Fast, high-resolution 3D dosimetry utilizing a novel optical-CT scanner incorporating tertiary telecentric collimation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sakhalkar, H. S.; Oldham, M.

2008-01-15

This study introduces a charge coupled device (CCD) area detector based optical-computed tomography (optical-CT) scanner for comprehensive verification of radiation dose distributions recorded in nonscattering radiochromic dosimeters. Defining characteristics include: (i) a very fast scanning time of {approx}5 min to acquire a complete three-dimensional (3D) dataset, (ii) improved image formation through the use of custom telecentric optics, which ensures accurate projection images and minimizes artifacts from scattered and stray-light sources, and (iii) high resolution (potentially 50 {mu}m) isotropic 3D dose readout. The performance of the CCD scanner for 3D dose readout was evaluated by comparison with independent 3D readout frommore » the single laser beam OCTOPUS-scanner for the same PRESAGE dosimeters. The OCTOPUS scanner was considered the 'gold standard' technique in light of prior studies demonstrating its accuracy. Additional comparisons were made against calculated dose distributions from the ECLIPSE treatment-planning system. Dose readout for the following treatments were investigated: (i) a single rectangular beam irradiation to investigate small field and very steep dose gradient dosimetry away from edge effects, (ii) a 2-field open beam parallel-opposed irradiation to investigate dosimetry along steep dose gradients, and (iii) a 7-field intensity modulated radiation therapy (IMRT) irradiation to investigate dosimetry for complex treatment delivery involving modulation of fluence and for dosimetry along moderate dose gradients. Dose profiles, dose-difference plots, and gamma maps were employed to evaluate quantitative estimates of agreement between independently measured and calculated dose distributions. Results indicated that dose readout from the CCD scanner was in agreement with independent gold-standard readout from the OCTOPUS-scanner as well as the calculated ECLIPSE dose distribution for all treatments, except in regions within a few millimeters of the edge of the dosimeter, where edge artifact is predominant. Agreement of line profiles was observed, even along steep dose gradients. Dose difference plots indicated that the CCD scanner dose readout differed from the OCTOPUSscanner readout and ECLIPSE calculations by {approx}10% along steep dose gradients and by {approx}5% along moderate dose gradients. Gamma maps (3% dose-difference and 3 mm distance-to-agreement acceptance criteria) revealed agreement, except for regions within 5 mm of the edge of the dosimeter where the edge artifact occurs. In summary, the data demonstrate feasibility of using the fast, high-resolution CCD scanner for comprehensive 3D dosimetry in all applications, except where dose readout is required close to the edges of the dosimeter. Further work is ongoing to reduce this artifact.« less

Light sheet microscopy reveals more gradual light attenuation in light green versus dark green soybean leaves

USDA-ARS?s Scientific Manuscript database

Light wavelengths preferentially absorbed by chlorophyll (chl) often display steep absorption gradients. This oversaturates photosynthesis in upper chloroplasts and deprives lower chloroplasts of blue and red light, causing a steep gradient in carbon fixation. Reducing chl content could create a mor...

Landslides control the spatial and temporal variation of channel width in southern Taiwan: implications for landscape evolution and cascading hazards in steep, tectonically active landscapes

NASA Astrophysics Data System (ADS)

Yanites, B.; Bregy, J. C.; Carlson, G.; Cataldo, K.; Holahan, M.; Johnston, G.; Mitchell, N. A.; Nelson, A.; Valenza, J.; Wanker, M.

2017-12-01

Intense precipitation or seismic events can generate clustered mass movement processes across a landscape. These rare events have significant impacts on the landscape, however, the rarity of such events leads to uncertainty in how these events impact the entire geomorphic system over a range of timescales. Taiwan is a steep, seismically active region and is highly prone to landslide and debris flows, especially when exposed to heavy rainfall events. Typhoon Morakot made landfall in Taiwan in August of 2009, delivering record-breaking rainfall and inducing more than 22,000 landslides in southern Taiwan. The topographic gradient in southern Taiwan leads to spatial variability in landslide susceptibility providing an opportunity to infer the long-term impact of landslides on channel morphology. The availability of pre and post typhoon imagery allows a quantitative reconstruction on the propagating impact of this event on channel width. The pre and post typhoon patterns of channel width to river and hillslope gradients in 20 basins in the study area reveal the importance of cascading hazards from landslides on landscape evolution. Prior to Typhoon Morakot, the river channels in the central part of the study area were about 3-10 times wider than the channels in the south. Aggradation and widening was also a maximum in these basins where hillslope gradients and channel steepness is high. The results further show that the narrowest channels are located where channel steepness is the lowest, an observation inconsistent with a detachment-limited model for river evolution. We infer this pattern is indicative of a strong role of sediment supply, and associated landslide events, on long-term channel evolution. These findings have implications across a range of spatial and temporal scales including understanding the cascade of hazards in steep landscapes and geomorphic interpretation of channel morphology.

Cell Blebbing in Confined Microfluidic Environments

PubMed Central

Ibo, Markela; Srivastava, Vasudha; Robinson, Douglas N.; Gagnon, Zachary R.

2016-01-01

Migrating cells can extend their leading edge by forming myosin-driven blebs and F-actin-driven pseudopods. When coerced to migrate in resistive environments, Dictyostelium cells switch from using predominately pseudopods to blebs. Bleb formation has been shown to be chemotactic and can be influenced by the direction of the chemotactic gradient. In this study, we determine the blebbing responses of developed cells of Dictyostelium discoideum to cAMP gradients of varying steepness produced in microfluidic channels with different confining heights, ranging between 1.7 μm and 3.8 μm. We show that microfluidic confinement height, gradient steepness, buffer osmolarity and Myosin II activity are important factors in determining whether cells migrate with blebs or with pseudopods. Dictyostelium cells were observed migrating within the confines of microfluidic gradient channels. When the cAMP gradient steepness is increased from 0.7 nM/μm to 20 nM/μm, cells switch from moving with a mixture of blebs and pseudopods to moving only using blebs when chemotaxing in channels with confinement heights less than 2.4 μm. Furthermore, the size of the blebs increases with gradient steepness and correlates with increases in myosin-II localization at the cell cortex. Reduction of intracellular pressure by high osmolarity buffer or inhibition of myosin-II by blebbistatin leads to a decrease in bleb formation and bleb size. Together, our data reveal that the protrusion type formed by migrating cells can be influenced by the channel height and the steepness of the cAMP gradient, and suggests that a combination of confinement-induced myosin-II localization and cAMP-regulated cortical contraction leads to increased intracellular fluid pressure and bleb formation. PMID:27706201

Properties of two-fluid flowing equilibria observed in double-pulsing coaxial helicity injection on HIST

NASA Astrophysics Data System (ADS)

Kanki, T.; Nagata, M.

2013-10-01

Multi-pulsing coaxial helicity injection (M-CHI) method which aims to achieve both quasi-steady sustainment and good confinement has been proposed as a refluxing scenario of the CHI. To explore the usefulness of the M-CHI for spherical torus (ST) configurations, the double-pulsing operations have been carried out in the HIST, verifying the flux amplification and the formation of the closed flux surfaces after the second CHI pulse. The purpose of this study is to investigate the properties of the magnetic field and plasma flow structures during the sustainment by comparing the results of plasma flow, density, and magnetic fields measurements with those of two-fluid equilibrium calculations. The two-fluid flowing equilibrium model which is described by a pair of generalized Grad-Shafranov equations for ion and electron surface variables and Bernoulli equations for density is applied to reconstruct the ST configuration with poloidal flow shear observed in the HIST. Due to the negative steep density gradient in high field side, the toroidal field has a diamagnetic profile (volume average beta, < β > = 68 %) in the central open flux column region. The ion flow velocity with strong flow shear from the separatrix in the inboard side to the core region is the opposite direction to the electron flow velocity due to the diamagentic drift through the density gradient. The electric field is relatively small in the whole region, and thus the Lorentz force nearly balances with the two-fluid effect which is particularly significant in a region with the steep density gradient due to the ion and electron diamagnetic drifts.

Progress in understanding the enhanced pedestal H-mode in NSTX

DOE PAGES

Gerhardt, S. P.; Canik, J. M.; Maingi, R.; ...

2014-08-01

The paper describes the enhanced pedestal (EP) H-mode observed in the National Spherical Torus Experiment (NSTX). The defining characteristics of EP H-mode are given, namely i)transition after the L- to H-mode transition, ii) region of very steep ion temperature gradient, and iii) associated region of strong rotational shear. A newly observed long-pulse EP H-mode example shows quiescent behavior for as long as the heating and current drive sources are maintained. Cases are shown where the region of steep ion temperature gradient is located at the very edge, and cases where it is shifted up to 10 cm inward from themore » plasma edge; these cases are united by a common dependence of the ion temperature gradient on the toroidal rotation frequency shear. EP H-mode examples have been observed across a wide range of q95 and pedestal collisionality. No strong changes in the fluctuation amplitudes have been observed following the eP H-mode transition, and transport analysis indicates that the ion t hermal transport is comparable to or less than anticipated from a simple neoclassical transport model. Cases are shown where EP H-modes were reliably generated, through these low-q95 examples were difficult to sustain. A case where an externally triggered ELM precipitates the transition to EP H-mode is also shown, though an initial experiment designed to trigger EP-H-modes in this fashion was successful.« less

Gaseous templates in ant nests.

PubMed

Cox, M D; Blanchard, G B

2000-05-21

We apply a diffusion model to the atmosphere of ant nests. With particular reference to carbon dioxide (CO2), we explore analytically and numerically the spatial and temporal patterns of brood- or worker-produced gases in nests. The maximum concentration within a typical one-chamber ant nest with approximately 200 ants can reach 12.5 times atmospheric concentration, reaching 95% of equilibrium concentrations within 15 min. Maximum concentration increases with increasing number of ants in the nest (or production rate of the gas), distance between the centre of the nest ants and the nest entrance, entrance length, wall thickness, and with decreasing entrance width, wall permeability and diffusion coefficient. The nest can be divided into three qualitatively distinct regions according to the shape of the gradient: a plateau of high concentration in the back half of the nest; an intermediate region of increasingly steep gradient towards the entrance; and a steep linear gradient in the entrance tunnel. These regions are robust to changes in gas concentrations, but vary with changes in nest architecture. The pattern of diffusing gases contains information about position and orientation relative to gas sources and sinks, and about colony state, including colony size, activity state and aspects of nest architecture. We discuss how this diffusion pattern may act as a "dynamic template", providing local cues which trigger behavioural acts appropriate to colony needs, which in turn may feed back to changes in the gas template. In particular, wall building occurs along lines of similar concentration for a variety of nest geometries; there is surprising convergence between the period of cycles of synchronously active ants and the time taken for CO2 levels to equilibrate; and the qualitatively distinct regions of the "dynamic template" correspond to regions occupied by different groups of ants.

Outer midplane scrape-off layer profiles and turbulence in simulations of Alcator C-Mod inner-wall limited discharges

DOE PAGES

Halpern, Federico D.; LaBombard, Brian; Terry, James L.; ...

2017-06-27

A region of steep plasma gradients, the so-called ”narrow-feature”, has been found in the near scrape-off layer (SOL) of inner-wall limited (IWL) discharges. Dedicated IWL discharges were carried out in Alcator C-Mod [E.S. Marmar et al., Nucl. Fusion 55, (2015)] to study this phenomenon, allowing detailed observations of the plasma profiles and fluctuations. Langmuir probe (LP) measurements show a clear two decay length n e and T e profile structure at the outer midplane. The Gas-Puff Imaging (GPI) diagnostic shows large turbulent fluctuations across the last closed flux-surface, hence supporting the hypothesis that turbulent phenomena play a role in settingmore » the profile steepness. We have carried out the flux-driven non-linear turbulence simulations of two C-Mod discharges which allows a three-way comparison between LP, GPI, and simulation data. Observations and simulations correlate the steep gradient region characterizing the narrow feature with sheared poloidal flows and a deviation of the plasma potential from its floating value. Furthermore, the E x B shear rate exceeds the linear ballooning growth rate, indicating that the narrow feature could result from the effects of sheared flows, although causality could not be established. The fluctuation level in the narrow feature remains of order unity across the entire SOL, indicating that the transport reduction in the near-SOL cannot result from a simple quench rule.« less

Outer midplane scrape-off layer profiles and turbulence in simulations of Alcator C-Mod inner-wall limited discharges

DOE Office of Scientific and Technical Information (OSTI.GOV)

Halpern, Federico D.; LaBombard, Brian; Terry, James L.

A region of steep plasma gradients, the so-called ”narrow-feature”, has been found in the near scrape-off layer (SOL) of inner-wall limited (IWL) discharges. Dedicated IWL discharges were carried out in Alcator C-Mod [E.S. Marmar et al., Nucl. Fusion 55, (2015)] to study this phenomenon, allowing detailed observations of the plasma profiles and fluctuations. Langmuir probe (LP) measurements show a clear two decay length n e and T e profile structure at the outer midplane. The Gas-Puff Imaging (GPI) diagnostic shows large turbulent fluctuations across the last closed flux-surface, hence supporting the hypothesis that turbulent phenomena play a role in settingmore » the profile steepness. We have carried out the flux-driven non-linear turbulence simulations of two C-Mod discharges which allows a three-way comparison between LP, GPI, and simulation data. Observations and simulations correlate the steep gradient region characterizing the narrow feature with sheared poloidal flows and a deviation of the plasma potential from its floating value. Furthermore, the E x B shear rate exceeds the linear ballooning growth rate, indicating that the narrow feature could result from the effects of sheared flows, although causality could not be established. The fluctuation level in the narrow feature remains of order unity across the entire SOL, indicating that the transport reduction in the near-SOL cannot result from a simple quench rule.« less

Do Mexican immigrants "import" social gradients in health to the US?

PubMed

Buttenheim, Alison; Goldman, Noreen; Pebley, Anne R; Wong, Rebeca; Chung, Chang

2010-10-01

Greater educational attainment is consistently associated with lower mortality and better health, a pattern known as the social gradient. However, recent research suggests that Mexican-origin adults in the US have weak or flat gradients, in contrast to steep gradients for non-Hispanic whites. In this study we evaluate one hypothesis for this finding: Is the relative weakness of education gradients in health behaviors observed among Mexican-origin adults in the US due to weak gradients in the sending population? We test this "imported gradients" hypothesis with data from two nationally-representative datasets: the US National Health Interview Survey (NHIS) and the Mexican National Health Survey (ENSA 2000). We compare education gradients in smoking and obesity for recently-arrived Mexican immigrants in the US to the corresponding gradients in high-migration regions of Mexico. Results partially support the imported gradients hypothesis and have implications for health education and promotion programs targeted to immigrant populations to reduce racial and ethnic disparities in health in the US.

Kinetic simulation of edge instability in fusion plasmas

NASA Astrophysics Data System (ADS)

Fulton, Daniel Patrick

In this work, gyrokinetic simulations in edge plasmas of both tokamaks and field reversed. configurations (FRC) have been carried out using the Gyrokinetic Toroidal Code (GTC) and A New Code (ANC) has been formulated for cross-separatrix FRC simulation. In the tokamak edge, turbulent transport in the pedestal of an H-mode DIII-D plasma is. studied via simulations of electrostatic driftwaves. Annulus geometry is used and simulations focus on two radial locations corresponding to the pedestal top with mild pressure gradient and steep pressure gradient. A reactive trapped electron instability with typical ballooning mode structure is excited in the pedestal top. At the steep gradient, the electrostatic instability exhibits unusual mode structure, peaking at poloidal angles theta=+- pi/2. Simulations find this unusual mode structure is due to steep pressure gradients in the pedestal but not due to the particular DIII-D magnetic geometry. Realistic DIII-D geometry has a stabilizing effect compared to a simple circular tokamak geometry. Driftwave instability in FRC is studied for the first time using gyrokinetic simulation. GTC. is upgraded to treat realistic equilibrium calculated by an MHD equilibrium code. Electrostatic local simulations in outer closed flux surfaces find ion-scale modes are stable due to the large ion gyroradius and that electron drift-interchange modes are excited by electron temperature gradient and bad magnetic curvature. In the scrape-off layer (SOL) ion-scale modes are excited by density gradient and bad curvature. Collisions have weak effects on instabilities both in the core and SOL. Simulation results are consistent with density fluctuation measurements in the C-2 experiment using Doppler backscattering (DBS). The critical density gradients measured by the DBS qualitatively agree with the linear instability threshold calculated by GTC simulations. One outstanding critical issue in the FRC is the interplay between turbulence in the FRC. core and SOL regions. While the magnetic flux coordinates used by GTC provide a number of computational advantages, they present unique challenges at the magnetic field separatrix. To address this limitation, a new code, capable of coupled core-SOL simulations, is formulated, implemented, and successfully verified.

Drift and Behavior of E. coli Cells

NASA Astrophysics Data System (ADS)

Micali, Gabriele; Colin, Rémy; Sourjik, Victor; Endres, Robert G.

2017-12-01

Chemotaxis of the bacterium Escherichia coli is well understood in shallow chemical gradients, but its swimming behavior remains difficult to interpret in steep gradients. By focusing on single-cell trajectories from simulations, we investigated the dependence of the chemotactic drift velocity on attractant concentration in an exponential gradient. While maxima of the average drift velocity can be interpreted within analytical linear-response theory of chemotaxis in shallow gradients, limits in drift due to steep gradients and finite number of receptor-methylation sites for adaptation go beyond perturbation theory. For instance, we found a surprising pinning of the cells to the concentration in the gradient at which cells run out of methylation sites. To validate the positions of maximal drift, we recorded single-cell trajectories in carefully designed chemical gradients using microfluidics.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Haskey, S. R.; Grierson, B. A.; Stagner, L.

Recent completion of the thirty two channel main-ion (deuterium) charge exchange recombination spectroscopy (CER) diagnostic on DIII-D enables detailed comparisons between impurity and main-ion temperature, density, and toroidal rotation. Sixteen sightlines cover the core of the plasma and another sixteen are densely packed towards the edge, providing high resolution measurements of the pedestal and steep gradient edge region of H-mode plasmas. The complexities of the D α spectrum require fitting with a comprehensive model, as well as using iterative collisional radiative modeling to determine the underlying thermal deuterium ion properties. Large differences in the structure and magnitude of impurity (Cmore » 6+) and main-ion (D +) toroidal rotation profiles are seen in the H-mode pedestal. Additionally the D + temperature can be half the value of the C 6+ temperature at the separatrix and shows more of a pedestal structure. Typically only the impurity properties are measured and the main-ion properties are either assumed to be the same, or inferred using neoclassical models, which require validation in the steep gradient region. Furthermore, these measured differences have implications for transport model validation, intrinsic rotation studies, pedestal stability, and the boundary conditions for scrape off layer and plasma material interactions studies.« less

Water resources of the River Rouge basin southeastern Michigan

USGS Publications Warehouse

Knutilla, R.L.

1971-01-01

The River Rouge basin is characterized by moderately hilly topography to the northwest graduating to a relatively level land surface to the south east.Stream gradients near the northwestern basin divide are relatively steep; but many become more steep in reaches where they cross beach lines of former glacial lakes. In the lower reaches of the River Rouge gradients lessen.

Do Mexican immigrants “import” social gradients in health to the US?

PubMed Central

Buttenheim, Alison; Goldman, Noreen; Pebley, Anne R; Wong, Rebeca; Chung, Chang

2011-01-01

Greater educational attainment is consistently associated with lower mortality and better health, a pattern known as the social gradient. However, recent research suggests that Mexican-origin adults in the US have weak or flat gradients, in contrast to steep gradients for non-Hispanic whites. In this study we evaluate one hypothesis for this finding: Is the relative weakness of education gradients in health behaviors observed among Mexican-origin adults in the US due to weak gradients in the sending population? We test this “imported gradients” hypothesis with data from two nationally-representative datasets: the US National Health Interview Survey (NHIS) and the Mexican National Health Survey (ENSA 2000). We compare education gradients in smoking and obesity for recently-arrived Mexican immigrants in the US to the corresponding gradients in high-migration regions of Mexico. Results partially support the imported gradients hypothesis and have implications for health education and promotion programs targeted to immigrant populations to reduce racial and ethnic disparities in health in the US. PMID:20692753

Unveiling a phytoplankton hotspot at a narrow boundary between coastal and offshore waters

PubMed Central

Ribalet, Francois; Marchetti, Adrian; Hubbard, Katherine A.; Brown, Kristina; Durkin, Colleen A.; Morales, Rhonda; Robert, Marie; Swalwell, Jarred E.; Tortell, Philippe D.; Armbrust, E. Virginia

2010-01-01

In terrestrial ecosystems, transitional areas between different plant communities (ecotones) are formed by steep environmental gradients and are commonly characterized by high species diversity and primary productivity, which in turn influences the foodweb structure of these regions. Whether comparable zones of elevated diversity and productivity characterize ecotones in the oceans remains poorly understood. Here we describe a previously hidden hotspot of phytoplankton diversity and productivity in a narrow but seasonally persistent transition zone at the intersection of iron-poor, nitrate-rich offshore waters and iron-rich, nitrate-poor coastal waters of the Northeast Pacific Ocean. Novel continuous measurements of phytoplankton cell abundance and composition identified a complex succession of blooms of five distinct size classes of phytoplankton populations within a 100-km–wide transition zone. The blooms appear to be fueled by natural iron enrichment of offshore communities as they are transported toward the coast. The observed succession of phytoplankton populations is likely driven by spatial gradients in iron availability or time since iron enrichment. Regardless of the underlying mechanism, the resulting communities have a strong impact on the regional biogeochemistry as evidenced by the low partial pressure of CO2 and the nearly complete depletion of nutrients. Enhanced phytoplankton productivity and diversity associated with steep environmental gradients are expected wherever water masses with complementary nutrient compositions mix to create a region more favorable for phytoplankton growth. The ability to detect and track these important but poorly characterized marine ecotones is critical for understanding their impact on productivity and ecosystem structure in the oceans. PMID:20823224

Unveiling a phytoplankton hotspot at a narrow boundary between coastal and offshore waters.

PubMed

Ribalet, Francois; Marchetti, Adrian; Hubbard, Katherine A; Brown, Kristina; Durkin, Colleen A; Morales, Rhonda; Robert, Marie; Swalwell, Jarred E; Tortell, Philippe D; Armbrust, E Virginia

2010-09-21

In terrestrial ecosystems, transitional areas between different plant communities (ecotones) are formed by steep environmental gradients and are commonly characterized by high species diversity and primary productivity, which in turn influences the foodweb structure of these regions. Whether comparable zones of elevated diversity and productivity characterize ecotones in the oceans remains poorly understood. Here we describe a previously hidden hotspot of phytoplankton diversity and productivity in a narrow but seasonally persistent transition zone at the intersection of iron-poor, nitrate-rich offshore waters and iron-rich, nitrate-poor coastal waters of the Northeast Pacific Ocean. Novel continuous measurements of phytoplankton cell abundance and composition identified a complex succession of blooms of five distinct size classes of phytoplankton populations within a 100-km-wide transition zone. The blooms appear to be fueled by natural iron enrichment of offshore communities as they are transported toward the coast. The observed succession of phytoplankton populations is likely driven by spatial gradients in iron availability or time since iron enrichment. Regardless of the underlying mechanism, the resulting communities have a strong impact on the regional biogeochemistry as evidenced by the low partial pressure of CO(2) and the nearly complete depletion of nutrients. Enhanced phytoplankton productivity and diversity associated with steep environmental gradients are expected wherever water masses with complementary nutrient compositions mix to create a region more favorable for phytoplankton growth. The ability to detect and track these important but poorly characterized marine ecotones is critical for understanding their impact on productivity and ecosystem structure in the oceans.

