Depositional environments and cyclicity of the Early Ordovician carbonate ramp in the western Tarim Basin (NW China)

NASA Astrophysics Data System (ADS)

Guo, Chuan; Chen, Daizhao; Song, Yafang; Zhou, Xiqiang; Ding, Yi; Zhang, Gongjing

2018-06-01

During the Early Ordovician, the Tarim Basin (NW China) was mainly occupied by an extensive shallow-water carbonate platform, on which a carbonate ramp system was developed in the Bachu-Keping area of the western part of the basin. Three well-exposed typical outcrop sections of the Lower Ordovician Penglaiba Formation were investigated in order to identify the depositional facies and to clarify origins of meter-scale cycles and depositional sequences, thereby the platform evolution. Thirteen lithofacies are identified and further grouped into three depositional facies (associations): peritidal, restricted and open-marine subtidal facies. These lithofacies are vertically stacked into meter-scale, shallowing-upward peritidal and subtidal cycles. The peritidal cycles are mainly distributed in the lower and uppermost parts of the Penglaiba Formation deposited in the inner-middle ramp, and commonly start with shallow subtidal to intertidal facies followed by inter- to supratidal facies. In contrast, the subtidal cycles occur throughout the formation mostly in the middle-outer ramp and are dominated by shallow to relatively deep (i.e., intermediate) subtidal facies. The dominance of asymmetrical and incomplete cycles suggests a dominant control of Earth's orbital forcing on the cyclic deposition on the platform. On the basis of vertical facies and cycle stacking patterns, and accommodation changes illustrated by the Fischer plots from all studied sections, five third-order depositional sequences are recognized in the Penglaiba Formation. Individual sequences comprise a lower transgressive part and an upper regressive one. In shallow-water depositional environments, the transgressive packages are dominated by thicker-than-average subtidal cycles, indicating an increase in accommodation space, whereas regressive parts are mainly represented by thinner-than-average peritidal and subtidal cycles, denoting a decrease in accommodation space. In contrast, in intermediate to deep subtidal environments, transgressive and regressive packages display an opposite trend in accommodation space changes. Sequence boundaries (except the basal and top boundaries of the Penglaiba Formation) are usually represented by laterally traceable, transitional boundary zones without apparent subaerial exposure features. Good correlation of the long-term changes in accommodation space (or sea-level) inferred from vertical stacking patterns of facies and cycles suggests an overriding eustatic control on the formation of meter-scale cycles and third-order depositional sequences as well as platform evolution superimposed with local and/or regional tectonic influence during the Early Ordovician. This study would help understand the controls on the tempo-spatial facies distribution, stratal cyclicity and carbonate platform evolution in the western Tarim Basin during the Early Ordovician, facilitating prediction for favorable subsurface carbonate reservoirs and future hydrocarbon exploration and production in the Penglaiba Formation.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sale, D.M.; Gibeaut, J.C.; Short, J.W.

Following the Exxon Valdez oil spill, sediment traps were deployed in nearshore subtidal areas of Prince William Sound, Alaska (PWS) to monitor particulate chemistry and mineralogy. Complemented by benthic sediment chemistry and core sample stratigraphy at the study sites, results were compared to historical trends and data from other Exxon Valdez studies. These results clearly indicate the transport of oil-laden sediments from oiled shorelines to adjacent subtidal sediments. The composition of hydrocarbons adsorbed to settling particulates at sites adjacent to oiled shorelines matched the PAH pattern of weathered Exxon Valdez crude oil.

Community regulation: the relative importance of recruitment and predation intensity of an intertidal community dominant in a seascape context.

PubMed

Rilov, Gil; Schiel, David R

2011-01-01

Predicting the strength and context-dependency of species interactions across multiple scales is a core area in ecology. This is especially challenging in the marine environment, where populations of most predators and prey are generally open, because of their pelagic larval phase, and recruitment of both is highly variable. In this study we use a comparative-experimental approach on small and large spatial scales to test the relationship between predation intensity and prey recruitment and their relative importance in shaping populations of a dominant rocky intertidal space occupier, mussels, in the context of seascape (availability of nearby subtidal reef habitat). Predation intensity on transplanted mussels was tested inside and outside cages and recruitment was measured with standard larval settlement collectors. We found that on intertidal rocky benches with contiguous subtidal reefs in New Zealand, mussel larval recruitment is usually low but predation on recruits by subtidal consumers (fish, crabs) is intense during high tide. On nearby intertidal rocky benches with adjacent sandy subtidal habitats, larval recruitment is usually greater but subtidal predators are typically rare and predation is weaker. Multiple regression analysis showed that predation intensity accounts for most of the variability in the abundance of adult mussels compared to recruitment. This seascape-dependent, predation-recruitment relationship could scale up to explain regional community variability. We argue that community ecology models should include seascape context-dependency and its effects on recruitment and species interactions for better predictions of coastal community dynamics and structure.

Behaviour of subtidal sandbars in response to nourishments

NASA Astrophysics Data System (ADS)

Radermacher, M.; de Schipper, M. A.; Price, T. D.; Huisman, B. J. A.; Aarninkhof, S. G. J.; Reniers, A. J. H. M.

2018-07-01

The behaviour of subtidal sandbars can be strongly influenced by the introduction of sand nourishments in the coastal system. This study focuses on the impact of nourishments on subtidal bar behaviour at spatio-temporal scales beyond a single nourishment project. It aims to determine the long-term behaviour of subtidal sandbars along an entire coastal cell, taking into account both the unnourished and nourished regime, and covering various types of nourishments. The analysis is based on over 50 years of sandbar evolution along the Delfland coast, a 17-km long coastal cell at the Dutch North Sea coastline protected by groynes and maintained with frequent sand nourishments. Observations reveal clearly different sandbar behaviour during the unnourished (first 20 years) and nourished periods of the dataset. Introduction of the first beach nourishments (nourished sand primarily placed at the subaerial beach) was found to stimulate sandbar development along previously unbarred sections of the coast. Shoreface nourishments (nourished sand placed at the seaward face of the pre-existing subtidal sandbar) tended to migrate shoreward rapidly at a rate of 20 to 60 m/year at this coast, thereby forcing the pre-existing sandbar to weld to the dry beach. An abrupt transition of sandbar dynamics was observed following a major nourishment operation (∼ 37.5 Mm3 of nourished sand) that covered the entire coastal cell. A new, shallow sandbar formed with a degree of alongshore variability that was unprecedented at the Delfland coast over the full study period. These results imply that individual nourishments can influence the formation and migration of individual sandbars, while continued nourishments can fundamentally change long-term sandbar dynamics along an entire coastal cell.

Propagation of Tidal and Subtidal Free Surface Oscillations into River Channels from the South Atlantic Bight

NASA Astrophysics Data System (ADS)

Iyer, S. K.; Cloarec, M.; Yankovsky, A. E.

2014-12-01

Tidal sea level oscillations propagate from continental shelves into river channels in the form of long gravity waves well beyond the limits of salt intrusion. These dynamics were a focus of numerous recent studies, which led to the development of the "tidal river" concept. Subtidal oscillations in the "weather" frequency band (periods from a few days to a few weeks) can exhibit similar propagation upstream the river channel, but have so far attracted less attention from researchers. In this work, we analyze data obtained from USGS stream gauge stations at several rivers flowing into the South Atlantic Bight along with NOAA tide gauge stations located on the adjacent coastline. Subtidal free surface oscillations in river channels decay at a slower rate than tidal oscillations (referenced to their amplitude on the coast), while their propagation speed is lower than at tidal frequencies. Potential to kinetic energy ratio sufficiently far upstream in the river channel becomes comparable for tidal and subtidal oscillations, as effects of earth's rotation become negligible. The results suggest that a coastal storm surge can cause more severe flooding inland along the river channel than tides with comparable coastal amplitude.

Biodiversity and abundance patterns of rock encrusting fauna in a temperate fjord.

PubMed

Kuklinski, Piotr

2013-01-01

Fjords are semi-enclosed systems often with usually strong physical and chemical gradients. These gradients provide the opportunity to test the influence of various physical and chemical factors on biodiversity. However study area of this investigation, Trondheimsfjord, is a large water body where especially salinity gradient along the fjord is not well pronounced. The goal of this study was to establish within a temperate fjord a baseline identifying encrusting fauna on rocks and determine the factors driving changes along the length of the fjord and changing depths. There was no trend in species composition change and increase or decrease in number of species, diversity and number of individuals along the fjord. This was likely due to the relative homogeneity of both substrate (rocks) and environmental parameters. Nevertheless, the influence of fresh water inflow in the vicinity of the river mouth was apparent by the presence of characteristic brackish-water species at these locations. Multidimensional scaling analysis revealed three separate assemblages: intertidal, shallow and deep subtidal (below 50 m). Intertidal assemblages were species poor (one to 11 species) but relatively abundant (six to 2374 indiv./m(2) of rocks). Number of individuals and biomass was highest in the shallow subtidal (2059-13,587 indiv./m(2) of rocks). Overall the highest species number (45) was recorded at 50 m depth which is probably result of low competition pressure yet still relatively high nutrient concentration in comparison to shallower locations. Environmental parameters (i.e., tidal currents, wave action, salinity) change more drastically with depth than along the fjord and these changes are the major driving forces in shaping encrusting assemblages in Trondheimsfjord. Copyright © 2013 Elsevier Ltd. All rights reserved.

Community Regulation: The Relative Importance of Recruitment and Predation Intensity of an Intertidal Community Dominant in a Seascape Context

PubMed Central

Rilov, Gil; Schiel, David R.

2011-01-01

Predicting the strength and context-dependency of species interactions across multiple scales is a core area in ecology. This is especially challenging in the marine environment, where populations of most predators and prey are generally open, because of their pelagic larval phase, and recruitment of both is highly variable. In this study we use a comparative-experimental approach on small and large spatial scales to test the relationship between predation intensity and prey recruitment and their relative importance in shaping populations of a dominant rocky intertidal space occupier, mussels, in the context of seascape (availability of nearby subtidal reef habitat). Predation intensity on transplanted mussels was tested inside and outside cages and recruitment was measured with standard larval settlement collectors. We found that on intertidal rocky benches with contiguous subtidal reefs in New Zealand, mussel larval recruitment is usually low but predation on recruits by subtidal consumers (fish, crabs) is intense during high tide. On nearby intertidal rocky benches with adjacent sandy subtidal habitats, larval recruitment is usually greater but subtidal predators are typically rare and predation is weaker. Multiple regression analysis showed that predation intensity accounts for most of the variability in the abundance of adult mussels compared to recruitment. This seascape-dependent, predation-recruitment relationship could scale up to explain regional community variability. We argue that community ecology models should include seascape context-dependency and its effects on recruitment and species interactions for better predictions of coastal community dynamics and structure. PMID:21887351

Devastating Transboundary Impacts of Sea Star Wasting Disease on Subtidal Asteroids.

PubMed

Montecino-Latorre, Diego; Eisenlord, Morgan E; Turner, Margaret; Yoshioka, Reyn; Harvell, C Drew; Pattengill-Semmens, Christy V; Nichols, Janna D; Gaydos, Joseph K

2016-01-01

Sea star wasting disease devastated intertidal sea star populations from Mexico to Alaska between 2013-15, but little detail is known about its impacts to subtidal species. We assessed the impacts of sea star wasting disease in the Salish Sea, a Canadian / United States transboundary marine ecosystem, and world-wide hotspot for temperate asteroid species diversity with a high degree of endemism. We analyzed roving diver survey data for the three most common subtidal sea star species collected by trained volunteer scuba divers between 2006-15 in 5 basins and on the outer coast of Washington, as well as scientific strip transect data for 11 common subtidal asteroid taxa collected by scientific divers in the San Juan Islands during the spring/summer of 2014 and 2015. Our findings highlight differential susceptibility and impact of sea star wasting disease among asteroid species populations and lack of differences between basins or on Washington's outer coast. Specifically, severe depletion of sunflower sea stars (Pycnopodia helianthoides) in the Salish Sea support reports of major declines in this species from California to Alaska, raising concern for the conservation of this ecologically important subtidal predator.

Devastating Transboundary Impacts of Sea Star Wasting Disease on Subtidal Asteroids

PubMed Central

Montecino-Latorre, Diego; Eisenlord, Morgan E.; Turner, Margaret; Yoshioka, Reyn; Harvell, C. Drew; Pattengill-Semmens, Christy V.; Nichols, Janna D.

2016-01-01

Sea star wasting disease devastated intertidal sea star populations from Mexico to Alaska between 2013–15, but little detail is known about its impacts to subtidal species. We assessed the impacts of sea star wasting disease in the Salish Sea, a Canadian / United States transboundary marine ecosystem, and world-wide hotspot for temperate asteroid species diversity with a high degree of endemism. We analyzed roving diver survey data for the three most common subtidal sea star species collected by trained volunteer scuba divers between 2006–15 in 5 basins and on the outer coast of Washington, as well as scientific strip transect data for 11 common subtidal asteroid taxa collected by scientific divers in the San Juan Islands during the spring/summer of 2014 and 2015. Our findings highlight differential susceptibility and impact of sea star wasting disease among asteroid species populations and lack of differences between basins or on Washington’s outer coast. Specifically, severe depletion of sunflower sea stars (Pycnopodia helianthoides) in the Salish Sea support reports of major declines in this species from California to Alaska, raising concern for the conservation of this ecologically important subtidal predator. PMID:27783620

Up, Down, and All Around: Scale-Dependent Spatial Variation in Rocky-Shore Communities of Fildes Peninsula, King George Island, Antarctica

PubMed Central

Valdivia, Nelson; Díaz, María J.; Holtheuer, Jorge; Garrido, Ignacio; Huovinen, Pirjo; Gómez, Iván

2014-01-01

Understanding the variation of biodiversity along environmental gradients and multiple spatial scales is relevant for theoretical and management purposes. Hereby, we analysed the spatial variability in diversity and structure of intertidal and subtidal macrobenthic Antarctic communities along vertical environmental stress gradients and across multiple horizontal spatial scales. Since biotic interactions and local topographic features are likely major factors for coastal assemblages, we tested the hypothesis that fine-scale processes influence the effects of the vertical environmental stress gradients on the macrobenthic diversity and structure. We used nested sampling designs in the intertidal and subtidal habitats, including horizontal spatial scales ranging from few centimetres to 1000s of metres along the rocky shore of Fildes Peninsula, King George Island. In both intertidal and subtidal habitats, univariate and multivariate analyses showed a marked vertical zonation in taxon richness and community structure. These patterns depended on the horizontal spatial scale of observation, as all analyses showed a significant interaction between height (or depth) and the finer spatial scale analysed. Variance and pseudo-variance components supported our prediction for taxon richness, community structure, and the abundance of dominant species such as the filamentous green alga Urospora penicilliformis (intertidal), the herbivore Nacella concinna (intertidal), the large kelp-like Himantothallus grandifolius (subtidal), and the red crustose red alga Lithothamnion spp. (subtidal). We suggest that in coastal ecosystems strongly governed by physical factors, fine-scale processes (e.g. biotic interactions and refugia availability) are still relevant for the structuring and maintenance of the local communities. The spatial patterns found in this study serve as a necessary benchmark to understand the dynamics and adaptation of natural assemblages in response to observed and predicted environmental changes in Antarctica. PMID:24956114

Larval Behaviours and Their Contribution to the Distribution of the Intertidal Coral Reef Sponge Carteriospongia foliascens

PubMed Central

Abdul Wahab, Muhammad Azmi; de Nys, Rocky; Webster, Nicole; Whalan, Steve

2014-01-01

Sponges (Phylum Porifera) are an evolutionary and ecologically significant group; however information on processes influencing sponge population distributions is surprisingly limited. Carteriospongia foliascens is a common Indo-Pacific sponge, which has been reported from the intertidal to the mesophotic. Interestingly, the distribution of C. foliascens at inshore reefs of the Great Barrier Reef is restricted to the intertidal with no individuals evident in adjacent subtidal habitats. The abundance of C. foliascens and substrate availability was first quantified to investigate the influence of substrate limitation on adult distribution. Pre-settlement processes of larval spawning, swimming speeds, phototaxis, vertical migration, and settlement to intertidal and subtidal substrate cues were also quantified. Notably, suitable settlement substrate (coral rubble) was not limiting in subtidal habitats. C. foliascens released up to 765 brooded larvae sponge−1 day−1 during the day, with larvae (80%±5.77) being negatively phototactic and migrating to the bottom within 40 minutes from release. Subsequently, larvae (up to 58.67%±2.91) migrated to the surface after the loss of the daylight cue (nightfall), and after 34 h post-release >98.67% (±0.67) of larvae had adopted a benthic habit regardless of light conditions. Intertidal and subtidal biofilms initiated similar settlement responses, inducing faster (as early 6 h post-release) and more successful metamorphosis (>60%) than unconditioned surfaces. C. foliascens has a high larval supply and larval behaviours that support recruitment to the subtidal. The absence of C. foliascens in subtidal habitats at inshore reefs is therefore proposed to be a potential consequence of post-settlement mortalities. PMID:24853091

Subtidal Bathymetric Changes by Shoreline Armoring Removal and Restoration Projects

NASA Astrophysics Data System (ADS)

Wallace, J.

2016-12-01

The Salish Sea, a region with a diverse coastline, is altered by anthropogenic shoreline modifications such as seawalls. In recent years, local organizations have moved to restore these shorelines. Current research monitors the changes restoration projects have on the upper beach, lower beach, and intertidal, however little research exists to record possible negative effects on the subtidal. The purpose of this research is to utilize multibeam sonar bathymetric data to analyze possible changes to the seafloor structure of the subtidal in response to shoreline modification and to investigate potential ecosystem consequences of shoreline alteration. The subtidal is home to several species including eelgrass (Zostera marina). Eelgrass is an important species in Puget Sound as it provides many key ecosystem functions including providing habitat for a wide variety of organisms, affecting the physics of waves, and sediment transport in the subtidal. Thus bathymetric changes could impact eelgrass growth and reduce its ability to provide crucial ecosystem services. Three Washington state study sites of completed shoreline restoration projects were used to generate data from areas of varied topographic classification, Seahurst Park in Burien, the Snohomish County Nearshore Restoration Project in Everett, and Cornet Bay State Park on Whidbey Island. Multibeam sonar data was acquired using a Konsberg EM 2040 system and post-processed in Caris HIPS to generate a base surface of one-meter resolution. It was then imported into the ArcGIS software suite for the generation of spatial metrics. Measurements of change were calculated through a comparison of historical and generated data. Descriptive metrics generated included, total elevation change, percent area changed, and a transition matrix of positive and negative change. Additionally, pattern metrics such as, surface roughness, and Bathymetric Position Index (BPI), were calculated. The comparison of historical data to new data at each site allows for a calculation of change and therefore helps to identify any positive or negative consequences of shoreline alteration work. A better understanding of the impacts of shoreline restoration will help to review the current procedures and identify any that need improvement as to reduce impacts to the subtidal ecosystem.

Tidal impacts on the subtidal flow division at the main bifurcation in the Yangtze River Delta

NASA Astrophysics Data System (ADS)

Zhang, Wei; Feng, Haochuan; Hoitink, A. J. F.; Zhu, Yuliang; Gong, Fei; Zheng, Jinhai

2017-09-01

Flow division at bifurcations in the Yangtze Estuary has received ample attention, since it may control the pathways of terrestrial sediments over downstream river branches including the 12.5 m Deepwater Navigation channel. While some efforts have been made to interpret flow division at the bifurcations of the Yangtze Estuary, little attention has been paid to the role of tides. Flow division at estuarine bifurcations is made complicated by tides that propagate from the outlet of the tidal channels into the delta. To quantify the tidal influence on the distribution of river discharge, and more generally, to understand the mechanisms governing the subtidal flow division at the tidally affected bifurcation in the Yangtze River Delta, a two-dimensional hydrodynamic model is employed. In this model, the landward boundary is chosen beyond the tidal limit, where the tidal motion has faded out entirely. The seaward boundary is chosen such that the river discharge does not influence the water level. Subtidal discharges are decomposed using the method of factor separation, to distinguish between the effects of tides, river discharge and river-tide interactions on the subtidal flow division. Results indicate that tides modify the river discharge distribution over distributary channels in the Yangtze River Delta, particularly in the dry season. A significant difference in the subtidal flow division during spring tide and neap tide shows that the tidally averaged flow division over the distributaries in the delta greatly depends on tidal amplitude. By varying the river discharge at the landward boundary and amplitudes and phases of the principal tidal constituents at the seaward boundary of the established model, the sensitivities of the subtidal flow division to the river discharge and tidal amplitude variation were investigated in detail. Generally, the tidal impacts on the subtidal flow division are around 12% to 22%, with river discharge varying from 30,000 m3s-1 to 20,000 m3s-1. This effect on the flow distribution can even overwhelm the effects induced by river discharge based on geometry only, when the flow discharge is lowest. Furthermore, the fortnightly tidal cycle plays an important role in enhancing the inequality of the subtidal flow division caused by the M2 tidal component solely at the tidal bifurcation in the Yangtze River Delta during low flow.

Giant subtidal stromatolites forming in normal salinity waters

USGS Publications Warehouse

Dill, R.F.; Shinn, E.A.; Jones, A.T.; Kelly, K.; Steinen, R.P.

1986-01-01

We report here the discovery of giant lithified subtidal columnar stromatolites (>2 m high) growing in 7-8 m of clear oceanic water in current-swept channels between the Exuma Islands on the eastern Bahama Bank. They grow by trapping ooid and pelletal carbonate sand and synsedimentary precipitation of carbonate cement within a field of giant megaripples. The discovery is important to geologists and biologists because similar organo-sedimentary structures built by a combination of cementation and the trapping of sediment by microbes were the dominant fossil types during the Precambrian. Stromatolites are thought to have been responsible for the production of free oxygen and thus the evolution of animal life1,2. Until the discovery of small lithified subtidal columnar stromatolites in the Bahamas3, the only subtidal marine examples known to be living while undergoing lithification were in the hypersaline waters of Hamelin Pool at Shark Bay, Western Australia4-7. Shark Bay stromatolites range from intertidal to the shallow subtidal with the larger columns reaching 1 m in height. The Shark Bay stromatolites have strongly influenced geological interpretation; by analogy, many ancient stromatolites have been considered to have grown in intertidal and/or hypersaline conditions8, although hypersalinity was not a necessity for growth during the Precambrian because grazing metazoan life had not then evolved. ?? 1986 Nature Publishing Group.

Spatial distribution pattern analysis of subtidal macroalgae assemblages by a non-destructive rapid assessment method

NASA Astrophysics Data System (ADS)

Guinda, Xabier; Juanes, José Antonio; Puente, Araceli; Echavarri-Erasun, Beatriz

2012-01-01

The extensive field work carried out over the last century has allowed the worldwide description of general distribution patterns and specific composition of rocky intertidal communities. However, the information concerning subtidal communities on hard substrates is more recent and scarce due to the difficulties associated with working in such environments. In this work, a non-destructive method is applied to the study and mapping of subtidal rocky bottom macroalgae assemblages on the coast of Cantabria (N Spain) which is quick, easy and economical. Gelidium corneum and Cystoseira baccata were the dominant species, however, the composition and coverage of macroalgae assemblages varied significantly at different locations and depth ranges. The high presence of Laminaria ochroleuca and Saccorhiza polyschides, characteristic of colder waters, shows the transitional character of this coastal area. The results obtained throughout this study have been very useful to the application of the European Water Framework Directive (WFD 2000/60/EC) and could be of great interest for the future conservation and management of these ecosystems (e.g. Habitats Directive 92/43/EEC).

Yaquina Bay Topobathy DEM

EPA Science Inventory

The U.S.EPA contracted with the U.S.ACE to obtain intertidal and subtidal bathymetric soundings of Yaquina Bay between Poole Slough and the South Beach Marina in 2002. These data were compiled with U.S.ACE subtidal soundings from 1999, 1998, 2000 and National Ocean Service soundi...

Improving a prediction system for oil spills in the Yellow Sea: effect of tides on subtidal flow.

PubMed

Kim, Chang-Sin; Cho, Yang-Ki; Choi, Byoung-Ju; Jung, Kyung Tae; You, Sung Hyup

2013-03-15

A multi-nested prediction system for the Yellow Sea using drifter trajectory simulations was developed to predict the movements of an oil spill after the MV Hebei Spirit accident. The speeds of the oil spill trajectories predicted by the model without tidal forcing were substantially faster than the observations; however, predictions taking into account the tides, including both tidal cycle and subtidal periods, were satisfactorily improved. Subtidal flow in the simulation without tides was stronger than in that with tides because of reduced frictional effects. Friction induced by tidal stress decelerated the southward subtidal flows driven by northwesterly winter winds along the Korean coast of the Yellow Sea. These results strongly suggest that in order to produce accurate predictions of oil spill trajectories, simulations must include tidal effects, such as variations within a tidal cycle and advections over longer time scales in tide-dominated areas. Copyright © 2012 Elsevier Ltd. All rights reserved.

Stratigraphy and depositional environment of early Mississippian Joana limestone of east-central Nevada

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gilmore, T.

1987-08-01

The Early Mississippian Joana Limestone in the southern Schell Creek and Egan Ranges of east-central Nevada is divided into nine rock types: mudstone, fossiliferous mudstone, wackestone, peloidal wackestone, pelmatozoan wackestone, pelmatozoan packstone, pelmatozoan grainstone, and ooid packstone. From the combined rock type and larger scale outcrop information, three depositional facies were identified: (1) unbedded subtidal, (2) bedded subtidal, and (3) restricted subtidal, each containing a unique set of diagnostic microfacies. Facies thicknesses, lithologies, and contacts with adjacent stratigraphic units indicate a highly varied paleotopography of localized highs and basins during Joana deposition. It is suggested that Waulsortian-type buildups occur downslopemore » of some paleohighs in the unbedded subtidal facies. An age of upper Kinderhookian to lowest Osagean within the Mississippian Period was determined for the Joana, based primarily on conodonts and foraminifera. In the middle beds of the Joana, the previously unreported upper Siphonodella crenulata conodont zone occurs and relates the timing of the Joana to regional geologic events. Color alteration indices of these conodonts are 1.5 to 2, and occur in the oil generation window. Additionally, oil staining was noted in numerous samples primarily from the lower half of the formation, represented by the unbedded subtidal facies. Porosities of the formation are varied, ranging from no visible porosity to over 20% interparticle porosity in some pelmatozoan grainstones.« less

Flexibility of Physiological Traits Underlying Inter-Individual Growth Differences in Intertidal and Subtidal Mussels Mytilusgalloprovincialis

PubMed Central

Fernández-Reiriz, María José; Irisarri, Jade; Labarta, Uxio

2016-01-01

Mussel seed (Mytilusgalloprovincialis) gathered from the intertidal and subtidal environments of a Galician embayment (NW, Spain) were maintained in the laboratory during five months to select fast (F) and slow (S) growing mussels. The physiological basis underlying inter-individual growth variations were compared for F and S mussels from both origins. Fast growing seemed to be a consequence of greater energy intake (20% higher clearance and ingestion rate) and higher food absorption rate coupled with low metabolic costs. The enhanced energy absorption (around 65% higher) resulted in 3 times higher Scope for Growth in F mussels (20.5±4.9 J h−1) than S individuals (7.3±1.1 J h−1). The higher clearance rate of F mussels appears to be linked with larger gill filtration surface compared to S mussels. Intertidal mussels showed higher food acquisition and absorption per mg of organic weight (i.e. mass-specific standardization) than subtidal mussels under the optimal feeding conditions of the laboratory. However, the enhanced feeding and digestive rates were not enough to compensate for the initial differences in tissue weight between mussels of similar shell length collected from the intertidal and subtidal environments. At the end of the experiment, subtidal individuals had higher gill efficiency, which probably lead to higher total feeding and absorption rates relative to intertidal individuals. PMID:26849372

Biodiversity hotspot for marine invertebrates around the Dokdo, East Sea, Korea: Ecological checklist revisited.

