhanced Double Weight (2D-Extended-EDW) and 2D hybrid (2D-FCC/MDW) codes, the numerical results show that our proposed codes have the best performance. By keeping the same code length and increasing the spatial code, the performance of our 2D-DCS system is enhanced: it provides higher data rates while using lower transmitted power and a smaller spectral width.

  7. Dielectric spectroscopy in benzophenone: the beta relaxation and its relation to the mode-coupling Cole-Cole peak.

    PubMed

    Pardo, L C; Lunkenheimer, P; Loidl, A

    2007-09-01

    We report a thorough characterization of the glassy dynamics of benzophenone by broadband dielectric spectroscopy. We detect a well-pronounced beta relaxation peak developing into an excess wing with increasing temperature. A previous analysis of results from Optical-Kerr-effect measurements of this material within the mode-coupling theory revealed a high-frequency Cole-Cole peak. We address the question if this phenomenon also may explain the Johari-Goldstein beta relaxation, a so-far unexplained spectral feature inherent to glass-forming matter, mainly observed in dielectric spectra. Our results demonstrate that according to the present status of theory, both spectral features seem not to be directly related.

  8. Multi-site recording and spectral analysis of spontaneous photon emission from human body.

    PubMed

    Wijk, Eduard P A Van; Wijk, Roeland Van

    2005-04-01

    In the past years, research on ultraweak photon emission (UPE) from human body has increased for isolated cells and tissues. However, there are only limited data on UPE from the whole body, in particular from the hands. To describe a protocol for the management of subjects that (1) avoids interference with light-induced longterm delayed luminescence, and (2) includes the time slots for recording photon emission. The protocol was utilised for multi-site recording of 4 subjects at different times of the day and different seasons, and for one subject to complete spectral analysis of emission from different body locations. An especially selected low-noise end-window photomultiplier was utilised for the detection of ultraviolet / visible light (200-650 nm) photon emission. For multi-site recording it was manipulated in three directions in a darkroom with a very low count rate. A series of cut-off filters was used for spectral analysis of UPE. 29 body sites were selected such that the distribution in UPE could be studied as right-left symmetry, dorsal-ventral symmetry, and the ratio between the central body part and extremities. Generally, the fluctuation in photon counts over the body was lower in the morning than in the afternoon. The thorax-abdomen region emitted lowest and most constantly. The upper extremities and the head region emitted most and increasingly over the day. Spectral analysis of low, intermediate and high emission from the superior frontal part of the right leg, the forehead and the palms in the sensitivity range of the photomultiplier showed the major spontaneous emission at 470-570 nm. The central palm area of hand emission showed a larger contribution of the 420-470 nm range in the spectrum of spontaneous emission from the hand in autumn/winter. The spectrum of delayed luminescence from the hand showed major emission in the same range as spontaneous emission. Examples of multi-site UPE recordings and spectral analysis revealed individual patterns and dynamics of spontaneous UPE over the body, and spectral differences over the body. The spectral data suggest that measurements might well provide quantitative data on the individual pattern of peroxidative and anti-oxidative processes in vivo. We expect that the measurements provide physiological information that can be useful in clinical examination.

  9. Characterization and Analysis of InGaAsSb Detectors

    NASA Technical Reports Server (NTRS)

    Abedin, M. Nurul; Refaat, Tamer F.; Joshi, Ravindra P.; Sulima, Oleg V.; Mauk, Michael; Singh, Upendra N.

    2003-01-01

    Profiling of atmospheric CO2 at 2 micron wavelength using the LIDAR technique, has recently gained interest. Although several detectors might be suitable for this application, an ideal device would have high gain, low noise and narrow spectral response peaking around the wavelength of interest. This increases the detector signal-to-noise ratio and minimizes the background signal, thereby increasing the device sensitivity and dynamic range. Detectors meeting the above idealized criteria are commercially unavailable for this particular wavelength. In this paper, the characterization and analysis of Sb-based detectors for 2 micron lidar applications are presented. The detectors were manufactured by AstroPower, Inc., with an InGaAsSb absorbing layer and AlGaAsSb passivating layer. The characterization experiments included spectral response, current versus voltage and noise measurements. The effect of the detectors bias voltage and temperature on its performance, have been investigated as well. The detectors peak responsivity is located at the 2 micron wavelength. Comparing three detector samples, an optimization of the spectral response around the 2 micron wavelength, through a narrower spectral period was observed. Increasing the detector bias voltage enhances the device gain at the narrow spectral range, while cooling the device reduces the cut-off wavelength and lowers its noise. Noise-equivalent-power analysis results in a value as low as 4 x 10(exp -12) W/Hz(exp 1/2) corresponding to D* of 1 x 10(exp 10) cmHz(exp 1/2)/W, at -1 V and 20 C. Discussions also include device operational physics and optimization guidelines, taking into account peculiarity of the Type II heterointerface and transport mechanisms under these conditions.

  10. Macrocyclic molecular rotors with bridged steroidal frameworks.

    PubMed

    Czajkowska-Szczykowska, Dorota; Rodríguez-Molina, Braulio; Magaña-Vergara, Nancy E; Santillan, Rosa; Morzycki, Jacek W; Garcia-Garibay, Miguel A

    2012-11-16

    In this work, we describe the synthesis and solid-state dynamics of isomeric molecular rotors 7E and 7Z, consisting of two androstane steroidal frameworks linked by the D rings by triple bonds at their C17 positions to a 1,4-phenylene rotator. They are also linked by the A rings by an alkenyl diester bridge to restrict the conformational flexibility of the molecules and reduce the number of potential crystalline arrays. The analysis of the resulting molecular structures and packing motifs offered insights of the internal dynamics that were later elucidated by means of line shape analyses of the spectral features obtained through variable-temperature solid-state (13)C NMR; such analysis revealed rotations in the solid state occurring at kilohertz frequency at room temperature.

  11. Spectral collocation methods

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.; Kopriva, D. A.; Patera, A. T.

    1987-01-01

    This review covers the theory and application of spectral collocation methods. Section 1 describes the fundamentals, and summarizes results pertaining to spectral approximations of functions. Some stability and convergence results are presented for simple elliptic, parabolic, and hyperbolic equations. Applications of these methods to fluid dynamics problems are discussed in Section 2.

  12. Spectral analysis of the stick-slip phenomenon in "oral" tribological texture evaluation.

    PubMed

    Sanahuja, Solange; Upadhyay, Rutuja; Briesen, Heiko; Chen, Jianshe

    2017-08-01

    "Oral" tribology has become a new paradigm in food texture studies to understand complex texture attributes, such as creaminess, oiliness, and astringency, which could not be successfully characterized by traditional texture analysis nor by rheology. Stick-slip effects resulting from intermittent sliding motion during kinetic friction of oral mucosa could constitute an additional determining factor of sensory perception where traditional friction coefficient values and their Stribeck regimes fail in predicting different lubricant (food bolus and saliva) behaviors. It was hypothesized that the observed jagged behavior of most sliding force curves are due to stick-slip effects and depend on test velocity, normal load, surface roughness as well as lubricant type. Therefore, different measurement set-ups were investigated: sliding velocities from 0.01 to 40 mm/s, loads of 0.5 and 2.5 N as well as a smooth and a textured silicone contact surface. Moreover, dry contact measurements were compared to model food systems, such as water, oil, and oil-in-water emulsions. Spectral analysis permitted to extract the distribution of stick-slip magnitudes for specific wave numbers, characterizing the occurrence of jagged force peaks per unit sliding distance, similar to frequencies per unit time. The spectral features were affected by all the above mentioned tested factors. Stick-slip created vibration frequencies in the range of those detected by oral mechanoreceptors (0.3-400 Hz). The study thus provides a new insight into the use of tribology in food psychophysics. Dynamic spectral analysis has been applied for the first time to the force-displacement curves in "oral" tribology. Analyzing the stick-slip phenomenon in the dynamic friction provides new information that is generally overlooked or confused with machine noise and which may help to understand friction-related sensory attributes. This approach allows us to differentiate samples that have similar friction coefficient, but are perceived differently in the mouth. The next step of our research will be to combine spectral attributes, such as the magnitudes of specific wave number bands and possibly their evolution during sliding, together with friction coefficient and viscosity values of foods with sensory results. The highest potential lies in predicting smoothness in opposition to roughness of a surface, such as a rough tongue when eating astringent or dry foods, or of particles when eating grainy foods. The effects of food ingredients at the nano to macroscales can then be used to optimize a specific lubrication behavior. © 2017 Wiley Periodicals, Inc.

  13. Remote sensing of the biological dynamics of large-scale salt evaporation ponds

    NASA Technical Reports Server (NTRS)

    Richardson, Laurie L.; Bachoon, Dave; Ingram-Willey, Vebbra; Chow, Colin C.; Weinstock, Kenneth

    1992-01-01

    Optical properties of salt evaporation ponds associated with Exportadora de Sal, a salt production company in Baja California Sur, Mexico, were analyzed using a combination of spectroradiometer and extracted pigment data, and Landsat-5 Thematic Mapper imagery. The optical characteristics of each pond are determined by the biota, which consists of dense populations of algae and photosynthetic bacteria containing a wide variety of photosynthetic and photoprotective pigments. Analysis has shown that spectral and image data can differentiate between taxonomic groups of the microbiota, detect changes in population distributions, and reveal large-scale seasonal dynamics.

  14. Spectral dynamics of square pulses in passively mode-locked fiber lasers

    NASA Astrophysics Data System (ADS)

    Semaan, Georges; Komarov, Andrey; Niang, Alioune; Salhi, Mohamed; Sanchez, François

    2018-02-01

    We investigate experimentally and numerically the spectral dynamics of square pulses generated in passively mode-locked fiber lasers under the dissipative soliton resonance. The features of the transition from the single-peak spectral profile to the doublet spectrum with increasing pump power are studied. The used master equation takes into account the gain saturation, the quadratic frequency dispersion of the gain and the refractive index, and the cubic-quintic nonlinearity of the losses and refractive index. Experimental data are obtained for an Er:Yb-doped fiber ring laser. The theoretical and experimental results are in good agreement with each other.

  15. Measuring Glial Metabolism in Repetitive Brain Trauma and Alzheimer’s Disease

    DTIC Science & Technology

    2016-09-01

    Six methods: Single value decomposition (SVD), wavelet, sliding window, sliding window with Gaussian weighting, spline and spectral improvements...comparison of a range of different denoising methods for dynamic MRS. Six denoising methods were considered: Single value decomposition (SVD), wavelet...project by improving the software required for the data analysis by developing six different denoising methods. He also assisted with the testing

  16. Beyond harmonic sounds in a simple model for birdsong production.

    PubMed

    Amador, Ana; Mindlin, Gabriel B

    2008-12-01

    In this work we present an analysis of the dynamics displayed by a simple bidimensional model of labial oscillations during birdsong production. We show that the same model capable of generating tonal sounds can present, for a wide range of parameters, solutions which are spectrally rich. The role of physiologically sensible parameters is discussed in each oscillatory regime, allowing us to interpret previously reported data.

  17. Deep, Broadband Spectral Line Surveys of Molecule-rich Interstellar Clouds

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Widicus Weaver, Susanna L.; Laas, Jacob C.; Zou, Luyao

    2017-09-01

    Spectral line surveys are an indispensable tool for exploring the physical and chemical evolution of astrophysical environments due to the vast amount of data that can be obtained in a relatively short amount of time. We present deep, broadband spectral line surveys of 30 interstellar clouds using two broadband λ  = 1.3 mm receivers at the Caltech Submillimeter Observatory. This information can be used to probe the influence of physical environment on molecular complexity. We observed a wide variety of sources to examine the relative abundances of organic molecules as they relate to the physical properties of the source (i.e., temperature,more » density, dynamics, etc.). The spectra are highly sensitive, with noise levels ≤25 mK at a velocity resolution of ∼0.35 km s{sup −1}. In the initial analysis presented here, column densities and rotational temperatures have been determined for the molecular species that contribute significantly to the spectral line density in this wavelength regime. We present these results and discuss their implications for complex molecule formation in the interstellar medium.« less

  18. Titan's Atmospheric Composition from Observations by the Cassini Infrared Spectrometer

    NASA Technical Reports Server (NTRS)

    Abbas, M. M.; LeClair, A.; Flasar, F. M.; Kunde, V. G.; Conrath, B. J.; Coustenis, A.; Jennings, D. J.; Nixon, C. A.; Brasunas, J.; Achterberg, R. K.

    2006-01-01

    The Composite Infrared Spectrometer (CIRS) aboard the Cassini spacecraft has been making observations during the fly-bys of Titan since the Saturn-Orbit-Insertion in July 2004. The observations provide infrared them1 emission spectra of Titan s atmosphere in three spectral channels covering the 10/cm to 1400/cm spectral region, with variable spectral resolutions of 0.53/cm and 2.8/cm. The uniquely observed spectra exhibit rotational and vibrational-rotational spectral lines of the molecular constituents of Titan s atmosphere that may be analyzed to retrieve information about the composition, thermal structure, and physical and dynamical processes in the remotely sensed atmosphere. We present an analysis of Titan's infrared spectra observed during July 2004 (TO), December 2004 (Tb) and February 2005 (T3), for retrieval of the stratospheric thermal structure, distribution of the hydrocarbons, nitriles, and oxygen bearing constituents, such as C2H2, C2H4, C2H6, C3H8, HCN, HC3N, CO, and CO2 . Preliminary results on the distribution and opacity of haze in Titan s atmosphere are discussed.

  19. The software and algorithms for hyperspectral data processing

    NASA Astrophysics Data System (ADS)

    Shyrayeva, Anhelina; Martinov, Anton; Ivanov, Victor; Katkovsky, Leonid

    2017-04-01

    Hyperspectral remote sensing technique is widely used for collecting and processing -information about the Earth's surface objects. Hyperspectral data are combined to form a three-dimensional (x, y, λ) data cube. Department of Aerospace Research of the Institute of Applied Physical Problems of the Belarusian State University presents a general model of the software for hyperspectral image data analysis and processing. The software runs in Windows XP/7/8/8.1/10 environment on any personal computer. This complex has been has been written in C++ language using QT framework and OpenGL for graphical data visualization. The software has flexible structure that consists of a set of independent plugins. Each plugin was compiled as Qt Plugin and represents Windows Dynamic library (dll). Plugins can be categorized in terms of data reading types, data visualization (3D, 2D, 1D) and data processing The software has various in-built functions for statistical and mathematical analysis, signal processing functions like direct smoothing function for moving average, Savitzky-Golay smoothing technique, RGB correction, histogram transformation, and atmospheric correction. The software provides two author's engineering techniques for the solution of atmospheric correction problem: iteration method of refinement of spectral albedo's parameters using Libradtran and analytical least square method. The main advantages of these methods are high rate of processing (several minutes for 1 GB data) and low relative error in albedo retrieval (less than 15%). Also, the software supports work with spectral libraries, region of interest (ROI) selection, spectral analysis such as cluster-type image classification and automatic hypercube spectrum comparison by similarity criterion with similar ones from spectral libraries, and vice versa. The software deals with different kinds of spectral information in order to identify and distinguish spectrally unique materials. Also, the following advantages should be noted: fast and low memory hypercube manipulation features, user-friendly interface, modularity, and expandability.

  20. Combined process automation for large-scale EEG analysis.

    PubMed

    Sfondouris, John L; Quebedeaux, Tabitha M; Holdgraf, Chris; Musto, Alberto E

    2012-01-01

    Epileptogenesis is a dynamic process producing increased seizure susceptibility. Electroencephalography (EEG) data provides information critical in understanding the evolution of epileptiform changes throughout epileptic foci. We designed an algorithm to facilitate efficient large-scale EEG analysis via linked automation of multiple data processing steps. Using EEG recordings obtained from electrical stimulation studies, the following steps of EEG analysis were automated: (1) alignment and isolation of pre- and post-stimulation intervals, (2) generation of user-defined band frequency waveforms, (3) spike-sorting, (4) quantification of spike and burst data and (5) power spectral density analysis. This algorithm allows for quicker, more efficient EEG analysis. Copyright © 2011 Elsevier Ltd. All rights reserved.

  1. NASA Fundamental Remote Sensing Science Research Program

    NASA Technical Reports Server (NTRS)

    1984-01-01

    The NASA Fundamental Remote Sensing Research Program is described. The program provides a dynamic scientific base which is continually broadened and from which future applied research and development can draw support. In particular, the overall objectives and current studies of the scene radiation and atmospheric effect characterization (SRAEC) project are reviewed. The SRAEC research can be generically structured into four types of activities including observation of phenomena, empirical characterization, analytical modeling, and scene radiation analysis and synthesis. The first three activities are the means by which the goal of scene radiation analysis and synthesis is achieved, and thus are considered priority activities during the early phases of the current project. Scene radiation analysis refers to the extraction of information describing the biogeophysical attributes of the scene from the spectral, spatial, and temporal radiance characteristics of the scene including the atmosphere. Scene radiation synthesis is the generation of realistic spectral, spatial, and temporal radiance values for a scene with a given set of biogeophysical attributes and atmospheric conditions.

  2. Spectral analysis based on fast Fourier transformation (FFT) of surveillance data: the case of scarlet fever in China.

    PubMed

    Zhang, T; Yang, M; Xiao, X; Feng, Z; Li, C; Zhou, Z; Ren, Q; Li, X

    2014-03-01

    Many infectious diseases exhibit repetitive or regular behaviour over time. Time-domain approaches, such as the seasonal autoregressive integrated moving average model, are often utilized to examine the cyclical behaviour of such diseases. The limitations for time-domain approaches include over-differencing and over-fitting; furthermore, the use of these approaches is inappropriate when the assumption of linearity may not hold. In this study, we implemented a simple and efficient procedure based on the fast Fourier transformation (FFT) approach to evaluate the epidemic dynamic of scarlet fever incidence (2004-2010) in China. This method demonstrated good internal and external validities and overcame some shortcomings of time-domain approaches. The procedure also elucidated the cycling behaviour in terms of environmental factors. We concluded that, under appropriate circumstances of data structure, spectral analysis based on the FFT approach may be applicable for the study of oscillating diseases.

  3. Snapshot Hyperspectral Volumetric Microscopy

    NASA Astrophysics Data System (ADS)

    Wu, Jiamin; Xiong, Bo; Lin, Xing; He, Jijun; Suo, Jinli; Dai, Qionghai

    2016-04-01

    The comprehensive analysis of biological specimens brings about the demand for capturing the spatial, temporal and spectral dimensions of visual information together. However, such high-dimensional video acquisition faces major challenges in developing large data throughput and effective multiplexing techniques. Here, we report the snapshot hyperspectral volumetric microscopy that computationally reconstructs hyperspectral profiles for high-resolution volumes of ~1000 μm × 1000 μm × 500 μm at video rate by a novel four-dimensional (4D) deconvolution algorithm. We validated the proposed approach with both numerical simulations for quantitative evaluation and various real experimental results on the prototype system. Different applications such as biological component analysis in bright field and spectral unmixing of multiple fluorescence are demonstrated. The experiments on moving fluorescent beads and GFP labelled drosophila larvae indicate the great potential of our method for observing multiple fluorescent markers in dynamic specimens.

  4. Scale-free dynamics of the synchronization between sleep EEG power bands and the high frequency component of heart rate variability in normal men and patients with sleep apnea-hypopnea syndrome.

    PubMed

    Dumont, Martine; Jurysta, Fabrice; Lanquart, Jean-Pol; Noseda, André; van de Borne, Philippe; Linkowski, Paul

    2007-12-01

    To investigate the dynamics of the synchronization between heart rate variability and sleep electroencephalogram power spectra and the effect of sleep apnea-hypopnea syndrome. Heart rate and sleep electroencephalogram signals were recorded in controls and patients with sleep apnea-hypopnea syndrome that were matched for age, gender, sleep parameters, and blood pressure. Spectral analysis was applied to electrocardiogram and electroencephalogram sleep recordings to obtain power values every 20s. Synchronization likelihood was computed between time series of the normalized high frequency spectral component of RR-intervals and all electroencephalographic frequency bands. Detrended fluctuation analysis was applied to the synchronizations in order to qualify their dynamic behaviors. For all sleep bands, the fluctuations of the synchronization between sleep EEG and heart activity appear scale free and the scaling exponent is close to one as for 1/f noise. We could not detect any effect due to sleep apnea-hypopnea syndrome. The synchronizations between the high frequency component of heart rate variability and all sleep power bands exhibited robust fluctuations characterized by self-similar temporal behavior of 1/f noise type. No effects of sleep apnea-hypopnea syndrome were observed in these synchronizations. Sleep apnea-hypopnea syndrome does not affect the interdependence between the high frequency component of heart rate variability and all sleep power bands as measured by synchronization likelihood.

  5. Quantitative monitoring of sucrose, reducing sugar and total sugar dynamics for phenotyping of water-deficit stress tolerance in rice through spectroscopy and chemometrics

    NASA Astrophysics Data System (ADS)

    Das, Bappa; Sahoo, Rabi N.; Pargal, Sourabh; Krishna, Gopal; Verma, Rakesh; Chinnusamy, Viswanathan; Sehgal, Vinay K.; Gupta, Vinod K.; Dash, Sushanta K.; Swain, Padmini

    2018-03-01

    In the present investigation, the changes in sucrose, reducing and total sugar content due to water-deficit stress in rice leaves were modeled using visible, near infrared (VNIR) and shortwave infrared (SWIR) spectroscopy. The objectives of the study were to identify the best vegetation indices and suitable multivariate technique based on precise analysis of hyperspectral data (350 to 2500 nm) and sucrose, reducing sugar and total sugar content measured at different stress levels from 16 different rice genotypes. Spectral data analysis was done to identify suitable spectral indices and models for sucrose estimation. Novel spectral indices in near infrared (NIR) range viz. ratio spectral index (RSI) and normalised difference spectral indices (NDSI) sensitive to sucrose, reducing sugar and total sugar content were identified which were subsequently calibrated and validated. The RSI and NDSI models had R2 values of 0.65, 0.71 and 0.67; RPD values of 1.68, 1.95 and 1.66 for sucrose, reducing sugar and total sugar, respectively for validation dataset. Different multivariate spectral models such as artificial neural network (ANN), multivariate adaptive regression splines (MARS), multiple linear regression (MLR), partial least square regression (PLSR), random forest regression (RFR) and support vector machine regression (SVMR) were also evaluated. The best performing multivariate models for sucrose, reducing sugars and total sugars were found to be, MARS, ANN and MARS, respectively with respect to RPD values of 2.08, 2.44, and 1.93. Results indicated that VNIR and SWIR spectroscopy combined with multivariate calibration can be used as a reliable alternative to conventional methods for measurement of sucrose, reducing sugars and total sugars of rice under water-deficit stress as this technique is fast, economic, and noninvasive.

  6. Non-equilibrium quantum phase transition via entanglement decoherence dynamics.

    PubMed

    Lin, Yu-Chen; Yang, Pei-Yun; Zhang, Wei-Min

    2016-10-07

    We investigate the decoherence dynamics of continuous variable entanglement as the system-environment coupling strength varies from the weak-coupling to the strong-coupling regimes. Due to the existence of localized modes in the strong-coupling regime, the system cannot approach equilibrium with its environment, which induces a nonequilibrium quantum phase transition. We analytically solve the entanglement decoherence dynamics for an arbitrary spectral density. The nonequilibrium quantum phase transition is demonstrated as the system-environment coupling strength varies for all the Ohmic-type spectral densities. The 3-D entanglement quantum phase diagram is obtained.

  7. Leaf Aging of Amazonian Canopy Trees: Insights to Tropical Ecological Processes and Satellited Detected Canopy Dynamics

    NASA Astrophysics Data System (ADS)

    Chavana-Bryant, C.; Malhi, Y.; Gerard, F.

    2015-12-01

    Leaf aging is a fundamental driver of changes in leaf traits, thereby, regulating ecosystem processes and remotely-sensed canopy dynamics. Leaf age is particularly important for carbon-rich tropical evergreen forests, as leaf demography (leaf age distribution) has been proposed as a major driver of seasonal productivity in these forests. We explore leaf reflectance as a tool to monitor leaf age and develop a novel spectra-based (PLSR) model to predict age using data from a phenological study of 1,072 leaves from 12 lowland Amazonian canopy tree species in southern Peru. Our results demonstrate monotonic decreases in LWC and Pmass and increase in LMA with age across species; Nmass and Cmassshowed monotonic but species-specific age responses. Spectrally, we observed large age-related variation across species, with the most age-sensitive spectral domains found to be: green peak (550nm), red edge (680-750 nm), NIR (700-850 nm), and around the main water absorption features (~1450 and ~1940 nm). A spectra-based model was more accurate in predicting leaf age (R2= 0.86; %RMSE= 33) compared to trait-based models using single (R2=0.07 to 0.73; %RMSE=7 to 38) and multiple predictors (step-wise analysis; R2=0.76; %RMSE=28). Spectral and trait-based models established a physiochemical basis for the spectral age model. The relative importance of the traits modifying the leaf spectra of aging leaves was: LWC>LMA>Nmass>Pmass,&Cmass. Vegetation indices (VIs), including NDVI, EVI2, NDWI and PRI were all age-dependent. This study highlights the importance of leaf age as a mediator of leaf traits, provides evidence of age-related leaf reflectance changes that have important impacts on VIs used to monitor canopy dynamics and productivity, and proposes a new approach to predicting and monitoring leaf age with important implications for remote sensing.

  8. Spatiotemporal chaos in the dynamics of buoyantly and diffusively unstable chemical fronts

    NASA Astrophysics Data System (ADS)

    Baroni, M. P. M. A.; Guéron, E.; De Wit, A.

    2012-03-01

    Nonlinear dynamics resulting from the interplay between diffusive and buoyancy-driven Rayleigh-Taylor (RT) instabilities of autocatalytic traveling fronts are analyzed numerically for various values of the relevant parameters. These are the Rayleigh numbers of the reactant A and autocatalytic product B solutions as well as the ratio D =DB/DA between the diffusion coefficients of the two key chemical species. The interplay between the coarsening dynamics characteristic of the RT instability and the constant short wavelength modulation of the diffusive instability can lead in some regimes to complex dynamics dominated by irregular succession of birth and death of fingers. By using spectral entropy measurements, we characterize the transition between order and spatial disorder in this system. The analysis of the power spectrum and autocorrelation function, moreover, identifies similarities between the various spatial patterns. The contribution of the diffusive instability to the complex dynamics is discussed.

  9. DSOD Procedures for Seismic Hazard Analysis

    NASA Astrophysics Data System (ADS)

    Howard, J. K.; Fraser, W. A.

    2005-12-01

    DSOD, which has jurisdiction over more than 1200 dams in California, routinely evaluates their dynamic stability using seismic shaking input ranging from simple pseudostatic coefficients to spectrally matched earthquake time histories. Our seismic hazard assessments assume maximum earthquake scenarios of nearest active and conditionally active seismic sources. Multiple earthquake scenarios may be evaluated depending on sensitivity of the design analysis (e.g., to certain spectral amplitudes, duration of shaking). Active sources are defined as those with evidence of movement within the last 35,000 years. Conditionally active sources are those with reasonable expectation of activity, which are treated as active until demonstrated otherwise. The Division's Geology Branch develops seismic hazard estimates using spectral attenuation formulas applicable to California. The formulas were selected, in part, to achieve a site response model similar to the 2000 IBC's for rock, soft rock, and stiff soil sites. The level of dynamic loading used in the stability analysis (50th, 67th, or 84th percentile ground shaking estimates) is determined using a matrix that considers consequence of dam failure and fault slip rate. We account for near-source directivity amplification along such faults by adjusting target response spectra and developing appropriate design earthquakes for analysis of structures sensitive to long-period motion. Based on in-house studies, the orientation of the dam analysis section relative to the fault-normal direction is considered for strike-slip earthquakes, but directivity amplification is assumed in any orientation for dip-slip earthquakes. We do not have probabilistic standards, but we evaluate the probability of our ground shaking estimates using hazard curves constructed from the USGS Interactive De-Aggregation website. Typically, return periods for our design loads exceed 1000 years. Excessive return periods may warrant a lower design load. Minimum shaking levels are provided for sites far from active faulting. Our procedures and standards are presented at the DSOD website http://damsafety.water.ca.gov/. We review our methods and tools periodically under the guidance of our Consulting Board for Earthquake Analysis (and expect to make changes pending NGA completion), mindful that frequent procedural changes can interrupt design evaluations.

  10. Impact of the dynamical core on the direct simulation of tropical cyclones in a high-resolution global model

    DOE PAGES

    Reed, K. A.; Bacmeister, J. T.; Rosenbloom, N. A.; ...

    2015-05-13

    Our paper examines the impact of the dynamical core on the simulation of tropical cyclone (TC) frequency, distribution, and intensity. The dynamical core, the central fluid flow component of any general circulation model (GCM), is often overlooked in the analysis of a model's ability to simulate TCs compared to the impact of more commonly documented components (e.g., physical parameterizations). The Community Atmosphere Model version 5 is configured with multiple dynamics packages. This analysis demonstrates that the dynamical core has a significant impact on storm intensity and frequency, even in the presence of similar large-scale environments. In particular, the spectral elementmore » core produces stronger TCs and more hurricanes than the finite-volume core using very similar parameterization packages despite the latter having a slightly more favorable TC environment. Furthermore, these results suggest that more detailed investigations into the impact of the GCM dynamical core on TC climatology are needed to fully understand these uncertainties. Key Points The impact of the GCM dynamical core is often overlooked in TC assessments The CAM5 dynamical core has a significant impact on TC frequency and intensity A larger effort is needed to better understand this uncertainty« less

  11. A computational model for the dynamic stabilization of Rayleigh-Bénard convection in a cubic cavity.

    PubMed

    Carbo, Randy M; Smith, Robert W M; Poese, Matthew E

    2014-02-01

    The dynamic stability of Rayleigh-Bénard convection with vertical vibration in a cubic container is computationally modeled. Two parametric drives are considered (sinusoidal and rectangular), as well as two thermal boundary conditions on the sidewalls (insulating and conducting). The linearized equations are solved using a spectral Galerkin method and Floquet analysis. Both the synchronous and the subharmonic regions of instability are recovered. The conditions necessary for dynamic stability are reported for a range of Rayleigh numbers from critical to 10(7) and for Prandtl numbers in the range of 0.1-7. The linear model is compared to the data set available in the literature where the performance of an inverted pulse tube cryocooler is measured.

  12. Acceleration of Singlet Fission in an Aza-Derivative of TIPS-Pentacene.

    PubMed

    Herz, Julia; Buckup, Tiago; Paulus, Fabian; Engelhart, Jens; Bunz, Uwe H F; Motzkus, Marcus

    2014-07-17

    The influence of the carbon to nitrogen substitution on the photoinduced dynamics of TIPS-pentacene was investigated by ultrafast transient absorption measurements on spin-coated thin films in the visible and in the near-infrared spectral region. A global target analysis was performed to provide a detailed picture of the excited-state dynamics. We found that the chemical modification has a high impact on the triplet formation and leads to shorter dynamics; hence it speeds up the singlet fission process. A faster relaxation from the singlet into the triplet manifold implies a higher efficiency because other relaxation channels are avoided. The air-stable aza-derivatives have the potential to exceed the energy conversion efficiency of TIPS-pentacene.

  13. Heart rate dynamics in patients with stable angina pectoris and utility of fractal and complexity measures

    NASA Technical Reports Server (NTRS)

    Makikallio, T. H.; Ristimae, T.; Airaksinen, K. E.; Peng, C. K.; Goldberger, A. L.; Huikuri, H. V.

    1998-01-01

    Dynamic analysis techniques may uncover abnormalities in heart rate (HR) behavior that are not easily detectable with conventional statistical measures. However, the applicability of these new methods for detecting possible abnormalities in HR behavior in various cardiovascular disorders is not well established. Conventional measures of HR variability were compared with short-term (< or = 11 beats, alpha1) and long-term (> 11 beats, alpha2) fractal correlation properties and with approximate entropy of RR interval data in 38 patients with stable angina pectoris without previous myocardial infarction or cardiac medication at the time of the study and 38 age-matched healthy controls. The short- and long-term fractal scaling exponents (alpha1, alpha2) were significantly higher in the coronary patients than in the healthy controls (1.34 +/- 0.15 vs 1.11 +/- 0.12 [p <0.001] and 1.10 +/- 0.08 vs 1.04 +/- 0.06 [p <0.01], respectively), and they also had lower approximate entropy (p <0.05), standard deviation of all RR intervals (p <0.01), and high-frequency spectral component of HR variability (p <0.05). The short-term fractal scaling exponent performed better than other heart rate variability parameters in differentiating patients with coronary artery disease from healthy subjects, but it was not related to the clinical or angiographic severity of coronary artery disease or any single nonspectral or spectral measure of HR variability in this retrospective study. Patients with stable angina pectoris have altered fractal properties and reduced complexity in their RR interval dynamics relative to age-matched healthy subjects. Dynamic analysis may complement traditional analyses in detecting altered HR behavior in patients with stable angina pectoris.

  14. Adaptation to spectrally-rotated speech.

    PubMed

    Green, Tim; Rosen, Stuart; Faulkner, Andrew; Paterson, Ruth

    2013-08-01

    Much recent interest surrounds listeners' abilities to adapt to various transformations that distort speech. An extreme example is spectral rotation, in which the spectrum of low-pass filtered speech is inverted around a center frequency (2 kHz here). Spectral shape and its dynamics are completely altered, rendering speech virtually unintelligible initially. However, intonation, rhythm, and contrasts in periodicity and aperiodicity are largely unaffected. Four normal hearing adults underwent 6 h of training with spectrally-rotated speech using Continuous Discourse Tracking. They and an untrained control group completed pre- and post-training speech perception tests, for which talkers differed from the training talker. Significantly improved recognition of spectrally-rotated sentences was observed for trained, but not untrained, participants. However, there were no significant improvements in the identification of medial vowels in /bVd/ syllables or intervocalic consonants. Additional tests were performed with speech materials manipulated so as to isolate the contribution of various speech features. These showed that preserving intonational contrasts did not contribute to the comprehension of spectrally-rotated speech after training, and suggested that improvements involved adaptation to altered spectral shape and dynamics, rather than just learning to focus on speech features relatively unaffected by the transformation.

  15. Characterizing CDOM Spectral Variability Across Diverse Regions and Spectral Ranges

    NASA Astrophysics Data System (ADS)

    Grunert, Brice K.; Mouw, Colleen B.; Ciochetto, Audrey B.

    2018-01-01

    Satellite remote sensing of colored dissolved organic matter (CDOM) has focused on CDOM absorption (aCDOM) at a reference wavelength, as its magnitude provides insight into the underwater light field and large-scale biogeochemical processes. CDOM spectral slope, SCDOM, has been treated as a constant or semiconstant parameter in satellite retrievals of aCDOM despite significant regional and temporal variabilities. SCDOM and other optical metrics provide insights into CDOM composition, processing, food web dynamics, and carbon cycling. To date, much of this work relies on fluorescence techniques or aCDOM in spectral ranges unavailable to current and planned satellite sensors (e.g., <300 nm). In preparation for anticipated future hyperspectral satellite missions, we take the first step here of exploring global variability in SCDOM and fit deviations in the aCDOM spectra using the recently proposed Gaussian decomposition method. From this, we investigate if global variability in retrieved SCDOM and Gaussian components is significant and regionally distinct. We iteratively decreased the spectral range considered and analyzed the number, location, and magnitude of fitted Gaussian components to understand if a reduced spectral range impacts information obtained within a common spectral window. We compared the fitted slope from the Gaussian decomposition method to absorption-based indices that indicate CDOM composition to determine the ability of satellite-derived slope to inform the analysis and modeling of large-scale biogeochemical processes. Finally, we present implications of the observed variability for remote sensing of CDOM characteristics via SCDOM.

  16. Highly-Damped Spectral Acceleration as a Ground Motion Intensity Measure for Estimating Collapse Vulnerability of Buildings

    NASA Astrophysics Data System (ADS)

    Buyco, K.; Heaton, T. H.

    2016-12-01

    Current U.S. seismic code and performance-based design recommendations quantify ground motion intensity using 5%-damped spectral acceleration when estimating the collapse vulnerability of buildings. This intensity measure works well for predicting inter-story drift due to moderate shaking, but other measures have been shown to be better for estimating collapse risk.We propose using highly-damped (>10%) spectral acceleration to assess collapse vulnerability. As damping is increased, the spectral acceleration at a given period T begins to behave like a weighted average of the corresponding lowly-damped (i.e. 5%) spectrum at a range of periods. Weights for periods longer than T increase as damping increases. Using high damping is physically intuitive for two reasons. Firstly, ductile buildings dissipate a large amount of hysteretic energy before collapse and thus behave more like highly-damped systems. Secondly, heavily damaged buildings experience period-lengthening, giving further credence to the weighted-averaging property of highly-damped spectral acceleration.To determine the optimal damping value(s) for this ground motion intensity measure, we conduct incremental dynamic analysis for a suite of ground motions on several different mid-rise steel buildings and select the damping value yielding the lowest dispersion of intensity at the collapse threshold. Spectral acceleration calculated with damping as high as 70% has been shown to be a better indicator of collapse than that with 5% damping.

  17. Optimal network modification for spectral radius dependent phase transitions

    NASA Astrophysics Data System (ADS)

    Rosen, Yonatan; Kirsch, Lior; Louzoun, Yoram

    2016-09-01

    The dynamics of contact processes on networks is often determined by the spectral radius of the networks adjacency matrices. A decrease of the spectral radius can prevent the outbreak of an epidemic, or impact the synchronization among systems of coupled oscillators. The spectral radius is thus tightly linked to network dynamics and function. As such, finding the minimal change in network structure necessary to reach the intended spectral radius is important theoretically and practically. Given contemporary big data resources such as large scale communication or social networks, this problem should be solved with a low runtime complexity. We introduce a novel method for the minimal decrease in weights of edges required to reach a given spectral radius. The problem is formulated as a convex optimization problem, where a global optimum is guaranteed. The method can be easily adjusted to an efficient discrete removal of edges. We introduce a variant of the method which finds optimal decrease with a focus on weights of vertices. The proposed algorithm is exceptionally scalable, solving the problem for real networks of tens of millions of edges in a short time.

  18. Landsat-based trend analysis of lake dynamics across northern permafrost regions

    USGS Publications Warehouse

    Nitze, Ingmar; Grosse, Guido; Jones, Benjamin M.; Arp, Christopher D.; Ulrich, Mathias; Federov, Alexander; Veremeeva, Alexandra

    2017-01-01

    Lakes are a ubiquitous landscape feature in northern permafrost regions. They have a strong impact on carbon, energy and water fluxes and can be quite responsive to climate change. The monitoring of lake change in northern high latitudes, at a sufficiently accurate spatial and temporal resolution, is crucial for understanding the underlying processes driving lake change. To date, lake change studies in permafrost regions were based on a variety of different sources, image acquisition periods and single snapshots, and localized analysis, which hinders the comparison of different regions. Here we present, a methodology based on machine-learning based classification of robust trends of multi-spectral indices of Landsat data (TM,ETM+, OLI) and object-based lake detection, to analyze and compare the individual, local and regional lake dynamics of four different study sites (Alaska North Slope, Western Alaska, Central Yakutia, Kolyma Lowland) in the northern permafrost zone from 1999 to 2014. Regional patterns of lake area change on the Alaska North Slope (-0.69%), Western Alaska (-2.82%), and Kolyma Lowland (-0.51%) largely include increases due to thermokarst lake expansion, but more dominant lake area losses due to catastrophic lake drainage events. In contrast, Central Yakutia showed a remarkable increase in lake area of 48.48%, likely resulting from warmer and wetter climate conditions over the latter half of the study period. Within all study regions, variability in lake dynamics was associated with differences in permafrost characteristics, landscape position (i.e. upland vs. lowland), and surface geology. With the global availability of Landsat data and a consistent methodology for processing the input data derived from robust trends of multi-spectral indices, we demonstrate a transferability, scalability and consistency of lake change analysis within the northern permafrost region.