Range-Wide Latitudinal and Elevational Temperature Gradients for the World's Terrestrial Birds: Implications under Global Climate Change

PubMed Central

La Sorte, Frank A.; Butchart, Stuart H. M.; Jetz, Walter; Böhning-Gaese, Katrin

2014-01-01

Species' geographical distributions are tracking latitudinal and elevational surface temperature gradients under global climate change. To evaluate the opportunities to track these gradients across space, we provide a first baseline assessment of the steepness of these gradients for the world's terrestrial birds. Within the breeding ranges of 9,014 bird species, we characterized the spatial gradients in temperature along latitude and elevation for all and a subset of bird species, respectively. We summarized these temperature gradients globally for threatened and non-threatened species and determined how their steepness varied based on species' geography (range size, shape, and orientation) and projected changes in temperature under climate change. Elevational temperature gradients were steepest for species in Africa, western North and South America, and central Asia and shallowest in Australasia, insular IndoMalaya, and the Neotropical lowlands. Latitudinal temperature gradients were steepest for extratropical species, especially in the Northern Hemisphere. Threatened species had shallower elevational gradients whereas latitudinal gradients differed little between threatened and non-threatened species. The strength of elevational gradients was positively correlated with projected changes in temperature. For latitudinal gradients, this relationship only held for extratropical species. The strength of latitudinal gradients was better predicted by species' geography, but primarily for extratropical species. Our findings suggest threatened species are associated with shallower elevational temperature gradients, whereas steep latitudinal gradients are most prevalent outside the tropics where fewer bird species occur year-round. Future modeling and mitigation efforts would benefit from the development of finer grain distributional data to ascertain how these gradients are structured within species' ranges, how and why these gradients vary among species, and the capacity of species to utilize these gradients under climate change. PMID:24852009

Speed and thickness of the magnetopause.

NASA Technical Reports Server (NTRS)

Kaufmann, R. L.; Konradi, A.

1973-01-01

We have used the finite gyroradius of protons with energies greater than 140 keV to determine the location of the magnetopause when the satellite is within the adjacent steep proton flux gradient. This steep gradient region is usually two to four 140-keV proton gyroradii, or about 1000 to 4000 km thick. The measurements described here were made within 45 deg of the earth-sun line on moderately disturbed days, when proton fluxes were unusually high. On these days, the magnetopause usually moves at a speed of less than 20 km/sec. The magnetopause velocity sometimes changes abruptly, while remaining below 20 km/sec. Very rapid (about 50 km/sec) radial motion appears to be associated with the propagation of single, isolated waves along the magnetopause. The thickness of the electric current sheet that produces the magnetic field rotation in the magnetopause is usually on the order of 10 times the gyroradius of a 1-keV proton, or about 1000 km.

Adaptive Traits Are Maintained on Steep Selective Gradients despite Gene Flow and Hybridization in the Intertidal Zone

PubMed Central

Canovas, Fernando; Ferreira Costa, Joana; Serrão, Ester A.; Pearson, Gareth A.

2011-01-01

Gene flow among hybridizing species with incomplete reproductive barriers blurs species boundaries, while selection under heterogeneous local ecological conditions or along strong gradients may counteract this tendency. Congeneric, externally-fertilizing fucoid brown algae occur as distinct morphotypes along intertidal exposure gradients despite gene flow. Combining analyses of genetic and phenotypic traits, we investigate the potential for physiological resilience to emersion stressors to act as an isolating mechanism in the face of gene flow. Along vertical exposure gradients in the intertidal zone of Northern Portugal and Northwest France, the mid-low shore species Fucus vesiculosus, the upper shore species Fucus spiralis, and an intermediate distinctive morphotype of F. spiralis var. platycarpus were morphologically characterized. Two diagnostic microsatellite loci recovered 3 genetic clusters consistent with prior morphological assignment. Phylogenetic analysis based on single nucleotide polymorphisms in 14 protein coding regions unambiguously resolved 3 clades; sympatric F. vesiculosus, F. spiralis, and the allopatric (in southern Iberia) population of F. spiralis var. platycarpus. In contrast, the sympatric F. spiralis var. platycarpus (from Northern Portugal) was distributed across the 3 clades, strongly suggesting hybridization/introgression with both other entities. Common garden experiments showed that physiological resilience following exposure to desiccation/heat stress differed significantly between the 3 sympatric genetic taxa; consistent with their respective vertical distribution on steep environmental clines in exposure time. Phylogenetic analyses indicate that F. spiralis var. platycarpus is a distinct entity in allopatry, but that extensive gene flow occurs with both higher and lower shore species in sympatry. Experimental results suggest that strong selection on physiological traits across steep intertidal exposure gradients acts to maintain the 3 distinct genetic and morphological taxa within their preferred vertical distribution ranges. On the strength of distributional, genetic, physiological and morphological differences, we propose elevation of F. spiralis var. platycarpus from variety to species level, as F. guiryi. PMID:21695117

Imaging the Buried Chicxulub Crater with Gravity Gradients and Cenotes

NASA Astrophysics Data System (ADS)

Hildebrand, A. R.; Pilkington, M.; Halpenny, J. F.; Ortiz-Aleman, C.; Chavez, R. E.; Urrutia-Fucugauchi, J.; Connors, M.; Graniel-Castro, E.; Camara-Zi, A.; Vasquez, J.

1995-09-01

Differing interpretations of the Bouguer gravity anomaly over the Chicxulub crater, Yucatan Peninsula, Mexico, have yielded diameter estimates of 170 to 320 km. Knowing the crater's size is necessary to quantify the lethal perturbations to the Cretaceous environment associated with its formation. The crater's size (and internal structure) is revealed by the horizontal gradient of the Bouguer gravity anomaly over the structure, and by mapping the karst features of the Yucatan region. To improve our resolution of the crater's gravity signature we collected additional gravity measurements primarily along radial profiles, but also to fill in previously unsurveyed areas. Horizontal gradient analysis of Bouguer gravity data objectively highlights the lateral density contrasts of the impact lithologies and suppresses regional anomalies which may obscure the gravity signature of the Chicxulub crater lithologies. This gradient technique yields a striking circular structure with at least 6 concentric gradient features between 25 and 85 km radius. These features are most distinct in the southwest probably because of denser sampling of the gravity field. Our detailed profiles detected an additional feature and steeper gradients (up to 5 mGal/km) than the original survey. We interpret the outer four gradient maxima to represent concentric faults in the crater's zone of slumping as is also revealed by seismic reflection data. The inner two probably represent the margin of the central uplift and the peak ring and or collapsed transient cavity. Radial gradients in the SW quadrant over the inferred ~40 km-diameter central uplift (4) may represent structural "puckering" as revealed at eroded terrestrial craters. Gradient features related to regional gravity highs and lows are visible outside the crater, but no concentric gradient features are apparent at distances > 90 km radius. The marginal gradient features may be modelled by slump faults as observed in large complex craters on the other terrestrial planets. A modeled fault of 1.5 km displacement (slightly slumped block exterior and impact breccia interior) reproduces the steepest gradient feature. This model is incompatible with models that place these gradient features inside the collapsed transient cavity. Locations of the karst features of the northern Yucatan region were digitized from 1:50,000 topographic maps, which show most but not all the water-filled sinkholes (locally known as cenotes). A prominent ring of cenotes is visible over the crater that is spatially correlated to the outer steep gravity gradient feature. The mapped cenotes constitute an unbiased sampling of the region's karst surface features of >50 m diameter. The gradient maximum and the cenote ring both meander with amplitudes of up to 2 km. The wiggles in the gradient feature and the cenote distribution probably correspond to the "scalloping" observed at the headwall of terraces in large complex craters. A second partial cenote ring exterior to the southwest side of the main ring corresponds to a less-prominent gravity gradient feature. No concentric structure is observable in the distribution of karst features at radii >90 km. The cenote ring is bounded by the outer peripheral steep gradient feature and must be related to it; the slump faults must have been reactivated sufficiently to create fracturing in the overlying and much younger sediment. Long term subsidence, as found at other terrestrial craters is a possible mechanism for the reactivation. Such long term subsidence may be caused by differential compaction or thermal relaxation. Elevations acquired during gravity surveys show that the cenote ring also corresponds to a topographic low along some of its length that probably reflects preferential erosion.

Combined solvent- and non-uniform temperature-programmed gradient liquid chromatography. I - A theoretical investigation.

PubMed

Gritti, Fabrice

2016-11-18

An new class of gradient liquid chromatography (GLC) is proposed and its performance is analyzed from a theoretical viewpoint. During the course of such gradients, both the solvent strength and the column temperature are simultaneously changed in time and space. The solvent and temperature gradients propagate along the chromatographic column at their own and independent linear velocity. This class of gradient is called combined solvent- and temperature-programmed gradient liquid chromatography (CST-GLC). The general expressions of the retention time, retention factor, and of the temporal peak width of the analytes at elution in CST-GLC are derived for linear solvent strength (LSS) retention models, modified van't Hoff retention behavior, linear and non-distorted solvent gradients, and for linear temperature gradients. In these conditions, the theory predicts that CST-GLC is equivalent to a unique and apparent dynamic solvent gradient. The apparent solvent gradient steepness is the sum of the solvent and temperature steepness. The apparent solvent linear velocity is the reciprocal of the steepness-averaged sum of the reciprocal of the actual solvent and temperature linear velocities. The advantage of CST-GLC over conventional GLC is demonstrated for the resolution of protein digests (peptide mapping) when applying smooth, retained, and linear acetonitrile gradients in combination with a linear temperature gradient (from 20°C to 90°C) using 300μm×150mm capillary columns packed with sub-2 μm particles. The benefit of CST-GLC is demonstrated when the temperature gradient propagates at the same velocity as the chromatographic speed. The experimental proof-of-concept for the realization of temperature ramps propagating at a finite and constant linear velocity is also briefly described. Copyright © 2016 Elsevier B.V. All rights reserved.

Deuterium charge exchange recombination spectroscopy from the top of the pedestal to the scrape off layer in H-mode plasmas

NASA Astrophysics Data System (ADS)

Haskey, S. R.; Grierson, B. A.; Stagner, L.; Burrell, K. H.; Chrystal, C.; Groebner, R. J.; Ashourvan, A.; Pablant, N. A.

2017-10-01

Recent completion of the thirty two channel main-ion (deuterium) charge exchange recombination spectroscopy (CER) diagnostic on DIII-D [J.L. Luxon, Nucl. Fusion 42 (2002) 614] enables detailed comparisons between impurity and main-ion temperature, density, and toroidal rotation. Sixteen sightlines cover the core of the plasma and another sixteen are densely packed towards the edge, providing high resolution measurements of the pedestal and steep gradient edge region of H-mode plasmas. The complexities of the Dα spectrum require fitting with a comprehensive model, as well as using iterative collisional radiative modeling to determine the underlying thermal deuterium ion properties. Large differences in the structure and magnitude of impurity (C6+) and main-ion (D+) toroidal rotation profiles are seen in the H-mode pedestal. Additionally the D+ temperature can be half the value of the C6+ temperature at the separatrix and shows more of a pedestal structure. Typically only the impurity properties are measured and the main-ion properties are either assumed to be the same, or inferred using neoclassical models, which require validation in the steep gradient region. These measured differences have implications for transport model validation, intrinsic rotation studies, pedestal stability, and the boundary conditions for scrape off layer and plasma material interactions studies.

Deuterium charge exchange recombination spectroscopy from the top of the pedestal to the scrape off layer in H-mode plasmas

DOE PAGES

Haskey, S. R.; Grierson, B. A.; Stagner, L.; ...

2017-10-25

Recent completion of the thirty two channel main-ion (deuterium) charge exchange recombination spectroscopy (CER) diagnostic on DIII-D enables detailed comparisons between impurity and main-ion temperature, density, and toroidal rotation. Sixteen sightlines cover the core of the plasma and another sixteen are densely packed towards the edge, providing high resolution measurements of the pedestal and steep gradient edge region of H-mode plasmas. The complexities of the D α spectrum require fitting with a comprehensive model, as well as using iterative collisional radiative modeling to determine the underlying thermal deuterium ion properties. Large differences in the structure and magnitude of impurity (Cmore » 6+) and main-ion (D +) toroidal rotation profiles are seen in the H-mode pedestal. Additionally the D + temperature can be half the value of the C 6+ temperature at the separatrix and shows more of a pedestal structure. Typically only the impurity properties are measured and the main-ion properties are either assumed to be the same, or inferred using neoclassical models, which require validation in the steep gradient region. Furthermore, these measured differences have implications for transport model validation, intrinsic rotation studies, pedestal stability, and the boundary conditions for scrape off layer and plasma material interactions studies.« less

Jupiter's evolution with primordial composition gradients

NASA Astrophysics Data System (ADS)

Vazan, Allona; Helled, Ravit; Guillot, Tristan

2018-02-01

Recent formation and structure models of Jupiter suggest that the planet can have composition gradients and not be fully convective (adiabatic). This possibility directly affects our understanding of Jupiter's bulk composition and origin. In this Letter we present Jupiter's evolution with a primordial structure consisting of a relatively steep heavy-element gradient of 40 M⊕. We show that for a primordial structure with composition gradients, most of the mixing occurs in the outer part of the gradient during the early evolution (several 107 yr), leading to an adiabatic outer envelope (60% of Jupiter's mass). We find that the composition gradient in the deep interior persists, suggesting that 40% of Jupiter's mass can be non-adiabatic with a higher temperature than the one derived from Jupiter's atmospheric properties. The region that can potentially develop layered convection in Jupiter today is estimated to be limited to 10% of the mass. Movies associated to Figs. 1-3 are available at http://https://www.aanda.org

Energy balance in the solar transition region. II - Effects of pressure and energy input on hydrostatic models

NASA Technical Reports Server (NTRS)

Fontenla, J. M.; Avrett, E. H.; Loeser, R.

1991-01-01

The radiation of energy by hydrogen lines and continua in hydrostatic energy-balance models of the transition region between the solar chromosphere and corona is studied using models which assume that mechanical or magnetic energy is dissipated in the hot corona and is then transported toward the chromosphere down the steep temperature gradient of the transition region. These models explain the average quiet sun and also the entire range of variability of the Ly-alpha lines. The relations between the downward energy flux, the pressure of the transition region, and the different hydrogen emission are described.

Monolithic stationary phases with a longitudinal gradient of porosity.

PubMed

Urban, Jiří; Hájek, Tomáš; Svec, Frantisek

2017-04-01

The duration of the hypercrosslinking reaction has been used to control the extent of small pores formation in polymer-based monolithic stationary phases. Segments of five columns hypercrosslinked for 30-360 min were coupled via zero-volume unions to prepare columns with segmented porosity gradients. The steepness of the porosity gradient affected column efficiency, mass transfer resistance, and separation of both small-molecule alkylbenzenes and high-molar-mass polystyrene standards. In addition, the segmented column with the steepest porosity gradient was prepared as a single column with a continuous porosity gradient. The steepness of porosity gradient in this type column was tuned. Compared to a completely hypercrosslinked column, the column with the shallower gradient produced comparable size-exclusion separation of polystyrene standards but allowed higher column permeability. The completely hypercrosslinked column and the column with porosity gradient were successfully coupled in online two-dimensional liquid chromatography of polymers. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Erosion and deposition on the eastern margin of the Bermuda Rise in the late Quaternary

NASA Astrophysics Data System (ADS)

McCave, I. N.; Hollister, C. D.; Laine, E. P.; Lonsdale, P. F.; Richardson, M. J.

1982-05-01

A near-bottom survey has been made on the Eastward Scarp (32°50'N, 57°30'W) of the Bermuda Rise, which rises 1150 m above the 5500-m deep Sohm Abyssal Plain in the western North Atlantic. The survey reveals evidence of erosion and deposition at present and in the late Quaternary by the deeper levels of the westward flowing Gulf Stream Return Flow. Four distinct regions of increasing bed gradient show increasing sediment smoothing and scour in the transition from plateau to abyssal plain. Bedforms observed are current crescents, crag and tail, triangular ripples, elongate mounds, transverse mud ripples, lineations, and furrows ranging from 10 to 1 m or less in depth, decreasing generally with bed gradient. Measured near-bottom current speeds are up to 20 cm s -1. Temperature structure on the lower, steep, slopes suggests that detachment of bottom mixed layers may occur there. Extensive net erosion appears to be confined to the lower steep slopes of the scarp. Reflection profiles (4 kHz) show that there has been erosion in areas thinly draped with recent sediments and in areas that show development of small scarps. The distribution of subsurface acoustic characteristics of the region corresponds broadly to the areas characterized by bed gradient and distinct sedimentation conditions. Subsurface hyperbolae, possibly caused by buried furrows, show furrow persistence through several tens of metres of deposition. Erosion occurs up to the top of the scarp during episodes of presumed stronger currents, which may correspond with intensified circulation during glacials.

Plasma response measurements of non-axisymmetric magnetic perturbations on DIII-D via soft x-ray imaging

DOE PAGES

Shafer, Morgan W.; Unterberg, Ezekial A.; Wingen, Andreas; ...

2014-12-29

Recent observations on DIII-D have advanced the understanding of plasma response to applied resonant magnetic perturbations (RMPs) in both H-mode and L-mode plasmas. Three distinct 3D features localized in minor radius are imaged via filtered soft x-ray emission: (i) the formation of lobes extending from the unperturbed separatrix in the X-point region at the plasma boundary, (ii) helical kink-like perturbations in the steep-gradient region inside the separatrix, and (iii) amplified islands in the core of a low-rotation L-mode plasma. In this study, these measurements are used to test and to validate plasma response models, which are crucial for providing predictivemore » capability of edge-localized mode control. In particular, vacuum and two-fluid resistive magnetohydrodynamic(MHD) responses are tested in the regions of these measurements. At the plasma boundary in H-mode discharges with n = 3 RMPs applied, measurements compare well to vacuum-field calculations that predict lobe structures. Yet in the steep-gradient region, measurements agree better with calculations from the linear resistive two-fluid MHD code, M3D-C1. Relative to the vacuum fields, the resistive two-fluid MHD calculations show a reduction in the pitch-resonant components of the normal magnetic field (screening), and amplification of non-resonant components associated with ideal kink modes. However, the calculations still over-predict the amplitude of the measuredperturbation by a factor of 4. In a slowly rotating L-mode plasma with n = 1 RMPs, core islands are observed amplified from vacuum predictions. Finally, these results indicate that while the vacuum approach describes measurements in the edge region well, it is important to include effects of extended MHD in the pedestal and deeper in the plasma core.« less

Rocket observations of electron density in the nighttime E region using Faraday rotation

NASA Technical Reports Server (NTRS)

Smith, L. G.; Gilchrist, B. E.

1984-01-01

A rocket radio propagation experiment is described in which the electron density profile of the nighttime E region is obtained with an accuracy of 100 per cu cm. The factors limiting the accuracy of the experiment are found to be related to atmospheric and receiver noise and to the use of a magnetometer to determine the spin rate of the rocket. The Fourier analysis used for the frequency measurement may also contribute error under conditions of steep electron density gradients. The accuracy being achieved appears to be adequate for present applications of the experiment.

SDSS IV MaNGA - metallicity and nitrogen abundance gradients in local galaxies

NASA Astrophysics Data System (ADS)

Belfiore, Francesco; Maiolino, Roberto; Tremonti, Christy; Sánchez, Sebastian F.; Bundy, Kevin; Bershady, Matthew; Westfall, Kyle; Lin, Lihwai; Drory, Niv; Boquien, Médéric; Thomas, Daniel; Brinkmann, Jonathan

2017-07-01

We study the gas phase metallicity (O/H) and nitrogen abundance gradients traced by star-forming regions in a representative sample of 550 nearby galaxies in the stellar mass range 109-1011.5 M⊙ with resolved spectroscopic data from the Sloan Digital Sky Survey IV Mapping Nearby Galaxies at Apache Point Observatory survey. Using strong-line ratio diagnostics (R23 and O3N2 for metallicity and N2O2 for N/O) and referencing to the effective (half-light) radius (Re), we find that the metallicity gradient steepens with stellar mass, lying roughly flat among galaxies with log (M⋆/M⊙) = 9.0 but exhibiting slopes as steep as -0.14 dex R_e^{-1} at log (M⋆/M⊙) = 10.5 (using R23, but equivalent results are obtained using O3N2). At higher masses, these slopes remain typical in the outer regions of our sample (R > 1.5Re), but a flattening is observed in the central regions (R < 1Re). In the outer regions (R > 2.0Re), we detect a mild flattening of the metallicity gradient in stacked profiles, although with low significance. The N/O ratio gradient provides complementary constraints on the average chemical enrichment history. Unlike the oxygen abundance, the average N/O profiles do not flatten out in the central regions of massive galaxies. The metallicity and N/O profiles both depart significantly from an exponential form, suggesting a disconnect between chemical enrichment and stellar mass surface density on local scales. In the context of inside-out growth of discs, our findings suggest that central regions of massive galaxies today have evolved to an equilibrium metallicity, while the nitrogen abundance continues to increase as a consequence of delayed secondary nucleosynthetic production.

Analysis of Particle Transport in DIII-D H-mode Plasma with a Generalized Pinch-Diffusion Model

NASA Astrophysics Data System (ADS)

Owen, L. W.; Stacey, W. M.; Groebner, R. J.; Callen, J. D.; Bonnin, X.

2009-11-01

Interpretative analyses of particle transport in the pedestal region of H-mode plasmas typically yield diffusion coefficients that are very small (<0.1 m^2/s) in the steep gradient region when a purely diffusive particle flux is fitted to the experimental density gradients. Previous evaluation of the particle and momentum balance equations using the experimental data indicated that the pedestal profiles are consistent with transport described by a pinch-diffusion particle flux relation [1]. This type of model is used to calculate the diffusion coefficient and pinch velocity in the core for an inter-ELM H-mode plasma in the DIII-D discharge 98889. Full-plasma SOPLS simulations using neutral beam particle and energy sources from ONETWO calculations and the model transport coefficients show good agreement with the measured density pedestal profile. 6pt [1] W.M. Stacey and R.J. Groebner, Phys. Plasmas 12, 042504 (2005).

Global gyrokinetic simulation of Tokamak edge pedestal instabilities.

PubMed

Wan, Weigang; Parker, Scott E; Chen, Yang; Yan, Zheng; Groebner, Richard J; Snyder, Philip B

2012-11-02

Global electromagnetic gyrokinetic simulations show the existence of near threshold conditions for both a high-n kinetic ballooning mode (KBM) and an intermediate-n kinetic version of peeling-ballooning mode (KPBM) in the edge pedestal of two DIII-D H-mode discharges. When the magnetic shear is reduced in a narrow region of steep pressure gradient, the KPBM is significantly stabilized, while the KBM is weakly destabilized and hence becomes the most-unstable mode. Collisions decrease the KBM's critical β and increase the growth rate.

Edge profile analysis of Joint European Torus (JET) Thomson scattering data: Quantifying the systematic error due to edge localised mode synchronisation.