PubMed

Song, Sung Joon; Park, Jinsoon; Ryu, Jongseong; Rho, Hyun Soo; Kim, Won; Khim, Jong Seong

2017-06-30

We extensively reviewed the macrozoobenthos around Dokdo, Korea, by analyzing metadata collected over the past 50years. The Dokdo macrozoobenthos was represented by 578 species belonging to 243 families from 12 phyla, where four major phyla (or classes) collectively accounted for 86% to total. Mollusks, arthropods, and cnidarians were semi-equally occurred in intertidal and subtidal areas, while polychetes dominated the subtidal zone. The northern most region of Dokdo had the greatest biodiversity (173 species). The taxonomic distinctness analysis (delta+) indicated a close association between species by region, although the number of species varied greatly. About half of the species did not occur cross the locations (n=20), indicating strong habitat preferences of Dokdo macrofaunal assemblages. Overall, the diversity of Dokdo was greater than that of Ulleung Island (east coast), but comparable to that of the well-developed tidal flats in the western Korean waters, highlighting its status as a biodiversity hotspot. Copyright © 2017 Elsevier Ltd. All rights reserved.

Integrated sedimentological and ichnological characteristics of a wave-dominated, macrotidal coast: a case study from the intertidal shoreface of the Dongho coast, southwest Korea

NASA Astrophysics Data System (ADS)

Yang, Byong Cheon; Chang, Tae Soo

2018-04-01

Generalized coastal facies models invariably assume that tidal flats and intertidally exposed shorefaces along macrotidal coasts are tide-dominated. Recent advances in coastal sedimentology, however, have revealed that wave-dominated macrotidal flats also occur in a wide range of coastal settings, in particular where tidal modulation forces the lateral translation of the wave-affected zone across the tidally exposed shoreface with the rising tide. Despite tidal modulation, the depositional character in the latter case (abundant storm deposits) exhibits a high degree of similarity with conventional subtidal shorefaces, implying that it is inherently difficult to distinguish between the two coastal systems in the rock record. In the present study, integrated sedimentological and ichnological data from the Dongho coast, which is located along the southwest coast of Korea, provide valuable information for the establishment of facies criteria that can assist in the recognition of such coastal deposits. In fact, the sedimentary character of the study area, which is dominated by an abundance of wave-formed structures, resembles that generally associated with subtidal shorefaces. In addition, the depositional processes responsible for sediment accumulation are, in the present case, also strongly influenced by pronounced seasonal variations in wave energy. In this context, the study has revealed a number of major features that appear to be characteristic of wave-dominated intertidal flats and shorefaces: (1) firmground muds may be encountered on the beach face, where intense swash-backwash motions are dominant; (2) the thickness of storm deposits decreases landward, reflecting the progressive decrease in wave energy; (3) ichnologically, there is an offshore shift in the dominance of trace fossils from the Skolithos ichnofacies, including Ophiomorpha, Thalassinoides and Psilonichnus, to a proximal expression of the Cruziana ichnofacies, which includes Siphonichnus and Asterosoma; (4) compared with subtidal shorefaces, the overall ichnological suite is represented by a substantial reduction in diversity and less uniformly distributed burrows. Although these findings have not yet been applied to the rock record, they should nevertheless assist in the distinction between corresponding coastal deposits.

Homing behaviour and individual identification of the pipefish Nerophis lumbriciformis (Pisces; Syngnathidae): a true intertidal resident?

NASA Astrophysics Data System (ADS)

Monteiro, Nuno Miguel; Vieira, Maria da Natividade; Almada, Vitor

2005-04-01

Syngnathids have been the focus of growing interest due to their peculiar reproductive biology and vulnerability to environmental degradation and overcollecting. In this study, near the south limit of the species' geographic distribution, a description of the homing behaviour of the worm pipefish, Nerophis lumbriciformis, based on the unique facial pigmentation patterns, is presented. Even though the amount of facial pigmentation was substantially higher in larger adult females, suggesting that it can be part of the secondary sexual repertoire of this sex role reversed species, this technique allowed for the positive identification of adult individuals (males and females) during at least 19 months. Recaptures showed that this pipefish shows a strong homing behaviour, with individuals being regularly captured within less than 2 m of the original identification event. The absence of horizontal migrations to adjacent areas and the observation of adults in the subtidal, together with the overall low number of recaptures (even though some individuals were cyclically resighted) highlighted the fact that the intertidal is not N. lumbriciformis' permanent residence. This observation also demonstrates that the estimation of the population size, important for conservation purposes, based solely on intertidal data can be misleading because captured individuals are only a fraction of a larger, mainly subtidal, population.

Benthic macrofauna habitat associations in Willapa Bay, Washington, USA

NASA Astrophysics Data System (ADS)

Ferraro, Steven P.; Cole, Faith A.

2007-02-01

Estuary-wide benthic macrofauna-habitat associations in Willapa Bay, Washington, United States, were determined for 4 habitats (eelgrass [ Zostera marina], Atlantic cordgrass [ Spartina alterniflora], mud shrimp [ Upogebia pugettensis], ghost shrimp [ Neotrypaea californiensis]) in 1996 and 7 habitats (eelgrass, Atlantic cordgrass, mud shrimp, ghost shrimp, oyster [ Crassostrea gigas], bare mud/sand, subtidal) in 1998. Most benthic macrofaunal species inhabited multiple habitats; however, 2 dominants, a fanworm, Manayunkia aestuarina, in Spartina, and a sand dollar, Dendraster excentricus, in subtidal, were rare or absent in all other habitats. Benthic macrofaunal Bray-Curtis similarity varied among all habitats except eelgrass and oyster. There were significant differences among habitats within- and between-years on several of the following ecological indicators: mean number of species ( S), abundance ( A), biomass ( B), abundance of deposit (AD), suspension (AS), and facultative (AF) feeders, Swartz's index (SI), Brillouin's index ( H), and jackknife estimates of habitat species richness (HSR). In the 4 habitats sampled in both years, A was about 2.5× greater in 1996 (a La Niña year) than 1998 (a strong El Niño year) yet relative values of S, A, B, AD, AS, SI, and H among the habitats were not significantly different, indicating strong benthic macrofauna-habitat associations despite considerable climatic and environmental variability. In general, the rank order of habitats on indicators associated with high diversity and productivity (high S, A, B, SI, H, HSR) was eelgrass = oyster ≥ Atlantic cordgrass ≥ mud shrimp ≥ bare mud/sand ≥ ghost shrimp = subtidal. Vegetation, burrowing shrimp, and oyster density and sediment %silt + clay and %total organic carbon were generally poor, temporally inconsistent predictors of ecological indicator variability within habitats. The benthic macrofauna-habitat associations in this study can be used to help identify critical habitats, prioritize habitats for environmental protection, index habitat suitability, assess habitat equivalency, and as habitat value criteria in ecological risk assessments in Willapa Bay.

Upper temperature limits of tropical marine ectotherms: global warming implications.

PubMed

Nguyen, Khanh Dung T; Morley, Simon A; Lai, Chien-Houng; Clark, Melody S; Tan, Koh Siang; Bates, Amanda E; Peck, Lloyd S

2011-01-01

Animal physiology, ecology and evolution are affected by temperature and it is expected that community structure will be strongly influenced by global warming. This is particularly relevant in the tropics, where organisms are already living close to their upper temperature limits and hence are highly vulnerable to rising temperature. Here we present data on upper temperature limits of 34 tropical marine ectotherm species from seven phyla living in intertidal and subtidal habitats. Short term thermal tolerances and vertical distributions were correlated, i.e., upper shore animals have higher thermal tolerance than lower shore and subtidal animals; however, animals, despite their respective tidal height, were susceptible to the same temperature in the long term. When temperatures were raised by 1°C hour(-1), the upper lethal temperature range of intertidal ectotherms was 41-52°C, but this range was narrower and reduced to 37-41°C in subtidal animals. The rate of temperature change, however, affected intertidal and subtidal animals differently. In chronic heating experiments when temperature was raised weekly or monthly instead of every hour, upper temperature limits of subtidal species decreased from 40°C to 35.4°C, while the decrease was more than 10°C in high shore organisms. Hence in the long term, activity and survival of tropical marine organisms could be compromised just 2-3°C above present seawater temperatures. Differences between animals from environments that experience different levels of temperature variability suggest that the physiological mechanisms underlying thermal sensitivity may vary at different rates of warming.

Agarolytic culturable bacteria associated with three antarctic subtidal macroalgae.

PubMed

Sánchez Hinojosa, Verónica; Asenjo, Joel; Leiva, Sergio

2018-05-21

Bacterial communities of Antarctic marine macroalgae remain largely underexplored in terms of diversity and biotechnological applications. In this study, three Antarctic subtidal macroalgae (Himantothallus grandifolius, Pantoneura plocamioides and Plocamium cartilagineum), two of them endemic of Antarctica, were investigated as a source for isolation of agar-degrading bacteria. A total of 21 epiphytic isolates showed agarolytic activity at low temperature on agar plates containing agar as the sole carbon source. 16S rRNA identification showed that the agar-degrading bacteria belonged to the genera Cellulophaga, Colwellia, Lacinutrix, Olleya, Paraglaciecola, Pseudoalteromonas and Winogradskyella. The agarase enzyme from a potential new species of the genus Olleya was selected for further purification. The enzyme was purified from the culture supernatant of Olleya sp. HG G5.3 by ammonium sulfate precipitation and ion-exchange chromatography. Molecular weight of the agarase was estimated to be 38 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). The purified enzyme exhibited activity at 4 °C, retaining > 50% of its maximum activity at this temperature. This is the first study reporting the phylogeny of agar-degrading bacteria isolated from Antarctic subtidal macroalgae and the results suggest the huge potential of Antarctic algae-associated bacteria as a source of cold-active hydrolytic enzymes of biotechnological interest.

Community shelter use in response to two benthic decapod predators in the Long Island Sound

PubMed Central

Reagan, Dugan; Crivello, Joseph F.

2016-01-01

To investigate community shelter effects of two invasive decapod species, Hemigrapsus sanguineus and Carcinus maenas, in the Long Island Sound (LIS), we deployed artificial shelters in the intertidal and immediate subtidal zones. These consisted of five groups during the summer: a control, a resident H. sanguineus male or female group, and a resident C. maenas male or female group. We quantified utilization of the shelters at 24 h by counting crabs and fish present. We found significant avoidance of H. sanguineus in the field by benthic hermit crabs (Pagurus spp.) and significant avoidance of C. maenas by the seaboard goby (Gobiosoma ginsburgi). The grubby (Myoxocephalus aenaeus) avoided neither treatment, probably since it tends to be a predator of invertebrates. H. sanguineus avoided C. maenas treatments, whereas C. maenas did not avoid any treatment. Seasonal deployments in the subtidal indicated cohabitation of a number of benthic species in the LIS, with peak shelter use corresponding with increased predation and likely reproductive activity in spring and summer for green crabs (C. maenas), hermit crabs (Pagurus spp.), seaboard gobies (G. ginsburgi), and grubbies (Myoxocephalus aenaeus). PMID:27547570

Community shelter use in response to two benthic decapod predators in the Long Island Sound.

PubMed

Hudson, David M; Reagan, Dugan; Crivello, Joseph F

2016-01-01

To investigate community shelter effects of two invasive decapod species, Hemigrapsus sanguineus and Carcinus maenas, in the Long Island Sound (LIS), we deployed artificial shelters in the intertidal and immediate subtidal zones. These consisted of five groups during the summer: a control, a resident H. sanguineus male or female group, and a resident C. maenas male or female group. We quantified utilization of the shelters at 24 h by counting crabs and fish present. We found significant avoidance of H. sanguineus in the field by benthic hermit crabs (Pagurus spp.) and significant avoidance of C. maenas by the seaboard goby (Gobiosoma ginsburgi). The grubby (Myoxocephalus aenaeus) avoided neither treatment, probably since it tends to be a predator of invertebrates. H. sanguineus avoided C. maenas treatments, whereas C. maenas did not avoid any treatment. Seasonal deployments in the subtidal indicated cohabitation of a number of benthic species in the LIS, with peak shelter use corresponding with increased predation and likely reproductive activity in spring and summer for green crabs (C. maenas), hermit crabs (Pagurus spp.), seaboard gobies (G. ginsburgi), and grubbies (Myoxocephalus aenaeus).

Spatial patterns of sub-tidal seagrasses and their tissue nutrients in the Torres Strait, northern Australia: Implications for management

NASA Astrophysics Data System (ADS)

Sheppard, James K.; Carter, Alex B.; McKenzie, Len J.; Pitcher, C. Roland; Coles, Robert G.

2008-09-01

The distribution and nutritional profiles of sub-tidal seagrasses from the Torres Strait were surveyed and mapped across an area of 31,000 km 2. Benthic sediment composition, water depth, seagrass species type and nutrients were sampled at 168 points selected in a stratified representative pattern. Eleven species of seagrass were present at 56 (33.3%) of the sample points. Halophila spinulosa, Halophila ovalis, Cymodocea serrulata and Syringodium isoetifolium were the most common species and these were nutrient profiled. Sub-tidal seagrass distribution (and associated seagrass nutrient concentrations) was generally confined to northern-central and south-western regions of the survey area (

Modelling Wind Effects on Subtidal Salinity in Apalachicola Bay, Florida

NASA Astrophysics Data System (ADS)

Huang, W.; Jones, W. K.; Wu, T. S.

2002-07-01

Salinity is an important factor for oyster and estuarine productivity in Apalachicola Bay. Observations of salinity at oyster reefs have indicated a high correlation between subtidal salinity variations and the surface winds along the bay axis in an approximately east-west direction. In this paper, we applied a calibrated hydrodynamic model to examine the surface wind effects on the volume fluxes in the tidal inlets and the subtidal salinity variations in the bay. Model simulations show that, due to the large size of inlets located at the east and west ends of this long estuary, surface winds have significant effects on the volume fluxes in the estuary inlets for the water exchanges between the estuary and ocean. In general, eastward winds cause the inflow from the inlets at the western end and the outflow from inlets at the eastern end of the bay. Winds at 15 mph speed in the east-west direction can induce a 2000 m3 s-1 inflow of saline seawater into the bay from the inlets, a rate which is about 2·6 times that of the annual average freshwater inflow from the river. Due to the varied wind-induced volume fluxes in the inlets and the circulation in the bay, the time series of subtidal salinity at oyster reefs considerably increases during strong east-west wind conditions in comparison to salinity during windless conditions. In order to have a better understanding of the characteristics of the wind-induced subtidal circulation and salinity variations, the researchers also connected model simulations under constant east-west wind conditions. Results show that the volume fluxes are linearly proportional to the east-west wind stresses. Spatial distributions of daily average salinity and currents clearly show the significant effects of winds on the bay.

Shallow-water brittle stars (Echinodermata: Ophiuroidea) from Araçá Bay (Southeastern Brazil), with spatial distribution considerations.

PubMed

Alitto, Renata A S; Bueno, Maristela L; Guilherme, Pablo D B; Di Domenico, Maikon; Christensen, Ana Beardsley; Borges, Michela

2018-04-05

The detailed study of arm ossicles, particularly the lateral arm plates, is providing valuable information in the elucidation of ophiuroid taxonomy. The present study describes in detail 16 species of brittle stars from Araçá Bay, Brazil. This information is used to construct the first interactive electronic key, providing a valuable resource for a broad range of researchers. Brittle stars families were divided into three groups based on their spatial distribution: i) infaunal species of intertidal and shallow subtidal belonging to Amphiuridae and Ophiactidae, ii) epizoic species belonging to Amphiuridae, Ophiactidae, and Ophiotrichidae and, iii) epifaunal species of the subtidal belonging to Ophiodermatidae and Hemieuryalidae. In the global context of recent revisions of ophiuroid taxonomy, the present work provides additional characters for use in future phylogenetic studies.

Isotopic identification of natural vs. anthropogenic lead sources in marine sediments from the inner Ría de Vigo (NW Spain).

PubMed

Álvarez-Iglesias, P; Rubio, B; Millos, J

2012-10-15

San Simón Bay, the inner part of the Ría de Vigo (NW Spain), an area previously identified as highly polluted by Pb, was selected for the application of Pb stable isotope ratios as a fingerprinting tool in subtidal and intertidal sediment cores. Lead isotopic ratios were determined by inductively coupled plasma mass spectrometry on extracts from bulk samples after total acid digestion. Depth-wise profiles of (206)Pb/(207)Pb, (206)Pb/(204)Pb, (207)Pb/(204)Pb, (208)Pb/(204)Pb and (208)Pb/(207)Pb ratios showed, in general, an upward decrease for both intertidal and subtidal sediments as a consequence of the anthropogenic activities over the last century, or centuries. Waste channel samples from a nearby ceramic factory showed characteristic Pb stable isotope ratios different from those typical of coal and petrol. Natural isotope ratios from non-polluted samples were established for the study area, differentiating sediments from granitic or schist-gneiss sources. A binary mixing model employed on the polluted samples allowed estimating the anthropogenic inputs to the bay. These inputs represented between 25 and 98% of Pb inputs in intertidal samples, and 9-84% in subtidal samples, their contributions varying with time. Anthropogenic sources were apportioned according to a three-source model. Coal combustion-related emissions were the main anthropogenic source Pb to the bay (60-70%) before the establishment of the ceramic factory in the area (in the 1970s) which has since constituted the main source (95-100%), followed by petrol-related emissions. The Pb inputs history for the intertidal area was determined for the 20th century, and, for the subtidal area, the 19th and 20th centuries. Copyright © 2012 Elsevier B.V. All rights reserved.

Tidal and residual circulation in a semi-arid bay: Coquimbo Bay, Chile

NASA Astrophysics Data System (ADS)

Valle-Levinson, Arnoldo; Moraga, Julio; Olivares, Jorge; Blanco, José Luis

2000-11-01

Velocity profiles and time-series data were combined with conductivity-temperature-depth (CTD) casts to describe the general circulation at tidal and subtidal scales in a bay of semi-arid climate, Coquimbo Bay (˜30°S), Chile. This was the first study that used a towed acoustic Doppler current profiler (ADCP) in coastal Chilean waters and is one of the very few in semi-arid bays. The ADCP was towed for two semi-diurnal tidal cycles in early austral autumn, between March 23 and 24, 1997 along a triangular trajectory that covered most of the bay. Additional data consisted of moored current meters and CTD casts. The observations indicated the presence of a surface layer, above the pycnocline, that showed predominantly diurnal variability forced by the breeze regime and by tides. The tidal circulation in the surface layer featured amplitudes of 10 cm/s within an anticyclonic gyre that occupied most of the bay. The subtidal circulation in the surface was characterized by a pair of counter-rotating gyres. The northernmost three-fourths of the bay showed an anticyclonic gyre, and the observations over the southern fourth implied a cyclonic gyre. The subtidal anticyclonic gyre had a counterpart rotating in opposite direction within a lower layer, underneath the pycnocline. The lower layer showed semidiurnal variability in addition to diurnal variability and was insulated by the pycnocline from heat and momentum fluxes through the air-water interface. Circulations that resemble estuarine and anti-estuarine patterns were found associated with the subtidal gyres. A horizontal divergence related to a 10 cm/s near-surface outflow around Point Tortuga, to the south of the bay entrance, allowed the development of upward motion off the Point, as evidenced by the tilt of the isopycnals at the entrance to the bay.

Structural impoverishment of the subtidal vegetation of southeastern Bay of Biscay from 1991 to 2013 in the context of climate change

NASA Astrophysics Data System (ADS)

Muguerza, N.; Díez, I.; Quintano, E.; Bustamante, M.; Gorostiaga, J. M.

2017-12-01

This study assesses changes in the taxonomic and functional structure and in the diversity of the shallow (3-9 m) subtidal vegetation off the southeastern coast of the Bay of Biscay by studying 19 locations between 1991 and 2013. Results provide evidence that the three-dimensional assemblages of shallow subtidal bottoms in the study area may be shifting towards less structurally complex communities. Canopy-forming algae are declining whereas simple thallus turfs composed of a combination of filamentous, polysiphonated and foliose non-corticated algae are becoming abundant along with articulated corallines and crustose species. Moreover, a significant increase in taxa richness and diversity was found, mainly due to the development of opportunistic and morphologically simple forms with warm-water affinity. The potential ecological consequences of canopy loss for coastal ecosystems are discussed. Given that changes in climate conditions are predicted to intensify, the prevalence of the new turfing space occupiers in the study area here considered seems to be realistic on the basis of their ability to compete for space and resist disturbance. Consequently, major implications for the functioning and diversity of the ecosystem and for ecosystem services may be expected. bJ. rubens and J. Longifurca. cM. alternans and M. expansum. dP. harveyana and P. squamaria. eP. cartilagineum and P. raphelisianum. fP. ardreana, P. parasitica and P. pennata. gU. dangeardii, U. pseudocurvata and U. rigida.

Environmental factors controlling macrofaunal assemblages on six microtidal beaches of the Ligurian Sea (NW Mediterranean)

NASA Astrophysics Data System (ADS)

Covazzi Harriague, Anabella; Albertelli, Giancarlo

2007-06-01

Six microtidal beaches along the Ligurian coast (NW Mediterranean, Italy) were sampled in order to study their macrofaunal assemblages. All six beaches are subject to heavy tourism in the swimming season and three were subject to nourishment activities during the study period (May 2000). The beaches of Lavagna, Varazze and Pietra Ligure were sampled three times: before the nourishment and the onset of the swimming season (March 2000), after the nourishment (June 2000) and at the end of the swimming season (October 2000). The beaches of Varigotti, Albisola and Loano were sampled twice: before and after the swimming season (March and October 2000, respectively). Sampling was performed along two transects (T1 and T2), about 500 m apart, each transect having three sampling stations: one placed in the swash zone, one in the surf zone and one in the subtidal zone (depth of 3-5 m), in order to verify how far the nourishment material reached. The beaches were characterised by coarse sediments that became finer towards the sub-littoral station. The Beach Deposit Index and Beach Index classified the beaches as reflective (Lavagna, Varazze, Albisola and Varigotti) or intermediate (Pietra Ligure and Loano). Species richness showed a clearly increasing pattern from the swash zone (average 7) to the subtidal zone (average 103). The beach communities were dominated by polychaetes, in particular Saccocirrus papillocercus, which was mainly responsible for the dissimilarity between the beach and subtidal stations. The highest abundance was observed at the surf station (average 118.6 ind. m -2) and the lowest at the subtidal station (average 82.1 ind. m -2). The sediment composition and macrofaunal assemblages were not affected by the beach nourishment. The beach communities responded to different environmental descriptors: species richness seemed to be governed by environmental harshness, while abundance seemed to be linked to the degree of homogeneity of the sediments and the quality of the food supply.

Application of carbonate cyclostratigraphy and borehole geophysics to delineate porosity and preferential flow in the karst limestone of the Biscayne aquifer, SE Florida

USGS Publications Warehouse

Cunningham, K.J.; Renken, R.A.; Wacker, M.A.; Zygnerski, M.R.; Robinson, E.; Shapiro, A.M.; Wingard, G.L.

2006-01-01

Combined analyses of cores, borehole geophysical logs, and cyclostratigraphy produced a new conceptual hydrogeologic framework for the triple-porosity (matrix, touching-vug, and conduit porosity) karst limestone of the Biscayne aquifer in a 0.65 km2 study area, SE Florida. Vertical lithofacies successions, which have recurrent stacking patterns, fit within high-frequency cycles. We define three ideal high-frequency cycles as: (1) upward-shallowing subtidal cycles, (2) upward-shallowing paralic cycles, and (3) aggradational subtidal cycles. Digital optical borehole images, tracers, and flow meters indicate that there is a predictable vertical pattern of porosity and permeability within the three ideal cycles, because the distribution of porosity and permeability is related to lithofacies. Stratiform zones of high permeability commonly occur just above flooding surfaces in the lower part of upward-shallowing subtidal and paralic cycles, forming preferential groundwater flow zones. Aggradational subtidal cycles are either mostly high-permeability zones or leaky, low-permeability units. In the study area, groundwater flow within stratiform high-permeability zones is through a secondary pore system of touching-vug porosity principally related to molds of burrows and pelecypods and to interburrow vugs. Movement of a dye-tracer pulse observed using a borehole fluid-temperature tool during a conservative tracer test indicates heterogeneous permeability. Advective movement of the tracer appears to be most concentrated within a thin stratiform flow zone contained within the lower part of a high-frequency cycle, indicating a distinctly high relative permeability for this zone. Borehole flow-meter measurements corroborate the relatively high permeability of the flow zone. Identification and mapping of such high-permeability flow zones is crucial to conceptualization of karst groundwater flow within a cyclostratigraphic framework. Many karst aquifers are included in cyclic platform carbonates. Clearly, a cyclostratigraphic approach that translates carbonate aquifer heterogeneity into a consistent framework of correlative units will improve simulation of karst groundwater flow. ?? 2006 Geological Society of America.

DOE Office of Scientific and Technical Information (OSTI.GOV)

O`Clair, C.E.; Short, J.W.; Rice, S.D.

Sediments were collected at ten locations in Prince William Sound in July 1993 to determine the geographical and bathymetric distribution of oil from the Exxon Valdez oil spill in the low intertidal zone and subtidal region. The authors sampled sediments at mean lower low water (0 m) and at five subtidal depths from 3 to 100 m. No Exxon Valdez oil was found in sediments at 0 m where the greatest mean intertidal concentration of total polynuclear aromatic hydrocarbons excluding perylene (54 ng/g) was observed at Moose Lips Bay. Subtidal sediments showed polynuclear aromatic hydrocarbon composition patterns similar to Exxonmore » Valdez oil at three sites, Herring Bay, Northwest Bay and Sleepy Bay. Contamination of sediments by Exxon Valdez oil reached a depth of 20 m at Northwest Bay and Sleepy Bay. In deep sediments (> or = 40 m) the authors found no evidence of weathered Exxon Valdez oil.« less

Nursery function of coastal temperate benthic habitats: New insight from the bivalve recruitment perspective

NASA Astrophysics Data System (ADS)

Barbier, Pierrick; Meziane, Tarik; Forêt, Martin; Tremblay, Réjean; Robert, René; Olivier, Frédéric

2017-03-01

Marine habitat function has been typically investigated in terms of biogeochemical regulation but rarely in terms of population renewal, which is mainly controlled by recruitment dynamics. The recruitment phase is crucial for organisms with a bentho-pelagic life cycle, such as bivalves, and it regulates the population renewal success. This study provides new insight on the role of temperate benthic habitats on bivalve recruitment, as a function of nursery areas. Six dominant benthic habitats of the Chausey archipelago (Normandy, France) were studied. In each habitat, bivalve recruit assemblages were described at the end of two reproductive seasons. Furthermore, Ostrea edulis juveniles were immerged on each habitat during two months to compare growth performances and feeding status, estimated by fatty acid composition. Recruit assemblages differ from each habitat according to sediment grain-size composition and bathymetrical levels. Subtidal habitats, and especially Crepidula fornicata banks and Glycymeris glycymeris coarse sands, supported the highest species abundance and richness of recruits. All O. edulis juveniles fed on the same trophic resources but digestive glands of juveniles from C. fornicata banks were more concentrated in total fatty acids than those from subtidal G. glycymeris coarse sands and maerl banks. Our results depict the key role of subtidal and structured habitats, composed of ecosystem engineers, in enhancing bivalve recruitment and extending the bivalve population renewal. This study suggests that the crucial role of these habitats as bivalve nurseries must be integrated in management perspectives. 2-column fitting image. 1-column fitting image.