  19. Experimental characterization of the saturating, near infrared, self-amplified spontaneous emission free electron laser: Analysis of radiation properties and electron beam dynamics

    NASA Astrophysics Data System (ADS)

    Murokh, Alex

    2002-01-01

    In this work, the main results of the VISA experiment (Visible to Infrared SASE Amplifier) are presented and analyzed. The purpose of the experiment was to build a state-of-the-art single pass self-amplified spontaneous emission (SASE) free electron laser (FEL) based on a high brightness electron beam, and characterize its operation, including saturation, in the near infrared spectral region. This experiment was hosted by Accelerator Test Facility (ATF) at Brookhaven National Laboratory, which is a users facility that provides high brightness relativistic electron beams generated with the photoinjector. During the experiment, SASE FEL performance was studied in two regimes: a long bunch, lower gain operation; and a short bunch high gain regime. The transition between the two conditions was possible due to a novel bunch compression mechanism, which was discovered in the course of the experiment. This compression allowed the variation of peak current in the electron beam before it was launched into the 4-m VISA undulator. In the long bunch regime, a SASE FEL power gain length of 29 cm was obtained, and the generated radiation spectral and statistical properties were characterized. In the short bunch regime, a power gain length of under 18 cm was achieved at 842 nm, which is at least a factor of two shorter than ever previously achieved in this spectral range. Further, FEL saturation was obtained before the undulator exit. The FEL system's performance was measured along the length of the VISA undulator, and in the final state. Statistical, spectral and angular properties of the short bunch SASE radiation have been measured in the exponential gain regime, and at saturation. One of the most important aspects of the data analysis presented in this thesis was the development and use of start-to-end numerical simulations of the experiment. The dynamics of the ATF electron beam was modeled starting from the photocathode, through acceleration, transport, and inside the VISA undulator. The model allowed simulation of SASE process for different beam conditions, including the effects of the novel bunch compression mechanism on the electron beam 6-D phase space distribution. The numerical simulations displayed an excellent agreement with the experimental data, and became key to understanding complex dynamics of the SASE FEL process at VISA.

  20. Evidence for asymptotic safety from lattice quantum gravity.

    PubMed

    Laiho, J; Coumbe, D

    2011-10-14

    We calculate the spectral dimension for nonperturbative quantum gravity defined via Euclidean dynamical triangulations. We find that it runs from a value of ∼3/2 at short distance to ∼4 at large distance scales, similar to results from causal dynamical triangulations. We argue that the short-distance value of 3/2 for the spectral dimension may resolve the tension between asymptotic safety and the holographic principle.

  1. Dynamic Changes in Spectral and Spatial Signatures of High Frequency Oscillations in Rat Hippocampi during Epileptogenesis in Acute and Chronic Stages.

    PubMed

    Song, Pan-Pan; Xiang, Jing; Jiang, Li; Chen, Heng-Sheng; Liu, Ben-Ke; Hu, Yue

    2016-01-01

    To analyze spectral and spatial signatures of high frequency oscillations (HFOs), which include ripples and fast ripples (FRs, >200 Hz) by quantitatively assessing average and peak spectral power in a rat model of different stages of epileptogenesis. The lithium-pilocarpine model of temporal lobe epilepsy was used. The acute phase of epilepsy was assessed by recording intracranial electroencephalography (EEG) activity for 1 day after status epilepticus (SE). The chronic phase of epilepsy, including spontaneous recurrent seizures (SRSs), was assessed by recording EEG activity for 28 days after SE. Average and peak spectral power of five frequency bands of EEG signals in CA1, CA3, and DG regions of the hippocampus were analyzed with wavelet and digital filter. FRs occurred in the hippocampus in the animal model. Significant dynamic changes in the spectral power of FRS were identified in CA1 and CA3. The average spectral power of ripples increased at 20 min before SE ( p  < 0.05), peaked at 10 min before diazepam injection. It decreased at 10 min after diazepam ( p  < 0.05) and returned to baseline after 1 h. The average spectral power of FRs increased at 30 min before SE ( p  < 0.05) and peaked at 10 min before diazepam. It decreased at 10 min after diazepam ( p  < 0.05) and returned to baseline at 2 h after injection. The dynamic changes were similar between average and peak spectral power of FRs. Average and peak spectral power of both ripples and FRs in the chronic phase showed a gradual downward trend compared with normal rats 14 days after SE. The spectral power of HFOs may be utilized to distinguish between normal and pathologic HFOs. Ictal average and peak spectral power of FRs were two parameters for predicting acute epileptic seizures, which could be used as a new quantitative biomarker and early warning marker of seizure. Changes in interictal HFOs power in the hippocampus at the chronic stage may be not related to seizure occurrence.

  2. Molecular dynamics simulations of cis-trans isomerization for a proline-containing tripeptide in solution

    NASA Astrophysics Data System (ADS)

    Wan, Shun Zhou; Wang, Cun Xin; Xu, Ying Wu; Shi, Yun Yu

    1996-11-01

    The cis-trans isomerization of X-Pro (X is Pro or any other residue) often plays a rate-limiting role in protein folding. In order to study the dynamic properties of X-Pro in water, we have analyzed the trajectory data obtained from constrained molecular dynamics (MD) simulations of a tripeptide Phe-Pro-Ala in solution. Via calculation of autocorrelation functions and their corresponding spectral densities, we have found that the structural fluctuations of the solute are affected by the motions of various degrees of freedom, and the solvent dynamic behavior is bimodal rather than exponential or Gaussian. In addition, according to the energy and torque analysis, we suggest that both the anti/endo and the syn/endo could be the possible transition state for the cis-trans isomerization of the tripeptide.

  3. Dynamic Determination of Some Optical and Electrical Properties of Galena Natural Mineral: Potassium Ethyl Xanthate Solution Interface

    NASA Astrophysics Data System (ADS)

    Todoran, D.; Todoran, R.; Anitas, E. M.; Szakacs, Zs.

    2017-12-01

    This paper presents results concerning optical and electrical properties of galena natural mineral and of the interface layer formed between it and the potassium ethyl xanthate solution. The applied experimental method was differential optical reflectance spectroscopy over the UV-Vis/NIR spectral domain. Computations were made using the Kramers-Kronig formalism. Spectral dependencies of the electron loss functions, determined from the reflectance data obtained from the polished mineral surface, display van Hove singularities, leading to the determination of its valence band gap and electron plasma energy. Time dependent measurement of the spectral dispersion of the relative reflectance of the film formed at the interface, using the same computational formalism, leads to the dynamical determination of the spectral variation of its optical and electrical properties. We computed behaviors of the dielectric constant (dielectric permittivity), the dielectric loss function, refractive index and extinction coefficient, effective valence number and of the electron loss functions. The measurements tend to stabilize when the dynamic adsorption-desorption equilibrium is reached at the interface level.

  4. On the Chern-Gauss-Bonnet Theorem and Conformally Twisted Spectral Triples for C*-Dynamical Systems

    NASA Astrophysics Data System (ADS)

    Fathizadeh, Farzad; Gabriel, Olivier

    2016-02-01

    The analog of the Chern-Gauss-Bonnet theorem is studied for a C^*-dynamical system consisting of a C^*-algebra A equipped with an ergodic action of a compact Lie group G. The structure of the Lie algebra g of G is used to interpret the Chevalley-Eilenberg complex with coefficients in the smooth subalgebra A subset A as noncommutative differential forms on the dynamical system. We conformally perturb the standard metric, which is associated with the unique G-invariant state on A, by means of a Weyl conformal factor given by a positive invertible element of the algebra, and consider the Hermitian structure that it induces on the complex. A Hodge decomposition theorem is proved, which allows us to relate the Euler characteristic of the complex to the index properties of a Hodge-de Rham operator for the perturbed metric. This operator, which is shown to be selfadjoint, is a key ingredient in our construction of a spectral triple on A and a twisted spectral triple on its opposite algebra. The conformal invariance of the Euler characteristic is interpreted as an indication of the Chern-Gauss-Bonnet theorem in this setting. The spectral triples encoding the conformally perturbed metrics are shown to enjoy the same spectral summability properties as the unperturbed case.

  5. State and Spectral Properties of Chloride Oscillations in Pollen

    PubMed Central

    Zonia, Laura; Feijó, José A.

    2003-01-01

    Pollen tube growth is a dynamic system expressing a number of oscillating circuits. Our recent work identified a new circuit, oscillatory efflux of Cl− anion from the pollen tube apex. Cl− efflux is the first ion signal found to be coupled in phase with growth oscillations. Functional analyses indicate an active role for Cl− flux in pollen tube growth. In this report the dynamical properties of Cl− efflux are examined. Phase space analysis demonstrates that the system trajectory converges on a limit cycle. Fourier analysis reveals that two harmonic frequencies characterize normal growth. Cl− efflux is inhibited by the channel blocker DIDS, is stimulated by hypoosmotic treatment, and is antagonized by the signal encoded in inositol 3,4,5,6-tetrakisphosphate. These perturbations induce transitions of the limit cycle to new metastable states or cause system collapse to a static attractor centered near the origin. These perturbations also transform the spectral profile, inducing subharmonic frequencies, transitions to period doubling and tripling, superharmonic resonance, and chaos. These results indicate that Cl− signals in pollen tubes display features that are characteristic of active oscillators that carry frequency-encoded information. A reaction network of the Cl− oscillator coupled to two nonlinear feedback circuits that may drive pollen tube growth oscillations is considered. PMID:12547818

  6. Basaltic material in the main belt: a tale of two (or more) parent bodies?

    NASA Astrophysics Data System (ADS)

    Ieva, S.; Dotto, E.; Lazzaro, D.; Fulvio, D.; Perna, D.; Epifani, E. Mazzotta; Medeiros, H.; Fulchignoni, M.

    2018-06-01

    The majority of basaltic objects in the main belt are dynamically connected to Vesta, the largest differentiated asteroid known. Others, due to their current orbital parameters, cannot be easily dynamically linked to Vesta. This is particularly true for all the basaltic asteroids located beyond 2.5 au, where lies the 3:1 mean motion resonance with Jupiter. In order to investigate the presence of other V-type asteroids in the middle and outer main belt (MOVs) we started an observational campaign to spectroscopically characterize in the visible range MOV candidates. We observed 18 basaltic candidates from TNG and ESO - NTT between 2015 and 2016. We derived spectral parameters using the same approach adopted in our recent statistical analysis and we compared our data with orbital parameters to look for possible clusters of MOVs in the main belt, symptomatic for a new basaltic family. Our analysis seemed to point out that MOVs show different spectral parameters respect to other basaltic bodies in the main belt, which could account for a diverse mineralogy than Vesta; moreover, some of them belong to the Eos family, suggesting the possibility of another basaltic progenitor. This could have strong repercussions on the temperature gradient present in the early Solar System, and on our current understanding of differentiation processes.

  7. A method of noise reduction in heterodyne interferometric vibration metrology by combining auto-correlation analysis and spectral filtering

    NASA Astrophysics Data System (ADS)

    Hao, Hongliang; Xiao, Wen; Chen, Zonghui; Ma, Lan; Pan, Feng

    2018-01-01

    Heterodyne interferometric vibration metrology is a useful technique for dynamic displacement and velocity measurement as it can provide a synchronous full-field output signal. With the advent of cost effective, high-speed real-time signal processing systems and software, processing of the complex signals encountered in interferometry has become more feasible. However, due to the coherent nature of the laser sources, the sequence of heterodyne interferogram are corrupted by a mixture of coherent speckle and incoherent additive noise, which can severely degrade the accuracy of the demodulated signal and the optical display. In this paper, a new heterodyne interferometric demodulation method by combining auto-correlation analysis and spectral filtering is described leading to an expression for the dynamic displacement and velocity of the object under test that is significantly more accurate in both the amplitude and frequency of the vibrating waveform. We present a mathematical model of the signals obtained from interferograms that contain both vibration information of the measured objects and the noise. A simulation of the signal demodulation process is presented and used to investigate the noise from the system and external factors. The experimental results show excellent agreement with measurements from a commercial Laser Doppler Velocimetry (LDV).

  8. A Dynamical Downscaling Approach with GCM Bias Corrections and Spectral Nudging

    NASA Astrophysics Data System (ADS)

    Xu, Z.; Yang, Z.

    2013-12-01

    To reduce the biases in the regional climate downscaling simulations, a dynamical downscaling approach with GCM bias corrections and spectral nudging is developed and assessed over North America. Regional climate simulations are performed with the Weather Research and Forecasting (WRF) model embedded in the National Center for Atmospheric Research (NCAR) Community Atmosphere Model (CAM). To reduce the GCM biases, the GCM climatological means and the variances of interannual variations are adjusted based on the National Centers for Environmental Prediction-NCAR global reanalysis products (NNRP) before using them to drive WRF which is the same as our previous method. In this study, we further introduce spectral nudging to reduce the RCM-based biases. Two sets of WRF experiments are performed with and without spectral nudging. All WRF experiments are identical except that the initial and lateral boundary conditions are derived from the NNRP, the original GCM output, and the bias corrected GCM output, respectively. The GCM-driven RCM simulations with bias corrections and spectral nudging (IDDng) are compared with those without spectral nudging (IDD) and North American Regional Reanalysis (NARR) data to assess the additional reduction in RCM biases relative to the IDD approach. The results show that the spectral nudging introduces the effect of GCM bias correction into the RCM domain, thereby minimizing the climate drift resulting from the RCM biases. The GCM bias corrections and spectral nudging significantly improve the downscaled mean climate and extreme temperature simulations. Our results suggest that both GCM bias corrections or spectral nudging are necessary to reduce the error of downscaled climate. Only one of them does not guarantee better downscaling simulation. The new dynamical downscaling method can be applied to regional projection of future climate or downscaling of GCM sensitivity simulations. Annual mean RMSEs. The RMSEs are computed over the verification region by monthly mean data over 1981-2010. Experimental design

  9. Comparison of hearing and voicing ranges in singing

    NASA Astrophysics Data System (ADS)

    Hunter, Eric J.; Titze, Ingo R.

    2003-04-01

    The spectral and dynamic ranges of the human voice of professional and nonprofessional vocalists were compared to the auditory hearing and feeling thresholds at a distance of one meter. In order to compare these, an analysis was done in true dB SPL, not just relative dB as is usually done in speech analysis. The methodology of converting the recorded acoustic signal to absolute pressure units was described. The human voice range of a professional vocalist appeared to match the dynamic range of the auditory system at some frequencies. In particular, it was demonstrated that professional vocalists were able to make use of the most sensitive part of the hearing thresholds (around 4 kHz) through the use of a learned vocal ring or singer's formant. [Work sponsored by NIDCD.

  10. A Spectral Element Ocean Model on the Cray T3D: the interannual variability of the Mediterranean Sea general circulation

    NASA Astrophysics Data System (ADS)

    Molcard, A. J.; Pinardi, N.; Ansaloni, R.

    A new numerical model, SEOM (Spectral Element Ocean Model, (Iskandarani et al, 1994)), has been implemented in the Mediterranean Sea. Spectral element methods combine the geometric flexibility of finite element techniques with the rapid convergence rate of spectral schemes. The current version solves the shallow water equations with a fifth (or sixth) order accuracy spectral scheme and about 50.000 nodes. The domain decomposition philosophy makes it possible to exploit the power of parallel machines. The original MIMD master/slave version of SEOM, written in F90 and PVM, has been ported to the Cray T3D. When critical for performance, Cray specific high-performance one-sided communication routines (SHMEM) have been adopted to fully exploit the Cray T3D interprocessor network. Tests performed with highly unstructured and irregular grid, on up to 128 processors, show an almost linear scalability even with unoptimized domain decomposition techniques. Results from various case studies on the Mediterranean Sea are shown, involving realistic coastline geometry, and monthly mean 1000mb winds from the ECMWF's atmospheric model operational analysis from the period January 1987 to December 1994. The simulation results show that variability in the wind forcing considerably affect the circulation dynamics of the Mediterranean Sea.

  11. CO2 in solid para-hydrogen: spectral splitting and the CO2···(o-H2)n clusters.

    PubMed

    Du, Jun-He; Wan, Lei; Wu, Lei; Xu, Gang; Deng, Wen-Ping; Liu, An-Wen; Chen, Yang; Hu, Shui-Ming

    2011-02-17

    Complicated high-resolution spectral structures are often observed for molecules doped in solid molecular hydrogen. The structures can result from miscellaneous effects and are often interpreted differently in references. The spectrum of the ν(3) band of CO(2) in solid para-H(2) presents a model system which exhibits rich spectral structures. With the help of the potential energy simulation of the CO(2) molecule doped in para-hydrogen matrix, and extensive experiments with different CO(2) isotopologues and different ortho-hydrogen concentrations in the matrix, the spectral features observed in p-H(2) matrix are assigned to the CO(2)···(o-H(2))(n) clusters and also to energy level splitting that is due to different alignments of the doped CO(2) molecules in the matrix. The assignments are further supported by the dynamics analysis and also by the spectrum recorded with sample codoped with O(2) which serves as catalyst transferring o-H(2) to p-H(2) in the matrix at 4 K temperature. The observed spectral features of CO(2)/pH(2) can potentially be used as an alternative readout of the temperature and orthohydrogen concentration in the solid para-hydrogen.

  12. Experimental research of phase transitions in a melt of high-purity aluminum

    NASA Astrophysics Data System (ADS)

    Vorontsov, V. B.; Pershin, V. K.

    2017-12-01

    This scientific work is devoted to the studying of the genetic connection structures of solid and liquid phases. In this paper Fourier analysis of acoustic emission (AE) signals accompanying heating of high purity aluminum from the melting point up to 860 °C was performed. The experimental data allowed to follow the dynamics of disorder zones in the melt with increasing melt temperature up to their complete destruction. The presented results of spectral analysis of the signals were analyzed from the standpoint of the theory of cluster melting metals.

  13. Metric for strong intrinsic fourth-order phonon anharmonicity

    NASA Astrophysics Data System (ADS)

    Yue, Sheng-Ying; Zhang, Xiaoliang; Qin, Guangzhao; Phillpot, Simon R.; Hu, Ming

    2017-05-01

    Under the framework of Taylor series expansion for potential energy, we propose a simple and robust metric, dubbed "regular residual analysis," to measure the fourth-order phonon anharmonicity in crystals. The method is verified by studying the intrinsic strong higher-order anharmonic effects in UO2 and CeO2. Comparison of the thermal conductivity results, which calculated by the anharmonic lattice dynamics method coupled with the Boltzmann transport equation and the spectral energy density method coupled with ab initio molecular dynamics simulation further validates our analysis. Analysis of the bulk Si and Ge systems confirms that the fourth-order phonon anharmonicity is enhanced and cannot be neglected at high enough temperatures, which agrees with a previous study where the four-phonon scattering was explicitly determined. This metric will facilitate evaluating and interpreting the lattice thermal conductivity of crystals with strong fourth-order phonon anharmonicity.

  14. Principal Component Analysis in the Spectral Analysis of the Dynamic Laser Speckle Patterns

    NASA Astrophysics Data System (ADS)

    Ribeiro, K. M.; Braga, R. A., Jr.; Horgan, G. W.; Ferreira, D. D.; Safadi, T.

    2014-02-01

    Dynamic laser speckle is a phenomenon that interprets an optical patterns formed by illuminating a surface under changes with coherent light. Therefore, the dynamic change of the speckle patterns caused by biological material is known as biospeckle. Usually, these patterns of optical interference evolving in time are analyzed by graphical or numerical methods, and the analysis in frequency domain has also been an option, however involving large computational requirements which demands new approaches to filter the images in time. Principal component analysis (PCA) works with the statistical decorrelation of data and it can be used as a data filtering. In this context, the present work evaluated the PCA technique to filter in time the data from the biospeckle images aiming the reduction of time computer consuming and improving the robustness of the filtering. It was used 64 images of biospeckle in time observed in a maize seed. The images were arranged in a data matrix and statistically uncorrelated by PCA technique, and the reconstructed signals were analyzed using the routine graphical and numerical methods to analyze the biospeckle. Results showed the potential of the PCA tool in filtering the dynamic laser speckle data, with the definition of markers of principal components related to the biological phenomena and with the advantage of fast computational processing.

  15. Electric field determination in the plasma-antenna boundary of a lower-hybrid wave launcher in Tore Supra through dynamic Stark-effect spectroscopy

    DOE PAGES

    Martin, Elijah H.; Goniche, M.; Klepper, C. Christopher; ...

    2015-04-22

    Interaction of radio-frequency (RF) waves with the plasma in the near-field of a high-power wave launcher is now seen to be important, both in understanding the channeling of these waves through the plasma boundary and in avoiding power losses in the edge. In a recent Letter a direct non-intrusive measurement of a near antenna RF electric field in the range of lower hybrid (LH) frequencies (more » $$E_{LH}$$) was announced (Phys. Rev. Lett., 110:215005, 2013). The measurement was achieved through the fitting of Balmer series deuterium spectral lines utilizing a time dependent (dynamic) Stark effect model. In this article, the processing of the spectral data is discussed in detail and applied to a larger range of measurements and the accuracy and limitations of the experimental technique is investigated. We find through an analysis of numerous Tore Supra pulses that good quantitative agreement exists between the measured and full-wave modeled $$E_{LH}$$ when the launched power exceeds 0.5MW. For low power the measurement becomes formidable utilizing the implemented passive spectroscopic technique because the spectral noise overwhelms the effect of the RF electric field on the line profile. Additionally, effects of the ponderomotive force are suspected at sufficiently high power.« less

  16. Advances in numerical and applied mathematics

    NASA Technical Reports Server (NTRS)

    South, J. C., Jr. (Editor); Hussaini, M. Y. (Editor)

    1986-01-01

    This collection of papers covers some recent developments in numerical analysis and computational fluid dynamics. Some of these studies are of a fundamental nature. They address basic issues such as intermediate boundary conditions for approximate factorization schemes, existence and uniqueness of steady states for time dependent problems, and pitfalls of implicit time stepping. The other studies deal with modern numerical methods such as total variation diminishing schemes, higher order variants of vortex and particle methods, spectral multidomain techniques, and front tracking techniques. There is also a paper on adaptive grids. The fluid dynamics papers treat the classical problems of imcompressible flows in helically coiled pipes, vortex breakdown, and transonic flows.

  17. Non-equilibrium quantum phase transition via entanglement decoherence dynamics

    PubMed Central

    Lin, Yu-Chen; Yang, Pei-Yun; Zhang, Wei-Min

    2016-01-01

    We investigate the decoherence dynamics of continuous variable entanglement as the system-environment coupling strength varies from the weak-coupling to the strong-coupling regimes. Due to the existence of localized modes in the strong-coupling regime, the system cannot approach equilibrium with its environment, which induces a nonequilibrium quantum phase transition. We analytically solve the entanglement decoherence dynamics for an arbitrary spectral density. The nonequilibrium quantum phase transition is demonstrated as the system-environment coupling strength varies for all the Ohmic-type spectral densities. The 3-D entanglement quantum phase diagram is obtained. PMID:27713556

  18. Dynamic measurement of temperature, velocity, and density in hot jets using Rayleigh scattering

    NASA Astrophysics Data System (ADS)

    Mielke, Amy F.; Elam, Kristie A.

    2009-10-01

    A molecular Rayleigh scattering technique is utilized to measure gas temperature, velocity, and density in unseeded gas flows at sampling rates up to 10 kHz, providing fluctuation information up to 5 kHz based on the Nyquist theorem. A high-power continuous-wave laser beam is focused at a point in an air flow field and Rayleigh scattered light is collected and fiber-optically transmitted to a Fabry-Perot interferometer for spectral analysis. Photomultiplier tubes operated in the photon counting mode allow high-frequency sampling of the total signal level and the circular interference pattern to provide dynamic density, temperature, and velocity measurements. Mean and root mean square velocity, temperature, and density, as well as power spectral density calculations, are presented for measurements in a hydrogen-combustor heated jet facility with a 50.8-mm diameter nozzle at NASA John H. Glenn Research Center at Lewis Field. The Rayleigh measurements are compared with particle image velocimetry data and computational fluid dynamics predictions. This technique is aimed at aeronautics research related to identifying noise sources in free jets, as well as applications in supersonic and hypersonic flows where measurement of flow properties, including mass flux, is required in the presence of shocks and ionization occurrence.

  19. Impact of initial pulse shape on the nonlinear spectral compression in optical fibre

    NASA Astrophysics Data System (ADS)

    Boscolo, Sonia; Chaussard, Frederic; Andresen, Esben; Rigneault, Hervé; Finot, Christophe

    2018-02-01

    We theoretically study the effects of the temporal intensity profile of the initial pulse on the nonlinear propagation spectral compression process arising from nonlinear propagation in an optical fibre. Various linearly chirped input pulse profiles are considered, and their dynamics is explained with the aid of time-frequency representations. While initially parabolic-shaped pulses show enhanced spectral compression compared to Gaussian pulses, no significant spectral narrowing occurs when initially super-Gaussian pulses are used. Triangular pulses lead to a spectral interference phenomenon similar to the Fresnel bi-prism experiment.

  20. Hyperspectral remote sensing exploration of carbonatite - an example from Epembe, Kunene region, Namibia

    NASA Astrophysics Data System (ADS)

    Zimmermann, Robert; Brandmeier, Melanie; Andreani, Louis; Gloaguen, Richard

    2015-04-01

    Remote sensing data can provide valuable information about ore deposits and their alteration zones at surface level. High spectral and spatial resolution of the data is essential for detailed mapping of mineral abundances and related structures. Carbonatites are well known for hosting economic enrichments in REE, Ta, Nb and P (Jones et al. 2013). These make them a preferential target for exploration for those critical elements. In this study we show how combining geomorphic, textural and spectral data improves classification result. We selected a site with a well-known occurrence in northern Namibia: the Epembe dyke. For analysis LANDSAT 8, SRTM and airborne hyperspectral (HyMap) data were chosen. The overlapping data allows a multi-scale and multi-resolution approach. Results from data analysis were validated during fieldwork in 2014. Data was corrected for atmospherical and geometrical effects. Image classification, mineral mapping and tectonic geomorphology allow a refinement of the geological map by lithological mapping in a second step. Detailed mineral abundance maps were computed using spectral unmixing techniques. These techniques are well suited to map abundances of carbonate minerals, but not to discriminate the carbonatite itself from surrounding rocks with similar spectral signatures. Thus, geometric indices were calculated using tectonic geomorphology and textures. For this purpose the TecDEM-toolbox (SHAHZAD & GLOAGUEN 2011) was applied to the SRTM-data for geomorphic analysis. Textural indices (e.g. uniformity, entropy, angular second moment) were derived from HyMap and SRTM by a grey-level co-occurrence matrix (CLAUSI 2002). The carbonatite in the study area is ridge-forming and shows a narrow linear feature in the textural bands. Spectral and geometric information were combined using kohonen Self-Organizing Maps (SOM) for unsupervised clustering. The resulting class spectra were visually compared and interpreted. Classes with similar signatures were merged according to geological context. The major conclusions are: 1. Carbonate minerals can be mapped using spectral unmixing techniques. 2. Carbonatites are associated with specific geometric pattern 3. The combination of spectral and geometric information improves classification result and reduces misclassification. References Clausi, D. A. (2002): An analysis of co-occurrence texture statistics as a function of grey-level quantization. - Canadian Journal of Remote Sensing, 28 (1), 45-62 Jones, A. P., Genge, M. and Carmody, L (2013): Carbonate Melts and Carbonatites. - Reviews in Mineralogy & Geochemistry, 75, 289-322 Shahzad, F. & Gloaguen, R. (2011): TecDEM: A MATLAB based toolbox for tectonic geomorphology, Part 2: Surface dynamics and basin analysis. - Computers and Geosciences, 37 (2), 261-271

  1. Detecting presence of live and dead pathogenic organisms in water and the water solutions by laser spectroscopy

    NASA Astrophysics Data System (ADS)

    Moguilnaya, T.; Suminov, I.; Ignatov, S.

    2017-05-01

    Presented is a new method for the recognition of live or dead pathogens in water. This method is based on the diagnostics of non-linear effects that comprise two phenomena: an induced luminescence of DNA under the influence of laser radiation, and a stimulated Brillouin scattering (SBS). The following model parameters were selected for the identification: the peak positions of spectral lines corresponding to pathogens and the difference between two wavelengths corresponding, respectively, to a laser mode maximum, and to a peak of the spectral line of a pathogen. A large volume of experimental data has been obtained and statistical analysis using Student’s test was carried out in order to determine the probability of the detection of spectra. The dynamics of the spectra of direct dispersion have been studied for a number of bacteria. Based on these results, the method and the device were developed. That device was tested in a water pipe line. In addition, we have studied the dynamics of changes in the spectra for solutions containing live bacteria and dead cells.

  2. Entropy information of heart rate variability and its power spectrum during day and night

    NASA Astrophysics Data System (ADS)

    Jin, Li; Jun, Wang

    2013-07-01

    Physiologic systems generate complex fluctuations in their output signals that reflect the underlying dynamics. We employed the base-scale entropy method and the power spectral analysis to study the 24 hours heart rate variability (HRV) signals. The results show that such profound circadian-, age- and pathologic-dependent changes are accompanied by changes in base-scale entropy and power spectral distribution. Moreover, the base-scale entropy changes reflect the corresponding changes in the autonomic nerve outflow. With the suppression of the vagal tone and dominance of the sympathetic tone in congestive heart failure (CHF) subjects, there is more variability in the date fluctuation mode. So the higher base-scale entropy belongs to CHF subjects. With the decrease of the sympathetic tone and the respiratory frequency (RSA) becoming more pronounced with slower breathing during sleeping, the base-scale entropy drops in CHF subjects. The HRV series of the two healthy groups have the same diurnal/nocturnal trend as the CHF series. The fluctuation dynamics trend of data in the three groups can be described as “HF effect”.

  3. CO{sub 2} isolated line shapes by classical molecular dynamics simulations: Influence of the intermolecular potential and comparison with new measurements

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Larcher, G.; Tran, H., E-mail: ha.tran@lisa.u-pec.fr; Schwell, M.

    2014-02-28

    Room temperature absorption spectra of various transitions of pure CO{sub 2} have been measured in a broad pressure range using a tunable diode-laser and a cavity ring-down spectrometer, respectively, in the 1.6 μm and 0.8 μm regions. Their spectral shapes have been calculated by requantized classical molecular dynamics simulations. From the time-dependent auto-correlation function of the molecular dipole, including Doppler and collisional effects, spectral shapes are directly computed without the use of any adjusted parameter. Analysis of the spectra calculated using three different anisotropic intermolecular potentials shows that the shapes of pure CO{sub 2} lines, in terms of both themore » Lorentz widths and non-Voigt effects, slightly depend on the used potential. Comparisons between these ab initio calculations and the measured spectra show satisfactory agreement for all considered transitions (from J = 6 to J = 46). They also show that non-Voigt effects on the shape of CO{sub 2} transitions are almost independent of the rotational quantum number of the considered lines.« less

  4. Image velocimetry and spectral analysis enable quantitative characterization of larval zebrafish gut motility.

    PubMed

    Ganz, J; Baker, R P; Hamilton, M K; Melancon, E; Diba, P; Eisen, J S; Parthasarathy, R

    2018-05-02

    Normal gut function requires rhythmic and coordinated movements that are affected by developmental processes, physical and chemical stimuli, and many debilitating diseases. The imaging and characterization of gut motility, especially regarding periodic, propagative contractions driving material transport, are therefore critical goals. Previous image analysis approaches have successfully extracted properties related to the temporal frequency of motility modes, but robust measures of contraction magnitude, especially from in vivo image data, remain challenging to obtain. We developed a new image analysis method based on image velocimetry and spectral analysis that reveals temporal characteristics such as frequency and wave propagation speed, while also providing quantitative measures of the amplitude of gut motion. We validate this approach using several challenges to larval zebrafish, imaged with differential interference contrast microscopy. Both acetylcholine exposure and feeding increase frequency and amplitude of motility. Larvae lacking enteric nervous system gut innervation show the same average motility frequency, but reduced and less variable amplitude compared to wild types. Our image analysis approach enables insights into gut dynamics in a wide variety of developmental and physiological contexts and can also be extended to analyze other types of cell movements. © 2018 John Wiley & Sons Ltd.

  5. High Dynamic Range Spectral Imaging Pipeline For Multispectral Filter Array Cameras.

    PubMed

    Lapray, Pierre-Jean; Thomas, Jean-Baptiste; Gouton, Pierre

    2017-06-03

    Spectral filter arrays imaging exhibits a strong similarity with color filter arrays. This permits us to embed this technology in practical vision systems with little adaptation of the existing solutions. In this communication, we define an imaging pipeline that permits high dynamic range (HDR)-spectral imaging, which is extended from color filter arrays. We propose an implementation of this pipeline on a prototype sensor and evaluate the quality of our implementation results on real data with objective metrics and visual examples. We demonstrate that we reduce noise, and, in particular we solve the problem of noise generated by the lack of energy balance. Data are provided to the community in an image database for further research.

  6. Theoretical modeling of magnesium ion imprints in the Raman scattering of water.

    PubMed

    Kapitán, Josef; Dracínský, Martin; Kaminský, Jakub; Benda, Ladislav; Bour, Petr

    2010-03-18

    Hydration envelopes of metallic ions significantly influence their chemical properties and biological functioning. Previous computational studies, nuclear magnetic resonance (NMR), and vibrational spectra indicated a strong affinity of the Mg(2+) cation to water. We find it interesting that, although monatomic ions do not vibrate themselves, they cause notable changes in the water Raman signal. Therefore, in this study, we used a combination of Raman spectroscopy and computer modeling to analyze the magnesium hydration shell and origin of the signal. In the measured spectra of several salts (LiCl, NaCl, KCl, MgCl(2), CaCl(2), MgBr(2), and MgI(2) water solutions), only the spectroscopic imprint of the hydrated Mg(2+) cation could clearly be identified as an exceptionally distinct peak at approximately 355 cm(-1). The assignment of this band to the Mg-O stretching motion could be confirmed on the basis of several models involving quantum chemical computations on metal/water clusters. Minor Raman spectral features could also be explained. Ab initio and Fourier transform (FT) techniques coupled with the Car-Parrinello molecular dynamics were adapted to provide the spectra from dynamical trajectories. The results suggest that even in concentrated solutions magnesium preferentially forms a [Mg(H(2)O)(6)](2+) complex of a nearly octahedral symmetry; nevertheless, the Raman signal is primarily associated with the relatively strong metal-H(2)O bond. Partially covalent character of the Mg-O bond was confirmed by a natural bond orbital analysis. Computations on hydrated chlorine anion did not provide a specific signal. The FT techniques gave good spectral profiles in the high-frequency region, whereas the lowest-wavenumber vibrations were better reproduced by the cluster models. Both dynamical and cluster computational models provided a useful link between spectral shapes and specific ion-water interactions.

  7. Asymptotic Time Decay in Quantum Physics: a Selective Review and Some New Results

    NASA Astrophysics Data System (ADS)

    Marchetti, Domingos H. U.; Wreszinski, Walter F.

    2013-05-01

    Decay of various quantities (return or survival probability, correlation functions) in time are the basis of a multitude of important and interesting phenomena in quantum physics, ranging from spectral properties, resonances, return and approach to equilibrium, to dynamical stability properties and irreversibility and the "arrow of time" in [Asymptotic Time Decay in Quantum Physics (World Scientific, 2013)]. In this review, we study several types of decay — decay in the average, decay in the Lp-sense, and pointwise decay — of the Fourier-Stieltjes transform of a measure, usually identified with the spectral measure, which appear naturally in different mathematical and physical settings. In particular, decay in the Lp-sense is related both to pointwise decay and to decay in the average and, from a physical standpoint, relates to a rigorous form of the time-energy uncertainty relation. Both decay on the average and in the Lp-sense are related to spectral properties, in particular, absolute continuity of the spectral measure. The study of pointwise decay for singular continuous measures (Rajchman measures) provides a bridge between ergodic theory, number theory and analysis, including the method of stationary phase. The theory is illustrated by some new results in the theory of sparse models.

  8. Inclusion of TCAF model in XSPEC to study accretion flow dynamics around black hole candidates

    NASA Astrophysics Data System (ADS)

    Debnath, Dipak; Chakrabarti, Sandip Kumar; Mondal, Santanu

    Spectral and Temporal properties of black hole candidates can be well understood with the Chakrabarti-Titarchuk solution of two component advective flow (TCAF). This model requires two accretion rates, namely, the Keplerian disk accretion rate and the sub-Keplerian halo accretion rate, the latter being composed of a low angular momentum flow which may or may not develop a shock. In this solution, the relevant parameter is the relative importance of the halo (which creates the Compton cloud region) rate with respect to the Keplerian disk rate (soft photon source). Though this model has been used earlier to manually fit data of several black hole candidates quite satisfactorily, for the first time we are able to create a user friendly version by implementing additive Table model FITS file into GSFC/NASA's spectral analysis software package XSPEC. This enables any user to extract physical parameters of accretion flows, such as two accretion rates, shock location, shock strength etc. for any black hole candidate. Most importantly, unlike any other theoretical model, we show that TCAF is capable of predicting timing properties from spectral fits, since in TCAF, a shock is responsible for deciding spectral slopes as well as QPO frequencies.

  9. Water of Hydration Dynamics in Minerals Gypsum and Bassanite: Ultrafast 2D IR Spectroscopy of Rocks.

    PubMed

    Yan, Chang; Nishida, Jun; Yuan, Rongfeng; Fayer, Michael D

    2016-08-03

    Water of hydration plays an important role in minerals, determining their crystal structures and physical properties. Here ultrafast nonlinear infrared (IR) techniques, two-dimensional infrared (2D IR) and polarization selective pump-probe (PSPP) spectroscopies, were used to measure the dynamics and disorder of water of hydration in two minerals, gypsum (CaSO4·2H2O) and bassanite (CaSO4·0.5H2O). 2D IR spectra revealed that water arrangement in freshly precipitated gypsum contained a small amount of inhomogeneity. Following annealing at 348 K, water molecules became highly ordered; the 2D IR spectrum became homogeneously broadened (motional narrowed). PSPP measurements observed only inertial orientational relaxation. In contrast, water in bassanite's tubular channels is dynamically disordered. 2D IR spectra showed a significant amount of inhomogeneous broadening caused by a range of water configurations. At 298 K, water dynamics cause spectral diffusion that sampled a portion of the inhomogeneous line width on the time scale of ∼30 ps, while the rest of inhomogeneity is static on the time scale of the measurements. At higher temperature, the dynamics become faster. Spectral diffusion accelerates, and a portion of the lower temperature spectral diffusion became motionally narrowed. At sufficiently high temperature, all of the dynamics that produced spectral diffusion at lower temperatures became motionally narrowed, and only homogeneous broadening and static inhomogeneity were observed. Water angular motions in bassanite exhibit temperature-dependent diffusive orientational relaxation in a restricted cone of angles. The experiments were made possible by eliminating the vast amount of scattered light produced by the granulated powder samples using phase cycling methods.

  10. A new approach for the calculation of response spectral density of a linear stationary random multidegree of freedom system

    NASA Astrophysics Data System (ADS)

    Sharan, A. M.; Sankar, S.; Sankar, T. S.

    1982-08-01

    A new approach for the calculation of response spectral density for a linear stationary random multidegree of freedom system is presented. The method is based on modifying the stochastic dynamic equations of the system by using a set of auxiliary variables. The response spectral density matrix obtained by using this new approach contains the spectral densities and the cross-spectral densities of the system generalized displacements and velocities. The new method requires significantly less computation time as compared to the conventional method for calculating response spectral densities. Two numerical examples are presented to compare quantitatively the computation time.

  11. Tracking plant physiological properties from multi-angular tower-based remote sensing.

    PubMed

    Hilker, Thomas; Gitelson, Anatoly; Coops, Nicholas C; Hall, Forrest G; Black, T Andrew

    2011-04-01

    Imaging spectroscopy is a powerful technique for monitoring the biochemical constituents of vegetation and is critical for understanding the fluxes of carbon and water between the land surface and the atmosphere. However, spectral observations are subject to the sun-observer geometry and canopy structure which impose confounding effects on spectral estimates of leaf pigments. For instance, the sun-observer geometry influences the spectral brightness measured by the sensor. Likewise, when considering pigment distribution at the stand level scale, the pigment content observed from single view angles may not necessarily be representative of stand-level conditions as some constituents vary as a function of the degree of leaf illumination and are therefore not isotropic. As an alternative to mono-angle observations, multi-angular remote sensing can describe the anisotropy of surface reflectance and yield accurate information on canopy structure. These observations can also be used to describe the bi-directional reflectance distribution which then allows the modeling of reflectance independently of the observation geometry. In this paper, we demonstrate a method for estimating pigment contents of chlorophyll and carotenoids continuously over a year from tower-based, multi-angular spectro-radiometer observations. Estimates of chlorophyll and carotenoid content were derived at two flux-tower sites in western Canada. Pigment contents derived from inversion of a CR model (PROSAIL) compared well to those estimated using a semi-analytical approach (r(2) = 0.90 and r(2) = 0.69, P < 0.05 for both sites, respectively). Analysis of the seasonal dynamics indicated that net ecosystem productivity was strongly related to total canopy chlorophyll content at the deciduous site (r(2) = 0.70, P < 0.001), but not at the coniferous site. Similarly, spectral estimates of photosynthetic light-use efficiency showed strong seasonal patterns in the deciduous stand, but not in conifers. We conclude that multi-angular, spectral observations can play a key role in explaining seasonal dynamics of fluxes of carbon and water and provide a valuable addition to flux-tower-based networks.