PubMed

Leyland, M J; Beurskens, M N A; Flanagan, J C; Frassinetti, L; Gibson, K J; Kempenaars, M; Maslov, M; Scannell, R

2016-01-01

The Joint European Torus (JET) high resolution Thomson scattering (HRTS) system measures radial electron temperature and density profiles. One of the key capabilities of this diagnostic is measuring the steep pressure gradient, termed the pedestal, at the edge of JET plasmas. The pedestal is susceptible to limiting instabilities, such as Edge Localised Modes (ELMs), characterised by a periodic collapse of the steep gradient region. A common method to extract the pedestal width, gradient, and height, used on numerous machines, is by performing a modified hyperbolic tangent (mtanh) fit to overlaid profiles selected from the same region of the ELM cycle. This process of overlaying profiles, termed ELM synchronisation, maximises the number of data points defining the pedestal region for a given phase of the ELM cycle. When fitting to HRTS profiles, it is necessary to incorporate the diagnostic radial instrument function, particularly important when considering the pedestal width. A deconvolved fit is determined by a forward convolution method requiring knowledge of only the instrument function and profiles. The systematic error due to the deconvolution technique incorporated into the JET pedestal fitting tool has been documented by Frassinetti et al. [Rev. Sci. Instrum. 83, 013506 (2012)]. This paper seeks to understand and quantify the systematic error introduced to the pedestal width due to ELM synchronisation. Synthetic profiles, generated with error bars and point-to-point variation characteristic of real HRTS profiles, are used to evaluate the deviation from the underlying pedestal width. We find on JET that the ELM synchronisation systematic error is negligible in comparison to the statistical error when assuming ten overlaid profiles (typical for a pre-ELM fit to HRTS profiles). This confirms that fitting a mtanh to ELM synchronised profiles is a robust and practical technique for extracting the pedestal structure.

Morning Martian Atmospheric Temperature Gradients and Fluctuations Observed by Mars Pathfinder

NASA Technical Reports Server (NTRS)

Mihalov, John D.; Haberle, R. M.; Murphy, J. R.; Seiff, A.; Wilson, G. R.

1999-01-01

We have studied the most prominent atmospheric temperature fluctuations observed during Martian mornings by Mars Pathfinder and have concluded, based on comparisons with wind directions, that they appear to be a result of atmospheric heating associated with the Lander spacecraft. Also, we have examined the morning surface layer temperature lapse rates, which are found to decrease as autumn approaches at the Pathfinder location, and which have mean (and median) values as large as 7.3 K/m in the earlier portions of the Pathfinder landed mission. It is plausible that brief isolated periods with gradients twice as steep are associated with atmospheric heating adjacent to Lander air bag material. In addition, we have calculated the gradient with height of the structure function obtained with Mars Pathfinder, for Mars' atmospheric temperatures measured within about 1.3 m from the surface, assuming a power law dependence, and have found that these gradients superficially resemble those reported for the upper region of the terrestrial stable boundary layer.

Local patterns of biological N fixation and N-to-P limitations along steep atmospheric deposition gradients

NASA Astrophysics Data System (ADS)

Scott, Dalton; Bradley, Robert; Bellenger, Jean-Philippe; Kathrin, Rousk; Michael, Gundale; DeLuca, Tom

2017-04-01

A major challenge facing biogeochemists is being able to predict how environmental changes alter the functioning of forest ecosystems. In particular, atmospheric N deposition (AND) from fossil fuel combustion is fertilizing forest ecosystems worldwide at an unprecedented rate. While much attention has been paid to regional and continental-scale AND patterns, very little is known about local scale patterns resulting from human activities. For example, busy roads have recently been identified as hotspots for AND, with steep gradients occurring within 100-400 m margins along busy roadsides. It was previously found that such gradients along boreal forest roadsides correlated negatively with changes in biological N fixation (BNF) by moss dwelling cyanobacteria. Here, we present data from a recent experiment designed to answer specific questions regarding this phenomenon, namely: (1) Can AND lead to shifts from N to P limitation of BNF in mosses? (2) Can AND shift the stoichiometry of P and Mo (i.e. nitrogenase enzyme cofactor) limiting BNF in mosses? (3) Do roadside BNF patterns occur because of a down regulation in nitrogenase enzyme activity, or as the result of changes in moss biomass? (4) Do roadside AND and BNF patterns correlate predictably with the relative N-to-P limitation of trees? Preliminary results confirm that roadside BNF gradients are site specific, with moisture and light availability as major environmental controls. P-limitations of BNF were observed along roadside gradients on some sites, as were changes in spruce needle N and P concentrations. Decreases in BNF due to high AND may partly be due to changes in moss biomass. Collectively, our project provides important insights that improve our knowledge of site-specific stoichiometric gradients due to AND, which can be used to improve the precision of biogeochemical models required to predict ecosystem responses to global changes.

LETTER TO THE EDITOR: The quasi-coherent signature of enhanced Dα H-mode in Alcator C-Mod

NASA Astrophysics Data System (ADS)

Snipes, J. A.; La Bombard, B.; Greenwald, M.; Hutchinson, I. H.; Irby, J.; Lin, Y.; Mazurenko, A.; Porkolab, M.

2001-04-01

The steady-state H-mode regime found at moderate to high density in Alcator C-Mod, known as enhanced Dα (EDA) H-mode, appears to be maintained by a continuous quasi-coherent (QC) mode in the steep edge gradient region. Large amplitude density and magnetic fluctuations with typical frequencies of about 100 kHz are driven by the QC mode. These fluctuations are measured in the steep edge gradient region by inserting a fast-scanning probe containing two poloidally separated Langmuir probes and a poloidal field pick-up coil. As the probe approaches the plasma edge, clear magnetic fluctuations were measured within about 2 cm of the last-closed flux surface (LCFS). The mode amplitude falls off rapidly with distance from the plasma centre with an exponential decay length of kr≈1.5 cm-1, measured 10 cm above the outboard midplane. The root-mean-square amplitude of the fluctuation extrapolated to the LCFS was θ≈5 G. The density fluctuations, on the other hand, were visible on the Langmuir probe only when it was within a few millimetres of the LCFS. The potential and density fluctuations were sufficiently in phase to enhance particle transport at the QC mode frequency. These results show that the QC signature of the EDA H-mode is an electromagnetic mode that appears to be responsible for the enhanced particle transport in the plasma edge.

The assessment of environmentally sensitive forest road construction in Calabrian pine forest areas of Turkey.

PubMed

Tunay, Metin

2006-07-01

Forest road construction by bulldozers in Calabrian Pine (Pinus brutia Ten.) forests on mountainous terrain of Turkey causes considerable damage to the environment and the forest standing alongside the road. This situation obliges a study of environmentally sound road construction in Turkey. This study was carried out in 4 sample sites of Antalya Forest Directorate in steep (34-50% gradient) and very steep terrain (51-70% gradient) conditions with bulldozer and excavator machine and direct damages to forest during road construction was determined, including forest area losses and damages to downhill trees in mountainous areas. It was determined that in steep terrain when excavators were used, less forest area (22.16%) was destroyed compared to bulldozers and 26.54% less area in very steep terrain. The proportion of damage on trees where bulldozer worked was nearly twofold higher than excavator was used. The results of this research show that the environmentally sensitive techniques applied for the road construction projects are considerably superior to the traditional use of bulldozers on steep slopes. The environmentally sound forest road construction by use of excavator must be considered an appropriate and reliable solution for mountainous terrain where areas of sensitive forest ecosystems are to be opened up.

Spatial gradients in action potential duration created by regional magnetofection of hERG are a substrate for wavebreak and turbulent propagation in cardiomyocyte monolayers.

PubMed

Campbell, Katherine; Calvo, Conrado J; Mironov, Sergey; Herron, Todd; Berenfeld, Omer; Jalife, José

2012-12-15

Spatial dispersion of action potential duration (APD) is a substrate for the maintenance of cardiac fibrillation, but the mechanisms are poorly understood. We investigated the role played by spatial APD dispersion in fibrillatory dynamics. We used an in vitro model in which spatial gradients in the expression of ether-à-go-go-related (hERG) protein, and thus rapid delayed rectifying K(+) current (I(Kr)) density, served to generate APD dispersion, high-frequency rotor formation, wavebreak and fibrillatory conduction. A unique adenovirus-mediated magnetofection technique generated well-controlled gradients in hERG and green fluorescent protein (GFP) expression in neonatal rat ventricular myocyte monolayers. Computer simulations using a realistic neonatal rat ventricular myocyte monolayer model provided crucial insight into the underlying mechanisms. Regional hERG overexpression shortened APD and increased rotor incidence in the hERG overexpressing region. An APD profile at 75 percent repolarization with a 16.6 ± 0.72 ms gradient followed the spatial profile of hERG-GFP expression; conduction velocity was not altered. Rotors in the infected region whose maximal dominant frequency was 12.9 Hz resulted in wavebreak at the interface (border zone) between infected and non-infected regions; dominant frequency distribution was uniform when the maximal dominant frequency was <12.9 Hz or the rotors resided in the uninfected region. Regularity at the border zone was lowest when rotors resided in the infected region. In simulations, a fivefold regional increase in I(Kr) abbreviated the APD and hyperpolarized the resting potential. However, the steep APD gradient at the border zone proved to be the primary mechanism of wavebreak and fibrillatory conduction. This study provides insight at the molecular level into the mechanisms by which spatial APD dispersion contributes to wavebreak, rotor stabilization and fibrillatory conduction.

Spatial gradients in action potential duration created by regional magnetofection of hERG are a substrate for wavebreak and turbulent propagation in cardiomyocyte monolayers

PubMed Central

Campbell, Katherine; Calvo, Conrado J; Mironov, Sergey; Herron, Todd; Berenfeld, Omer; Jalife, José

2012-01-01

Spatial dispersion of action potential duration (APD) is a substrate for the maintenance of cardiac fibrillation, but the mechanisms are poorly understood. We investigated the role played by spatial APD dispersion in fibrillatory dynamics. We used an in vitro model in which spatial gradients in the expression of ether-à-go-go-related (hERG) protein, and thus rapid delayed rectifying K+ current (IKr) density, served to generate APD dispersion, high-frequency rotor formation, wavebreak and fibrillatory conduction. A unique adenovirus-mediated magnetofection technique generated well-controlled gradients in hERG and green fluorescent protein (GFP) expression in neonatal rat ventricular myocyte monolayers. Computer simulations using a realistic neonatal rat ventricular myocyte monolayer model provided crucial insight into the underlying mechanisms. Regional hERG overexpression shortened APD and increased rotor incidence in the hERG overexpressing region. An APD profile at 75 percent repolarization with a 16.6 ± 0.72 ms gradient followed the spatial profile of hERG-GFP expression; conduction velocity was not altered. Rotors in the infected region whose maximal dominant frequency was ≥12.9 Hz resulted in wavebreak at the interface (border zone) between infected and non-infected regions; dominant frequency distribution was uniform when the maximal dominant frequency was <12.9 Hz or the rotors resided in the uninfected region. Regularity at the border zone was lowest when rotors resided in the infected region. In simulations, a fivefold regional increase in IKr abbreviated the APD and hyperpolarized the resting potential. However, the steep APD gradient at the border zone proved to be the primary mechanism of wavebreak and fibrillatory conduction. This study provides insight at the molecular level into the mechanisms by which spatial APD dispersion contributes to wavebreak, rotor stabilization and fibrillatory conduction. PMID:23090949

The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation

PubMed Central

Teske, Andreas; de Beer, Dirk; McKay, Luke J.; Tivey, Margaret K.; Biddle, Jennifer F.; Hoer, Daniel; Lloyd, Karen G.; Lever, Mark A.; Røy, Hans; Albert, Daniel B.; Mendlovitz, Howard P.; MacGregor, Barbara J.

2016-01-01

The hydrothermal mats, mounds, and chimneys of the southern Guaymas Basin are the surface expression of complex subsurface hydrothermal circulation patterns. In this overview, we document the most frequently visited features of this hydrothermal area with photographs, temperature measurements, and selected geochemical data; many of these distinct habitats await characterization of their microbial communities and activities. Microprofiler deployments on microbial mats and hydrothermal sediments show their steep geochemical and thermal gradients at millimeter-scale vertical resolution. Mapping these hydrothermal features and sampling locations within the southern Guaymas Basin suggest linkages to underlying shallow sills and heat flow gradients. Recognizing the inherent spatial limitations of much current Guaymas Basin sampling calls for comprehensive surveys of the wider spreading region. PMID:26925032

SU-F-T-449: Dosimetric Comparison of Acuros XB, Adaptive Convolve in Intensity Modulated Radiotherapy for Head and Neck Cancer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Uehara, R; Tachibana, H

Purpose: There have been several publications focusing on dose calculation in lung for a new dose calculation algorithm of Acuros XB (AXB). AXB could contribute to dose calculation for high-density media for bone and dental prosthesis rather than in lung. We compared the dosimetric performance of AXB, Adaptive Convolve (AC) in head and neck IMRT plans. Methods: In a phantom study, the difference in depth profile between AXB and AC was evaluated using Kodak EDR2 film sandwiched with tough water phantoms. 6 MV x-ray using the TrueBeam was irradiated. In a patient study, 20 head and neck IMRT plans hadmore » been clinically approved in Pinnacle3 and were transferred to Eclipse. Dose distribution was recalculated using AXB in Eclipse while maintaining AC-calculated monitor units and MLC sequence planned in Pinnacle. Subsequently, both the dose-volumetric data obtained using the two different calculation algorithms were compared. Results: The results in the phantom evaluation for the shallow area ahead of the build-up region shows over-dose for AXB and under-dose for AC, respectively. In the patient plans, AXB shows more hot spots especially around the high-density media than AC in terms of PTV (Max difference: 4.0%) and OAR (Max. difference: 1.9%). Compared to AC, there were larger dose deviations in steep dose gradient region and higher skin-dose. Conclusion: In head and neck IMRT plans, AXB and AC show different dosimetric performance for the regions inside the target volume around high-density media, steep dose gradient regions and skin-surface. There are limitations in skin-dose and complex anatomic condition using even inhomogeneous anthropomorphic phantom Thus, there is the potential for an increase of hot-spot in AXB, and an underestimation of dose in substance boundaries and skin regions in AC.« less

Control of bootstrap current in the pedestal region of tokamaks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shaing, K. C.; Department of Engineering Physics, University of Wisconsin, Madison, Wisconsin 53796; Lai, A. L.

2013-12-15

The high confinement mode (H-mode) plasmas in the pedestal region of tokamaks are characterized by steep gradient of the radial electric field, and sonic poloidal U{sub p,m} flow that consists of poloidal components of the E×B flow and the plasma flow velocity that is parallel to the magnetic field B. Here, E is the electric field. The bootstrap current that is important for the equilibrium, and stability of the pedestal of H-mode plasmas is shown to have an expression different from that in the conventional theory. In the limit where ‖U{sub p,m}‖≫ 1, the bootstrap current is driven by themore » electron temperature gradient and inductive electric field fundamentally different from that in the conventional theory. The bootstrap current in the pedestal region can be controlled through manipulating U{sub p,m} and the gradient of the radial electric. This, in turn, can control plasma stability such as edge-localized modes. Quantitative evaluations of various coefficients are shown to illustrate that the bootstrap current remains finite when ‖U{sub p,m}‖ approaches infinite and to provide indications how to control the bootstrap current. Approximate analytic expressions for viscous coefficients that join results in the banana and plateau-Pfirsch-Schluter regimes are presented to facilitate bootstrap and neoclassical transport simulations in the pedestal region.« less

Adaptive microfluidic gradient generator for quantitative chemotaxis experiments.

PubMed

Anielski, Alexander; Pfannes, Eva K B; Beta, Carsten

2017-03-01

Chemotactic motion in a chemical gradient is an essential cellular function that controls many processes in the living world. For a better understanding and more detailed modelling of the underlying mechanisms of chemotaxis, quantitative investigations in controlled environments are needed. We developed a setup that allows us to separately address the dependencies of the chemotactic motion on the average background concentration and on the gradient steepness of the chemoattractant. In particular, both the background concentration and the gradient steepness can be kept constant at the position of the cell while it moves along in the gradient direction. This is achieved by generating a well-defined chemoattractant gradient using flow photolysis. In this approach, the chemoattractant is released by a light-induced reaction from a caged precursor in a microfluidic flow chamber upstream of the cell. The flow photolysis approach is combined with an automated real-time cell tracker that determines changes in the cell position and triggers movement of the microscope stage such that the cell motion is compensated and the cell remains at the same position in the gradient profile. The gradient profile can be either determined experimentally using a caged fluorescent dye or may be alternatively determined by numerical solutions of the corresponding physical model. To demonstrate the function of this adaptive microfluidic gradient generator, we compare the chemotactic motion of Dictyostelium discoideum cells in a static gradient and in a gradient that adapts to the position of the moving cell.

Topographic and ecological controls on root reinforcement

Treesearch

T.C. Hales; C.R. Ford; T. Hwang; J.M. Vose; L.E. Band

2009-01-01

Shallow landslides are a significant hazard in steep, soil-mantled landscapes. During intense rainfall events, the distribution of shallow landslides is controlled by variations in landscape gradient, the frictional and cohesive properties of soil and roots, and the subsurface hydrologic response. While gradients can be estimated from digital elevation models,...

Topographic and ecologic controls on root reinforcement

Treesearch

T.C. Hales; C.R. Ford; T. Hwang; J.M. Vose; L.E. Band

2009-01-01

Shallow landslides are a significant hazard in steep, soil-mantled landscapes. During intense rainfall events, the distribution of shallow landslides is controlled by variations in landscape gradient, the frictional and cohesive properties of soil and roots, and the subsurface hydrologic response. While gradients can be estimated from digital elevation models,...

Centimeter-scale characterization of biogeochemical gradients at a wetland-aquifer interface using capillary electrophoresis

USGS Publications Warehouse

Baez-Cazull, S.; McGuire, J.T.; Cozzarelli, I.M.; Raymond, A.; Welsh, L.

2007-01-01

Steep biogeochemical gradients were measured at mixing interfaces in a wetland-aquifer system impacted by landfill leachate in Norman, Oklahoma. The system lies within a reworked alluvial plain and is characterized by layered low hydraulic conductivity wetland sediments interbedded with sandy aquifer material. Using cm-scale passive diffusion samplers, "peepers", water samples were collected in a depth profile to span interfaces between surface water and a sequence of deeper sedimentary layers. Geochemical indicators including electron acceptors, low-molecular-weight organic acids, base cations, and NH4+ were analyzed by capillary electrophoresis (CE) and field techniques to maximize the small sample volumes available from the centimeter-scale peepers. Steep concentration gradients of biogeochemical indicators were observed at various interfaces including those created at sedimentary boundaries and boundaries created by heterogeneities in organic C and available electron acceptors. At the sediment-water interface, chemical profiles with depth suggest that SO42 - and Fe reduction dominate driven by inputs of organic C from the wetland and availability of electron acceptors. Deeper in the sediments (not associated with a lithologic boundary), a steep gradient of organic acids (acetate maximum 8.8 mM) and NH4+ (maximum 36 mM) is observed due to a localized source of organic matter coupled with the lack of electron acceptor inputs. These findings highlight the importance of quantifying the redox reactions occurring in small interface zones and assessing their role on biogeochemical cycling at the system scale. ?? 2007 Elsevier Ltd. All rights reserved.

Fault-dominated deformation in an ice dam during annual filling and drainage of a marginal lake

USGS Publications Warehouse

Walder, J.S.; Trabant, D.C.; Cunico, M.; Anderson, S.P.; Anderson, R. Scott; Fountain, A.G.; Malm, A.

2005-01-01

Ice-dammed Hidden Creek Lake, Alaska, USA, outbursts annually in about 2-3 days. As the lake fills, a wedge of water penetrates beneath the glacier, and the surface of this 'ice dam' rises; the surface then falls as the lake drains. Detailed optical surveying of the glacier near the lake allows characterization of ice-dam deformation. Surface uplift rate is close to the rate of lake-level rise within about 400 m of the lake, then decreases by 90% over about 100 m. Such a steep gradient in uplift rate cannot be explained in terms of ice-dam flexure. Moreover, survey targets spanning the zone of steep uplift gradient move relative to one another in a nearly reversible fashion as the lake fills and drains. Evidently, the zone of steep uplift gradient is a fault zone, with the faults penetrating the entire thickness of the ice dam. Fault motion is in a reverse sense as the lake fills, but in a normal sense as the lake drains. As the overall fault pattern is the same from year to year, even though ice is lost by calving, the faults must be regularly regenerated, probably by linkage of surface and bottom crevasses as ice is advected toward the lake basin.

Landslides triggered by Hurricane Mitch in Guatemala -- inventory and discussion

USGS Publications Warehouse

Bucknam, Robert C.; Coe, Jeffrey A.; Chavarria, Manuel Mota; Godt, Jonathan W.; Tarr, Arthur C.; Bradley, Lee-Ann; Rafferty, Sharon A.; Hancock, Dean; Dart, Richard L.; Johnson, Margo L.

2001-01-01

The torrential rains that accompanied Hurricane Mitch in October and November of 1998 triggered thousands of landslides in the moderate to steep terrain bordering the Motagua and Polochic Rivers in eastern Guatemala. Using aerial photographs taken between January and March 2000 we mapped all visible landslides larger than about 15 m in minimum dimension in a study area of 10,000 km2 encompassing twenty 1:50,000-scale topographic map quadrangles. Rainfall from Hurricane Mitch was exceptional because it was geographically widespread, prolonged over a period of about a week, moderate to heavy in intensity, and occurred at the end of the rainy season when the ground already had a high moisture content. As documented in this report, this type of rainfall, on saturated or nearly saturated ground, has the capability to trigger both shallow and deep-seated landslides over a large area. We mapped about 11,500 landslides in the study area. The mapped landslides were of two general types: relatively small, translational and rotational landslides that commonly mobilized into debris flows and covered less than several hectares in area (not including flow paths), and large, commonly translational, landslides that sometimes generated debris flows and covered between 15 ha and 25 ha (not including flow paths). The main concentrations of landslides are on moderate-to-steep hillslopes underlain by diverse geologic units. For the purpose of describing the mapped landslides, we divided the study area into five distinct regions based on differing geologic and geomorphic characteristics. These regions include the upper Polochic valley and surrounding highlands, the central Sierra de las Minas, the hills surrounding La Union and Zacapa, the eastern Sierra de las Minas, and the border region with Honduras. All of these areas received between 200 mm and 600 mm of rain over a 13-day period between October 25 and November 6. The highest rainfall amounts (400 mm to 600 mm) occurred in the Upper Polochic valley and surrounding highlands and in the central Sierra de las Minas. The lower rainfall amounts (200 mm to 400 mm) occurred in the hills surrounding La Union, the eastern Sierra de las Minas, and in the border region with Honduras. In general, the rainfall received in these areas is roughly equivalent to the average precipitation received in a 1-year period. We used 10-m digital elevation models (DEMs) generated from contours on two quadrangles in the central Sierra de las Minas to create a map showing areas that were susceptible to landslides during Hurricane Mitch. To create the Hurricane Mitch susceptibility map, we developed a susceptibility threshold equation based on elevation and gradient. The analysis indicates that, at least on two quadrangles, gradients less than 9? were not susceptible to landslides during Hurricane Mitch. The slope of the line defined by the threshold equation indicates that less rainfall was required to initiate landslides on steep gradients than on shallow gradients. Ninety percent of the mapped landslides that were triggered by Hurricane Mitch are within the susceptible zone shown on the map. Eightysix percent of landslides that were mapped as predating Hurricane Mitch, and all landslides mapped as postdating Hurricane Mitch, are within the susceptible zone. We used LAHARZ software to model the potential downstream area affected by debris if a large landslide dam on the Rio La Lima were to fail. The model shows that the area affected would be similar to the area that was affected by a debris flow that mobilized from a large landslide along the Rio La Lima during Hurricane Mitch. The characteristics of rainfall-triggered landslides described in this report can be used as a partial guide to future landslide activity triggered by rainstorms. On the basis of existing data, hazardous areas include: moderate to steep hillslopes and

Experimental generation and computational modeling of intracellular pH gradients in cardiac myocytes.