Coastal lithofacies and biofacies associated with syndepositional dolomitization and silicification (Draken Formation, Upper Riphean, Svalbard).

PubMed

Fairchild, I J; Knoll, A H; Swett, K

1991-01-01

The Draken Formation (120-250 m) of northeast Spitsbergen (Svalbard) forms part of a thick Upper Proterozoic carbonate platform succession. It consists predominantly of intraformational dolomitic conglomerates, with excellent textural preservation. Six main lithofacies were recognized in the field: quartz sandstones, stromatolitic mats, conglomerates with silicified intraclasts, dolostone conglomerates with desiccated mudrocks, oolitic/pisolitic grainstones and fenestral dolostones. A series of five main gradational biofacies were recognized from silicified (and rare calcified) microfossils. Biofacies 1 represents low-energy subtidal benthos (erect filaments) and plankton (acritarchs and vase-shaped microfossils) whereas biofacies 2 to 5 are microbial mat assemblages (with filamentous mat-builders, and associated dwellers and washed-in plankton) ranging from basal intertidal to high intertidal/supratidal. Colour values (a measure of the lightness of the colour shade) of sawn rock samples were quantified using a Munsell chart, and exhibit a pronounced variation (means of major groups varying from 4.0 to 5.95) across the spectrum of subtidal to supratidal sediments as inferred from other criteria. The lightening in progressively more exposed sediments is related to lowering of organic carbon contents, probably mainly by oxidation. Six types of early cement have been recognized. Calcite microspar (type 1) is common as a subtidal cement in many Proterozoic formations, whereas types 2 (subtidal isopachous fringes), 3 (subtidal hardground dolomicrite) and 4 (intertidal meniscus dolomicrite) are very similar to Phanerozoic examples except for their dolomitic mineralogy. Types 5 and 6 are complex and variable dolomite growths associated with expansion and replacive phenomena. They characterize the fenestral lithofacies and compare with modern supratidal cements. Consideration of diagenetic fabrics and truncation textures of intraclasts indicates that leaching, dolomitization, silicification were all significant syndepositional processes altering the original metastable carbonates. The data set provides evidence for a spectrum of peritidal environments including ooid shoals, protected subtidal, tidal sandflats and protected carbonate mudflats. Different sections show a preponderance of particular facies. The coastal lithofacies continuum was completely dolomitized, unlike offshore to ooid shoal facies of adjacent formations. Dolomitization thus bears a relationship to depositional bathymetry. Although hydrodynamics clearly have a role, the potential importance of whiting precipitation in raising Mg/Ca in marginal marine environments is also stressed.

Coastal lithofacies and biofacies associated with syndepositional dolomitization and silicification (Draken Formation, Upper Riphean, Svalbard)

NASA Technical Reports Server (NTRS)

Fairchild, I. J.; Knoll, A. H.; Swett, K.

1991-01-01

The Draken Formation (120-250 m) of northeast Spitsbergen (Svalbard) forms part of a thick Upper Proterozoic carbonate platform succession. It consists predominantly of intraformational dolomitic conglomerates, with excellent textural preservation. Six main lithofacies were recognized in the field: quartz sandstones, stromatolitic mats, conglomerates with silicified intraclasts, dolostone conglomerates with desiccated mudrocks, oolitic/pisolitic grainstones and fenestral dolostones. A series of five main gradational biofacies were recognized from silicified (and rare calcified) microfossils. Biofacies 1 represents low-energy subtidal benthos (erect filaments) and plankton (acritarchs and vase-shaped microfossils) whereas biofacies 2 to 5 are microbial mat assemblages (with filamentous mat-builders, and associated dwellers and washed-in plankton) ranging from basal intertidal to high intertidal/supratidal. Colour values (a measure of the lightness of the colour shade) of sawn rock samples were quantified using a Munsell chart, and exhibit a pronounced variation (means of major groups varying from 4.0 to 5.95) across the spectrum of subtidal to supratidal sediments as inferred from other criteria. The lightening in progressively more exposed sediments is related to lowering of organic carbon contents, probably mainly by oxidation. Six types of early cement have been recognized. Calcite microspar (type 1) is common as a subtidal cement in many Proterozoic formations, whereas types 2 (subtidal isopachous fringes), 3 (subtidal hardground dolomicrite) and 4 (intertidal meniscus dolomicrite) are very similar to Phanerozoic examples except for their dolomitic mineralogy. Types 5 and 6 are complex and variable dolomite growths associated with expansion and replacive phenomena. They characterize the fenestral lithofacies and compare with modern supratidal cements. Consideration of diagenetic fabrics and truncation textures of intraclasts indicates that leaching, dolomitization, silicification were all significant syndepositional processes altering the original metastable carbonates. The data set provides evidence for a spectrum of peritidal environments including ooid shoals, protected subtidal, tidal sandflats and protected carbonate mudflats. Different sections show a preponderance of particular facies. The coastal lithofacies continuum was completely dolomitized, unlike offshore to ooid shoal facies of adjacent formations. Dolomitization thus bears a relationship to depositional bathymetry. Although hydrodynamics clearly have a role, the potential importance of whiting precipitation in raising Mg/Ca in marginal marine environments is also stressed.

Grazer removal and nutrient enrichment as recovery enhancers for overexploited rocky subtidal habitats.

PubMed

Guarnieri, Giuseppe; Bevilacqua, Stanislao; Vignes, Fabio; Fraschetti, Simonetta

2014-07-01

Increasing anthropogenic pressures are causing long-lasting regime shifts from high-diversity ecosystems to low-diversity degraded ones. Understanding the effects of multiple threats on ecosystems, and identifying processes allowing for the recovery of biodiversity, are the current major challenges in ecology. In several temperate marine areas, large parts of rocky subtidal habitats characterised by high diversity have been completely degraded to barren grounds by overfishing, including illegal date mussel fishing. Bare areas are characterized by the dominance of sea urchins whose grazing perpetuates the impact of overfishing. We investigated experimentally the separate and combined effects of nutrient enrichment and sea urchin exclusion on the recovery of barren grounds. Our results indicate that the two factors have a synergistic effect leading to the re-establishment of erect macroalgal canopies, enhancing the structural complexity of subtidal assemblages. In particular, in the overfished system considered here, the recovery of disturbed assemblages could occur only if sea urchins are removed. However, the recolonization of barren grounds by erect macroalgae is further enhanced under enriched conditions. This study demonstrates that the recovery of dramatically depleted marine habitats is possible, and provides useful indications for specific management actions, which at present are totally lacking, to achieve the restoration of barren grounds caused by human activity.

Biogeography of Nearshore Subtidal Invertebrates in the Gulf of Maine

EPA Science Inventory

The biogeography of nearshore benthic invertebrates in the Gulf of Maine was studied to compare recent data with historical biogeographic studies, define physical-chemical factors affecting species distributions, and provide information needed to calibrate benthic indices of envi...

Species composition, richness, and distribution of marine bivalve molluscs in Bahía de Mazatlán, México

PubMed Central

Esqueda-González, María del Carmen; Ríos-Jara, Eduardo; Galván-Villa, Cristian Moises; Rodríguez-Zaragoza, Fabian Alejandro

2014-01-01

Abstract We describe the composition and distribution of bivalve molluscs from the sandy and rocky intertidal and the shallow subtidal environments of Bahía de Mazatlán, México. The bivalve fauna of the bay is represented by 89 living species in 28 families, including 37 new records and four range extensions: Lithophaga hastasia, Adula soleniformis, Mactrellona subalata, and Strigilla ervilia. The number of species increases from the upper (44) and lower intertidal (53) to the shallow subtidal (76), but only 11 (17%) have a wide distribution in the bay (i.e., found in all sampling sites and environments). The bivalve assemblages are composed of four main life forms: 27 epifaunal species, 26 infaunal, 16 semi-infaunal, and 20 endolithic. A taxonomic distinctness analysis identified the sampling sites and environments that contribute the most to the taxonomic diversity (species to suborder categories) of the bay. The present work increased significantly (31%) to 132 species previous inventories of bivalves of Bahía de Mazatlán. These species represent 34% of the bivalve diversity of the southern Golfo de California and approximately 15% of the Eastern Tropical Pacific region. PMID:24843252

Environmental quality of Korean coasts as determined by modified Shannon-Wiener evenness proportion.

PubMed

Yoo, Jae-Won; Lee, Yong-Woo; Ruesink, Jennifer L; Lee, Chang-Gun; Kim, Chang-Soo; Park, Mi-Ra; Yoon, Kon-Tak; Hwang, In-Seo; Maeng, Jun-Ho; Rosenberg, Rutger; Hong, Jae-Sang

2010-11-01

The coast of the Korean peninsula experiences a range of human impacts, including pollution, shipping, reclamation, and aquaculture, that have motivated numerous local studies of macrobenthic organisms. In this paper, 1,492 subtidal stations were compiled from 23 studies (areas) to evaluate environmental quality on a broader scale. A common index in biomonitoring, Shannon-Wiener evenness proportion (SEP), could not incorporate azoic or single-species samples. This shortcoming was overcome by developing an inverse function of SEP (ISEP), which was positively correlated with independent measures of water quality available for nine sites and was not biased by the size of the sampling unit. Additionally, at Shihwa Dike, where samples were collected before and after reinstating a tidal connection with the ocean, ISEP values improved over time, as expected. Thus, it is now possible to assign Korean subtidal sites to seven ISEP "grades" and to use their values and trends to guide coastal management.

The role of ecological divergence in speciation between intertidal and subtidal Scoloplos armiger (Polychaeta, Orbiniidae)

NASA Astrophysics Data System (ADS)

Kruse, Inken; Strasser, Matthias; Thiermann, Frank

2004-02-01

The concept of ecological speciation implies that habitat differences may split a species by strong selection and rapid adaptation even under sympatric conditions. Studies on the polychaete Scoloplos armiger in the Wadden Sea (North Sea) indicate sibling species existing in sympatry: the intertidal 'Type I' with holobenthic development out of egg cocoons and the subtidal 'Type S' producing pelagic larvae. In the current study, Types I and S are compared in habitat-related traits of reproductive timing and physiological response to hypoxia and sulphide. Spawnings of Type I and Type S recorded over six years overlap in spring and both appear to be triggered by a rise in seawater temperature above 5 °C. Type S exhibits an additional autumn spawning (at seawater temperatures around 10 °C) which was previously unknown and is absent in Type I. The overall abundance of pelagic larvae in the Wadden Sea is higher in spring than in autumn. Tolerance of both sulphide and hypoxia was lower in Type S than in Type I. This correlates with a 5 to 10-fold lower sulphide concentration in the subtidal compared to the intertidal habitat. Physiological tolerance and divergence in developmental mode appear as traits which may have led to reproductive isolation between Type I and Type S. Their role in allopatric and sympatric speciation scenarios in S. armiger is discussed. Since the pelagic dispersal mode has been neglected so far, a reassessment of population dynamics models for S. armiger is suggested.

The relative significance of biological and physical disturbance: an example from intertidal and subtidal sandy bottom communities

NASA Astrophysics Data System (ADS)

Brey, Thomas

1991-10-01

The effects of biological disturbance caused by the lugworm Arenicola marina (L.) on the abundance of the macrobenthic fauna were investigated at three subtidal stations (0·5 m, 12 m and 19 m water depth) in Kiel Bay (western Baltic) and on an intertidal flat in the German Wadden Sea. Different effects of biological disturbance were observed (1) between funnel and cast of the lugworm burrow, (2) among stations, (3) between seasons, and (4) among taxa and groups of different living mode of the macrofauna. The strength of the impact of A. marina on the abundance of a certain macrobenthic species depends on three factors: (1) species behaviour and living mode, (2) A. marina activity, and (3) hydrodynamic conditions. In general, the most distinct effects were observed at the intertidal station during summer, followed by the two deeper subtidal stations. At the very shallow station, only weak effects were detected.

Improvement of operational prediction system applied to the oil spill prediction in the Yellow Sea

NASA Astrophysics Data System (ADS)

Kim, C.; Cho, Y.; Choi, B.; Jung, K.

2012-12-01

Multi-nested operational prediction system for the Yellow Sea (YS) has been developed to predict the movement of oil spill. Drifter trajectory simulations were performed to predict the path of the oil spill of the MV Hebei Spirit accident occurred on 7 December 2007. The oil spill trajectories at the surface predicted by numerical model without tidal forcing were remarkably faster than the observation. However the speed of drifters predicted by model considering tide was satisfactorily improved not only for the motion with tidal cycle but also for the motion with subtidal period. The subtidal flow of the simulation with tide was weaker than that without tide due to tidal stress. Tidal stress decelerated the southward subtidal flows driven by northwesterly wind along the Korean coast of the YS in winter. This result provides a substantial implication that tide must be included for accurate prediction of oil spill trajectory not only for variation within a tidal cycle but also for longer time scale advection in tide dominant area.

Discontinuity surfaces in the Lower Cretaceous of the high Andes (Mendoza, Argentina): Trace fossils and environmental implications

NASA Astrophysics Data System (ADS)

Mangano, M. G.; Buatois, L. A.

The paleoecologic and paleoenvironmental significance of trace fossils related to discontinuity surfaces in the Lower Cretaceous marine deposits of the Aconcagua area are analysed here. Carbonate-evaporite shoaling-upward cycles, developed by high organic production in a shallow hypersaline restricted environment, make up the section. Two types of cycles are defined, being mainly distinguished by their subtidal unit. Cycle I begins with a highly dolomitized lower subtidal unit (Facies A), followed upward by an intensely bioturbated upper subtidal unit (Facies B). The nodular packstone facies (B 1) is capped by a discontinuity surface (firmground or hardground) and occasionally overlain by an oystreid bed (Facies C). Cycle II is characterized by a pelletoidal subtidal unit (Facies B 2) with an abnormal salinity impoverished fauna. Both cycles end with intertidal to supratidal evaporite deposits (Facies D and E, respectively). Attention is particularly focused on cycle I due to its ichologic content. The mode of preservation and the distribution of trace fossils in nodular packstone facies are controlled by original substrate consolidation. Thalassinoides paradoxicus (pre-omission suite) represents colonization in a soft bottom, while Thalassinoides suevicus (omission suite pre-lithification) is apparently restricted to firm substrates. When consolidation processes are interrupted early, only an embryonic hard-ground that represents a minor halt in sedimentation was developed. Sometimes, consolidation processes continued leading to an intraformational hardground. Colonization by Trypanites solitarius (omission suite post-lithification) and Exogyra-like oystreids possibly characterizes hard substrate stage. When two discontinuity surfaces follow closely, a post-omission suite may be defined in relation to the lower cemented surface. As trace fossils are so closely related to changes in the degree of bottom lithification, they prove to be very useful as indicators of substrate evolution. The presence of discontinuity surfaces, evidenced by trace fossil association, suggests changes of sedimentary rate and environmental conditions that should be taken into account in future studies seeking to erect depositional models for these Cretaceous deposits.

Genetic characterization of Zostera asiatica on the Pacific Coast of North America

USGS Publications Warehouse

Talbot, S.L.; Wyllie-Echeverria, S.; Ward, D.H.; Rearick, J.R.; Sage, G.K.; Chesney, B.; Phillips, R.C.

2006-01-01

We gathered sequence information from the nuclear 5.8S rDNA gene and associated internal transcribed spacers, ITS-1 and ITS-2 (5.8S rDNA/ITS), and the chloroplast maturase K (matK) gene, from Zostera samples collected from subtidal habitats in Monterey and Santa Barbara (Isla Vista) bays, California, to test the hypothesis that these plants are conspecific with Z. asiatica Miki of Asia. Sequences from approximately 520 base pairs of the nuclear 5.8S rDNA/ITS obtained from the subtidal Monterey and Isla Vista Zostera samples were identical to homologous sequences obtained from Z. marina collected from intertidal habitats in Japan, Alaska, Oregon and California. Similarly, sequences from the matK gene from the subtidal Zostera samples were identical to matK sequences obtained from Z. marina collected from intertidal habitats in Japan, Alaska, Oregon and California, but differed from Z. asiatica sequences accessioned into GenBank. This suggests the subtidal plants are conspecific with Z. marina, not Z. asiatica. However, we found that herbarium samples accessioned into the Kyoto University Herbarium, determined to be Z. asiatica, yielded 5.8S rDNA/ITS sequences consistent with either Z. japonica, in two cases, or Z. marina, in one case. Similar results were observed for the chloroplast matK gene; we found haplotypes that were inconsistent with published matK sequences from Z. asiatica collected from Japan. These results underscore the need for closer examination of the relationship between Z. marina along the Pacific Coast of North America, and Z. asiatica of Asia, for the retention and verification of specimens examined in scientific studies, and for assessment of the usefulness of morphological characters in the determination of taxonomic relationships within Zosteraceae.

The Effect of Barotropic and Baroclinic Tides on Coastal Stratification and Mixing

NASA Astrophysics Data System (ADS)

Suanda, S. H.; Feddersen, F.; Kumar, N.

2017-12-01

The effects of barotropic and baroclinic tides on subtidal stratification and vertical mixing are examined with high-resolution, three-dimensional numerical simulations of the Central Californian coastal upwelling region. A base simulation with realistic atmospheric and regional-scale boundary forcing but no tides (NT) is compared to two simulations with the addition of predominantly barotropic local tides (LT) and with combined barotropic and remotely generated, baroclinic tides (WT) with ≈ 100 W m-1 onshore baroclinic energy flux. During a 10 day period of coastal upwelling when the domain volume-averaged temperature is similar in all three simulations, LT has little difference in subtidal temperature and stratification compared to NT. In contrast, the addition of remote baroclinic tides (WT) reduces the subtidal continental shelf stratification up to 50% relative to NT. Idealized simulations to isolate barotropic and baroclinic effects demonstrate that within a parameter space of typical U.S. West Coast continental shelf slopes, barotropic tidal currents, incident energy flux, and subtidal stratification, the dissipating baroclinic tide destroys stratification an order of magnitude faster than barotropic tides. In WT, the modeled vertical temperature diffusivity at the top (base) of the bottom (surface) boundary layer is increased up to 20 times relative to NT. Therefore, the width of the inner-shelf (region of surface and bottom boundary layer overlap) is increased approximately 4 times relative to NT. The change in stratification due to dissipating baroclinic tides is comparable to the magnitude of the observed seasonal cycle of stratification.

Permian depositional history, Leach Mountains, northeastern Nevada

DOE Office of Scientific and Technical Information (OSTI.GOV)

Martindale, S.G.

1993-04-01

The 4,000 m thick Permian sequence in the Leach Mountains consists of carbonate rock, chert, terrigenous clastic rock and phosphatic rock. These rocks, in ascending order, comprise the Third Fork Fm., Badger Gulch Fm., Trapper Creek Fm., Grandeur Fm., Meade Peak Phosphatic Shale Tongue of the Phosphoria Fm., Murdock Mountain Fm. and Gerster Limestone. This sequence disconformably overlain by Triassic strata. Initial Permian deposition, represented by the late Wolfcampian to early Leonardian Third Fork Fm., was on a slope, at a water depth of about 50 m. Subsequently, a shallowing trend occurred during the early Leonardian to late Leonardian withmore » deposition of the Badger Gulch, Trapper Creek and Grandeur Fms. The Trapper Creek and Grandeur Fms. were deposited on the shelf, in very shallow subtidal to supratidal environments. The shelf persisted through the remainder of the Permian. In the late leonardian, the Meade Peak Tongue was deposited in very shallow subtidal and intertidal environments. A supratidal environment was re-established in latest Leonardian( ) to early Guadalupian with deposition of the lower Murdock Mountain Fm. The upper Murdock Mountain Fm. was deposited in very shallow subtidal to supratidal environments. Later during the early Guadalupian, intertidal to shallow subtidal deposition of the Gerster Limestone occurred. Angular phosphatic pebbles that were derived from phosphatic strata at the top of the Gerster Limestone are contained in the Triassic basal conglomerate. These pebbles indicate that the last Permian event was probably emergence and erosion of the top of the Gerster Limestone.« less

Tidal and subtidal exchange flows at an inlet of the Wadden Sea

NASA Astrophysics Data System (ADS)

Valle-Levinson, Arnoldo; Stanev, Emil; Badewien, Thomas H.

2018-03-01

Observations of underway velocity profiles during complete spring and neap tidal cycles were used to determine whether the spatial structures of tidal and subtidal flows at a tidal inlet in a multiple-inlet embayment are consistent with those observed at single-inlet embayments. Measurements were obtained at the Otzumer Balje, one of the multiple inlets among the East Frisian Islands of the Wadden Sea. The 1.5 km-wide inlet displayed a bathymetric profile consisting of a channel ∼15 m deep flanked by <5 m shoals. Neap tide observations spanned 36 h in the period May 11-12, 2011, while spring tide measurements exceeded 48 h from May 17 to May 19, 2011. Analysis of observations indicate that frictional effects from bathymetry molded tidal flows. Spatial distributions of semidiurnal tidal current amplitude and phase conform to those predicted by an analytical model for a basin with one inlet. Maximum semidiurnal flows appear at the surface in the channel, furthest away from bottom friction effects. Therefore, Otzumer Balje displays tidal hydrodynamics that are independent of the other inlets of the embayment. Subtidal exchange flows are laterally sheared, with residual inflow in the channel combined with outflow over shoals. The spatial distribution of these residual flows follow theoretical expectations of tidally driven flows interacting with bathymetry. Such distribution is similar to the tidal residual circulation at other inlets with only one communication to the ocean, suggesting that at subtidal scales the Otzumer Balje responds to tidal forcing independently of the other inlets.

[Fish community structure and its seasonal change in subtidal sandy beach habitat off southern Gouqi Island].

PubMed

Wang, Zhen-Hua; Wang, Kai; Zhao, Jing; Zhang, Shou-Yu

2011-05-01

To understand the characteristics of fish community structure in sandy beach habitats of island reef water areas, and to evaluate the potential capacity of these habitats in local fish stock maintenance, fishes were monthly collected with multi-mesh trammel nets in 2009 from the subtidal sandy beach habitat off southern Gouqi Island, taking the adjacent rocky reef habitat as the control. alpha and beta species diversity indices, index of relative importance (IRI), relative catch rate, and dominance curve for abundance and biomass (ABC curve) were adopted to compare the fish species composition, diversity, and community pattern between the two habitats, and multivariate statistical analyses such as non-metric multidimensional scaling (nMDS) and cluster were conducted to discuss the fish assemblage patterns. A total of 63 fish species belonging to 11 orders, 38 families, and 56 genera were collected, of which, 46 fish species were appeared in the two habitats. Due to the appearance of more warm water species in sandy bottom, the fishes in subtidal sandy beach habitat showed much higher richness, and the abundance catch rate (ACR) from May to July was higher than that in rocky reef habitat. In most rest months, the ACR in subtidal sandy beach habitat also showed the similar trend. However, the species richness and diversity in spring and summer were significantly lower in subtidal sandy beach habitat than in rocky reef habitat, because of the high species dominance and low evenness in the sandy beach habitat. Japanese tonguefish (Paraplagusia japonica) was the indicator species in the sandy beach habitat, and dominated in early spring, later summer, autumn, and winter when the fishing pressure was not strong. In sandy bottom, a unique community structure was formed and kept in dynamic, due to the nursery use of sandy beach by Japanese anchovy (Engraulis japonicus) from May to July, the gathering of gray mullet (Mugil cephalus) in most months for feeding, and the large quantity appearance of plotosid catfish (Plotosus anguillaris) in early Autumn, which was quite different from the community structure pattern dominated by reef fishes in rocky-algae habitat. The subtidal sandy bottom off Gouqi Island was serving as both nursery and feeding grounds for many fish species, being a suitable habitat for flatfishes. It was concluded that the sandy beaches around Gouqi Island could be a very important habitat for economic fish species, especially as a nursery ground for juvenile fishes, contributing to the fish stock maintenance in specific area.

Effects of air-exposure gradients on spatial infection patterns of Perkinsus marinus in the eastern oyster Crassostrea virginica.

PubMed

Malek, Jennafer C; Breitburg, Denise L

2016-02-25

Spatial distributions of species can be shaped by factors such as parasites, mortality, and reproduction, all of which may be influenced by differences in physical factors along environmental gradients. In nearshore tidal waters, an elevational gradient in aerial exposure during low tide can shape the spatial distributions of benthic marine organisms. The eastern oyster Crassostrea virginica is an ecologically and economically important species that can dominate both subtidal and intertidal habitats along the east coast of the USA. Our goal was to determine whether prevalence and intensity of Perkinsus marinus (the causative agent of Dermo disease) infections vary along intertidal to subtidal gradients during summer. We used (1) field experiments conducted at 4 sites in the Chesapeake Bay and a Virginia coastal bay, (2) a controlled air-exposure experiment, and (3) field surveys from 7 sites ranging from Maine to North Carolina to test for effects of tidal exposure on infection. Results from our field surveys suggested that high intertidal oysters tend to have higher infection prevalence than subtidal oysters, but there was no effect on infection intensity. Field experiments rarely yielded significant effects of tidal exposure on infection prevalence and intensity. Overall, our study shows that exposure to air may not be a strong driver of infection patterns in this host-parasite system.

Recolonization of the intertidal and shallow subtidal community following the 2008 eruption of Alaska’s Kasatochi Volcano

USGS Publications Warehouse

Jewett, S.C.; Drew, Gary S.

2014-01-01

The intertidal and nearshore benthic communities of Kasatochi Island are described following a catastrophic volcanic eruption in 2008. Prior to the eruption, the island was surrounded by a dense bed of canopy-forming dragon kelp Eualaria fistulosa which supported a productive nearshore community. The eruption extended the coastline of the island approximately 400 m offshore to roughly the 20 m isobath. One year following the eruption a reconnaissance survey found the intertidal zone devoid of life. Subtidally, the canopy kelp, as well as limited understory algal species and associated benthic fauna on the hard substratum, were buried by debris from the eruption. The resulting substrate was comprised almost entirely of medium and coarse sands with a depauperate benthic community. Comparisons of habitat and biological communities with other nearby Aleutian Islands and the Icelandic submarine volcanic eruption of Surtsey confirm dramatic reductions in flora and fauna consistent with the initial stages of recovery from a large-scale disturbance event. Four and five years following the eruption brief visits revealed dramatic intertidal and subtidal recolonization of the flora and fauna in some areas. Signs of nesting and fledging of young pigeon guillemots Cepphus columba suggest that the recovery of the nearshore biota may have begun affecting higher trophic levels. Recolonization or lack thereof was tied to bathymetric changes from coastal and nearshore erosion over the study period.

Recolonization of the intertidal and shallow subtidal community following the 2008 eruption of Alaska's Kasatochi Volcano

NASA Astrophysics Data System (ADS)

Jewett, S. C.; Drew, G. S.