  12. Very High Spectral Resolution Imaging Spectroscopy: the Fluorescence Explorer (FLEX) Mission

    NASA Technical Reports Server (NTRS)

    Moreno, Jose F.; Goulas, Yves; Huth, Andreas; Middleton, Elizabeth; Miglietta, Franco; Mohammed, Gina; Nedbal, Ladislav; Rascher, Uwe; Verhoef, Wouter; Drusch, Matthias

    2016-01-01

    The Fluorescence Explorer (FLEX) mission has been recently selected as the 8th Earth Explorer by the European Space Agency (ESA). It will be the first mission specifically designed to measure from space vegetation fluorescence emission, by making use of very high spectral resolution imaging spectroscopy techniques. Vegetation fluorescence is the best proxy to actual vegetation photosynthesis which can be measurable from space, allowing an improved quantification of vegetation carbon assimilation and vegetation stress conditions, thus having key relevance for global mapping of ecosystems dynamics and aspects related with agricultural production and food security. The FLEX mission carries the FLORIS spectrometer, with a spectral resolution in the range of 0.3 nm, and is designed to fly in tandem with Copernicus Sentinel-3, in order to provide all the necessary spectral / angular information to disentangle emitted fluorescence from reflected radiance, and to allow proper interpretation of the observed fluorescence spatial and temporal dynamics.

  13. Open Systems with Error Bounds: Spin-Boson Model with Spectral Density Variations.

    PubMed

    Mascherpa, F; Smirne, A; Huelga, S F; Plenio, M B

    2017-03-10

    In the study of open quantum systems, one of the most common ways to describe environmental effects on the reduced dynamics is through the spectral density. However, in many models this object cannot be computed from first principles and needs to be inferred on phenomenological grounds or fitted to experimental data. Consequently, some uncertainty regarding its form and parameters is unavoidable; this in turn calls into question the accuracy of any theoretical predictions based on a given spectral density. Here, we focus on the spin-boson model as a prototypical open quantum system, find two error bounds on predicted expectation values in terms of the spectral density variation considered, and state a sufficient condition for the strongest one to apply. We further demonstrate an application of our result, by bounding the error brought about by the approximations involved in the hierarchical equations of motion resolution method for spin-boson dynamics.

  14. Nonlocal Coulomb correlations in pure and electron-doped Sr2IrO4 : Spectral functions, Fermi surface, and pseudo-gap-like spectral weight distributions from oriented cluster dynamical mean-field theory

    NASA Astrophysics Data System (ADS)

    Martins, Cyril; Lenz, Benjamin; Perfetti, Luca; Brouet, Veronique; Bertran, François; Biermann, Silke

    2018-03-01

    We address the role of nonlocal Coulomb correlations and short-range magnetic fluctuations in the high-temperature phase of Sr2IrO4 within state-of-the-art spectroscopic and first-principles theoretical methods. Introducing an "oriented-cluster dynamical mean-field scheme", we compute momentum-resolved spectral functions, which we find to be in excellent agreement with angle-resolved photoemission spectra. We show that while short-range antiferromagnetic fluctuations are crucial to accounting for the electronic properties of Sr2IrO4 even in the high-temperature paramagnetic phase, long-range magnetic order is not a necessary ingredient of the insulating state. Upon doping, an exotic metallic state is generated, exhibiting cuprate-like pseudo-gap spectral properties, for which we propose a surprisingly simple theoretical mechanism.

  15. Model-Based Speech Signal Coding Using Optimized Temporal Decomposition for Storage and Broadcasting Applications

    NASA Astrophysics Data System (ADS)

    Athaudage, Chandranath R. N.; Bradley, Alan B.; Lech, Margaret

    2003-12-01

    A dynamic programming-based optimization strategy for a temporal decomposition (TD) model of speech and its application to low-rate speech coding in storage and broadcasting is presented. In previous work with the spectral stability-based event localizing (SBEL) TD algorithm, the event localization was performed based on a spectral stability criterion. Although this approach gave reasonably good results, there was no assurance on the optimality of the event locations. In the present work, we have optimized the event localizing task using a dynamic programming-based optimization strategy. Simulation results show that an improved TD model accuracy can be achieved. A methodology of incorporating the optimized TD algorithm within the standard MELP speech coder for the efficient compression of speech spectral information is also presented. The performance evaluation results revealed that the proposed speech coding scheme achieves 50%-60% compression of speech spectral information with negligible degradation in the decoded speech quality.

  16. Intermediate scale plasma density irregularities in the polar ionosphere inferred from radio occultation

    NASA Astrophysics Data System (ADS)

    Shume, E. B.; Komjathy, A.; Langley, R. B.; Verkhoglyadova, O. P.; Butala, M.; Mannucci, A. J.

    2014-12-01

    In this research, we report intermediate scale plasma density irregularities in the high-latitude ionosphere inferred from high-resolution radio occultation (RO) measurements in the CASSIOPE (CAScade Smallsat and IOnospheric Polar Explorer) - GPS (Global Positioning System) satellites radio link. The high inclination of the CASSIOPE satellite and high rate of signal receptionby the occultation antenna of the GPS Attitude, Positioning and Profiling (GAP) instrument on the Enhanced Polar Outflow Probe platform on CASSIOPE enable a high temporal and spatial resolution investigation of the dynamics of the polar ionosphere, magnetosphere-ionospherecoupling, solar wind effects, etc. with unprecedented details compared to that possible in the past. We have carried out high spatial resolution analysis in altitude and geomagnetic latitude of scintillation-producing plasma density irregularities in the polar ionosphere. Intermediate scale, scintillation-producing plasma density irregularities, which corresponds to 2 to 40 km spatial scales were inferred by applying multi-scale spectral analysis on the RO phase delay measurements. Using our multi-scale spectral analysis approach and Polar Operational Environmental Satellites (POES) and Defense Meteorological Satellite Program (DMSP) observations, we infer that the irregularity scales and phase scintillations have distinct features in the auroral oval and polar cap regions. In specific terms, we found that large length scales and and more intense phase scintillations are prevalent in the auroral oval compared to the polar cap region. Hence, the irregularity scales and phase scintillation characteristics are a function of the solar wind and the magnetospheric forcing. Multi-scale analysis may become a powerful diagnostic tool for characterizing how the ionosphere is dynamically driven by these factors.

  17. Quantum signature of chaos and thermalization in the kicked Dicke model

    NASA Astrophysics Data System (ADS)

    Ray, S.; Ghosh, A.; Sinha, S.

    2016-09-01

    We study the quantum dynamics of the kicked Dicke model (KDM) in terms of the Floquet operator, and we analyze the connection between chaos and thermalization in this context. The Hamiltonian map is constructed by suitably taking the classical limit of the Heisenberg equation of motion to study the corresponding phase-space dynamics, which shows a crossover from regular to chaotic motion by tuning the kicking strength. The fixed-point analysis and calculation of the Lyapunov exponent (LE) provide us with a complete picture of the onset of chaos in phase-space dynamics. We carry out a spectral analysis of the Floquet operator, which includes a calculation of the quasienergy spacing distribution and structural entropy to show the correspondence to the random matrix theory in the chaotic regime. Finally, we analyze the thermodynamics and statistical properties of the bosonic sector as well as the spin sector, and we discuss how such a periodically kicked system relaxes to a thermalized state in accordance with the laws of statistical mechanics.

  18. Quantum signature of chaos and thermalization in the kicked Dicke model.

    PubMed

    Ray, S; Ghosh, A; Sinha, S

    2016-09-01

    We study the quantum dynamics of the kicked Dicke model (KDM) in terms of the Floquet operator, and we analyze the connection between chaos and thermalization in this context. The Hamiltonian map is constructed by suitably taking the classical limit of the Heisenberg equation of motion to study the corresponding phase-space dynamics, which shows a crossover from regular to chaotic motion by tuning the kicking strength. The fixed-point analysis and calculation of the Lyapunov exponent (LE) provide us with a complete picture of the onset of chaos in phase-space dynamics. We carry out a spectral analysis of the Floquet operator, which includes a calculation of the quasienergy spacing distribution and structural entropy to show the correspondence to the random matrix theory in the chaotic regime. Finally, we analyze the thermodynamics and statistical properties of the bosonic sector as well as the spin sector, and we discuss how such a periodically kicked system relaxes to a thermalized state in accordance with the laws of statistical mechanics.

  19. Evidence of Mixed-mode oscillations and Farey arithmetic in double plasma system in presence of fireball

    NASA Astrophysics Data System (ADS)

    Mitra, Vramori; Sarma, Bornali; Sarma, Arun

    2017-10-01

    Plasma fireballs are luminous glowing region formed around a positively biased electrode. The present work reports the observation of mix mode oscillation (MMO) in the dynamics of plasma oscillations that are excited in the presence of fireball in a double plasma device. Source voltage and applied electrode voltage are considered as the controlling parameters for the experiment. Many sequences of distinct multi peaked periodic states reflects the presence of MMO with the variation of control parameter. The sequences of states with two patterns are characterized well by Farey arithmetic, which provides rational approximations of irrational numbers. These states can be characterized by a firing number, the ratio of the number of small amplitude oscillations to the total number of oscillations per period. The dynamical transition in plasma fireball is also demonstrated by spectral analysis, recurrence quantification analysis (RQA) and by statistical measures viz., skewness and kurtosis. The mix mode phenomenon observed in the experiment is consistent with a model that describes the dynamics of ionization instabilities.

  20. Single-organelle tracking by two-photon conversion

    NASA Astrophysics Data System (ADS)

    Watanabe, Wataru; Shimada, Tomoko; Matsunaga, Sachihiro; Kurihara, Daisuke; Fukui, Kiichi; Shin-Ichi Arimura, Shin-Ichi; Tsutsumi, Nobuhiro; Isobe, Keisuke; Itoh, Kazuyoshi

    2007-03-01

    Spatial and temporal information about intracellular objects and their dynamics within a living cell are essential for dynamic analysis of such objects in cell biology. A specific intracellular object can be discriminated by photoactivatable fluorescent proteins that exhibit pronounced light-induced spectral changes. Here, we report on selective labeling and tracking of a single organelle by using two-photon conversion of a photoconvertible fluorescent protein with near-infrared femtosecond laser pulses. We performed selective labeling of a single mitochondrion in a living tobacco BY-2 cell using two-photon photoconversion of Kaede. Using this technique, we demonstrated that, in plants, the directed movement of individual mitochondria along the cytoskeletons was mediated by actin filaments, whereas microtubules were not required for the movement of mitochondria. This single-organelle labeling technique enabled us to track the dynamics of a single organelle, revealing the mechanisms involved in organelle dynamics. The technique has potential application in direct tracking of selective cellular and intracellular structures.

  1. Dynamic Temperature and Pressure Measurements in the Core of a Propulsion Engine

    NASA Technical Reports Server (NTRS)

    Schuster, Bill; Gordon, Grant; Hultgren, Lennart S.

    2015-01-01

    Dynamic temperature and pressure measurements were made in the core of a TECH977 propulsion engine as part of a NASA funded investigation into indirect combustion noise. Dynamic temperature measurements were made in the combustor, the inter-turbine duct, and the mixer using ten two-wire thermocouple probes. Internal dynamic pressure measurements were made at the same locations using piezoresistive transducers installed in semi-infinite coils. Measurements were acquired at four steady state operating conditions covering the range of aircraft approach power settings. Fluctuating gas temperature spectra were computed from the thermocouple probe voltage measurements using a compensation procedure that was developed under previous NASA test programs. A database of simultaneously acquired dynamic temperature and dynamic pressure measurements was produced. Spectral and cross-spectral analyses were conducted to explore the characteristics of the temperature and pressure fluctuations inside the engine, with a particular focus on attempting to identify the presence of indirect combustion noise.

  2. Spectral methods for partial differential equations

    NASA Technical Reports Server (NTRS)

    Hussaini, M. Y.; Streett, C. L.; Zang, T. A.

    1983-01-01

    Origins of spectral methods, especially their relation to the Method of Weighted Residuals, are surveyed. Basic Fourier, Chebyshev, and Legendre spectral concepts are reviewed, and demonstrated through application to simple model problems. Both collocation and tau methods are considered. These techniques are then applied to a number of difficult, nonlinear problems of hyperbolic, parabolic, elliptic, and mixed type. Fluid dynamical applications are emphasized.

  3. Scaled accelerographs for design of structures in Quetta, Baluchistan, Pakistan

    NASA Astrophysics Data System (ADS)

    Bhatti, Abdul Qadir

    2016-12-01

    Structural design for seismic excitation is usually based on peak values of forces and deformations over the duration of earthquake. In determining these peak values dynamic analysis is done which requires either response history analysis (RHA), also called time history analysis, or response spectrum analysis (RSA), both of which depend upon ground motion severity. In the past, PGA has been used to describe ground motion severity, because seismic force on a rigid body is proportional to the ground acceleration. However, it has been pointed out that single highest peak on accelerograms is a very unreliable description of the accelerograms as a whole. In this study, we are considering 0.2- and 1-s spectral acceleration. Seismic loading has been defined in terms of design spectrum and time history which will lead us to two methods of dynamic analysis. Design spectrum for Quetta will be constructed incorporating the parameters of ASCE 7-05/IBC 2006/2009, which is being used by modern codes and regulation of the world like IBC 2006/2009, ASCE 7-05, ATC-40, FEMA-356 and others. A suite of time history representing design earthquake will also be prepared, this will be a helpful tool to carryout time history dynamic analysis of structures in Quetta.

  4. Signal Detection Techniques for Diagnostic Monitoring of Space Shuttle Main Engine Turbomachinery

    NASA Technical Reports Server (NTRS)

    Coffin, Thomas; Jong, Jen-Yi

    1986-01-01

    An investigation to develop, implement, and evaluate signal analysis techniques for the detection and classification of incipient mechanical failures in turbomachinery is reviewed. A brief description of the Space Shuttle Main Engine (SSME) test/measurement program is presented. Signal analysis techniques available to describe dynamic measurement characteristics are reviewed. Time domain and spectral methods are described, and statistical classification in terms of moments is discussed. Several of these waveform analysis techniques have been implemented on a computer and applied to dynamc signals. A laboratory evaluation of the methods with respect to signal detection capability is described. A unique coherence function (the hyper-coherence) was developed through the course of this investigation, which appears promising as a diagnostic tool. This technique and several other non-linear methods of signal analysis are presented and illustrated by application. Software for application of these techniques has been installed on the signal processing system at the NASA/MSFC Systems Dynamics Laboratory.

  5. ACCRETION FLOW DYNAMICS OF MAXI J1836-194 DURING ITS 2011 OUTBURST FROM TCAF SOLUTION

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jana, Arghajit; Debnath, Dipak; Chakrabarti, Sandip K.

    2016-03-20

    The Galactic transient X-ray binary MAXI J1836-194 was discovered on 2011 August 29. Here we make a detailed study of the spectral and timing properties of its 2011 outburst using archival data from the RXTE Proportional Counter Array instrument. The evolution of accretion flow dynamics of the source during the outburst through spectral analysis with Chakrabarti–Titarchuk’s two-component advective flow (TCAF) solution as a local table model in XSPEC. We also fitted spectra with combined disk blackbody and power-law models and compared it with the TCAF model fitted results. The source is found to be in hard and hard-intermediate spectral states onlymore » during the entire phase of this outburst. No soft or soft-intermediate spectral states are observed. This could be due to the fact that this object belongs to a special class of sources (e.g., MAXI J1659-152, Swift J1753.5-0127, etc.) that have very short orbital periods and that the companion is profusely mass-losing or the disk is immersed inside an excretion disk. In these cases, flows in the accretion disk are primarily dominated by low viscous sub-Keplerian flow and the Keplerian rate is not high enough to initiate softer states. Low-frequency quasi-periodic oscillations (QPOs) are observed sporadically although as in normal outbursts of transient black holes, monotonic evolutions of QPO frequency during both rising and declining phases are observed. From the TCAF fits, we find the mass of the black hole in the range of 7.5–11 M{sub ⊙}, and from time differences between peaks of the Keplerian and sub-Keplerian accretion rates we obtain a viscous timescale for this particular outburst, ∼10 days.« less

  6. Spectral Evolution of Intensive Microwave Bursts at Centimeter-Millimeter Wavelengths

    NASA Astrophysics Data System (ADS)

    Melnikov, V. F.; Magun, A.

    The dynamics of the frequency spectrum of intensive broad band microwave bursts with one spectral maximum and simple time profiles are investigated. The aim of the study is to correlate the temporal evolution of the microwave burst spectrum above and below the spectral peak frequency f_p, as well as to compare these features with theoretical expectations. The analysis was carried out by using the data from the patrol instruments of IAP, Bern University and NIRFI, Nizhnii Novgorod (10 fixed frequencies in the range 1-50 GHz). It has been found for the majority of these bursts that: a) during the rise phase of the burst flux there is an anticorrelation of the absolute values of the spectral indices above and below peak frequency whereas a good correlation during the decay phase was found; b) time delays between flux profiles at neighbouring frequencies change sign under the transition from low to high frequencies. As a rule the lower frequency emission is delayed at frequencies below f_p whereas at high frequencies (f>f_p) the higher frequency emission is delayed (see also Melnikov and Magun, 1998). Qualitatively these results fit well the calculated spectral evolution of the gyrosynchrotron if one takes into account the flattening of the electron energy spectrum in a flare loop (Melnikov and Magun, 1996) due to Coulomb collisions (Vilmer et al., 1982), and uses values for the background plasma density derived from hard X-ray data (Aschwanden et al., 1997). For some of the bursts, however, quantitative discrepancies with the predictions of the homogeneous model have been found. For these bursts the absolute value of the spectral index at low frequencies is remarkably smaller, and the time delay remarkably higher than expected. We have investigated several possibilities to obtain an agremeent between theory and observations. Special attention is paid to model calculations taking into account the dynamics of energetic electrons in flare loops with an inhomogeneous magnetic field and plasma density. In this context the capabilities of the models for the diagnostics of the physical conditions in flare loops using observations with high spatial

  7. Interference graph-based dynamic frequency reuse in optical attocell networks

    NASA Astrophysics Data System (ADS)

    Liu, Huanlin; Xia, Peijie; Chen, Yong; Wu, Lan

    2017-11-01

    Indoor optical attocell network may achieve higher capacity than radio frequency (RF) or Infrared (IR)-based wireless systems. It is proposed as a special type of visible light communication (VLC) system using Light Emitting Diodes (LEDs). However, the system spectral efficiency may be severely degraded owing to the inter-cell interference (ICI), particularly for dense deployment scenarios. To address these issues, we construct the spectral interference graph for indoor optical attocell network, and propose the Dynamic Frequency Reuse (DFR) and Weighted Dynamic Frequency Reuse (W-DFR) algorithms to decrease ICI and improve the spectral efficiency performance. The interference graph makes LEDs can transmit data without interference and select the minimum sub-bands needed for frequency reuse. Then, DFR algorithm reuses the system frequency equally across service-providing cells to mitigate spectrum interference. While W-DFR algorithm can reuse the system frequency by using the bandwidth weight (BW), which is defined based on the number of service users. Numerical results show that both of the proposed schemes can effectively improve the average spectral efficiency (ASE) of the system. Additionally, improvement of the user data rate is also obtained by analyzing its cumulative distribution function (CDF).

  8. Utilizing the Landsat spectral-temporal domain for improved mapping and monitoring of ecosystem state and dynamics

    NASA Astrophysics Data System (ADS)

    Pasquarella, Valerie J.

    Just as the carbon dioxide observations that form the Keeling curve revolutionized the study of the global carbon cycle, free and open access to all available Landsat imagery is fundamentally changing how the Landsat record is being used to study ecosystems and ecological dynamics. This dissertation advances the use of Landsat time series for visualization, classification, and detection of changes in terrestrial ecological processes. More specifically, it includes new examples of how complex ecological patterns manifest in time series of Landsat observations, as well as novel approaches for detecting and quantifying these patterns. Exploration of the complexity of spectral-temporal patterns in the Landsat record reveals both seasonal variability and longer-term trajectories difficult to characterize using conventional bi-temporal or even annual observations. These examples provide empirical evidence of hypothetical ecosystem response functions proposed by Kennedy et al. (2014). Quantifying observed seasonal and phenological differences in the spectral reflectance of Massachusetts' forest communities by combining existing harmonic curve fitting and phenology detection algorithms produces stable feature sets that consistently out-performed more traditional approaches for detailed forest type classification. This study addresses the current lack of species-level forest data at Landsat resolutions, demonstrating the advantages of spectral-temporal features as classification inputs. Development of a targeted change detection method using transformations of time series data improves spatial and temporal information on the occurrence of flood events in landscapes actively modified by recovering North American beaver (Castor canadensis) populations. These results indicate the utility of the Landsat record for the study of species-habitat relationships, even in complex wetland environments. Overall, this dissertation confirms the value of the Landsat archive as a continuous record of terrestrial ecosystem state and dynamics. Given the global coverage of remote sensing datasets, the time series visualization and analysis approaches presented here can be extended to other areas. These approaches will also be improved by more frequent collection of moderate resolution imagery, as planned by the Landsat and Sentinel-2 programs. In the modern era of global environmental change, use of the Landsat spectral-temporal domain presents new and exciting opportunities for the long-term large-scale study of ecosystem extent, composition, condition, and change.

  9. Unified treatment and measurement of the spectral resolution and temporal effects in frequency-resolved sum-frequency generation vibrational spectroscopy (SFG-VS).

    PubMed

    Velarde, Luis; Wang, Hong-Fei

    2013-12-14

    The lack of understanding of the temporal effects and the restricted ability to control experimental conditions in order to obtain intrinsic spectral lineshapes in surface sum-frequency generation vibrational spectroscopy (SFG-VS) have limited its applications in surface and interfacial studies. The emergence of high-resolution broadband sum-frequency generation vibrational spectroscopy (HR-BB-SFG-VS) with sub-wavenumber resolution [Velarde et al., J. Chem. Phys., 2011, 135, 241102] offers new opportunities for obtaining and understanding the spectral lineshapes and temporal effects in SFG-VS. Particularly, the high accuracy of the HR-BB-SFG-VS experimental lineshape provides detailed information on the complex coherent vibrational dynamics through direct spectral measurements. Here we present a unified formalism for the theoretical and experimental routes for obtaining an accurate lineshape of the SFG response. Then, we present a detailed analysis of a cholesterol monolayer at the air/water interface with higher and lower resolution SFG spectra along with their temporal response. With higher spectral resolution and accurate vibrational spectral lineshapes, it is shown that the parameters of the experimental SFG spectra can be used both to understand and to quantitatively reproduce the temporal effects in lower resolution SFG measurements. This perspective provides not only a unified picture but also a novel experimental approach to measuring and understanding the frequency-domain and time-domain SFG response of a complex molecular interface.

  10. Mesoscale resolution capability of altimetry: Present and future

    NASA Astrophysics Data System (ADS)

    Dufau, Claire; Orsztynowicz, Marion; Dibarboure, Gérald; Morrow, Rosemary; Le Traon, Pierre-Yves

    2016-07-01

    Wavenumber spectra of along-track Sea Surface Height from the most recent satellite radar altimetry missions [Jason-2, Cryosat-2, and SARAL/Altika) are used to determine the size of ocean dynamical features observable with the present altimetry constellation. A global analysis of the along-track 1-D mesoscale resolution capability of the present-day altimeter missions is proposed, based on a joint analysis of the spectral slopes in the mesoscale band and the error levels observed for horizontal wavelengths lower than 20km. The global sea level spectral slope distribution provided by Xu and Fu with Jason-1 data is revisited with more recent altimeter missions, and maps of altimeter error levels are provided and discussed for each mission. Seasonal variations of both spectral slopes and altimeter error levels are also analyzed for Jason-2. SARAL/Altika, with its lower error levels, is shown to detect smaller structures everywhere. All missions show substantial geographical and temporal variations in their mesoscale resolution capabilities, with variations depending mostly on the error level change but also on slight regional changes in the spectral slopes. In western boundary currents where the signal to noise ratio is favorable, the along-track mesoscale resolution is approximately 40 km for SARAL/AltiKa, 45 km for Cryosat-2, and 50 km for Jason-2. Finally, a prediction of the future 2-D mesoscale sea level resolution capability of the Surface Water and Ocean Topography (SWOT) mission is given using a simulated error level.

  11. Spectral response of the coral rubble, living corals, and dead corals: study case on the Spermonde Archipelago, Indonesia

    NASA Astrophysics Data System (ADS)

    Nurdin, Nurjannah; Komatsu, Teruhisa; Yamano, Hiroya; Arafat, Gulam; Rani, Chair; Akbar AS, M.

    2012-10-01

    Coral reefs play important ecological services such as providing foods, biodiversity, nutrient recycling etc. for human society. On the other hand, they are threatened by human impacts such as illegal fishing and environmental changes such as rises of sea water temperature and sea level due to global warming. Thus, it is very important to monitor dynamic spatial distributions of coral reefs and related habitats such as coral rubble, dead coral, bleached corals, seagrass, etc. Hyperspectral data, in particular, offer high potential for characterizing and mapping coral reefs because of their capability to identify individual reef components based on their detailed spectral response. We studied the optical properties by measuring in situ spectra of living corals, dead coral and coral rubble covered with algae. Study site was selected in Spermonde archipelago, South Sulawesi, Indonesia because this area is included in the highest diversity of corals in the world named as Coral Triangle, which is recognized as the global centre of marine biodiversity and a global priority for conservation. Correlation analysis and cluster analysis support that there are distinct differences in reflectance spectra among categories. Common spectral characteristic of living corals, dead corals and coral rubble covered with algae was a reflectance minimum at 674 nm. Healthy corals, dead coral covered with algae and coral rubble covered with algae showed high similarity of spectral reflectance. It is estimated that this is due to photsynthetic pigments.

  12. Multichannel Dynamic Fourier-Transform IR Spectrometer

    NASA Astrophysics Data System (ADS)

    Balashov, A. A.; Vaguine, V. A.; Golyak, Il. S.; Morozov, A. N.; Khorokhorin, A. I.

    2017-09-01

    A design of a multichannel continuous scan Fourier-transform IR spectrometer for simultaneous recording and analysis of the spectral characteristics of several objects is proposed. For implementing the design, a multi-probe fiber is used, constructed from several optical fibers connected into a single optical connector and attached at the output of the interferometer. The Fourier-transform spectrometer is used as a signal modulator. Each fiber is individually mated with an investigated sample and a dedicated radiation detector. For the developed system, the radiation intensity of the spectrometer is calculated from the condition of the minimum spectral resolution and parameters of the optical fibers. Using the proposed design, emission spectra of a gas-discharge neon lamp have been recorded using a single fiber 1 mm in diameter with a numerical aperture NA = 0.22.

  13. Spectral Analysis Tool 6.2 for Windows

    NASA Technical Reports Server (NTRS)

    Morgan, Feiming; Sue, Miles; Peng, Ted; Tan, Harry; Liang, Robert; Kinman, Peter

    2006-01-01

    Spectral Analysis Tool 6.2 is the latest version of a computer program that assists in analysis of interference between radio signals of the types most commonly used in Earth/spacecraft radio communications. [An earlier version was reported in Software for Analyzing Earth/Spacecraft Radio Interference (NPO-20422), NASA Tech Briefs, Vol. 25, No. 4 (April 2001), page 52.] SAT 6.2 calculates signal spectra, bandwidths, and interference effects for several families of modulation schemes. Several types of filters can be modeled, and the program calculates and displays signal spectra after filtering by any of the modeled filters. The program accommodates two simultaneous signals: a desired signal and an interferer. The interference-to-signal power ratio can be calculated for the filtered desired and interfering signals. Bandwidth-occupancy and link-budget calculators are included for the user s convenience. SAT 6.2 has a new software structure and provides a new user interface that is both intuitive and convenient. SAT 6.2 incorporates multi-tasking, multi-threaded execution, virtual memory management, and a dynamic link library. SAT 6.2 is designed for use on 32- bit computers employing Microsoft Windows operating systems.

  14. A real-time spectral mapper as an emerging diagnostic technology in biomedical sciences.

    PubMed

    Epitropou, George; Kavvadias, Vassilis; Iliou, Dimitris; Stathopoulos, Efstathios; Balas, Costas

    2013-01-01

    Real time spectral imaging and mapping at video rates can have tremendous impact not only on diagnostic sciences but also on fundamental physiological problems. We report the first real-time spectral mapper based on the combination of snap-shot spectral imaging and spectral estimation algorithms. Performance evaluation revealed that six band imaging combined with the Wiener algorithm provided high estimation accuracy, with error levels lying within the experimental noise. High accuracy is accompanied with much faster, by 3 orders of magnitude, spectral mapping, as compared with scanning spectral systems. This new technology is intended to enable spectral mapping at nearly video rates in all kinds of dynamic bio-optical effects as well as in applications where the target-probe relative position is randomly and fast changing.

  15. Close-range hyperspectral image analysis for the early detection of stress responses in individual plants in a high-throughput phenotyping platform

    NASA Astrophysics Data System (ADS)

    Mohd Asaari, Mohd Shahrimie; Mishra, Puneet; Mertens, Stien; Dhondt, Stijn; Inzé, Dirk; Wuyts, Nathalie; Scheunders, Paul

    2018-04-01

    The potential of close-range hyperspectral imaging (HSI) as a tool for detecting early drought stress responses in plants grown in a high-throughput plant phenotyping platform (HTPPP) was explored. Reflectance spectra from leaves in close-range imaging are highly influenced by plant geometry and its specific alignment towards the imaging system. This induces high uninformative variability in the recorded signals, whereas the spectral signature informing on plant biological traits remains undisclosed. A linear reflectance model that describes the effect of the distance and orientation of each pixel of a plant with respect to the imaging system was applied. By solving this model for the linear coefficients, the spectra were corrected for the uninformative illumination effects. This approach, however, was constrained by the requirement of a reference spectrum, which was difficult to obtain. As an alternative, the standard normal variate (SNV) normalisation method was applied to reduce this uninformative variability. Once the envisioned illumination effects were eliminated, the remaining differences in plant spectra were assumed to be related to changes in plant traits. To distinguish the stress-related phenomena from regular growth dynamics, a spectral analysis procedure was developed based on clustering, a supervised band selection, and a direct calculation of a spectral similarity measure against a reference. To test the significance of the discrimination between healthy and stressed plants, a statistical test was conducted using a one-way analysis of variance (ANOVA) technique. The proposed analysis techniques was validated with HSI data of maize plants (Zea mays L.) acquired in a HTPPP for early detection of drought stress in maize plant. Results showed that the pre-processing of reflectance spectra with the SNV effectively reduces the variability due to the expected illumination effects. The proposed spectral analysis method on the normalized spectra successfully detected drought stress from the third day of drought induction, confirming the potential of HSI for drought stress detection studies and further supporting its adoption in HTPPP.

  16. The Impact of Progenitor Mass Loss on the Dynamical and Spectral Evolution of Supernova Remnants

    NASA Astrophysics Data System (ADS)

    Patnaude, Daniel J.; Lee, Shiu-Hang; Slane, Patrick O.; Badenes, Carles; Nagataki, Shigehiro; Ellison, Donald C.; Milisavljevic, Dan

    2017-11-01

    There is now substantial evidence that the progenitors of some core-collapse supernovae undergo enhanced or extreme mass loss prior to explosion. The imprint of this mass loss is observed in the spectra and dynamics of the expanding blast wave on timescales of days to years after core collapse, and the effects on the spectral and dynamical evolution may linger long after the supernova has evolved into the remnant stage. In this paper, we present, for the first time, largely self-consistent end-to-end simulations for the evolution of a massive star from the pre-main sequence, up to and through core collapse, and into the remnant phase. We present three models and compare and contrast how the progenitor mass-loss history impacts the dynamics and spectral evolution of the supernovae and supernova remnants. We study a model that only includes steady mass loss, a model with enhanced mass loss over a period of ˜5000 yr prior to core collapse, and a model with extreme mass loss over a period of ˜500 yr prior to core collapse. The models are not meant to address any particular supernova or supernova remnant, but rather to highlight the important role that the progenitor evolution plays in the observable qualities of supernovae and supernova remnants. Through comparisons of these three different progenitor evolution scenarios, we find that the mass loss in late stages (during and after core carbon burning) can have a profound impact on the dynamics and spectral evolution of the supernova remnant centuries after core collapse.

  17. Probing dynamics in colloidal crystals with pump-probe experiments at LCLS: Methodology and analysis

    DOE PAGES

    Mukharamova, Nastasia; Lazarev, Sergey; Meijer, Janne -Mieke; ...

    2017-05-19

    We present results of the studies of dynamics in colloidal crystals performed by pump-probe experiments using an X-ray free-electron laser (XFEL). Colloidal crystals were pumped with an infrared laser at a wavelength of 800 nm with varying power and probed by XFEL pulses at an energy of 8 keV with a time delay up to 1000 ps. The positions of the Bragg peaks, and their radial and azimuthal widths were analyzed as a function of the time delay. The spectral analysis of the data did not reveal significant enhancement of frequencies expected in this experiment. As a result, this allowedmore » us to conclude that the amplitude of vibrational modes excited in colloidal crystals was less than the systematic error caused by the noise level.« less

  18. Effective description of domain wall strings

    NASA Astrophysics Data System (ADS)

    Rodrigues, Davi R.; Abanov, Ar.; Sinova, J.; Everschor-Sitte, K.

    2018-04-01

    The analysis of domain wall dynamics is often simplified to one-dimensional physics. For domain walls in thin films, more realistic approaches require the description as two-dimensional objects. This includes the study of vortices and curvatures along the domain walls as well as the influence of boundary effects. Here we provide a theory in terms of soft modes that allows us to analytically study the physics of extended domain walls and their stability. By considering irregularly shaped skyrmions as closed domain walls, we analyze their plasticity and compare their dynamics with those of circular skyrmions. Our theory directly provides an analytical description of the excitation modes of magnetic skyrmions, previously accessible only through sophisticated micromagnetic numerical calculations and spectral analysis. These analytical expressions provide the scaling behavior of the different physics on parameters that experiments can test.

  19. A Parallel Implementation of Multilevel Recursive Spectral Bisection for Application to Adaptive Unstructured Meshes. Chapter 1

    NASA Technical Reports Server (NTRS)

    Barnard, Stephen T.; Simon, Horst; Lasinski, T. A. (Technical Monitor)

    1994-01-01

    The design of a parallel implementation of multilevel recursive spectral bisection is described. The goal is to implement a code that is fast enough to enable dynamic repartitioning of adaptive meshes.

  20. Improving Our Ability to Assess Land Management and Disturbance by Linking Traditional Ecosystem Measurements with UAV Spectral Analysis

    NASA Astrophysics Data System (ADS)

    Sutter, L., Jr.; Barron-Gafford, G.; Smith, W. K.; Minor, R. L.; Raub, H.; Jimenez, J. R.; Wolsiffer, S. K.; Escobedo, E. B.; Smith, J.

    2017-12-01

    Drylands are dynamic landscapes of mixed plant functional types that vary in their response to abiotic and biotic drivers of change. Within these regions, woody plant-herbaceous relationships have generally been viewed as negative: woody plants within these ecosystems have been shown to negatively impact herbaceous growth by taking advantage of both deeper stored water and intercepting near surface moisture after precipitation events. There has been a long-invested effort to eliminate woody plants in many areas of the world, and analyzing and assessing land management decisions has historically required high monetary and time inputs. Unfortunately, both management practices and disturbances from fire can leave a very heterogeneous landscape, making assessment of their impacts difficult to assess. This study has attempted to address the effectiveness of two commonly used treatments within woody plant invaded areas, fire and herbicide application, by linking plant physiological measurements with the emerging technology of unmanned aerial vehicle (UAV) spectral analysis. Taking advantage of a USDA-ARS sponsored herbicide treatment in 2016 and the accidental Sawmill Fire of 2017, both within the Santa Rita Experimental Range (SRER) of Southern Arizona, USA, we linked spectral data collected via UAV with ground-based photosynthetic measurements. Given the high repeatability, and both spatial and spectral resolution of low-flying UAV measurements, we found that there are a variety of spectral indices that can be derived and accurately linked with traditional ecological measurements. Results and techniques from this study can be immediately applied to land management plans as well as be improved for other ecological parameters, such as those obtained from long-term study sites containing eddy covariance towers.

  1. Fundamental limits on dynamic inference from single-cell snapshots

    PubMed Central

    Weinreb, Caleb; Tusi, Betsabeh K.; Socolovsky, Merav

    2018-01-01

    Single-cell expression profiling reveals the molecular states of individual cells with unprecedented detail. Because these methods destroy cells in the process of analysis, they cannot measure how gene expression changes over time. However, some information on dynamics is present in the data: the continuum of molecular states in the population can reflect the trajectory of a typical cell. Many methods for extracting single-cell dynamics from population data have been proposed. However, all such attempts face a common limitation: for any measured distribution of cell states, there are multiple dynamics that could give rise to it, and by extension, multiple possibilities for underlying mechanisms of gene regulation. Here, we describe the aspects of gene expression dynamics that cannot be inferred from a static snapshot alone and identify assumptions necessary to constrain a unique solution for cell dynamics from static snapshots. We translate these constraints into a practical algorithmic approach, population balance analysis (PBA), which makes use of a method from spectral graph theory to solve a class of high-dimensional differential equations. We use simulations to show the strengths and limitations of PBA, and then apply it to single-cell profiles of hematopoietic progenitor cells (HPCs). Cell state predictions from this analysis agree with HPC fate assays reported in several papers over the past two decades. By highlighting the fundamental limits on dynamic inference faced by any method, our framework provides a rigorous basis for dynamic interpretation of a gene expression continuum and clarifies best experimental designs for trajectory reconstruction from static snapshot measurements. PMID:29463712

  2. Gender- and age-related differences in heart rate dynamics: are women more complex than men?

    NASA Technical Reports Server (NTRS)

    Ryan, S. M.; Goldberger, A. L.; Pincus, S. M.; Mietus, J.; Lipsitz, L. A.

    1994-01-01

    OBJECTIVES. This study aimed to quantify the complex dynamics of beat-to-beat sinus rhythm heart rate fluctuations and to determine their differences as a function of gender and age. BACKGROUND. Recently, measures of heart rate variability and the nonlinear "complexity" of heart rate dynamics have been used as indicators of cardiovascular health. Because women have lower cardiovascular risk and greater longevity than men, we postulated that there are important gender-related differences in beat-to-beat heart rate dynamics. METHODS. We analyzed heart rate dynamics during 8-min segments of continuous electrocardiographic recording in healthy young (20 to 39 years old), middle-aged (40 to 64 years old) and elderly (65 to 90 years old) men (n = 40) and women (n = 27) while they performed spontaneous and metronomic (15 breaths/min) breathing. Relatively high (0.15 to 0.40 Hz) and low (0.01 to 0.15 Hz) frequency components of heart rate variability were computed using spectral analysis. The overall "complexity" of each heart rate time series was quantified by its approximate entropy, a measure of regularity derived from nonlinear dynamics ("chaos" theory). RESULTS. Mean heart rate did not differ between the age groups or genders. High frequency heart rate power and the high/low frequency power ratio decreased with age in both men and women (p < 0.05). The high/low frequency power ratio during spontaneous and metronomic breathing was greater in women than men (p < 0.05). Heart rate approximate entropy decreased with age and was higher in women than men (p < 0.05). CONCLUSIONS. High frequency heart rate spectral power (associated with parasympathetic activity) and the overall complexity of heart rate dynamics are higher in women than men. These complementary findings indicate the need to account for gender-as well as age-related differences in heart rate dynamics. Whether these gender differences are related to lower cardiovascular disease risk and greater longevity in women requires further study.