PubMed

Swietach, Pawel; Leem, Chae-Hun; Spitzer, Kenneth W; Vaughan-Jones, Richard D

2005-04-01

It is often assumed that pH(i) is spatially uniform within cells. A double-barreled microperfusion system was used to apply solutions of weak acid (acetic acid, CO(2)) or base (ammonia) to localized regions of an isolated ventricular myocyte (guinea pig). A stable, longitudinal pH(i) gradient (up to 1 pH(i) unit) was observed (using confocal imaging of SNARF-1 fluorescence). Changing the fractional exposure of the cell to weak acid/base altered the gradient, as did changing the concentration and type of weak acid/base applied. A diffusion-reaction computational model accurately simulated this behavior of pH(i). The model assumes that H(i)(+) movement occurs via diffusive shuttling on mobile buffers, with little free H(+) diffusion. The average diffusion constant for mobile buffer was estimated as 33 x 10(-7) cm(2)/s, consistent with an apparent H(i)(+) diffusion coefficient, D(H)(app), of 14.4 x 10(-7) cm(2)/s (at pH(i) 7.07), a value two orders of magnitude lower than for H(+) ions in water but similar to that estimated recently from local acid injection via a cell-attached glass micropipette. We conclude that, because H(i)(+) mobility is so low, an extracellular concentration gradient of permeant weak acid readily induces pH(i) nonuniformity. Similar concentration gradients for weak acid (e.g., CO(2)) occur across border zones during regional myocardial ischemia, raising the possibility of steep pH(i) gradients within the heart under some pathophysiological conditions.

Vegetation-environment relationships in zero-order basins in coastal Oregon.

Treesearch

Chris D. Sheridan; Thomas A. Spies

2005-01-01

Zero-order basins, where hillslope topography converges to form drainages, are common in steep, forested landscapes but we know little about their ecological structure. We used indirect gradient analysis to characterize gradients in plant species composition and cluster analysis to characterize groups of plant species associated with specific geomorphic areas. We...

Phylogenetic diversity of macromycetes and woody plants along an elevational gradient in Eastern Mexico

Treesearch

Marko Gomez-Hernandez; Guadalupe Williams-Linera; D. Jean Lodge; Roger Guevara; Eduardo Ruiz-Sanchez; Etelvina Gandara

2016-01-01

Phylogenetic information provides insight into the ecological and evolutionary processes that organize species assemblages. We compared patterns of phylogenetic diversity among macromycete and woody plant communities along a steep elevational gradient in eastern Mexico to better understand the evolutionary processes that structure their communities. Macrofungi and...

Spatial and temporal dynamics of disturbance interactions along an ecological gradient

Treesearch

Christopher D. O' Connor

2013-01-01

Interactions among site conditions, disturbance events, and climate determine the patterns of forest species recruitment and mortality across landscapes. Forests of the American Southwest have undergone significant changes over a century of altered disturbance regimes, human land uses, and changing environmental conditions. Along steep vertical gradients such as those...

Nonlinear MHD simulation of current drive by multi-pulsed coaxial helicity injection in spherical torus

NASA Astrophysics Data System (ADS)

Kanki, Takashi; Nagata, Masayoshi; Kagei, Yasuhiro

2011-10-01

The dynamics of structures of magnetic field, current density, and plasma flow generated during multi-pulsed coaxial helicity injection in spherical torus is investigated by 3-D nonlinear MHD simulations. During the driven phase, the flux and current amplifications occur due to the merging and magnetic reconnection between the preexisting plasma in the confinement region and the ejected plasma from the gun region involving the n = 1 helical kink distortion of the central open flux column (COFC). Interestingly, the diamagnetic poloidal flow which tends toward the gun region is then observed due to the steep pressure gradients of the COFC generated by ohmic heating through an injection current winding around the inboard field lines, resulting in the formation of the strong poloidal flow shear at the interface between the COFC and the core region. This result is consistent with the flow shear observed in the HIST. During the decay phase, the configuration approaches the axisymmetric MHD equilibrium state without flow because of the dissipation of magnetic fluctuation energy to increase the closed flux surfaces, suggesting the generation of ordered magnetic field structure. The parallel current density λ concentrated in the COFC then diffuses to the core region so as to reduce the gradient in λ, relaxing in the direction of the Taylor state.

Enviromental Effects on Internal Color Gradients of Early-Type Galaxies

NASA Astrophysics Data System (ADS)

La Barbera, F.; de Carvalho, R. R.; Gal, R. R.; Busarello, G.; Haines, C. P.; Mercurio, A.; Merluzzi, P.; Capaccioli, M.; Djorgovski, S. G.

2007-05-01

One of the most debated issues of observational and theoretical cosmology is that of how the environment affects the formation and evolution of galaxies. To gain new insight into this subject, we have derived surface photometry for a sample of 3,000 early-type galaxies belonging to 163 clusters with different richness, spanning a redshift range of 0.05 to 0.25. This large data-set is used to analyze how the color distribution inside galaxies depends on several parameters, such as cluster richness, local galaxy density, galaxy luminosity and redshift. We find that the internal color profile of galaxies strongly depends on the environment where galaxies reside. Galaxies in poor and rich clusters are found to follow two distinct trends in the color gradient vs. redshift diagram, with color gradients beeing less steep in rich rather than in poor clusters. No dependence of color gradients on galaxy luminosity is detected both for poor and rich clusters. We find that color gradients strongly depend on local galaxy density, with more shallow gradients in high density regions. Interestingly, this result holds only for low richness clusters, with color gradients of galaxies in rich clusters showing no dependence on local galaxy density. Our results support a reasonable picture whereby young early-type galaxies form in a dissipative collapse process, and then undergo increased (either major or minor) merging activity in richer rather than in poor clusters.

Mass Movement Susceptibility Mapping Using Satellite Optical Imagery Compared With INSAR Monitoring: Zigui County, Three Gorges Region, China

NASA Astrophysics Data System (ADS)

Kincal, Cem; Singleton, Andrew; Liu, Peng; Li, Zhenhong; Drummond, Jane; Hoey, Trevor; Muller, Jan-Peter; Qu, Wei; Zeng, Qiming; Zhang, Jingfa; Du, Peijun

2010-10-01

Mass movements on steep slopes are a major hazard to communities and infrastructure in the Three Gorges region, China. Developing susceptibility maps of mass movements is therefore very important in both current and future land use planning. This study employed satellite optical imagery and an ASTER GDEM (15 m) to derive various parameters (namely geology; slope gradient; proximity to drainage networks and proximity to lineaments) in order to create a GIS-based map of mass movement susceptibility. This map was then evaluated using highly accurate deformation signals processed using the Persistent Scatterer (PS) InSAR technique. Areas of high susceptibility correspond well to points of high subsidence, which provides a strong support of our susceptibility map.

Verification of TEMPEST with neoclassical transport theory

NASA Astrophysics Data System (ADS)

Xiong, Z.; Cohen, B. I.; Cohen, R. H.; Dorr, M.; Hittinger, J.; Kerbel, G.; Nevins, W. M.; Rognlien, T.; Umansky, M.; Xu, X.

2006-10-01

TEMPEST is an edge gyro-kinetic continuum code developed to study boundary plasma transport over the region extending from the H-mode pedestal across the separatrix to the divertor plates. For benchmark purposes, we present results from the 4D (2r,2v) TEMPEST for both steady-state transport and time-dependent Geodesic Acoustic Modes (GAMs). We focus on an annular region inside the separatrix of a circular cross-section tokamak where analytical and numerical results are available. The parallel flow velocity and radial particle flux are obtained for different collisional regimes and compared with previous neoclassical results. The effect of radial electric field and the transition to steep edge gradients is emphasized. The dynamical response of GAMs is also shown and compared to recent theory.

The Trails of Superluminal Jet Components in 3C 111

NASA Technical Reports Server (NTRS)

Kadler, M.; Ros, E.; Perucho, M.; Kovalev, Y. Y.; Homan, D. C.; Agudo, I.; Kellermann, K. I.; Aller, M. F.; Aller, H. D.; Lister, M. L.;

Effects of density gradient caused by multi-pulsing CHI on two-fluid flowing equilibria of spherical torus plasmas

NASA Astrophysics Data System (ADS)

Kanki, T.; Nagata, M.

2014-10-01

Two-fluid dynamo relaxation is examined to understand sustainment mechanism of spherical torus (ST) plasmas by multi-pulsing CHI (M-CHI) in the HIST device. The steeper density gradient between the central open flux column (OFC) and closed flux regions by applying the second CHI pulse is observed to cause not only the E × B drift but also the ion diamagnetic drift, leading the two-fluid dynamo. The purpose of this study is to investigate the effects of the steep change in the density gradient on the ST equilibria by using the two-fluid equilibrium calculations. The toroidal magnetic field becomes from a diamagnetic to a paramagnetic profile in the closed flux region while it remains a diamagnetic profile in the OFC region. The toroidal ion flow velocity is increased from negative to positive values in the closed flux region. Here, the negative ion flow velocity is the opposite direction to the toroidal current. The poloidal ion flow velocity between the OFC and closed flux regions is increased, because the ion diamagnetic drift velocity is changed in the same direction as the E × B drift velocity through the steeper ion pressure gradient. As a result, the strong shear flow and the paramagnetic toroidal field are generated in the closed flux region. Here, the ion flow velocity is the same direction as the poloidal current. The radial electric field shear between the OFC and closed flux regions is enhanced due to the strong dependence on the magnetic force through the interaction of toroidal ion flow velocity and axial magnetic field. The two-fluid effect is significant there due to the ion diamagnetic effect.

IUE and Einstein survey of late-type giant and supergiant stars and the dividing line

NASA Technical Reports Server (NTRS)

Haisch, Bernhard M.; Bookbinder, Jay A.; Maggio, A.; Vaiana, G. S.; Bennett, Jeffrey O.

1990-01-01

Results are presented on an IUE UV survey of 255 late-type G, K, and M stars, complementing the Maggio et al. (1990) Einstein X-ray survey of 380 late-type stars. The large data sample of X-ray and UV detections make it possible to examine the activity relationship between the X-ray and the UV emissions. The results confirm previous finding of a trend involving a steeply-dropping upper envelope of the transition region line fluxes, f(line)/f(V), as the dividing line is approached. This suggests that a sharp decrease in maximum activity accompanies the advancing spectral type, with the dividing line corresponding to this steep gradient region. The results confirm the rotation-activity connection for stars in this region of the H-R diagram.

Effects of climatic gradients on genetic differentiation of Caragana on the Ordos Plateau, China

Treesearch

Jiuyan Yang; Samuel A. Cushman; Jie Yang; Mingbo Yang; Tiejun Bao

2013-01-01

The genus Caragana (Fabr.) in the Ordos Plateau of Inner Mongolia, China, provides a strong opportunity to investigate patterns of genetic differentiation along steep climatic gradients, and to identify the environmental factors most likely to be responsible for driving the radiation. This study used a factorial, multi-model approach to evaluate alternative hypotheses...

Younger Dryas glaciers in the High Atlas, Morocco

NASA Astrophysics Data System (ADS)

Hughes, Philip; Fink, David

2016-04-01

Twelve cirque glaciers formed during the Younger Dryas on the mountains of Aksoual (3912 m a.s.l.) and Adrar el Hajj (3129 m a.s.l.) in the Marrakesh High Atlas. Moraines in two separate cirques on these mountains have been dated using 10Be and 36Cl exposure dating. In both cirques the age scatter is relatively small (13.8-10.1 ka) and all ages overlap within error with the Younger Dryas (12.9-11.7 ka). The glaciers were small and covered <2 km2 and formed on north-facing slopes. However, the altitudinal range of the glaciers was very large, with equilibrium line altitudes (ELAs) ranging from 2470 and 3560 m. This large range is attributed to local topoclimatic factors with the lowest glacier (confirmed as Younger Dryas in age by 3 exposure ages) occupying a very steep cirque floor where a combination of steep glacier gradient and a large potential avalanche catchment enabled its low-lying position. This indicates that caution should be taken when using single glacier sites for reconstructing regional palaeoclimate, especially those formed in steep catchments that have strong topoclimatic controls. The average ELA of the twelve Younger Dryas glaciers was c. 3109 m a.s.l. (St Dev = 325 m) and this represents an ELA depression of > 1000 m from the modern theoretical regional ELA. Under precipitation values similar to today this would require a mean annual temperature depression of 9°C. Moreover, the glacier-climate modelling indicates that it is very unlikely that climate was drier than today during the Younger Dryas in the Marrakesh High Atlas.

Global collocation methods for approximation and the solution of partial differential equations

NASA Technical Reports Server (NTRS)

Solomonoff, A.; Turkel, E.

1986-01-01

Polynomial interpolation methods are applied both to the approximation of functions and to the numerical solutions of hyperbolic and elliptic partial differential equations. The derivative matrix for a general sequence of the collocation points is constructed. The approximate derivative is then found by a matrix times vector multiply. The effects of several factors on the performance of these methods including the effect of different collocation points are then explored. The resolution of the schemes for both smooth functions and functions with steep gradients or discontinuities in some derivative are also studied. The accuracy when the gradients occur both near the center of the region and in the vicinity of the boundary is investigated. The importance of the aliasing limit on the resolution of the approximation is investigated in detail. Also examined is the effect of boundary treatment on the stability and accuracy of the scheme.

Direct measurements and comparisons between deuterium and impurity rotation and density profiles in the H-mode steep gradient region on DIII-D

NASA Astrophysics Data System (ADS)

Haskey, S. R.; Grierson, B. A.; Chrystal, C.; Stagner, L.; Burrell, K.; Groebner, R. J.; Kaplan, D. H.; Nazikian, R.

2016-10-01

The recently commissioned edge deuterium charge exchange recombination (CER) spectroscopy diagnostic on DIII-D is providing direct measurements of the deuterium rotation, temperature, and density in H-mode pedestals. The deuterium temperature and temperature scale length can be 50 % lower than the carbon measurement in the gradient region of the pedestal, indicating that the ion pedestal pressure can deviate significantly from that inferred from carbon CER. In addition, deuterium exhibits a larger toroidal rotation in the co-Ip direction near the separatrix compared with the carbon. These differences are qualitatively consistent with theory-based models that identify thermal ion orbit loss across the separatrix as a source of intrinsic angular momentum. The first direct measurements of the deuterium density pedestal profile show an inward shift of the impurity pedestal compared with the main ions, validating neoclassical predictions from the XGC0 code. Work supported by the U.S. DOE under DE-FC02-04ER54698 and DE-AC02-09CH11466.

Study of Chemotaxis and Cell–Cell Interactions in Cancer with Microfluidic Devices

PubMed Central

Sai, Jiqing; Rogers, Matthew; Hockemeyer, Kathryn; Wikswo, John P.; Richmond, Ann

2017-01-01

Microfluidic devices have very broad applications in biological assays from simple chemotaxis assays to much more complicated 3D bioreactors. In this chapter, we describe the design and methods for performing chemotaxis assays using simple microfluidic chemotaxis chambers. With these devices, using real-time video microscopy we can examine the chemotactic responses of neutrophil-like cells under conditions of varying gradient steepness or flow rate and then utilize software programs to calculate the speed and angles of cell migration as gradient steepness and flow are varied. Considering the shearing force generated on the cells by the constant flow that is required to produce and maintain a stable gradient, the trajectories of the cell migration will reflect the net result of both shear force generated by flow and the chemotactic force resulting from the chemokine gradient. Moreover, the effects of mutations in chemokine receptors or the presence of inhibitors of intracellular signals required for gradient sensing can be evaluated in real time. We also describe a method to monitor intracellular signals required for cells to alter cell polarity in response to an abrupt switch in gradient direction. Lastly, we demonstrate an in vitro method for studying the interactions of human cancer cells with human endothelial cells, fibroblasts, and leukocytes, as well as environmental chemokines and cytokines, using 3D microbioreactors that mimic the in vivo microenvironment. PMID:26921940

Extensive phenotypic plasticity of a Red Sea coral over a strong latitudinal temperature gradient suggests limited acclimatization potential to warming

PubMed Central

Sawall, Yvonne; Al-Sofyani, Abdulmoshin; Hohn, Sönke; Banguera-Hinestroza, Eulalia; Voolstra, Christian R.; Wahl, Martin

2015-01-01

Global warming was reported to cause growth reductions in tropical shallow water corals in both, cooler and warmer, regions of the coral species range. This suggests regional adaptation with less heat-tolerant populations in cooler and more thermo-tolerant populations in warmer regions. Here, we investigated seasonal changes in the in situ metabolic performance of the widely distributed hermatypic coral Pocillopora verrucosa along 12° latitudes featuring a steep temperature gradient between the northern (28.5°N, 21–27°C) and southern (16.5°N, 28–33°C) reaches of the Red Sea. Surprisingly, we found little indication for regional adaptation, but strong indications for high phenotypic plasticity: Calcification rates in two seasons (winter, summer) were found to be highest at 28–29°C throughout all populations independent of their geographic location. Mucus release increased with temperature and nutrient supply, both being highest in the south. Genetic characterization of the coral host revealed low inter-regional variation and differences in the Symbiodinium clade composition only at the most northern and most southern region. This suggests variable acclimatization potential to ocean warming of coral populations across the Red Sea: high acclimatization potential in northern populations, but limited ability to cope with ocean warming in southern populations already existing at the upper thermal margin for corals. PMID:25754672

Extensive phenotypic plasticity of a Red Sea coral over a strong latitudinal temperature gradient suggests limited acclimatization potential to warming.

PubMed

Sawall, Yvonne; Al-Sofyani, Abdulmoshin; Hohn, Sönke; Banguera-Hinestroza, Eulalia; Voolstra, Christian R; Wahl, Martin

2015-03-10

Global warming was reported to cause growth reductions in tropical shallow water corals in both, cooler and warmer, regions of the coral species range. This suggests regional adaptation with less heat-tolerant populations in cooler and more thermo-tolerant populations in warmer regions. Here, we investigated seasonal changes in the in situ metabolic performance of the widely distributed hermatypic coral Pocillopora verrucosa along 12° latitudes featuring a steep temperature gradient between the northern (28.5°N, 21-27°C) and southern (16.5°N, 28-33°C) reaches of the Red Sea. Surprisingly, we found little indication for regional adaptation, but strong indications for high phenotypic plasticity: Calcification rates in two seasons (winter, summer) were found to be highest at 28-29°C throughout all populations independent of their geographic location. Mucus release increased with temperature and nutrient supply, both being highest in the south. Genetic characterization of the coral host revealed low inter-regional variation and differences in the Symbiodinium clade composition only at the most northern and most southern region. This suggests variable acclimatization potential to ocean warming of coral populations across the Red Sea: high acclimatization potential in northern populations, but limited ability to cope with ocean warming in southern populations already existing at the upper thermal margin for corals.

Adaptive dynamics on an environmental gradient that changes over a geological time-scale.

PubMed

Fortelius, Mikael; Geritz, Stefan; Gyllenberg, Mats; Toivonen, Jaakko

2015-07-07

The standard adaptive dynamics framework assumes two timescales, i.e. fast population dynamics and slow evolutionary dynamics. We further assume a third timescale, which is even slower than the evolutionary timescale. We call this the geological timescale and we assume that slow climatic change occurs within this timescale. We study the evolution of our model population over this very slow geological timescale with bifurcation plots of the standard adaptive dynamics framework. The bifurcation parameter being varied describes the abiotic environment that changes over the geological timescale. We construct evolutionary trees over the geological timescale and observe both gradual phenotypic evolution and punctuated branching events. We concur with the established notion that branching of a monomorphic population on an environmental gradient only happens when the gradient is not too shallow and not too steep. However, we show that evolution within the habitat can produce polymorphic populations that inhabit steep gradients. What is necessary is that the environmental gradient at some point in time is such that the initial branching of the monomorphic population can occur. We also find that phenotypes adapted to environments in the middle of the existing environmental range are more likely to branch than phenotypes adapted to extreme environments. Copyright © 2015 Elsevier Ltd. All rights reserved.

Image processing for IMRT QA dosimetry.

PubMed

Zaini, Mehran R; Forest, Gary J; Loshek, David D

2005-01-01

We have automated the determination of the placement location of the dosimetry ion chamber within intensity-modulated radiotherapy (IMRT) fields, as part of streamlining the entire IMRT quality assurance process. This paper describes the mathematical image-processing techniques to arrive at the appropriate measurement locations within the planar dose maps of the IMRT fields. A specific spot within the found region is identified based on its flatness, radiation magnitude, location, area, and the avoidance of the interleaf spaces. The techniques used include applying a Laplacian, dilation, erosion, region identification, and measurement point selection based on three parameters: the size of the erosion operator, the gradient, and the importance of the area of a region versus its magnitude. These three parameters are adjustable by the user. However, the first one requires tweaking in extremely rare occasions, the gradient requires rare adjustments, and the last parameter needs occasional fine-tuning. This algorithm has been tested in over 50 cases. In about 5% of cases, the algorithm does not find a measurement point due to the extremely steep and narrow regions within the fluence maps. In such cases, manual selection of a point is allowed by our code, which is also difficult to ascertain, since the fluence map does not yield itself to an appropriate measurement point selection.

Transient river response, captured by channel steepness and its concavity

NASA Astrophysics Data System (ADS)

Vanacker, Veerle; von Blanckenburg, Friedhelm; Govers, Gerard; Molina, Armando; Campforts, Benjamin; Kubik, Peter W.

2015-01-01

Mountain rivers draining tropical regions are known to be great conveyor belts carrying efficiently more than half of the global sediment flux to the oceans. Many tropical mountain areas are located in tectonically active belts where the hillslope and stream channel morphology are rapidly evolving in response to changes in base level. Here, we report basin-wide denudation rates for an east-west transect through the tropical Andes. Hillslope and channel morphology vary systematically from east to west, reflecting the transition from high relief, strongly dissected topography in the escarpment zones into relatively low relief topography in the inter-Andean valley. The spatial pattern of differential denudation rates reflects the transient adjustment of the landscape to rapid river incision following tectonic uplift and river diversion. In the inter-Andean valley, upstream of the wave of incision, slopes and river channels display a relatively smooth, concave-up morphology and denudation rates (time scale of 104-105 a) are consistently low (3 to 200 mm/ka). In contrast, slopes and river channels of rejuvenated basins draining the eastern cordillera are steep to very steep; and the studied drainage basins show a wide range of denudation rate values (60 to 400 mm/ka) that increase systematically with increasing basin mean slope gradient, channel steepness, and channel convexity. Drainage basins that are characterised by strong convexities in their river longitudinal profiles systematically have higher denudation rates. As such, this is one of the first studies that provides field-based evidence of a correlation between channel concavity and basin mean denudation rates, consistent with process-based fluvial incision models.

Non-native plant invasion along elevation and canopy closure gradients in a Middle Rocky Mountain ecosystem

Treesearch

Joshua P. Averett; Bruce McCune; Catherine G. Parks; Bridgett J. Naylor; Tim DelCurto; Ricardo Mata-Gonz??lez; RunGuo Zang

2016-01-01

Mountain environments are currently among the ecosystems least invaded by non-native species; however, mountains are increasingly under threat of non-native plant invasion. The slow pace of exotic plant invasions in mountain ecosystems is likely due to a combination of low anthropogenic disturbances, low propagule supply, and extreme/steep environmental gradients. The...