2014-03-01

The intertidal and nearshore benthic communities of Kasatochi Island are described following a catastrophic volcanic eruption in 2008. Prior to the eruption, the island was surrounded by a dense bed of canopy-forming dragon kelp Eualaria fistulosa which supported a productive nearshore community. The eruption extended the coastline of the island approximately 400 m offshore to roughly the 20 m isobath. One year following the eruption a reconnaissance survey found the intertidal zone devoid of life. Subtidally, the canopy kelp, as well as limited understory algal species and associated benthic fauna on the hard substratum, were buried by debris from the eruption. The resulting substrate was comprised almost entirely of medium and coarse sands with a depauperate benthic community. Comparisons of habitat and biological communities with other nearby Aleutian Islands and the Icelandic submarine volcanic eruption of Surtsey confirm dramatic reductions in flora and fauna consistent with the initial stages of recovery from a large-scale disturbance event. Four and five years following the eruption brief visits revealed dramatic intertidal and subtidal recolonization of the flora and fauna in some areas. Signs of nesting and fledging of young pigeon guillemots Cepphus columba suggest that the recovery of the nearshore biota may have begun affecting higher trophic levels. Recolonization or lack thereof was tied to bathymetric changes from coastal and nearshore erosion over the study period.

Zonation and structuring factors of meiofauna communities in a tropical seagrass bed (Gazi Bay, Kenya)

NASA Astrophysics Data System (ADS)

De Troch, Marleen; Gurdebeke, Shirley; Fiers, Frank; Vincx, Magda

2001-02-01

This study deals with the relation between tropical meiofauna and environmental variables by comparing the 'benthic' (i.e. in the bare sediment adjacent to seagrass plants) and the 'epiphytic' (i.e. in samples including seagrass plants) meiofauna associated with five seagrass species from the high intertidal to the high subtidal zone in Gazi Bay (Kenya). Ordination and variance analysis revealed three distinct 'benthic' and two 'epiphytic' meiofauna assemblages. These assemblages corresponded entirely with those identified for the seagrass species: a high intertidal pioneer association ( Halophila ovalis/ Halodule wrightii), an intertidal climax assemblage ( Thalassia hemprichii) and a high subtidal pioneer association ( Halophila stipulacea/ Syringodium isoetifolium). These data support the hypothesis that meiofaunal communities correspond to the characteristic zonation of the seagrass vegetation in Gazi Bay. In beds of the pioneer seagrass species, the close relationship between sediment characteristics and both 'benthic' and 'epiphytic' meiofauna communities suggests that these pioneer communities were mainly driven by physical factors. The 'benthic' communities adjacent to the climax seagrass species T. hemprichii were more structured by biogenic factors, e.g. % TOM, chlorophyll a and c, fucoxanthin, habitat complexity and growth form of the seagrass species. For its associated 'epiphytic' meiofauna the latter conclusion was even more striking. These data corroborate the importance of physical factors in disturbed environments (intertidal zone, near pioneer seagrasses) and of biotic factors in more stable conditions (subtidal zone, near climax seagrasses).

Upper Cretaceous ramp limestones from the Sorrento Peninsula (southern Apennines, Italy): micro- and macrofossil associations and their significance in the depositional sequences

NASA Astrophysics Data System (ADS)

Carannante, G.; Ruberti, D.; Sirna, M.

2000-04-01

The Upper Cretaceous limestones of the Sorrento Peninsula are primarily characterized by wackestone/packstone with benthic foraminifers, thaumatoporellaceans and Aeolisaccus sp. and by rudist floatstones. Rudists in growth position are rare; most of them appear toppled and locally oriented but not reworked. In some cases they form small bouquets no more than 30 cm thick. The successions analyzed in the Sorrento Peninsula encompass a variety of facies representative of inner shelf environments in a ramp-like depositional setting. On the basis of lithologic and sedimentologic characteristics and on a qualitative analysis of the biofacies, three major facies associations have been recognized corresponding to: (a) intertidal silty-sand flats and shallow lagoons; (b) subtidal mobile foraminiferal sand sheets; (c) subtidal rudist dwelt sand plain. In the lower part of the successions periodic (more or less prolonged) emersions (subaqueous with fresh/brackish waters or subaerial exposure) are documented. The upper part of each succession lacks any emersion evidence; submarine exposure surfaces are testified by firmground-related features. The periodic influence of high-energy regimes (some storm-related events) is documented by wave- and cross-laminations, HCS and the lack of fine sediments. Lithofacies are arranged in depositional cycles that may correspond to individual beds. The boundaries of the depositional cycles show evidence of subaerial or submarine exposures. The nature and position of these discontinuity surfaces in the successions provide an important clue to interpretation in terms of both depositional environment and vertical evolution. The increase in thickness of the depositional cycles and the gradual change from peritidal/shallow-subtidal cycles to dominantly subtidal cycles, document an increase in the amount of accommodation space which resulted from a long-term rise in relative sea-level. A detailed study of benthic associations (micro- and macrofauna) has been carried out in order to identify accurately further signs of periodicity contained within the successions as a whole. These Upper Cretaceous limestones are abundantly fossiliferous with only a moderately diverse fauna. There are no significant differences in terms of species, the assemblages simply reflecting differences in abundance of the same species. Taphonomic studies of rudist-rich beds permit seven major shell-bed types to be distinguished. Six main foraminiferal assemblages have been detected, and the distribution and relative abundance of the species have been examined within the environments inferred through facies analysis. The taphonomic data and the foraminiferal assemblage abundance and diversity, have been compared with lithologic and sedimentologic data in order to elucidate their distribution within depositional cycles and throughout the successions. The successions show little up-section changes in lithology and in taxonomic composition of the foraminiferal assemblages. It is therefore difficult to establish a paleoenvironmental trend independent of the rudist shell concentrations, which do change up-section. We noticed an overall increase in thickness and abundance of the shell beds and a shift in types of shell concentration and in taxonomic composition. These characteristics, associated with the upward disappearance of emersion surfaces, the higher frequency of storm and/or wave intercalations, the increase in thickness of the depositional sequences and the gradual change from peritidal/shallow-subtidal cycles to dominantly subtidal cycles, document a general deepening-upward trend. More open water conditions with a depth between fairweather and storm wave-base became established as a result of relative sea-level rise and to a consequent increase in the available accommodation space.

A FIELD VALIDATION OF TWO SEDIMENT-AMPHIPOD TOXICITY TESTS

EPA Science Inventory

A field validation study of two sediment-amphipod toxicity tests was conducted using sediment samples collected subtidally in the vicinity of a polycyclic aromatic hydrocarbon (PAH)-contaminated Superfund site in Elliott Bay, WA, USA. Sediment samples were collected at 30 stati...

Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands.

PubMed

Böer, Simone I; Hedtkamp, Stefanie I C; van Beusekom, Justus E E; Fuhrman, Jed A; Boetius, Antje; Ramette, Alban

2009-07-01

Bacterial community structure and microbial activity were determined together with a large number of contextual environmental parameters over 2 years in subtidal sands of the German Wadden Sea in order to identify the main factors shaping microbial community structure and activity in this habitat. Seasonal changes in temperature were directly reflected in bacterial activities and total community respiration, but could not explain variations in the community structure. Strong sediment depth-related patterns were observed for bacterial abundances, carbon production rates and extracellular enzymatic activities. Bacterial community structure also showed a clear vertical variation with higher operational taxonomic unit (OTU) numbers at 10-15 cm depth than in the top 10 cm, probably because of the decreasing disturbance by hydrodynamic forces with sediment depth. The depth-related variations in bacterial community structure could be attributed to vertical changes in bacterial abundances, chlorophyll a and NO(3)(-), indicating that spatial patterns of microbes are partially environmentally controlled. Time was the most important single factor affecting microbial community structure with an OTU replacement of up to 47% over 2 years and a contribution of 34% to the total variation. A large part of this variation was not related to any environmental parameters, suggesting that temporal variations in bacterial community structure are caused by yet unknown environmental drivers and/or by stochastic events in coastal sand habitats. Principal ecosystem functions such as benthic oxygen consumption and extracellular hydrolysis of organic matter were, however, at a high level at all times, indicating functional redundancy in the microbial communities.

Changes in subtidal assemblages in a scenario of warming: proliferations of ephemeral benthic algae in the Canary Islands (eastern Atlantic Ocean).

PubMed

Sangil, Carlos; Sansón, Marta; Afonso-Carrillo, Julio; Herrera, Rogelio; Rodríguez, Adriana; Martín-García, Laura; Díaz-Villa, Tania

2012-06-01

The present work analysed the main changes in subtidal algal assemblages in the last decade in an oceanic archipelago (Canary Islands--eastern Atlantic Ocean). Changes result from increases in cover of ephemeral benthic algae, such as the non-native chlorophyte Pseudotetraspora marina and the native cyanophytes Blennothrix lyngbyacea, Schizothrix calcicola and Schizothrix mexicana. Ephemeral algae overgrow subtidal assemblages which are extensively dominated by Lobophora variegata, but competitively do not exclude other species. Increases in the abundance of species coincided with a warming of about 2 °C in surface seawater temperature (SST) linked to the weakening of the Cold Canary Current and the Northwestern African upwelling. Shifts in the distribution and cover of ephemeral species follow the SST gradient from warmer waters in the western islands to colder waters in the eastern ones. While in the warmest western islands, species have spread quickly colonizing all type of substrates in just a few years (2005-2008), the occurrence of ephemerals towards the coldest eastern islands is yet inconspicuous. Copyright © 2012 Elsevier Ltd. All rights reserved.

Effect of tidal environment on the trophic balance of mixotrophic hexacorals using biochemical profile and photochemical performance as indicators.

PubMed

Rosa, Inês C; Rocha, Rui J M; Cruz, Igor; Lopes, Ana; Menezes, Natália; Bandarra, Narcisa; Kikuchi, Ruy; Serôdio, João; Soares, Amadeu M V M; Rosa, Rui

2018-04-01

Fluctuations of environmental factors in intertidal habitats can disrupt the trophic balance of mixotrophic cnidarians. We investigated the effect of tidal environments (subtidal, tidal pools and emerged areas) on fatty acid (FA) content of Zoanthus sociatus and Siderastrea stellata. Effect on photophysiology was also accessed as an autotrophy proxy. There was a general tendency of a lower percentage of zooplankton-associated FAs in colonies from emerged areas or tidal pools when compared with colonies from the subtidal environment. Moreover, tidal environment significantly affected the photophysiology of both species. Colonies from the subtidal generally showed lower values of α, ETR max and E k when compared with their conspecifics from tidal pools or emerged areas. However, the absence of consistent patterns in F v /F m and in dinoflagellate-associated FAs, suggest that these corals are well adapted to intertidal conditions. This suggests that intertidal pressures may disturb the trophic balance, mainly by affecting heterotrophy of these species. Copyright © 2018 Elsevier Ltd. All rights reserved.

Understanding the spatial distribution of subtidal reef assemblages in the southern Baltic Sea using towed camera platform imagery

NASA Astrophysics Data System (ADS)

Beisiegel, Kolja; Darr, Alexander; Zettler, Michael L.; Friedland, René; Gräwe, Ulf; Gogina, Mayya

2018-07-01

Quantitative sampling of sessile assemblages on temperate subtidal rocky reefs is expensive and severely time-limited by logistics. However, knowledge about distribution patterns of critical and endangered species and habitats at different spatial scales is needed for effective marine management strategies. To gain information of sessile community distribution on broader spatial scales (>1 km), visual imaging was employed for the first time on a reef complex in the south-western Baltic Sea. Analysis of 3000 images along 6 transects (in total 18 km long) from 10 to 40 m depth revealed high natural variation in reef physical structure, with well-defined changes in sessile species richness, cover and composition. Overall 14 morphological groups could be distinguished by imaging and 4 distinct community groups associated with specific habitat requirements were identified. Depth remained the best descriptor. However, data indicate that light intensity, concentration of organic carbon and suspended particulate matter have an effect on reef community distribution. Compared to fully marine conditions, the study revealed a unique zonation pattern in the circalittoral zone of the Fehmarnbelt brackish transition area, with an unexpected reef habitat in the trench. We conclude that towed camera platform imagery might help to close the information gap regarding rocky reefs in the temperate subtidal. It provides a valuable tool to assess the main distribution patterns of sessile assemblages on rough terrain, potentially applicable for management and conservation planning.

Strontium isotope record of seasonal scale variations in sediment sources and accumulation in low-energy, subtidal areas of the lower Hudson River estuary

USGS Publications Warehouse

Smith, J.P.; Bullen, T.D.; Brabander, D.J.; Olsen, C.R.

2009-01-01

Strontium isotope (87Sr/86Sr) profiles in sediment cores collected from two subtidal harbor slips in the lower Hudson River estuary in October 2001 exhibit regular patterns of variability with depth. Using additional evidence from sediment Ca/Sr ratios, 137Cs activity and Al, carbonate (CaCO3), and organic carbon (OCsed) concentration profiles, it can be shown that the observed variability reflects differences in the relative input and trapping of fine-grained sediment from seaward sources vs. landward sources linked to seasonal-scale changes in freshwater flow. During high flow conditions, the geochemical data indicate that most of the fine-grained sediments trapped in the estuary are newly eroded basin materials. During lower (base) flow conditions, a higher fraction of mature materials from seaward sources with higher carbonate content is trapped in the lower estuary. Results show that high-resolution, multi-geochemical tracer approaches utilizing strontium isotope ratios (87Sr/86Sr) can distinguish sediment sources and constrain seasonal scale variations in sediment trapping and accumulation in dynamic estuarine environments. Low-energy, subtidal areas such as those in this study are important sinks for metastable, short-to-medium time scale sediment accumulation. These results also show that these same areas can serve as natural recorders of physical, chemical, and biological processes that affect particle and particle-associated material dynamics over seasonal-to-yearly time scales. ?? 2009.

Taxonomic and numerical sufficiency in a Lower and Middle Miocene molluscan metacommunity of the Central Paratethys

NASA Astrophysics Data System (ADS)

Zuschin, Martin; Nawrot, Rafal; Harzhauser, Mathias; Mandic, Oleg

2015-04-01

Among the most important questions in quantitative palaeoecology is how taxonomic and numerical resolution affect the analysis of community and metacommunity patterns. A species-abundance data set (10 localities, 213 bulk samples, 478 species, > 49,000 shells) from Burdigalian, Langhian and Serravallian benthic marine molluscan assemblages of the Central Paratethys was studied for this purpose. Assemblages are from two nearshore habitats (estuarine and marine intertidal) and three subtidal habitats (estuarine, fully marine sandy, and fully marine pelitic), which represent four biozones and four 3rd order depositional sequences over more than three million years, and are developed along the same depth-related environmental gradient. Double-standardized data subsampled to 19 samples per habitat, each with a minimum of 50 specimens, were used to calculate R²-values from PERMANOVA as a measure of differences between habitats at three taxonomic levels (species, genera and families) and at five levels of data transformation (raw abundances, percentages, square-root transformed percentages, fourth-root transformed percentages, presence-absence data). Species discriminate better between habitats than genera and families, but the differences between taxonomic levels are much stronger in the subtidal, where genera and families have more species than than in the intertidal. When all habitats are compared percentages and square-root transformed percentages discriminate equally well and perform better than higher levels of data transformation. Among nearshore and among subtidal habitats, however, the ability to discriminate between habitats increases with the level of data transformation (i.e., it is best for fourth-root transformed percentages and presence-absence data). The impact of decreasing taxonomic resolution is of minor importance in nearshore habitats, which are characterized by similar assemblages showing strong dominance of few widely distributed species, and many families represented by only one species (77.9%). Consequently, the differentiation between nearshore habitats is much weaker compared to subtidal assemblages. The latter are characterized by more distinct, relatively even assemblages with comparatively few families represented by only one species (64.2%) and many rare taxa, whose importance is emphasized by higher levels of data transformation.

Book Review: Interdisciplinary Archaeological Research Programme Maasvlakte 2

NASA Astrophysics Data System (ADS)

Innes, J. B.

2015-10-01

Archaeological investigation in wetland environments has long been recognised as a specialised aspect of the discipline, where the levels of preservation of organic materials and sediments can be so high that cultural horizons and excavated artefacts can be placed into detailed palaeo-environmental, biological and landscape contexts, in contrast to the more limited information of this kind that is available from dryland archaeological sites. Inevitably, the recovery, integration and understanding of these vital additional data require an interdisciplinary approach and an investment in specialist equipment and scientific analyses if their full potential for reconstructing human occupation and site use within their landscape setting is to be fully realised. The mobilisation and integration of such a team of environmental specialists can require major financial resources, meticulous planning and close co-operation between the various disciplines involved. The most extreme example of wetland archaeology is probably integrated excavation and environmental archaeological research in subtidal locations, but modern development of major coastal infrastructure is increasingly making sites available for study from the early to mid-Holocene or even earlier that have been overwhelmed by sea-level rise and which would otherwise be beyond the reach of archaeological investigation. Such very large scale subtidal interdisciplinary research projects are major, expensive and long-term undertakings and are still rare enough to be publication highlights in the discipline of environmental archaeology. Important recent examples of subtidal work in north-west Europe include Pedersen et al. (1997) and elements of Fischer (1995) in south Scandinavia, and investigations off southern England (Allen and Gardiner, 2000; Momber et al., 2011; Sturt et al., 2014). Research on submerged palaeoenvironments and palaeolandscapes has also seen significant advances (Griffiths et al., 2015), with the reconstruction of the Mesolithic palaeogeography of the central North Sea, dubbed 'Doggerland', perhaps the most significant achievement (Gaffney et al., 2009). This new volume, edited by J.M. Moree and M.M. Sier, forms an impressive contribution to the genre of subtidal interdisciplinary environmental archaeology, and is an excellent example of the high quality academic research we have come to expect from Dutch workers, in a well organised and well illustrated monograph.

Movement of pulsed resource subsidies from kelp forests to deep fjords.

PubMed

Filbee-Dexter, Karen; Wernberg, Thomas; Norderhaug, Kjell Magnus; Ramirez-Llodra, Eva; Pedersen, Morten Foldager

2018-05-01

Resource subsidies in the form of allochthonous primary production drive secondary production in many ecosystems, often sustaining diversity and overall productivity. Despite their importance in structuring marine communities, there is little understanding of how subsidies move through juxtaposed habitats and into recipient communities. We investigated the transport of detritus from kelp forests to a deep Arctic fjord (northern Norway). We quantified the seasonal abundance and size structure of kelp detritus in shallow subtidal (0‒12 m), deep subtidal (12‒85 m), and deep fjord (400‒450 m) habitats using a combination of camera surveys, dive observations, and detritus collections over 1 year. Detritus formed dense accumulations in habitats adjacent to kelp forests, and the timing of depositions coincided with the discrete loss of whole kelp blades during spring. We tracked these blades through the deep subtidal and into the deep fjord, and showed they act as a short-term resource pulse transported over several weeks. In deep subtidal regions, detritus consisted mostly of fragments and its depth distribution was similar across seasons (50% of total observations). Tagged pieces of detritus moved slowly out of kelp forests (displaced 4‒50 m (mean 11.8 m ± 8.5 SD) in 11‒17 days, based on minimum estimates from recovered pieces), and most (75%) variability in the rate of export was related to wave exposure and substrate. Tight resource coupling between kelp forests and deep fjords indicate that changes in kelp abundance would propagate through to deep fjord ecosystems, with likely consequences for the ecosystem functioning and services they provide.

Effect of warming rate on the critical thermal maxima of crabs, shrimp and fish.

PubMed

Vinagre, Catarina; Leal, Inês; Mendonça, Vanessa; Flores, Augusto A V

2015-01-01

The threat of global warming has prompted numerous recent studies on the thermal tolerance of marine species. A widely used method to determine the upper thermal limit has been the Critical Thermal Maximum (CTMax), a dynamic method, meaning that temperature is increased gradually until a critical point is reached. This method presents several advantages over static methods, however, there is one main issue that hinders interpretation and comparison of CTMax results: the rate at which the temperature is increased. This rate varies widely among published protocols. The aim of the present work was to determine the effect of warming rate on CTMax values, using different animal groups. The influence of the thermal niche occupied by each species (intertidal vs subtidal) and habitat (intertidal vs subtidal) was also investigated. CTMax were estimated at three different rates: 1°Cmin(-1), 1°C30min(-1) and 1°Ch(-1), in two species of crab, Eurypanopeus abbreviatus and Menippe nodifrons, shrimp Palaemon northropi and Hippolyte obliquimanus and fish Bathygobius soporator and Parablennius marmoreus. While there were significant differences in the effect of warming rates for some species, for other species warming rate produced no significant differences (H. obliquimanus and B. soporator). While in some species slower warming rates lead to lower CTMax values (P. northropi and P. marmoreus) in other species the opposite occurred (E. abbreviatus and M. nodifrons). Biological group has a significant effect with crabs' CTMax increasing at slower warming rates, which did not happen for shrimp and fish. Subtidal species presented lower CTMax, at all warming rates tested. This study highlights the importance of estimating CTMax values at realistic rates that species encounter in their environment and thus have an ecological value. Copyright © 2014 Elsevier Ltd. All rights reserved.

Spatial and temporal patterns of subtidal and intertidal crabs excursions

NASA Astrophysics Data System (ADS)

Silva, A. C. F.; Boaventura, D. M.; Thompson, R. C.; Hawkins, S. J.

2014-01-01

Highly mobile predators such as fish and crabs are known to migrate from the subtidal zone to forage in the intertidal zone at high-tide. The extent and variation of these habitat linking movements along the vertical shore gradient have not been examined before for several species simultaneously, hence not accounting for species interactions. Here, the foraging excursions of Carcinus maenas (L.), Necora puber (Linnaeus, 1767) and Cancer pagurus (Linnaeus, 1758) were assessed in a one-year mark-recapture study on two replicated rocky shores in southwest U.K. A comparison between the abundance of individuals present on the shore at high-tide with those present in refuges exposed at low-tide indicated considerable intertidal migration by all species, showing strong linkage between subtidal and intertidal habitats. Estimates of population size based on recapture of marked individuals indicated that an average of ~ 4000 individuals combined for the three crab species, can be present on the shore during one tidal cycle. There was also a high fidelity of individuals and species to particular shore levels. Underlying mechanisms for these spatial patterns such as prey availability and agonistic interactions are discussed. Survival rates were estimated using the Cormack-Jolly-Seber model from multi-recapture analysis and found to be considerably high with a minimum of 30% for all species. Growth rates were found to vary intraspecifically with size and between seasons. Understanding the temporal and spatial variations in predation pressure by crabs on rocky shores is dependent on knowing who, when and how many of these commercially important crab species depend on intertidal foraging. Previous studies have shown that the diet of these species is strongly based on intertidal prey including key species such as limpets; hence intertidal crab migration could be associated with considerable impacts on intertidal assemblages.

Currents in monterey submarine canyon

USGS Publications Warehouse

Xu, J. P.; Noble, M.A.

2009-01-01

Flow fields of mean, subtidal, and tidal frequencies between 250 and 3300 m water depths in Monterey Submarine Canyon are examined using current measurements obtained in three yearlong field experiments. Spatial variations in flow fields are mainly controlled by the topography (shape and width) of the canyon. The mean currents flow upcanyon in the offshore reaches (>1000 m) and downcanyon in the shallow reaches (100-m amplitude isotherm oscillations and associated high-speed rectilinear currents. The 15-day spring-neap cycle and a ???3-day??? band are the two prominent frequencies in subtidal flow field. Neither of them seems directly correlated with the spring-neap cycle of the sea level.

Spatial variability of sediment transport processes over intra‐ and subtidal timescales within a fringing coral reef system

USGS Publications Warehouse

Pomeroy, Andrew; Lowe, Ryan J.; Ghisalberti, Marco; Winter, Gundula; Storlazzi, Curt D.; Cuttler, Michael V. W.

2018-01-01

Sediment produced on fringing coral reefs that is transported along the bed or in suspension affects ecological reef communities as well as the morphological development of the reef, lagoon, and adjacent shoreline. This study quantified the physical process contribution and relative importance of incident waves, infragravity waves, and mean currents to the spatial and temporal variability of sediment in suspension. Estimates of bed shear stresses demonstrate that incident waves are the key driver of the SSC variability spatially (reef flat, lagoon, and channels) but cannot not fully describe the SSC variability alone. The comparatively small but statistically significant contribution to the bed shear stress by infragravity waves and currents, along with the spatial availability of sediment of a suitable size and volume, is also important. Although intra‐tidal variability in SSC occurs in the different reef zones, the majority of the variability occurs over longer slowly varying (subtidal) time scales, which is related to the arrival of large incident waves at a reef location. The predominant flow pathway, which can transport suspended sediment, consists of cross‐reef flow across the reef flat that diverges in the lagoon and returns offshore through channels. This pathway is primarily due to subtidal variations in wave‐driven flows, but can also be driven alongshore by wind stresses when the incident waves are small. Higher frequency (intra‐tidal) current variability also occur due to both tidal flows, as well as variations in the water depth that influence wave transmission across the reef and wave‐driven currents.

DOCUMENTING THE INTERTIDAL COMPONENT OF EELGRASS DISTRIBUTIONS IN PACIFIC NORTHWEST ESTUARIES USING COLOR INFRARED AERIAL PHOTOGRAPHY

EPA Science Inventory

The objective of this study was to develop and test a rapid, cost-effective method of mapping the intertidal (and surface-visible subtidal) distribution of eelgrass (Zostera marina L.) meadows and patches in the turbid coastal estuaries of the Pacific Northwest (PNW). Initial co...

Peritidal cyclic sedimentation from La Manga Formation (Oxfordian), Neuquén Basin, Mendoza, Argentina

NASA Astrophysics Data System (ADS)

Palma, Ricardo M.; Kietzmann, Diego A.; Bressan, Graciela S.; Martín-Chivelet, Javier; López-Gómez, José; Farias, María E.; Iglesias Llanos, María P.

2013-11-01

The La Manga Formation consists of marine carbonates and represents most of the sedimentary record of the Callovian-Oxfordian in the Neuquén Basin. Three localities in the southern Mendoza province were studied and their cyclicity was determined by means of facies analysis and their vertical arrangement. Facies of inner ramp, that were deposited in extremely shallow-water environments with intermittent subaerial exposures have been broken down into shallow subtidal, and intertidal-supratidal environments. Shallow subtidal facies are arranged into decimetre scale upward-shallowing cycles composed of marls, laminated or massive mudstones or bioclastic wackestones and intraclastic wackestone-packstones. Intertidal-supratidal centimetre-scale cycles consist of an upward-shallowing succession of restricted facies, overlaid by horizontal or crinkle microbial laminites, flat pebble conglomerates or breccias beds. The defined cycles show a shallowing upward trend in which the evidence of relative sea-level lowering is accepted. The interpretation of Fischer plots allowed the recognition of changes in accommodation space.

Mangrove removal in the belize cays: effects on mangrove-associated fish assemblages in the intertidal and subtidal

USGS Publications Warehouse

Taylor, D.S.; Reyier, E.A.; Davis, W.P.; McIvor, C.C.