  3. Complete particle-pair annihilation as a dynamical signature of the spectral singularity

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, G.R.; Zhang, X.Z.; Song, Z., E-mail: nkquantum@gmail.com

    2014-10-15

    Motivated by the physical relevance of a spectral singularity of interacting many-particle system, we explore the dynamics of two bosons as well as fermions in one-dimensional system with imaginary delta interaction strength. Based on the exact solution, it shows that the two-particle collision leads to amplitude-reduction of the wave function. For fermion pair, the amplitude-reduction depends on the spin configuration of two particles. In both cases, the residual amplitude can vanish when the relative group velocity of two single-particle Gaussian wave packets with equal width reaches the magnitude of the interaction strength, exhibiting complete particle-pair annihilation at the spectral singularity.more » - Highlights: • We investigate the physical relevance of a spectral singularity. • The two-particle collision leads to amplitude-reduction of the wave function. • There is a singularity spectrum which leads to complete particle-pair annihilation. • Complete particle-pair annihilation can only occur for two distinguishable bosons and singlet fermions. • Pair annihilation provides a detection method of the spectral singularity in the experiment.« less

  4. Analysis of spectral light guidance in specialty fibers

    NASA Astrophysics Data System (ADS)

    Zimmer, Arne W.; Raithel, Philipp; Belz, Mathias; Klein, Karl-Friedrich

    2016-04-01

    A novel experimental set-up for measuring the spectral dependency of light-guidance of specialty non-active multimodefibers will be introduced. Light coupling into the test fiber is realized and controlled with a micro-structured single mode (SM) fiber and an image-system based on a microscope objective The far- and near-field profiles of the SM-fiber will be shown. The inverse far field method is modified and improved by using three wavelengths simultaneously under the same input conditions; the coupling conditions into the test-fiber and the far- and near-field at fiber output are observed with cameras. The numerical aperture (NA) and mode-conversion or focal-ratio-degradation (FRD) are measured in respect to wavelength at three wavelengths in the VIS region. For the analysis, the patterns are captured at varying exposure times to increase the dynamic range and finally analyzed using image processing methods. Characteristic parameters, such as skew mode propagation and ray-conversion, of circular and non-circular MM-fibers will be discussed, taking the surface roughness into account.

  5. Estimating maximum instantaneous distortion from inlet total pressure rms and PSD measurements. [Root Mean Square and Power Spectral Density methods

    NASA Technical Reports Server (NTRS)

    Melick, H. C., Jr.; Ybarra, A. H.; Bencze, D. P.

    1975-01-01

    An inexpensive method is developed to determine the extreme values of instantaneous inlet distortion. This method also provides insight into the basic mechanics of unsteady inlet flow and the associated engine reaction. The analysis is based on fundamental fluid dynamics and statistical methods to provide an understanding of the turbulent inlet flow and quantitatively relate the rms level and power spectral density (PSD) function of the measured time variant total pressure fluctuations to the strength and size of the low pressure regions. The most probable extreme value of the instantaneous distortion is then synthesized from this information in conjunction with the steady state distortion. Results of the analysis show the extreme values to be dependent upon the steady state distortion, the measured turbulence rms level and PSD function, the time on point, and the engine response characteristics. Analytical projections of instantaneous distortion are presented and compared with data obtained by a conventional, highly time correlated, 40 probe instantaneous pressure measurement system.

  6. Cardiac reserve during weightlessness simulation and shuttle flight

    NASA Technical Reports Server (NTRS)

    Goldberger, A. L.

    1985-01-01

    Bedrest deconditioning is suspected to reduce cardiac function. However, quantitation of subtle decreases in cardiac reserve may be difficult. Normal subjects show considerable variability in heart rate response, reflected by a relatively broadband interbeat interval power spectrum. We hypothesized that the deconditioning effects of bedrest would induce narrowing of this spectrum, reflecting a reduction in the autonomically-modulated variability in heart rate. Ten aerobically conditioned men (average 35-50 years) underwent orthostatic tolerance testing with lower body negative pressure pre-bedrest and after 10 days of bedrest, while on placebo and after intravenous atropine. Spectra were derived by Fourier analysis of 128 interbeat interval data sets from subjects with sufficient numbers of beats during matched periods of the protocol. Data suggest that atropine unmasks the deconditioning effect of bedrest in athletic men, evidenced by a reduction in interbeat interval spectral power compared with placebo. Spectral analysis offers a new means of quantitating the effects of bedrest deconditioning and autonomic perturbations on cardiac dynamics.

  7. Evaluation of localized muscle fatigue using power spectral density analysis of the electromyogram

    NASA Technical Reports Server (NTRS)

    Lafevers, E. V.

    1974-01-01

    Surface electromyograms (EMGs) taken from three upper torso muscles during a push-pull task were analyzed by a power spectral density technique to determine the operational feasibility of the technique for identifying changes in the EMGs resulting from muscular fatigue. The EMGs were taken from four subjects under two conditions (1) in shirtsleeves and (2) in a pressurized space suit. This study confirmed that frequency analysis of dynamic muscle activity is capable of providing reliable data for many industrial applications where fatigue may be of practical interest. The results showed significant effects of the pressurized space suit on the pattern of shirtsleeve fatigue responses of the muscles. The data also revealed (1) reliable differences between muscles in fatigue-induced responses to various locations in the reach envelope at which the subjects were required to perform the push-pull exercise and (2) the differential sensitivity of muscles to the various reach positions in terms of fatigue-related shifts in EMG power.

  8. Dynamics of a spin-boson model with structured spectral density

    NASA Astrophysics Data System (ADS)

    Kurt, Arzu; Eryigit, Resul

    2018-05-01

    We report the results of a study of the dynamics of a two-state system coupled to an environment with peaked spectral density. An exact analytical expression for the bath correlation function is obtained. Validity range of various approximations to the correlation function for calculating the population difference of the system is discussed as function of tunneling splitting, oscillator frequency, coupling constant, damping rate and the temperature of the bath. An exact expression for the population difference, for a limited range of parameters, is derived.

  9. Multiple Point Dynamic Gas Density Measurements Using Molecular Rayleigh Scattering

    NASA Technical Reports Server (NTRS)

    Seasholtz, Richard; Panda, Jayanta

    1999-01-01

    A nonintrusive technique for measuring dynamic gas density properties is described. Molecular Rayleigh scattering is used to measure the time-history of gas density simultaneously at eight spatial locations at a 50 kHz sampling rate. The data are analyzed using the Welch method of modified periodograms to reduce measurement uncertainty. Cross-correlations, power spectral density functions, cross-spectral density functions, and coherence functions may be obtained from the data. The technique is demonstrated using low speed co-flowing jets with a heated inner jet.

  10. High-Order Methods for Computational Fluid Dynamics: A Brief Review of Compact Differential Formulations on Unstructured Grids

    NASA Technical Reports Server (NTRS)

    Huynh, H. T.; Wang, Z. J.; Vincent, P. E.

    2013-01-01

    Popular high-order schemes with compact stencils for Computational Fluid Dynamics (CFD) include Discontinuous Galerkin (DG), Spectral Difference (SD), and Spectral Volume (SV) methods. The recently proposed Flux Reconstruction (FR) approach or Correction Procedure using Reconstruction (CPR) is based on a differential formulation and provides a unifying framework for these high-order schemes. Here we present a brief review of recent developments for the FR/CPR schemes as well as some pacing items.

  11. A spectral-spatial-dynamic hierarchical Bayesian (SSD-HB) model for estimating soybean yield

    NASA Astrophysics Data System (ADS)

    Kazama, Yoriko; Kujirai, Toshihiro

    2014-10-01

    A method called a "spectral-spatial-dynamic hierarchical-Bayesian (SSD-HB) model," which can deal with many parameters (such as spectral and weather information all together) by reducing the occurrence of multicollinearity, is proposed. Experiments conducted on soybean yields in Brazil fields with a RapidEye satellite image indicate that the proposed SSD-HB model can predict soybean yield with a higher degree of accuracy than other estimation methods commonly used in remote-sensing applications. In the case of the SSD-HB model, the mean absolute error between estimated yield of the target area and actual yield is 0.28 t/ha, compared to 0.34 t/ha when conventional PLS regression was applied, showing the potential effectiveness of the proposed model.

  12. A Psychophysical Evaluation of Spectral Enhancement

    ERIC Educational Resources Information Center

    DiGiovanni, Jeffrey J.; Nelson, Peggy B.; Schlauch, Robert S.

    2005-01-01

    Listeners with sensorineural hearing loss have well-documented elevated hearing thresholds; reduced auditory dynamic ranges; and reduced spectral (or frequency) resolution that may reduce speech intelligibility, especially in the presence of competing sounds. Amplification and amplitude compression partially compensate for elevated thresholds and…

  13. Effects of whole body heating on dynamic baroreflex regulation of heart rate in humans

    NASA Technical Reports Server (NTRS)

    Crandall, C. G.; Zhang, R.; Levine, B. D.

    2000-01-01

    The purpose of this project was to identify whether dynamic baroreflex regulation of heart rate (HR) is altered during whole body heating. In 14 subjects, dynamic baroreflex regulation of HR was assessed using transfer function analysis. In normothermic and heat-stressed conditions, each subject breathed at a fixed rate (0. 25 Hz) while beat-by-beat HR and systolic blood pressure (SBP) were obtained. Whole body heating significantly increased sublingual temperature, HR, and forearm skin blood flow. Spectral analysis of HR and SBP revealed that the heat stress significantly reduced HR and SBP variability within the high-frequency range (0.2-0.3 Hz), reduced SBP variability within the low-frequency range (0.03-0.15 Hz), and increased the ratio of low- to high-frequency HR variability (all P < 0.01). Transfer function gain analysis showed that the heat stress reduced dynamic baroreflex regulation of HR within the high-frequency range (from 1.04 +/- 0.06 to 0.54 +/- 0.6 beats. min(-1). mmHg(-1); P < 0.001) without significantly affecting the gain in the low-frequency range (P = 0.63). These data suggest that whole body heating reduced high-frequency dynamic baroreflex regulation of HR associated with spontaneous changes in blood pressure. Reduced vagal baroreflex regulation of HR may contribute to reduced orthostatic tolerance known to occur in humans during heat stress.

  14. Parallel-multiplexed excitation light-sheet microscopy (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Xu, Dongli; Zhou, Weibin; Peng, Leilei

    2017-02-01

    Laser scanning light-sheet imaging allows fast 3D image of live samples with minimal bleach and photo-toxicity. Existing light-sheet techniques have very limited capability in multi-label imaging. Hyper-spectral imaging is needed to unmix commonly used fluorescent proteins with large spectral overlaps. However, the challenge is how to perform hyper-spectral imaging without sacrificing the image speed, so that dynamic and complex events can be captured live. We report wavelength-encoded structured illumination light sheet imaging (λ-SIM light-sheet), a novel light-sheet technique that is capable of parallel multiplexing in multiple excitation-emission spectral channels. λ-SIM light-sheet captures images of all possible excitation-emission channels in true parallel. It does not require compromising the imaging speed and is capable of distinguish labels by both excitation and emission spectral properties, which facilitates unmixing fluorescent labels with overlapping spectral peaks and will allow more labels being used together. We build a hyper-spectral light-sheet microscope that combined λ-SIM with an extended field of view through Bessel beam illumination. The system has a 250-micron-wide field of view and confocal level resolution. The microscope, equipped with multiple laser lines and an unlimited number of spectral channels, can potentially image up to 6 commonly used fluorescent proteins from blue to red. Results from in vivo imaging of live zebrafish embryos expressing various genetic markers and sensors will be shown. Hyper-spectral images from λ-SIM light-sheet will allow multiplexed and dynamic functional imaging in live tissue and animals.

  15. Spectral analysis for weighted tree-like fractals

    NASA Astrophysics Data System (ADS)

    Dai, Meifeng; Chen, Yufei; Wang, Xiaoqian; Sun, Yu; Su, Weiyi

    2018-02-01

    Much information about the structural properties and dynamical aspects of a network is measured by the eigenvalues of its normalized Laplacian matrix. In this paper, we aim to present a study on the spectra of the normalized Laplacian of weighted tree-like fractals. We analytically obtain the relationship between the eigenvalues and their multiplicities for two successive generations. As an example of application of these results, we then derive closed-form expressions for their multiplicative Kirchhoff index and Kemeny's constant.

  16. Spectral analysis of the gravity and topography of Mars

    NASA Technical Reports Server (NTRS)

    Bills, Bruce G.; Frey, Herbert V.; Kiefer, Walter S.; Nerem, R. Steven; Zuber, Maria T.

    1993-01-01

    New spherical harmonic models of the gravity and topography of Mars place important constraints on the structure and dynamics of the interior. The gravity and topography models are significantly phase coherent for harmonic degrees n less than 30 (wavelengths greater than 700 km). Loss of coherence below that wavelength is presumably due to inadequacies of the models, rather than a change in behavior of the planet. The gravity/topography admittance reveals two very different spectral domains: for n greater than 4, a simple Airy compensation model, with mean depth of 100 km, faithfully represents the observed pattern; for degrees 2 and 3, the effective compensation depths are 1400 and 550 km, respectively, strongly arguing for dynamic compensation at those wavelengths. The gravity model has been derived from a reanalysis of the tracking data for Mariner 9 and the Viking Orbiters, The topography model was derived by harmonic analysis of the USGS digital elevation model of Mars. Before comparing gravity and topography for internal structure inferences, we must ensure that both are consistently referenced to a hydrostatic datum. For the gravity, this involves removal of hydrostatic components of the even degree zonal coefficients. For the topography, it involves adding the degree 4 equipotential reference surface, to get spherically referenced values, and then subtracting the full degree 50 equipotential. Variance spectra and phase coherence of orthometric heights and gravity anomalies are addressed.

  17. A hyperspectral image projector for hyperspectral imagers

    NASA Astrophysics Data System (ADS)

    Rice, Joseph P.; Brown, Steven W.; Neira, Jorge E.; Bousquet, Robert R.

    2007-04-01

    We have developed and demonstrated a Hyperspectral Image Projector (HIP) intended for system-level validation testing of hyperspectral imagers, including the instrument and any associated spectral unmixing algorithms. HIP, based on the same digital micromirror arrays used in commercial digital light processing (DLP*) displays, is capable of projecting any combination of many different arbitrarily programmable basis spectra into each image pixel at up to video frame rates. We use a scheme whereby one micromirror array is used to produce light having the spectra of endmembers (i.e. vegetation, water, minerals, etc.), and a second micromirror array, optically in series with the first, projects any combination of these arbitrarily-programmable spectra into the pixels of a 1024 x 768 element spatial image, thereby producing temporally-integrated images having spectrally mixed pixels. HIP goes beyond conventional DLP projectors in that each spatial pixel can have an arbitrary spectrum, not just arbitrary color. As such, the resulting spectral and spatial content of the projected image can simulate realistic scenes that a hyperspectral imager will measure during its use. Also, the spectral radiance of the projected scenes can be measured with a calibrated spectroradiometer, such that the spectral radiance projected into each pixel of the hyperspectral imager can be accurately known. Use of such projected scenes in a controlled laboratory setting would alleviate expensive field testing of instruments, allow better separation of environmental effects from instrument effects, and enable system-level performance testing and validation of hyperspectral imagers as used with analysis algorithms. For example, known mixtures of relevant endmember spectra could be projected into arbitrary spatial pixels in a hyperspectral imager, enabling tests of how well a full system, consisting of the instrument + calibration + analysis algorithm, performs in unmixing (i.e. de-convolving) the spectra in all pixels. We discuss here the performance of a visible prototype HIP. The technology is readily extendable to the ultraviolet and infrared spectral ranges, and the scenes can be static or dynamic.

  18. Predictive value of EEG in postanoxic encephalopathy: A quantitative model-based approach.

    PubMed

    Efthymiou, Evdokia; Renzel, Roland; Baumann, Christian R; Poryazova, Rositsa; Imbach, Lukas L

    2017-10-01

    The majority of comatose patients after cardiac arrest do not regain consciousness due to severe postanoxic encephalopathy. Early and accurate outcome prediction is therefore essential in determining further therapeutic interventions. The electroencephalogram is a standardized and commonly available tool used to estimate prognosis in postanoxic patients. The identification of pathological EEG patterns with poor prognosis relies however primarily on visual EEG scoring by experts. We introduced a model-based approach of EEG analysis (state space model) that allows for an objective and quantitative description of spectral EEG variability. We retrospectively analyzed standard EEG recordings in 83 comatose patients after cardiac arrest between 2005 and 2013 in the intensive care unit of the University Hospital Zürich. Neurological outcome was assessed one month after cardiac arrest using the Cerebral Performance Category. For a dynamic and quantitative EEG analysis, we implemented a model-based approach (state space analysis) to quantify EEG background variability independent from visual scoring of EEG epochs. Spectral variability was compared between groups and correlated with clinical outcome parameters and visual EEG patterns. Quantitative assessment of spectral EEG variability (state space velocity) revealed significant differences between patients with poor and good outcome after cardiac arrest: Lower mean velocity in temporal electrodes (T4 and T5) was significantly associated with poor prognostic outcome (p<0.005) and correlated with independently identified visual EEG patterns such as generalized periodic discharges (p<0.02). Receiver operating characteristic (ROC) analysis confirmed the predictive value of lower state space velocity for poor clinical outcome after cardiac arrest (AUC 80.8, 70% sensitivity, 15% false positive rate). Model-based quantitative EEG analysis (state space analysis) provides a novel, complementary marker for prognosis in postanoxic encephalopathy. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. An HF and lower VHF spectrum assessment system exploiting instantaneously wideband capture

    NASA Astrophysics Data System (ADS)

    Barnes, Rod I.; Singh, Malkiat; Earl, Fred

    2017-09-01

    We report on a spectral environment evaluation and recording (SEER) system, for instantaneously wideband spectral capture and characterization in the HF and lower VHF band, utilizing a direct digital receiver coupled to a data recorder. The system is designed to contend with a wide variety of electromagnetic environments and to provide accurately calibrated spectral characterization and display from very short (ms) to synoptic scales. The system incorporates a novel RF front end involving automated gain and equalization filter selection which provides an analogue frequency-dependent gain characteristic that mitigates the high dynamic range found across the HF and lower VHF spectrum. The system accurately calibrates its own internal noise and automatically subtracts this from low variance, external spectral estimates, further extending the dynamic range over which robust characterization is possible. Laboratory and field experiments demonstrate that the implementation of these concepts has been effective. Sensitivity to varying antenna load impedance of the internal noise reduction process has been examined. Examples of software algorithms to provide extraction and visualization of spectral behavior over narrowband, wideband, short, and synoptic scales are provided. Application in HF noise spectral density monitoring, spectral signal strength assessment, and electromagnetic interference detection is possible with examples provided. The instantaneously full bandwidth collection provides some innovative applications, and this is demonstrated by the collection of discrete lightning emissions, which form fast ionograms called "flashagrams" in power-delay-frequency plots.

  20. Indications of the Mineralogy of Callisto and Mars from Reflectance Spectroscopy.

    NASA Astrophysics Data System (ADS)

    Calvin, Wendy Marie

    1991-02-01

    Remotely sensed reflectance spectra contain information on mineral identities, grain sizes, and abundances. This thesis consists of analysis of such spectra for two planetary objects, Callisto and Mars. Theoretical modeling of telescopic spectra of Callisto indicates that the surface consists of 20 to 45 wt% water ice at large grain sizes. In the spectral region beyond 3 μm absorption by hydrated mineral phases is dominant. The non-ice material is spectrally similar to hydrous alteration minerals that are commonly found in certain petrologic types of meteorites. New high-resolution data of Callisto are consistent with the findings of the modeling study. In addition, these new data have identified the presence of a small amount of fine-grained water ice on the leading hemisphere, through a characteristic absorption near 3.4 mum. Variations in the depth of this absorption feature indicate dynamic competition between processes which create and erode fine -grained water ice. Calibration and analysis of spectrometer data from the Mariner 6 and 7 space-craft has provided new information regarding the mineralogy of Mars. Laboratory measurements and theoretical calculations of CO_2 frosts have allowed an analysis of spectra taken over the martian south polar cap. The grain sizes in the seasonal cap are quite large and there may be evidence of contamination by water frost or dust. Analysis of Mariner spectra in non-polar regions have tentatively identified absorption features near 2.76 μm and 5.4 mum. The location of these features, and other absorptions identified from terrestrial observations, are consistent with the spectra of hydrous magnesium carbonates. The hydrous carbonates do not have strong spectral features typically associated with carbonates. Theoretical calculations of mixtures indicates that 10-30wt% of these minerals can be included and still be consistent with spectral observations. These minerals form on earth through weathering of mafic minerals with the production of amorphous iron oxides as byproducts, consistent with both present and inferred past martian environments. The presence of hydrous carbonates can provide a mechanism for having abundant carbonates on Mars while spectral searches for (anhydrous) carbonates will not find any evidence for them.

  1. A Robust Dynamic Heart-Rate Detection Algorithm Framework During Intense Physical Activities Using Photoplethysmographic Signals

    PubMed Central

    Song, Jiajia; Li, Dan; Ma, Xiaoyuan; Teng, Guowei; Wei, Jianming

    2017-01-01

    Dynamic accurate heart-rate (HR) estimation using a photoplethysmogram (PPG) during intense physical activities is always challenging due to corruption by motion artifacts (MAs). It is difficult to reconstruct a clean signal and extract HR from contaminated PPG. This paper proposes a robust HR-estimation algorithm framework that uses one-channel PPG and tri-axis acceleration data to reconstruct the PPG and calculate the HR based on features of the PPG and spectral analysis. Firstly, the signal is judged by the presence of MAs. Then, the spectral peaks corresponding to acceleration data are filtered from the periodogram of the PPG when MAs exist. Different signal-processing methods are applied based on the amount of remaining PPG spectral peaks. The main MA-removal algorithm (NFEEMD) includes the repeated single-notch filter and ensemble empirical mode decomposition. Finally, HR calibration is designed to ensure the accuracy of HR tracking. The NFEEMD algorithm was performed on the 23 datasets from the 2015 IEEE Signal Processing Cup Database. The average estimation errors were 1.12 BPM (12 training datasets), 2.63 BPM (10 testing datasets) and 1.87 BPM (all 23 datasets), respectively. The Pearson correlation was 0.992. The experiment results illustrate that the proposed algorithm is not only suitable for HR estimation during continuous activities, like slow running (13 training datasets), but also for intense physical activities with acceleration, like arm exercise (10 testing datasets). PMID:29068403

  2. Nontemplated Approach to Tuning the Spectral Propertiesof Cyanine-Based Fluorescent NanoGUMBOS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Das, Susmita; Bwambok, David; El-Zahab, Bilal

    2010-01-01

    Template-free controlled aggregation and spectral properties in fluorescent organic nanoparticles (FONs) is highly desirable for various applications.Herein, we report a nontemplated method for controlling the aggregation in near-infrared (NIR) cyanine-based nanoparticles derived from a group of uniformmaterials based on organic salts (GUMBOS). Cationic heptamethine cyanine dye 1,10,3,3,30,30-hexamethylindotricarbocyanine (HMT) was coupled with five different anions, viz., [NTf2 -], [BETI-], [TFPB-], [AOT-], and [TFP4B-], by an ion-exchange method to obtain the respective GUMBOS. The nanoGUMBOS obtained via a reprecipitation method were primarily amorphous and spherical (30-100 nm) as suggested by selected area electron diffraction (SAED) and transmission electron microscopy (TEM). The formationmore » of tunable self-assemblies within the nanoGUMBOS was characterized using absorption and fluorescence spectroscopy in conjunction with molecular dynamics simulations. Counterion-controlled spectral properties observed in the nanoGUMBOS were attributed to variations in J/H ratios with different anions. Association with the [AOT-] anion afforded predominant J aggregation enabling the highest fluorescence intensity, whereas [TFP4B-] disabled the fluorescence due to predominantHaggregation in the nanoparticles. Analyses of the stacking angle of the cations based on molecular dynamic simulation results in [HMT][NTf2], [HMT][BETI], and [HMT][AOT] dispersed in water and a visual analysis of the representative simulation snapshots also imply that the type of aggregation was controlled through the counterion associated with the dye cation.« less

  3. Tracking brain states under general anesthesia by using global coherence analysis.

    PubMed

    Cimenser, Aylin; Purdon, Patrick L; Pierce, Eric T; Walsh, John L; Salazar-Gomez, Andres F; Harrell, Priscilla G; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery N

    2011-05-24

    Time and frequency domain analyses of scalp EEG recordings are widely used to track changes in brain states under general anesthesia. Although these analyses have suggested that different spatial patterns are associated with changes in the state of general anesthesia, the extent to which these patterns are spatially coordinated has not been systematically characterized. Global coherence, the ratio of the largest eigenvalue to the sum of the eigenvalues of the cross-spectral matrix at a given frequency and time, has been used to analyze the spatiotemporal dynamics of multivariate time-series. Using 64-lead EEG recorded from human subjects receiving computer-controlled infusions of the anesthetic propofol, we used surface Laplacian referencing combined with spectral and global coherence analyses to track the spatiotemporal dynamics of the brain's anesthetic state. During unconsciousness the spectrograms in the frontal leads showed increasing α (8-12 Hz) and δ power (0-4 Hz) and in the occipital leads δ power greater than α power. The global coherence detected strong coordinated α activity in the occipital leads in the awake state that shifted to the frontal leads during unconsciousness. It revealed a lack of coordinated δ activity during both the awake and unconscious states. Although strong frontal power during general anesthesia-induced unconsciousness--termed anteriorization--is well known, its possible association with strong α range global coherence suggests highly coordinated spatial activity. Our findings suggest that combined spectral and global coherence analyses may offer a new approach to tracking brain states under general anesthesia.

  4. Spectral Induced Polarization Signatures of Ethanol in Sand-Clay Medium

    EPA Science Inventory

    The spectral Induced Polarization (SIP) method has previously been investigated as a tool for detecting physicochemical changes occurring as result of clay-organic interactions in porous media. We performed SIP measurements with a dynamic signal analyzer (NI-4551) on laboratory ...

  5. Multilayer-MCTDH approach to the energy transfer dynamics in the LH2 antenna complex

    NASA Astrophysics Data System (ADS)

    Shibl, Mohamed F.; Schulze, Jan; Al-Marri, Mohammed J.; Kühn, Oliver

    2017-09-01

    The multilayer multiconfiguration time-dependent Hartree method is used to study the coupled exciton-vibrational dynamics in a high-dimensional nonameric model of the LH2 antenna complex of purple bacteria. The exciton-vibrational coupling is parametrized within the Huang-Rhys model according to phonon and intramolecular vibrational modes derived from an experimental bacteriochlorophyll spectral density. In contrast to reduced density matrix approaches, the Schrödinger equation is solved explicitly, giving access to the full wave function. This facilitates an unbiased analysis in terms of the coupled dynamics of excitonic and vibrational degrees of freedom. For the present system, we identify spectator modes for the B800 to B800 transfer and we find a non-additive effect of phonon and intramolecular vibrational modes on the B800 to B850 exciton transfer.

  6. Brain-computer interface signal processing at the Wadsworth Center: mu and sensorimotor beta rhythms.

    PubMed

    McFarland, Dennis J; Krusienski, Dean J; Wolpaw, Jonathan R

    2006-01-01

    The Wadsworth brain-computer interface (BCI), based on mu and beta sensorimotor rhythms, uses one- and two-dimensional cursor movement tasks and relies on user training. This is a real-time closed-loop system. Signal processing consists of channel selection, spatial filtering, and spectral analysis. Feature translation uses a regression approach and normalization. Adaptation occurs at several points in this process on the basis of different criteria and methods. It can use either feedforward (e.g., estimating the signal mean for normalization) or feedback control (e.g., estimating feature weights for the prediction equation). We view this process as the interaction between a dynamic user and a dynamic system that coadapt over time. Understanding the dynamics of this interaction and optimizing its performance represent a major challenge for BCI research.

  7. Lifespan differences in nonlinear dynamics during rest and auditory oddball performance.

    PubMed

    Müller, Viktor; Lindenberger, Ulman

    2012-07-01

    Electroencephalographic recordings (EEG) were used to assess age-associated differences in nonlinear brain dynamics during both rest and auditory oddball performance in children aged 9.0-12.8 years, younger adults, and older adults. We computed nonlinear coupling dynamics and dimensional complexity, and also determined spectral alpha power as an indicator of cortical reactivity. During rest, both nonlinear coupling and spectral alpha power decreased with age, whereas dimensional complexity increased. In contrast, when attending to the deviant stimulus, nonlinear coupling increased with age, and complexity decreased. Correlational analyses showed that nonlinear measures assessed during auditory oddball performance were reliably related to an independently assessed measure of perceptual speed. We conclude that cortical dynamics during rest and stimulus processing undergo substantial reorganization from childhood to old age, and propose that lifespan age differences in nonlinear dynamics during stimulus processing reflect lifespan changes in the functional organization of neuronal cell assemblies. © 2012 Blackwell Publishing Ltd.

  8. Detecting and disentangling nonlinear structure from solar flux time series

    NASA Technical Reports Server (NTRS)

    Ashrafi, S.; Roszman, L.

    1992-01-01

    Interest in solar activity has grown in the past two decades for many reasons. Most importantly for flight dynamics, solar activity changes the atmospheric density, which has important implications for spacecraft trajectory and lifetime prediction. Building upon the previously developed Rayleigh-Benard nonlinear dynamic solar model, which exhibits many dynamic behaviors observed in the Sun, this work introduces new chaotic solar forecasting techniques. Our attempt to use recently developed nonlinear chaotic techniques to model and forecast solar activity has uncovered highly entangled dynamics. Numerical techniques for decoupling additive and multiplicative white noise from deterministic dynamics and examines falloff of the power spectra at high frequencies as a possible means of distinguishing deterministic chaos from noise than spectrally white or colored are presented. The power spectral techniques presented are less cumbersome than current methods for identifying deterministic chaos, which require more computationally intensive calculations, such as those involving Lyapunov exponents and attractor dimension.

  9. Monitoring equilibrium reaction dynamics of a nearly barrierless molecular rotor using ultrafast vibrational echoes

    NASA Astrophysics Data System (ADS)

    Nilsen, Ian A.; Osborne, Derek G.; White, Aaron M.; Anna, Jessica M.; Kubarych, Kevin J.

    2014-10-01

    Using rapidly acquired spectral diffusion, a recently developed variation of heterodyne detected infrared photon echo spectroscopy, we observe ˜3 ps solvent independent spectral diffusion of benzene chromium tricarbonyl (C6H6Cr(CO)3, BCT) in a series of nonpolar linear alkane solvents. The spectral dynamics is attributed to low-barrier internal torsional motion. This tripod complex has two stable minima corresponding to staggered and eclipsed conformations, which differ in energy by roughly half of kBT. The solvent independence is due to the relative size of the rotor compared with the solvent molecules, which create a solvent cage in which torsional motion occurs largely free from solvent damping. Since the one-dimensional transition state is computed to be only 0.03 kBT above the higher energy eclipsed conformation, this model system offers an unusual, nearly barrierless reaction, which nevertheless is characterized by torsional coordinate dependent vibrational frequencies. Hence, by studying the spectral diffusion of the tripod carbonyls, it is possible to gain insight into the fundamental dynamics of internal rotational motion, and we find some evidence for the importance of non-diffusive ballistic motion even in the room-temperature liquid environment. Using several different approaches to describe equilibrium kinetics, as well as the influence of reactive dynamics on spectroscopic observables, we provide evidence that the low-barrier torsional motion of BCT provides an excellent test case for detailed studies of the links between chemical exchange and linear and nonlinear vibrational spectroscopy.

  10. Spectral mapping tools from the earth sciences applied to spectral microscopy data.

    PubMed

    Harris, A Thomas

    2006-08-01

    Spectral imaging, originating from the field of earth remote sensing, is a powerful tool that is being increasingly used in a wide variety of applications for material identification. Several workers have used techniques like linear spectral unmixing (LSU) to discriminate materials in images derived from spectral microscopy. However, many spectral analysis algorithms rely on assumptions that are often violated in microscopy applications. This study explores algorithms originally developed as improvements on early earth imaging techniques that can be easily translated for use with spectral microscopy. To best demonstrate the application of earth remote sensing spectral analysis tools to spectral microscopy data, earth imaging software was used to analyze data acquired with a Leica confocal microscope with mechanical spectral scanning. For this study, spectral training signatures (often referred to as endmembers) were selected with the ENVI (ITT Visual Information Solutions, Boulder, CO) "spectral hourglass" processing flow, a series of tools that use the spectrally over-determined nature of hyperspectral data to find the most spectrally pure (or spectrally unique) pixels within the data set. This set of endmember signatures was then used in the full range of mapping algorithms available in ENVI to determine locations, and in some cases subpixel abundances of endmembers. Mapping and abundance images showed a broad agreement between the spectral analysis algorithms, supported through visual assessment of output classification images and through statistical analysis of the distribution of pixels within each endmember class. The powerful spectral analysis algorithms available in COTS software, the result of decades of research in earth imaging, are easily translated to new sources of spectral data. Although the scale between earth imagery and spectral microscopy is radically different, the problem is the same: mapping material locations and abundances based on unique spectral signatures. (c) 2006 International Society for Analytical Cytology.

  11. Satellite-Enhanced Dynamical Downscaling of Extreme Events

    NASA Astrophysics Data System (ADS)

    Nunes, A.

    2015-12-01

    Severe weather events can be the triggers of environmental disasters in regions particularly susceptible to changes in hydrometeorological conditions. In that regard, the reconstruction of past extreme weather events can help in the assessment of vulnerability and risk mitigation actions. Using novel modeling approaches, dynamical downscaling of long-term integrations from global circulation models can be useful for risk analysis, providing more accurate climate information at regional scales. Originally developed at the National Centers for Environmental Prediction (NCEP), the Regional Spectral Model (RSM) is being used in the dynamical downscaling of global reanalysis, within the South American Hydroclimate Reconstruction Project. Here, RSM combines scale-selective bias correction with assimilation of satellite-based precipitation estimates to downscale extreme weather occurrences. Scale-selective bias correction is a method employed in the downscaling, similar to the spectral nudging technique, in which the downscaled solution develops in agreement with its coarse boundaries. Precipitation assimilation acts on modeled deep-convection, drives the land-surface variables, and therefore the hydrological cycle. During the downscaling of extreme events that took place in Brazil in recent years, RSM continuously assimilated NCEP Climate Prediction Center morphing technique precipitation rates. As a result, RSM performed better than its global (reanalysis) forcing, showing more consistent hydrometeorological fields compared with more sophisticated global reanalyses. Ultimately, RSM analyses might provide better-quality initial conditions for high-resolution numerical predictions in metropolitan areas, leading to more reliable short-term forecasting of severe local storms.

  12. Leaf Phenology of Amazonian Canopy Trees as Revealed by Spectral and Physiochemical Measurements

    NASA Astrophysics Data System (ADS)

    Chavana-Bryant, C.; Gerard, F. F.; Malhi, Y.; Enquist, B. J.; Asner, G. P.

    2013-12-01

    The phenological dynamics of terrestrial ecosystems reflect the response of the Earth's biosphere to inter- and intra-annual dynamics of climatic and hydrological regimes. Some Dynamic Global Vegetation Models (GDVMs) have predicted that by 2050 the Amazon rainforest will begin to dieback (Cox et al. 2000, Nature) or that the ecosystem will become unsustainable (Salazar et al. 2007, GRL). One major component in DGVMs is the simulation of vegetation phenology, however, modelers are challenged with the estimation of tropical phenology which is highly complex. Current modeled phenology is based on observations of temperate vegetation and accurate representation of tropical phenology is long overdue. Remote sensing (RS) data are a key tool in monitoring vegetation dynamics at regional and global scales. Of the many RS techniques available, time-series analysis of vegetation indices (VIs) has become the most common approach in monitoring vegetation phenology (Samanta et al. 2010, GRL; Bradley et al. 2011, GCB). Our research focuses on investigating the influence that age related variation in the spectral reflectance and physiochemical properties of leaves may have on VIs of tropical canopies. In order to do this, we collected a unique leaf and canopy phenological dataset at two different Amazonian sites: Inselberg, French Guyana (FG) and Tambopata, Peru (PE). Hyperspectral reflectance measurements were collected from 4,102 individual leaves sampled to represent different leaf ages and vertical canopy positions (top, mid and low canopy) from 20 different canopy tree species (8 in FG and 12 in PE). These leaf spectra were complemented with 1) leaf physical measurements: fresh and dry weight, area and thickness, LMA and LWC and 2) leaf chemical measurements: %N, %C, %P, C:N and d13C. Canopy level observations included top-of-canopy reflectance measurements obtained using a multispectral 16-band radiometer, leaf demography (tot. number and age distribution) and branch structural measurements (space between leaves, min. and max. season's growth and diameter) of two 1m branches harvested from each canopy level. Both leaf and canopy-level observations where collected monthly when trees where not in flush and weekly during the period of leaf flushing. Here, we present our leaf spectral and physiochemical results. Results show 1) changes in leaf spectral and physiochemical properties related to leaf age, 2) the most significant changes in the leaves' spectrum during different stages in their life cycle, and 3) how leaf spectral changes are related to changes in the chemical and physical properties of the leaves as they progress through their life cycle. Future work will involve the incorporation of leaf and canopy observations into a light canopy interaction model to investigate the possibility that seasonal variation in VIs may be driven by leaf aging as well as by the shedding or appearance of new leaves.

  13. Optimizing indoor illumination quality and energy efficiency using a spectrally tunable lighting system to augment natural daylight.

    PubMed

    Hertog, W; Llenas, A; Carreras, J

    2015-11-30

    This article demonstrates the benefits of complementing a daylight-lit environment with a spectrally tunable illumination system. The spectral components of daylight present in the room are measured by a low-cost miniature spectrophotometer and processed through a number of optimization algorithms, carefully trading color fidelity for energy efficiency. Spectrally-tunable luminaires provide only those wavelengths that ensure that either the final illumination spectrum inside the room is kept constant or carefully follows the dynamic spectral pattern of natural daylight. Analyzing the measured data proves that such a hybrid illumination system brings both unprecendented illumination quality and significant energy savings.

  14. Uniform high order spectral methods for one and two dimensional Euler equations

    NASA Technical Reports Server (NTRS)

    Cai, Wei; Shu, Chi-Wang

    1991-01-01

    Uniform high order spectral methods to solve multi-dimensional Euler equations for gas dynamics are discussed. Uniform high order spectral approximations with spectral accuracy in smooth regions of solutions are constructed by introducing the idea of the Essentially Non-Oscillatory (ENO) polynomial interpolations into the spectral methods. The authors present numerical results for the inviscid Burgers' equation, and for the one dimensional Euler equations including the interactions between a shock wave and density disturbance, Sod's and Lax's shock tube problems, and the blast wave problem. The interaction between a Mach 3 two dimensional shock wave and a rotating vortex is simulated.

  15. Extra-tropical QBO signals in angular momentum and wave forcing

    NASA Technical Reports Server (NTRS)

    Baldwin, Mark P.; Tung, Ka Kit

    1994-01-01

    Although the period of the equatorial stratospheric quasi-biennal oscillation (QBO) is approximately 30 months, quasi-biennial modulation of the extratropical annual cycle may be expected to produce additional spectral peaks at approximately to produce additional spectral peaks at approximately 8.6 and 20 months in the extratropics. Using Northern Hemisphere data for 1964-78 and global data for 1978-93 it is shown that these spectral peaks are robust in both angular momentum and Eliassen-Palm flux divergence. This spectral signature represents a circulation anomaly in both hemispheres, and implies a dynamical origin to the previously observed similar spectral peaks in column ozone in the extratropics.

  16. Spectral simplicity of apparent complexity. I. The nondiagonalizable metadynamics of prediction

    NASA Astrophysics Data System (ADS)

    Riechers, Paul M.; Crutchfield, James P.

    2018-03-01

    Virtually all questions that one can ask about the behavioral and structural complexity of a stochastic process reduce to a linear algebraic framing of a time evolution governed by an appropriate hidden-Markov process generator. Each type of question—correlation, predictability, predictive cost, observer synchronization, and the like—induces a distinct generator class. Answers are then functions of the class-appropriate transition dynamic. Unfortunately, these dynamics are generically nonnormal, nondiagonalizable, singular, and so on. Tractably analyzing these dynamics relies on adapting the recently introduced meromorphic functional calculus, which specifies the spectral decomposition of functions of nondiagonalizable linear operators, even when the function poles and zeros coincide with the operator's spectrum. Along the way, we establish special properties of the spectral projection operators that demonstrate how they capture the organization of subprocesses within a complex system. Circumventing the spurious infinities of alternative calculi, this leads in the sequel, Part II [P. M. Riechers and J. P. Crutchfield, Chaos 28, 033116 (2018)], to the first closed-form expressions for complexity measures, couched either in terms of the Drazin inverse (negative-one power of a singular operator) or the eigenvalues and projection operators of the appropriate transition dynamic.