Inside out: Speed-dependent barriers to reactive mixing

NASA Astrophysics Data System (ADS)

Kelley, Douglas; Nevins, Thomas

2015-11-01

Reactive mixing occurs wherever fluid flow and chemical or biological growth interact over time and space. Those interactions often lead to steep gradients in reactant and product concentration, arranged in complex spatial structures that can cause wide variation in the global reaction rate and concentrations. By simultaneously measuring fluid velocity and reaction front locations in laboratory experiments with the Belousov-Zhabotinsky reaction, we find that the barriers defining those structures vary dramatically with speed. In particular, we find that increasing flow speed causes reacted regions to move from vortex edges to vortex cores, thus turning the barriers ``inside out''. This observation has implications for reactive mixing of phytoplankton in global oceans.

Valleys and Hillslopes: A Geomorphic Foundation for Landscape Ecology

NASA Astrophysics Data System (ADS)

Martin, Y. E.; Johnson, E. A.

2004-12-01

Moisture-nutrient gradients have been found to be the most important environmental gradients determining the distribution and composition of plant communities. Landscapes on which plant communities exist are composed of valleys and ridgelines, with hillslopes in between them. Since water flow paths are directed down slopes, processes determining hillslope morphology and arrangement play an essential role in plant community organization and dynamics. Hillslope morphology, substrate characteristics and climate determine flow routing and water budgets along slopes. Wetness is a function of transmissivity, contributing area and slope gradient. Movement of nutrients along hillslopes generally follows wetness values, and is affected by soil type. Plant species have different tolerances to wetness and nutrients; hillslope length and slope angle determine the moisture-nutrient gradient, and in turn the shape of plant tolerance curves. Temporal scales required for significant topographic change along hillslopes may often be long compared to those for plant community dynamics. When considered in landscape ecology, hillslope shape and arrangement are thus often considered constants. Although landscape morphology may change over time and among different regions (with tectonic, geomorphic and climatic processes leaving their imprints on landscapes), an attempt has been made in the literature to put forth robust topographic scaling relations. This paper, using a series of examples, explores connections between landscape structure and plant communities. For example, Hack's law states that drainage basins become more elongate as area increases. This implies that basins should have approximately the same proportion of landscape in each hillslope position, suggesting some constancy in contributing area patterns for hillslopes in different-sized basins. Distributions of wetness values and plant population tolerance curves seem to confirm this for smaller basins. Hillslope length and steepness are related to drainage density and relative relief. Various studies have sought relations between drainage density and slope gradient; the latter is a determinant of wetness values. Studies have found both negative and positive correlations between drainage density and slope gradient. The nature of hillslope processes (e.g., overland flow vs. mass wasting dominated, or quickly eroding vs. slowly eroding landscapes) has been used to explain the correlation. It has also been suggested that the degree of channelization may be important in determining slope steepness. Plant species respond to steeper slopes by having narrower tolerance curves and less overlap with other species. This has important implications for biodiversity and plant community organization.

Bifurcation of potential vorticity gradients across the Southern Hemisphere stratospheric polar vortex

NASA Astrophysics Data System (ADS)

Conway, Jonathan; Bodeker, Greg; Cameron, Chris

2018-06-01

The wintertime stratospheric westerly winds circling the Antarctic continent, also known as the Southern Hemisphere polar vortex, create a barrier to mixing of air between middle and high latitudes. This dynamical isolation has important consequences for export of ozone-depleted air from the Antarctic stratosphere to lower latitudes. The prevailing view of this dynamical barrier has been an annulus compromising steep gradients of potential vorticity (PV) that create a single semi-permeable barrier to mixing. Analyses presented here show that this barrier often displays a bifurcated structure where a double-walled barrier exists. The bifurcated structure manifests as enhanced gradients of PV at two distinct latitudes - usually on the inside and outside flanks of the region of highest wind speed. Metrics that quantify the bifurcated nature of the vortex have been developed and their variation in space and time has been analysed. At most isentropic levels between 395 and 850 K, bifurcation is strongest in mid-winter and decreases dramatically during spring. From August onwards a distinct structure emerges, where elevated bifurcation remains between 475 and 600 K, and a mostly single-walled barrier occurs at other levels. While bifurcation at a given level evolves from month to month, and does not always persist through a season, interannual variations in the strength of bifurcation display coherence across multiple levels in any given month. Accounting for bifurcation allows the region of reduced mixing to be better characterised. These results suggest that improved understanding of cross-vortex mixing requires consideration of the polar vortex not as a single mixing barrier but as a barrier with internal structure that is likely to manifest as more complex gradients in trace gas concentrations across the vortex barrier region.

Ultrasensitivity by Molecular Titration in Spatially Propagating Enzymatic Reactions

PubMed Central

Semenov, Sergey N.; Markvoort, Albert J.; Gevers, Wouter B.L.; Piruska, Aigars; de Greef, Tom F.A.; Huck, Wilhelm T.S.

2013-01-01

Delineating design principles of biological systems by reconstitution of purified components offers a platform to gauge the influence of critical physicochemical parameters on minimal biological systems of reduced complexity. Here we unravel the effect of strong reversible inhibitors on the spatiotemporal propagation of enzymatic reactions in a confined environment in vitro. We use micropatterned, enzyme-laden agarose gels which are stamped on polyacrylamide films containing immobilized substrates and reversible inhibitors. Quantitative fluorescence imaging combined with detailed numerical simulations of the reaction-diffusion process reveal that a shallow gradient of enzyme is converted into a steep product gradient by addition of strong inhibitors, consistent with a mathematical model of molecular titration. The results confirm that ultrasensitive and threshold effects at the molecular level can convert a graded input signal to a steep spatial response at macroscopic length scales. PMID:23972857

The role of shelf morphology and antecedent setting in the preservation of palaeo-shoreline (beachrock and aeolianite) sequences: the SE African shelf

NASA Astrophysics Data System (ADS)

Green, Andrew N.; Cooper, J. Andrew G.; Salzmann, Leslee

2018-02-01

On the SE African shelf, a submerged shoreline at a depth of 60 m is examined and its attributes compared between two shelf sectors with different morphologies, yet similar energy regimes. The aim is to assess the controls of antecedent conditioning on shoreline development and later preservation from transgressive ravinement. Using a combination of multibeam bathymetry and single-channel seismic profiles, the stratigraphy and morphology of the shoreline is investigated. Low-gradient bedrock examples reveal several distinctive seismic facies, including onlapping chaotic reflector packages which are interpreted as calcarenite rubble fields. These palaeo-shorelines possess planform equilibrium morphologies, including parabolic dunes and blowout forms along with relict shore platforms. They are strongly associated with incised valleys of last glacial maximum age which underlie the shoreline locations; these provide wide, back -barrier accommodation space during transgression. In contrast, palaeo-shorelines on the steeper-gradient shelf have a simpler stratigraphic arrangement. They are not as well preserved, are generally covered by thick drapes of sediment, and lack the elaborate planform morphologies of their lower-shelf gradient equivalents. Isolated incised valleys and the steep bedrock gradient limit accommodation space. The comparison indicates that antecedent bedrock slope and available accommodation are amongst the dominant controls on overstepping, and thus potential preservation, of palaeo-shorelines on the shelf. Lower-gradient shelves not only promote rapid shoreline translation but, together with wide, sandy back -barrier accommodation, also foster larger barrier volumes. In suitable climates such as in the Mediterranean and other sub-tropical areas, the ensuing shoreline stability promotes rapid and effective cementation of the barrier. In comparison, steep bedrock profiles with limited back -barrier accommodation have much lower preservation potential. Transgressive ravinement is more focussed on steep slopes, effectively removing more material during the ravinement process. The more dynamic environment may also reduce the effectiveness of diagenesis. The potential of beachrock and aeolianite palaeo-shorelines as submerged sea-level indicators may be optimal in low-gradient settings in Mediterranean to subtropical environments.

`Surface-Layer' momentum fluxes in nocturnal slope flows over steep terrain

NASA Astrophysics Data System (ADS)

Oldroyd, H. J.; Pardyjak, E.; Higgins, C. W.; Parlange, M. B.

2017-12-01

A common working definition for the `surface layer' is the lowest 10% of the atmospheric boundary layer (ABL) where the turbulent fluxes are essentially constant. The latter part of this definition is a critical assumption that must hold for accurate flux estimations from land-surface models, wall models, similarity theory, flux-gradient relations and bulk transfer methods. We present cases from observed momentum fluxes in nocturnal slope flows over steep (35.5 degree), alpine terrain in Val Ferret, Switzerland that satisfy the classical definitions of the surface layer and other cases where no traditional surface layer is observed. These cases broadly fall into two distinct flow regimes occurring under clear-sky conditions: (1) buoyancy-driven, `katabatic flow', characterized by an elevated velocity maximum (katabatic jet peak) and (2) `downslope winds', for which larger-scale forcing prevents formation of a katabatic jet. Velocity profiles in downslope wind cases are quite similar to logarithmic profiles typically observed over horizontal and homogeneous terrain, and the corresponding momentum fluxes roughly resemble a constant-flux surface-layer. Contrastingly, velocity profiles in the katabatic regime exhibit a jet-like shape. This jet strongly modulates the corresponding momentum fluxes, which exhibit strong gradients over the shallow katabatic layer and usually change sign near the jet peak, where the velocity gradients also change sign. However, a counter-gradient momentum flux is frequently observed near the jet peak (and sometimes at higher levels), suggesting strong non-local turbulent transport within the katabatic jet layer. We compare our observations with katabatic flow theories and observational studies over shallow-angle slopes and use co-spectral analyses to better identify and understand the non-local transport dynamics. Finally, we show that because of the counter-gradient momentum fluxes, surface layer stability and even local stability can be difficult to characterize because the counter-gradient momentum flux represents a sink in the shear term of turbulence kinetic energy budget equation. These results have broad implications for stability-based modeling and general definitions and assumptions used for the ABL and so-called `surface layer' over steep terrain.

Extent of partial melting beneath the Cascade Range, Oregon: Constraints from gravity anomalies and ideal-body theory

NASA Astrophysics Data System (ADS)

Blakely, Richard J.

1994-02-01

The spatial correlation between a horizontal gradient in heat flow and a horizontal gradient in residual gravity in the Western Cascades of central Oregon has been interpreted by others as evidence of the western edge of a pervasive zone of high temperatures and partial melting at midcrustal depths (5-15 km). Both gradients are steep and relatively linear over north-south distances in excess of 150 km. The Western Cascades gravity gradient is the western margin of a broad gravity depression over most of the Oregon Cascade Range, implying that the midcrustal zone of anomalous temperatures lies throughout this region. Ideal-body theory applied to the gravity gradient, however, shows that the source of the Western Cascades gravity gradient cannot be deeper than about 2.5 km and is considerably shallower in some locations. These calculations are unique determinations, assuming that density contrasts associated with partial melting and elevated temperatures in the crust do not exceed 500 kg/cu m. Consequently, the gravity gradient and the heat flow gradient in the Western Cascades cannot be caused directly by the same source if the heat flow gradient originates at midcrustal depths. This conclusion in itself does not disprove the existence of a widespread midcrustal zone of anomalously high temperatures and partial melting in this area, but it does eliminate a major argument in support of its existence. The gravity gradient is most likely caused by lithologic varitions in the shallow crust, perhaps reflecting a relict boundary between the Cascade extensional trough to the west and Tertiary oceanic crust to the west. The boundary must have formed prior to Oligocene time, the age of the oldest rocks that now conceal it.

A Diffusion Approximation Based on Renewal Processes with Applications to Strongly Biased Run-Tumble Motion.

PubMed

Thygesen, Uffe Høgsbro

2016-03-01

We consider organisms which use a renewal strategy such as run-tumble when moving in space, for example to perform chemotaxis in chemical gradients. We derive a diffusion approximation for the motion, applying a central limit theorem due to Anscombe for renewal-reward processes; this theorem has not previously been applied in this context. Our results extend previous work, which has established the mean drift but not the diffusivity. For a classical model of tumble rates applied to chemotaxis, we find that the resulting chemotactic drift saturates to the swimming velocity of the organism when the chemical gradients grow increasingly steep. The dispersal becomes anisotropic in steep gradients, with larger dispersal across the gradient than along the gradient. In contrast to one-dimensional settings, strong bias increases dispersal. We next include Brownian rotation in the model and find that, in limit of high chemotactic sensitivity, the chemotactic drift is 64% of the swimming velocity, independent of the magnitude of the Brownian rotation. We finally derive characteristic timescales of the motion that can be used to assess whether the diffusion limit is justified in a given situation. The proposed technique for obtaining diffusion approximations is conceptually and computationally simple, and applicable also when statistics of the motion is obtained empirically or through Monte Carlo simulation of the motion.

What the Milky Way bulge reveals about the initial metallicity gradients in the disc

NASA Astrophysics Data System (ADS)

Fragkoudi, F.; Di Matteo, P.; Haywood, M.; Khoperskov, S.; Gomez, A.; Schultheis, M.; Combes, F.; Semelin, B.

2017-11-01

We use APOGEE DR13 data to examine the metallicity trends in the Milky Way (MW) bulge and we explore their origin by comparing two N-body models of isolated galaxies that develop a bar and a boxy/peanut (b/p) bulge. Both models have been proposed as scenarios for reconciling a disc origin of the MW bulge with a negative vertical metallicity gradient. The first model is a superposition of co-spatial, I.e. overlapping, disc populations with different scale heights, kinematics, and metallicities. In this model the thick, metal-poor, and centrally concentrated disc populations contribute significantly to the stellar mass budget in the inner galaxy. The second model is a single disc with an initial steep radial metallicity gradient; this disc is mapped by the bar into the b/p bulge in such a way that the vertical metallicity gradient of the MW bulge is reproduced, as has been shown already in previous works in the literature. However, as we show here, the latter model does not reproduce the positive longitudinal metallicity gradient of the inner disc, nor the metal-poor innermost regions seen in the data. On the other hand, the model with co-spatial thin and thick disc populations reproduces all the aforementioned trends. We therefore see that it is possible to reconcile a (primarily) disc origin for the MW bulge with the observed trends in metallicity by mapping the inner thin and thick discs of the MW into a b/p. For this scenario to reproduce the observations, the α-enhanced, metal-poor, thick disc populations must have a significant mass contribution in the inner regions, as has been suggested for the Milky Way.

Stream gradient Hotspot and Cluster Analysis (SL-HCA) for improving the longitudinal profiles metrics

NASA Astrophysics Data System (ADS)

Troiani, Francesco; Piacentini, Daniela; Seta Marta, Della

2016-04-01

Many researches successfully focused on stream longitudinal profiles analysis through Stream Length-gradient (SL) index for detecting, at different spatial scales, either tectonic structures or hillslope processes. The analysis and interpretation of spatial variability of SL values, both at a regional and local scale, is often complicated due to the concomitance of different factors generating SL anomalies, including the bedrock composition. The creation of lithologically-filtered SL maps is often problematic in areas where homogeneously surveyed geological maps, with a sufficient resolution are unavailable. Moreover, both the SL map classification and the unbiased anomaly detection are rather difficult. For instance, which is the best threshold to define the anomalous SL values? Further, is there a minimum along-channel extent of anomalous SL values for objectively defining over-steeped segments on long-profiles? This research investigates the relevance and potential of a new approach based on Hotspot and Cluster Analysis of SL values (SL-HCA) for detecting knickzones on long-profiles at a regional scale and for fine-tuning the interpretation of their geological-geomorphological meaning. We developed this procedure within a 2800 km2-wide area located in the mountainous sector of the Northern Apennines of Italy. The Getis-Ord Gi∗ statistic is applied for the SL-HCA approach. The value of SL, calculated starting from a 5x5 m Digital Elevation Model, is used as weighting factor and the Gi∗ index is calculated for each 50 m-long channel segment for the whole fluvial system. The outcomes indicate that high positive Gi∗ values imply the clustering of SL anomalies, thus the occurrence of knickzones on the stream long-profiles. Results show that high and very high Gi* values (i.e. values beyond two standard deviations from the mean) correlate well with the principal knickzones detected with existent lithologically-filtered SL maps. Field checks and remote sensing analysis conducted on 52 clusters of high and very high Gi* values indicate that mass movement of slope material represents the dominant process producing over-steeped long-profiles along connected streams, whereas the litho-structure accounts for the main anomalies along disconnected steams. Tectonic structures generally provide to the largest clusters. Our results demonstrate that SL-HCA maps have the same potential of lithologically-filtered SL maps for detecting knickzones due to hillslope processes and/or tectonic structures. The reduced-complexity model derived from SL-HCA approach highly improve the readability of the morphometric outcomes, thus the interpretation at a regional scale of the geological-geomorphological meaning of over-steeped segments on long-profiles. SL-HCA maps are useful to investigate and better interpret knickzones within regions poorly covered by geological data and where field surveys are difficult to be performed.

Environmental Impact Research Program: Reservoir Bank Erosion and Cultural Resources: Experiments in Mapping and Predicting the Erosion of Archeological Sediments at Reservoirs Along the Middle Missouri River with Sequential Historical Aerial Photographs

DTIC Science & Technology

1989-08-01

points on both the photos and base map. Transects placed at 100-m intervals along the waterline, oriented perpendicular to the gradient or slope just...the identifica- tion of major factors influencing bank erosion, independent variables measured included gradient of the land at the intersection of...have a very steep gradient , approaching vertical in some cases, broken only by intermittent minor drainages which have dissected terrace margins. b

The uses and abuses of the acoustic analogy in helicopter rotor noise prediction

NASA Technical Reports Server (NTRS)

Farassat, F.; Brentner, Kenneth S.

1987-01-01

The generation of noise by helicopter rotor blades is considered theoretically, reviewing recent analyses based on the acoustic analogy (where the effect of fluid motion is replaced by fictitious sources in an undisturbed fluid). The fundamental principles of the acoustic approach are explained and illustrated with diagrams; the governing Ffowcs-Williams/Hawkings equations are written with a reformulated quadrupole term; and the directivity of noise produced (1) by regions with steep gradients (such as shock surfaces) and (2) by boundary-layer quadrupoles (tip-vortex and blade wakes) is shown to be the same as that of thickness noise. The need to include both (1) and (2) in acoustic-analogy computations is indicated.

Maximal refraction and superluminal propagation in a gaseous nanolayer.

PubMed

Keaveney, J; Hughes, I G; Sargsyan, A; Sarkisyan, D; Adams, C S

2012-12-07

We present an experimental measurement of the refractive index of high density Rb vapor in a gaseous atomic nanolayer. We use heterodyne interferometry to measure the relative phase shift between two copropagating laser beams as a function of the laser detuning and infer a peak index n=1.26±0.02, close to the theoretical maximum of 1.31. The large index has a concomitant large index gradient creating a region with steep anomalous dispersion where a subnanosecond optical pulse is advanced by >100 ps over a propagation distance of 390 nm, corresponding to a group index n(g)=-(1.0±0.1)×10(5), the largest negative group index measured to date.

Formation and sustainment of internal transport barriers in the International Thermonuclear Experimental Reactor with the baseline heating mixa)

NASA Astrophysics Data System (ADS)

Poli, Francesca M.; Kessel, Charles E.

2013-05-01

Plasmas with internal transport barriers (ITBs) are a potential and attractive route to steady-state operation in ITER. These plasmas exhibit radially localized regions of improved confinement with steep pressure gradients in the plasma core, which drive large bootstrap current and generate hollow current profiles and negative magnetic shear. This work examines the formation and sustainment of ITBs in ITER with electron cyclotron heating and current drive. The time-dependent transport simulations indicate that, with a trade-off of the power delivered to the equatorial and to the upper launcher, the sustainment of steady-state ITBs can be demonstrated in ITER with the baseline heating configuration.

Exploring the limits of the ``SNB'' multi-group diffusion nonlocal model

NASA Astrophysics Data System (ADS)

Brodrick, Jonathan; Ridgers, Christopher; Kingham, Robert

2014-10-01

A correct treatment of nonlocal transport in the presence of steep temperature gradients found in laser and inertial fusion plasmas has long been highly desirable over the use of an ad-hoc flux limiter. Therefore, an implementation of the ``SNB'' nonlocal model (G P Schurtz, P D Nicolaï & M Busquet, Phys. Plas. 7, 4238 (2000)) has been benchmarked against a fully-implicit kinetic code: IMPACT. A variety of scenarios, including relaxation of temperature sinusoids and Gaussians in addition to continuous laser heating have been investigated. Results highlight the effect of neglecting electron inertia (∂f1/∂ t) as well as question the feasibility of a nonlocal model that does not continuously track the evolution of the distribution function. Deviations from the Spitzer electric fields used in the model across steep gradients are also investigated. Regimes of validity for such a model are identified and discussed, and possible improvements to the model are suggested.

The Growth of the Disk Galaxy UGC8802

NASA Astrophysics Data System (ADS)

Chang, R. X.; Shen, S. Y.; Hou, J. L.

2012-07-01

The disk galaxy UGC8802 has high neutral gas content and a flat profile of star formation rate compared to other disk galaxies with similar stellar mass. It also shows a steep metallicity gradient. We construct a chemical evolution model to explore its growth history by assuming its disk grows gradually from continuous gas infall, which is shaped by a free parameter—the infall-peak time. By adopting the recently observed molecular surface density related star formation law, we show that a late infall-peak time can naturally explain the observed high neutral gas content, while an inside-out disk formation scenario can fairly reproduce the steep oxygen abundance gradient. Our results show that most of the observed features of UGC8802 can be well reproduced by simply "turning the knob" on gas inflow with one single parameter, which implies that the observed properties of gas-rich galaxies could also be modeled in a similar way.

SUB-SURFACE MERIDIONAL FLOW, VORTICITY, AND THE LIFETIME OF SOLAR ACTIVE REGIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maurya, R. A.; Ambastha, A., E-mail: ramajor@prl.res.i, E-mail: ambastha@prl.res.i

Solar sub-surface fluid topology provides an indirect approach to examine the internal characteristics of active regions (ARs). Earlier studies have revealed the prevalence of strong flows in the interior of ARs having complex magnetic fields. Using the Doppler data obtained by the Global Oscillation Network Group project for a sample of 74 ARs, we have discovered the presence of steep gradients in meridional velocity at depths ranging from 1.5 to 5 Mm in flare productive ARs. The sample of these ARs is taken from the Carrington rotations 1980-2052 covering the period 2001 August-2007 January. The gradients showed an interesting hemisphericmore » trend of negative (positive) signs in the northern (southern) hemisphere, i.e., directed toward the equator. We have discovered three sheared layers in the depth range of 0-10 Mm, providing evidence of complex flow structures in several ARs. An important inference derived from our analysis is that the location of the deepest zero vertical vorticity is correlated with the remaining lifetime of ARs. This new finding may be employed as a tool for predicting the life expectancy of an AR.« less

Socioeconomic hierarchy and health gradient in Europe: the role of income inequality and of social origins.

PubMed

Chauvel, Louis; Leist, Anja K

2015-11-14

Health inequalities reflect multidimensional inequality (income, education, and other indicators of socioeconomic position) and vary across countries and welfare regimes. To which extent there is intergenerational transmission of health via parental socioeconomic status has rarely been investigated in comparative perspective. The study sought to explore if different measures of stratification produce the same health gradient and to which extent health gradients of income and of social origins vary with level of living and income inequality. A total of 299,770 observations were available from 18 countries assessed in EU-SILC 2005 and 2011 data, which contain information on social origins. Income inequality (Gini) and level of living were calculated from EU-SILC. Logit rank transformation provided normalized inequalities and distributions of income and social origins up to the extremes of the distribution and was used to investigate net comparable health gradients in detail. Multilevel random-slope models were run to post-estimate best linear unbiased predictors (BLUPs) and related standard deviations of residual intercepts (median health) and slopes (income-health gradients) per country and survey year. Health gradients varied across different measures of stratification, with origins and income producing significant slopes after controls. Income inequality was associated with worse average health, but income inequality and steepness of the health gradient were only marginally associated. Linear health gradients suggest gains in health per rank of income and of origins even at the very extremes of the distribution. Intergenerational transmission of status gains in importance in countries with higher income inequality. Countries differ in the association of income inequality and income-related health gradient, and low income inequality may mask health problems of vulnerable individuals with low status. Not only income inequality, but other country characteristics such as familial orientation play a considerable role in explaining steepness of the health gradient.