2007-01-01

We investigated the effects of mangrove cutting on fish assemblages in Twin Cays, Belize, in two habitat types. We conducted visual censuses at two sites in adjoining undisturbed/disturbed (30%–70% of shoreline fringe removed) sub-tidal fringing Rhizophora mangle Linnaeus, 1753. Observers recorded significantly more species and individuals in undisturbed sites, especially among smaller, schooling species (e.g., atherinids, clupeids), where densities were up to 200 times greater in undisturbed habitat. Multivariate analyses showed distinct species assemblages between habitats at both sites. In addition, extensive trapping with wire minnow traps within the intertidal zone in both undisturbed and disturbed fringing and transition (landward) mangrove forests was conducted. Catch rates were low: 638 individuals from 24 species over 563 trap-nights. Trap data, however, indicated that mangrove disturbance had minimal effect on species composition in either forest type (fringe/transition). Different results from the two methods (and habitat types) may be explained by two factors: (1) a larger and more detectable species pool in the subtidal habitat, with visual "access" to all species, and (2) the selective nature of trapping. Our data indicate that even partial clearing of shoreline and more landward mangroves can have a significant impact on local fish assemblages.

Variability of suspended-sediment concentration at tidal to annual time scales in San Francisco Bay, USA

USGS Publications Warehouse

Schoellhamer, D.H.

2002-01-01

Singular spectrum analysis for time series with missing data (SSAM) was used to reconstruct components of a 6-yr time series of suspended-sediment concentration (SSC) from San Francisco Bay. Data were collected every 15 min and the time series contained missing values that primarily were due to sensor fouling. SSAM was applied in a sequential manner to calculate reconstructed components with time scales of variability that ranged from tidal to annual. Physical processes that controlled SSC and their contribution to the total variance of SSC were (1) diurnal, semidiurnal, and other higher frequency tidal constituents (24%), (2) semimonthly tidal cycles (21%), (3) monthly tidal cycles (19%), (4) semiannual tidal cycles (12%), and (5) annual pulses of sediment caused by freshwater inflow, deposition, and subsequent wind-wave resuspension (13%). Of the total variance 89% was explained and subtidal variability (65%) was greater than tidal variability (24%). Processes at subtidal time scales accounted for more variance of SSC than processes at tidal time scales because sediment accumulated in the water column and the supply of easily erodible bed sediment increased during periods of increased subtidal energy. This large range of time scales that each contained significant variability of SSC and associated contaminants can confound design of sampling programs and interpretation of resulting data.

Ecological and physiological controls of species composition in green macroalgal blooms.

PubMed

Nelson, Timothy A; Haberlin, Karalon; Nelson, Amorah V; Ribarich, Heather; Hotchkiss, Ruth; Van Alstyne, Kathryn L; Buckingham, Lee; Simunds, Dejah J; Fredrickson, Kerri

2008-05-01

Green macroalgal blooms have substantially altered marine community structure and function, specifically by smothering seagrasses and other primary producers that are critical to commercial fisheries and by creating anoxic conditions in enclosed embayments. Bottom-up factors are viewed as the primary drivers of these blooms, but increasing attention has been paid to biotic controls of species composition. In Washington State, USA, blooms are often dominated by Ulva spp. intertidally and Ulvaria obscura subtidally. Factors that could cause this spatial difference were examined, including competition, grazer preferences, salinity, photoacclimation, nutrient requirements, and responses to nutrient enrichment. Ulva specimens grew faster than Ulvaria in intertidal chambers but not significantly faster in subtidal chambers. Ulva was better able to acclimate to a high-light environment and was more tolerant of low salinity than Ulvaria. Ulvaria had higher tissue N content, chlorophyll, chlorophyll b: chlorophyll a, and protein content than Ulva. These differences suggest that nitrogen availability could affect species composition. A suite of five grazers preferred Ulva to Ulvaria in choice experiments. Thus, bottom-up factors allow Ulva to dominate the intertidal zone while resistance to grazers appears to allow Ulvaria to dominate the subtidal zone. While ulvoid algae are in the same functional-form group, they are not functionally redundant.

The dynamics of subtidal poleward flows over a narrow continental shelf, Palos Verdes, CA

USGS Publications Warehouse

Noble, M.A.; Ryan, H.F.; Wiberg, P.L.

2002-01-01

The Palos Verdes peninsula is a short, very narrow (< 3 km) shelf in southern California that is bracketed by two large embayments. In May 1992, arrays of up to 4 moorings and 2 benthic tripods were deployed in a yearlong study of the circulation processes over this shelf and the adjacent slope. Wind stress, coastal sea level, atmospheric pressure and wave records were obtained from offshore sites and from coastal stations surrounding Palos Verdes. Bottom stress calculated for the mid-shelf sites using a boundary-layer model and data from the above instruments indicated the bottom drag coefficient over this shelf is about 0.003 Currents flow toward the northwest along the shelf and upper slope. Speeds are generally around 20-30 cm/s. There was no obvious seasonal structure in the flow. The first EOF for subtidal alongshelf current accounted for nearly 70% of the variance at sites on the shelf and upper slope. The dominant fluctuations had periods between 5 and 20 days, periods longer than seen in the regional wind stress field. Coastal sea level and the alongshore gradient in sea level had a similar concentration of energy in the 5-20 day frequency band. About 30% of the alongshelf flow was coherent with the alongshelf pressure gradient; currents flowed down the pressure gradient with minimal phase lag. Winds accounted for only 15-20% of the variance in subtidal currents, but the measured effect of wind stress was large. A 1 dyne/cm2 wind stress was associated with a 20-30 cm/s alongshore current. Both the regional wind stress and the alongshelf pressure gradients had spatial scales much larger than found on this small shelf. Subtidal flows forced by these regional fields were set up in the adjacent, much broader basins. The currents amplified as they moved onto the narrow shelf between the basins. Hence, local wind-driven currents had anomalously large amplitudes. The momentum equations for alongshelf wind or pressure gradients did not balance because some of the measured terms were associated with regional fields, others with local process. Our observations suggest that it is more difficult to determine which measured fields reflect the local processes in regions with rapidly changing topography. ?? 2002 Elsevier Science Ltd. All rights reserved.

Oyster resource zones of the Barataria and Terrebonne estuaries of Louisiana

USGS Publications Warehouse

Melancon, E.; Soniat, T.; Cheramie, V.; Dugas, R.; Barras, J.; Lagarde, M.

1998-01-01

A 1:100,000 scale map delineating the subtidal oyster resource zones within the Barataria and Terrebonne estuaries was developed. Strategies to accomplish the task included interviews with Louisiana oystermen and state biologists to develop a draft map, field sampling to document oyster (Crassostrea virginica), Dermo (Perkinsus marinus), and oyster drill (Stramonita haemastoma) abundances, use of historical salinity data to aid in map verification, and public meetings to allow comment on a draft before final map preparation. Four oyster resource zones were delineated on the final map: a dry zone where subtidal oysters may be found when salinities increase, a wet zone where subtidal oysters may be found when salinities are suppressed, a wet-dry zone where subtidal oysters may be consistently found due to favorable salinities, and a high-salinity zone where natural oyster populations are predominantly found in intertidal and shallow waters. The dry zone is largely coincident with the brackish-marsh habitat, with some intermediate-type marsh. The wet-dry zone is found at the interface of the brackish and saline marshes, but extends further seaward than up-estuary. The wet zone and the high salinity zones are areas of mostly open water fringed by salt marshes. The dry zone encompasses 91,775 hectares, of which 48,788 hectares are water (53%). The wet zone encompasses 83,525 hectares, of which 66,958 hectares are water (80%). The wet-dry zone encompasses 171,893 hectares, of which 104,733 hectares are water (61%). The high salinity zone encompasses 125,705 hectares, of which 113,369 hectares are water (90%). There is a clear trend of increasing water habitat in the four zones over the past 30 years, and oysters are now cultivated on bottoms that were once marsh. The map should be useful in managing the effects upon oysters of freshwater diversions into the estuaries. It provides a pre-diversion record of the location of oyster resource zones and should prove helpful in the seaward relocation of oysters leases.

Intertidal oysters reach their physiological limit in a future high-CO2 world.

PubMed

Scanes, Elliot; Parker, Laura M; O'Connor, Wayne A; Stapp, Laura S; Ross, Pauline M

2017-03-01

Sessile marine molluscs living in the intertidal zone experience periods of internal acidosis when exposed to air (emersion) during low tide. Relative to other marine organisms, molluscs have been identified as vulnerable to future ocean acidification; however, paradoxically it has also been shown that molluscs exposed to high CO 2 environments are more resilient compared with those molluscs naive to CO 2 exposure. Two competing hypotheses were tested using a novel experimental design incorporating tidal simulations to predict the future intertidal limit of oysters in a high-CO 2 world; either high-shore oysters will be more tolerant of elevated P CO 2 because of their regular acidosis, or elevated P CO 2  will cause high-shore oysters to reach their limit. Sydney rock oysters, Saccostrea glomerata , were collected from the high-intertidal and subtidal areas of the shore and exposed in an orthogonal design to either an intertidal or a subtidal treatment at ambient or elevated P CO 2 , and physiological variables were measured. The combined treatment of tidal emersion and elevated P CO 2  interacted synergistically to reduce the haemolymph pH (pH e ) of oysters, and increase the P CO 2  in the haemolymph ( P e,CO 2 ) and standard metabolic rate. Oysters in the intertidal treatment also had lower condition and growth. Oysters showed a high degree of plasticity, and little evidence was found that intertidal oysters were more resilient than subtidal oysters. It is concluded that in a high-CO 2 world the upper vertical limit of oyster distribution on the shore may be reduced. These results suggest that previous studies on intertidal organisms that lacked tidal simulations may have underestimated the effects of elevated P CO 2 . © 2017. Published by The Company of Biologists Ltd.

Sedimentologic and diagenetic controls on aquifer properties, Lower Cretaceous Edwards Carbonate Aquifer, Texas: Implications for aquifer management

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hovorka, S.D.; Dutton, A.R.; Ruppel, S.C.

1994-09-01

The three-dimensional distribution of water in the Edwards aquifer was assessed using a core and log-based study. Porosity distribution reflects both depositional fabric and subsequent diagenesis. Vertical facies stacking patterns influence the depositional porosity as well as dolomitization and diagentic porosity modification. Subtidal facies deposited during sea level highstands are generally undolomitized and exhibit low porosity (5-10%); platform grainstones typically have high depositional porosity and significant solution enhancement (20-42% porosity). Dolomitized subtidal facies in tidal-flat-capped cycles have very high porosity (20-40%) because of selective dolomite dissolution in the freshwater aquifer. Porosity in gypsum beds is high in some areas becausemore » of dissolution and collapse, but low where gypsum was replaced by calcite cement. Low-energy subtidal and evaporitic units in the Maverick basin have porosity generally less than 15%. The overlying basinal packstones and grainstones have solution-enhanced porosities of 25 to 35%. Diagenesis associated with fluctuations in water chemistry near the saline-freshwater interface may explain one high-porosity trend. Other complex patterns of high and low porosity are attributed to structurally and hydrologically controlled porosity enhancement and cementation. Three-dimensional mapping of porosity trends provides data for improved aquifer management. Only about 3% of the maximum stored water lies above the water table at which natural spring flow is diminished. An average specific yield of 42% in the unconfined aquifer is determined from total porosity, changes in the water-table elevation, and changes in estimated recharge and discharge. Average storativity of 2.6 x 10{sup -4} in the confined Edwards is estimated using average porosity and barometric efficiency calculated from comparing water-level hydrographs and atmospheric pressure changes.« less

Sea otter studies in Glacier Bay National Park and Preserve: annual report 2002

USGS Publications Warehouse

Bodkin, James L.; Kloecker, Kimberly A.; Esslinger, George G.; Monson, Daniel H.; Coletti, Heather A.; Doherty, Janet

2003-01-01

Since 1995, the number of sea otters in Glacier Bay proper has increased from around 5 to more than 1200. Sea otter distribution is mostly limited to the Lower Bay, south of Sandy Cove, and is not continuous within that area. Concentrations occur in the vicinity of Sita Reef and Boulder Island and between Pt. Carolus and Rush Pt. on the west side of the Bay, although there have been occasional sightings north of Sandy Cove (Figure 1). Large portions of the Bay remain unoccupied by sea otters, but recolonization is occurring rapidly. Most prey recovered by sea otters in Glacier Bay are ecologically, commercially, or socially important species. In 2002 sea otter diet consisted of 35% clam, 26% mussel, 3% crab, 3.0% snail, 2% starfish, 11% urchins, 2% other, and 20% unidentified. Dominant clam species include the butter clam, Saxidomus gigantea, the Greenland cockle, Serripes groenlandicus, and the littleneck clam, Protothaca staminea. Urchins are primarily green urchins, Strongylocentrotus droebachiensis, and the mussel is Modiolus modiolus. Crabs observed in 2002 include the Dungeness, Cancer magister, the kelp crab Pugettia gracilis, and the helmet crab, Telmessus cherigonus. Although we characterize diet at broad geographic scales, we have previously found diet to vary between sites separated by as little as several hundred meters. Dietary variation among and within sites can reflect differences in prey availability as well as individual specialization. We estimated species composition, density, biomass, and sizes of subtidal clams, urchins, and mussels at 13 sites in Glacier Bay and 5 sites in nearby Port Althorp, where sea otters have been present for at least 20 years. All sites were selected based on the presence of abundant clam siphons and the absence of sea otters (Glacier Bay) or abundant shell litter and the presence of sea otters (Port Althorp). Glacier Bay sites were selected to achieve a broad geographic sample of dense subtidal clam beds within Glacier Bay prior to occupation and foraging by sea otters. Port Althorp sites were chosen to achieve a representative sample of subtidal clam beds already under prolonged foraging pressure by sea otters. There was no direct evidence of otter foraging at any of our Glacier Bay sampling sites. In Glacier Bay, we sampled 15,338 bivalves (average of 1,180/site) representing 14 species of clam, 2 species of mussel, and a single scallop and we sampled 6,917 urchins (average of 513/site). In Port Althorp, we sampled 1,034 bivalves (average of 207/site) representing 14 species of clam. We found only 5 urchins, all S. droebachiensis. Mean densities and biomass of all subtidal clams were significantly greater in Glacier Bay (59.2 and 99/0.25m2 compared to Port Althorp (10.3 and 5.8/0.25m2 (p Our contrasts of subtidal clam populations between Glacier Bay and Port Althorp suggest that clam densities will likely decline by about a factor of six and that clam biomass estimates will decline by more than a factor of ten. Numerically dominant species of clams, P. staminea, S. gigantea, Macoma sp. and Mya sp. were all significantly greater in density and biomass in Glacier Bay, while C. nutalli density was low but significantly higher in Port Althorp. Subtidal clam species diversity was significantly greater in Port Althorp compared to Glacier Bay, although this may simply reflect habitat differences. Sea urchin densities were high in Glacier Bay, while in Port Althorp urchins were virtually absent. Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters at present. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but will also trigger ecosystem level changes, as prey for other predators, such as octopus, sea stars, fishes, birds and mammals are modified. Sea otters will also modify benthic habitats through excavation of sediments required to extract burrowing infauna such as clams. Effects of sediment disturbance by foraging sea otters are not understood. Glacier Bay also supports large populations of other preferred sea otter prey, such as king (Paralithodes sp.), tanner (Chionoecetes sp.) and dungeness (Cancer magister) crabs and green sea urchins (S. droebachiensis). As the colonization of Park waters by sea otters continues, it is also likely that dramatic changes will occur in the species composition, abundance, and size class distribution of many components of the nearshore marine ecosystem. Many of the changes will occur as a direct result of predation by sea otters. Others will result from indirect or cascading effects of sea otter foraging, such as increased kelp production and modified prey availability for other nearshore predators. Without recognizing and quantifying the extent of change initiated by the colonization of Glacier Bay by sea otters, management of nearshore resources will be severely constrained for many decades.

Decadal changes in the distribution of common intertidal seaweeds in Galicia (NW Iberia).

PubMed

Piñeiro-Corbeira, Cristina; Barreiro, Rodolfo; Cremades, Javier

2016-02-01

Seaweed assemblages in Atlantic Europe are been distorted by global change, but the intricate coastal profile of the area suggests that susceptibility may differ between regions. In particular, NW Iberia is an important omission because no study has systematically assessed long-term changes in a large number of species. Using intertidal surveys for 33 common perennial seaweeds, we show that the average number of species per site declined significantly from 1998-99 to 2014 in NW Iberia. The largest drops in site occupancy were detected in kelps, fucoids, and carrageenan-producing Rhodophyta. Parallel analyses revealed significant upward trends in SST, air temperature, and strong waves; meanwhile, nutrients decreased slightly except in areas affected by local inputs. Similar changes reported for subtidal assemblages in other parts of Atlantic Europe suggest that the drivers may be ubiquitous. Nonetheless, a more proper assessment of both global and local impacts, will require further surveys, and the regular monitoring of intertidal perennial seaweeds appears as a cost-effective alternative to discriminate genuine long-term trends from transitory fluctuations. Copyright © 2015 Elsevier Ltd. All rights reserved.

Differences in rocky reef habitats related to human disturbances across a latitudinal gradient.

PubMed

Glasby, Tim M; Gibson, Peter T; Cruz-Motta, Juan J

2017-08-01

This study tested for differences in the composition of intertidal and shallow subtidal rocky reef habitats subjected to a range of human pressures across ∼1000 km of coastline in New South Wales, Australia over 5 years. Percentage covers of habitats were sampled using aerial photography and a large grain size (20 m 2 intertidal; 800 m 2 subtidal) in a nested hierarchical design. Results were consistent with anthropogenic impacts on habitat structure only around estuaries with the most heavily urbanised or agriculturally-intense catchments. The most convincing relationships documented here related to environmental variables such as SST, latitude, reef width and proximity to large estuaries irrespective of human disturbance levels. Moreover, there were suggestions that any influences of estuarine waters (be they anthropogenic or natural) on reef assemblages could potentially extend 10s of kilometres from major estuaries. In general, our results supported those of studies that utilised smaller grain sizes (greatest variability often at smallest spatial scales), but we found that variability over scales of 100s of km can be similar to or greater than variability over scales of 10s of metres. Copyright © 2017 Elsevier Ltd. All rights reserved.

Anatomy of a cyclically packaged Mesoproterozoic carbonate ramp in northern Canada

NASA Astrophysics Data System (ADS)

Sherman, A. G.; Narbonne, G. M.; James, N. P.

2001-03-01

Carbonates in the upper member of the Mesoproterozoic Victor Bay Formation are dominated by lime mud and packaged in cycles of 20-50 m. These thicknesses exceed those of classic shallowing-upward cycles by almost a factor of 10. Stratigraphic and sedimentological evidence suggests high-amplitude, high-frequency glacio-eustatic cyclicity, and thus a cool global climate ca. 1.2 Ga. The Victor Bay ramp is one of several late Proterozoic carbonate platforms where the proportions of lime mud, carbonate grains, and microbialites are more typical of younger Phanerozoic successions which followed the global waning of stromatolites. Facies distribution in the study area is compatible with deposition on a low-energy, microtidal, distally steepened ramp. Outer-ramp facies are hemipelagic lime mudstone, shale, carbonaceous rhythmite, and debrites. Mid-ramp facies are molar-tooth limestone tempestite with microspar-intraclast lags. In a marine environment where stromatolitic and oolitic facies were otherwise rare, large stromatolitic reefs developed at the mid-ramp, coeval with inner-ramp facies of microspar grainstone, intertidal dolomitic microbial laminite, and supratidal evaporitic red shale. Deep-subtidal, outer-ramp cycles occur in the southwestern part of the study area. Black dolomitic shale at the base is overlain by ribbon, nodular, and carbonaceous carbonate facies, all of which exhibit signs of synsedimentary disruption. Cycles in the northeast are shallow-subtidal and peritidal in character. Shallow-subtidal cycles consist of basal deep-water facies, and an upper layer of subtidal molar-tooth limestone tempestite interbedded with microspar calcarenite facies. Peritidal cycles are identical to shallow-subtidal cycles except that they contain a cap of dolomitic tidal-flat microbial laminite, and rarely of red shale sabkha facies or of sandy polymictic conglomerate. A transect along the wall of a valley extending 8.5 km perpendicular to depositional strike reveals progradation of inner-ramp tidal flats over outer- and mid-ramp facies during shoaling. The maximum basinward progradation of peritidal facies coincides with a zone of slope failure that may have promoted the development of the stromatolitic reefs. The sea-level history of the Victor Bay Formation is represented by three hectometre-scale sequences. An initial flooding event resulted in deposition of the lower Victor Bay shale member. Upper-member carbonate cycles were then deposited during highstand. Mid-ramp slumping was followed by late-highstand reef development. The second sequence began with development of an inner-ramp lowstand unconformity and a thick mid-ramp lowstand wedge. A second transgression promoted a more modest phase of reef development at the mid-ramp and shallow-water deposition continued inboard. A third and final transgressive episode eventually led to flooding of the backstepping ramp. Overall consistent cycle thickness and absence of truncated cycles, as well as the high rate and amount of creation of accommodation space, suggest that the periodicity and amplitude of sea-level fluctuation were relatively uniform, and point to a eustatic rather than tectonic mechanism of relative sea-level change. High-amplitude, high-frequency eustatic sea-level change is characteristic of icehouse worlds in which short-term, large-scale sea-level fluctuations accompany rapidly changing ice volumes affected by Milankovitch orbital forcing. Packaging of cyclic Upper Victor Bay carbonates therefore supports the hypothesis of a late Mesoproterozoic glacial period, as proposed by previous workers.

Add-on conservation benefits of marine territorial user rights fishery policies in central Chile.

PubMed

Gelcich, Stefan; Godoy, Natalio; Prado, Luis; Castilla, Juan Carlos

2008-01-01

To combine the rational use of marine benthic resources and economic development of small-scale fishers, Chile passed legislation in 1991 establishing a comanagement policy that grants exclusive territorial user rights for fisheries (TURFs) to artisanal fisher organizations in well-defined inshore coastal areas, known as Management and Exploitation Areas for Benthic Resources (MEABRs). In general the policy has been proclaimed a management and economic success because benthic resource abundances have increased inside MEABRs in comparison with open-access areas. However, there is a lack of studies assessing the impact of this management policy on nontargeted subtidal species and community assemblages and the policy's implications for biodiversity and conservation. This study starts to fill this gap and links the allocation of TURFs for benthic resources with add-on conservation benefits for species that are not directly linked with the fishery policy. Comparative subtidal surveys inside vs. outside MEABRs were used to assess the effects of three MEABRs on managed targeted benthic species, biodiversity (species richness), and community assemblages in central Chile. Surveys focused exclusively on subtidal kelp forest habitats dominated by Lessonia trabeculata, spanning 4-12 m in depth and with similar levels of habitat complexity. The study comprised: (1) quantification of kelp forest complexity, (2) understory survey of sessile species, (3) quantification of conspicuous benthic macroinvertebrates, including those under management, and (4) quantification of reef-fish species inside the kelp habitat. Results showed population enhancement of target-managed invertebrates inside MEABRs. Moreover, reef-fish species were significantly more diverse and abundant inside MEABRs, and community assemblages of nontarget benthic invertebrates and reef fish were significantly different inside vs. outside MEABRs. The comanagement of inshore benthic resources in Chile, through MEABRs aims for the sustainability of invertebrate and algae stocks. However, our study shows that this management tool, which in practice restricts access to the entire management area, provides important conservation add-on effects for species that are not the focus of the management policies. Therefore, in Chile, the hundreds of already established MEABRs could represent an important ancillary network, which complements the biodiversity objectives of fully protected areas such as no-take marine protected areas or others.

Spongy-like porosity in peritidal carbonates: An interaction of cyclic sea-level oscillations, fresh water supply and sediment texture

NASA Astrophysics Data System (ADS)

Todaro, S.; Hollis, C.; Di Stefano, P.

2016-03-01

This paper focuses upon the analysis of a complex paleokarstic system recorded within uppermost Triassic peritidal cycles in northwestern Sicily. Besides documenting spectacular karstification at the Triassic/Jurassic boundary, it provides an example of stratabound 'spongy' or 'swiss-cheese' dissolution. On the base of field observations, microfacies analysis, transmitted-light and cathodoluminescence petrography and stable-isotope analyses we put forward an original model for the formation of this peculiar stratabound dissolution. It implies a complex interaction of several controlling factors at the interface between the marine and meteoric diagenetic realms during the relative cyclic oscillations of sea-level. The presence of a fresh water supply from an adjacent emerged area is the key for the periodic formation of a mixing water lens during the relative sea level lowstand that brought about the subaerial exposure of the platform. The resulting dissolution pattern in the subtidal unit of a specific cycle is strongly controlled by the textural features of the sediments. In the case of bioturbated wackestones the 'spongy' or 'swiss-cheese' pattern develops, while in mollusk-rich beds biomoldic porosity occurs. In well-sorted subtidal members, such as algal grainstones, the dissolution originates as randomly distributed vuggy porosity. During periodic flooding of the platform, a new subtidal unit is formed and the dissolution stops as fully marine phreatic conditions are re-established.

Context-dependency in the effects of nutrient loading and consumers on the availability of space in marine rocky environments.

PubMed

Bulleri, Fabio; Russell, Bayden D; Connell, Sean D

2012-01-01

Enhanced nutrient loading and depletion of consumer populations interact to alter the structure of aquatic plant communities. Nonetheless, variation between adjacent habitats in the relative strength of bottom-up (i.e. nutrients) versus top-down (i.e. grazing) forces as determinants of community structure across broad spatial scales remains unexplored. We experimentally assessed the importance of grazing pressure and nutrient availability on the development of macroalgal assemblages and the maintenance of unoccupied space in habitats differing in physical conditions (i.e. intertidal versus subtidal), across regions of contrasting productivity (oligotrophic coasts of South Australia versus the more productive coasts of Eastern Australia). In Eastern Australia, grazers were effective in maintaining space free of macroalgae in both intertidal and subtidal habitats, irrespective of nutrient levels. Conversely, in South Australia, grazers could not prevent colonization of space by turf-forming macroalgae in subtidal habitats regardless of nutrients levels, yet in intertidal habitats removal of grazers reduced unoccupied space when nutrients were elevated. Assessing the effects of eutrophication in coastal waters requires balancing our understanding between local consumer pressure and background oceanographic conditions that affect productivity. This broader-based understanding may assist in reconciling disproportionately large local-scale variation, a characteristic of ecology, with regional scale processes that are often of greater relevance to policy making and tractability to management.

The impact of rising sea temperature on innate immune parameters in the tropical subtidal sea urchin Lytechinus variegatus and the intertidal sea urchin Echinometra lucunter.

PubMed

Branco, Paola Cristina; Borges, João Carlos Shimada; Santos, Marinilce Fagundes; Jensch Junior, Bernard Ernesto; da Silva, José Roberto Machado Cunha

2013-12-01

Ocean temperatures are rising throughout the world, making it necessary to evaluate the impact of these temperature changes on sea urchins, which are well-known bioindicators. This study evaluated the effect of an increase in temperature on the immune response of the subtidal Lytechinus variegatus and the intertidal Echinometra lucunter sea urchins. Both species were exposed to 20 (control), 25 and 30 °C temperatures for 24 h, 2, 7 and 14 days. Counting of coelomocytes and assays on the phagocytic response, adhesion and spreading of coelomocytes were performed. Red and colorless sphere cells were considered biomarkers for heat stress. Moreover, a significant decrease in the phagocytic indices and a decrease in both cell adhesion and cell spreading were observed at 25 and 30 °C for L. variegatus. For E. lucunter, the only alteration observed was for the cell proportions. This report shows how different species of sea urchins respond immunologically to rising temperatures. Copyright © 2013 Elsevier Ltd. All rights reserved.