  17. Comparative analysis of data quality and applications in vegetation of HJ-1A CCD images

    NASA Astrophysics Data System (ADS)

    Wei, Hongwei; Tian, Qingjiu; Huang, Yan; Wang, Yan

    2014-05-01

    To study the data quality and to find the differences in vegetation monitoring applications, the same region at Chuzhou Lai 'an, the data of HJ-1A CCD1 on the April 1st, 2012 and the data of HJ-1A CCD2 on the March 31, 2012 have being comparative analysis by the method of objective quality (image)assessment which selecting over five spectral image evaluation parameters: radiation precision (mean, variance, inclination, steepness), information entropy, signal-to-noise ratio, sharpness, contrast, and normalized differential vegetation index. The results show that there is little differences between the HJ-1A CCD1 and CCD2 by objective evaluation of data quality except radiation precision conform to their design theory, so the conclusion is that the difference of them without considering on the usual unless continuation;and Combination of field observation data Lai'an spectral data and GPS data (each point),selecting the normalized difference vegetation index as CCD1, CCD2 in vegetation monitoring application on the evaluation of the differences, and the specific process is based on GPS data is divided into nine small plots of spectral data ,and image data of nine one-to-one correspondence plots, and their normalized difference vegetation index values were calculated ,and measured spectra data resampling HJ-1A CCD1, CCD2 spectral response function calculated NDVI, and the results show that there is little differences between the HJ-1A CCD1 and CCD2 by objective evaluation of data quality, and, the differences of wheat `s reflection and normalized vegetation index is mainly due to calibration coefficients of CCD1 and CCD2, the differences of the solar elevation angle when obtaining the image and atmospheric conditions, so it has to consider the performance indicators as well as access conditions of CCD1 and CCD2, and to be take the normalization techniques for processing for the comparison analysis in the use of HJ-1A CCD Data to surface dynamic changes; Finally, in order to study the response of the spectral response function proposed spectral response function of impact factor, and in view of the spectral response function measured spectral data resampling only HJ-1A CCD spectral response function, calculated according to the formula of the equivalent reflectivity quantitative spectral response function, and spectral normalization of proposed theoretical Technical Support. The Objective evaluation of its application of HJ-1A CCD1, and CCD2 data quality differences research has important implications for broader application to further promote China-made remote sensing satellite data, future research also needs calibration coefficient, the solar elevation angle atmospheric conditions and its image scanning angle be taken into account, and to make the corresponding normalized its impact quantitative research has important significance for the timing changes in the application of the ecological environment in China.

  18. Rare-earth-doped materials with application to optical signal processing, quantum information science, and medical imaging technology

    NASA Astrophysics Data System (ADS)

    Cone, R. L.; Thiel, C. W.; Sun, Y.; Böttger, Thomas; Macfarlane, R. M.

    2012-02-01

    Unique spectroscopic properties of isolated rare earth ions in solids offer optical linewidths rivaling those of trapped single atoms and enable a variety of recent applications. We design rare-earth-doped crystals, ceramics, and fibers with persistent or transient "spectral hole" recording properties for applications including high-bandwidth optical signal processing where light and our solids replace the high-bandwidth portion of the electronics; quantum cryptography and information science including the goal of storage and recall of single photons; and medical imaging technology for the 700-900 nm therapeutic window. Ease of optically manipulating rare-earth ions in solids enables capturing complex spectral information in 105 to 108 frequency bins. Combining spatial holography and spectral hole burning provides a capability for processing high-bandwidth RF and optical signals with sub-MHz spectral resolution and bandwidths of tens to hundreds of GHz for applications including range-Doppler radar and high bandwidth RF spectral analysis. Simply stated, one can think of these crystals as holographic recording media capable of distinguishing up to 108 different colors. Ultra-narrow spectral holes also serve as a vibration-insensitive sub-kHz frequency reference for laser frequency stabilization to a part in 1013 over tens of milliseconds. The unusual properties and applications of spectral hole burning of rare earth ions in optical materials are reviewed. Experimental results on the promising Tm3+:LiNbO3 material system are presented and discussed for medical imaging applications. Finally, a new application of these materials as dynamic optical filters for laser noise suppression is discussed along with experimental demonstrations and theoretical modeling of the process.

  19. A Markovian Entropy Measure for the Analysis of Calcium Activity Time Series.

    PubMed

    Marken, John P; Halleran, Andrew D; Rahman, Atiqur; Odorizzi, Laura; LeFew, Michael C; Golino, Caroline A; Kemper, Peter; Saha, Margaret S

    2016-01-01

    Methods to analyze the dynamics of calcium activity often rely on visually distinguishable features in time series data such as spikes, waves, or oscillations. However, systems such as the developing nervous system display a complex, irregular type of calcium activity which makes the use of such methods less appropriate. Instead, for such systems there exists a class of methods (including information theoretic, power spectral, and fractal analysis approaches) which use more fundamental properties of the time series to analyze the observed calcium dynamics. We present a new analysis method in this class, the Markovian Entropy measure, which is an easily implementable calcium time series analysis method which represents the observed calcium activity as a realization of a Markov Process and describes its dynamics in terms of the level of predictability underlying the transitions between the states of the process. We applied our and other commonly used calcium analysis methods on a dataset from Xenopus laevis neural progenitors which displays irregular calcium activity and a dataset from murine synaptic neurons which displays activity time series that are well-described by visually-distinguishable features. We find that the Markovian Entropy measure is able to distinguish between biologically distinct populations in both datasets, and that it can separate biologically distinct populations to a greater extent than other methods in the dataset exhibiting irregular calcium activity. These results support the benefit of using the Markovian Entropy measure to analyze calcium dynamics, particularly for studies using time series data which do not exhibit easily distinguishable features.

  20. Continuous non-invasive blood glucose monitoring by spectral image differencing method

    NASA Astrophysics Data System (ADS)

    Huang, Hao; Liao, Ningfang; Cheng, Haobo; Liang, Jing

    2018-01-01

    Currently, the use of implantable enzyme electrode sensor is the main method for continuous blood glucose monitoring. But the effect of electrochemical reactions and the significant drift caused by bioelectricity in body will reduce the accuracy of the glucose measurements. So the enzyme-based glucose sensors need to be calibrated several times each day by the finger-prick blood corrections. This increases the patient's pain. In this paper, we proposed a method for continuous Non-invasive blood glucose monitoring by spectral image differencing method in the near infrared band. The method uses a high-precision CCD detector to switch the filter in a very short period of time, obtains the spectral images. And then by using the morphological method to obtain the spectral image differences, the dynamic change of blood sugar is reflected in the image difference data. Through the experiment proved that this method can be used to monitor blood glucose dynamically to a certain extent.

  1. Characterizing measles transmission in India: a dynamic modeling study using verbal autopsy data.

    PubMed

    Verguet, Stéphane; Jones, Edward O; Johri, Mira; Morris, Shaun K; Suraweera, Wilson; Gauvreau, Cindy L; Jha, Prabhat; Jit, Mark

    2017-08-10

    Decreasing trends in measles mortality have been reported in recent years. However, such estimates of measles mortality have depended heavily on assumed regional measles case fatality risks (CFRs) and made little use of mortality data from low- and middle-income countries in general and India, the country with the highest measles burden globally, in particular. We constructed a dynamic model of measles transmission in India with parameters that were empirically inferred using spectral analysis from a time series of measles mortality extracted from the Million Death Study, an ongoing longitudinal study recording deaths across 2.4 million Indian households and attributing causes of death using verbal autopsy. The model was then used to estimate the measles CFR, the number of measles deaths, and the impact of vaccination in 2000-2015 among under-five children in India and in the states of Bihar and Uttar Pradesh (UP), two states with large populations and the highest numbers of measles deaths in India. We obtained the following estimated CFRs among under-five children for the year 2005: 0.63% (95% confidence interval (CI): 0.40-1.00%) for India as a whole, 0.62% (0.38-1.00%) for Bihar, and 1.19% (0.80-1.75%) for UP. During 2000-2015, we estimated that 607,000 (95% CI: 383,000-958,000) under-five deaths attributed to measles occurred in India as a whole. If no routine vaccination or supplemental immunization activities had occurred from 2000 to 2015, an additional 1.6 (1.0-2.6) million deaths for under-five children would have occurred across India. We developed a data- and model-driven estimation of the historical measles dynamics, CFR, and vaccination impact in India, extracting the periodicity of epidemics using spectral and coherence analysis, which allowed us to infer key parameters driving measles transmission dynamics and mortality.

  2. Observational study on the fine structure and dynamics of a solar jet. II. Energy release process revealed by spectral analysis

    NASA Astrophysics Data System (ADS)

    Sakaue, Takahito; Tei, Akiko; Asai, Ayumi; Ueno, Satoru; Ichimoto, Kiyoshi; Shibata, Kazunari

    2018-01-01

    We report on a solar jet phenomenon associated with the C5.4 class flare on 2014 November 11. The data of the jet was provided by the Solar Dynamics Observatory, the X-Ray Telescope (XRT) aboard Hinode, and the Interface Region Imaging Spectrograph and Domeless Solar Telescope (DST) at Hida Observatory, Kyoto University. These plentiful data enabled us to present this series of papers to discuss all the processes of the observed phenomena, including energy storage, event trigger, and energy release. In this paper, we focus on the energy release process of the observed jet, and mainly describe our spectral analysis on the Hα data of DST to investigate the internal structure of the Hα jet and its temporal evolution. This analysis reveals that in the physical quantity distributions of the Hα jet, such as line-of-sight velocity and optical thickness, there is a significant gradient in the direction crossing the jet. We interpret this internal structure as the consequence of the migration of the energy release site, based on the idea of ubiquitous reconnection. Moreover, by measuring the horizontal flow of the fine structures in the jet, we succeeded in deriving the three-dimensional velocity field and the line-of-sight acceleration field of the Hα jet. The analysis result indicates that part of the ejecta in the Hα jet experienced additional acceleration after it had been ejected from the lower atmosphere. This secondary acceleration was found to occur in the vicinity of the intersection between the trajectories of the Hα jet and the X-ray jet observed by Hinode/XRT. We propose that a fundamental cause of this phenomenon is magnetic reconnection involving the plasmoid in the observed jet.

  3. Adjoint Sensitivity Analysis for Scale-Resolving Turbulent Flow Solvers

    NASA Astrophysics Data System (ADS)

    Blonigan, Patrick; Garai, Anirban; Diosady, Laslo; Murman, Scott

    2017-11-01

    Adjoint-based sensitivity analysis methods are powerful design tools for engineers who use computational fluid dynamics. In recent years, these engineers have started to use scale-resolving simulations like large-eddy simulations (LES) and direct numerical simulations (DNS), which resolve more scales in complex flows with unsteady separation and jets than the widely-used Reynolds-averaged Navier-Stokes (RANS) methods. However, the conventional adjoint method computes large, unusable sensitivities for scale-resolving simulations, which unlike RANS simulations exhibit the chaotic dynamics inherent in turbulent flows. Sensitivity analysis based on least-squares shadowing (LSS) avoids the issues encountered by conventional adjoint methods, but has a high computational cost even for relatively small simulations. The following talk discusses a more computationally efficient formulation of LSS, ``non-intrusive'' LSS, and its application to turbulent flows simulated with a discontinuous-Galkerin spectral-element-method LES/DNS solver. Results are presented for the minimal flow unit, a turbulent channel flow with a limited streamwise and spanwise domain.

  4. Monochromatic X-ray-induced thermal effect on four-reflection “nested” meV-monochromators: dynamical diffraction theory and finite-element analysis

    NASA Astrophysics Data System (ADS)

    Hu, Ling-Fei; Gao, Li-Dan; Li, Zhen-Jie; Wang, Shan-Feng; Sheng, Wei-Fan; Liu, Peng; Xu, Wei

    2015-09-01

    The high energy resolution monochromator (HRM) is widely used in inelastic scattering programs to detect phonons with energy resolution, down to the meV level. Although the large amount of heat from insertion devices can be reduced by a high heat-load monochromator, the unbalanced heat load on the inner pair of crystals in a nested HRM can affect its overall performance. Here, a theoretical analysis of the unbalanced heat load using dynamical diffraction theory and finite element analysis is presented. By utilizing the ray-tracing method, the performance of different HRM nesting configurations is simulated. It is suggested that the heat balance ratio, energy resolution, and overall spectral transmission efficiency are the figures of merit for evaluating the performance of nested HRMs. Although the present study is mainly focused on nested HRMs working at 57Fe nuclear resonant energy at 14.4 keV, it is feasible to extend this to other nested HRMs working at different energies.

  5. Environmental Electrometry with Luminescent Carbon Nanotubes.

    PubMed

    Noé, Jonathan C; Nutz, Manuel; Reschauer, Jonathan; Morell, Nicolas; Tsioutsios, Ioannis; Reserbat-Plantey, Antoine; Watanabe, Kenji; Taniguchi, Takashi; Bachtold, Adrian; Högele, Alexander

    2018-06-25

    We demonstrate that localized excitons in luminescent carbon nanotubes can be utilized to study electrostatic fluctuations in the nanotube environment with sensitivity down to the elementary charge. By monitoring the temporal evolution of the cryogenic photoluminescence from individual carbon nanotubes grown on silicon oxide and hexagonal boron nitride, we characterize the dynamics of charge trap defects for both dielectric supports. We find a one order of magnitude reduction in the photoluminescence spectral wandering for nanotubes on extended atomically flat terraces of hexagonal boron nitride. For nanotubes on hexagonal boron nitride with pronounced spectral fluctuations, our analysis suggests proximity to terrace ridges where charge fluctuators agglomerate to exhibit areal densities exceeding those of silicon oxide. Our results establish carbon nanotubes as sensitive probes of environmental charge fluctuations and highlight their potential for applications in electrometric nanodevices with all-optical readout.

  6. Spectrally Resolved Fiber Photometry for Multi-component Analysis of Brain Circuits.

    PubMed

    Meng, Chengbo; Zhou, Jingheng; Papaneri, Amy; Peddada, Teja; Xu, Karen; Cui, Guohong

    2018-04-25

    To achieve simultaneous measurement of multiple cellular events in molecularly defined groups of neurons in vivo, we designed a spectrometer-based fiber photometry system that allows for spectral unmixing of multiple fluorescence signals recorded from deep brain structures in behaving animals. Using green and red Ca 2+ indicators differentially expressed in striatal direct- and indirect-pathway neurons, we were able to simultaneously monitor the neural activity in these two pathways in freely moving animals. We found that the activities were highly synchronized between the direct and indirect pathways within one hemisphere and were desynchronized between the two hemispheres. We further analyzed the relationship between the movement patterns and the magnitude of activation in direct- and indirect-pathway neurons and found that the striatal direct and indirect pathways coordinately control the dynamics and fate of movement. Published by Elsevier Inc.

  7. Peculiarities of spike multimode generation of a superradiant distributed feedback laser

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kocharovskaya, E R; Ginzburg, N S; Sergeev, A S

    2011-08-31

    Using one-dimensional semiclassical Maxwell - Bloch equations with account for the coherent polarisation dynamics, we have studied spike generation regimes of a superradiant distributed feedback laser in the case of inhomogeneous broadening of the spectral line of an active medium. By analysing the dynamic spectra of inversion of the active medium and laser radiation, we have revealed the relationship of individual spikes of radiation and their modulation with specific parts in the spectral line of the active medium and mode beatings. It has been shown that the broadening and shift of the lasing spectrum with respect to the initial electromagneticmore » Bragg-cavity modes is accompanied by a strong spectral gradient of inversion that is typical of the superradiant regimes. (control of radiation parameters)« less

  8. Extracting Damping Ratio from Dynamic Data and Numerical Solutions

    NASA Technical Reports Server (NTRS)

    Casiano, M. J.

    2016-01-01

    There are many ways to extract damping parameters from data or models. This Technical Memorandum provides a quick reference for some of the more common approaches used in dynamics analysis. Described are six methods of extracting damping from data: the half-power method, logarithmic decrement (decay rate) method, an autocorrelation/power spectral density fitting method, a frequency response fitting method, a random decrement fitting method, and a newly developed half-quadratic gain method. Additionally, state-space models and finite element method modeling tools, such as COMSOL Multiphysics (COMSOL), provide a theoretical damping via complex frequency. Each method has its advantages which are briefly noted. There are also likely many other advanced techniques in extracting damping within the operational modal analysis discipline, where an input excitation is unknown; however, these approaches discussed here are objective, direct, and can be implemented in a consistent manner.

  9. Multi-water-bag models of ion temperature gradient instability in cylindrical geometry

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Coulette, David; Besse, Nicolas

    2013-05-15

    Ion temperature gradient instabilities play a major role in the understanding of anomalous transport in core fusion plasmas. In the considered cylindrical geometry, ion dynamics is described using a drift-kinetic multi-water-bag model for the parallel velocity dependency of the ion distribution function. In a first stage, global linear stability analysis is performed. From the obtained normal modes, parametric dependencies of the main spectral characteristics of the instability are then examined. Comparison of the multi-water-bag results with a reference continuous Maxwellian case allows us to evaluate the effects of discrete parallel velocity sampling induced by the Multi-Water-Bag model. Differences between themore » global model and local models considered in previous works are discussed. Using results from linear, quasilinear, and nonlinear numerical simulations, an analysis of the first stage saturation dynamics of the instability is proposed, where the divergence between the three models is examined.« less

  10. Bright discrete solitons in spatially modulated DNLS systems

    DOE PAGES

    Kevrekidis, P. G.; Horne, R. L.; Whitaker, N.; ...

    2015-08-04

    In the present work, we revisit the highly active research area of inhomogeneously nonlinear defocusing media and consider the existence, spectral stability and nonlinear dynamics of bright solitary waves in them. We use the anti-continuum limit of vanishing coupling as the starting point of our analysis, enabling in this way a systematic characterization of the branches of solutions. Our stability findings and bifurcation characteristics reveal the enhanced robustness and wider existence intervals of solutions with a broader support, culminating in the 'extended' solution in which all sites are excited. Our eigenvalue predictions are corroborated by numerical linear stability analysis. Inmore » conclusion, the dynamics also reveal a tendency of the solution profiles to broaden, in line with the above findings. These results pave the way for further explorations of such states in discrete systems, including in higher dimensional settings.« less

  11. Phase-locking dynamics in optoelectronic oscillator

    NASA Astrophysics Data System (ADS)

    Banerjee, Abhijit; Sarkar, Jayjeet; Das, NikhilRanjan; Biswas, Baidyanath

    2018-05-01

    This paper analyzes the phase-locking phenomenon in single-loop optoelectronic microwave oscillators considering weak and strong radio frequency (RF) signal injection. The analyses are made in terms of the lock-range, beat frequency and the spectral components of the unlocked-driven oscillator. The influence of RF injection signal on the frequency pulling of the unlocked-driven optoelectronic oscillator (OEO) is also studied. An approximate expression for the amplitude perturbation of the oscillator is derived and the influence of amplitude perturbation on the phase-locking dynamics is studied. It is shown that the analysis clearly reveals the phase-locking phenomenon and the associated frequency pulling mechanism starting from the fast-beat state through the quasi-locked state to the locked state of the pulled OEO. It is found that the unlocked-driven OEO output signal has a very non-symmetrical sideband distribution about the carrier. The simulation results are also given in partial support to the conclusions of the analysis.

  12. Geotechnical Site Investigation Using S-waves with Implications for Ground Motion Analysis

    NASA Astrophysics Data System (ADS)

    Hassan, Bilal; Butt, Stephen D.; Hurich, Charles A.

    2017-12-01

    Evaluation results of shear wave attenuation-based ground motion restricted by fracture orientation and rheology, from among those of an extended experimental study, are presented herein. The issues of competence of fractured bedrock dynamically disturbed multilaterally are assessed. Disturbance is primarily modelled by Sh and Sv stimulation, given fracture orientation, while subjected to direct fracture stress regime conditions varying in time. Hence, directionalities of polarisation and stress are taken into consideration simultaneously following simple site-specific non-erodetic approach. Comparison of spectral curves and spectral ratio curves of attenuation with respect to variations of direction and stress emphasise the amplification of the `seismic response' in one direction compared to the other, i.e. vertical vs. horizontal, in terms of weighing possibilities of or predicting structural integrity against failure. The composite analyses of multiple spectral curves not only enable determination of the orientation of the fracture set/s in space but also allow inferring the nature of more amplified response perpendicular to the crack surface compared to that of a response parallel to the crack surface.

  13. Geocoronal structure. 3. Optically thin, Doppler-broadened line profiles

    NASA Astrophysics Data System (ADS)

    Bishop, James; Chamberlain, Joseph W.

    1987-11-01

    Theoretical line profiles, applicable to the analysis of geocoronal Hα prifile measurements, are presented for illustrative cases. While retaining a number of simplifications (classical exobase and diffusive equilibrium plasmasphere conditions), distinctive spectral signatures of mechanisms governing the geocorona are isolated. Examining the consequences of solar radiation pressure dynamics is the main point here. In the prototype evaporative case, radiation pressure acts to form narrow profiles via the creation of an extensive quasi-satellite component. Comparison with a simple extension of the earlier analytic theory discloses the influence of an exopause in this regard. The main modifications to evaporative spectral shapes in the geocoronal application, for shadow heights greater than 2 RE, are predicted to be (1) a blueward ``shift'' or bias near line center, for look directions parallel to the antisolar axis, generated by loss mechanisms acting over the time of flight of exospheric constituents (for example, solar ionization) and (2) an enhanced redward wing at spectral displacements exceeding that defined by the shadow height escape speed, produced by plasmaspheric charge exchange collisions. Implications of these results for recent observations of geocoronal Hα line profiles are briefly discussed.

  14. Optical decoherence studies of Tm3 +:Y3Ga5O12

    NASA Astrophysics Data System (ADS)

    Thiel, C. W.; Sinclair, N.; Tittel, W.; Cone, R. L.

    2014-12-01

    Decoherence of the 795 nm 3H6 to 3H4 transition in 1 %Tm3 +:Y3Ga5O12 (Tm:YGG) is studied at temperatures as low as 1.2 K. The temperature, magnetic field, frequency, and time scale (spectral diffusion) dependence of the optical coherence lifetime is measured. Our results show that the coherence lifetime is impacted less by spectral diffusion than other known thulium-doped materials. Photon echo excitation and spectral hole burning methods reveal uniform decoherence properties and the possibility to produce full transparency for persistent spectral holes across the entire 56 GHz inhomogeneous bandwidth of the optical transition. Temperature-dependent decoherence is well described by elastic Raman scattering of phonons with an additional weaker component that may arise from a low density of glass-like dynamic disorder modes (two-level systems). Analysis of the observed behavior suggests that an optical coherence lifetime approaching 1 ms may be possible in this system at temperatures below 1 K for crystals grown with optimized properties. Overall, we find that Tm:YGG has superior decoherence properties compared to other Tm-doped crystals and is a promising candidate for applications that rely on long coherence lifetimes, such as optical quantum memories and photonic signal processing.

  15. Hybrid least squares multivariate spectral analysis methods

    DOEpatents

    Haaland, David M.

    2002-01-01

    A set of hybrid least squares multivariate spectral analysis methods in which spectral shapes of components or effects not present in the original calibration step are added in a following estimation or calibration step to improve the accuracy of the estimation of the amount of the original components in the sampled mixture. The "hybrid" method herein means a combination of an initial classical least squares analysis calibration step with subsequent analysis by an inverse multivariate analysis method. A "spectral shape" herein means normally the spectral shape of a non-calibrated chemical component in the sample mixture but can also mean the spectral shapes of other sources of spectral variation, including temperature drift, shifts between spectrometers, spectrometer drift, etc. The "shape" can be continuous, discontinuous, or even discrete points illustrative of the particular effect.

  16. Ultrahigh resolution photographic films for X-ray/EUV/FUV astronomy

    NASA Technical Reports Server (NTRS)

    Hoover, Richard B.; Walker, Arthur B. C., Jr.; Deforest, Craig E.; Watts, Richard; Tarrio, Charles

    1993-01-01

    The quest for ultrahigh resolution full-disk images of the sun at soft X-ray/EUV/FUV wavelengths has increased the demand for photographic films with broad spectral sensitivity, high spatial resolution, and wide dynamic range. These requirements were made more stringent by the recent development of multilayer telescopes and coronagraphs capable of operating at normal incidence at soft X-ray/EUV wavelengths. Photographic films are the only detectors now available with the information storage capacity and dynamic range such as is required for recording images of the solar disk and corona simultaneously with sub arc second spatial resolution. During the Stanford/MSFC/LLNL Rocket X-Ray Spectroheliograph and Multi-Spectral Solar Telescope Array (MSSTA) programs, we utilized photographic films to obtain high resolution full-disk images of the sun at selected soft X-ray/EUV/FUV wavelengths. In order to calibrate our instrumentation for quantitative analysis of our solar data and to select the best emulsions and processing conditions for the MSSTA reflight, we recently tested several photographic films. These studies were carried out at the NIST SURF II synchrotron and the Stanford Synchrotron Radiation Laboratory. In this paper, we provide the results of those investigations.

  17. Analysis of terrestrial conditions and dynamics

    NASA Technical Reports Server (NTRS)

    Goward, S. N. (Principal Investigator)

    1984-01-01

    Land spectral reflectance properties for selected locations, including the Goddard Space Flight Center, the Wallops Flight Facility, a MLA test site in Cambridge, Maryland, and an acid test site in Burlington, Vermont, were measured. Methods to simulate the bidirectional reflectance properties of vegetated landscapes and a data base for spatial resolution were developed. North American vegetation patterns observed with the Advanced Very High Resolution Radiometer were assessed. Data and methods needed to model large-scale vegetation activity with remotely sensed observations and climate data were compiled.

  18. Spectral Structure Of Phase-Induced Intensity Noise In Recirculating Delay Lines

    NASA Astrophysics Data System (ADS)

    Tur, M.; Moslehi, B.; Bowers, J. E.; Newton, S. A.; Jackson, K. P.; Goodman, J. W.; Cutler, C. C.; Shaw, H. J.

    1983-09-01

    The dynamic range of fiber optic signal processors driven by relatively incoherent multimode semiconductor lasers is shown to be severely limited by laser phase-induced noise. It is experimentally demonstrated that while the noise power spectrum of differential length fiber filters is approximately flat, processors with recirculating loops exhibit noise with a periodically structured power spectrum with notches at zero frequency as well as at all other multiples of 1/(loop delay). The experimental results are aug-mented by a theoretical analysis.

  19. An Introduction to Turbulent Flow

    NASA Astrophysics Data System (ADS)

    Mathieu, Jean; Scott, Julian

    2000-06-01

    In recent years, turbulence has become a very lively area of scientific research and application, attracting many newcomers who need a basic introduction to the subject. Turbulent Flows ably meets this need, developing both physical insight and the mathematical framework needed to express the theory. The authors present basic theory and illustrate it with examples of simple turbulent flows and classical models of jets, wakes, and boundary layers. A deeper understanding of turbulence dynamics is provided by their treatment of spectral analysis and its applications.

  20. Normal Mode Analysis of Ambient-Noise Induced Free Oscillations of a Slender Medieval Masonry Tower in Bologna (Italy)

    NASA Astrophysics Data System (ADS)

    Morelli, A.; Azzara, R. M.; Cavaliere, A.; Zaccarelli, L.

    2014-12-01

    Analysis of the oscillations of buildings — either excited by earthquakes or by ambient noise — has become an effective tool to evaluate the response of such structures to strong ground motion, and hence to assess their seismic vulnerability. Response to small-amplitude ground motion may also provide crucial information on the elastic and anelastic properties of a structure — essential in the case of historical buildings — and constrain numerical full dynamic structural analyses. We report about an analysis carried out for a tall medieval monumental building in the urban center of the Norther Italian city of Bologna. Seismic monitoring, carried on for six months using field seismic instrumentation, has revealed the response to ambient noise, and has allowed to reconstruct, with high detail, the free oscillation modes of the tower. At 97 meters, the XII-century tower of the Asinelli is the tallest masonry building in Europe, and the most slender. We measured the fundamental, and several higher-order, flexural normal modes of oscillation, as well as the fundamental torsional mode. Asymmetry due to non-coincidence of centers of mass and of stiffness produces slightly different modal frequencies of oscillation in two orthogonal directions, consistently with dynamical modeling. Horizontal particle-motion polarization plots show the cyclic energy transfer between two degrees of freedom of the system. The Asinelli spectral signature can also be easily recognized in the motion recorded at the base of nearby Garisenda. We verify that there is correlation of spectral amplitudes with time of the day — in agreement with expected time-variance of anthropic disturbance —- but also with wind velocity and, intriguingly, with temperature variations inside the buidings. We are using these data to adjust the numerical dynamical models of the buildings, to examine time variations of behavior, and to identify the origin of anthropogenic sources of vibration in view of their possible mitigation.

  1. Combining EPR spectroscopy and X-ray crystallography to elucidate the structure and dynamics of conformationally constrained spin labels in T4 lysozyme single crystals.

    PubMed

    Consentius, Philipp; Gohlke, Ulrich; Loll, Bernhard; Alings, Claudia; Heinemann, Udo; Wahl, Markus C; Risse, Thomas

    2017-08-09

    Electron paramagnetic resonance (EPR) spectroscopy in combination with site-directed spin labeling is used to investigate the structure and dynamics of conformationally constrained spin labels in T4 lysozyme single crystals. Within a single crystal, the oriented ensemble of spin bearing moieties results in a strong angle dependence of the EPR spectra. A quantitative description of the EPR spectra requires the determination of the unit cell orientation with respect to the sample tube and the orientation of the spin bearing moieties within the crystal lattice. Angle dependent EPR spectra were analyzed by line shape simulations using the stochastic Liouville equation approach developed by Freed and co-workers and an effective Hamiltonian approach. The gain in spectral information obtained from the EPR spectra of single crystalline samples taken at different frequencies, namely the X-band and Q-band, allows us to discriminate between motional models describing the spectra of isotropic solutions similarly well. In addition, it is shown that the angle dependent single crystal spectra allow us to identify two spin label rotamers with very similar side chain dynamics. These results demonstrate the utility of single crystal EPR spectroscopy in combination with spectral line shape simulation techniques to extract valuable dynamic information not readily available from the analysis of isotropic systems. In addition, it will be shown that the loss of electron density in high resolution diffraction experiments at room temperature does not allow us to conclude that there is significant structural disorder in the system.

  2. Wide-spectral/dynamic-range skin-compatible phototransistors enabled by floated heterojunction structures with surface functionalized SWCNTs and amorphous oxide semiconductors.

    PubMed

    Hwang, Insik; Kim, Jaehyun; Lee, Minkyung; Lee, Min-Wook; Kim, Hee-Joong; Kwon, Hyuck-In; Hwang, Do Kyung; Kim, Myunggil; Yoon, Haeyoung; Kim, Yong-Hoon; Park, Sung Kyu

    2017-11-09

    Purified semiconducting single-walled carbon nanotubes (sc-SWCNTs) have been researched for optoelectronic applications due to their high absorption coefficient from the visible to even the near-infrared (NIR) region. Nevertheless, the insufficient electrical characteristics and incompatibility with conventional CMOS processing have limited their wide utilization in this emerging field. Here, we demonstrate highly detective and wide spectral/dynamic range phototransistors incorporating floated heterojunction active layers which are composed of low-temperature sol-gel processed n-type amorphous indium gallium zinc oxide (a-IGZO) stacked with a purified p-type sc-SWCNT layer. To achieve a high and broad spectral/dynamic range photo-response of the heterogeneous transistors, photochemically functionalized sc-SWCNT layers were carefully implemented onto the a-IGZO channel area with a floating p-n heterojunction active layer, resulting in the suppression of parasitic charge leakage and good bias driven opto-electrical properties. The highest photosensitivity (R) of 9.6 × 10 2 A W -1 and a photodetectivity (D*) of 4 × 10 14 Jones along with a dynamic range of 100-180 dB were achieved for our phototransistor in the spectral range of 400-780 nm including continuous and minimal frequency independent behaviors. More importantly, to demonstrate the diverse application of the ultra-flexible hybrid photosensor platform as skin compatible electronics, the sc-SWCNT/a-IGZO phototransistors were fabricated on an ultra-thin (∼1 μm) polyimide film along with a severe static and dynamic electro-mechanical test. The skin-like phototransistors showed excellent mechanical stability such as sustainable good electrical performance and high photosensitivity in a wide dynamic range without any visible cracks or damage and little noise interference after being rolled-up on the 150 μm-thick optical fiber as well as more than 1000 times cycling.

  3. Single-shot spectroscopy of broadband Yb fiber laser

    NASA Astrophysics Data System (ADS)

    Suzuki, Masayuki; Yoneya, Shin; Kuroda, Hiroto

    2017-02-01

    We have experimentally reported on a real-time single-shot spectroscopy of a broadband Yb-doped fiber (YDF) laser which based on a nonlinear polarization evolution by using a time-stretched dispersive Fourier transformation technique. We have measured an 8000 consecutive single-shot spectra of mode locking and noise-like pulse (NLP), because our developed broadband YDF oscillator can individually operate the mode locking and NLP by controlling a pump LD power and angle of waveplates. A shot-to-shot spectral fluctuation was observed in NLP. For the investigation of pulse formation dynamics, we have measured the spectral evolution in an initial fluctuations of mode locked broadband YDF laser at an intracavity dispersion of 1500 and 6200 fs2 for the first time. In both case, a build-up time between cw and steady-state mode locking was estimated to be 50 us, the dynamics of spectral evolution between cw and mode locking, however, was completely different. A shot-to-shot strong spectral fluctuation, as can be seen in NLP spectra, was observed in the initial timescale of 20 us at the intracavity dispersion of 1500 fs2. These new findings would impact on understanding the birth of the broadband spectral formation in fiber laser oscillator.

  4. Broadband radio jet emission and variability of γ-ray blazars

    NASA Astrophysics Data System (ADS)

    Nestoras, Ioannis

    2015-07-01

    AGN (Active Galactic Nuclei) and in particular their subclass blazars, are among the most energetic objects observed in the universe, featuring extreme phenomenological characteristics such as rapid broadband flux density and polarization variability, fast super--luminal motion, high degree of polarization and a broadband, double-humped spectral energy distribution (SED). The details of the emission processes and violent variability of blazars are still poorly understood. Variability studies give important clues about the size, structure, physics and dynamics of the emitting region making AGN/blazar monitoring programs of uttermost importance in providing the necessary constraints for understanding the origin of energy production. In this framework the F-gamma program was initiated, monitoring monthly 60 fermi detected AGN/blazars at 12 frequencies between 2.6 and 345GHz since 2007. For the thesis in hand observations and data analysis were performed within the realms of the F-gamma program, using the Effelsberg (EB) 100m and Pico Veleta (PV) 30m telescopes at 10 frequency bands ranging from 2.64 to 142GHz. The cm to short-mm variability/spectral characteristics are monitored for a sample of 59 sources for a period of five years enabling for the first time a detailed study of the observed flaring activity in both the light curve and spectral domains for such a large number of sources and such high cadence. Also the observing systems and methods are introduced as well as the data reduction techniques. The thesis at hand is structured as follows: Chapter 3 presents the reduction methods and post measurement corrections applied to the data such as pointing offsets, gain--elevation and sensitivity corrections as well as specific corrections applied for each of the Effelsberg and Pico Veleta observing systems respectively. Chapter 4 presents the analysis tools and methods that were used such as: variability characteristics, flare amplitudes with a new method for estimating the intrinsic standard deviation, flare time scales using Structure Function analysis, spectral indices and spectral peak estimations. Chapter 5 presents the results of the analysis performed upon the five year light curves. The significance of variability through a x^2 test is estimated as well as the flare amplitudes using the intrinsic variability of the light curves along with a new proposed k--index. The introduction of the k--index enables the characterization of the observed variability amplitudes across frequency, thus permitting us to limit the parameter space of various physical models. Also flare time scales, brightness temperatures and Doppler factors are reported. Chapter 6 presents the corresponding analysis in the spectral domain, including results for spectral indices and an S_max - v_max analysis. By determining the spectral peak of every spectra for a selected number of sources, it is possible to track the evolution of the flaring activity in the S_max - v_max plane, enabling us to discriminate between different underlying physical mechanisms that are in action. Finally Chapter 7 includes the overall discussion and a summary of results obtained.

  5. Intrinsic fluorescence spectroscopy of glutamate dehydrogenase: Integrated behavior and deconvolution analysis

    NASA Astrophysics Data System (ADS)

    Pompa, P. P.; Cingolani, R.; Rinaldi, R.

    2003-07-01

    In this paper, we present a deconvolution method aimed at spectrally resolving the broad fluorescence spectra of proteins, namely, of the enzyme bovine liver glutamate dehydrogenase (GDH). The analytical procedure is based on the deconvolution of the emission spectra into three distinct Gaussian fluorescing bands Gj. The relative changes of the Gj parameters are directly related to the conformational changes of the enzyme, and provide interesting information about the fluorescence dynamics of the individual emitting contributions. Our deconvolution method results in an excellent fitting of all the spectra obtained with GDH in a number of experimental conditions (various conformational states of the protein) and describes very well the dynamics of a variety of phenomena, such as the dependence of hexamers association on protein concentration, the dynamics of thermal denaturation, and the interaction process between the enzyme and external quenchers. The investigation was carried out by means of different optical experiments, i.e., native enzyme fluorescence, thermal-induced unfolding, and fluorescence quenching studies, utilizing both the analysis of the “average” behavior of the enzyme and the proposed deconvolution approach.

  6. Extended applications of track irregularity probabilistic model and vehicle-slab track coupled model on dynamics of railway systems

    NASA Astrophysics Data System (ADS)

    Xu, Lei; Zhai, Wanming; Gao, Jianmin

    2017-11-01

    Track irregularities are inevitably in a process of stochastic evolution due to the uncertainty and continuity of wheel-rail interactions. For depicting the dynamic behaviours of vehicle-track coupling system caused by track random irregularities thoroughly, it is a necessity to develop a track irregularity probabilistic model to simulate rail surface irregularities with ergodic properties on amplitudes, wavelengths and probabilities, and to build a three-dimensional vehicle-track coupled model by properly considering the wheel-rail nonlinear contact mechanisms. In the present study, the vehicle-track coupled model is programmed by combining finite element method with wheel-rail coupling model firstly. Then, in light of the capability of power spectral density (PSD) in characterising amplitudes and wavelengths of stationary random signals, a track irregularity probabilistic model is presented to reveal and simulate the whole characteristics of track irregularity PSD. Finally, extended applications from three aspects, that is, extreme analysis, reliability analysis and response relationships between dynamic indices, are conducted to the evaluation and application of the proposed models.

  7. Scaling Behavior in Mitochondrial Redox Fluctuations

    PubMed Central

    Ramanujan, V. Krishnan; Biener, Gabriel; Herman, Brian A.

    2006-01-01

    Scale-invariant long-range correlations have been reported in fluctuations of time-series signals originating from diverse processes such as heart beat dynamics, earthquakes, and stock market data. The common denominator of these apparently different processes is a highly nonlinear dynamics with competing forces and distinct feedback species. We report for the first time an experimental evidence for scaling behavior in NAD(P)H signal fluctuations in isolated mitochondria and intact cells isolated from the liver of a young (5-month-old) mouse. Time-series data were collected by two-photon imaging of mitochondrial NAD(P)H fluorescence and signal fluctuations were quantitatively analyzed for statistical correlations by detrended fluctuation analysis and spectral power analysis. Redox [NAD(P)H / NAD(P)+] fluctuations in isolated mitochondria and intact liver cells were found to display nonrandom, long-range correlations. These correlations are interpreted as arising due to the regulatory dynamics operative in Krebs' cycle enzyme network and electron transport chain in the mitochondria. This finding may provide a novel basis for understanding similar regulatory networks that govern the nonequilibrium properties of living cells. PMID:16565066

  8. Heterodyne detection using spectral line pairing for spectral phase encoding optical code division multiple access and dynamic dispersion compensation.

    PubMed

    Yang, Yi; Foster, Mark; Khurgin, Jacob B; Cooper, A Brinton

    2012-07-30

    A novel coherent optical code-division multiple access (OCDMA) scheme is proposed that uses spectral line pairing to generate signals suitable for heterodyne decoding. Both signal and local reference are transmitted via a single optical fiber and a simple balanced receiver performs sourceless heterodyne detection, canceling speckle noise and multiple-access interference (MAI). To validate the idea, a 16 user fully loaded phase encoded system is simulated. Effects of fiber dispersion on system performance are studied as well. Both second and third order dispersion management is achieved by using a spectral phase encoder to adjust phase shifts of spectral components at the optical network unit (ONU).