A hybrid model of laser energy deposition for multi-dimensional simulations of plasmas and metals

NASA Astrophysics Data System (ADS)

Basko, Mikhail M.; Tsygvintsev, Ilia P.

2017-05-01

The hybrid model of laser energy deposition is a combination of the geometrical-optics ray-tracing method with the one-dimensional (1D) solution of the Helmholtz wave equation in regions where the geometrical optics becomes inapplicable. We propose an improved version of this model, where a new physically consistent criterion for transition to the 1D wave optics is derived, and a special rescaling procedure of the wave-optics deposition profile is introduced. The model is intended for applications in large-scale two- and three-dimensional hydrodynamic codes. Comparison with exact 1D solutions demonstrates that it can fairly accurately reproduce the absorption fraction in both the s- and p-polarizations on arbitrarily steep density gradients, provided that a sufficiently accurate algorithm for gradient evaluation is used. The accuracy of the model becomes questionable for long laser pulses simulated on too fine grids, where the hydrodynamic self-focusing instability strongly manifests itself.

ON THE HORSESHOE DRAG OF A LOW-MASS PLANET. II. MIGRATION IN ADIABATIC DISKS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Masset, F. S.; Casoli, J., E-mail: frederic.masset@cea.f, E-mail: jules.casoli@cea.f, E-mail: frederic.masset@cea.f

2009-09-20

We evaluate the horseshoe drag exerted on a low-mass planet embedded in a gaseous disk, assuming the disk's flow in the co-orbital region to be adiabatic. We restrict this analysis to the case of a planet on a circular orbit, and we assume a steady flow in the corotating frame. We also assume that the corotational flow upstream of the U-turns is unperturbed, so that we discard saturation effects. In addition to the classical expression for the horseshoe drag in barotropic disks, which features the vortensity gradient across corotation, we find an additional term which scales with the entropy gradient,more » and whose amplitude depends on the perturbed pressure at the stagnation point of the horseshoe separatrices. This additional torque is exerted by evanescent waves launched at the horseshoe separatrices, as a consequence of an asymmetry of the horseshoe region. It has a steep dependence on the potential's softening length, suggesting that the effect can be extremely strong in the three-dimensional case. We describe the main properties of the co-orbital region (the production of vortensity during the U-turns, the appearance of vorticity sheets at the downstream separatrices, and the pressure response), and we give torque expressions suitable to this regime of migration. Side results include a weak, negative feedback on migration, due to the dependence of the location of the stagnation point on the migration rate, and a mild enhancement of the vortensity-related torque at a large entropy gradient.« less

The adaptation rate of a quantitative trait in an environmental gradient

NASA Astrophysics Data System (ADS)

Hermsen, R.

2016-12-01

The spatial range of a species habitat is generally determined by the ability of the species to cope with biotic and abiotic variables that vary in space. Therefore, the species range is itself an evolvable property. Indeed, environmental gradients permit a mode of evolution in which range expansion and adaptation go hand in hand. This process can contribute to rapid evolution of drug resistant bacteria and viruses, because drug concentrations in humans and livestock treated with antibiotics are far from uniform. Here, we use a minimal stochastic model of discrete, interacting organisms evolving in continuous space to study how the rate of adaptation of a quantitative trait depends on the steepness of the gradient and various population parameters. We discuss analytical results for the mean-field limit as well as extensive stochastic simulations. These simulations were performed using an exact, event-driven simulation scheme that can deal with continuous time-, density- and coordinate-dependent reaction rates and could be used for a wide variety of stochastic systems. The results reveal two qualitative regimes. If the gradient is shallow, the rate of adaptation is limited by dispersion and increases linearly with the gradient slope. If the gradient is steep, the adaptation rate is limited by mutation. In this regime, the mean-field result is highly misleading: it predicts that the adaptation rate continues to increase with the gradient slope, whereas stochastic simulations show that it in fact decreases with the square root of the slope. This discrepancy underscores the importance of discreteness and stochasticity even at high population densities; mean-field results, including those routinely used in quantitative genetics, should be interpreted with care.

Stereo transparency and the disparity gradient limit

NASA Technical Reports Server (NTRS)

McKee, Suzanne P.; Verghese, Preeti

2002-01-01

Several studies (Vision Research 15 (1975) 583; Perception 9 (1980) 671) have shown that binocular fusion is limited by the disparity gradient (disparity/distance) separating image points, rather than by their absolute disparity values. Points separated by a gradient >1 appear diplopic. These results are sometimes interpreted as a constraint on human stereo matching, rather than a constraint on fusion. Here we have used psychophysical measurements on stereo transparency to show that human stereo matching is not constrained by a gradient of 1. We created transparent surfaces composed of many pairs of dots, in which each member of a pair was assigned a disparity equal and opposite to the disparity of the other member. For example, each pair could be composed of one dot with a crossed disparity of 6' and the other with uncrossed disparity of 6', vertically separated by a parametrically varied distance. When the vertical separation between the paired dots was small, the disparity gradient for each pair was very steep. Nevertheless, these opponent-disparity dot pairs produced a striking appearance of two transparent surfaces for disparity gradients ranging between 0.5 and 3. The apparent depth separating the two transparent planes was correctly matched to an equivalent disparity defined by two opaque surfaces. A test target presented between the two transparent planes was easily detected, indicating robust segregation of the disparities associated with the paired dots into two transparent surfaces with few mismatches in the target plane. Our simulations using the Tsai-Victor model show that the response profiles produced by scaled disparity-energy mechanisms can account for many of our results on the transparency generated by steep gradients.

On the metallicity gradients of the Galactic disk as revealed by LSS-GAC red clump stars

NASA Astrophysics Data System (ADS)

Huang, Yang; Liu, Xiao-Wei; Zhang, Hua-Wei; Yuan, Hai-Bo; Xiang, Mao-Sheng; Chen, Bing-Qiu; Ren, Juan-Juan; Sun, Ning-Chen; Wang, Chun; Zhang, Yong; Hou, Yong-Hui; Wang, Yue-Fei; Yang, Ming

2015-08-01

Using a sample of over 70 000 red clump (RC) stars with 5%-10% distance accuracy selected from the LAMOST Spectroscopic Survey of the Galactic Anti-center (LSS-GAC), we study the radial and vertical gradients of the Galactic disk(s) mainly in the anti-center direction, covering a significant volume of the disk in the range of projected Galactocentric radius 7 ≤ RGC ≤ 14 kpc and height from the Galactic midplane 0 ≤ |Z| ≤ 3 kpc. Our analysis shows that both the radial and vertical metallicity gradients are negative across much of the volume of the disk that is probed, and they exhibit significant spatial variations. Near the solar circle (7 ≤ RGC ≤ 115 kpc), the radial gradient has a moderately steep, negative slope of -0.08 dex kpc-1 near the midplane (|Z| < 0.1 kpc), and the slope flattens with increasing |Z|. In the outer disk (11.5 < RGC ≤ 14 kpc), the radial gradients have an essentially constant, much less steep slope of -0.01 dex kpc-1 at all heights above the plane, suggesting that the outer disk may have experienced an evolutionary path different from that of the inner disk. The vertical gradients are found to flatten largely with increasing RGC. However, the vertical gradient of the lower disk (0 ≤ |Z| ≤ 1 kpc) is found to flatten with RGC quicker than that of the upper disk (1 < |Z| ≤ 3 kpc). Our results should provide strong constraints on the theory of disk formation and evolution, as well as the underlying physical processes that shape the disk (e.g. gas flows, radial migration, and internal and external perturbations).

The adaptation rate of a quantitative trait in an environmental gradient.

PubMed

Hermsen, R

2016-11-30

The spatial range of a species habitat is generally determined by the ability of the species to cope with biotic and abiotic variables that vary in space. Therefore, the species range is itself an evolvable property. Indeed, environmental gradients permit a mode of evolution in which range expansion and adaptation go hand in hand. This process can contribute to rapid evolution of drug resistant bacteria and viruses, because drug concentrations in humans and livestock treated with antibiotics are far from uniform. Here, we use a minimal stochastic model of discrete, interacting organisms evolving in continuous space to study how the rate of adaptation of a quantitative trait depends on the steepness of the gradient and various population parameters. We discuss analytical results for the mean-field limit as well as extensive stochastic simulations. These simulations were performed using an exact, event-driven simulation scheme that can deal with continuous time-, density- and coordinate-dependent reaction rates and could be used for a wide variety of stochastic systems. The results reveal two qualitative regimes. If the gradient is shallow, the rate of adaptation is limited by dispersion and increases linearly with the gradient slope. If the gradient is steep, the adaptation rate is limited by mutation. In this regime, the mean-field result is highly misleading: it predicts that the adaptation rate continues to increase with the gradient slope, whereas stochastic simulations show that it in fact decreases with the square root of the slope. This discrepancy underscores the importance of discreteness and stochasticity even at high population densities; mean-field results, including those routinely used in quantitative genetics, should be interpreted with care.

The Footprint of Continental-Scale Ocean Currents on the Biogeography of Seaweeds

PubMed Central

Wernberg, Thomas; Thomsen, Mads S.; Connell, Sean D.; Russell, Bayden D.; Waters, Jonathan M.; Zuccarello, Giuseppe C.; Kraft, Gerald T.; Sanderson, Craig; West, John A.; Gurgel, Carlos F. D.

2013-01-01

Explaining spatial patterns of biological organisation remains a central challenge for biogeographic studies. In marine systems, large-scale ocean currents can modify broad-scale biological patterns by simultaneously connecting environmental (e.g. temperature, salinity and nutrients) and biological (e.g. amounts and types of dispersed propagules) properties of adjacent and distant regions. For example, steep environmental gradients and highly variable, disrupted flow should lead to heterogeneity in regional communities and high species turnover. In this study, we investigated the possible imprint of the Leeuwin (LC) and East Australia (EAC) Currents on seaweed communities across ~7,000 km of coastline in temperate Australia. These currents flow poleward along the west and east coasts of Australia, respectively, but have markedly different characteristics. We tested the hypothesis that, regional seaweed communities show serial change in the direction of current flow and that, because the LC is characterised by a weaker temperature gradient and more un-interrupted along-shore flow compared to the EAC, then coasts influenced by the LC have less variable seaweed communities and lower species turnover across regions than the EAC. This hypothesis was supported. We suggest that this pattern is likely caused by a combination of seaweed temperature tolerances and current-driven dispersal. In conclusion, our findings support the idea that the characteristics of continental-scale currents can influence regional community organisation, and that the coupling of ocean currents and marine biological structure is a general feature that transcends taxa and spatial scales. PMID:24260352

Low Dissipative High Order Shock-Capturing Methods Using Characteristic-Based Filters

NASA Technical Reports Server (NTRS)

Yee, H. C.; Sandham, N. D.; Djomehri, M. J.

1998-01-01

An approach which closely maintains the non-dissipative nature of classical fourth or higher- order spatial differencing away from shock waves and steep gradient regions while being capable of accurately capturing discontinuities, steep gradient and fine scale turbulent structures in a stable and efficient manner is described. The approach is a generalization of the method of Gustafsson and Oisson and the artificial compression method (ACM) of Harten. Spatially non-dissipative fourth or higher-order compact and non-compact spatial differencings are used as the base schemes. Instead of applying a scalar filter as in Gustafsson and Olsson, an ACM like term is used to signal the appropriate amount of second or third-order TVD or ENO types of characteristic based numerical dissipation. This term acts as a characteristic filter to minimize numerical dissipation for the overall scheme. For time-accurate computations, time discretizations with low dissipation are used. Numerical experiments on 2-D vortical flows, vortex-shock interactions and compressible spatially and temporally evolving mixing layers showed that the proposed schemes have the desired property with only a 10% increase in operations count over standard second-order TVD schemes. Aside from the ability to accurately capture shock-turbulence interaction flows, this approach is also capable of accurately preserving vortex convection. Higher accuracy is achieved with fewer grid points when compared to that of standard second-order TVD or ENO schemes. To demonstrate the applicability of these schemes in sustaining turbulence where shock waves are absent, a simulation of 3-D compressible turbulent channel flow in a small domain is conducted.

Low Dissipative High Order Shock-Capturing Methods using Characteristic-Based Filters

NASA Technical Reports Server (NTRS)

Yee, H. C.; Sandham, N. D.; Djomehri, M. J.

1998-01-01

An approach which closely maintains the non-dissipative nature of classical fourth or higher- order spatial differencing away from shock waves and steep gradient regions while being capable of accurately capturing discontinuities, steep gradient and fine scale turbulent structures in a stable and efficient manner is described. The approach is a generalization of the method of Gustafsson and Olsson and the artificial compression method (ACM) of Harten. Spatially non-dissipative fourth or higher-order compact and non-compact spatial differencings are used as the base schemes. Instead of applying a scalar filter as in Gustafsson and Olsson, an ACM like term is used to signal the appropriate amount of second or third-order TVD or ENO types of characteristic based numerical dissipation. This term acts as a characteristic filter to minimize numerical dissipation for the overall scheme. For time-accurate computations, time discretizations with low dissipation are used. Numerical experiments on 2-D vortical flows, vortex-shock interactions and compressible spatially and temporally evolving mixing layers showed that the proposed schemes have the desired property with only a 10% increase in operations count over standard second-order TVD schemes. Aside from the ability to accurately capture shock-turbulence interaction flows, this approach is also capable of accurately preserving vortex convection. Higher accuracy is achieved with fewer grid points when compared to that of standard second-order TVD or ENO schemes. To demonstrate the applicability of these schemes in sustaining turbulence where shock waves are absent, a simulation of 3-D compressible turbulent channel flow in a small domain is conducted.

Historical Contingencies in Microbial Responses to Drought

NASA Astrophysics Data System (ADS)

Hawkes, C.; Waring, B.; Rocca, J.; Kivlin, S.; Giauque, H.; Averill, C.

2014-12-01

Although water is a primary controller of microbial function and we expect climate change to alter water availability in the future, our understanding of how microbial communities respond to a change in moisture and what that means for soil carbon cycling remain poorly understood. In part, this uncertainty arises from a lack of understanding of microbial response mechanisms and how those lead to aggregate soil function. Environmental tracking would be facilitated if microbial communities respond to new climatic conditions via rapid physiological acclimatization, shifts in community composition, or adaptation. In contrast, historical contingencies could be created by dispersal limitation or local adaptation to previous conditions. To address environmental tracking vs. legacies, we examined how soil microbial communities were affected by precipitation at multiple scales and asked whether rainfall was a primary driver of the observed responses. We leveraged a local steep rainfall gradient with field surveys, lab incubations, reciprocal transplants, and rainfall manipulations to approach this problem. Across a steep rainfall gradient, we found that soil microbial communities were strongly associated with historical rainfall, with two-thirds of the variation in community composition explained by mean annual precipitation. In 12-month experimental lab manipulations of soil moisture, soil functional responses were constrained by historical rainfall, with greater activity in soils subjected to their original moisture condition. The constraints of historical rainfall held even after 18 months in reciprocal transplant common gardens along the rainfall gradient and with manipulated dispersal of regional microbial communities. Yet, when water was manipulated at a single site over 4 years, legacies did not develop. Overall, these findings are consistent with long-term rainfall acting as a strong habitat filter and resulting in a legacy of both microbial community composition and physiological capacity that can affect soil carbon cycling. Placing the ecological and evolutionary dynamics of microbial communities in the context of historical and future environmental variation may thus provide us with a framework for improving prediction of ecosystem responses to climate change.

Neutral recycling effects on ITG turbulence

DOE PAGES

Stotler, D. P.; Lang, J.; Chang, C. S.; ...

2017-07-04

Here, the effects of recycled neutral atoms on tokamak ion temperature gradient (ITG) driven turbulence have been investigated in a steep edge pedestal, magnetic separatrix configuration, with the full-f edge gryokinetic code XGC1. An adiabatic electron model has been used; hence, the impacts of neutral particles and turbulence on the density gradient are not considered, nor are electromagnetic turbulence effects. The neutral atoms enhance the ITG turbulence, first, by increasing the ion temperature gradient in the pedestal via the cooling effects of charge exchange and, second, by a relative reduction in themore » $$E\\times B$$ shearing rate.« less

Neutral recycling effects on ITG turbulence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stotler, D. P.; Lang, J.; Chang, C. S.

Here, the effects of recycled neutral atoms on tokamak ion temperature gradient (ITG) driven turbulence have been investigated in a steep edge pedestal, magnetic separatrix configuration, with the full-f edge gryokinetic code XGC1. An adiabatic electron model has been used; hence, the impacts of neutral particles and turbulence on the density gradient are not considered, nor are electromagnetic turbulence effects. The neutral atoms enhance the ITG turbulence, first, by increasing the ion temperature gradient in the pedestal via the cooling effects of charge exchange and, second, by a relative reduction in themore » $$E\\times B$$ shearing rate.« less

Absorption and Modification of Lower Hybrid Waves in the Scrape Off Layer

NASA Astrophysics Data System (ADS)

Parker, R.; Wallace, G.; Shiraiwa, S.; Baek, S.-G.; Faust, I.

2015-11-01

Loss of current drive efficiency of lower hybrid waves at high density in Alcator C-Mod current drive experiments has been attributed, at least in part, to interactions in the SOL. While ray-tracing calculations indicate that collisional absorption and modification of n|| during reflections in the SOL can be significant, their validity can be called into question owing to steep SOL gradients. In order to further quantify these losses, full-wave calculations using a plane-stratified SOL model have been carried out. The results show that the loss resulting from reflections in the SOL can be substantial, with collisional losses accounting for a loss of up to 50% per bounce of the incident wave power. The loss is sensitive to the SOL parameters with the strongest collisional absorption occurring in the case of steep temperature and weak density gradients. Modification of n|| can also be significant when the density gradient and normal to the flux surfaces are not aligned. These effects are less severe for the fast wave since its penetration into the SOL is significantly less than that of the slow wave. Work supported by USDoE awards DE-FC02-99ER54512 and DE-AC02-09CH11466.

Mass and energy flow in prominences

NASA Technical Reports Server (NTRS)

Poland, Arthur I.

1990-01-01

Mass and energy flow in quiescent prominences is considered based on the hypothesis that active region prominences have a different structure and thus different mass and energy flow characteristics. Several important physical parameters have been plotted using the computational model, representing the evolutionary process after the prominence formation. The temperature, velocity, conductive flux, and enthalpy flux are plotted against distance from the highest point in the loop to the coolest part of the prominence. It is shown that the maximum velocity is only about 5 km/s. The model calculations indicate that the transition region of prominences is dominated by complex processes. It is necessary to take into account mass flow at temperatures below 200,000 K, and both mass flow and optical depth effects in hydrogen at temperatures below 30,000 K. Both of these effects lead to a less steep temperature gradient through the prominence corona interface than can be obtained from the conduction alone.

Kinetic equilibrium reconstruction for the NBI- and ICRH-heated H-mode plasma on EAST tokamak

NASA Astrophysics Data System (ADS)

Zhen, ZHENG; Nong, XIANG; Jiale, CHEN; Siye, DING; Hongfei, DU; Guoqiang, LI; Yifeng, WANG; Haiqing, LIU; Yingying, LI; Bo, LYU; Qing, ZANG

2018-04-01

The equilibrium reconstruction is important to study the tokamak plasma physical processes. To analyze the contribution of fast ions to the equilibrium, the kinetic equilibria at two time-slices in a typical H-mode discharge with different auxiliary heatings are reconstructed by using magnetic diagnostics, kinetic diagnostics and TRANSP code. It is found that the fast-ion pressure might be up to one-third of the plasma pressure and the contribution is mainly in the core plasma due to the neutral beam injection power is primarily deposited in the core region. The fast-ion current contributes mainly in the core region while contributes little to the pedestal current. A steep pressure gradient in the pedestal is observed which gives rise to a strong edge current. It is proved that the fast ion effects cannot be ignored and should be considered in the future study of EAST.

The molecular core in G34.3 + 0.2 - Millimeter interferometric observations of HCO(+), H(C-13)N, H(C-15)N, and SO

NASA Technical Reports Server (NTRS)

Carral, Patricia; Welch, William J.

1992-01-01

This study presents high-resolution observations of the molecular core in the star-forming region G34.3 + 0.2. Maps at 6-arcsec resolution of emission and absorption of the J = 1 - 0 transitions of HCO(+), H (C-13)N, H(C-15)N, and of the 2(2) - 1(1) transition of SO were obtained in addition to a map of the 3.4-mm continuum emission from the compact H II component. The HCL(+) emission toward G34.3 + 0.2 traces a warm molecular core about 0.9 pc in size. Emission from H (C-13)N is detected over about 0.3 pc. The cometary H II region lies near the edge of the molecular core. The blueshift of the radio recombination lines with respect to the molecular emission suggests that gas from the H II region is accelerated in a champagne flow caused by a steep gradient in the ambient gas density.

On the feasibility to conduct gradient liquid chromatography separations in narrow-bore columns at pressures up to 2000bar.

PubMed

De Pauw, Ruben; Swier, Tim; Degreef, Bart; Desmet, Gert; Broeckhoven, Ken

2016-11-18

The limits in operating pressures are extended for narrow-bore columns in gradient elution up to 2000bar. As the required pumps for these pressures are incompatible with common chromatographic solvents and are not suitable to apply a mobile phase composition gradient, a mobile phase delivery and injection system is described and experimentally validated which allows to use any possible chromatographic solvent in isocratic and gradient elution. The mobile phase delivery and injection system also allows to perform multiple separations without the need to depressurize the column. This system consists out of 5 dual on/off valves and two large volume loops in which the gradient and equilibration volume of initial mobile phase are loaded by a commercial liquid chromatography pump. The loops are then flushed toward the column at extreme pressures. The mobile phase delivery and injection system is first evaluated in isocratic elution and shows a comparable performance to a state-of-the-art commercial flow-through-needle injector but with twice the pressure rating. Distortion of the loaded gradient by dispersion in the gradient storage loop is studied. The effect of the most important parameters (such as flow rate, pressure and gradient steepness) is experimentally investigated. Different gradient steepnesses and volumes can be applied at different flow rates and operating pressures with a good repeatability. Due to the isobaric operation of the pumps, the gradient is monitored in real-time by a mass flow meter installed at the detector outlet. The chromatograms are then converted from time to volume-base. A separation of a 19-compound sample is performed on a 300×2.1mm column at 1000bar and on a 600×2.1mm column at 2000bar. The peak capacity was found to increase from 141 to 199 and thus scales with L as is predicted by theory. This allows to conclude that the inlet pressure for narrow-bore columns in gradient elution can be increased up to 2000bar without fundamental pressure-induced limitations. Copyright © 2016 Elsevier B.V. All rights reserved.

Frictional Heating of Ions In The F2-region of The Ionosphere

NASA Astrophysics Data System (ADS)

Zhizhko, G. O.; Vlasov, V. G.