Estuaries as Filters: The Role of Tidal Marshes in Trace Metal Removal

PubMed Central

Teuchies, Johannes; Vandenbruwaene, Wouter; Carpentier, Roos; Bervoets, Lieven; Temmerman, Stijn; Wang, Chen; Maris, Tom; Cox, Tom J. S.; Van Braeckel, Alexander; Meire, Patrick

2013-01-01

Flux calculations demonstrate that many estuaries are natural filters for trace metals. Yet, the underlying processes are poorly investigated. In the present study, it was hypothesized that intertidal marshes contribute significantly to the contaminant filter function of estuaries. Trace metal concentrations and sediment characteristics were measured along a transect from the subtidal, over an intertidal flat and marsh to a restored marsh with controlled reduced tide. Metal concentrations in the intertidal and restored marsh were found to be a factor two to five higher than values in the subtidal and intertidal flat sediments. High metal concentrations and high accretion rates indicate a high metal accumulation capacity of the intertidal marshes. Overbank sedimentation in the tidal marshes of the entire estuary was calculated to remove 25% to 50% of the riverine metal influx, even though marshes comprise less than 8% of the total surface of the estuary. In addition, the large-scale implementation of planned tidal marsh restoration projects was estimated to almost double the trace metal storage capacity of the present natural tidal marshes in the estuary. PMID:23950927

Functional response of an adapted subtidal macrobenthic community to an oil spill: macrobenthic structure and bioturbation activity over time throughout an 18-month field experiment.

PubMed

Gilbert, Franck; Stora, Georges; Cuny, Philippe

2015-10-01

An experimental oil spill was carried out in order to assess in situ responses of a macrobenthic community of shallow subtidal sediments historically exposed to petroleum contamination. Both structural and functional (bioturbation activity) parameters of the community, subjected or not to a pulse acute contamination (25,000 ppm), were studied for 18 months. No difference in the community structure was detected between contaminated and control sediments, from 6 to 18 months of experimentation. Vertical distributions of organisms, however, were affected by the presence of oil contamination leading to a deeper burial of some polychaete species. In the same time, changes in sediment-reworking activity and more especially a deeper particle burying in sediments subjected to acute oil contamination were shown. These results highlight the need to complete the analysis of community structure by assessing functional aspects, such as bioturbation activity, a process integrating various aspects of benthic behaviour (e.g. feeding, locomotion, burrow building) in order to estimate real (structural and functional) and long-term effects of oil contamination on benthic communities.

Depositional framework and sequence stratigraphic aspects of the Coniacian Santonian mixed siliciclastic/carbonate Matulla sediments in Nezzazat and Ekma blocks, Gulf of Suez, Egypt

NASA Astrophysics Data System (ADS)

El-Azabi, M. H.; El-Araby, A.

2007-04-01

Superb outcrops of mixed siliciclastic/carbonate rocks mark the Coniacian-Santonian Matulla Formation exposed in Nezzazat and Ekma blocks, west central Sinai. They are built up of various lithofacies that reflect minor fluctuations in relative sea-level from lower intertidal to slightly deep subtidal settings. Relying on the facies characteristics and stratal geometries, the siliciclastic rocks are divided into seven depositional facies, including beach foreshore laminated sands, upper shoreface cross-bedded sandstone, lower shoreface massive bioturbated and wave-rippled sandstones, shallow subtidal siltstone and deep subtidal shale/claystone. The carbonate rocks comprise lower intertidal lime-mudstone, floatstone and dolostone, shallow subtidal skeletal shoal of oyster rudstone/bioclastic grainstone, and shoal margin packstone. Oolitic grain-ironstone and ferribands are partially intervened the facies types. Deposition has taken place under varied conditions of restricted, partly open marine circulation, low to high wave energy and normal to raised salinity during alternating periods of abundant and ceased clastic supply. The facies types are arranged into asymmetric upward-shallowing cycles that record multiple small-scale transgressive-regressive events. Lime-mudstone and sandstone normally terminate the regressive events. Four sequence boundaries marking regional relative sea-level falls divide the Matulla Formation into three stratigraphic units. These boundaries are Turonian/Coniacian, intra-Coniacian, Coniacian/Santonian and Santonian/Campanian. They do not fit with those sequence boundaries proposed in Haq et al.'s global eustatic curves (1988) except for the sea-level fall associated with the intra-Coniacian boundary. Other sequence boundaries have resulted from regional tectonic impact of the Syrian Arc Fold System that has been initiated in north Egypt during the Latest Turonian-Coniacian. These boundaries enclose three well-defined 3rd order depositional sequences; their enclosing shallowing-upward cycles (i.e. parasequences) record the 4th order relative sea-level fluctuations. 34 and 20 parasequence sets, in the order of a few meters to tens of meters thick, mark the Matulla sequences in Nezzazat and Ekma blocks respectively. Each sequence shows an initial phase of rapid sea-level rise with retrogradational sets, followed by lowering sea-level and progradation/aggradation of the parasequence sets. The transgressive deposits display predominance of deep subtidal lagoonal facies, while highstand deposits show an increase in siliciclastic and carbonate facies with the progressive decrease of lagoonal facies. The sedimentary patterns and environments suggest that the regional, partly eustatic sea-level (i.e. intra-Coniacian) changes controlled the overall architecture of the sequence distribution, whereas changes in the clastic input controlled the variations in facies associations within each depositional sequence.

Effects of sediment discharge from Namibian diamond mines on intertidal and subtidal rocky-reef communities and the rock lobster Jasus lalandii

NASA Astrophysics Data System (ADS)

Pulfrich, Andrea; Branch, George M.

2014-10-01

Extensive terrestrial diamond mining occurs on the southern coast of Namibia, and at Elizabeth Bay near Lüderitz sediment tailings totalling about 2 million tons.yr-1, have been discharged onto the beach. We report here on monitoring spanning 2004-2012 to assess (1) the impacts of increased tailings discharges following an expansion of the mine in 2005, and (2) recovery after discharges halted in 2009. Sampling covered three levels of wave exposure, and compared impacted sites with comparable unmined reference sites. Benthic communities were quantified on both intertidal and subtidal reefs, and kelp densities and rock-lobster abundances, lengths and sex ratios on subtidal reefs. Prior to intensification of mining, deposition of tailings significantly influenced intertidal communities only at sheltered localities where wave action was insufficient to disperse them. Following the mine expansion, effects spread to both semi-exposed and exposed sites. After mining was suspended, recovery of the biota was limited, even three years later. Reductions of intertidal diversity and grazers, proliferation of macroalgae, and increased dominance by filter feeders were recorded at the impacted sites and were persistent, but the affects of wave exposure on community composition generally exceeded those of mining discharges. On subtidal reefs, tailings deposition reduced predators and grazers, increased filter feeders and ephemeral green algae, and decreased all other algae, possibly driven by light reduction due to plumes of suspended fine sediments. Increased discharges post-2005 also substantially influenced bathymetry, wave and current regimes, transforming 2 km of previously wave-exposed rocky coastline into a semi-exposed sandy beach. Tailings discharge appeared to influence community composition in four ways: (1) inundation and blanketing; (2) increased suspended particulate materials; (3) indirect top-down ripple effects, and (4) light reduction. Throughout the period 2004-2007, tailings-deposition had no detectable effects on the sex ratio, sizes or density of rock lobsters, but following suspension of mining activities, densities in 2010-2012 at impact sites exceeded those at reference sites. High natural variability in the abundance of rock lobsters may mask mining impacts, but the data strongly indicate an absence of any negative effects on rock lobsters.

Reconnaissance of intertidal and subtidal zones of Back Island, Behm Canal, Southeast Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strand, J.A.; Young, J.S.

1986-09-01

A diver reconnaissance of the intertidal and subtidal zones of Back Island, Southeast Alaska, was performed May 20-22, 1986. The specific objectives were to catalog potentially vulnerable shellfish, other invertebrates, and plant resources, and to identify potential herring spawning sites. This effort was designed to supplement the existing ecological data base for Back Island that would be used during the National Environmental Policy Act (NEPA) documentation process. A NEPA document will be prepared that describes the site environment and assesses impacts from the proposed construction and operation of the Southeast Alaska Acoustic Measurement Facility (SEAFAC). Nine diver transects were establishedmore » around Back Island. Particular attention was devoted to proposed locations for the pier and float facilities and range-operations and shore-power cable run-ups.« less

Geologic youth of galapagos islands confirmed by marine stratigraphy and paleontology.

PubMed

Hickman, C S; Lipps, J H

1985-03-29

Six distinctive types of fossiliferous marine deposits occur on the Galádpagos Islands that provide evidence for the age of emergence of the islands above sea level and hence a maximum age for the islands' terrestrial biota. These subtidal to supratidal deposits include (i) volcanic tuffs with fossils, (ii) limestones and sandstones interbedded with basalt, (iii) terrace deposits, (iv) beach rock, (v) supratidal talus deposits, and (vi) recently uplifted tidal and subtidal rocks and sand. With the exception of (vi), the deposits were previously assigned ages varying from Miocene to Pleistocene, but all are less than about 2 million years old. This age, together with independently determined geologic ages, indicate that the islands emerged from the sea relatively recently and that all evolution of the islands' unique terrestrial biota occurred within the past 3 to 4 million years.

Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Espínola, Fernando; Dionisi, Hebe M.; Borglin, Sharon

In this work, we analyzed the community structure and metabolic potential of sediment microbial communities in high-latitude coastal environments subjected to low to moderate levels of chronic pollution. Subtidal sediments from four low-energy inlets located in polar and subpolar regions from both Hemispheres were analyzed using large-scale 16S rRNA gene and metagenomic sequencing. Communities showed high diversity (Shannon’s index 6.8 to 10.2), with distinct phylogenetic structures (<40% shared taxa at the Phylum level among regions) but similar metabolic potential in terms of sequences assigned to KOs. Environmental factors (mainly salinity, temperature, and in less extent organic pollution) were drivers ofmore » both phylogenetic and functional traits. Bacterial taxa correlating with hydrocarbon pollution included families of anaerobic or facultative anaerobic lifestyle, such as Desulfuromonadaceae, Geobacteraceae, and Rhodocyclaceae. In accordance, biomarker genes for anaerobic hydrocarbon degradation (bamA, ebdA, bcrA, and bssA) were prevalent, only outnumbered by alkB, and their sequences were taxonomically binned to the same bacterial groups. BssA-assigned metagenomic sequences showed an extremely wide diversity distributed all along the phylogeny known for this gene, including bssA sensu stricto, nmsA, assA, and other clusters from poorly or not yet described variants. This work increases our understanding of microbial community patterns in cold coastal sediments, and highlights the relevance of anaerobic hydrocarbon degradation processes in subtidal environments.« less

Beach recovery capabilities after El Niño 2015–2016 at Ensenada Beach, Northern Baja California

NASA Astrophysics Data System (ADS)

Ruiz de Alegría-Arzaburu, Amaia; Vidal-Ruiz, Jesús Adrián

2018-06-01

This study investigates the recovery capabilities of a single-barred beach in the Pacific Mexican coast before and after the 2015-2016 El Niño winter. Concurrent hydrodynamic and morphological data collected over a 3-year period (August 2014-2017) were analysed to determine the subaerial-subtidal volumetric exchange and cross-shore subtidal sandbar migrations, in relation to the incident wave forcing. The beach presented a seasonal seaward and landward sandbar migration cycle. The sandbar migrated offshore during the energetic waves between November and February, and onshore during the milder wave period in spring, until welding to the subaerial beach around May. The transfer of sediment towards the subaerial section continued over the summer, reaching a complete recovery by September/October. Prior to El Niño, the subaerial beach successfully recovered by the end of summer 2015 through the landward sandbar migration process. The 2015-2016 energetic winter waves caused a subaerial volume loss of 140 m3 m-1 (from October 2015 to March 2016), more than twice the amount eroded in the other winters, and the sandbar moved further offshore and to deeper depths (3-4 m) than the winter before. In addition, the energetic 2015-2016 winter waves lasted for 2 months longer than in other years, making the 2016 spring shorter. Consequently, during the onshore migration, the sandbar was unable of reaching shallow depths, and a large portion of sand remained in the subtidal beach. The subaerial beach recovered 60 and 65% of the loss in the 2016 and 2017 summers, respectively. It is concluded that the landward migration process of the sandbar during the spring is critical to ensure a full subaerial beach recovery over the mild wave period in summer. The recovery capabilities of the subaerial beach will depend on the cross-shore distance and depth where the sandbar is located, and on the duration of mild wave conditions required for the sandbar to migrate onshore.

Cascading Effects of Ocean Acidification in a Rocky Subtidal Community

PubMed Central

Asnaghi, Valentina; Chiantore, Mariachiara; Mangialajo, Luisa; Gazeau, Frédéric; Francour, Patrice; Alliouane, Samir; Gattuso, Jean-Pierre

2013-01-01

Temperate marine rocky habitats may be alternatively characterized by well vegetated macroalgal assemblages or barren grounds, as a consequence of direct and indirect human impacts (e.g. overfishing) and grazing pressure by herbivorous organisms. In future scenarios of ocean acidification, calcifying organisms are expected to be less competitive: among these two key elements of the rocky subtidal food web, coralline algae and sea urchins. In order to highlight how the effects of increased pCO2 on individual calcifying species will be exacerbated by interactions with other trophic levels, we performed an experiment simultaneously testing ocean acidification effects on primary producers (calcifying and non-calcifying algae) and their grazers (sea urchins). Artificial communities, composed by juveniles of the sea urchin Paracentrotus lividus and calcifying (Corallina elongata) and non-calcifying (Cystoseira amentacea var stricta, Dictyota dichotoma) macroalgae, were subjected to pCO2 levels of 390, 550, 750 and 1000 µatm in the laboratory. Our study highlighted a direct pCO2 effect on coralline algae and on sea urchin defense from predation (test robustness). There was no direct effect on the non-calcifying macroalgae. More interestingly, we highlighted diet-mediated effects on test robustness and on the Aristotle's lantern size. In a future scenario of ocean acidification a decrease of sea urchins' density is expected, due to lower defense from predation, as a direct consequence of pH decrease, and to a reduced availability of calcifying macroalgae, important component of urchins' diet. The effects of ocean acidification may therefore be contrasting on well vegetated macroalgal assemblages and barren grounds: in the absence of other human impacts, a decrease of biodiversity can be predicted in vegetated macroalgal assemblages, whereas a lower density of sea urchin could help the recovery of shallow subtidal rocky areas affected by overfishing from barren grounds to assemblages dominated by fleshy macroalgae. PMID:23613994

Cascading effects of ocean acidification in a rocky subtidal community.

PubMed

Asnaghi, Valentina; Chiantore, Mariachiara; Mangialajo, Luisa; Gazeau, Frédéric; Francour, Patrice; Alliouane, Samir; Gattuso, Jean-Pierre

2013-01-01

Temperate marine rocky habitats may be alternatively characterized by well vegetated macroalgal assemblages or barren grounds, as a consequence of direct and indirect human impacts (e.g. overfishing) and grazing pressure by herbivorous organisms. In future scenarios of ocean acidification, calcifying organisms are expected to be less competitive: among these two key elements of the rocky subtidal food web, coralline algae and sea urchins. In order to highlight how the effects of increased pCO2 on individual calcifying species will be exacerbated by interactions with other trophic levels, we performed an experiment simultaneously testing ocean acidification effects on primary producers (calcifying and non-calcifying algae) and their grazers (sea urchins). Artificial communities, composed by juveniles of the sea urchin Paracentrotus lividus and calcifying (Corallina elongata) and non-calcifying (Cystoseira amentacea var stricta, Dictyota dichotoma) macroalgae, were subjected to pCO2 levels of 390, 550, 750 and 1000 µatm in the laboratory. Our study highlighted a direct pCO2 effect on coralline algae and on sea urchin defense from predation (test robustness). There was no direct effect on the non-calcifying macroalgae. More interestingly, we highlighted diet-mediated effects on test robustness and on the Aristotle's lantern size. In a future scenario of ocean acidification a decrease of sea urchins' density is expected, due to lower defense from predation, as a direct consequence of pH decrease, and to a reduced availability of calcifying macroalgae, important component of urchins' diet. The effects of ocean acidification may therefore be contrasting on well vegetated macroalgal assemblages and barren grounds: in the absence of other human impacts, a decrease of biodiversity can be predicted in vegetated macroalgal assemblages, whereas a lower density of sea urchin could help the recovery of shallow subtidal rocky areas affected by overfishing from barren grounds to assemblages dominated by fleshy macroalgae.

Beach recovery capabilities after El Niño 2015-2016 at Ensenada Beach, Northern Baja California

NASA Astrophysics Data System (ADS)

Ruiz de Alegría-Arzaburu, Amaia; Vidal-Ruiz, Jesús Adrián

2018-05-01

This study investigates the recovery capabilities of a single-barred beach in the Pacific Mexican coast before and after the 2015-2016 El Niño winter. Concurrent hydrodynamic and morphological data collected over a 3-year period (August 2014-2017) were analysed to determine the subaerial-subtidal volumetric exchange and cross-shore subtidal sandbar migrations, in relation to the incident wave forcing. The beach presented a seasonal seaward and landward sandbar migration cycle. The sandbar migrated offshore during the energetic waves between November and February, and onshore during the milder wave period in spring, until welding to the subaerial beach around May. The transfer of sediment towards the subaerial section continued over the summer, reaching a complete recovery by September/October. Prior to El Niño, the subaerial beach successfully recovered by the end of summer 2015 through the landward sandbar migration process. The 2015-2016 energetic winter waves caused a subaerial volume loss of 140 m3 m-1 (from October 2015 to March 2016), more than twice the amount eroded in the other winters, and the sandbar moved further offshore and to deeper depths (3-4 m) than the winter before. In addition, the energetic 2015-2016 winter waves lasted for 2 months longer than in other years, making the 2016 spring shorter. Consequently, during the onshore migration, the sandbar was unable of reaching shallow depths, and a large portion of sand remained in the subtidal beach. The subaerial beach recovered 60 and 65% of the loss in the 2016 and 2017 summers, respectively. It is concluded that the landward migration process of the sandbar during the spring is critical to ensure a full subaerial beach recovery over the mild wave period in summer. The recovery capabilities of the subaerial beach will depend on the cross-shore distance and depth where the sandbar is located, and on the duration of mild wave conditions required for the sandbar to migrate onshore.

Causations of phylogeographic barrier of some rocky shore species along the Chinese coastline.

PubMed

Wang, Jie; Tsang, Ling Ming; Dong, Yun-Wei

2015-06-15

Substrate, ocean current and freshwater discharge are recognized as important factors that control the larval dispersal and recruitment of intertidal species. Life history traits of individual species will determine the differential responses to these physical factors, and hence resulting in contrasting phylogeography across the same biogeographic barrier. To determine how these factors affect genetic structure of rocky shore species along the China coast, a comparative phylogeographic study of four intertidal and subtidal species was conducted using mitochondrial and nuclear DNA by combining new sequences from Siphonaria japonica with previously published sequences from three species (Cellana toreuma, Sargassum horneri and Atrina pectinata). Analysis of molecular variance and pairwise ΦST revealed significant genetic differences between the Yellow Sea (YS) and the other two marginal seas (East China Sea, ECS and South China Sea, SCS) for rocky-shore species (S. japonica, C. toreuma, S. horneri), but not for muddy-shore species Atrina pectinata. Demographic history analysis proved that the population size of all these four species were persistent though the Last Glacial Maximum (LGM, ~20 ka BP). Migration analysis revealed that gene flow differentiated northward and southward migration for these four species. However, the inferred direction of gene flow using alternatively mitochondrial or nuclear markers was contradictory in S. japonica. It is concluded that there is a phylogeographical break at the Yangtze River estuary for the rocky shore species and the causation of the barrier is mainly due to the unsuitable substratum and freshwater discharge. All four intertidal and subtidal species appear to have persisted through the LGM in China, indicating the lower impact of LGM on intertidal and subtidal species than generally anticipated. The imbalanced gene flow between YS and ESCS groups for these four species could be explained by historical refugia. The discordance between mitochondrial and nuclear markers in the MIGRATE analysis of S. japonica prove the importance of employing multi-locus data in biogeographic study. Climate change, land reclamation and dam construction, which are changing substrate and hydrological conditions around Yangtze River estuary, will consequently affect the biogeographic pattern of intertidal species.

Facies analysis of Lofer cycles (Upper Triassic), in the Argolis Peninsula (Greece)

NASA Astrophysics Data System (ADS)

Pomoni-Papaioannou, F.

The Upper Triassic carbonate sediments of Argolis Peninsula are part of the Upper Triassic-Lower Jurassic extensive and thick neritic carbonate formations (Pantokrator facies) that formed at the passive Pelagonian margin and are considered as Dachstein-type platform carbonates. Facies analysis of the Upper Triassic "Lofer-type" lagoonal-peritidal cycles in the Dhidimi area, proved that cycles, although mostly incomplete, were regressive shallowing-upward. The ideal elementary cyclothems are meter-scale in thickness and begin with a subtidal bed (Member C), represented by a peloidal dolostone with megalodonts (wackestone or packstone), being followed by a stromatolitic intertidal dolomitic mudstone and/or fenestral intertidal dolomitic mudstone (Member B) that is overlain by dolocrete (terrestrial stromatolites or pisoidic dolomite) or a supratidal "soil conglomerate" in red micritic matrix (Member A). Lofer-cycle boundaries are defined at the erosional surfaces and accordingly the Lofer cyclothems are unconformity-bounded units. Due to common post-depositional truncation of the subtidal and intertidal facies, the supratidal members prevail, being developed, in places, directly upon subaerial exposure surfaces (erosionally reduced cyclothems). Peritidal layers are characterized by a well-expressed lamination, sheet cracks, tepee structures, fenestral pores and karst dissolution cavities. The studied lagoonal-peritidal cycles are considered to have been deposited in a tidal-flat setting (inner platform), repeatedly exposed under subaerial conditions, in the context of a broader tropical rimmed platform. Although the studied area was tectonically active due to rift-activity and the autocyclic processes should also be taken in consideration, the great lateral correlatability of cycles, the facies shifting and the widespread erosion that resulted in superposition of supratidal-pedogenic facies directly upon subtidal members (subaerial erosional unconformity), indicating a sea-level drop, reflect allocyclic control via high-frequency eustatic sea-level oscillation (orbital forcing). Sediment deposition occurred during low-stand system tract (LST), that probably continued also in the transgressive system tract (TST) and reflects an overall sea-level fall. Under these conditions dissolution and cement precipitation episodes, as well development of paleosols and karsts, were triggered, during a relatively less arid interval.

Ecological periodic tables for benthic macrofaunal usage of estuarine habitats: Insights from a case study in Tillamook Bay, Oregon, USA

NASA Astrophysics Data System (ADS)

Ferraro, Steven P.; Cole, Faith A.

2012-05-01

This study validates the ecological relevance of estuarine habitat types to the benthic macrofaunal community and, together with previous similar studies, suggests they can serve as elements in ecological periodic tables of benthic macrofaunal usage in the bioregion. We compared benthic macrofaunal Bray-Curtis similarity and the means of eight benthic macrofaunal community measures across seven habitat types in Tillamook Bay, Oregon, USA: intertidal eelgrass (Zostera marina), dwarf eelgrass (Zostera japonica), oyster (Crassostrea gigas) ground culture, burrowing mud shrimp (Upogebia pugettensis), burrowing ghost shrimp (Neotrypaea californiensis), sand and subtidal. Benthic macrofaunal Bray-Curtis similarity differed among all the habitats except ghost shrimp and sand. The habitat rank order on mean benthic macrofaunal species richness, abundance and biomass was dwarf eelgrass ≈ oyster ≥ mud shrimp ≈ eelgrass > sand ≈ ghost shrimp ≈ subtidal. The benthic macrofaunal habitat usage pattern in Tillamook Bay was, with a few exceptions, similar to that in two other US Pacific Northwest estuaries. The exceptions indicate variants of eelgrass and ghost shrimp habitat that differ in benthic macrofaunal usage perhaps due to differences in the coarseness of the sand fraction of the sediments in which they live. The similarities indicate periodic benthic macrofaunal usage patterns across the other habitat types extend over a wider geographic scale and range of environmental conditions than previously known.

Temporal pattern of foraging and microhabitat use by Galápagos marine iguanas, Amblyrhynchus cristatus.

PubMed

Buttemer, William A; Dawson, William R

1993-10-01

We observed a colony of marine iguanas (Amblyrhynchus cristatus) on Isla Fernandina, Galápagos, Ecuador, while measuring local micrometeorological and tidal conditions. We found size-related differences in foraging mode, with smaller iguanas feeding intertidally during daytime low tides and larger iguanas feeding subtidally. Despite having greater opportunity, subtidal foragers did not time their foraging bouts or exploit their environment in ways that optimized their period at high body temperature. Instead, the foraging schedule of these iguanas served to maximize their rate of rewarming following emergence from the cool sea. Intertidal feeders, by contrast, showed much greater behavioral flexibility in attempting to exploit their thermal environment. We suggest that size-ordered differences in marine iguana thermoregulatory behavior reflect underlying ontogenetic changes in costs and benefits of thermoregulation due to differences in predator pressure, quantity of food and electrolytes taken at each feeding, mode of foraging, and agonistic tendencies.

Monitoring of Olympic National Park Beaches to determine fate and effects of spilled bunker C fuel oil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strand, J.A.; Cullinan, V.I.; Crecelius, E.A.

1990-10-01

On December 23, 1988, the barge Nestucca was accidentally struck by its tow, a Souse Brothers Towing Company tug, releasing approximately 230,000 gallons of Bunker C fuel oil and fouling beaches from Grays Harbor north to Vancouver Island. Affected beaches in Washington included a 40-mile-long strip that has been recently added to Olympic National Park. The purpose of the monitoring program documented in this report was to determine the fate of spilled Bunker C fuel oil on selected Washington coastal beaches. We sought to determine (1) how much oil remained in intertidal and shallow subtidal habitats following clean-up and weathering,more » (2) to what extent intertidal and/or shallow subtidal biotic assemblages have been contaminated, and (3) how rapidly the oil has left the ecosystem. 45 refs., 18 figs., 8 tabs.« less

High Spatio-Temporal Resolution Bathymetry Estimation and Morphology

NASA Astrophysics Data System (ADS)

Bergsma, E. W. J.; Conley, D. C.; Davidson, M. A.; O'Hare, T. J.

2015-12-01

In recent years, bathymetry estimates using video images have become increasingly accurate. With the cBathy code (Holman et al., 2013) fully operational, bathymetry results with 0.5 metres accuracy have been regularly obtained at Duck, USA. cBathy is based on observations of the dominant frequencies and wavelengths of surface wave motions and estimates the depth (and hence allows inference of bathymetry profiles) based on linear wave theory. Despite the good performance at Duck, large discrepancies were found related to tidal elevation and camera height (Bergsma et al., 2014) and on the camera boundaries. A tide dependent floating pixel and camera boundary solution have been proposed to overcome these issues (Bergsma et al., under review). The video-data collection is set estimate depths hourly on a grid with resolution in the order of 10x25 meters. Here, the application of the cBathy at Porthtowan in the South-West of England is presented. Hourly depth estimates are combined and analysed over a period of 1.5 years (2013-2014). In this work the focus is on the sub-tidal region, where the best cBathy results are achieved. The morphology of the sub-tidal bar is tracked with high spatio-temporal resolution on short and longer time scales. Furthermore, the impact of the storm and reset (sudden and large changes in bathymetry) of the sub-tidal area is clearly captured with the depth estimations. This application shows that the high spatio-temporal resolution of cBathy makes it a powerful tool for coastal research and coastal zone management.