  9. Experimental/analytical approaches to modeling, calibrating and optimizing shaking table dynamics for structural dynamic applications

    NASA Astrophysics Data System (ADS)

    Trombetti, Tomaso

    This thesis presents an Experimental/Analytical approach to modeling and calibrating shaking tables for structural dynamic applications. This approach was successfully applied to the shaking table recently built in the structural laboratory of the Civil Engineering Department at Rice University. This shaking table is capable of reproducing model earthquake ground motions with a peak acceleration of 6 g's, a peak velocity of 40 inches per second, and a peak displacement of 3 inches, for a maximum payload of 1500 pounds. It has a frequency bandwidth of approximately 70 Hz and is designed to test structural specimens up to 1/5 scale. The rail/table system is mounted on a reaction mass of about 70,000 pounds consisting of three 12 ft x 12 ft x 1 ft reinforced concrete slabs, post-tensioned together and connected to the strong laboratory floor. The slip table is driven by a hydraulic actuator governed by a 407 MTS controller which employs a proportional-integral-derivative-feedforward-differential pressure algorithm to control the actuator displacement. Feedback signals are provided by two LVDT's (monitoring the slip table relative displacement and the servovalve main stage spool position) and by one differential pressure transducer (monitoring the actuator force). The dynamic actuator-foundation-specimen system is modeled and analyzed by combining linear control theory and linear structural dynamics. The analytical model developed accounts for the effects of actuator oil compressibility, oil leakage in the actuator, time delay in the response of the servovalve spool to a given electrical signal, foundation flexibility, and dynamic characteristics of multi-degree-of-freedom specimens. In order to study the actual dynamic behavior of the shaking table, the transfer function between target and actual table accelerations were identified using experimental results and spectral estimation techniques. The power spectral density of the system input and the cross power spectral density of the table input and output were estimated using the Bartlett's spectral estimation method. The experimentally-estimated table acceleration transfer functions obtained for different working conditions are correlated with their analytical counterparts. As a result of this comprehensive correlation study, a thorough understanding of the shaking table dynamics and its sensitivities to control and payload parameters is obtained. Moreover, the correlation study leads to a calibrated analytical model of the shaking table of high predictive ability. It is concluded that, in its present conditions, the Rice shaking table is able to reproduce, with a high degree of accuracy, model earthquake accelerations time histories in the frequency bandwidth from 0 to 75 Hz. Furthermore, the exhaustive analysis performed indicates that the table transfer function is not significantly affected by the presence of a large (in terms of weight) payload with a fundamental frequency up to 20 Hz. Payloads having a higher fundamental frequency do affect significantly the shaking table performance and require a modification of the table control gain setting that can be easily obtained using the predictive analytical model of the shaking table. The complete description of a structural dynamic experiment performed using the Rice shaking table facility is also reported herein. The object of this experimentation was twofold: (1) to verify the testing capability of the shaking table and, (2) to experimentally validate a simplified theory developed by the author, which predicts the maximum rotational response developed by seismic isolated building structures characterized by non-coincident centers of mass and rigidity, when subjected to strong earthquake ground motions.

  10. Identification of metastable states in peptide's dynamics

    NASA Astrophysics Data System (ADS)

    Ruzhytska, Svitlana; Jacobi, Martin Nilsson; Jensen, Christian H.; Nerukh, Dmitry

    2010-10-01

    A recently developed spectral method for identifying metastable states in Markov chains is used to analyze the conformational dynamics of a four-residue peptide valine-proline-alanine-leucine. We compare our results to empirically defined conformational states and show that the found metastable states correctly reproduce the conformational dynamics of the system.

  11. Dynamic Information Networks: Geometry, Topology and Statistical Learning for the Articulation of Structure

    DTIC Science & Technology

    2015-06-23

    T. Bates, S. Brocklebank, S. Pauls, and D.Rockmore, A spectral clustering approach to the structure of personality: contrasting the FFM and...A spectral clustering approach to the structure of personality: contrasting the FFM and HEXACO models, Journal of Research in Personality, Volume 57

  12. Exaggerated heart rate oscillations during two meditation techniques.

    PubMed

    Peng, C K; Mietus, J E; Liu, Y; Khalsa, G; Douglas, P S; Benson, H; Goldberger, A L

    1999-07-31

    We report extremely prominent heart rate oscillations associated with slow breathing during specific traditional forms of Chinese Chi and Kundalini Yoga meditation techniques in healthy young adults. We applied both spectral analysis and a novel analytic technique based on the Hilbert transform to quantify these heart rate dynamics. The amplitude of these oscillations during meditation was significantly greater than in the pre-meditation control state and also in three non-meditation control groups: i) elite athletes during sleep, ii) healthy young adults during metronomic breathing, and iii) healthy young adults during spontaneous nocturnal breathing. This finding, along with the marked variability of the beat-to-beat heart rate dynamics during such profound meditative states, challenges the notion of meditation as only an autonomically quiescent state.

  13. Analysis of Aerospike Plume Induced Base-Heating Environment

    NASA Technical Reports Server (NTRS)

    Wang, Ten-See

    1998-01-01

    Computational analysis is conducted to study the effect of an aerospike engine plume on X-33 base-heating environment during ascent flight. To properly account for the effect of forebody and aftbody flowfield such as shocks and to allow for potential plume-induced flow-separation, thermo-flowfield of trajectory points is computed. The computational methodology is based on a three-dimensional finite-difference, viscous flow, chemically reacting, pressure-base computational fluid dynamics formulation, and a three-dimensional, finite-volume, spectral-line based weighted-sum-of-gray-gases radiation absorption model computational heat transfer formulation. The predicted convective and radiative base-heat fluxes are presented.

  14. Inverting dynamic force microscopy: From signals to time-resolved interaction forces

    PubMed Central

    Stark, Martin; Stark, Robert W.; Heckl, Wolfgang M.; Guckenberger, Reinhard

    2002-01-01

    Transient forces between nanoscale objects on surfaces govern friction, viscous flow, and plastic deformation, occur during manipulation of matter, or mediate the local wetting behavior of thin films. To resolve transient forces on the (sub) microsecond time and nanometer length scale, dynamic atomic force microscopy (AFM) offers largely unexploited potential. Full spectral analysis of the AFM signal completes dynamic AFM. Inverting the signal formation process, we measure the time course of the force effective at the sensing tip. This approach yields rich insight into processes at the tip and dispenses with a priori assumptions about the interaction, as it relies solely on measured data. Force measurements on silicon under ambient conditions demonstrate the distinct signature of the interaction and reveal that peak forces exceeding 200 nN are applied to the sample in a typical imaging situation. These forces are 2 orders of magnitude higher than those in covalent bonds. PMID:12070341

  15. Time-Frequency Analysis of Rocket Nozzle Wall Pressures During Start-up Transients

    NASA Technical Reports Server (NTRS)

    Baars, Woutijn J.; Tinney, Charles E.; Ruf, Joseph H.

    2011-01-01

    Surveys of the fluctuating wall pressure were conducted on a sub-scale, thrust- optimized parabolic nozzle in order to develop a physical intuition for its Fourier-azimuthal mode behavior during fixed and transient start-up conditions. These unsteady signatures are driven by shock wave turbulent boundary layer interactions which depend on the nozzle pressure ratio and nozzle geometry. The focus however, is on the degree of similarity between the spectral footprints of these modes obtained from transient start-ups as opposed to a sequence of fixed nozzle pressure ratio conditions. For the latter, statistically converged spectra are computed using conventional Fourier analyses techniques, whereas the former are investigated by way of time-frequency analysis. The findings suggest that at low nozzle pressure ratios -- where the flow resides in a Free Shock Separation state -- strong spectral similarities occur between fixed and transient conditions. Conversely, at higher nozzle pressure ratios -- where the flow resides in Restricted Shock Separation -- stark differences are observed between the fixed and transient conditions and depends greatly on the ramping rate of the transient period. And so, it appears that an understanding of the dynamics during transient start-up conditions cannot be furnished by a way of fixed flow analysis.

  16. Broadband optical equalizer using fault tolerant digital micromirrors.

    PubMed

    Riza, Nabeel; Mughal, M Junaid

    2003-06-30

    For the first time, the design and demonstration of a near continuous spectral processing mode broadband equalizer is described using the earlier proposed macro-pixel spatial approach for multiwavelength fiber-optic attenuation in combination with a high spectral resolution broadband transmissive volume Bragg grating. The demonstrated design features low loss and low polarization dependent loss with broadband operation. Such an analog mode spectral processor can impact optical applications ranging from test and instrumentation to dynamic alloptical networks.

  17. An Extension of the Time-Spectral Method to Overset Solvers

    NASA Technical Reports Server (NTRS)

    Leffell, Joshua Isaac; Murman, Scott M.; Pulliam, Thomas

    2013-01-01

    Relative motion in the Cartesian or overset framework causes certain spatial nodes to move in and out of the physical domain as they are dynamically blanked by moving solid bodies. This poses a problem for the conventional Time-Spectral approach, which expands the solution at every spatial node into a Fourier series spanning the period of motion. The proposed extension to the Time-Spectral method treats unblanked nodes in the conventional manner but expands the solution at dynamically blanked nodes in a basis of barycentric rational polynomials spanning partitions of contiguously defined temporal intervals. Rational polynomials avoid Runge's phenomenon on the equidistant time samples of these sub-periodic intervals. Fourier- and rational polynomial-based differentiation operators are used in tandem to provide a consistent hybrid Time-Spectral overset scheme capable of handling relative motion. The hybrid scheme is tested with a linear model problem and implemented within NASA's OVERFLOW Reynolds-averaged Navier- Stokes (RANS) solver. The hybrid Time-Spectral solver is then applied to inviscid and turbulent RANS cases of plunging and pitching airfoils and compared to time-accurate and experimental data. A limiter was applied in the turbulent case to avoid undershoots in the undamped turbulent eddy viscosity while maintaining accuracy. The hybrid scheme matches the performance of the conventional Time-Spectral method and converges to the time-accurate results with increased temporal resolution.

  18. Spectral functions of a time-periodically driven Falicov-Kimball model: Real-space Floquet dynamical mean-field theory study

    NASA Astrophysics Data System (ADS)

    Qin, Tao; Hofstetter, Walter

    2017-08-01

    We present a systematic study of the spectral functions of a time-periodically driven Falicov-Kimball Hamiltonian. In the high-frequency limit, this system can be effectively described as a Harper-Hofstadter-Falicov-Kimball model. Using real-space Floquet dynamical mean-field theory (DMFT), we take into account the interaction effects and contributions from higher Floquet bands in a nonperturbative way. Our calculations show a high degree of similarity between the interacting driven system and its effective static counterpart with respect to spectral properties. However, as also illustrated by our results, one should bear in mind that Floquet DMFT describes a nonequilibrium steady state, while an effective static Hamiltonian describes an equilibrium state. We further demonstrate the possibility of using real-space Floquet DMFT to study edge states on a cylinder geometry.

  19. Assessing FRET using Spectral Techniques

    PubMed Central

    Leavesley, Silas J.; Britain, Andrea L.; Cichon, Lauren K.; Nikolaev, Viacheslav O.; Rich, Thomas C.

    2015-01-01

    Förster resonance energy transfer (FRET) techniques have proven invaluable for probing the complex nature of protein–protein interactions, protein folding, and intracellular signaling events. These techniques have traditionally been implemented with the use of one or more fluorescence band-pass filters, either as fluorescence microscopy filter cubes, or as dichroic mirrors and band-pass filters in flow cytometry. In addition, new approaches for measuring FRET, such as fluorescence lifetime and acceptor photobleaching, have been developed. Hyperspectral techniques for imaging and flow cytometry have also shown to be promising for performing FRET measurements. In this study, we have compared traditional (filter-based) FRET approaches to three spectral-based approaches: the ratio of acceptor-to-donor peak emission, linear spectral unmixing, and linear spectral unmixing with a correction for direct acceptor excitation. All methods are estimates of FRET efficiency, except for one-filter set and three-filter set FRET indices, which are included for consistency with prior literature. In the first part of this study, spectrofluorimetric data were collected from a CFP–Epac–YFP FRET probe that has been used for intracellular cAMP measurements. All comparisons were performed using the same spectrofluorimetric datasets as input data, to provide a relevant comparison. Linear spectral unmixing resulted in measurements with the lowest coefficient of variation (0.10) as well as accurate fits using the Hill equation. FRET efficiency methods produced coefficients of variation of less than 0.20, while FRET indices produced coefficients of variation greater than 8.00. These results demonstrate that spectral FRET measurements provide improved response over standard, filter-based measurements. Using spectral approaches, single-cell measurements were conducted through hyperspectral confocal microscopy, linear unmixing, and cell segmentation with quantitative image analysis. Results from these studies confirmed that spectral imaging is effective for measuring subcellular, time-dependent FRET dynamics and that additional fluorescent signals can be readily separated from FRET signals, enabling multilabel studies of molecular interactions. PMID:23929684

  20. Assessing FRET using spectral techniques.

    PubMed

    Leavesley, Silas J; Britain, Andrea L; Cichon, Lauren K; Nikolaev, Viacheslav O; Rich, Thomas C

    2013-10-01

    Förster resonance energy transfer (FRET) techniques have proven invaluable for probing the complex nature of protein-protein interactions, protein folding, and intracellular signaling events. These techniques have traditionally been implemented with the use of one or more fluorescence band-pass filters, either as fluorescence microscopy filter cubes, or as dichroic mirrors and band-pass filters in flow cytometry. In addition, new approaches for measuring FRET, such as fluorescence lifetime and acceptor photobleaching, have been developed. Hyperspectral techniques for imaging and flow cytometry have also shown to be promising for performing FRET measurements. In this study, we have compared traditional (filter-based) FRET approaches to three spectral-based approaches: the ratio of acceptor-to-donor peak emission, linear spectral unmixing, and linear spectral unmixing with a correction for direct acceptor excitation. All methods are estimates of FRET efficiency, except for one-filter set and three-filter set FRET indices, which are included for consistency with prior literature. In the first part of this study, spectrofluorimetric data were collected from a CFP-Epac-YFP FRET probe that has been used for intracellular cAMP measurements. All comparisons were performed using the same spectrofluorimetric datasets as input data, to provide a relevant comparison. Linear spectral unmixing resulted in measurements with the lowest coefficient of variation (0.10) as well as accurate fits using the Hill equation. FRET efficiency methods produced coefficients of variation of less than 0.20, while FRET indices produced coefficients of variation greater than 8.00. These results demonstrate that spectral FRET measurements provide improved response over standard, filter-based measurements. Using spectral approaches, single-cell measurements were conducted through hyperspectral confocal microscopy, linear unmixing, and cell segmentation with quantitative image analysis. Results from these studies confirmed that spectral imaging is effective for measuring subcellular, time-dependent FRET dynamics and that additional fluorescent signals can be readily separated from FRET signals, enabling multilabel studies of molecular interactions. © 2013 International Society for Advancement of Cytometry. Copyright © 2013 International Society for Advancement of Cytometry.

  1. Dynamics of homogeneous shear turbulence: A key role of the nonlinear transverse cascade in the bypass concept.

    PubMed

    Mamatsashvili, G; Khujadze, G; Chagelishvili, G; Dong, S; Jiménez, J; Foysi, H

    2016-08-01

    To understand the mechanism of the self-sustenance of subcritical turbulence in spectrally stable (constant) shear flows, we performed direct numerical simulations of homogeneous shear turbulence for different aspect ratios of the flow domain with subsequent analysis of the dynamical processes in spectral or Fourier space. There are no exponentially growing modes in such flows and the turbulence is energetically supported only by the linear growth of Fourier harmonics of perturbations due to the shear flow non-normality. This non-normality-induced growth, also known as nonmodal growth, is anisotropic in spectral space, which, in turn, leads to anisotropy of nonlinear processes in this space. As a result, a transverse (angular) redistribution of harmonics in Fourier space is the main nonlinear process in these flows, rather than direct or inverse cascades. We refer to this type of nonlinear redistribution as the nonlinear transverse cascade. It is demonstrated that the turbulence is sustained by a subtle interplay between the linear nonmodal growth and the nonlinear transverse cascade. This course of events reliably exemplifies a well-known bypass scenario of subcritical turbulence in spectrally stable shear flows. These two basic processes mainly operate at large length scales, comparable to the domain size. Therefore, this central, small wave number area of Fourier space is crucial in the self-sustenance; we defined its size and labeled it as the vital area of turbulence. Outside the vital area, the nonmodal growth and the transverse cascade are of secondary importance: Fourier harmonics are transferred to dissipative scales by the nonlinear direct cascade. Although the cascades and the self-sustaining process of turbulence are qualitatively the same at different aspect ratios, the number of harmonics actively participating in this process (i.e., the harmonics whose energies grow more than 10% of the maximum spectral energy at least once during evolution) varies, but always remains quite large (equal to 36, 86, and 209) in the considered here three aspect ratios. This implies that the self-sustenance of subcritical turbulence cannot be described by low-order models.

  2. Dynamics of homogeneous shear turbulence: A key role of the nonlinear transverse cascade in the bypass concept

    NASA Astrophysics Data System (ADS)

    Mamatsashvili, G.; Khujadze, G.; Chagelishvili, G.; Dong, S.; Jiménez, J.; Foysi, H.

    2016-08-01

    To understand the mechanism of the self-sustenance of subcritical turbulence in spectrally stable (constant) shear flows, we performed direct numerical simulations of homogeneous shear turbulence for different aspect ratios of the flow domain with subsequent analysis of the dynamical processes in spectral or Fourier space. There are no exponentially growing modes in such flows and the turbulence is energetically supported only by the linear growth of Fourier harmonics of perturbations due to the shear flow non-normality. This non-normality-induced growth, also known as nonmodal growth, is anisotropic in spectral space, which, in turn, leads to anisotropy of nonlinear processes in this space. As a result, a transverse (angular) redistribution of harmonics in Fourier space is the main nonlinear process in these flows, rather than direct or inverse cascades. We refer to this type of nonlinear redistribution as the nonlinear transverse cascade. It is demonstrated that the turbulence is sustained by a subtle interplay between the linear nonmodal growth and the nonlinear transverse cascade. This course of events reliably exemplifies a well-known bypass scenario of subcritical turbulence in spectrally stable shear flows. These two basic processes mainly operate at large length scales, comparable to the domain size. Therefore, this central, small wave number area of Fourier space is crucial in the self-sustenance; we defined its size and labeled it as the vital area of turbulence. Outside the vital area, the nonmodal growth and the transverse cascade are of secondary importance: Fourier harmonics are transferred to dissipative scales by the nonlinear direct cascade. Although the cascades and the self-sustaining process of turbulence are qualitatively the same at different aspect ratios, the number of harmonics actively participating in this process (i.e., the harmonics whose energies grow more than 10% of the maximum spectral energy at least once during evolution) varies, but always remains quite large (equal to 36, 86, and 209) in the considered here three aspect ratios. This implies that the self-sustenance of subcritical turbulence cannot be described by low-order models.

  3. Accuracy Enhancement of Inertial Sensors Utilizing High Resolution Spectral Analysis

    PubMed Central

    Noureldin, Aboelmagd; Armstrong, Justin; El-Shafie, Ahmed; Karamat, Tashfeen; McGaughey, Don; Korenberg, Michael; Hussain, Aini

    2012-01-01

    In both military and civilian applications, the inertial navigation system (INS) and the global positioning system (GPS) are two complementary technologies that can be integrated to provide reliable positioning and navigation information for land vehicles. The accuracy enhancement of INS sensors and the integration of INS with GPS are the subjects of widespread research. Wavelet de-noising of INS sensors has had limited success in removing the long-term (low-frequency) inertial sensor errors. The primary objective of this research is to develop a novel inertial sensor accuracy enhancement technique that can remove both short-term and long-term error components from inertial sensor measurements prior to INS mechanization and INS/GPS integration. A high resolution spectral analysis technique called the fast orthogonal search (FOS) algorithm is used to accurately model the low frequency range of the spectrum, which includes the vehicle motion dynamics and inertial sensor errors. FOS models the spectral components with the most energy first and uses an adaptive threshold to stop adding frequency terms when fitting a term does not reduce the mean squared error more than fitting white noise. The proposed method was developed, tested and validated through road test experiments involving both low-end tactical grade and low cost MEMS-based inertial systems. The results demonstrate that in most cases the position accuracy during GPS outages using FOS de-noised data is superior to the position accuracy using wavelet de-noising.

  4. Pre-Juno Optical Analysis of Jupiter's Atmosphere with the NMSU Acousto-optic Imaging Camera

    NASA Astrophysics Data System (ADS)

    Dahl, Emma; Chanover, Nancy J.; Voelz, David; Kuehn, David M.; Strycker, Paul D.

    2016-10-01

    Jupiter's upper atmosphere is a highly dynamic system in which clouds and storms change color, shape, and size on variable timescales. The exact mechanism by which the deep atmosphere affects these changes in the uppermost cloud deck is still unknown. With Juno's arrival at Jupiter in July 2016, the thermal radiation from the deep atmosphere will be measurable with the spacecraft's Microwave Radiometer. By taking detailed optical measurements of Jupiter's uppermost cloud deck in conjunction with Juno's microwave observations, we can provide a context in which to better understand these observations. This data will also provide a complement to the near-IR sensitivity of the Jovian InfraRed Auroral Mapper and will expand on the limited spectral coverage of JunoCam. Ultimately, we can utilize the two complementary datasets in order to thoroughly characterize Jupiter's atmosphere in terms of its vertical cloud structure, color distribution, and dynamical state throughout the Juno era. In order to obtain high spectral resolution images of Jupiter's atmosphere in the optical regime, we use the New Mexico State University Acousto-optic Imaging Camera (NAIC). NAIC contains an acousto-optic tunable filter, which allows us to take hyperspectral image cubes of Jupiter from 450-950 nm at an average spectral resolution (λ/dλ) of 242. We present an analysis of our pre-Juno dataset obtained with NAIC at the Apache Point Observatory 3.5-m telescope during the night of March 28, 2016. Under primarily photometric conditions, we obtained 6 hyperspectral image cubes of Jupiter over the course of the night, totaling approximately 2,960 images. From these data we derive low-resolution optical spectra of the Great Red Spot and a representative belt and zone to compare with previous work and laboratory measurements of candidate chromophore materials. Future work will focus on radiative transfer modeling to elucidate the Jovian cloud structure during the Juno era. This work was supported by NASA through award number NNX15AP34A.

  5. Early Juno Era Optical Imaging and Analysis of Jupiter's Atmospheric Structure and Color with the NMSU Acousto-optic Imaging Camera

    NASA Astrophysics Data System (ADS)

    Dahl, E.; Chanover, N.; Voelz, D.; Kuehn, D.; Strycker, P.

    2016-12-01

    Jupiter's upper atmosphere is a highly dynamic system in which clouds and storms change color, shape, and size on variable timescales. The exact mechanism by which the deep atmosphere affects these changes in the uppermost cloud deck is still unknown. However, with Juno's arrival in July 2016, it is now possible to take detailed observations of the deep atmosphere with the spacecraft's Microwave Radiometer. By taking detailed optical measurements of Jupiter's uppermost cloud deck in conjunction with these microwave observations, we can provide a context in which to better understand these observations. Ultimately, we can utilize these two complementary datasets in order to thoroughly characterize Jupiter's atmosphere in terms of its vertical cloud structure, color distribution, and dynamical state throughout the Juno era. These optical data will also provide a complement to the near-IR sensitivity of the Jovian InfraRed Auroral Mapper and will expand on the limited spectral coverage of JunoCam. In order to obtain high spectral resolution images of Jupiter's atmosphere in the optical regime we use the New Mexico State University Acousto-optic Imaging Camera (NAIC). NAIC's acousto-optic tunable filter allows us to take hyperspectral image cubes of Jupiter from 450-950 nm at an average spectral resolution (λ/dλ) of 242. We present a preliminary analysis of two datasets obtained with NAIC at the Apache Point Observatory 3.5-m telescope: one pre-Juno dataset from March 2016 and the other from November 2016. From these data we derive low-resolution optical spectra of the Great Red Spot and a representative belt and zone to compare with previous work and laboratory measurements of candidate chromophore materials. Additionally, we compare these two datasets to inspect how the atmosphere has changed since before Juno arrived at Jupiter. NASA supported this work through award number NNX15AP34A.

  6. ANALYSIS OF THE HERSCHEL /HEXOS SPECTRAL SURVEY TOWARD ORION SOUTH: A MASSIVE PROTOSTELLAR ENVELOPE WITH STRONG EXTERNAL IRRADIATION

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tahani, K.; Plume, R.; Bergin, E. A.

    2016-11-20

    We present results from a comprehensive submillimeter spectral survey toward the source Orion South, based on data obtained with the Heterodyne Instrument for the Far-Infrared instrument on board the Herschel Space Observatory , covering the frequency range of 480 to 1900 GHz. We detect 685 spectral lines with signal-to-noise ratios (S/Ns) > 3 σ , originating from 52 different molecular and atomic species. We model each of the detected species assuming conditions of Local Thermodynamic Equilibrium. This analysis provides an estimate of the physical conditions of Orion South (column density, temperature, source size, and V {sub LSR}). We find evidencemore » for three different cloud components: a cool ( T {sub ex} ∼ 20–40 K), spatially extended (>60″), and quiescent (Δ V {sub FWHM} ∼ 4 km s{sup -1}) component; a warmer ( T {sub ex} ∼ 80–100 K), less spatially extended (∼30″), and dynamic (Δ V {sub FWHM} ∼ 8 km s{sup -1}) component, which is likely affected by embedded outflows; and a kinematically distinct region ( T {sub ex} > 100 K; V {sub LSR} ∼ 8 km s{sup -1}), dominated by emission from species that trace ultraviolet irradiation, likely at the surface of the cloud. We find little evidence for the existence of a chemically distinct “hot-core” component, likely due to the small filling factor of the hot core or hot cores within the Herschel beam. We find that the chemical composition of the gas in the cooler, quiescent component of Orion South more closely resembles that of the quiescent ridge in Orion-KL. The gas in the warmer, dynamic component, however, more closely resembles that of the Compact Ridge and Plateau regions of Orion-KL, suggesting that higher temperatures and shocks also have an influence on the overall chemistry of Orion South.« less

  7. Apparatus and system for multivariate spectral analysis

    DOEpatents

    Keenan, Michael R.; Kotula, Paul G.

    2003-06-24

    An apparatus and system for determining the properties of a sample from measured spectral data collected from the sample by performing a method of multivariate spectral analysis. The method can include: generating a two-dimensional matrix A containing measured spectral data; providing a weighted spectral data matrix D by performing a weighting operation on matrix A; factoring D into the product of two matrices, C and S.sup.T, by performing a constrained alternating least-squares analysis of D=CS.sup.T, where C is a concentration intensity matrix and S is a spectral shapes matrix; unweighting C and S by applying the inverse of the weighting used previously; and determining the properties of the sample by inspecting C and S. This method can be used by a spectrum analyzer to process X-ray spectral data generated by a spectral analysis system that can include a Scanning Electron Microscope (SEM) with an Energy Dispersive Detector and Pulse Height Analyzer.

  8. Mathematical modeling of transmission co-infection tuberculosis in HIV community

    NASA Astrophysics Data System (ADS)

    Lusiana, V.; Putra, P. S.; Nuraini, N.; Soewono, E.

    2017-03-01

    TB and HIV infection have the effect of deeply on assault the immune system, since they can afford to weaken host immune respone through a mechanism that has not been fully understood. HIV co-infection is the stongest risk factor for progression of M. tuberculosis to active TB disease in HIV individuals, as well as TB has been accelerated to progression HIV infection. In this paper we create a model of transmission co-infection TB in HIV community, dynamic system with ten compartments built in here. Dynamic analysis in this paper mentioned ranging from disease free equilibrium conditions, endemic equilibrium conditions, basic reproduction ratio, stability analysis and numerical simulation. Basic reproductive ratio were obtained from spectral radius the next generation matrix of the model. Numerical simulations are built to justify the results of the analysis and to see the changes in the dynamics of the population in each compartment. The sensitivity analysis indicates that the parameters affecting the population dynamics of TB in people with HIV infection is parameters rate of progression of individuals from the exposed TB class to the active TB, treatment rate of exposed TB individuals, treatment rate of infectious (active TB) individuals and probability of transmission of TB infection from an infective to a susceptible per contact per unit time. We can conclude that growing number of infections carried by infectious TB in people with HIV infection can lead to increased spread of disease or increase in endemic conditions.

  9. Hybrid least squares multivariate spectral analysis methods

    DOEpatents

    Haaland, David M.

    2004-03-23

    A set of hybrid least squares multivariate spectral analysis methods in which spectral shapes of components or effects not present in the original calibration step are added in a following prediction or calibration step to improve the accuracy of the estimation of the amount of the original components in the sampled mixture. The hybrid method herein means a combination of an initial calibration step with subsequent analysis by an inverse multivariate analysis method. A spectral shape herein means normally the spectral shape of a non-calibrated chemical component in the sample mixture but can also mean the spectral shapes of other sources of spectral variation, including temperature drift, shifts between spectrometers, spectrometer drift, etc. The shape can be continuous, discontinuous, or even discrete points illustrative of the particular effect.

  10. Analysis of spectrally resolved autofluorescence images by support vector machines

    NASA Astrophysics Data System (ADS)

    Mateasik, A.; Chorvat, D.; Chorvatova, A.

    2013-02-01

    Spectral analysis of the autofluorescence images of isolated cardiac cells was performed to evaluate and to classify the metabolic state of the cells in respect to the responses to metabolic modulators. The classification was done using machine learning approach based on support vector machine with the set of the automatically calculated features from recorded spectral profile of spectral autofluorescence images. This classification method was compared with the classical approach where the individual spectral components contributing to cell autofluorescence were estimated by spectral analysis, namely by blind source separation using non-negative matrix factorization. Comparison of both methods showed that machine learning can effectively classify the spectrally resolved autofluorescence images without the need of detailed knowledge about the sources of autofluorescence and their spectral properties.

  11. Complexity and time asymmetry of heart rate variability are altered in acute mental stress.

    PubMed

    Visnovcova, Z; Mestanik, M; Javorka, M; Mokra, D; Gala, M; Jurko, A; Calkovska, A; Tonhajzerova, I

    2014-07-01

    We aimed to study the complexity and time asymmetry of short-term heart rate variability (HRV) as an index of complex neurocardiac control in response to stress using symbolic dynamics and time irreversibility methods. ECG was recorded at rest and during and after two stressors (Stroop, arithmetic test) in 70 healthy students. Symbolic dynamics parameters (NUPI, NCI, 0V%, 1V%, 2LV%, 2UV%), and time irreversibility indices (P%, G%, E) were evaluated. Additionally, HRV magnitude was quantified by linear parameters: spectral powers in low (LF) and high frequency (HF) bands. Our results showed a reduction of HRV complexity in stress (lower NUPI with both stressors, lower NCI with Stroop). Pattern classification analysis revealed significantly higher 0V% and lower 2LV% with both stressors, indicating a shift in sympathovagal balance, and significantly higher 1V% and lower 2UV% with Stroop. An unexpected result was found in time irreversibility: significantly lower G% and E with both stressors, P% index significantly declined only with arithmetic test. Linear HRV analysis confirmed vagal withdrawal (lower HF) with both stressors; LF significantly increased with Stroop and decreased with arithmetic test. Correlation analysis revealed no significant associations between symbolic dynamics and time irreversibility. Concluding, symbolic dynamics and time irreversibility could provide independent information related to alterations of neurocardiac control integrity in stress-related disease.

  12. Macroturbulence in Very High Resolution Atmospheric Models: Evidence for Two Scaling Regimes

    NASA Astrophysics Data System (ADS)

    Straus, D. M.

    2010-12-01

    The macro-turbulent properties of the atmosphere's circulation are examined in a number of very high resolution seasonal simulations using the global Nonhydrostatic ICosahedral Atmospheric Model (NICAM) at 7-km horizontal resolution (40 levels), and the forecast model of the European Centre for Medium-Range Weather Forecasts (ECMWF) at T1279 and T2047 spectral resolutions (90-levels). These simulations were carried out as part of an extraordinary collaborative project between the Center for Ocean-Land-Atmosphere Studies (COLA), the University of Tokyo, the Japan Agency for Marine-Earth Science and Technology (JAMSTEC), ECMWF, and the National Institute of Computational Sciences (NICS) The goals of the analysis are to document the rotational and divergence kinetic energy spectral characteristics, to shed light on the different scaling regimes obtained and the role of non-hydrostatic dynamics, and to asses the effects of the smallest scales on the cascades of energy. Simulations with all the models show some evidence of two scaling regimes (power law with steep slope, and a distinctly more shallow slope at smaller scales) for both rotational and divergent kinetic energy. The strength of the evidence for the two-regimes, as well as the wavenumber ranges in which they occur, do differ between models. Analysis of different time scale contributions to the spectra lend insight into the energy transfer mechanism. The implications for dynamical theories of turbulent energy exchange are discussed, as well as difference in approach to compared with multiplicative cascade theories.

  13. The fabrication of flip-covered plasmonic nanostructure surfaces with enhanced wear resistance

    NASA Astrophysics Data System (ADS)

    Jung, Joo-Yun; Sung, Sang-Keun; Kim, Kwang-Seop; Cheon, So-Hui; Lee, Jihye; Choi, Jun-Hyuk; Lee, Eungsug

    2017-01-01

    Exposed nanostructure surfaces often suffer from external dynamic wear, particularly when used in human interaction, resulting in surface defects and the degradation of plasmonic resonance properties particularly in terms of transmittance extinction rate and peak-to-valley slope. In this work, a method for the fabrication of flip-covered silver nanostructure-arrayed surfaces is shown to enhance wear resistance. Selectively transferred silver dot and silver webbed-trench exposed reference samples were fabricated by metal nanoimprint, and flip-covered samples were created by flipping and bonding reference samples onto a PET film coated with an adhesive layer. The samples' spectral transmittance was measured before and after a dynamic wear test. Some spectral shift was observed due to the change in refractive index of the surrounding media, but this was not as significant as the effects of the other chosen geometry factors. It was found that dynamic wear had a greater effect on the plasmonic resonance behavior of the exposed samples than in those that had been flip-covered. This suggests that flip-covering may be an effective strategy for the protection of plasmonic resonators against dynamic wear. It is expected that the slight variations in spectral transmittance could be compensated through proper tuning of the sample geometry.

  14. Time-dependent density functional theory for open systems with a positivity-preserving decomposition scheme for environment spectral functions

    NASA Astrophysics Data System (ADS)

    Wang, RuLin; Zheng, Xiao; Kwok, YanHo; Xie, Hang; Chen, GuanHua; Yam, ChiYung

    2015-04-01

    Understanding electronic dynamics on material surfaces is fundamentally important for applications including nanoelectronics, inhomogeneous catalysis, and photovoltaics. Practical approaches based on time-dependent density functional theory for open systems have been developed to characterize the dissipative dynamics of electrons in bulk materials. The accuracy and reliability of such approaches depend critically on how the electronic structure and memory effects of surrounding material environment are accounted for. In this work, we develop a novel squared-Lorentzian decomposition scheme, which preserves the positive semi-definiteness of the environment spectral matrix. The resulting electronic dynamics is guaranteed to be both accurate and convergent even in the long-time limit. The long-time stability of electronic dynamics simulation is thus greatly improved within the current decomposition scheme. The validity and usefulness of our new approach are exemplified via two prototypical model systems: quasi-one-dimensional atomic chains and two-dimensional bilayer graphene.

  15. Field dynamics inference via spectral density estimation

    NASA Astrophysics Data System (ADS)

    Frank, Philipp; Steininger, Theo; Enßlin, Torsten A.

    2017-11-01

    Stochastic differential equations are of utmost importance in various scientific and industrial areas. They are the natural description of dynamical processes whose precise equations of motion are either not known or too expensive to solve, e.g., when modeling Brownian motion. In some cases, the equations governing the dynamics of a physical system on macroscopic scales occur to be unknown since they typically cannot be deduced from general principles. In this work, we describe how the underlying laws of a stochastic process can be approximated by the spectral density of the corresponding process. Furthermore, we show how the density can be inferred from possibly very noisy and incomplete measurements of the dynamical field. Generally, inverse problems like these can be tackled with the help of Information Field Theory. For now, we restrict to linear and autonomous processes. To demonstrate its applicability, we employ our reconstruction algorithm on a time-series and spatiotemporal processes.

  16. Producing coherent excitations in pumped Mott antiferromagnetic insulators

    NASA Astrophysics Data System (ADS)

    Wang, Yao; Claassen, Martin; Moritz, B.; Devereaux, T. P.

    2017-12-01

    Nonequilibrium dynamics in correlated materials has attracted attention due to the possibility of characterizing, tuning, and creating complex ordered states. To understand the photoinduced microscopic dynamics, especially the linkage under realistic pump conditions between transient states and remnant elementary excitations, we performed nonperturbative simulations of various time-resolved spectroscopies. We used the Mott antiferromagnetic insulator as a model platform. The transient dynamics of multiparticle excitations can be attributed to the interplay between Floquet virtual states and a modification of the density of states, in which interactions induce a spectral weight transfer. Using an autocorrelation of the time-dependent spectral function, we show that resonance of the virtual states with the upper Hubbard band in the Mott insulator provides the route towards manipulating the electronic distribution and modifying charge and spin excitations. Our results link transient dynamics to the nature of many-body excitations and provide an opportunity to design nonequilibrium states of matter via tuned laser pulses.

  17. Field dynamics inference via spectral density estimation.

    PubMed

    Frank, Philipp; Steininger, Theo; Enßlin, Torsten A

    2017-11-01

    Stochastic differential equations are of utmost importance in various scientific and industrial areas. They are the natural description of dynamical processes whose precise equations of motion are either not known or too expensive to solve, e.g., when modeling Brownian motion. In some cases, the equations governing the dynamics of a physical system on macroscopic scales occur to be unknown since they typically cannot be deduced from general principles. In this work, we describe how the underlying laws of a stochastic process can be approximated by the spectral density of the corresponding process. Furthermore, we show how the density can be inferred from possibly very noisy and incomplete measurements of the dynamical field. Generally, inverse problems like these can be tackled with the help of Information Field Theory. For now, we restrict to linear and autonomous processes. To demonstrate its applicability, we employ our reconstruction algorithm on a time-series and spatiotemporal processes.

  18. Tracking brain states under general anesthesia by using global coherence analysis

    PubMed Central

    Cimenser, Aylin; Purdon, Patrick L.; Pierce, Eric T.; Walsh, John L.; Salazar-Gomez, Andres F.; Harrell, Priscilla G.; Tavares-Stoeckel, Casie; Habeeb, Kathleen; Brown, Emery N.

    2011-01-01

    Time and frequency domain analyses of scalp EEG recordings are widely used to track changes in brain states under general anesthesia. Although these analyses have suggested that different spatial patterns are associated with changes in the state of general anesthesia, the extent to which these patterns are spatially coordinated has not been systematically characterized. Global coherence, the ratio of the largest eigenvalue to the sum of the eigenvalues of the cross-spectral matrix at a given frequency and time, has been used to analyze the spatiotemporal dynamics of multivariate time-series. Using 64-lead EEG recorded from human subjects receiving computer-controlled infusions of the anesthetic propofol, we used surface Laplacian referencing combined with spectral and global coherence analyses to track the spatiotemporal dynamics of the brain's anesthetic state. During unconsciousness the spectrograms in the frontal leads showed increasing α (8–12 Hz) and δ power (0–4 Hz) and in the occipital leads δ power greater than α power. The global coherence detected strong coordinated α activity in the occipital leads in the awake state that shifted to the frontal leads during unconsciousness. It revealed a lack of coordinated δ activity during both the awake and unconscious states. Although strong frontal power during general anesthesia-induced unconsciousness—termed anteriorization—is well known, its possible association with strong α range global coherence suggests highly coordinated spatial activity. Our findings suggest that combined spectral and global coherence analyses may offer a new approach to tracking brain states under general anesthesia. PMID:21555565

  19. Spectral Analysis: From Additive Perspective to Multiplicative Perspective

    NASA Astrophysics Data System (ADS)

    Wu, Z.

    2017-12-01

    The early usage of trigonometric functions can be traced back to at least 17th century BC. It was Bhaskara II of the 12th century CE who first proved the mathematical equivalence between the sum of two trigonometric functions of any given angles and the product of two trigonometric functions of related angles, which has been taught these days in middle school classroom. The additive perspective of trigonometric functions led to the development of the Fourier transform that is used to express any functions as the sum of a set of trigonometric functions and opened a new mathematical field called harmonic analysis. Unfortunately, Fourier's sum cannot directly express nonlinear interactions between trigonometric components of different periods, and thereby lacking the capability of quantifying nonlinear interactions in dynamical systems. In this talk, the speaker will introduce the Huang transform and Holo-spectrum which were pioneered by Norden Huang and emphasizes the multiplicative perspective of trigonometric functions in expressing any function. Holo-spectrum is a multi-dimensional spectral expression of a time series that explicitly identifies the interactions among different scales and quantifies nonlinear interactions hidden in a time series. Along with this introduction, the developing concepts of physical, rather than mathematical, analysis of data will be explained. Various enlightening applications of Holo-spectrum analysis in atmospheric and climate studies will also be presented.