Auroral electron beams unstable on the Cherenkov resonance are stabilized by large- scale inhomogeneity of the plasma density during all their way from the acceleration region to the E-region of the ionosphere. The generation of plasma waves by beam is possible only in the region of small plasma density gradients, that always is the area of the F2-region maximum. Thus, collective dissipation of the electron beam energy occurs in the local region with the length about several tens of kilometers. This leads to the intensive heating of the electrons(up to temperatures about 10000 K) and will give origin to the ion upflows with velocity about 1 km/s and density about 109 cm-2 s-1. These flows can result in the ion frictional heating. At the same time ion temperatures reach the values about 5000 K. A numerical simulation of the ion frictional heating in the presence of collective elec- tron heating in the high-latitude F2-region of the ionosphere was performed. The sim- ulation has shown that the most critical parameter for the occurence of the ion fric- tional heating was the the steepness of the plasma density profile above the F2-region maximum.

Enhanced electron mixing and heating in 3-D asymmetric reconnection at the Earth's magnetopause

DOE PAGES

Le, Ari Yitzchak; Daughton, William Scott; Chen, Li -Jen; ...

2017-03-01

Here, electron heating and mixing during asymmetric reconnection are studied with a 3-D kinetic simulation that matches plasma parameters from Magnetospheric Multiscale (MMS) spacecraft observations of a magnetopause diffusion region. The mixing and heating are strongly enhanced across the magnetospheric separatrix compared to a 2-D simulation. The transport of particles across the separatrix in 3-D is attributed to lower hybrid drift turbulence excited at the steep density gradient near the magnetopause. In the 3-D simulation (and not the 2-D simulation), the electron temperature parallel to the magnetic field within the mixing layer is significantly higher than its upstream value inmore » agreement with the MMS observations.« less

Negative permittivity chamber inside a stack of silver nanorings

NASA Astrophysics Data System (ADS)

Chen, Sheng Chung; Shiu Chau, Jr.

2010-05-01

The interactions of silver nanorings with polarized optical wave are numerically studied. If the resonant conditions are tuned, the polarization of incident field, inside the nanoring hole, will be reversed by the single silver nanoring due to the surface plasmon resonance, thus, the nanoring hole becomes a region of which permittivity is negative. Put two identical silver nanorings closely, there are two nodes happened between nanorings. It indicates that there is a very steep gradient of electric field and quasi-standing waves exist between nanorings. If many silver nanorings are lined up, the holes of the nanorings will form a negative permittivity chamber. The more close to the center of the chamber, the more ideal the polarization is reversed.

Characterization of the Navy Fan Channel-to-Lobe Transition: Geomorphology, Gradient, and Structure Imaged through High-Resolution AUV Bathymetry

NASA Astrophysics Data System (ADS)

Carvajal, C.; Paull, C. K.; Caress, D. W.; Anderson, K.; Lundsten, E. M.; Gwiazda, R.; Fildani, A.; Dykstra, M.; McGann, M.; Maier, K. L.; Herguera, J. C.

2016-12-01

Channel to lobe transition zones (CLTZ) are elusive sectors of the seafloor. They record complex interactions between sediment-gravity flows, flow confinement, and gradient that can result in contrasting geomorphologies. If present, structural controls can add additional intricacies. We illustrate such complexities in the Navy Fan CLTZ offshore California/Mexico using AUV-collected high-resolution (1x1x0.25 m) bathymetry and chirp profiles. The AUV bathymetry images the fine scale details of the seafloor, otherwise unresolved in surface-ship-mounted multibeam bathymetry. Three morphological areas standout that in a direction transverse to sediment transport are: 1) An unconfined area with variable but overall steep gradients (0.5o-1.7o), and considerable erosion shown by numerous large scours that truncate underlying strata. These scours are elongate (<500x180 m), deep (<18 m), asymmetric (steeper proximally), and more prominent along steeper gradients; 2) An area of moderate confinement along a smoother, gentler gradient (0.2o-0.5o; 0.9o locally). This area is 8 km long with a channel (WxD: 233x11 m) that transitions basinwards to low confinement (WxD: 1000x4 m); and 3) An area with an escarpment (<25 m high, <19o) and ridge of the San Clemente Fault. We hypothesize that the erosional morphologies of the unconfined areas reflect swifter turbidity currents due to high gradients, which resulted from relief along the San Clemente Fault and probably from differential seafloor aggradation. In the moderate confinement area, the smoother and gentler seafloor may be related to more efficient sediment dispersal able to transfer/deposit sediment to heal structural relief (though not completely) while avoiding significant local aggradation, hence preventing major gradient build up. In the faulted area, the steep and prominent structure reroutes the sediments. The findings of this study have broad application to any seafloor areas with rapid changes of gradient.

The GALAH survey: properties of the Galactic disc(s) in the solar neighbourhood

NASA Astrophysics Data System (ADS)

Duong, L.; Freeman, K. C.; Asplund, M.; Casagrande, L.; Buder, S.; Lind, K.; Ness, M.; Bland-Hawthorn, J.; De Silva, G. M.; D'Orazi, V.; Kos, J.; Lewis, G. F.; Lin, J.; Martell, S. L.; Schlesinger, K.; Sharma, S.; Simpson, J. D.; Zucker, D. B.; Zwitter, T.; Anguiano, B.; Da Costa, G. S.; Hyde, E.; Horner, J.; Kafle, P. R.; Nataf, D. M.; Reid, W.; Stello, D.; Ting, Y.-S.; Wyse, R. F. G.

2018-06-01

Using data from the GALAH pilot survey, we determine properties of the Galactic thin and thick discs near the solar neighbourhood. The data cover a small range of Galactocentric radius (7.9 ≲ R_GC ≲ 9.5 kpc), but extend up to 4 kpc in height from the Galactic plane, and several kpc in the direction of Galactic anti-rotation (at longitude 260° ≤ ℓ ≤ 280°). This allows us to reliably measure the vertical density and abundance profiles of the chemically and kinematically defined `thick' and `thin' discs of the Galaxy. The thin disc (low-α population) exhibits a steep negative vertical metallicity gradient, at d[M/H]/dz = -0.18 ± 0.01 dex kpc-1, which is broadly consistent with previous studies. In contrast, its vertical α-abundance profile is almost flat, with a gradient of d[α/M]/dz = 0.008 ± 0.002 dex kpc-1. The steep vertical metallicity gradient of the low-α population is in agreement with models where radial migration has a major role in the evolution of the thin disc. The thick disc (high-α population) has a weaker vertical metallicity gradient d[M/H]/dz = -0.058 ± 0.003 dex kpc-1. The α-abundance of the thick disc is nearly constant with height, d[α/M]/dz = 0.007 ± 0.002 dex kpc-1. The negative gradient in metallicity and the small gradient in [α/M] indicate that the high-α population experienced a settling phase, but also formed prior to the onset of major Type Ia supernova enrichment. We explore the implications of the distinct α-enrichments and narrow [α/M] range of the sub-populations in the context of thick disc formation.

Heterogeneous Landscapes on Steep Slopes at Low Altitudes as Hotspots of Bird Diversity in a Hilly Region of Nepal in the Central Himalayas.

PubMed

Basnet, Tej B; Rokaya, Maan B; Bhattarai, Bishnu P; Münzbergová, Zuzana

2016-01-01

Understanding factors determining the distribution of species is a key requirement for protecting diversity in a specific area. The aim of this study was to explore the factors affecting diversity and distribution of species of birds on different forested hills in central Nepal. The area is rich in species of birds. Because the area is characterized by steep gradients, we were also interested in the importance of altitude in determining the diversity and species composition of the bird communities. We assessed bird diversity and species composition based on point observations along a gradient of increasing altitude in two valleys (Kathmandu and Palung) in central Nepal. Data on environmental variables were also collected in order to identify the main determinants of bird diversity and species composition of the bird communities. We recorded 6522 individual birds belonging to 146 species, 77 genera and 23 families. Resident birds made up 80% (117 species) of the total dataset. The study supported the original expectation that altitude is a major determinant of species richness and composition of bird communities in the area. More diverse bird communities were found also in areas with steeper slopes. This together with the positive effect of greater heterogeneity suggests that forests on steep slopes intermixed with patches of open habitats on shallow soil at large spatial scales are more important for diverse bird communities than more disturbed habitats on shallow slopes. In addition, we demonstrated that while different habitat characteristics such as presence of forests edges and shrubs play an important role in driving species composition, but they do not affect species richness. This indicates that while habitat conditions are important determinants of the distribution of specific species, the number of niches is determined by large scale characteristics, such as landscape level habitat heterogeneity and altitude. Thus, to protect bird diversity in the mid-hills of central Nepal, we should maintain diverse local habitats (viz. forest, shrubs, open land, etc.) but also make sure the natural habitats on steeper slopes with large scale heterogeneity are maintained.

Heterogeneous Landscapes on Steep Slopes at Low Altitudes as Hotspots of Bird Diversity in a Hilly Region of Nepal in the Central Himalayas

PubMed Central

Basnet, Tej B.; Rokaya, Maan B.; Bhattarai, Bishnu P.; Münzbergová, Zuzana

2016-01-01

Understanding factors determining the distribution of species is a key requirement for protecting diversity in a specific area. The aim of this study was to explore the factors affecting diversity and distribution of species of birds on different forested hills in central Nepal. The area is rich in species of birds. Because the area is characterized by steep gradients, we were also interested in the importance of altitude in determining the diversity and species composition of the bird communities. We assessed bird diversity and species composition based on point observations along a gradient of increasing altitude in two valleys (Kathmandu and Palung) in central Nepal. Data on environmental variables were also collected in order to identify the main determinants of bird diversity and species composition of the bird communities. We recorded 6522 individual birds belonging to 146 species, 77 genera and 23 families. Resident birds made up 80% (117 species) of the total dataset. The study supported the original expectation that altitude is a major determinant of species richness and composition of bird communities in the area. More diverse bird communities were found also in areas with steeper slopes. This together with the positive effect of greater heterogeneity suggests that forests on steep slopes intermixed with patches of open habitats on shallow soil at large spatial scales are more important for diverse bird communities than more disturbed habitats on shallow slopes. In addition, we demonstrated that while different habitat characteristics such as presence of forests edges and shrubs play an important role in driving species composition, but they do not affect species richness. This indicates that while habitat conditions are important determinants of the distribution of specific species, the number of niches is determined by large scale characteristics, such as landscape level habitat heterogeneity and altitude. Thus, to protect bird diversity in the mid-hills of central Nepal, we should maintain diverse local habitats (viz. forest, shrubs, open land, etc.) but also make sure the natural habitats on steeper slopes with large scale heterogeneity are maintained. PMID:26938616

Downscaling Satellite Precipitation with Emphasis on Extremes: A Variational ℓ1-Norm Regularization in the Derivative Domain

NASA Astrophysics Data System (ADS)

Foufoula-Georgiou, E.; Ebtehaj, A. M.; Zhang, S. Q.; Hou, A. Y.

2014-05-01

The increasing availability of precipitation observations from space, e.g., from the Tropical Rainfall Measuring Mission (TRMM) and the forthcoming Global Precipitation Measuring (GPM) Mission, has fueled renewed interest in developing frameworks for downscaling and multi-sensor data fusion that can handle large data sets in computationally efficient ways while optimally reproducing desired properties of the underlying rainfall fields. Of special interest is the reproduction of extreme precipitation intensities and gradients, as these are directly relevant to hazard prediction. In this paper, we present a new formalism for downscaling satellite precipitation observations, which explicitly allows for the preservation of some key geometrical and statistical properties of spatial precipitation. These include sharp intensity gradients (due to high-intensity regions embedded within lower-intensity areas), coherent spatial structures (due to regions of slowly varying rainfall), and thicker-than-Gaussian tails of precipitation gradients and intensities. Specifically, we pose the downscaling problem as a discrete inverse problem and solve it via a regularized variational approach (variational downscaling) where the regularization term is selected to impose the desired smoothness in the solution while allowing for some steep gradients (called ℓ1-norm or total variation regularization). We demonstrate the duality between this geometrically inspired solution and its Bayesian statistical interpretation, which is equivalent to assuming a Laplace prior distribution for the precipitation intensities in the derivative (wavelet) space. When the observation operator is not known, we discuss the effect of its misspecification and explore a previously proposed dictionary-based sparse inverse downscaling methodology to indirectly learn the observation operator from a data base of coincidental high- and low-resolution observations. The proposed method and ideas are illustrated in case studies featuring the downscaling of a hurricane precipitation field.

Galaxy structure from multiple tracers - III. Radial variations in M87's IMF

NASA Astrophysics Data System (ADS)

Oldham, Lindsay; Auger, Matthew

2018-03-01

We present the first constraints on stellar mass-to-light ratio gradients in an early-type galaxy (ETG) using multiple dynamical tracer populations to model the dark and luminous mass structure simultaneously. We combine the kinematics of the central starlight, two globular cluster populations and satellite galaxies in a Jeans analysis to obtain new constraints on M87's mass structure, employing a flexible mass model which allows for radial gradients in the stellar-mass-to-light ratio. We find that, in the context of our model, a radially declining stellar-mass-to-light ratio is strongly favoured. Modelling the stellar-mass-to-light ratio as following a power law, ϒ⋆ ˜ R-μ, we infer a power-law slope μ = -0.54 ± 0.05; equally, parametrizing the stellar-mass-to-light ratio via a central mismatch parameter relative to a Salpeter initial mass function (IMF), α, and scale radius RM, we find α > 1.48 at 95% confidence and RM = 0.35 ± 0.04 kpc. We use stellar population modelling of high-resolution 11-band HST photometry to show that such a steep gradient cannot be achieved by variations in only the metallicity, age, dust extinction and star formation history if the stellar IMF remains spatially constant. On the other hand, the stellar-mass-to-light ratio gradient that we find is consistent with an IMF whose inner slope changes such that it is Salpeter-like in the central ˜0.5 kpc and becomes Chabrier-like within the stellar effective radius. This adds to recent evidence that the non-universality of the IMF in ETGs may be confined to their core regions, and points towards a picture in which the stars in these central regions may have formed in fundamentally different physical conditions.

Downscaling Satellite Precipitation with Emphasis on Extremes: A Variational 1-Norm Regularization in the Derivative Domain

NASA Technical Reports Server (NTRS)

Foufoula-Georgiou, E.; Ebtehaj, A. M.; Zhang, S. Q.; Hou, A. Y.

2013-01-01

The increasing availability of precipitation observations from space, e.g., from the Tropical Rainfall Measuring Mission (TRMM) and the forthcoming Global Precipitation Measuring (GPM) Mission, has fueled renewed interest in developing frameworks for downscaling and multi-sensor data fusion that can handle large data sets in computationally efficient ways while optimally reproducing desired properties of the underlying rainfall fields. Of special interest is the reproduction of extreme precipitation intensities and gradients, as these are directly relevant to hazard prediction. In this paper, we present a new formalism for downscaling satellite precipitation observations, which explicitly allows for the preservation of some key geometrical and statistical properties of spatial precipitation. These include sharp intensity gradients (due to high-intensity regions embedded within lower-intensity areas), coherent spatial structures (due to regions of slowly varying rainfall),and thicker-than-Gaussian tails of precipitation gradients and intensities. Specifically, we pose the downscaling problem as a discrete inverse problem and solve it via a regularized variational approach (variational downscaling) where the regularization term is selected to impose the desired smoothness in the solution while allowing for some steep gradients(called 1-norm or total variation regularization). We demonstrate the duality between this geometrically inspired solution and its Bayesian statistical interpretation, which is equivalent to assuming a Laplace prior distribution for the precipitation intensities in the derivative (wavelet) space. When the observation operator is not known, we discuss the effect of its misspecification and explore a previously proposed dictionary-based sparse inverse downscaling methodology to indirectly learn the observation operator from a database of coincidental high- and low-resolution observations. The proposed method and ideas are illustrated in case studies featuring the downscaling of a hurricane precipitation field.

Topographyc metrics in the southern sector of the Marche foothills: implication for active tectonic analysis

NASA Astrophysics Data System (ADS)

Materazzi, Marco; Aringoli, Domenico; Carducci, Tamara; Cavitolo, Paolo; Farabollini, Piero; Giacopetti, Marco; Pambianchi, Gilberto; Tondi, Emanuele; Troiani, Francesco

2016-04-01

Quantitative geomorphic analysis can be provided a useful contribution to the study of recent tectonics. Some parameters, that quantify the channels morphology, as the Stream Length-Gradient (SL) Index (Hack, 1973) and the Steepness (Ks) Index (Flint, 1974), are generally used to detect anomalies on the expected concave-up equilibrium stream-profile, which can result in local abrupt changes in stream gradient (i.e., knickpoints) and/or broad convexities on stream long-profiles extending for tens of kilometres (i.e., knickzones). The main goal of this work is the study of the morphological and morphometrical features in the southern sector of the Marche Region, with the aim to gain new knowledge on the influences of rock resistance and rock uplift on the fluvial and topographic system. The investigated area is situated in central Italy and it extends from the axial zone of the Umbria-Marche Apennines to the Adriatic Sea, including the southern sector of the Marche Region and belongs to the foredeep domain of the Apennines orogenic system, which has affected by tectonic activity up to very recent times. The rheology of outcropping deposits doesn't allow the strain to be easily recorded at the outcrop scale. The analyses have been aimed at to test the sensitivity of both SL and Ks for evaluating active crustal deformations, acting at different wavelengths on land surface, within a low tectonically active thrust-and-fold belt. Additional purpose was the understanding of the pattern of regional differential crustal activity in the topographic arrangement of the study area In this research project two sets of analysis were conducted. References Hack J.T. 1973. Stream-profile analysis and stream-gradient index. Journal of Research of the U.S. Geological Survey, 1, 421-429. Flint J.J. 1974. Stream gradient as a function of order, magnitude and discharge. Water Resources Research, 10, 969-973.

PPAK wide-field Integral Field Spectroscopy of NGC 628 - II. Emission line abundance analysis

NASA Astrophysics Data System (ADS)

Rosales-Ortega, F. F.; Díaz, A. I.; Kennicutt, R. C.; Sánchez, S. F.

2011-08-01

In this second paper of the series, we present the two-dimensional (2D) emission line abundance analysis of NGC 628, the largest object within the PPAK Integral Field Spectroscopy (IFS) Nearby Galaxies Survey, PINGS. We introduce the methodology applied to the 2D IFS data in order to extract and deal with large spectral samples, from which a 2D abundance analysis can be later performed. We obtain the most complete and reliable abundance gradient of the galaxy up to date, by using the largest number of spectroscopic points sampled in the galaxy, and by comparing the statistical significance of different strong-line metallicity indicators. We find features not previously reported for this galaxy that imply a multimodality of the abundance gradient consistent with a nearly flat distribution in the innermost regions of the galaxy, a steep negative gradient along the disc and a shallow gradient or nearly constant metallicity beyond the optical edge of the galaxy. The N/O ratio seems to follow the same radial behaviour. We demonstrate that the observed dispersion in metallicity shows no systematic dependence with the spatial position, signal-to-noise ratio or ionization conditions, implying that the scatter in abundance for a given radius is reflecting a true spatial physical variation of the oxygen content. Furthermore, by exploiting the 2D IFS data, we were able to construct the 2D metallicity structure of the galaxy, detecting regions of metal enhancement and showing that they vary depending on the choice of the metallicity estimator. The analysis of axisymmetric variations in the disc of NGC 628 suggest that the physical conditions and the star formation history of different symmetric regions of the galaxy have evolved in a different manner. Based on observations made at the Centro Astronómico Hispano Alemán (CAHA) at Calar Alto, operated jointly by the Max-Planck Institut für Astronomie and the Instituto de Astrofísica de Andalucía (CSIC).

40 CFR 230.45 - Riffle and pool complexes.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Section 230.45 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) OCEAN DUMPING SECTION... Impacts on Special Aquatic Sites § 230.45 Riffle and pool complexes. (a) Steep gradient sections of... modification. Note: Possible actions to minimize adverse impacts on site or material characteristics can be...

40 CFR 230.45 - Riffle and pool complexes.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Section 230.45 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) OCEAN DUMPING SECTION... Impacts on Special Aquatic Sites § 230.45 Riffle and pool complexes. (a) Steep gradient sections of... modification. Note: Possible actions to minimize adverse impacts on site or material characteristics can be...

40 CFR 230.45 - Riffle and pool complexes.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Section 230.45 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) OCEAN DUMPING SECTION... Impacts on Special Aquatic Sites § 230.45 Riffle and pool complexes. (a) Steep gradient sections of... modification. Note: Possible actions to minimize adverse impacts on site or material characteristics can be...

Preliminary isostatic residual gravity map of the Tremonton 30' x 60' quadrangle, Box Elder and Cache Counties, Utah, and Franklin and Oneida Counties, Idaho

USGS Publications Warehouse

Langenheim, Victoria; Oaks, R.Q.; Willis, H.; Hiscock, A.I.; Chuchel, Bruce A.; Rosario, Jose J.; Hardwick, C.L.

2014-01-01

A new isostatic residual gravity map of the Tremonton 30' x 60' quadrangle of Utah is based on compilation of preexisting data and new data collected by the Utah and U.S. Geological Surveys. Pronounced gravity lows occur over North Bay, northwest of Brigham City, and Malad and Blue Creek Valleys, indicating significant thickness of low-density Tertiary sedimentary rocks and deposits. Gravity highs coincide with exposures of dense pre-Cenozoic rocks in the Promontory, Clarkston, and Wellsville Mountains. The highest gravity values are located in southern Curlew Valley and may be produced in part by deeper crustal density variations or crustal thinning. Steep, linear gravity gradients coincide with Quaternary faults bounding the Wellsville and Clarkston Mountains. Steep gradients also coincide with the margins of the Promontory Mountains, Little Mountain, West Hills, and the eastern margin of the North Promontory Mountains and may define concealed basin-bounding faults.

Interrogating Seyferts with NebulaBayes: Spatially Probing the Narrow-line Region Radiation Fields and Chemical Abundances

NASA Astrophysics Data System (ADS)

Thomas, Adam D.; Dopita, Michael A.; Kewley, Lisa J.; Groves, Brent A.; Sutherland, Ralph S.; Hopkins, Andrew M.; Blanc, Guillermo A.

2018-04-01

NebulaBayes is a new Bayesian code that implements a general method of comparing observed emission-line fluxes to photoionization model grids. The code enables us to extract robust, spatially resolved measurements of abundances in the extended narrow-line regions (ENLRs) produced by Active Galactic Nuclei (AGN). We observe near-constant ionization parameters but steeply radially declining pressures, which together imply that radiation pressure regulates the ENLR density structure on large scales. Our sample includes four “pure Seyfert” galaxies from the S7 survey that have extensive ENLRs. NGC 2992 shows steep metallicity gradients from the nucleus into the ionization cones. An inverse metallicity gradient is observed in ESO 138-G01, which we attribute to a recent gas inflow or minor merger. A uniformly high metallicity and hard ionizing continuum are inferred across the ENLR of Mrk 573. Our analysis of IC 5063 is likely affected by contamination from shock excitation, which appears to soften the inferred ionizing spectrum. The peak of the ionizing continuum E peak is determined by the nuclear spectrum and the absorbing column between the nucleus and the ionized nebula. We cannot separate variation in this intrinsic E peak from the effects of shock or H II region contamination, but E peak measurements nevertheless give insights into ENLR excitation. We demonstrate the general applicability of NebulaBayes by analyzing a nuclear spectrum from the non-active galaxy NGC 4691 using a H II region grid. The NLR and H II region model grids are provided with NebulaBayes for use by the astronomical community.