Calculating bathymetric and spatial distributions of estuarine eelgrass

EPA Science Inventory

Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon estuaries (Tillamook, Yaquina, and Alsea) were classified from color infrared aerial orthophotography acquired at extreme low tide. Image processing software, Spati...

MAPPING BURROWING SHRIMP AND SEAGRASS IN YAQUINA ESTUARY

EPA Science Inventory

Burrowing shrimp and seagrasses create extensive intertidal and shallow subtidal habitats within Pacific NW estuaries. Maps of their populations are useful to inform estuarine managers of locations that deserve special consideration for conservation, and to inform oyster farmers...

Structuring factors and recent changes in subtidal macrozoobenthic communities of a coastal lagoon, Arcachon Bay (France)

NASA Astrophysics Data System (ADS)

Blanchet, Hugues; de Montaudouin, Xavier; Chardy, Pierre; Bachelet, Guy

2005-09-01

Fourteen years after a previous investigation in Arcachon Bay (SW France), the quantitative distribution of subtidal macrozoobenthic communities was assessed in 2002 through a stratified sampling strategy involving a larger number of stations (89 vs. 18) than in 1988. A total of 226 taxa were recorded. Cluster Analysis and Correspondence Analysis identified nine station groups corresponding to benthic faunal assemblages and their characteristic species. Multiple Discriminant Analysis showed that the main environmental factors influencing the distribution of faunal assemblages were sediment parameters and distance from the ocean. Depth was a minor structuring factor. At the scale of the lagoon, biogenic structures such as Zostera marina beds, Crepidula fornicata-dominated bottoms or dead oyster shell bottoms did not display any particular assemblage of infauna. Comparison with previous quantitative data from the 1988 survey provided more precision on the distribution of benthic assemblages and revealed community changes at a 14-year scale. These modifications reflected a general increase of silt and clay content in the sediment in the internal parts of channels, inducing community change. These changes can be correlated to the recent first signs of a moderate eutrophication process which have appeared, since 1988, through the development of green macroalgae in some parts of the lagoon. This trend was enhanced in transverse channels with reduced hydrodynamics and led to muddy areas where green macroalgae tended to accumulate. Locally, the dredging of sandbanks induced stronger currents and allowed the marine influence to occur, and also induced community change. These observations confirm that surveys of macrobenthic communities are useful tools to assess coastal ecosystem change even in moderately disturbed environments.

HABITAT ASSESSMENT MODELS FOR BAY SCALLOP, ARGOPECTEN IRRADIANS

EPA Science Inventory

Bay scallops (Argopecten irradians) inhabit shallow subtidal habitats along the Atlantic coast of the United States and require settlement substrates, such as submerged aquatic vegetation (SAV), for their early juvenile stages. The short lifespan of bay scallops (1-2 yr) coupled...

Hydrodynamic conditioning of diversity and functional traits in subtidal estuarine macrozoobenthic communities

NASA Astrophysics Data System (ADS)

van der Wal, Daphne; Lambert, Gwladys I.; Ysebaert, Tom; Plancke, Yves M. G.; Herman, Peter M. J.

2017-10-01

Variations in abundance and diversity of estuarine benthic macrofauna are typically described along the salinity gradient. The influence of gradients in water depth, hydrodynamic energy and sediment properties are less well known. We studied how these variables influence the distribution of subtidal macrofauna in the polyhaline zone of a temperate estuary (Westerschelde, SW Netherlands). Macrofauna density, biomass and species richness, combined in a so-called ecological richness, decreased with current velocities and median grain-size and increased with organic carbon of the sediment, in total explaining 39% of the variation. The macrofauna community composition was less well explained by the three environmental variables (approx. 12-15% in total, with current velocity explaining approx. 8%). Salinity, water depth and distance to the intertidal zone had a very limited effect on both ecological richness and the macrofauna community. The proportion of (surface) deposit feeders (including opportunistic species), decreased relative to that of omnivores and carnivores with increasing current velocity and sediment grain-size. In parallel, the proportion of burrowing sessile benthic species decreased relative to that of mobile benthic species that are able to swim. Correspondingly, spatial variations in hydrodynamics yielded distinct hotspots and coldspots in ecological richness. The findings highlight the importance of local hydrodynamic conditions for estuarine restoration and conservation. The study provides a tool based on a hydrodynamic model to assess and predict ecological richness in estuaries.

Light Limitation within Southern New Zealand Kelp Forest Communities

PubMed Central

Desmond, Matthew J.; Pritchard, Daniel W.; Hepburn, Christopher D.

2015-01-01

Light is the fundamental driver of primary productivity in the marine environment. Reduced light availability has the potential to alter the distribution, community composition, and productivity of key benthic primary producers, potentially reducing habitat and energy provision to coastal food webs. We compared the underwater light environment of macroalgal dominated shallow subtidal rocky reef habitats on a coastline modified by human activities with a coastline of forested catchments. Key metrics describing the availability of photosynthetically active radiation (PAR) were determined over 295 days and were related to macroalgal depth distribution, community composition, and standing biomass patterns, which were recorded seasonally. Light attenuation was more than twice as high in shallow subtidal zones along the modified coast. Macroalgal biomass was 2–5 times greater within forested sites, and even in shallow water (2m) a significant difference in biomass was observed. Long-term light dose provided the best explanation for differences in observed biomass between modified and forested coasts, with light availability over the study period differing by 60 and 90 mol photons m−2 at 2 and 10 metres, respectively. Higher biomass on the forested coast was driven by the presence of larger individuals rather than species diversity or density. This study suggests that commonly used metrics such as species diversity and density are not as sensitive as direct measures of biomass when detecting the effects of light limitation within macroalgal communities. PMID:25902185

Comparison of the oropharyngeal cavity in the Starksiini (Teleostei: Blenniiformes: Labrisomidae): taste buds and teeth, including a comparison with closely-related genera.

PubMed

Fishelson, Lev; Baldwin, Carole C; Hastings, Philip A

2012-06-01

The present study describes the distribution of taste buds and teeth in the oropharyngeal cavity of 13 species of adult (18-60 mm SL) Starksiini fishes inhabiting subtidal waters of the Neotropical region. Four types of taste buds described previously in other fish groups were observed within the oropharyngeal cavity, of which type I, situated on prominent protruding papillae, is the most common. The number of taste buds in this cavity varies considerably, ranging from ca. 202 in Starksia lepicoelia to ca. 770 in S. sluiteri. In all the studied species, taste buds are more numerous on the posterior (160-396) than on the anterior (42-294) part of the oropharyngeal cavity. The presence of different numbers of taste buds in different Starksiini species of the same standard length suggests that numbers of taste buds are not directly correlated with size and may be species-specific. Teeth are found on the premaxilla, dentary, vomer, palatine (in some species) and the upper and lower pharyngeal jaws (third pharyngobranchials and fifth ceratobranchials, respectively); the form and number of teeth and taste buds on each of these sites differs among the various species of Starksiini and between them and closely related species of the labrisomid tribes Labrisomini, Mnierpini, and Paraclinini. The results thus suggest potential systematic value in certain features of the oropharyngeal cavity for blenniiform fishes. It is also shown that benthic-feeding omnivorous fishes have higher densities of taste buds than piscivorous fishes. A possible correlation among numbers of taste buds, their positions in the oropharyngeal cavity, and other parameters is discussed. Copyright © 2012 Wiley Periodicals, Inc.

Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta

PubMed Central

Lv, Xiaofei; Ma, Bin; Yu, Junbao; Chang, Scott X.; Xu, Jianming; Li, Yunzhao; Wang, Guangmei; Han, Guangxuan; Bo, Guan; Chu, Xiaojing

2016-01-01

Coastal ecosystems play significant ecological and economic roles but are threatened and facing decline. Microbes drive various biogeochemical processes in coastal ecosystems. Tidal flats are critical components of coastal ecosystems; however, the structure and function of microbial communities in tidal flats are poorly understood. Here we investigated the seasonal variations of bacterial communities along a tidal flat series (subtidal, intertidal and supratidal flats) and the factors affecting the variations. Bacterial community composition and diversity were analyzed over four seasons by 16S rRNA genes using the Ion Torrent PGM platform. Bacterial community composition differed significantly along the tidal flat series. Bacterial phylogenetic diversity increased while phylogenetic turnover decreased from subtidal to supratidal flats. Moreover, the bacterial community structure differed seasonally. Canonical correspondence analysis identified salinity as a major environmental factor structuring the microbial community in the sediment along the successional series. Meanwhile, temperature and nitrite concentration were major drivers of seasonal microbial changes. Despite major compositional shifts, nitrogen, methane and energy metabolisms predicted by PICRUSt were inhibited in the winter. Taken together, this study indicates that bacterial community structure changed along the successional tidal flat series and provides new insights on the characteristics of bacterial communities in coastal ecosystems. PMID:27824160

Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta.

PubMed

Lv, Xiaofei; Ma, Bin; Yu, Junbao; Chang, Scott X; Xu, Jianming; Li, Yunzhao; Wang, Guangmei; Han, Guangxuan; Bo, Guan; Chu, Xiaojing

2016-11-08

Coastal ecosystems play significant ecological and economic roles but are threatened and facing decline. Microbes drive various biogeochemical processes in coastal ecosystems. Tidal flats are critical components of coastal ecosystems; however, the structure and function of microbial communities in tidal flats are poorly understood. Here we investigated the seasonal variations of bacterial communities along a tidal flat series (subtidal, intertidal and supratidal flats) and the factors affecting the variations. Bacterial community composition and diversity were analyzed over four seasons by 16S rRNA genes using the Ion Torrent PGM platform. Bacterial community composition differed significantly along the tidal flat series. Bacterial phylogenetic diversity increased while phylogenetic turnover decreased from subtidal to supratidal flats. Moreover, the bacterial community structure differed seasonally. Canonical correspondence analysis identified salinity as a major environmental factor structuring the microbial community in the sediment along the successional series. Meanwhile, temperature and nitrite concentration were major drivers of seasonal microbial changes. Despite major compositional shifts, nitrogen, methane and energy metabolisms predicted by PICRUSt were inhibited in the winter. Taken together, this study indicates that bacterial community structure changed along the successional tidal flat series and provides new insights on the characteristics of bacterial communities in coastal ecosystems.

Physiological Responses in a Variable Environment: Relationships between Metabolism, Hsp and Thermotolerance in an Intertidal-Subtidal Species

PubMed Central

Wang, Qing-lin; Dong, Shuang-lin

2011-01-01

Physiological responses to temperature reflect the evolutionary adaptations of organisms to their thermal environment and the capability of animals to tolerate thermal stress. Contrary to conventional metabolism theory, increasing environmental temperatures have been shown to reduce metabolic rate in rocky–eulittoral-fringe species inhabiting highly variable environments, possibly as a strategy for energy conservation. To study the physiological adaptations of an intertidal-subtidal species to the extreme and unpredictable heat stress of the intertidal zone, oxygen consumption rate and heat shock protein expression were quantified in the sea cucumber Apostichopus japonicus. Using simulate natural temperatures, the relationship between temperature, physiological performance (oxygen consumption and heat shock proteins) and thermotolerance were assessed. Depression of oxygen consumption rate and upregulation of heat shock protein genes (hsps) occurred in sequence when ambient temperature was increased from 24 to 30°C. Large-scale mortality of the sea cucumber occurred when temperatures rose beyond 30°C, suggesting that the upregulation of heat shock proteins and mortality are closely related to the depression of aerobic metabolism, a phenomenon that is in line with the concept of oxygen- and capacity-limited thermal tolerance (OCLTT). The physiologically-related thermotolerance of this sea cucumber should be an adaptation to its local environment. PMID:22022615

Regional-scale analysis of subtidal rocky shore community

NASA Astrophysics Data System (ADS)

Derrien-Courtel, Sandrine; Le Gal, Aodren; Grall, Jacques

2013-12-01

The French monitoring network, REseau BENThique (REBENT), was launched by the Ministry of the Environment in 2003 following the 1999 Erika oil spill. REBENT aimed to acquire baseline knowledge of coastal benthic habitat distributions with a special focus on biological diversity. This study analyzed data from 38 subtidal rocky reef sites collected by a single diving team of marine biologists along the coast of Brittany from 2004 to 2010. At each site, the depth limits of the algal belts were determined between 0 and -40 m Chart Datum (CD); the flora and fauna compositions and abundances were sampled at -3 and -8 m CD. A total of 364 taxa (156 flora and 208 fauna), belonging to 12 phyla, were identified. The results showed that the depth limit and density of kelp beds increased as water turbidity decreased; moreover, several changes in community structure could be related to water turbidity and temperature. Thus, northern and southern Brittany showed strong differences in diversity and structure of the dominant kelp species ( Laminaria hyperborea and Saccorhiza polyschides). The results from this kelp habitat composition survey (dominant kelp species and indicator species) provided important information for local pressure assessments, like increases in turbidity. The data also provided a reference that could be useful for detecting changes in coastal water temperatures due to global warming.

Effects of shoreline discharge of iron mine tailings on a marine soft-bottom community in northern Chile.

PubMed

Lancellotti, D A; Stotz, W B

2004-02-01

This study evaluates the magnitude and extension of the impact produced by the discharge of inert allochthonous materials, including clays and particulate iron, on macrobenthic soft-bottom assemblages in the subtidal zone of a coastal bay in north-central Chile. An average of 118 Ton h(-1) of finely divided solids were discharged into the rocky intertidal zone of the bay for a period of over 16 years, producing continuous turbidity in the water column and sedimentation in the subtidal zone. Data obtained four months before cessation of the discharge showed that the macrofauna present at 20 and 50 m depth in the bay suffered an important decrease in abundance and species richness, low diversity/high dominance, and deep changes in community structure related to the discharge. The faunal assemblages present at 110 m depth did not show effects from the discharge, suggesting that the impact was limited to the inner part of the bay. The impoverished faunal aggregates at 20 and 50 m depth showed exclusive domination by the Lumbrineris bifilaris (polychaete)-Diastylis tongoyensis (cumacean) association, representing a simple trophic guild of deposit feeders. The complete absence of opportunistic species such as capitellid, spionid, and/or cirratulid polychaetes may be associated with the turbidity and sedimentation levels in the bay.

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities

PubMed Central

Foley, Melissa M.; Berry, Helen D.; Duda, Jeffrey J.; Hudson, Benjamin; Elder, Nancy E.; Beirne, Matthew M.; Warrick, Jonathan A.; McHenry, Michael L.; Stevens, Andrew W.; Eidam, Emily F.; Ogston, Andrea S.; Gelfenbaum, Guy; Pedersen, Rob

2017-01-01

The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx—over 10 million tonnes—during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth). Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities. PMID:29220368

Cross-shelf transport into nearshore waters due to shoaling internal tides in San Pedro Bay, CA

USGS Publications Warehouse

Noble, Marlene A.; Burt Jones,; Peter Hamilton,; Xu, Jingping; George Robertson,; Rosenfeld, Leslie; John Largier,

2009-01-01

In the summer of 2001, a coastal ocean measurement program in the southeastern portion of San Pedro Bay, CA, was designed and carried out. One aim of the program was to determine the strength and effectiveness of local cross-shelf transport processes. A particular objective was to assess the ability of semidiurnal internal tidal currents to move suspended material a net distance across the shelf. Hence, a dense array of moorings was deployed across the shelf to monitor the transport patterns associated with fluctuations in currents, temperature and salinity. An associated hydrographic program periodically monitored synoptic changes in the spatial patterns of temperature, salinity, nutrients and bacteria. This set of measurements show that a series of energetic internal tides can, but do not always, transport subthermocline water, dissolved and suspended material from the middle of the shelf into the surfzone. Effective cross-shelf transport occurs only when (1) internal tides at the shelf break are strong and (2) subtidal currents flow strongly downcoast. The subtidal downcoast flow causes isotherms to tilt upward toward the coast, which allows energetic, nonlinear internal tidal currents to carry subthermocline waters into the surfzone. During these events, which may last for several days, the transported water remains in the surfzone until the internal tidal current pulses and/or the downcoast subtidal currents disappear. This nonlinear internal tide cross-shelf transport process was capable of carrying water and the associated suspended or dissolved material from the mid-shelf into the surfzone, but there were no observation of transport from the shelf break into the surfzone. Dissolved nutrients and suspended particulates (such as phytoplankton) transported from the mid-shelf into the nearshore region by nonlinear internal tides may contribute to nearshore algal blooms, including harmful algal blooms that occur off local beaches.

Using particle dispersal models to assist in the conservation and recovery of the overexploited native oyster (Ostrea edulis) in an enclosed sea lough

NASA Astrophysics Data System (ADS)

Smyth, David; Kregting, Louise; Elsäßer, Björn; Kennedy, Richard; Roberts, Dai

2016-02-01

Oyster populations around the world have seen catastrophic decline which has been largely attributed to overexploitation, disease and pollution. While considerable effort and resources have been implemented into restoring these important environmental engineers, the success of oyster populations is often limited by poor understanding of site-specific dispersal patterns of propagules. Water-borne transport is a key factor controlling or regulating the dispersal of the larval stage of benthic marine invertebrates which have limited mobility. The distribution of the native oyster Ostrea edulis in Strangford Lough, Northern Ireland, together with their densities and population structure at subtidal and intertidal sites has been documented at irregular intervals between 1997 and 2013. This paper revisits this historical data and considers whether different prevailing environmental conditions can be used to explain the distribution, densities and population structure of O. edulis in Strangford Lough. The approach adopted involved comparing predictive 2D hydrodynamic models coupled with particle tracking to simulate the dispersal of oyster larvae with historical and recent field records of the distribution of both subtidal and intertidal, populations since 1995. Results from the models support the hypothesis that commercial stocks of O. edulis introduced into Strangford Lough in the 1990s resulted in the re-establishment of wild populations of oysters in the Northern Basin which in turn provided a potential source of propagules for subtidal populations. These results highlight that strategic site selection (while inadvertent in the case of the introduced population in 1995) for the re-introduction of important shellfish species can significantly accelerate their recovery and restoration.

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities.

PubMed

Rubin, Stephen P; Miller, Ian M; Foley, Melissa M; Berry, Helen D; Duda, Jeffrey J; Hudson, Benjamin; Elder, Nancy E; Beirne, Matthew M; Warrick, Jonathan A; McHenry, Michael L; Stevens, Andrew W; Eidam, Emily F; Ogston, Andrea S; Gelfenbaum, Guy; Pedersen, Rob

2017-01-01

The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx-over 10 million tonnes-during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth). Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities.

Subtidal sea level variability in a shallow Mississippi River deltaic estuary, Louisiana

USGS Publications Warehouse

Snedden, G.A.; Cable, J.E.; Wiseman, W.J.

2007-01-01

The relative roles of river, atmospheric, and tidal forcings on estuarine sea level variability are examined in Breton Sound, a shallow (0.7 m) deltaic estuary situated in an interdistributary basin on the Mississippi River deltaic plain. The deltaic landscape contains vegetated marshes, tidal flats, circuitous channels, and other features that frictionally dissipate waves propagating through the system. Direct forcing by local wind stress over the surface of the estuary is minimal, owing to the lack of significant fetch due to landscape features of the estuary. Atmospheric forcing occurs almost entirely through remote forcing, where alongshore winds facilitate estuary-shelf exchange through coastal Ekman convergence. The highly frictional nature of the deltaic landscape causes the estuary to act as a low-pass filter to remote atmospheric forcing, where high-frequency, coastally-induced fluctuations are significantly damped, and the damping increases with distance from the estuary mouth. During spring, when substantial quantities of controlled Mississippi River inputs (q?? = 62 m3 s-1) are discharged into the estuary, upper estuary subtidal sea levels are forced by a combination of river and remote atmospheric forcings, while river effects are less clear downestuary. During autumn (q?? = 7 m3 s-1) sea level variability throughout the estuary is governed entirely by coastal variations at the marine boundary. A frequency-dependent analytical model, previously used to describe sea level dynamics forced by local wind stress and coastal forcing in deeper, less frictional systems, is applied in the shallow Breton Sound estuary. In contrast to deeper systems where coastally-induced fluctuations exhibit little or no frictional attenuation inside the estuary, these fluctuations in the shallow Breton Sound estuary show strong frequency-dependent amplitude reductions that extend well into the subtidal frequency spectrum. ?? 2007 Estuarine Research Federation.

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities

USGS Publications Warehouse

Rubin, Stephen P.; Miller, Ian M.; Foley, Melissa M.; Berry, Helen D.; Duda, Jeffrey J.; Hudson, Benjamin; Elder, Nancy E.; Beirne, Matthew M.; Warrick, Jonathan; McHenry, Michael L.; Stevens, Andrew; Eidam, Emily; Ogston, Andrea; Gelfenbaum, Guy R.; Pedersen, Rob

2017-01-01

The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx—over 10 million tonnes—during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth). Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities.

50 CFR 226.221 - Critical habitat for black abalone (Haliotis cracherodii).

Code of Federal Regulations, 2012 CFR

2012-10-01

... resources. Abundant food resources including bacterial and diatom films, crustose coralline algae, and a...) Juvenile settlement habitat. Rocky intertidal and subtidal habitat containing crustose coralline algae and... crustose coralline algae, outcompeting encrusting sessile invertebrates (e.g. tube worms and tube snails...

50 CFR 226.221 - Critical habitat for black abalone (Haliotis cracherodii).

Code of Federal Regulations, 2013 CFR

2013-10-01

... resources. Abundant food resources including bacterial and diatom films, crustose coralline algae, and a...) Juvenile settlement habitat. Rocky intertidal and subtidal habitat containing crustose coralline algae and... crustose coralline algae, outcompeting encrusting sessile invertebrates (e.g. tube worms and tube snails...

50 CFR 226.221 - Critical habitat for black abalone (Haliotis cracherodii).

Code of Federal Regulations, 2014 CFR

2014-10-01

... resources. Abundant food resources including bacterial and diatom films, crustose coralline algae, and a...) Juvenile settlement habitat. Rocky intertidal and subtidal habitat containing crustose coralline algae and... crustose coralline algae, outcompeting encrusting sessile invertebrates (e.g. tube worms and tube snails...

MODELING HOW A HURRICANE BARRIER IN NEW BEDFORD HARBOR, MASSACHUSETTS, AFFECTS THE HYDRODYNAMICS AND RESIDENCE TIMES

EPA Science Inventory

Two-dimensional hydrodynamic and transport models were used to simulate tidal and subtidal circulation, residence times, and the longitudinal distributions of conservative constituents in New Bedford Harbor, Massachusetts, before and after a hurricane barrier was constructed. The...

The bathymetric distribution of intertidal eelgrass Zostera marina L. in three coastal estuaries of Oregon

EPA Science Inventory

Distributions of native eelgrass Zostera marina L. within the intertidal and shallow subtidal zones of three Oregon coastal estuaries (Tillamook, Yaquina, and Alsea) were determined by digital classification of aerial color infrared (CIR) orthophotographs. Stratified random surv...

Impacts of the 2011 tsunami on the subtidal polychaete assemblage and the following recolonization in Onagawa Bay, northeastern Japan.

PubMed

Abe, Hirokazu; Kobayashi, Genki; Sato-Okoshi, Waka

2015-12-01

The ecological impacts of the 2011 Great East Japan Earthquake and tsunami and the following recolonization of the subtidal benthic polychaete community were examined by monthly pre- and post-quake field surveys that were conducted in Onagawa Bay from 2007 to 2013. Before the tsunami, the species composition in this benthic community was constant and was dominated by cirratulid and magelonid polychaetes. The density and biomass of benthic polychaetes drastically decreased after the tsunami, and the polychaete community fluctuated during the 2 years after the natural disaster. Spionid and capitellid polychaetes were dominant at this period. In June 2013, the community entered a new constant stage dominated by maldanids, which is different from the pre-quake community. Ecological impacts due to chemical pollution were suggested in addition to the tsunami disturbance. These overlapping effects and physical, chemical and biological factors affected the recovery and recolonization of the polychaete community after the natural disaster. Copyright © 2015 Elsevier Ltd. All rights reserved.

Late 20th Century benthic foraminiferal distribution in Central San Francisco Bay, California: Influence of the Trochammina hadai invasion

USGS Publications Warehouse

McGann, Mary L.

2014-01-01

Samples collected from 1965 onward were also compared with those from 1998 to investigate how the distribution of benthic foraminifera in Central Bay has changed over the latter half of the 20th Century, particularly in response to the invasion by Trochammina hadai. In 1998, T. hadai was recovered at 46 of 55 sites in Central Bay, comprising from 0.3 to 97% (mean = 23%) of the foraminiferal fauna. With the species’ affiliation for shallow environments, it is not unexpected that it dominated the fauna of the Shallow Subtidal Biofacies (68-97%, mean = 77%) and was also a significant component of the Intermediate Subtidal Biofacies (7-51%, averaging 28%). In the deeper waters west of Alcatraz Island, the abundance of T. hadai was significantly less (mean = 8%), most likely reflecting allochthonous specimens that were the result of post-mortem transport. A cluster analysis clearly distinguishes pre- and post-invasion biofacies, illustrating how dominant T. hadai has become in Central Bay.

Brucite microbialites in living coral skeletons: Indicators of extreme microenvironments in shallow-marine settings

USGS Publications Warehouse

Nothdurft, L.D.; Webb, G.E.; Buster, N.A.; Holmes, C.W.; Sorauf, J.E.; Kloprogge, J.T.

2005-01-01

Brucite [Mg(OH)2] microbialites occur in vacated interseptal spaces of living scleractinian coral colonies (Acropora, Pocillopora, Porites) from subtidal and intertidal settings in the Great Barrier Reef, Australia, and subtidal Montastraea from the Florida Keys, United States. Brucite encrusts microbial filaments of endobionts (i.e., fungi, green algae, cyanobacteria) growing under organic biofilms; the brucite distribution is patchy both within interseptal spaces and within coralla. Although brucite is undersaturated in seawater, its precipitation was apparently induced in the corals by lowered pCO 2 and increased pH within microenvironments protected by microbial biofilms. The occurrence of brucite in shallow-marine settings highlights the importance of microenvironments in the formation and early diagenesis of marine carbonates. Significantly, the brucite precipitates discovered in microenvironments in these corals show that early diagenetic products do not necessarily reflect ambient seawater chemistry. Errors in environmental interpretation may arise where unidentified precipitates occur in microenvironments in skeletal carbonates that are subsequently utilized as geochemical seawater proxies. ?? 2005 Geological Society of America.

Ecological evaluation of an experimental beneficial use scheme for dredged sediment disposal in shallow tidal waters.