  20. Hyperspectral imaging and multivariate analysis in the dried blood spots investigations

    NASA Astrophysics Data System (ADS)

    Majda, Alicja; Wietecha-Posłuszny, Renata; Mendys, Agata; Wójtowicz, Anna; Łydżba-Kopczyńska, Barbara

    2018-04-01

    The aim of this study was to apply a new methodology using the combination of the hyperspectral imaging and the dry blood spot (DBS) collecting. Application of the hyperspectral imaging is fast and non-destructive. DBS method offers the advantage also on the micro-invasive blood collecting and low volume of required sample. During experimental step, the reflected light was recorded by two hyperspectral systems. The collection of 776 spectral bands in the VIS-NIR range (400-1000 nm) and 256 spectral bands in the SWIR range (970-2500 nm) was applied. Pixel has the size of 8 × 8 and 30 × 30 µm for VIS-NIR and SWIR camera, respectively. The obtained data in the form of hyperspectral cubes were treated with chemometric methods, i.e., minimum noise fraction and principal component analysis. It has been shown that the application of these methods on this type of data, by analyzing the scatter plots, allows a rapid analysis of the homogeneity of DBS, and the selection of representative areas for further analysis. It also gives the possibility of tracking the dynamics of changes occurring in biological traces applied on the surface. For the analyzed 28 blood samples, described method allowed to distinguish those blood stains because of time of apply.

  1. Thermal restraint of a bacterial exopolysaccharide of shallow vent origin.

    PubMed

    Caccamo, Maria Teresa; Zammuto, Vincenzo; Gugliandolo, Concetta; Madeleine-Perdrillat, Claire; Spanò, Antonio; Magazù, Salvatore

    2018-07-15

    To dynamically characterize the thermal properties of the fructose-rich exopolysaccharide (EPS1-T14), produced by the marine thermophilic Bacillus licheniformis T14, the Attenuated Total Reflectance Fourier Transform Infra-Red spectroscopy was coupled to variable temperature ranging from ambient to 80°C. The spectra were analyzed by the following innovative mathematical tools: i) non-ideal spectral deviation, ii) OH-stretching band frequency center shift, iii) spectral distance, and iv) wavelet cross-correlation analysis. The thermal restraint analysis revealed that the whole EPS1-T14 system possessed high stability until 80°C, and suggested that fucose was mainly involved in the EPS1-T14 thermal stability, whereas glucose was responsible for its molecular flexibility. Our results provide novel insights into the thermal stability properties of the whole EPS1-T14 and into the role of its main monosaccharidic units. As a new biopolymer, the thermostable EPS1-T14 could be used in traditional biotechnology fields and in new biomedical areas, as nanocarriers, requiring high temperature processes. Copyright © 2018 Elsevier B.V. All rights reserved.

  2. Constraining Plasma Conditions of the IPT via Spectral Analysis of UV & Visible Emissions and Comparing with a Physical Chemistry Model

    NASA Astrophysics Data System (ADS)

    Nerney, E. G.; Bagenal, F.; Yoshioka, K.; Schmidt, C.

    2017-12-01

    Io emits volcanic gases into space at a rate of about a ton per second. The gases become ionized and trapped in Jupiter's strong magnetic field, forming a torus of plasma that emits 2 terawatts of UV emissions. In recent work re-analyzing UV emissions observed by Voyager, Galileo, & Cassini, we found plasma conditions consistent with a physical chemistry model with a neutral source of dissociated sulfur dioxide from Io (Nerney et al., 2017). In further analysis of UV observations from JAXA's Hisaki mission (using our spectral emission model) we constrain the torus composition with ground based observations. The physical chemistry model (adapted from Delamere et al., 2005) is then used to match derived plasma conditions. We correlate the oxygen to sulfur ratio of the neutral source with volcanic eruptions to understand the change in magnetospheric plasma conditions. Our goal is to better understand and constrain both the temporal and spatial variability of the flow of mass and energy from Io's volcanic atmosphere to Jupiter's dynamic magnetosphere.

  3. Intermediate-scale plasma irregularities in the polar ionosphere inferred from GPS radio occultation

    NASA Astrophysics Data System (ADS)

    Shume, E. B.; Komjathy, A.; Langley, R. B.; Verkhoglyadova, O.; Butala, M. D.; Mannucci, A. J.

    2015-02-01

    We report intermediate-scale plasma irregularities in the polar ionosphere inferred from high-resolution radio occultation (RO) measurements using GPS (Global Positioning System) to CASSIOPE (CAScade Smallsat and IOnospheric Polar Explorer) satellite radio links. The high inclination of CASSIOPE and the high rate of signal reception by the GPS Attitude, Positioning, and Profiling RO receiver on CASSIOPE enable a high-resolution investigation of the dynamics of the polar ionosphere with unprecedented detail. Intermediate-scale, scintillation-producing irregularities, which correspond to 1 to 40 km scales, were inferred by applying multiscale spectral analysis on the RO phase measurements. Using our multiscale spectral analysis approach and satellite data (Polar Operational Environmental Satellites and Defense Meteorological Satellite Program), we discovered that the irregularity scales and phase scintillations have distinct features in the auroral oval and polar cap. We found that large length scales and more intense phase scintillations are prevalent in the auroral oval compared to the polar cap implying that the irregularity scales and phase scintillation characteristics are a function of the solar wind and magnetospheric forcings.

  4. Three dimensional chiral plasmon rulers based on silver nanorod trimers.

    PubMed

    Han, Chunrui; Yang, Lechen; Ye, Piao; Parrott, Edward P J; Pickwell-Macpherson, Emma; Tam, Wing Yim

    2018-04-16

    The symmetry dependences of plasmon excitation modes are studied in 3D silver nanorod trimers. The degenerate plasmon modes split into chiral modes by breaking the inversion and mirror symmetry of the nanorod trimer through translation and/or rotation of the middle rod. With a translation operation, successive evolution of the circular dichroism (CD) spectrum can be achieved through gradual breaking of the inversion symmetry. An additional rotation operation produces even dramatic spectral changes due to breaking a quasi-mirror symmetry resulted from the same angular distance of the middle rod to the top and bottom rods. Especially, pairs of new chiral modes can be excited due to the contact of the middle rod with the top-bottom rod pair. The spectral changes in the simulations, which are also demonstrated experimentally, envision the 3D chiral nanorod trimer system as plasmon ruler for spatial configuration retrieval and dynamic bio-process analysis at the single molecule level.

  5. Simultaneous Spectral and Timing Observations of Accreting Neuron Stars

    NASA Technical Reports Server (NTRS)

    Kaaret, P.; West, Donald K. (Technical Monitor)

    2001-01-01

    The goal of this proposal was to perform simultaneous x-ray spectral and millisecond timing observations of accreting neutron stars to further our understanding of their accretion dynamics and in the hope of using these systems as probes of the physics of strong gravitational fields. Observations of the neutron star binaries 4U0614+091, 4U1728-34, 4U1820-30, and Cyg X-2 were carried out with RXTE and BeppoSAX, ASCA, and Chandra (not all simultaneously). In addition, archival data were analyzed for 4U0614+091 and 4U1820-30. This investigation led to publication of three papers in peer-reviewed journals. These are listed below. In addition, the results were presented at several meetings including the two poster presentations listed below. Dr. Santina Piraino visited SAO for 4 months during 2000 to collaborate on analysis of the data from NAG5-8408 and NAG5-9104.

  6. Analysis of the boreal forest-tundra ecotone: A test of AVIRIS capabilities in the Eastern Canadian subarctic

    NASA Technical Reports Server (NTRS)

    Goward, Samuel N.; Petzold, Donald E.

    1989-01-01

    A comparison was conducted between ground reflectance spectra collected in Schefferville, Canada and imaging spectrometer observations acquired by the AVIRIS sensor in a flight of the ER-2 Aircraft over the same region. The high spectral contrasts present in the Canadian Subarctic appeared to provide an effective test of the operational readiness of the AVIRIS sensor. Previous studies show that in this location various land cover materials possess a wide variety of visible/near infrared reflectance properties. Thus, this landscape served as an excellent test for the sensing variabilities of the newly developed AVIRIS sensor. An underlying hypothesis was that the unique visible/near infrared spectral reflectance patterns of Subarctic lichens could be detected from high altitudes by this advanced imaging spectrometer. The relation between lichen occurrence and boreal forest-tundra ecotone dynamics was investigated.

  7. Worm Algorithm simulations of the hole dynamics in the t-J model

    NASA Astrophysics Data System (ADS)

    Prokof'ev, Nikolai; Ruebenacker, Oliver

    2001-03-01

    In the limit of small J << t, relevant for HTSC materials and Mott-Hubbard systems, computer simulations have to be performed for large systems and at low temperatures. Despite convincing evidence against spin-charge separation obtained by various methods for J > 0.4t there is an ongoing argument that at smaller J spin-charge separation is still possible. Worm algorithm Monte Carlo simulations of the hole Green function for 0.1 < J/t < 0.4 were performed on lattices with up to 32x32 sites, and at temperature J/T = 40 (for the largest size). Spectral analysis reveals a single, delta-function sharp quasiparticle peak at the lowest edge of the spectrum and two distinct peaks above it at all studied J. We rule out the possibility of spin-charge separation in this parameter range, and present, apparently, the hole spectral function in the thermodynamic limit.

  8. Cross-phase modulation-induced spectral broadening in silicon waveguides.

    PubMed

    Zhang, Yanbing; Husko, Chad; Lefrancois, Simon; Rey, Isabella H; Krauss, Thomas F; Schröder, Jochen; Eggleton, Benjamin J

    2016-01-11

    We analytically and experimentally investigate cross-phase modulation (XPM) in silicon waveguides. In contrast to the well known result in pure Kerr media, the spectral broadening ratio of XPM to self-phase modulation is not two in the presence of either two-photon absorption (TPA) or free carriers. The physical origin of this change is different for each effect. In the case of TPA, this nonlinear absorption attenuates and slightly modifies the pulse shape due to differential absorption in the pulse peak and wings. When free carriers are present two different mechanisms modify the dynamics. First, free-carrier absorption performs a similar role to TPA, but is additionally asymmetric due to the delayed free-carrier response. Second, free-carrier dispersion induces an asymmetric blue phase shift which competes directly with the symmetric Kerr-induced XPM red shift. We confirm this analysis with pump-probe experiments in a silicon photonic crystal waveguide.

  9. Numerical simulations of thermoacoustic waves in transcritical fluids employing the spectral difference approach

    NASA Astrophysics Data System (ADS)

    Scalo, Carlo; Migliorino, Mario Tindaro; Chapelier, Jean-Baptiste

    2017-11-01

    We investigate the stability properties of thermoacoustically unstable planar waves in transcritical fluids via high-fidelity Navier-Stokes simulations based on a Spectral Difference (SD) discretization coupled with the Peng-Robinson equation of state and Chung's method for the fluid transport properties. A canonical thermoacoustically unstable standing-wave resonator filled with supercritical CO2 kept in pseudoboiling conditions in the stack is considered. Real fluid effects near the critical point are shown to boost thermoacoustic energy production, as also confirmed by companion eigenvalue analysis supporting the closure of the acoustic energy budgets. A kink in the eigenmode shape is observed at the location of pseudo phase change, consistent with the abrupt change in base impedance. The current study demonstrates a transformative approach to thermoacoustic energy generation, exploiting otherwise unwanted fluid dynamics instabilities commonly observed in aeronautical applications employing transcritical fluids.

  10. Mixed Pattern Matching-Based Traffic Abnormal Behavior Recognition

    PubMed Central

    Cui, Zhiming; Zhao, Pengpeng

    2014-01-01

    A motion trajectory is an intuitive representation form in time-space domain for a micromotion behavior of moving target. Trajectory analysis is an important approach to recognize abnormal behaviors of moving targets. Against the complexity of vehicle trajectories, this paper first proposed a trajectory pattern learning method based on dynamic time warping (DTW) and spectral clustering. It introduced the DTW distance to measure the distances between vehicle trajectories and determined the number of clusters automatically by a spectral clustering algorithm based on the distance matrix. Then, it clusters sample data points into different clusters. After the spatial patterns and direction patterns learned from the clusters, a recognition method for detecting vehicle abnormal behaviors based on mixed pattern matching was proposed. The experimental results show that the proposed technical scheme can recognize main types of traffic abnormal behaviors effectively and has good robustness. The real-world application verified its feasibility and the validity. PMID:24605045

  11. Constraining hot Jupiter’s atmospheric structure and dynamics through Doppler shifted emission spectra

    NASA Astrophysics Data System (ADS)

    Zhang, Jisheng; Kempton, Eliza; Rauscher, Emily

    2017-01-01

    In recent years, astronomers have begun successfully observing the atmospheres of extrasolar planets using ground-based telescopes equipped with spectrographs capable of observing at high spectral resolution (R~105). Such studies are capable of diagnosing the atmospheric structure, composition, and dynamics (winds and rotation) of both transiting and non-transiting exoplanets. However, few studies have examined how the 3-D atmospheric dynamics could alter the emitted light of hot Jupiters at such high spectral resolution. Here, we present a model to explore such influence on the hot Jupiters’ thermal emission spectra. Our aim is to investigate the extent to which the effects of 3-D atmospheric dynamics are imprinted on planet-averaged thermal emission spectra. We couple together a 3-D general circulation model of hot Jupiter atmospheric dynamics (Rauscher & Menou, 2012) with a radiative transfer solver to predict the planet’s disk-integrated emission spectrum as a function of its orbital phase. For the first time, we self-consistently include the effects of the line-of-sight atmospheric motions (resulting from winds and rotation) in the calculation to produce Doppler-shifted spectral line profiles that result from the atmospheric dynamics. We focus our study on three benchmark hot Jupiters, HD 189733b, HD 209458b, and WASP-43b which have been the focus of previous detailed observational studies. We find that the high-resolution Doppler shifted thermal emission spectra can be used to diagnose key properties of the dynamical atmosphere - the planet’s longitudinal temperature and wind structure, and its rotation rate.

  12. Characterization of Bifunctional Spin Labels for Investigating the Structural and Dynamic Properties of Membrane Proteins Using EPR Spectroscopy.

    PubMed

    Sahu, Indra D; Craig, Andrew F; Dunagum, Megan M; McCarrick, Robert M; Lorigan, Gary A

    2017-10-05

    Site-directed spin labeling (SDSL) coupled with electron paramagnetic resonance (EPR) spectroscopy is a very powerful technique to study structural and dynamic properties of membrane proteins. The most widely used spin label is methanthiosulfonate (MTSL). However, the flexibility of this spin label introduces greater uncertainties in EPR measurements obtained for determining structures, side-chain dynamics, and backbone motion of membrane protein systems. Recently, a newer bifunctional spin label (BSL), 3,4-bis(methanethiosulfonylmethyl)-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-1-yloxy, has been introduced to overcome the dynamic limitations associated with the MTSL spin label and has been invaluable in determining protein backbone dynamics and inter-residue distances due to its restricted internal motion and fewer size restrictions. While BSL has been successful in providing more accurate information about the structure and dynamics of several proteins, a detailed characterization of the spin label is still lacking. In this study, we characterized BSLs by performing CW-EPR spectral line shape analysis as a function of temperature on spin-labeled sites inside and outside of the membrane for the integral membrane protein KCNE1 in POPC/POPG lipid bilayers and POPC/POPG lipodisq nanoparticles. The experimental data revealed a powder pattern spectral line shape for all of the KCNE1-BSL samples at 296 K, suggesting the motion of BSLs approaches the rigid limit regime for these series of samples. BSLs were further utilized to report for the first time the distance measurement between two BSLs attached on an integral membrane protein KCNE1 in POPC/POPG lipid bilayers at room temperature using dipolar line broadening CW-EPR spectroscopy. The CW dipolar line broadening EPR data revealed a 15 ± 2 Å distance between doubly attached BSLs on KCNE1 (53/57-63/67) which is consistent with molecular dynamics modeling and the solution NMR structure of KCNE1 which yielded a distance of 17 Å. This study demonstrates the utility of investigating the structural and dynamic properties of membrane proteins in physiologically relevant membrane mimetics using BSLs.

  13. A Markovian Entropy Measure for the Analysis of Calcium Activity Time Series

    PubMed Central

    Rahman, Atiqur; Odorizzi, Laura; LeFew, Michael C.; Golino, Caroline A.; Kemper, Peter; Saha, Margaret S.

    2016-01-01

    Methods to analyze the dynamics of calcium activity often rely on visually distinguishable features in time series data such as spikes, waves, or oscillations. However, systems such as the developing nervous system display a complex, irregular type of calcium activity which makes the use of such methods less appropriate. Instead, for such systems there exists a class of methods (including information theoretic, power spectral, and fractal analysis approaches) which use more fundamental properties of the time series to analyze the observed calcium dynamics. We present a new analysis method in this class, the Markovian Entropy measure, which is an easily implementable calcium time series analysis method which represents the observed calcium activity as a realization of a Markov Process and describes its dynamics in terms of the level of predictability underlying the transitions between the states of the process. We applied our and other commonly used calcium analysis methods on a dataset from Xenopus laevis neural progenitors which displays irregular calcium activity and a dataset from murine synaptic neurons which displays activity time series that are well-described by visually-distinguishable features. We find that the Markovian Entropy measure is able to distinguish between biologically distinct populations in both datasets, and that it can separate biologically distinct populations to a greater extent than other methods in the dataset exhibiting irregular calcium activity. These results support the benefit of using the Markovian Entropy measure to analyze calcium dynamics, particularly for studies using time series data which do not exhibit easily distinguishable features. PMID:27977764

  14. Lifespan Differences in Nonlinear Dynamics during Rest and Auditory Oddball Performance

    ERIC Educational Resources Information Center

    Muller, Viktor; Lindenberger, Ulman

    2012-01-01

    Electroencephalographic recordings (EEG) were used to assess age-associated differences in nonlinear brain dynamics during both rest and auditory oddball performance in children aged 9.0-12.8 years, younger adults, and older adults. We computed nonlinear coupling dynamics and dimensional complexity, and also determined spectral alpha power as an…

  15. Quantitative subpixel spectral detection of targets in multispectral images. [terrestrial and planetary surfaces

    NASA Technical Reports Server (NTRS)

    Sabol, Donald E., Jr.; Adams, John B.; Smith, Milton O.

    1992-01-01

    The conditions that affect the spectral detection of target materials at the subpixel scale are examined. Two levels of spectral mixture analysis for determining threshold detection limits of target materials in a spectral mixture are presented, the cases where the target is detected as: (1) a component of a spectral mixture (continuum threshold analysis) and (2) residuals (residual threshold analysis). The results of these two analyses are compared under various measurement conditions. The examples illustrate the general approach that can be used for evaluating the spectral detectability of terrestrial and planetary targets at the subpixel scale.

  16. Spectral domain phase microscopy: a new tool for measuring cellular dynamics and cytoplasmic flow

    NASA Astrophysics Data System (ADS)

    McDowell, Emily J.; Choma, Michael A.; Ellerbee, Audrey K.; Izatt, Joseph A.

    2005-03-01

    Broadband interferometry is an attractive technique for the detection of cellular motions because it provides depth-resolved interferometric phase information via coherence gating. Here a phase sensitive technique called spectral domain phase microscopy (SDPM) is presented. SDPM is a functional extension of spectral domain optical coherence tomography that allows for the detection of cellular motions and dynamics with nanometer-scale sensitivity. This sensitivity is made possible by the inherent phase stability of spectral domain OCT combined with common-path interferometry. The theory that underlies this technique is presented, the sensitivity of the technique is demonstrated by the measurement of the thermal expansion coefficient of borosilicate glass, and the response of an Amoeba proteus to puncture of its cell membrane is measured. We also exploit the phase stability of SDPM to perform Doppler flow imaging of cytoplasmic streaming in A. proteus. We show reversal of cytoplasmic flow in response to stimuli, and we show that the cytoplasmic flow is laminar (i.e. parabolic) in nature. We are currently investigating the use of SDPM in a variety of different cell types.

  17. Excitation mechanisms in 1 mJ picosecond laser induced low pressure He plasma and the resulting spectral quality enhancement

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Idris, Nasrullah; Lahna, Kurnia; Abdulmadjid, Syahrun Nur

    2015-06-14

    We report in this paper the results of an experimental study on the spectral and dynamical characteristics of plasma emission induced by 1 mJ picoseconds (ps) Nd-YAG laser using spatially resolved imaging and time resolved measurement of the emission intensities of copper sample. This study has provided the experimental evidence concerning the dynamical characteristics of the excitation mechanisms in various stages of the plasma formation, which largely consolidate the basic scenarios of excitation processes commonly accepted so far. However, it is also clearly shown that the duration of the shock wave excitation process induced by ps laser pulses is muchmore » shorter than those observed in laser induced breakdown spectroscopy employing nanosecond laser at higher output energy. This allows the detection of atomic emission due exclusively to He assisted excitation in low pressure He plasma by proper gating of the detection time. Furthermore, the triplet excited state associated with He I 587.6 nm is shown to be the one most likely involved in the process responsible for the excellent spectral quality as evidenced by its application to spectrochemical analysis of a number of samples. The use of very low energy laser pulses also leads to minimal destructive effect marked by the resulted craters of merely about 10 μm diameter and only 10 nm deep. It is especially noteworthy that the excellent emission spectrum of deuterium detected from D-doped titanium sample is free of spectral interference from the undesirable ubiquitous water molecules without a precleaning procedure as applied previously and yielding an impressive detection limit of less than 10 μg/g. Finally, the result of this study also shows a promising application to depth profiling of impurity distribution in the sample investigated.« less

  18. A New Method Using Single-Particle Mass Spectrometry Data to Distinguish Mineral Dust and Biological Aerosols

    NASA Astrophysics Data System (ADS)

    Al-Mashat, H.; Kristensen, L.; Sultana, C. M.; Prather, K. A.

    2016-12-01

    The ability to distinguish types of particles present within a cloud is important for determining accurate inputs to climate models. The chemical composition of particles within cloud liquid droplets and ice crystals can have a significant impact on the timing, location, and amount of precipitation that falls. Precipitation efficiency is increased by the presence of ice crystals in clouds, and both mineral dust and biological aerosols have been shown to be effective ice nucleating particles (INPs) in the atmosphere. A current challenge in aerosol science is distinguishing mineral dust and biological material in the analysis of real-time, ambient, single-particle mass spectral data. Single-particle mass spectrometers are capable of measuring the size-resolved chemical composition of individual atmospheric particles. However, there is no consistent analytical method for distinguishing dust and biological aerosols. Sampling and characterization of control samples (i.e. of known identity) of mineral dust and bacteria were performed by the Aerosol Time-of-Flight Mass Spectrometer (ATOFMS) as part of the Fifth Ice Nucleation (FIN01) Workshop at the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) facility in Karlsruhe, Germany. Using data collected by the ATOFMS of control samples, a new metric has been developed to classify single particles as dust or biological independent of spectral cluster analysis. This method, involving the use of a ratio of mass spectral peak areas for organic nitrogen and silicates, is easily reproducible and does not rely on extensive knowledge of particle chemistry or the ionization characteristics of mass spectrometers. This represents a step toward rapidly distinguishing particle types responsible for ice nucleation activity during real-time sampling in clouds. The ability to distinguish types of particles present within a cloud is important for determining accurate inputs to climate models. The chemical composition of particles within cloud liquid droplets and ice crystals can have a significant impact on the timing, location, and amount of precipitation that falls. Precipitation efficiency is increased by the presence of ice crystals in clouds, and both mineral dust and biological aerosols have been shown to be effective ice nucleating particles (INPs) in the atmosphere. A current challenge in aerosol science is distinguishing mineral dust and biological material in the analysis of real-time, ambient, single-particle mass spectral data. Single-particle mass spectrometers are capable of measuring the size-resolved chemical composition of individual atmospheric particles. However, there is no consistent analytical method for distinguishing dust and biological aerosols. Sampling and characterization of control samples (i.e. of known identity) of mineral dust and bacteria were performed by the Aerosol Time-of-Flight Mass Spectrometer (ATOFMS) as part of the Fifth Ice Nucleation (FIN01) Workshop at the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) facility in Karlsruhe, Germany. Using data collected by the ATOFMS of control samples, a new metric has been developed to classify single particles as dust or biological independent of spectral cluster analysis. This method, involving the use of a ratio of mass spectral peak areas for organic nitrogen and silicates, is easily reproducible and does not rely on extensive knowledge of particle chemistry or the ionization characteristics of mass spectrometers. This represents a step toward rapidly distinguishing particle types responsible for ice nucleation activity during real-time sampling in clouds.

  19. Pulse shaping in mode-locked fiber lasers by in-cavity spectral filter.

    PubMed

    Boscolo, Sonia; Finot, Christophe; Karakuzu, Huseyin; Petropoulos, Periklis

    2014-02-01

    We numerically show the possibility of pulse shaping in a passively mode-locked fiber laser by inclusion of a spectral filter into the laser cavity. Depending on the amplitude transfer function of the filter, we are able to achieve various regimes of advanced temporal waveform generation, including ones featuring bright and dark parabolic-, flat-top-, triangular- and saw-tooth-profiled pulses. The results demonstrate the strong potential of an in-cavity spectral pulse shaper for controlling the dynamics of mode-locked fiber lasers.

  20. Morphological and Spectral Characteristics of Hybrid Nanosystems Based on Mono- and Bimetallic Platinum Nanoparticles and Silver

    NASA Astrophysics Data System (ADS)

    Valueva, S. V.; Vylegzhanina, M. E.; Sukhanova, T. E.

    2018-02-01

    Morphological and spectral characteristics of hybrid nanosystems (NSes) based on mono- and bimetallic silver and platinum nanoparticles (NPs) stabilized by a cationic polyelectrolyte (CP), poly- N,N,N,N-trimethylmethacryloyloxyethylammonium methylsulfate, are determined via static/dynamic light scattering, UV spectroscopy, and atomic force microscopy. The formation of dense spherical polymolecular nanostructures is established. The possibility of controlling the morphological and spectral characteristics of the NS is shown by varying the nature and composition of NPs.

  1. In vivo tear film thickness measurement and tear film dynamics visualization using spectral domain OCT and an efficient delay estimator

    NASA Astrophysics Data System (ADS)

    Aranha dos Santos, Valentin; Schmetterer, Leopold; Gröschl, Martin; Garhofer, Gerhard; Werkmeister, René M.

    2016-03-01

    Dry eye syndrome is a highly prevalent disease of the ocular surface characterized by an instability of the tear film. Traditional methods used for the evaluation of tear film stability are invasive or show limited repeatability. Here we propose a new noninvasive approach to measure tear film thickness using an efficient delay estimator and ultrahigh resolution spectral domain OCT. Silicon wafer phantoms with layers of known thickness and group index were used to validate the estimator-based thickness measurement. A theoretical analysis of the fundamental limit of the precision of the estimator is presented and the analytical expression of the Cramér-Rao lower bound (CRLB), which is the minimum variance that may be achieved by any unbiased estimator, is derived. The performance of the estimator against noise was investigated using simulations. We found that the proposed estimator reaches the CRLB associated with the OCT amplitude signal. The technique was applied in vivo in healthy subjects and dry eye patients. Series of tear film thickness maps were generated, allowing for the visualization of tear film dynamics. Our results show that the central tear film thickness precisely measured in vivo with a coefficient of variation of about 0.65% and that repeatable tear film dynamics can be observed. The presented method has the potential of being an alternative to breakup time measurements (BUT) and could be used in clinical setting to study patients with dry eye disease and monitor their treatments.

  2. THE HUBBLE WIDE FIELD CAMERA 3 TEST OF SURFACES IN THE OUTER SOLAR SYSTEM: SPECTRAL VARIATION ON KUIPER BELT OBJECTS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fraser, Wesley C.; Brown, Michael E.; Glass, Florian, E-mail: wesley.fraser@nrc.ca

    2015-05-01

    Here, we present additional photometry of targets observed as part of the Hubble Wide Field Camera 3 (WFC3) Test of Surfaces in the Outer Solar System. Twelve targets were re-observed with the WFC3 in the optical and NIR wavebands designed to complement those used during the first visit. Additionally, all of the observations originally presented by Fraser and Brown were reanalyzed through the same updated photometry pipeline. A re-analysis of the optical and NIR color distribution reveals a bifurcated optical color distribution and only two identifiable spectral classes, each of which occupies a broad range of colors and has correlatedmore » optical and NIR colors, in agreement with our previous findings. We report the detection of significant spectral variations on five targets which cannot be attributed to photometry errors, cosmic rays, point-spread function or sensitivity variations, or other image artifacts capable of explaining the magnitude of the variation. The spectrally variable objects are found to have a broad range of dynamical classes and absolute magnitudes, exhibit a broad range of apparent magnitude variations, and are found in both compositional classes. The spectrally variable objects with sufficiently accurate colors for spectral classification maintain their membership, belonging to the same class at both epochs. 2005 TV189 exhibits a sufficiently broad difference in color at the two epochs that span the full range of colors of the neutral class. This strongly argues that the neutral class is one single class with a broad range of colors, rather than the combination of multiple overlapping classes.« less

  3. Low mass companions to nearby stars: Spectral classification and its relation to the stellar/substellar break

    NASA Technical Reports Server (NTRS)

    Kirkpatrick, J. Davy; Mccarthy, Donald W., Jr.

    1994-01-01

    The relationship between mass and spectral class for main-sequence stars has never been obtained for dwarfs cooler than M6; currently, the true nature of objects classified as M7, M8, M9, or later (be they stellar or substellar) is not known. In this paper, spectral types for the components in five low mass binary systems are estimated based on previously published infrared speckle measurements, red/infrared photometry, and parallax data, together with newly acquired high signal-to-noise composite spectra of the systems and revised magnitude difference relations for M dwarfs. For two of these binaries, the secondary has a smaller mass (less than 0.09 solar mass) than any object having a dynamically measured mass and a known spectral type, thus extending the spectral class/mass relation to lower masses than has previously been possible. Data from the higher mass components (0.09 solar mass less than M less than 0.40 solar mass) are consistent with earlier results; the two lowest mass objects -- though having mass errors which could place them on either side of the M dwarf/brown dwarf dividing line (Mass is about 0.08 solar mass) -- are found to have spectral types no cooler than M6.5 V. An extrapolation of the updated spectral class/mass relation to the hydrogen-burning limit suggests that objects of type M7 and later may be substellar. Direct confirmation of this awaits the discovery of a close, very late-type binary for which dynamical masses can be measured.

  4. Extracting attosecond delays from spectrally overlapping interferograms

    NASA Astrophysics Data System (ADS)

    Jordan, Inga; Wörner, Hans Jakob

    2018-02-01

    Attosecond interferometry is becoming an increasingly popular technique for measuring the dynamics of photoionization in real time. Whereas early measurements focused on atomic systems with very simple photoelectron spectra, the technique is now being applied to more complex systems including isolated molecules and solids. The increase in complexity translates into an augmented spectral congestion, unavoidably resulting in spectral overlap in attosecond interferograms. Here, we discuss currently used methods for phase retrieval and introduce two new approaches for determining attosecond photoemission delays from spectrally overlapping photoelectron spectra. We show that the previously used technique, consisting in the spectral integration of the areas of interest, does in general not provide reliable results. Our methods resolve this problem, thereby opening the technique of attosecond interferometry to complex systems and fully exploiting its specific advantages in terms of spectral resolution compared to attosecond streaking.

  5. OSIRIS-REx and mission sample science: The return of at least 60 g of pristine regolith from asteroid Bennu

    NASA Astrophysics Data System (ADS)

    Connolly, H. C., Jr.; Lauretta, D. S.

    2014-07-01

    Introduction: The Origins, Spectral Interpretation, Resource Identification, and Security-Regolith Explorer (OSIRIS-REx) asteroid sample return mission was selected by NASA in May 2011 as the third New Frontiers mission. The target, (101955) Bennu, is a B-type near-Earth asteroid (NEA), hypothesized to be similar to CI or CM carbonaceous chondrites. The key science objectives of the mission are summarized in [1]. To meet these science objectives, the science team is coordinated and governed by the Science Executive Council (SEC): A group of six persons that run various elements of mission science. Mission Sample Science (MSS) is charged with analysis of the returned sample. Mission Sample Science: MSS is run by a Mission Scientist and composed of the following working groups: Carbonaceous Meteorite Working Group (CMWG), Dynamical Evolution Working Group (DEWG), Regolith Development Working Group (RDWG), Sample Analysis Working Group (SampleWG), Sample Site Science Working Group (SSSWG), and TAGSAM Working Group (TAGSAMWG). CMWG works to define and create well-characterized test samples, both natural and synthetic, for the development of spectral test data. These data are used to verify the depth and accuracy of spectral analysis techniques for processing data collected by the OSIRIS-REx spectrometers (OVIRS and OTES). The DEWG is charged with constraining the history of asteroid Bennu from main-belt asteroid to NEA. They also work closely with the SampleWG to define the hypotheses for the dynamical evolution of Bennu through the analysis of the returned sample. The RDWG is focused on developing constraints on the origin and evolution of regolith on Bennu through investigations of the surface geology and, working with the SampleWG, test these hypotheses through sample analysis. RDWG is also focused on the analysis of the sampling event and reconstructing what occurred during the event. SampleWG is focused on documenting Contamination Knowledge, which is distinct but related to mission Contamination Control. The main deliverable for this working group is the Sample Analysis Plan, due in 2019. Furthermore, it is this working group that is responsible for constituting the Preliminary Examination Team (PET) and performing the analyses of the returned sample during the first six months after return. SSSWG has the main deliverable of providing to the project the Science Value Maps (SVMs), which are part of the sample site selection process. If we can deliver the spacecraft to candidate sample sites, if it is safe to sample at them, and if there is material that can be ingested, SVMs will be a semi-quantitative aid in picking the optimum site to meet mission science goals. Finally, TAGSAM (Touch And Go Sample Acquisition Mechanism) is the sampler for the mission and this working group is concerned primarily with characterizing TAGSAM capabilities against a range of regolith types. Mission Sample Science provides an over-arching structure to reconstruct the pre- and post-accretion history of Bennu from the formation of pre-solar grains, chondrules, up to geological activity within the asteroid to its final dynamical evolution through analysis of the returned sample using a wide range of disciplines and expertise.

  6. Spectral analysis methods for vehicle interior vibro-acoustics identification

    NASA Astrophysics Data System (ADS)

    Hosseini Fouladi, Mohammad; Nor, Mohd. Jailani Mohd.; Ariffin, Ahmad Kamal

    2009-02-01

    Noise has various effects on comfort, performance and health of human. Sound are analysed by human brain based on the frequencies and amplitudes. In a dynamic system, transmission of sound and vibrations depend on frequency and direction of the input motion and characteristics of the output. It is imperative that automotive manufacturers invest a lot of effort and money to improve and enhance the vibro-acoustics performance of their products. The enhancement effort may be very difficult and time-consuming if one relies only on 'trial and error' method without prior knowledge about the sources itself. Complex noise inside a vehicle cabin originated from various sources and travel through many pathways. First stage of sound quality refinement is to find the source. It is vital for automotive engineers to identify the dominant noise sources such as engine noise, exhaust noise and noise due to vibration transmission inside of vehicle. The purpose of this paper is to find the vibro-acoustical sources of noise in a passenger vehicle compartment. The implementation of spectral analysis method is much faster than the 'trial and error' methods in which, parts should be separated to measure the transfer functions. Also by using spectral analysis method, signals can be recorded in real operational conditions which conduce to more consistent results. A multi-channel analyser is utilised to measure and record the vibro-acoustical signals. Computational algorithms are also employed to identify contribution of various sources towards the measured interior signal. These achievements can be utilised to detect, control and optimise interior noise performance of road transport vehicles.

  7. An Analysis of Cassini Observations Regarding the Structure of Jupiter's Equatorial Atmosphere

    NASA Technical Reports Server (NTRS)

    Choi, David S.; Simon-Miller, Amy A.

    2012-01-01

    A variety of intriguing atmospheric phenomena reside on both sides of Jupiter's equator. 5-micron bright hot spots and opaque plumes prominently exhibit dynamic behavior to the north, whereas compact, dark chevron-shaped features and isolated anticyclonic disturbances periodically occupy the southern equatorial latitudes. All of these phenomena are associated with the vertical and meridional perturbations of Rossby waves disturbing the mean atmospheric state. As previous observational analysis and numerical simulations have investigated the dynamics of the region, an examination of the atmosphere's vertical structure though radiative transfer analysis is necessary for improved understanding of this unique environment. Here we present preliminary analysis of a multispectral Cassini imaging data set acquired during the spacecraft's flyby of Jupiter in 2000. We evaluated multiple methane and continuum spectral channels at available viewing angles to improve constraints on the vertical structure of the haze and cloud layers comprising these interesting features. Our preliminary results indicate distinct differences in the structure for both hemispheres. Upper troposphere hazes and cloud layers are prevalent in the northern equatorial latitudes, but are not present in corresponding southern latitudes. Continued analysis will further constrain the precise structure present in these phenomena and the differences between them.

  8. Dynamic Deformation Measurements of an Aeroelastic Semispan Model. [conducted in the Transonic Dynamics Tunnel at the NASA Langley Research Center

    NASA Technical Reports Server (NTRS)

    Graves, Sharon S.; Burner, Alpheus W.; Edwards, John W.; Schuster, David M.

    2001-01-01

    The techniques used to acquire, reduce, and analyze dynamic deformation measurements of an aeroelastic semispan wind tunnel model are presented. Single-camera, single-view video photogrammetry (also referred to as videogrammetric model deformation, or VMD) was used to determine dynamic aeroelastic deformation of the semispan 'Models for Aeroelastic Validation Research Involving Computation' (MAVRIC) model in the Transonic Dynamics Tunnel at the NASA Langley Research Center. Dynamic deformation was determined from optical retroreflective tape targets at five semispan locations located on the wing from the root to the tip. Digitized video images from a charge coupled device (CCD) camera were recorded and processed to automatically determine target image plane locations that were then corrected for sensor, lens, and frame grabber spatial errors. Videogrammetric dynamic data were acquired at a 60-Hz rate for time records of up to 6 seconds during portions of this flutter/Limit Cycle Oscillation (LCO) test at Mach numbers from 0.3 to 0.96. Spectral analysis of the deformation data is used to identify dominant frequencies in the wing motion. The dynamic data will be used to separate aerodynamic and structural effects and to provide time history deflection data for Computational Aeroelasticity code evaluation and validation.

  9. [Spectral analysis of fiber bragg grating modulated by double long period grating and its application in smart structure monitoring].

    PubMed

    Lu, Ji-Yun; Liang, Da-Kai; Zhang, Xiao-Li; Zhu, Zhu

    2009-12-01

    Spectrum of fiber bragg grating (FBG) sensor modulated by double long period grating (LPFG) is proposed in the paper. Double LPFG consists of two LPFGS whose center wavelengths are the same and reflection spectrum of FBG sensor is located in linear range of double LPFG transmission spectrum. Based on spectral analysis of FBG and double LPFG, reflection spectrum of FBG modulated by double LPFG is obtained and studied by use of band-hider filter characteristics for double LPFG. An FBG sensor is attached on the surface of thin steel beam, which is strained by bending, and the center wavelength of FBG sensor will shift. The spectral peak of FBG sensor modulated by double LPFG is changed correspondingly, and the spectral change will lead to variation in exit light intensity from double LPFG. Experiment demonstrates that the relation of filtering light intensity from double LPFG monitored by optical power meter to center wavelength change of FBG sensor is linear and the minimum strain of material (steel beam) detected by the modulation and demodulation system is 1.05 microepsilon. This solution is used in impact monitoring of optical fibre smart structure, and FBG sensor is applied for impulse response signal monitoring induced by low-velocity impact, when impact pendulum is loaded to carbon fiber-reinforced plastics (CFP). The acquired impact response signal and fast Fourier transform of the signal detected by FBG sensor agree with the measurement results of eddy current displacement meter attached to the FBG sensor. From the results, the present method using FBG sensor is found to be effective for monitoring the impact. The research provides a practical reference in dynamic monitoring of optical fiber smart structure field.

  10. Solute-solvent interactions and dynamics probed by THz light

    NASA Astrophysics Data System (ADS)

    Schwaab, Gerhard; Böhm, Fabian; Ma, Chun-Yu; Havenith, Martina

    The THz range (1-12 THz, 30-400 cm-1) is especially suited to probe changes in the solvent dynamics induced by solutes of different character (hydrophobic, hydrophilic, charged, neutral). In recent years we have investigated a large variety of such solutes and found characteristic spectral fingerprints for ions, but also for uncharged solutes, such as alcohols. We will present a status report on our current understanding of the observed spectral changes and how they relate to physico-chemical parameters like hydration shell size or the lifetime of an excited intermolecular oscillation. In addition, we will show, that in some cases the spectral changes are closely related to the partition function yielding access to a microscopic understanding of macroscopic thermodynamic functions. The authors gratefully acknowledge financial support from the Cluster of Excellence RESOLV (Ruhr-Universität, EXC1069) funded by the Deutsche Forschungsgemeinschaft.