ON THE HORSESHOE DRAG OF A LOW-MASS PLANET. I. MIGRATION IN ISOTHERMAL DISKS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Casoli, J.; Masset, F. S., E-mail: jules.casoli@cea.f, E-mail: frederic.masset@cea.f, E-mail: jules.casoli@cea.f

2009-09-20

We investigate the unsaturated horseshoe drag exerted on a low-mass planet by an isothermal gaseous disk. In the globally isothermal case, we use a formalism, based on the use of a Bernoulli invariant, that takes into account pressure effects, and that extends the torque estimate to a region wider than the horseshoe region. We find a result that is strictly identical to the standard horseshoe drag. This shows that the horseshoe drag accounts for the torque of the whole corotation region, and not only of the horseshoe region, thereby deserving to be called corotation torque. We find that evanescent wavesmore » launched downstream of the horseshoe U-turns by the perturbations of vortensity exert a feedback on the upstream region, that render the horseshoe region asymmetric. This asymmetry scales with the vortensity gradient and with the disk's aspect ratio. It does not depend on the planetary mass, and it does not have any impact on the horseshoe drag. Since the horseshoe drag has a steep dependence on the width of the horseshoe region, we provide an adequate definition of the width that needs to be used in horseshoe drag estimates. We then consider the case of locally isothermal disks, in which the temperature is constant in time but depends on the distance to the star. The horseshoe drag appears to be different from the case of a globally isothermal disk. The difference, which is due to the driving of vortensity in the vicinity of the planet, is intimately linked to the topology of the flow. We provide a descriptive interpretation of these effects, as well as a crude estimate of the dependency of the excess on the temperature gradient.« less

A review of the regional geophysics of the Arizona Transition Zone

NASA Technical Reports Server (NTRS)

Hendricks, J. D.; Plescia, J. B.

1991-01-01

A review of existing geophysical information and new data presented in this special section indicate that major changes in crustal properties between the Basin and Range and Colorado Plateau occur in, or directly adjacent to, the region defined as the Arizona Transition Zone. Although this region was designated on a physiographic basis, studies indicate that it is also the geophysical transition between adjoining provinces. The Transition Zone displays anomalous crustal and upper mantle seismic properties, shallow Curie isotherms, high heat flow, and steep down-to-the-plateau Bouguer gravity gradients. Seismic and gravity studies suggest that the change in crustal thickness, from thin crust in the Basin and Range to thick crust in the Colorado Plateau, may occur as a series of steps rather than a planar surface. Anomalous P wave velocities, high heat flow, shallow Curie isotherms, and results of gravity modeling suggest that the upper mantle is heterogeneous in this region. A relatively shallow asthenosphere beneath the Basin and Range and Transition Zone contrasted with a thick lithosphere beneath the Colorado Plateau would be one explanation that would satisfy these geophysical observations.

Metacommunity analysis of amoeboid protists in grassland soils

PubMed Central

Fiore-Donno, Anna Maria; Weinert, Jan; Wubet, Tesfaye; Bonkowski, Michael

2016-01-01

This study reveals the diversity and distribution of two major ubiquitous groups of soil amoebae, the genus Acanthamoeba and the Myxomycetes (plasmodial slime-moulds) that are rarely, if ever, recovered in environmental sampling studies. We analyzed 150 grassland soil samples from three Biodiversity Exploratories study regions in Germany. We developed specific primers targeting the V2 variable region in the first part of the small subunit of the ribosomal RNA gene for high-throughput pyrotag sequencing. From ca. 1 million reads, applying very stringent filtering and clustering parameters to avoid overestimation of the diversity, we obtained 273 acanthamoebal and 338 myxomycete operational taxonomic units (OTUs, 96% similarity threshold). This number is consistent with the genetic diversity known in the two investigated lineages, but unequalled to date by any environmental sampling study. Only very few OTUs were identical to already known sequences. Strikingly different OTUs assemblages were found between the three German regions (PerMANOVA p.value = 0.001) and even between sites of the same region (multiple-site Simpson-based similarity indices <0.4), showing steep biogeographical gradients. PMID:26750872

Method and apparatus for operating an improved thermocline storage unit

DOEpatents

Copeland, R.J.

1982-09-30

A method and apparatus for operating a thermocline storage unit in which an insulated barrier member is provided substantially at the interface region between the hot and cold liquids in the storage tank. The barrier member physically and thermally separates the hot and cold liquids substantially preventing any diffusing or mixing between them and substantially preventing any heat transfer there between. The barrier member follows the rise and fall of the interface region between the liquids as the tank is charged and discharged. Two methods of maintaining it in the interface region are disclosed. With the structure and operation of the present invention and in particular the significant reduction in diffusing or mixing between the hot and cold liquids as well as the significant reduction in the thermal heat transfer between them, the performance of the storage tank is improved. More specifically, the stability of the interface region or thermocline is enhanced and the thickness of the thermocline is reduced producing a corresponding increase in the steepness of the temperature gradient across the thermocline and a more efficiently operating thermocline storage unit.

Metacommunity analysis of amoeboid protists in grassland soils.

PubMed

Fiore-Donno, Anna Maria; Weinert, Jan; Wubet, Tesfaye; Bonkowski, Michael

2016-01-11

This study reveals the diversity and distribution of two major ubiquitous groups of soil amoebae, the genus Acanthamoeba and the Myxomycetes (plasmodial slime-moulds) that are rarely, if ever, recovered in environmental sampling studies. We analyzed 150 grassland soil samples from three Biodiversity Exploratories study regions in Germany. We developed specific primers targeting the V2 variable region in the first part of the small subunit of the ribosomal RNA gene for high-throughput pyrotag sequencing. From ca. 1 million reads, applying very stringent filtering and clustering parameters to avoid overestimation of the diversity, we obtained 273 acanthamoebal and 338 myxomycete operational taxonomic units (OTUs, 96% similarity threshold). This number is consistent with the genetic diversity known in the two investigated lineages, but unequalled to date by any environmental sampling study. Only very few OTUs were identical to already known sequences. Strikingly different OTUs assemblages were found between the three German regions (PerMANOVA p.value = 0.001) and even between sites of the same region (multiple-site Simpson-based similarity indices <0.4), showing steep biogeographical gradients.

Method and apparatus for operating an improved thermocline storage unit

DOEpatents

Copeland, Robert J.

1985-01-01

A method and apparatus for operating a thermocline storage unit in which an insulated barrier member is provided substantially at the interface region between the hot and cold liquids in the storage tank. The barrier member physically and thermally separates the hot and cold liquids substantially preventing any diffusing or mixing between them and substantially preventing any heat transfer therebetween. The barrier member follows the rise and fall of the interface region between the liquids as the tank is charged and discharged. Two methods of maintaining it in the interface region are disclosed. With the structure and operation of the present invention and in particular the significant reduction in diffusing or mixing between the hot and cold liquids as well as the significant reduction in the thermal heat transfer between them, the performance of the storage tank is improved. More specifically, the stability of the interface region or thermocline is enhanced and the thickness of the thermocline is reduced producing a corresponding increase in the steepness of the temperature gradient across the thermocline and a more efficiently operating thermocline storage unit.

Observations and predictability of gap winds in a steep, narrow, fire-prone canyon in central Idaho, USA

NASA Astrophysics Data System (ADS)

Wagenbrenner, N. S.; Forthofer, J.; Gibson, C.; Lamb, B. K.

2017-12-01

Frequent strong gap winds were measured in a deep, steep, wildfire-prone river canyon of central Idaho, USA during July-September 2013. Analysis of archived surface pressure data indicate that the gap wind events were driven by regional scale surface pressure gradients. The events always occurred between 0400 and 1200 LT and typically lasted 3-4 hours. The timing makes these events particularly hazardous for wildland firefighting applications since the morning is typically a period of reduced fire activity and unsuspecting firefighters could be easily endangered by the onset of strong downcanyon winds. The gap wind events were not explicitly forecast by operational numerical weather prediction (NWP) models due to the small spatial scale of the canyon ( 1-2 km wide) compared to the horizontal resolution of operational NWP models (3 km or greater). Custom WRF simulations initialized with NARR data were run at 1 km horizontal resolution to assess whether higher resolution NWP could accurately simulate the observed gap winds. Here, we show that the 1 km WRF simulations captured many of the observed gap wind events, although the strength of the events was underpredicted. We also present evidence from these WRF simulations which suggests that the Salmon River Canyon is near the threshold of WRF-resolvable terrain features when the standard WRF coordinate system and discretization schemes are used. Finally, we show that the strength of the gap wind events can be predicted reasonably well as a function of the surface pressure gradient across the gap, which could be useful in the absence of high-resolution NWP. These are important findings for wildland firefighting applications in narrow gaps where routine forecasts may not provide warning for wind effects induced by high-resolution terrain features.

Cognitive Tests in Early Childhood: Psychometric and Cultural Considerations

ERIC Educational Resources Information Center

Williams, Marian E.; Sando, Lara; Soles, Tamara Glen

2014-01-01

Cognitive assessment of young children contributes to high-stakes decisions because results are often used to determine eligibility for early intervention and special education. Previous reviews of cognitive measures for young children highlighted concerns regarding adequacy of standardization samples, steep item gradients, and insufficient floors…

In Vitro Polarization of Colonoids to Create an Intestinal Stem Cell Compartment

PubMed Central

Attayek, Peter J.; Ahmad, Asad A.; Wang, Yuli; Williamson, Ian; Sims, Christopher E.; Magness, Scott T.; Allbritton, Nancy L.

2016-01-01

The polarity of proliferative and differentiated cellular compartments of colonic crypts is believed to be specified by gradients of key mitogens and morphogens. Indirect evidence demonstrates a tight correlation between Wnt- pathway activity and the basal-luminal patterning; however, to date there has been no direct experimental manipulation demonstrating that a chemical gradient of signaling factors can produce similar patterning under controlled conditions. In the current work, colonic organoids (colonoids) derived from cultured, multicellular organoid fragments or single stem cells were exposed in culture to steep linear gradients of two Wnt-signaling ligands, Wnt-3a and R-spondin1. The use of a genetically engineered Sox9-Sox9EGFP:CAGDsRED reporter gene mouse model and EdU-based labeling enabled crypt patterning to be quantified in the developing colonoids. Colonoids derived from multicellular fragments cultured for 5 days under a Wnt-3a or a combined Wnt-3a and R-spondin1 gradient were highly polarized with proliferative cells localizing to the region of the higher morphogen concentration. In a Wnt-3a gradient, Sox9EGFP polarization was 7.3 times greater than that of colonoids cultured in the absence of a gradient; and the extent of EdU polarization was 2.2 times greater than that in the absence of a gradient. Under a Wnt-3a/R-spondin1 gradient, Sox9EGFP polarization was 8.2 times greater than that of colonoids cultured in the absence of a gradient while the extent of EdU polarization was 10 times greater than that in the absence of a gradient. Colonoids derived from single stem cells cultured in Wnt-3a/R-spondin1 gradients were most highly polarized demonstrated by a Sox9EGFP polarization 20 times that of colonoids grown in the absence of a gradient. This data provides direct evidence that a linear gradient of Wnt signaling factors applied to colonic stem cells is sufficient to direct patterning of the colonoid unit in culture. PMID:27100890

Kinematics of red cell aspiration by fluorescence-imaged microdeformation.

PubMed

Discher, D E; Mohandas, N

1996-10-01

Maps of fluorescing red cell membrane components on a pipette-aspirated projection are quantitated in an effort to elucidate and unify the heterogeneous kinematics of deformation. Transient gradients of diffusing fluorescent lipid first demonstrate the fluidity of an otherwise uniform-density bilayer and corroborate a "universal" calibration scale for relative surface density. A steep but smooth and stable gradient in the densities of the skeleton components spectrin, actin, and protein 4.1 is used to estimate large elastic strains along the aspirated skeleton. The deformation fields are argued to be an unhindered response to loading in the surface normal direction. Density maps intermediate to those of the compressible skeleton and fluid bilayer are exhibited by particular transmembrane proteins (e.g., Band 3) and yield estimates for the skeleton-connected fractions. Such connected proteins appear to occupy a significant proportion of the undeformed membrane surface and can lead to steric exclusion of unconnected integral membrane proteins from regions of network condensation. Consistent with membrane repatterning kinematics in reversible deformation, final vesiculation of the projection tip produces a cell fragment concentrated in freely diffusing proteins but depleted of skeleton.

Geology of selected lava tubes in the Bend Area, Oregon

NASA Technical Reports Server (NTRS)

Greely, R.

1971-01-01

Longitudinal profiles representing 5872.5 m of mapped lava tubes and a photogeologic map relating lava tubes to surface geology, regional structure and topography are presented. Three sets of lava tubes were examined: (1) Arnold Lava Tube System (7km long) composed of collapsed and uncollapsed tube segments and lava ponds, (2) Horse Lava Tube System (11 km long) composed of parallel and anastomosing lava tube segments, and (3) miscellaneous lava tubes. Results of this study tend to confirm the layered lava hypothesis of Ollier and Brown (1965) for lava tube formation; however, there are probably several modes of formation for lava tubes in general. Arnold System is a single series of tubes apparently formed in a single basalt flow on a relatively steep gradient. The advancing flow in which the tubes formed was apparently temporarily halted, resulting in the formation of lava ponds which were inflated and later drained by the lava tube system. Horse System probably formed in multiple, interconnected flows. Pre-flow gradient appears to have been less than for Arnold System, and resulted in meandrous, multiple tube networks.

Multiple zonal jets and convective heat transport barriers in a quasi-geostrophic model of planetary cores

NASA Astrophysics Data System (ADS)

Guervilly, C.; Cardin, P.

2017-10-01

We study rapidly rotating Boussinesq convection driven by internal heating in a full sphere. We use a numerical model based on the quasi-geostrophic approximation for the velocity field, whereas the temperature field is 3-D. This approximation allows us to perform simulations for Ekman numbers down to 10-8, Prandtl numbers relevant for liquid metals (˜10-1) and Reynolds numbers up to 3 × 104. Persistent zonal flows composed of multiple jets form as a result of the mixing of potential vorticity. For the largest Rayleigh numbers computed, the zonal velocity is larger than the convective velocity despite the presence of boundary friction. The convective structures and the zonal jets widen when the thermal forcing increases. Prograde and retrograde zonal jets are dynamically different: in the prograde jets (which correspond to weak potential vorticity gradients) the convection transports heat efficiently and the mean temperature tends to be homogenized; by contrast, in the cores of the retrograde jets (which correspond to steep gradients of potential vorticity) the dynamics is dominated by the propagation of Rossby waves, resulting in the formation of steep mean temperature gradients and the dominance of conduction in the heat transfer process. Consequently, in quasi-geostrophic systems, the width of the retrograde zonal jets controls the efficiency of the heat transfer.

Distinguishing between debris flows and floods from field evidence in small watersheds

USGS Publications Warehouse

Pierson, Thomas C.

2005-01-01

Post-flood indirect measurement techniques to back-calculate flood magnitude are not valid for debris flows, which commonly occur in small steep watersheds during intense rainstorms. This is because debris flows can move much faster than floods in steep channel reaches and much slower than floods in low-gradient reaches. In addition, debris-flow deposition may drastically alter channel geometry in reaches where slope-area surveys are applied. Because high-discharge flows are seldom witnessed and automated samplers are commonly plugged or destroyed, determination of flow type often must be made on the basis of field evidence preserved at the site.

40 CFR 230.45 - Riffle and pool complexes.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 25 2011-07-01 2011-07-01 false Riffle and pool complexes. 230.45... Impacts on Special Aquatic Sites § 230.45 Riffle and pool complexes. (a) Steep gradient sections of streams are sometimes characterized by riffle and pool complexes. Such stream sections are recognizable by...

40 CFR 230.45 - Riffle and pool complexes.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 24 2010-07-01 2010-07-01 false Riffle and pool complexes. 230.45... Impacts on Special Aquatic Sites § 230.45 Riffle and pool complexes. (a) Steep gradient sections of streams are sometimes characterized by riffle and pool complexes. Such stream sections are recognizable by...

From genotype to phenotype: unraveling the complexities of cold adaptation in forest trees

Treesearch

Glenn T. Howe; Sally N. Aitken; David B. Neale; Kathleen D. Jermstad; Nicholas C. Wheeler; Tony H.H Chen

2003-01-01

Adaptation to winter cold in temperate and boreal trees involves complex genetic, physiological, and developmental processes. Genecological studies demonstrate the existence of steep genetic clines for cold adaptation traits in relation to environmental (mostly temperature related) gradients. Population differentiation is generally stronger for cold adaptation traits...

Geologic controls on submarine slope failure along the central U.S. Atlantic margin: Insights from the Currituck Slide Complex

USGS Publications Warehouse

Hill, Jenna C.; Brothers, Daniel S.; Craig, Bradley K.; ten Brink, Uri S.; Chaytor, Jason D.; Flores, Claudia

2017-01-01

Multiple styles of failure, ranging from densely spaced, mass transport driven canyons to the large, slab-type slope failure of the Currituck Slide, characterize adjacent sections of the central U.S. Atlantic margin that appear to be defined by variations in geologic framework. Here we use regionally extensive, deep penetration multichannel seismic (MCS) profiles to reconstruct the influence of the antecedent margin physiography on sediment accumulation along the central U.S. Atlantic continental shelf-edge, slope, and uppermost rise from the Miocene to Present. These data are combined with high-resolution sparker MCS reflection profiles and multibeam bathymetry data across the Currituck Slide Complex. Pre-Neogene allostratigraphic horizons beneath the slope are generally characterized by low gradients and convex downslope profiles. This is followed by the development of thick, prograded deltaic clinoforms during the middle Miocene. Along-strike variations in morphology of a regional unconformity at the top of this middle Miocene unit appear to have set the stage for differing styles of mass transport along the margin. Areas north and south of the Currituck Slide are characterized by oblique margin morphology, defined by an angular shelf-edge and a relatively steep (> 8°), concave slope profile. Upper slope sediment bypass, closely spaced submarine canyons, and small, localized landslides confined to canyon heads and sidewalls characterize these sectors of the margin. In contrast, the Currituck region is defined by a sigmoidal geometry, with a rounded shelf-edge rollover and gentler slope gradient (< 6°). Thick (> 800 m), regionally continuous stratified slope deposits suggest the low gradient Currituck region was a primary depocenter for fluvial inputs during multiple sea level lowstands. These results imply that the rounded, gentle slope physiography developed during the middle Miocene allowed for a relatively high rate of subsequent sediment accumulation, thus providing a mechanism for compaction–induced overpressure that preconditioned the Currituck region for failure. Detailed examination of the regional geological framework illustrates the importance of both sediment supply and antecedent slope physiography in the development of large, potentially unstable depocenters along passive margins.

An ISEE/Whistler model of equatorial electron density in the magnetosphere

NASA Technical Reports Server (NTRS)

Carpenter, D. L.; Anderson, R. R.

1992-01-01

Attention is given to an empirical model of equatorial electron density in the magnetosphere covering the L range 2.25-8. Although the model is primarily intended for application to the local time interval 00-15 MLT, a way to extend the model to the 15-24-MLT period is presented. The model describes, in piecewise fashion, the 'saturated' plasmasphere, the region of steep plasmapause gradients, and the plasma trough. Within the plasmasphere the model profile can be expressed as logne - Sigma-xi, where x1 = -0.3145L + 3.9043 is the principal or 'reference' term, and additional terms account for: a solar cycle variation with a peak at solar maximum; an annual variation with a December maximum; and a semiannual variation with equinoctial maxima.

Impurity seeding for suppression of the near scrape-off layer heat flux feature in tokamak limited plasmas

NASA Astrophysics Data System (ADS)

Nespoli, F.; Labit, B.; Furno, I.; Theiler, C.; Sheikh, U. A.; Tsui, C. K.; Boedo, J. A.; TCV Team

2018-05-01

In inboard-limited plasmas, foreseen to be used in future fusion reactor start-up and ramp down phases, the Scrape-Off Layer (SOL) exhibits two regions: the "near" and "far" SOL. The steep radial gradient of the parallel heat flux associated with the near SOL can result in excessive thermal loads onto the solid surfaces, damaging them and/or limiting the operational space of a fusion reactor. In this article, leveraging the results presented in the study by F. Nespoli et al. [Nucl. Fusion 57, 126029 (2017)], we propose a technique for the mitigation and suppression of the near SOL heat flux feature by impurity seeding. The first successful experimental results from the TCV tokamak are presented and discussed.

Molecular evidence that rough endoplasmic reticulum is the site of calreticulin translation in Petunia pollen tubes growing in vitro.

PubMed

Suwińska, Anna; Lenartowski, Robert; Smoliński, Dariusz Jan; Lenartowska, Marta

2015-07-01

In germinating pollen grains and growing pollen tubes, CRT is translated on ER membrane-bound ribosomes in the regions where its activity is required for stabilization of tip-focused Ca (2+) gradient. Pollen tube growth requires coordination of signaling, exocytosis, and actin cytoskeletal organization. Many of these processes are thought to be controlled by finely tuned regulation of cytoplasmic Ca(2+) in discrete regions of the tube cytoplasm. Most notably, a mechanism must function to maintain a steep gradient of Ca(2+) that exists at the tip of growing pollen tube. Several pieces of evidence point to calreticulin (CRT) as a key Ca(2+)-binding/-buffering protein involved in pollen germination and pollen tube growth. We previously hypothesized that in germinating pollen and growing tubes, CRT is translated on the ribosomes associated with endoplasmic reticulum (ER) in the regions where its activity might be required. In this report, we have addressed this idea by identifying the sites where CRT mRNA, CRT protein, 18S rRNA, and rough ER are localized in Petunia pollen tubes. We observed all four components in the germinal aperture of pollen grains and in subapical regions of elongating tubes. These results seem to support our idea that CRT is translated on ER membrane-bound ribosomes during pollen germination and pollen tube growth. In elongated pollen tubes, we found CRT mainly localized in the subapical zone, where ER and Golgi stacks are abundant. In eukaryotic cells, these organelles serve as mobile intracellular stores of easily releasable Ca(2+), which can be buffered by proteins such as CRT. Therefore, we postulate that subapical-localized CRT is involved in pollen tube growth by maintaining the stable tip-focused Ca(2+) gradient and thus modulating local Ca(2+) concentration within the tube cytoplasm.

Observations of wave-induced pore pressure gradients and bed level response on a surf zone sandbar

NASA Astrophysics Data System (ADS)

Anderson, Dylan; Cox, Dan; Mieras, Ryan; Puleo, Jack A.; Hsu, Tian-Jian

2017-06-01

Horizontal and vertical pressure gradients may be important physical mechanisms contributing to onshore sediment transport beneath steep, near-breaking waves in the surf zone. A barred beach was constructed in a large-scale laboratory wave flume with a fixed profile containing a mobile sediment layer on the crest of the sandbar. Horizontal and vertical pore pressure gradients were obtained by finite differences of measurements from an array of pressure transducers buried within the upper several centimeters of the bed. Colocated observations of erosion depth were made during asymmetric wave trials with wave heights between 0.10 and 0.98 m, consistently resulting in onshore sheet flow sediment transport. The pore pressure gradient vector within the bed exhibited temporal rotations during each wave cycle, directed predominantly upward under the trough and then rapidly rotating onshore and downward as the wavefront passed. The magnitude of the pore pressure gradient during each phase of rotation was correlated with local wave steepness and relative depth. Momentary bed failures as deep as 20 grain diameters were coincident with sharp increases in the onshore-directed pore pressure gradients, but occurred at horizontal pressure gradients less than theoretical critical values for initiation of the motion for compact beds. An expression combining the effects of both horizontal and vertical pore pressure gradients with bed shear stress and soil stability is used to determine that failure of the bed is initiated at nonnegligible values of both forces.