  11. Definition of a metrology servo-system for a solar imaging fourier transform spectrometer working in the far UV (IFTSUV)

    NASA Astrophysics Data System (ADS)

    Ruiz de Galarreta Fanju, C.; Philippon, A.; Bouzit, M.; Appourchaux, T.; Vial, J.-C.; Maillard, J.-P.; Lemaire, P.

    2017-11-01

    The understanding of the solar outer atmosphere requires a simultaneous combination of imaging and spectral observations concerning the far UV lines that arise from the high chromospheres up to the corona. These observations must be performed with enough spectral, spatial and temporal resolution to reveal the small atmospheric structures and to resolve the solar dynamics. An Imaging Fourier Transform Spectrometer working in the far-UV (IFTSUV, Figure 1) is an attractive instrumental solution to fulfill these requirements. However, due to the short wavelength, to preserve IFTSUV spectral precision and Signal to Noise Ratio (SNR) requires a high optical surface quality and a very accurate (linear and angular) metrology to maintain the optical path difference (OPD) during the entire scanning process by: optical path difference sampling trigger; and dynamic alignment for tip/tilt compensation (Figure 2).

  12. Water dynamics in small reverse micelles in two solvents: two-dimensional infrared vibrational echoes with two-dimensional background subtraction.

    PubMed

    Fenn, Emily E; Wong, Daryl B; Fayer, M D

    2011-02-07

    Water dynamics as reflected by the spectral diffusion of the water hydroxyl stretch were measured in w(0) = 2 (1.7 nm diameter) Aerosol-OT (AOT)/water reverse micelles in carbon tetrachloride and in isooctane solvents using ultrafast 2D IR vibrational echo spectroscopy. Orientational relaxation and population relaxation are observed for w(0) = 2, 4, and 7.5 in both solvents using IR pump-probe measurements. It is found that the pump-probe observables are sensitive to w(0), but not to the solvent. However, initial analysis of the vibrational echo data from the water nanopool in the reverse micelles in the isooctane solvent seems to yield different dynamics than the CCl(4) system in spite of the fact that the spectra, vibrational lifetimes, and orientational relaxation are the same in the two systems. It is found that there are beat patterns in the interferograms with isooctane as the solvent. The beats are observed from a signal generated by the AOT/isooctane system even when there is no water in the system. A beat subtraction data processing procedure does a reasonable job of removing the distortions in the isooctane data, showing that the reverse micelle dynamics are the same within experimental error regardless of whether isooctane or carbon tetrachloride is used as the organic phase. Two time scales are observed in the vibrational echo data, ~1 and ~10 ps. The slower component contains a significant amount of the total inhomogeneous broadening. Physical arguments indicate that there is a much slower component of spectral diffusion that is too slow to observe within the experimental window, which is limited by the OD stretch vibrational lifetime.

  13. Water dynamics in small reverse micelles in two solvents: Two-dimensional infrared vibrational echoes with two-dimensional background subtraction

    NASA Astrophysics Data System (ADS)

    Fenn, Emily E.; Wong, Daryl B.; Fayer, M. D.

    2011-02-01

    Water dynamics as reflected by the spectral diffusion of the water hydroxyl stretch were measured in w0 = 2 (1.7 nm diameter) Aerosol-OT (AOT)/water reverse micelles in carbon tetrachloride and in isooctane solvents using ultrafast 2D IR vibrational echo spectroscopy. Orientational relaxation and population relaxation are observed for w0 = 2, 4, and 7.5 in both solvents using IR pump-probe measurements. It is found that the pump-probe observables are sensitive to w0, but not to the solvent. However, initial analysis of the vibrational echo data from the water nanopool in the reverse micelles in the isooctane solvent seems to yield different dynamics than the CCl4 system in spite of the fact that the spectra, vibrational lifetimes, and orientational relaxation are the same in the two systems. It is found that there are beat patterns in the interferograms with isooctane as the solvent. The beats are observed from a signal generated by the AOT/isooctane system even when there is no water in the system. A beat subtraction data processing procedure does a reasonable job of removing the distortions in the isooctane data, showing that the reverse micelle dynamics are the same within experimental error regardless of whether isooctane or carbon tetrachloride is used as the organic phase. Two time scales are observed in the vibrational echo data, ~1 and ~10 ps. The slower component contains a significant amount of the total inhomogeneous broadening. Physical arguments indicate that there is a much slower component of spectral diffusion that is too slow to observe within the experimental window, which is limited by the OD stretch vibrational lifetime.

  14. Towards real-time non contact spatial resolved oxygenation monitoring using a multi spectral filter array camera in various light conditions

    NASA Astrophysics Data System (ADS)

    Bauer, Jacob R.; van Beekum, Karlijn; Klaessens, John; Noordmans, Herke Jan; Boer, Christa; Hardeberg, Jon Y.; Verdaasdonk, Rudolf M.

    2018-02-01

    Non contact spatial resolved oxygenation measurements remain an open challenge in the biomedical field and non contact patient monitoring. Although point measurements are the clinical standard till this day, regional differences in the oxygenation will improve the quality and safety of care. Recent developments in spectral imaging resulted in spectral filter array cameras (SFA). These provide the means to acquire spatial spectral videos in real-time and allow a spatial approach to spectroscopy. In this study, the performance of a 25 channel near infrared SFA camera was studied to obtain spatial oxygenation maps of hands during an occlusion of the left upper arm in 7 healthy volunteers. For comparison a clinical oxygenation monitoring system, INVOS, was used as a reference. In case of the NIRS SFA camera, oxygenation curves were derived from 2-3 wavelength bands with a custom made fast analysis software using a basic algorithm. Dynamic oxygenation changes were determined with the NIR SFA camera and INVOS system at different regional locations of the occluded versus non-occluded hands and showed to be in good agreement. To increase the signal to noise ratio, algorithm and image acquisition were optimised. The measurement were robust to different illumination conditions with NIR light sources. This study shows that imaging of relative oxygenation changes over larger body areas is potentially possible in real time.

  15. Comparing methods for analysis of biomedical hyperspectral image data

    NASA Astrophysics Data System (ADS)

    Leavesley, Silas J.; Sweat, Brenner; Abbott, Caitlyn; Favreau, Peter F.; Annamdevula, Naga S.; Rich, Thomas C.

    2017-02-01

    Over the past 2 decades, hyperspectral imaging technologies have been adapted to address the need for molecule-specific identification in the biomedical imaging field. Applications have ranged from single-cell microscopy to whole-animal in vivo imaging and from basic research to clinical systems. Enabling this growth has been the availability of faster, more effective hyperspectral filtering technologies and more sensitive detectors. Hence, the potential for growth of biomedical hyperspectral imaging is high, and many hyperspectral imaging options are already commercially available. However, despite the growth in hyperspectral technologies for biomedical imaging, little work has been done to aid users of hyperspectral imaging instruments in selecting appropriate analysis algorithms. Here, we present an approach for comparing the effectiveness of spectral analysis algorithms by combining experimental image data with a theoretical "what if" scenario. This approach allows us to quantify several key outcomes that characterize a hyperspectral imaging study: linearity of sensitivity, positive detection cut-off slope, dynamic range, and false positive events. We present results of using this approach for comparing the effectiveness of several common spectral analysis algorithms for detecting weak fluorescent protein emission in the midst of strong tissue autofluorescence. Results indicate that this approach should be applicable to a very wide range of applications, allowing a quantitative assessment of the effectiveness of the combined biology, hardware, and computational analysis for detecting a specific molecular signature.

  16. Investigation of computational and spectral analysis methods for aeroacoustic wave propagation

    NASA Technical Reports Server (NTRS)

    Vanel, Florence O.

    1995-01-01

    Most computational fluid dynamics (CFD) schemes are not adequately accurate for solving aeroacoustics problems, which have wave amplitudes several orders of magnitude smaller yet with frequencies larger than the flow field variations generating the sound. Hence, a computational aeroacoustics (CAA) algorithm should have minimal dispersion and dissipation features. A dispersion relation preserving (DRP) scheme is, therefore, applied to solve the linearized Euler equations in order to simulate the propagation of three types of waves, namely: acoustic, vorticity, and entropy waves. The scheme is derived using an optimization procedure to ensure that the numerical derivatives preserve the wave number and angular frequency of the partial differential equations being discretized. Consequently, simulated waves propagate with the correct wave speeds and exhibit their appropriate properties. A set of radiation and outflow boundary conditions, compatible with the DRP scheme and derived from the asymptotic solutions of the governing equations, are also implemented. Numerical simulations are performed to test the effectiveness of the DRP scheme and its boundary conditions. The computed solutions are shown to agree favorably with the exact solutions. The major restriction appears to be that the dispersion relations can be preserved only for waves with wave lengths longer than four or five spacings. The boundary conditions are found to be transparent to the outgoing disturbances. However, when the disturbance source is placed closer to a boundary, small acoustic reflections start appearing. CAA generates enormous amounts of temporal data which needs to be reduced to understand the physical problem being simulated. Spectral analysis is one approach that helps us in extracting information which often can not be easily interpreted in the time domain. Thus, three different methods for the spectral analysis of numerically generated aeroacoustic data are studied. First, the capabilities of two traditional methods for spectral analysis, namely, the Blackman-Tukey method and periodogram method, are compared in estimating the spectra of a simple-periodic process. The periodogram is then applied to analyze transitory-deterministic processes. Finally, these two methods are compared with a more recent method, referred as the Weighted-Overlapped-Segment-Averaging (WOSA) method, in estimating the spectra of a chaotic (random-like) process. From the demonstrative case for the spectral analyses of data generated by simple-periodic process, the periodogram method is found to give a better estimate of the steep-sloped spectra than the Blackman-Tukey method. Also, for this problem, the Hanning window is found to perform better with the periodogram method than with the Blackman-Tukey method. Finally, for the spectral analysis of data generated by the chaotic process, the periodogram method does not perform well, whereas, the WOSA and Blackman-Tukey methods give equivalently good results.

  17. Analysis of an Hp-Non-conforming Discontinuous Galerkin Spectral Element Method for Wave

    DTIC Science & Technology

    2011-04-01

    Scientific Computing, 36 (2008), pp. 351–390. [25] Eleuterio F . Toro , Riemann Solvers and Numerical Methods for Fluid Dynamics, Springer, 1999. [26...denoted by ñ, and the contravariant flux [15] is defined as F̃i = Jeai · F , i = 1, 2, 3, with ai as the contravariant basis vectors. We now describe...wave propagation case by the following definitions, q = ( E v ) ∈ V, Q = ( I 0 0 ρI ) , g = ( 0 f ) ∈ V, with I denoting the fourth-order identity tensor

  18. Observation of coherently enhanced tunable narrow-band terahertz transition radiation from a relativistic sub-picosecond electron bunch train

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Piot, P.; Sun, Y. -E; Maxwell, T. J.

    2011-06-27

    We experimentally demonstrate the production of narrow-band (δf/f ~ =20% at f ~ = 0.5 THz) THz transition radiation with tunable frequency over [0.37, 0.86] THz. The radiation is produced as a train of sub-picosecond relativistic electron bunches transits at the vacuum-aluminum interface of an aluminum converter screen. In addition, we show a possible application of modulated beams to extend the dynamical range of a popular bunch length diagnostic technique based on the spectral analysis of coherent radiation.

  19. Spectral Analysis for Weighted Iterated Triangulations of Graphs

    NASA Astrophysics Data System (ADS)

    Chen, Yufei; Dai, Meifeng; Wang, Xiaoqian; Sun, Yu; Su, Weiyi

    Much information about the structural properties and dynamical aspects of a network is measured by the eigenvalues of its normalized Laplacian matrix. In this paper, we aim to present a first study on the spectra of the normalized Laplacian of weighted iterated triangulations of graphs. We analytically obtain all the eigenvalues, as well as their multiplicities from two successive generations. As an example of application of these results, we then derive closed-form expressions for their multiplicative Kirchhoff index, Kemeny’s constant and number of weighted spanning trees.

  20. On the feasibility of a transient dynamic design analysis

    NASA Astrophysics Data System (ADS)

    Cunniff, Patrick F.; Pohland, Robert D.

    1993-05-01

    The Dynamic Design Analysis Method has been used for the past 30 years as part of the Navy's efforts to shock-harden heavy shipboard equipment. This method which has been validated several times employs normal mode theory and design shock values. This report examines the degree of success that may be achieved by using simple equipment-vehicle models that produce time history responses which are equivalent to the responses that would be achieved using spectral design values employed by the Dynamic Design Analysis Method. These transient models are constructed by attaching the equipment's modal oscillators to the vehicle which is composed of rigid masses and elastic springs. Two methods have been developed for constructing these transient models. Each method generates the parameters of the vehicles so as to approximate the required damaging effects, such that the transient model is excited by an idealized impulse applied to the vehicle mass to which the equipment modal oscillators are attached. The first method called the Direct Modeling Method, is limited to equipment with at most three-degrees of freedom and the vehicle consists of a single lumped mass and spring. The Optimization Modeling Method, which is based on the simplex method for optimization, has been used successfully with a variety of vehicle models and equipment sizes.

  1. Experimental investigation of a reacting transverse jet in a high pressure oscillating vitiated crossflow

    NASA Astrophysics Data System (ADS)

    Fugger, Christopher A.

    Staged combustion is one design approach in a gas turbine engine to reduce pollutant emission levels. In axially staged combustion, portions of the air and fuel are injected downstream of a lean premixed low NOx primary combustion zone. The gas residence time at elevated temperatures is decreased resulting in lower thermal NOx, and the reduced oxygen and high temperature vitiated primary zone flow further help to reduce pollutant emissions and quickly complete combustion. One implementation of axially staged combustion is transverse fuel jet injection. An important consideration for staged combustion systems, though, is how the primary and secondary combustion zones can couple through the acoustic resonances of the chamber. These couplings can lead to additional source terms that pump energy into the resonant acoustic field and help sustain the high-amplitude combustor pressure oscillations. An understanding of these couplings is important so that it may be possible to design a secondary combustion system that provides inherent damping to the combustor system. To systematically characterize the coupling of a reacting jet in unsteady crossflow in detail, the effects of an an unsteady pressure flowfield and an unsteady velocity flowfield are separately investigated. An optically accessible resonant combustion chamber was designed and built as part of this work to generate a standing wave unsteady vitiated crossflow at a chamber pressure of 0.9 MPa. The location of transverse jet injection corresponds to one of two locations, where one location is the pressure node and the other location the pressure anti-node of the resonant chamber acoustic mode. The injection location is optically accessible, and the dynamic interactions between the transverse jet flow and the 1st and 2nd axial combustor modes are measured using 10 kHz OH-PLIF and 2D PIV. This document analyzes five test cases: two non-reacting jets and three reacting jets. All cases correspond to jet injection near a pressure node of the 1st axial combustor mode, where the dominant flowfield fluctuations are a time-varying crossflow velocity. For the non-reacting jets, the nominal jet-to-crossflow momentum flux ratio is 19. For the reacting jets, the nominal jet-to-crossflow momentum flux ratio is 6. Two cross sectional planes parallel to the jet injection wall are investigated: 1 and 2.7 jet diameters from the jet injection wall. The combustor crossflow high frequency wall mounted pressure data is given for each test case. The velocity and OH-PLIF data is presented as instantaneous snapshots, time and phase averaged flowfields, modal decompositions using Proper Orthogonal Decomposition and Dynamic Mode Decomposition, and a jet cycle analysis relative to the crossflow acoustic cycle. Analysis of the five test cases shows that the jet cross sectional velocity and OH-PLIF dynamics display a multitude of dynamics. These are often organized into shear layer dynamics and wake dynamics, but are not mutually exclusive. For large unsteady crossflow velocity oscillations at the 1st axial combustor mode, both dynamics show strong organization at the unsteady crossflow frequency. Deciphering these dynamics is complicated by the fact that the ostensible jet response to the time-varying crossflow is a time-varying jet penetration. This drives the jet toward and away from the jet injection wall. These motions are perpendicular to the laser sheet and creates significant out-of-plane motions. The amplitude of crossflow unsteadiness appears to play a role in the sharpness of the wake dynamics. For the non-reacting cases, the wake dynamics are strong and dominant spectral features in the flowfield. For the reacting cases, the wake dynamics are spectrally distinct in the lower amplitude crossflow unsteadiness case, but a large unsteady amplitude crossflow appears to suppress the spectral bands in the frequency range corresponding to wake vortex dynamics.

  2. On a generalized Ablowitz-Kaup-Newell-Segur hierarchy in inhomogeneities of media: soliton solutions and wave propagation influenced from coefficient functions and scattering data

    NASA Astrophysics Data System (ADS)

    Zhang, Sheng; Hong, Siyu

    2018-07-01

    In this paper, a generalized Ablowitz-Kaup-Newell-Segur (AKNS) hierarchy in inhomogeneities of media described by variable coefficients is investigated, which includes some important nonlinear evolution equations as special cases, for example, the celebrated Korteweg-de Vries equation modeling waves on shallow water surfaces. To be specific, the known AKNS spectral problem and its time evolution equation are first generalized by embedding a finite number of differentiable and time-dependent functions. Starting from the generalized AKNS spectral problem and its generalized time evolution equation, a generalized AKNS hierarchy with variable coefficients is then derived. Furthermore, based on a systematic analysis on the time dependence of related scattering data of the generalized AKNS spectral problem, exact solutions of the generalized AKNS hierarchy are formulated through the inverse scattering transform method. In the case of reflectionless potentials, the obtained exact solutions are reduced to n-soliton solutions. It is graphically shown that the dynamical evolutions of such soliton solutions are influenced by not only the time-dependent coefficients but also the related scattering data in the process of propagations.

  3. Testing Solar Flare Models with BATSE

    NASA Astrophysics Data System (ADS)

    Zarro, Dominic M.

    1995-07-01

    We propose to use high-sensitivity Burst and Transient Source Experiment (BATSE) hard X-ray observations to test the thick-target and electric field acceleration models of solar flares. We will compare the predictions made by these models with hard X-ray spectral observations obtained with BATSE and simultaneous soft X-ray Ca XIX emission observed with the Yohkoh Bragg Crystal Spectrometer (BCS). The increased sensitivities of the BATSE and BCS (relative to previous detectors) permits a renewed study of the relationship between heating and dynamical motions during the crucial rise phase of flares. With these observations, we will: (1) investigate the ability of the thick-target model to explain the temporal evolution of hard X-ray emission relative to the soft X-ray blueshift during the earliest stages of the impulsive phase; and (2) search for evidence of electric-field acceleration as implied by temporal correlations between hard X-ray spectral breaks and the Ca XIX blueshift. The proposed study will utilize hard X-ray lightcurve and spectral measurements in the 10-100 keV energy range obtained with the BATSE Large Area Detectors (LAD). The DISCLA and CONT data will be the primary data products used in this analysis.

  4. A l% and 1cm Perspective Leads to a Novel CDOM Absorption Algorithm

    NASA Technical Reports Server (NTRS)

    Morrow, J. H.; Hooker, S. B.; Matsuoka, A.

    2012-01-01

    A next-generation in-water profiler designed to measure the apparent optical properties of seawater was developed and validated across a wide dynamic range of water properties. This new Compact-Optical Profiling System (C-OPS) design uses a novel, kite-shaped, free-falling backplane with adjustable buoyancy and is based on 19 state-of-the-art microradiometers, spanning 320-780 nm. Data collected as part of the field commissioning were of a previously unachievable quality and showed that systematic uncertainties in the sampling protocols were discernible at the 1% optical and 1cm depth resolution levels. A sensitivity analysis as a function of three water types, established by the peak in the remote sensing reflectance spectra, revealed which water types and spectral domains were the most indicative of data acquisition uncertainties. The unprecedented vertical resolution of C-OPS measurements provided near-surface data products at the spectral endpoints with a quality level that has not been obtainable. The improved data allowed development of an algorithm for predicting the spectral absorption due to chromophoric dissolved organic matter (CDOM) using ratios of diffuse attenuation coefficients with over 99% of the variance in the data explained.

  5. Herschel and the Molecular Universe

    NASA Technical Reports Server (NTRS)

    Tielens, A. G. G. M.; Helmich, F. P.

    2006-01-01

    Over the next decade, space-based missions will open up the universe to high spatial and spectral resolution studies at infrared and submillimeter wavelengths. This will allow us to study, in much greater detail, the composition and the origin and evolution of molecules in space. Moreover, molecular transitions in these spectral ranges provide a sensitive probe of the dynamics and the physical and chemical conditions in a wide range of objects at scales ranging from budding planetary systems to galactic and extragalactic sizes. Hence, these missions provide us with the tools to study key astrophysical and astrochemical processes involved in the formation and evolution of planets, stars, and galaxies. These new missions can be expected to lead to the detection of many thousands of new spectral features. Identification, analysis and interpretation of these features in terms of the physical and chemical characteristics of the astronomical sources will require detailed astronomical modeling tools supported by laboratory measurements and theoretical studies of chemical reactions and collisional excitation rates on species of astrophysical relevance. These data will have to be made easily accessible to the scientific community through web-based data archives. In this paper, we will review the Herschel mission and its expected impact on our understanding of the molecular universe.

  6. Bandwidth scalable, coherent transmitter based on the parallel synthesis of multiple spectral slices using optical arbitrary waveform generation.

    PubMed

    Geisler, David J; Fontaine, Nicolas K; Scott, Ryan P; He, Tingting; Paraschis, Loukas; Gerstel, Ori; Heritage, Jonathan P; Yoo, S J B

    2011-04-25

    We demonstrate an optical transmitter based on dynamic optical arbitrary waveform generation (OAWG) which is capable of creating high-bandwidth (THz) data waveforms in any modulation format using the parallel synthesis of multiple coherent spectral slices. As an initial demonstration, the transmitter uses only 5.5 GHz of electrical bandwidth and two 10-GHz-wide spectral slices to create 100-ns duration, 20-GHz optical waveforms in various modulation formats including differential phase-shift keying (DPSK), quaternary phase-shift keying (QPSK), and eight phase-shift keying (8PSK) with only changes in software. The experimentally generated waveforms showed clear eye openings and separated constellation points when measured using a real-time digital coherent receiver. Bit-error-rate (BER) performance analysis resulted in a BER < 9.8 × 10(-6) for DPSK and QPSK waveforms. Additionally, we experimentally demonstrate three-slice, 4-ns long waveforms that highlight the bandwidth scalable nature of the optical transmitter. The various generated waveforms show that the key transmitter properties (i.e., packet length, modulation format, data rate, and modulation filter shape) are software definable, and that the optical transmitter is capable of acting as a flexible bandwidth transmitter.

  7. EPR Studies of the Binding Properties, Guest Dynamics, and Inner-Space Dimensions of a Water-Soluble Resorcinarene Capsule.

    PubMed

    Ayhan, Mehmet Menaf; Casano, Gilles; Karoui, Hakim; Rockenbauer, Antal; Monnier, Valérie; Hardy, Micaël; Tordo, Paul; Bardelang, David; Ouari, Olivier

    2015-11-09

    Nitroxide free radicals have been used to study the inner space of one of Rebek's water-soluble capsules. EPR and (1) H NMR spectroscopy, ESI-MS, and DFT calculations showed a preference for the formation of 1:2 complexes. EPR titrations allowed us to determine binding constants (Ka ) in the order of 10(7)  M(-2) . EPR spectral-shape analysis provided information on the guest rotational dynamics within the capsule. The interplay between optimum hydrogen bonding upon capsule formation and steric strain for guest accommodation highlights some degree of flexibility for guest inclusion, particularly at the center of the capsule where the hydrogen bond seam can be barely distorted or slightly disturbed. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  8. [Systems analysis of colour music corrective effect].

    PubMed

    Gumeniuk, V A; Batova, N Ia; Mel'nikova, T S; Glazachev, O S; Golubeva, N K; Klimina, N V; Hubner, P

    1998-01-01

    In the context of P. K. Anokhin's theory of functional systems, the corrective effects of various combinations of medical therapeutical resonance music (MTRM) and dynamic colour exposure were analyzed. As compared to rehabilitative music programmes, MRTM was shown to have a more pronounced relaxing effect as manifested both in the optimization of emotion and in the activity of autonomic regulation of cardiovascular functions. On combined MRTM and dynamic colour flow exposures, the relaxing effect is most marked. In the examinees, the personality and situation anxieties diminish, mood improves, cardiovascular parameters become normal, the rate of metabolic processes and muscular rigidity reduce, the spectral power of alpha-rhythm increases, these occurring predominantly in the anterior region of the brain. The findings suggest the high efficiency of the chosen way of normalizing the functional status of man.

  9. Finite element analysis in fluids; Proceedings of the Seventh International Conference on Finite Element Methods in Flow Problems, University of Alabama, Huntsville, Apr. 3-7, 1989

    NASA Technical Reports Server (NTRS)

    Chung, T. J. (Editor); Karr, Gerald R. (Editor)

    1989-01-01

    Recent advances in computational fluid dynamics are examined in reviews and reports, with an emphasis on finite-element methods. Sections are devoted to adaptive meshes, atmospheric dynamics, combustion, compressible flows, control-volume finite elements, crystal growth, domain decomposition, EM-field problems, FDM/FEM, and fluid-structure interactions. Consideration is given to free-boundary problems with heat transfer, free surface flow, geophysical flow problems, heat and mass transfer, high-speed flow, incompressible flow, inverse design methods, MHD problems, the mathematics of finite elements, and mesh generation. Also discussed are mixed finite elements, multigrid methods, non-Newtonian fluids, numerical dissipation, parallel vector processing, reservoir simulation, seepage, shallow-water problems, spectral methods, supercomputer architectures, three-dimensional problems, and turbulent flows.

  10. Mesoscale Dynamical Regimes in the Midlatitudes

    NASA Astrophysics Data System (ADS)

    Craig, G. C.; Selz, T.

    2018-01-01

    The atmospheric mesoscales are characterized by a complex variety of meteorological phenomena that defy simple classification. Here a full space-time spectral analysis is carried out, based on a 7 day convection-permitting simulation of springtime midlatitude weather on a large domain. The kinetic energy is largest at synoptic scales, and on the mesoscale it is largely confined to an "advective band" where space and time scales are related by a constant of proportionality which corresponds to a velocity scale of about 10 m s-1. Computing the relative magnitude of different terms in the governing equations allows the identification of five dynamical regimes. These are tentatively identified as quasi-geostrophic flow, propagating gravity waves, stationary gravity waves related to orography, acoustic modes, and a weak temperature gradient regime, where vertical motions are forced by diabatic heating.

  11. Comparison of lithological mapping results from airborne hyperspectral VNIR-SWIR, LWIR and combined data

    NASA Astrophysics Data System (ADS)

    Feng, Jilu; Rogge, Derek; Rivard, Benoit

    2018-02-01

    This study investigates using the Airborne Hyperspectral Imaging Systems (AISA) visible and short-wave infrared (SWIR) and Spatially Enhanced Broadband Array Spectrograph System (SEBASS) longwave infrared (LWIR) (2 and 4 m spatial resolution, respectively) imagery independently and in combination to produce detailed lithologic maps in a subarctic region (Cape Smith Belt, Nunavik, Canada) where regionally metamorphosed lower greenschist mafic, ultramafic and sedimentary rocks are exposed in the presence of lichen coatings. We make use of continuous wavelet analysis (CWA) to improve the radiometric quality of the imagery through the minimization of random noise and the enhancement of spectral features, the minimization of residual errors in the ISAC radiometric correction and target temperature estimation in the case of the LWIR data, the minimization of line to line residual calibration effects that lead to inconsistencies in data mosaics, and the reduction in variability of the spectral continuum introduced by variable illumination and topography. The use of CWA also provides a platform to directly combine the wavelet scale spectral profiles of the SWIR and LWIR after applying a scalar correction factor to the LWIR such that the dynamic range of two data sets have equal weight. This is possible using CWA as the datasets are normalized to a zero mean allowing spectra from different spectral regions to be adjoined. Lithologic maps are generated using an iterative spectral unmixing approach with image spectral endmembers extracted from the SWIR and LWIR imagery based on locations defined from previous work of the study area and field mapping information. Unmixing results of the independent SWIR and LWIR data, and the combined data show clear benefits to using the CWA combined imagery. The analysis showed SWIR and LWIR imagery highlight similar regions and spatial distributions for the three ultramafic units (dunite, peridotite, pyroxenite). However, significant differences are observed for quartz-rich sediments, with the SWIR overestimating the distribution of these rocks whereas the LWIR provided more consistent results compared with existing maps. Both SWIR and LWIR imagery were impacted by the pervasive lichen coatings on the mafic rocks (basalts and gabbros), although the SWIR provided better results than the LWIR. Limitations observed for the independent data sets were removed using the combined spectral data resulting in all geologically meaningful units mapped correctly in comparison with existing geological maps.

  12. An Innovative Technique to Assess Spontaneous Baroreflex Sensitivity with Short Data Segments: Multiple Trigonometric Regressive Spectral Analysis.

    PubMed

    Li, Kai; Rüdiger, Heinz; Haase, Rocco; Ziemssen, Tjalf

    2018-01-01

    Objective: As the multiple trigonometric regressive spectral (MTRS) analysis is extraordinary in its ability to analyze short local data segments down to 12 s, we wanted to evaluate the impact of the data segment settings by applying the technique of MTRS analysis for baroreflex sensitivity (BRS) estimation using a standardized data pool. Methods: Spectral and baroreflex analyses were performed on the EuroBaVar dataset (42 recordings, including lying and standing positions). For this analysis, the technique of MTRS was used. We used different global and local data segment lengths, and chose the global data segments from different positions. Three global data segments of 1 and 2 min and three local data segments of 12, 20, and 30 s were used in MTRS analysis for BRS. Results: All the BRS-values calculated on the three global data segments were highly correlated, both in the supine and standing positions; the different global data segments provided similar BRS estimations. When using different local data segments, all the BRS-values were also highly correlated. However, in the supine position, using short local data segments of 12 s overestimated BRS compared with those using 20 and 30 s. In the standing position, the BRS estimations using different local data segments were comparable. There was no proportional bias for the comparisons between different BRS estimations. Conclusion: We demonstrate that BRS estimation by the MTRS technique is stable when using different global data segments, and MTRS is extraordinary in its ability to evaluate BRS in even short local data segments (20 and 30 s). Because of the non-stationary character of most biosignals, the MTRS technique would be preferable for BRS analysis especially in conditions when only short stationary data segments are available or when dynamic changes of BRS should be monitored.

  13. Observations and Numerical Modeling of the Jovian Ribbon

    NASA Technical Reports Server (NTRS)

    Cosentino, R. G.; Simon, A.; Morales-Juberias, R.; Sayanagi, K. M.

    2015-01-01

    Multiple wavelength observations made by the Hubble Space Telescope in early 2007 show the presence of a wavy, high-contrast feature in Jupiter's atmosphere near 30 degrees North. The "Jovian Ribbon," best seen at 410 nanometers, irregularly undulates in latitude and is time-variable in appearance. A meridional intensity gradient algorithm was applied to the observations to track the Ribbon's contour. Spectral analysis of the contour revealed that the Ribbon's structure is a combination of several wavenumbers ranging from k equals 8-40. The Ribbon is a dynamic structure that has been observed to have spectral power for dominant wavenumbers which vary over a time period of one month. The presence of the Ribbon correlates with periods when the velocity of the westward jet at the same location is highest. We conducted numerical simulations to investigate the stability of westward jets of varying speed, vertical shear, and background static stability to different perturbations. A Ribbon-like morphology was best reproduced with a 35 per millisecond westward jet that decreases in amplitude for pressures greater than 700 hectopascals and a background static stability of N equals 0.005 per second perturbed by heat pulses constrained to latitudes south of 30 degrees North. Additionally, the simulated feature had wavenumbers that qualitatively matched observations and evolved throughout the simulation reproducing the Jovian Ribbon's dynamic structure.

  14. Monitoring mechanistic details in the synthesis of pyrimidines via real-time, ultrafast multidimensional NMR spectroscopy

    PubMed Central

    Pardo, Zulay D.; Olsen, Greg; Fernández-Valle, María Encarnación; Frydman, Lucio; Martínez-Álvarez, Roberto; Herrera, Antonio

    2016-01-01

    Recent years have witnessed unprecedented advances in the development of fast multidimensional NMR acquisition techniques. This progress could open valuable new opportunities for the elucidation of chemical and biochemical processes. This study demonstrates one such capability, with the first real-time 2D dynamic analysis of a complex organic reaction relying on unlabeled substrates. Implementing such measurements required the development of new ultrafast 2D methods, capable of monitoring multiple spectral regions of interest as the reaction progressed. The alternate application of these acquisitions in an interleaved, excitation-optimized fashion, allowed us to extract new structural and dynamic insight concerning the reaction between aliphatic ketones and triflic anhydride in the presence of nitriles to yield alkylpyrimidines. Up to 2500 2D NMR data sets were thus collected over the course of this nearly 100 min long reaction, in an approach resembling that used in functional magnetic resonance imaging. With the aid of these new frequency-selective low-gradient-strength experiments, supplemented by chemical shift calculations of the spectral coordinates observed in the 2D heteronuclear correlations, previously postulated intermediates involved in the alkylpyrimidine formation process could be confirmed, and hitherto undetected ones were revealed. The potential and limitations of the resulting methods are discussed. PMID:22283498

  15. Mass constraints to Sco X-1 from Bowen fluorescence and deep near-infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Mata Sánchez, D.; Muñoz-Darias, T.; Casares, J.; Steeghs, D.; Ramos Almeida, C.; Acosta Pulido, J. A.

    2015-04-01

    More than 50 years after the dawn of X-ray astronomy, the dynamical parameters of the prototypical X-ray binary Sco X-1 are still unknown. We combine a Monte Carlo analysis, which includes all the previously known orbital parameters of the system, along with the K-correction to set dynamical constraints to the masses of the compact object (M1 < 1.73 M⊙) and the companion star (0.28 M⊙ < M2 < 0.70 M⊙). For the case of a canonical neutron star mass of M1 ˜ 1.4 M⊙, the orbital inclination is found to be lower than 40°. We also present the best near-infrared spectrum of the source to date. There is no evidence of donor star features on it, but we are able to constrain the veiling factor as a function of the spectral type of the secondary star. The combination of both techniques restricts the spectral type of the donor to be later than K4 and luminosity class IV. It also constrains the contribution of the companion light to the infrared emission of Sco X-1 to be lower than 33 per cent. This implies that the accretion related luminosity of the system in the K band is larger than ˜4 × 1035 erg s-1.

  16. Photoionization and electron radical recombination dynamics in photoactive yellow protein investigated by ultrafast spectroscopy in the visible and near-infrared spectral region.

    PubMed

    Zhu, Jingyi; Paparelli, Laura; Hospes, Marijke; Arents, Jos; Kennis, John T M; van Stokkum, Ivo H M; Hellingwerf, Klaas J; Groot, Marie Louise

    2013-09-26

    Photoinduced ionization of the chromophore inside photoactive yellow protein (PYP) was investigated by ultrafast spectroscopy in the visible and near-infrared spectral regions. An absorption band that extended from around 550 to 850 nm was observed and ascribed to solvated electrons, ejected from the p-hydroxycinnamic acid anion chromophore upon the absorption of two 400 nm photons. Global kinetic analysis showed that the solvated electron absorption decayed in two stages: a shorter phase of around 10 ps and a longer phase of more than 3 ns. From a simulation based on a diffusion model we conclude that the diffusion rate of the electron is about 0.8 Å(2)/ps in wild type PYP, and that the electron is ejected to a short distance of only several angstroms away from the chromophore. The chromophore-protein pocket appears to provide a water-similar local environment for the electron. Because mutations at different places around the chromophore have different effect on the electron recombination dynamics, we suggest that solvated electrons could provide a new method to investigate the local dielectric environment inside PYP and thus help to understand the role of the protein in the photoisomerization process.

  17. EEG dynamical correlates of focal and diffuse causes of coma.

    PubMed

    Kafashan, MohammadMehdi; Ryu, Shoko; Hargis, Mitchell J; Laurido-Soto, Osvaldo; Roberts, Debra E; Thontakudi, Akshay; Eisenman, Lawrence; Kummer, Terrance T; Ching, ShiNung

    2017-11-15

    Rapidly determining the causes of a depressed level of consciousness (DLOC) including coma is a common clinical challenge. Quantitative analysis of the electroencephalogram (EEG) has the potential to improve DLOC assessment by providing readily deployable, temporally detailed characterization of brain activity in such patients. While used commonly for seizure detection, EEG-based assessment of DLOC etiology is less well-established. As a first step towards etiological diagnosis, we sought to distinguish focal and diffuse causes of DLOC through assessment of temporal dynamics within EEG signals. We retrospectively analyzed EEG recordings from 40 patients with DLOC with consensus focal or diffuse culprit pathology. For each recording, we performed a suite of time-series analyses, then used a statistical framework to identify which analyses (features) could be used to distinguish between focal and diffuse cases. Using cross-validation approaches, we identified several spectral and non-spectral EEG features that were significantly different between DLOC patients with focal vs. diffuse etiologies, enabling EEG-based classification with an accuracy of 76%. Our findings suggest that DLOC due to focal vs. diffuse injuries differ along several electrophysiological parameters. These results may form the basis of future classification strategies for DLOC and coma that are more etiologically-specific and therefore therapeutically-relevant.

  18. RECONNECTION PROPERTIES OF LARGE-SCALE CURRENT SHEETS DURING CORONAL MASS EJECTION ERUPTIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lynch, B. J.; Kazachenko, M. D.; Edmondson, J. K.

    2016-07-20

    We present a detailed analysis of the properties of magnetic reconnection at large-scale current sheets (CSs) in a high cadence version of the Lynch and Edmondson 2.5D MHD simulation of sympathetic magnetic breakout eruptions from a pseudostreamer source region. We examine the resistive tearing and break-up of the three main CSs into chains of X- and O-type null points and follow the dynamics of magnetic island growth, their merging, transit, and ejection with the reconnection exhaust. For each CS, we quantify the evolution of the length-to-width aspect ratio (up to ∼100:1), Lundquist number (∼10{sup 3}), and reconnection rate (inflow-to-outflow ratiosmore » reaching ∼0.40). We examine the statistical and spectral properties of the fluctuations in the CSs resulting from the plasmoid instability, including the distribution of magnetic island area, mass, and flux content. We show that the temporal evolution of the spectral index of the reconnection-generated magnetic energy density fluctuations appear to reflect global properties of the CS evolution. Our results are in excellent agreement with recent, high-resolution reconnection-in-a-box simulations even though our CSs’ formation, growth, and dynamics are intrinsically coupled to the global evolution of sequential sympathetic coronal mass ejection eruptions.« less

  19. Possibility of successive SRXFA use along with chemical-spectral methods for palladium analysis in geological samples

    NASA Astrophysics Data System (ADS)

    Kislov, E. V.; Kulikov, A. A.; Kulikova, A. B.

    1989-10-01

    Samples of basit-ultrabasit rocks and NiCu ores of the Ioko-Dovyren and Chaya massifs were analysed by SRXFA and a chemical-spectral method. SRXFA perfectly satisfies the quantitative noble-metals analysis of ore-free rocks. Combination of SRXFA and chemical-spectral analysis has good prospects. After analysis of a great number of samples by SRXFA it is necessary to select samples which would show minimal and maximal results for the chemical-spectral method.

  20. The Spectral Signatures Of BH Versus NS Sources

    NASA Astrophysics Data System (ADS)

    Seifina, E.; Titarchuk, L.

    2011-09-01

    We present a comparative analysis of spectral properties of Black Hole (BH) and Neutron Star (NS) X-ray binaries during transition events observed with BeppoSAX and RXTE satellites. In particular, we investigated the behavior of Comptonized component of X-ray spectra when object evolves from the low to high spectral states. The basic models to fit X-ray spectra of these objects are upscattering models (so called BMC and COMPTB models) which are the first principal models. These models taking into account both dynamical and thermal Comptonization and allow to study separate contributions of thermal component and Comptonization component (bulk and thermal effect of Comptonization processes). Specifically, we tested quite a few observations of BHs (GRS 1915+105 and SS 433) and NSs (4U 1728-34 and GX 3+1) applying BMC and COMPTB models. In this way it was found a crucial difference in behavior of photon index vs mass accretion rate (mdot) for BHs and NSs. Namely, we revealed the stability of the photon index around typical value of Gamma=2 versus mdot (or electron temperature) during spectral evolution of NS sources. This stability effect was previously suggested for a number of other neutron binaries (see Farinelli and Titarchuk, 2011). This intrinsic property of NS is fundamentally different from that in BH binary sources for which the index demonstrates monotonic growth with mass accretion rate followed by its saturation at high values of mdot. These index-mass accretion rate behavior during X-ray spectral transition events can be considered as signatures, which allow to differ NS from BH.

Top