PubMed

van der Wal, Daphne; Forster, Rodney M; Rossi, Francesca; Hummel, Herman; Ysebaert, Tom; Roose, Frederik; Herman, Peter M J

2011-01-01

An experiment was performed to test an alternative dredging strategy for the Westerschelde estuary. Clean sand dredged from the navigation channel was disposed seawards of an eroding intertidal flat in order to modify morphology and hydrodynamics, improving the multi-channel system with ecologically productive shallow water habitat. Five years of intensive monitoring revealed that part of the disposed sediment moved slowly towards the flat, increasing the very shallow subtidal and intertidal area, as planned. The sand in the impact zone became gradually finer after disposal, possibly due to reduced current velocities. Nevertheless, no changes in macrobenthic biomass, density, species richness and composition were detected in the subtidal zone, also demonstrating rapid macrobenthic recovery. In the intertidal zone, no ecological effects could be revealed superimposed on trends associated with long-term sediment fining. Thus, despite morphological success and absence of detected negative ecological impacts of the experiment, new beneficial habitat was not created. Copyright © 2010 Elsevier Ltd. All rights reserved.

Assessment of heavy metal and petroleum hydrocarbon contamination in the Sultanate of Oman with emphasis on harbours, marinas, terminals and ports.

PubMed

Jupp, Barry P; Fowler, Scott W; Dobretsov, Sergey; van der Wiele, Henk; Al-Ghafri, Ahmed

2017-08-15

The assessment here includes data on levels of contaminants (petroleum hydrocarbons and heavy metals) in sediments and biomonitor organisms, including the eulittoral rock oyster Saccostrea cucullata and subtidal biomonitors, the barnacle Balanus trigonus and the antipatharian coral Antipathes sp., at harbours, marinas, terminals and large ports along the coastline of Oman. TBT levels in harbour and port sediments up to a maximum of 100ppb TBT dry weight are highlighted. Oysters contained concentrations up to 367ppm mg TPH/kg dry weight. The maximum levels of Cd, Cu, Pb and Zn were found in the subtidal sediments and barnacles at the oil tanker loading Single Buoy Mooring stations in Mina Al Fahal. In general, the levels of most of the contaminants analysed are at low to moderate concentrations compared to those in highly contaminated sites such as shipyards and dry docks, but continued monitoring is recommended especially during any dredging campaigns. Copyright © 2017 Elsevier Ltd. All rights reserved.

New Invertebrate Vectors of Okadaic Acid from the North Atlantic Waters--Portugal (Azores and Madeira) and Morocco.

PubMed

Silva, Marisa; Rodriguez, Inés; Barreiro, Aldo; Kaufmann, Manfred; Isabel Neto, Ana; Hassouani, Meryem; Sabour, Brahim; Alfonso, Amparo; Botana, Luis M; Vasconcelos, Vitor

2015-12-08

Okadaic acid and its analogues are potent phosphatase inhibitors that cause Diarrheic Shellfish Poisoning (DSP) through the ingestion of contaminated shellfish by humans. This group of toxins is transmitted worldwide but the number of poisoning incidents has declined over the last 20 years due to legislation and monitoring programs that were implemented for bivalves. In the summer of 2012 and 2013, we collected a total of 101 samples of 22 different species that were made up of benthic and subtidal organisms such echinoderms, crustaceans, bivalves and gastropods from Madeira, São Miguel Island (Azores archipelago) and the northwestern coast of Morocco. The samples were analyzed by UPLC-MS/MS. Our main objective was to detect new vectors for these biotoxins. We can report nine new vectors for these toxins in the North Atlantic: Astropecten aranciacus, Arbacia lixula, Echinaster sepositus, Holothuria sanctori, Ophidiaster ophidianus, Onchidella celtica, Aplysia depilans, Patella spp., and Stramonita haemostoma. Differences in toxin contents among the species were found. Even though low concentrations were detected, the levels of toxins that were present, especially in edible species, indicate the importance of these types of studies. Routine monitoring should be extended to comprise a wider number of vectors other than for bivalves of okadaic acid and its analogues.

New Invertebrate Vectors of Okadaic Acid from the North Atlantic Waters—Portugal (Azores and Madeira) and Morocco

PubMed Central

Silva, Marisa; Rodriguez, Inés; Barreiro, Aldo; Kaufmann, Manfred; Neto, Ana Isabel; Hassouani, Meryem; Sabour, Brahim; Alfonso, Amparo; Botana, Luis M.; Vasconcelos, Vitor

2015-01-01

Okadaic acid and its analogues are potent phosphatase inhibitors that cause Diarrheic Shellfish Poisoning (DSP) through the ingestion of contaminated shellfish by humans. This group of toxins is transmitted worldwide but the number of poisoning incidents has declined over the last 20 years due to legislation and monitoring programs that were implemented for bivalves. In the summer of 2012 and 2013, we collected a total of 101 samples of 22 different species that were made up of benthic and subtidal organisms such echinoderms, crustaceans, bivalves and gastropods from Madeira, São Miguel Island (Azores archipelago) and the northwestern coast of Morocco. The samples were analyzed by UPLC-MS/MS. Our main objective was to detect new vectors for these biotoxins. We can report nine new vectors for these toxins in the North Atlantic: Astropecten aranciacus, Arbacia lixula, Echinaster sepositus, Holothuria sanctori, Ophidiaster ophidianus, Onchidella celtica, Aplysia depilans, Patella spp., and Stramonita haemostoma. Differences in toxin contents among the species were found. Even though low concentrations were detected, the levels of toxins that were present, especially in edible species, indicate the importance of these types of studies. Routine monitoring should be extended to comprise a wider number of vectors other than for bivalves of okadaic acid and its analogues. PMID:26670254

Patterns of species diversity in estuarine benthic communities along teh US west coast

EPA Science Inventory

Estuaries in the Pacific North West (PNW) were recently classified by whether the estuary is river- or ocean-dominated, the extent of intertidal to subtidal environments, and spatial salinity patterns. We examine whether these characteristics predict patterns of soft-sediment, m...

A PHOENIX RISING: ENVIRONMENTAL MONITORING AND ASSESSMENT PROGRAM AND THE COASTAL 2000 NATIONAL SURVEY

EPA Science Inventory

The purpose of the Environmental Monitoring and Assessment Program-Coastal Resources is to estimate the current status, extent, changes, and trends in ecological indicators of the condition of the nation's coastal resources (intertidal, subtidal, and offshore) on a regional and n...

Structural Changes in Molluscan Community over a 15-Year Period before and after the 2011 Great East Japan Earthquake and Subsequent Tsunami around Matsushima Bay, Miyagi Prefecture, Northeastern Japan.

PubMed

Sato, Shin'ichi; Chiba, Tomoki

2016-01-01

We examined structural changes in the molluscan community for ten years (2001-2010) before and five years (2011-2015) after the 2011 Great East Japan Earthquake and subsequent tsunami around Matsushima Bay, Miyagi Prefecture, northeastern Japan. Before the earthquake and tsunami, Ruditapes philippinarum, Macoma incongrua, Pillucina pisidium, and Batillaria cumingii were dominant, and an alien predator Laguncula pulchella appeared in 2002 and increased in number. After the tsunami, R. philippinarum and M. incongrua populations quickly recovered in 2012, but P. pisidium and B. cumingii populations did not recover until 2015. By contrast, Musculista senhousia, Mya arenaria, Retusa sp., and Solen strictus were found in low densities before the tsunami, but they rapidly increased in abundance/number over five years after the tsunami. These results suggest that the molluscan community on the Tona Coast was drastically changed by the earthquake and tsunami, and some species mainly inhabiting the intertidal-subtidal zone may have increased in number because of land subsidence. We also emphasize that the seawall delayed recovery of the intertidal community after the earthquake and tsunami.

Structural Changes in Molluscan Community over a 15-Year Period before and after the 2011 Great East Japan Earthquake and Subsequent Tsunami around Matsushima Bay, Miyagi Prefecture, Northeastern Japan

PubMed Central

Chiba, Tomoki

2016-01-01

We examined structural changes in the molluscan community for ten years (2001–2010) before and five years (2011–2015) after the 2011 Great East Japan Earthquake and subsequent tsunami around Matsushima Bay, Miyagi Prefecture, northeastern Japan. Before the earthquake and tsunami, Ruditapes philippinarum, Macoma incongrua, Pillucina pisidium, and Batillaria cumingii were dominant, and an alien predator Laguncula pulchella appeared in 2002 and increased in number. After the tsunami, R. philippinarum and M. incongrua populations quickly recovered in 2012, but P. pisidium and B. cumingii populations did not recover until 2015. By contrast, Musculista senhousia, Mya arenaria, Retusa sp., and Solen strictus were found in low densities before the tsunami, but they rapidly increased in abundance/number over five years after the tsunami. These results suggest that the molluscan community on the Tona Coast was drastically changed by the earthquake and tsunami, and some species mainly inhabiting the intertidal—subtidal zone may have increased in number because of land subsidence. We also emphasize that the seawall delayed recovery of the intertidal community after the earthquake and tsunami. PMID:27936182

The kinematic and hydrographic structure of the Gulf of Maine Coastal Current

USGS Publications Warehouse

Pettigrew, N.R.; Churchill, J.H.; Janzen, C.D.; Mangum, L.J.; Signell, R.P.; Thomas, A.C.; Townsend, D.W.; Wallinga, J.P.; Xue, H.

2005-01-01

The Gulf of Maine Coastal Current (GMCC), which extends from southern Nova Scotia to Cape Cod Massachusetts, was investigated from 1998 to 2001 by means of extensive hydrographic surveys, current meter moorings, tracked drifters, and satellite-derived thermal imagery. The study focused on two principal branches of the GMCC, the Eastern Maine Coastal Current (EMCC) that extends along the eastern coast of Maine to Penobscot Bay, and the Western Maine Coastal Current (WMCC) that extends westward from Penobscot Bay to Massachusetts Bay. Results confirm that GMCC is primarily a pressure gradient-driven system with both principal branches increasing their transport in the spring and summer due to fresh-water inflows, and flowing southwestward against the mean wind forcing during this period. In the spring and summer the subtidal surface currents in the EMCC range from 0.15 to 0.30 ms−1 while subtidal WMCC currents range from 0.05 to 0.15 ms−1. The reduction of southwestward transport near Penobscot Bay is accomplished via an offshore veering of a variable portion of the EMCC, some of which recirculates cyclonically within the eastern Gulf of Maine. The degree of summer offshore veering, versus leakage into the WMCC, varied strongly over the three study years, from nearly complete disruption in 1998 to nearly continuous through-flow in 2000. Observations show strong seasonal and interannual variability in both the strength of the GMCC and the degree of connectivity of its principal branches.

Substratum type affects recruitment and development of marine assemblages over artificial substrata: A case study in the Alboran Sea

NASA Astrophysics Data System (ADS)

Sempere-Valverde, Juan; Ostalé-Valriberas, Enrique; Farfán, Gonzalo M.; Espinosa, Free

2018-05-01

There are more than 27,000 harbours along coasts worldwide and construction is expected to increase. The development and application of new ecological engineering ideas, for both old and new structures, is now imperative in order to reduce perturbation on marine coastal biota and to avoid the spread of non-native species. In this study, the early benthic assessment of subtidal and intertidal communities is tracked on five artificial substrata differing in origin, roughness, and chemical composition: Oyster Sandstone, Limestone, Gabbro, Slate and Concrete. Within substrata, Sandstone was the roughest on a 1-2 mm scale. Also, Sandstone and Limestone had predominantly calcareous composition while silicon was abundant in Concrete, Gabbro and Slate. In the intertidal zone, results showed that primary productivity and diatom abundance markedly increased with substratum roughness. In the subtidal zone, species richness and diversity over experimental substrata were lower than in adjacent rocky reefs. Nonetheless, during the first year of colonization communities varied within the experimental substrata. Coverage was higher on Sandstone than Concrete and Gabbro, and species richness was higher on Sandstone than Limestone. The differences are related to intrinsic substratum-type characteristics and showed Limestone, Gabbro and Concrete hold relatively poor ecological benefits in the first phases of ecological succession. The results may help to promote future research in this field and to test different substrata combinations and heterogeneities, for more environmentally sustainable surfaces in design of coastal structures.

Evidence for habitat-driven segregation of an estuarine fish assemblage.

PubMed

Loureiro, S N; Reis-Filho, J A; Giarrizzo, T

2016-07-01

This study examined the spatio-temporal variability in fish assemblage structure and composition following monthly sampling (August 2006 to July 2007). Three estuarine zones (upper, middle and lower) of the unvegetated intertidal and subtidal channel habitats located in the Marapanim Estuary were investigated. In each of these zones, salinity, organic matter and sediment types were measured to assess any correlation between habitat types and the fish fauna. A total of 41 496 fishes, belonging to 76 species and 29 families, was recorded. Recurring changes in both species composition and trophic structure were attributed to seasonal variations, while habitat type played a more permanent role in modifying the structure of fish assemblages. Zooplanktivores (e.g. Lycengraulis grossidens) and herbivores (e.g. Cetengraulis edentulus) used the intertidal habitat almost exclusively and were associated with salinity and substratum composition (gravel, silt and mud). In contrast, benthophages (e.g. Cathorops spixii) and benthophage-ichthyophages (e.g. Cynoscion leiarchus) were primarily associated with the subtidal habitat throughout the estuary and were highly related to the presence of sandy substrata. This study highlighted the intricate roles that local factors (such as habitat connectivity) may have on the distribution of fishes at the assemblage level. As such, incorporating habitat sharing or segregation between species should be viewed as essential for any comparisons of estuaries over large geographic scales, and in particular for conservation planning and management measures. © 2016 The Fisheries Society of the British Isles.

ESTUARINE AND SCALAR PATTERNS OF INVASION IN THE SOFT-BOTTOM BENTHIC COMMUNITIES OF THE SAN FRANCISCO ESTUARY

EPA Science Inventory

The spatial patterns of nonindigenous species in seven subtidal soft-bottom communities in the San Francisco Estuary were quantified. Sixty nonindigenous species were found out of the 533 taxa enumerated (11%). Patterns of invasion across the communities were evaluated using a ...

ENHANCED ORGANIC MATTER REMINERALIZATION AND NUTRIENT TURNOVER BY BURROWING SHRIMP POPULATIONS IN YAQUINA BAY, OR

EPA Science Inventory

Burrowing thalassinid shrimp are major ecological components of Pacific Northwest (PNW) estuaries and where they structure large areas of intertidal and shallow subtidal habitat. These crustaceans occur in dense beds (>250 m-2) and dig extensive burrow systems (>1 m) controlling ...

A DECADE OF MAPPING SUBMERGED AQUATIC VEGETATION USING COLOR INFRARED AERIAL PHOTOGRAPHY: METHODS USED AND LESSONS LEARNED

EPA Science Inventory

Annual color infrared aerial photographs acquired annually between 1997 and 2007 were used to classify distributions of intertidal and shallow subtidal native eelgrass Zostera marina and non-indigenous dwarf eelgrass Z. japonica in lower Yaquina estuary, Oregon. The use of digit...

MONITORING CHANGES IN THE ESTUARIES OF THE UNITED STATES: THE ENVIRONMENTAL MONITORING AND ASSESSMENT PROGRAM

EPA Science Inventory

The purpose of the Environmental Monitoring and Assessment Program/Estuaries (EMAP-E) is to estimate the current status, extent, changes, and trends in ecological indicators of the condition of the nation's coastal resources (intertidal, subtidal, and offshore) on a regional and ...

Development of approaches to predict the distribution of Zostera marina and Z. japonica in Pacific Northwest estuaries

EPA Science Inventory

The dominant species of submerged aquatic vegetation (SAV) in Pacific Northwest (PNW) estuaries is the intertidal and shallow subtidal seagrass, Zostera marina. Beds of Z. marina constitute a critical habitat, including providing habitat for juvenile salmon. Additionally, the n...

Bathymetric distribution patterns of Southern Ocean macrofaunal taxa: Bivalvia, Gastropoda, Isopoda and Polychaeta

NASA Astrophysics Data System (ADS)

Brandt, Angelika; Linse, Katrin; Schüller, Myriam

2009-11-01

The aim of this study is to compare the depth distributions of four major Southern Ocean macrobenthic epi- and infaunal taxa, the Bivalvia, Gastropoda, Isopoda, and Polychaeta, from subtidal to abyssal depth. All literature data up to summer 2008, as well as the unpublished data from the most recent ANDEEP I-III (Antarctic benthic deep-sea biodiversity: colonisation history and recent community patterns) expeditions to the Southern Ocean deep sea are included in the analysis. Benthic invertebrates in the Southern Ocean are known for their wide bathymetric ranges. We analysed the distributions of four of the most abundant and species-rich taxa from intertidal to abyssal (5200 m) depths in depth zones of 100 m. The depth distributions of three macrofaunal classes (Bivalvia, Gastropoda, Polychaeta) and one order (Isopoda) showed distinct differences. In the case of bivalves, gastropods and polychaetes, the number of species per depth zone decreased from the shelf to the slope at around 1000 m depth and then showed stable low numbers. The isopods showed the opposite trend; they were less species rich in the upper 1000 m but increased in species numbers from the slope to bathyal and abyssal depths. Depth ranges of families of the studied taxa (Bivalvia: 31 families, Gastropoda: 60, Isopoda: 32, and Polychaeta: 46 families) were compiled and illustrated. At present vast areas of the deep sea in the Southern Ocean remain unexplored and species accumulation curves showed that only a fraction of the species have been discovered to date. We anticipate that further investigations will greatly increase the number of species known in the Southern Ocean deep sea.

Depositional History and Sequence Stratigraphy of the Middle Ordovician Yeongheung Formation (Yeongweol Group), Taebaeksan Basin, mid-east Korea

NASA Astrophysics Data System (ADS)

Kwon, Yoo Jin; Kwon, Yi Kyun

2017-04-01

The Middle Ordovician Yeongheung Formation consists of numerous meter-scale, shallowing-upward cycles which were deposited on a shallow-marine carbonate platform. Many diagnostic sedimentary textures and structures such as supratidal laminite, tepee structure, and solution-collapsed breccia are observed, which enable to infer the dry climate and high salinity conditions during deposition of the formation. In order to understand its depositional history, this study focuses on vertical and spatial stacking patterns of the second- to third-order sequences through the detailed outcrop description and geologic mapping. A total 19 lithofacies have been recognized, which can be grouped into 5 facies associations (FAs): FA1 (Supratidal flat), FA2 (Supratidal or dolomitization of peritidal facies), FA3 (Intertidal flat), FA4 (Shallow subtidal to peritidal platform), FA5 (Shallow subtidal shoal). Global mega-sequence boundary (Sauk-Tippecanoe) occurs in solution-collapsed breccia zone in the lower part of the formation. Correlation of the shallowing-upward cycle stacking pattern across the study area defines 6 transgressive-regressive depositional sequences. Each depositional sequences comprises a package of vertical and spatial staking of shallow subtidal cycles in the lower part and peritidal cycles in the upper part of the formation. According to sequence stratigraphic interpretation, the reconstructed relative sea-level curve of the Yeongweol platform is very similar to that of the Taebaek platform. Based on the absence of siliciclastic sequence such as the Jigunsan Formation and the lithologic & stratigraphic differences, however, the Yeongweol and Taebaek groups might not belong to a single depositional system within the North China platform. The Yeongweol Group can be divided by the four subunits into their unique lithologic successions and geographic distributions. The Eastern subunit of the Yeongweol Group is composed dominantly of carbonate rocks with a high composition ratio of siliciclastic materials dominated facies in the upper part of the Yeongheung Formation. The Middle1 subunit is pervasively recognized by subaerial exposures facies (carbonate breccia, paleosol), whereas the Middle2 subunit is similar to the Middle1 subunit except for the absence of subaerial exposure features. The Western subunit lost some of its primary sedimentary structure and texture in comparison to other subunits, because of the active recrystallization, metamorphism, structural deformation and carbonate diagenesis. This study reveals depositional history and refines sequence stratigraphy of the Yeongheung Formation, promoting understanding of the basin evolution of the Yeongweol Group.

A STAGE-BASED POPULATION MODEL FOR BAY SCALLOPS (ARGOPECTEN IRRADIANS) AND IMPLICATIONS FOR POPULATION-LEVEL EFFECTS OF HABITAT ATLERATION.

EPA Science Inventory

Bay scallops (Argopecten irradians) inhabit shallow subtidal habitats along the Atlantic coast of the United States and require settlement substrates, such as submerged aquatic vegetation (SAV), for their early juvenile stages. The short lifespan of bay scallops (1-2 yr) coupled...

A DECADE OF MAPPING SUBMERGED AQUATIC VEGETATION USING COLOR INFRARED AERIAL PHOTOGRAPHY: METHODS USED AND LESSONS LEARNED - 5-14-2014

EPA Science Inventory

Annual color infrared (CIR) aerial photographs acquired annually between 1997 and 2007 were used to classify distributions of intertidal and shallow subtidal native eelgrass Zostera marina and non-indigenous dwarf eelgrass Z. japonica in lower Yaquina estuary, Oregon. The use of...

SEASONAL CHANGES IN THE AMPHIPOD FAUNA OF 'MICROCIONA PROLIFERA' (ELLIS AND SOLANDER) (PORIFERA: DEMOSPONGIA) AND ASSOCIATED SPONGES IN A SHALLOW SALT-MARSH CREEK

EPA Science Inventory

Between September 1976 and August 1978, samples of four species of sponge, Microciona prolifera, Haliclona loosanoffi, Lissodendoryx, and Halichondria bowerbanki were collected from subtidal shell debris in a North Edisto River, South Carolina saltmarsh creek and associated amphi...

Use of Computed Tomography Imaging for Qualifying Coarse Roots, Rhizomes, Peat, and Particle Densities in Marsh Soils

EPA Science Inventory

Computed tomography (CT) imaging has been used to describe and quantify subtidal, benthic animals such as polychaetes, amphipods, and shrimp. Here, for the first time, CT imaging is used to successfully quantify wet mass of coarse roots, rhizomes, and peat in cores collected from...

Transcriptome analysis and discovery of genes involved in immune pathways from coelomocytes of Onchidium struma after bacterial challenge

USDA-ARS?s Scientific Manuscript database

Onchidium struma widely distributes in subtidal and low-tidal zones, which is considered to be an economical species with rich nutrition, a valuable biomonitor for heavy metal pollution and a representative species for evolution from ocean to land. However, there is limited genetic information avail...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wolfe, D.A.

Three separate papers are represented in this final report; Toxicity of intertidal and subtidal sediments contaminated by the Exxon Valdez oil spill; Comparative toxicities of polar and non-polar organic fractions from sediments affected by the Exxon Valdez oil spill in Prince William Sound, Alaska; and Fate of the oil spilled from the T/V Exxon Valdez in Prince William Sound, Alaska.

Implications of mycosporine-like amino acid and antioxidant defenses in UV-B radiation tolerance for the algae species Ptercladiella capillacea and Gelidium amansii.

PubMed

Lee, Tse-Min; Shiu, Chia-Tai

2009-02-01

Ultraviolet-B (UV-B) radiation (0.5, 1.0, 1.5, and 3.0Wm(-2)) induced higher H(2)O(2) production and lipid peroxidation in alga Gelidium amansii inhabiting in lower subtidal regions than upper subtidal alga Ptercladiella capillacea. Compared to G. amansii, mycosporine-like amino acid (MAA) concentration in P. capillacea was higher and can be increased by 0.5-1.0Wm(-2) UV-B, while carotenoid concentration was lower but also increased by 1.5-3.0Wm(-2) UV-B. UV-B increased ascorbate concentration, but to a higher degree in P. capillacea. UV-B decreased glutathione concentration, but to a higher degree in G. amansii. UV-B increased ascorbate peroxidase (APX) and glutathione reductase (GR) activities in P.capillacea but decreased them in G. amansii. UV-B increased superoxide dismutase and catalase activities, but to a higher degree in G. amansii. So, G. amansii suffered greater oxidative stress from UV-B radiation. P. capillacea can effectively reduce UV-B sensitivity by increasing sunscreen ability and antioxidant defense capacity.

The larvae of congeneric gastropods showed differential responses to the combined effects of ocean acidification, temperature and salinity.

PubMed

Zhang, Haoyu; Cheung, S G; Shin, Paul K S

2014-02-15

The tolerance and physiological responses of the larvae of two congeneric gastropods, the intertidal Nassarius festivus and subtidal Nassarius conoidalis, to the combined effects of ocean acidification (pCO2 at 380, 950, 1250 ppm), temperature (15, 30°C) and salinity (10, 30 psu) were compared. Results of three-way ANOVA on cumulative mortality after 72-h exposure showed significant interactive effects in which mortality increased with pCO2 and temperature, but reduced at higher salinity for both species, with higher mortality being obtained for N. conoidalis. Similarly, respiration rate of the larvae increased with temperature and pCO2 level for both species, with a larger percentage increase for N. conoidalis. Larval swimming speed increased with temperature and salinity for both species whereas higher pCO2 reduced swimming speed in N. conoidalis but not N. festivus. The present findings indicated that subtidal congeneric species are more sensitive than their intertidal counterparts to the combined effects of these stressors. Copyright © 2014 Elsevier Ltd. All rights reserved.

A second, cryptic species of the soft coral genus Incrustatus (Anthozoa: Octocorallia: Clavulariidae) from Tierra del Fuego, Argentina, revealed by DNA barcoding

NASA Astrophysics Data System (ADS)

McFadden, Catherine S.; van Ofwegen, Leen P.

2013-03-01

The encrusting soft coral Incrustatus comauensis is a common denizen of hard substrates in the shallow sub-tidal zone from the central Chilean fjords to the Cape Horn region of southern South America. DNA barcoding of specimens collected from the Beagle Channel, Tierra del Fuego, Argentina, revealed the presence of a second, cryptic species of Incrustatus that is syntopic with I. comauensis. We describe Incrustatus niarchosi, a new species that can be distinguished morphologically from I. comauensis by differences in the microscopic ornamentation of the coenenchymal sclerites. To date, I. niarchosi n. sp. is known only from the Beagle Channel. A population of I. comauensis discovered in the intertidal zone in eastern Tierra del Fuego represents a new record of the species for that habitat and geographic region. Although the intertidal population is also distinct genetically, it is morphologically indistinguishable from sub-tidal Chilean populations of I. comauensis, and at present, there is insufficient evidence to support its status as a separate species.

Fidelity of life and death molluscan assemblages from carbonate tidal flats in the Persian (Arabian) Gulf

NASA Astrophysics Data System (ADS)

García-Ramos, Diego A.; Albano, Paolo G.; Harzhauser, Mathias; Piller, Werner E.; Zuschin, Martin

2016-04-01

Live-dead (LD) studies aim to help understand how faithfully fossil assemblages can be used to quantitatively infer the structure of the original living communities that generated them. To this purpose, LD comparisons have been conducted in different terrestrial and aquatic environments to assess how environment-specific differences in quality and intensity of taphonomic factors affect LD fidelity. In sub-tropical and tropical settings, most LD studies have focused on hard substrates or seagrass bottoms. Here we present results on molluscan assemblages from soft carbonate sediments in tidal flats of the Persian (Arabian) Gulf (Indo-West Pacific biogeographic province). We analyzed a total of 7193 mollusks collected from six sites comprising time-averaged death assemblages (DAs) and snapshot living assemblages (LAs). All analyses were performed at site and at habitat scales after correcting for sample-size differences. We found a good match in proportional abundance and a notable mismatch in species composition. In fact, species richness in DAs is 6 times larger than in LAs at site scale, and 4 times at habitat scale. Additionally, we found a good fidelity of evenness, and rank abundance of feeding guilds. Other studies have shown that molluscan DAs from subtidal carbonate environments can display lower time-averaging than those from siliciclastic environments due to high rates of shell loss to bioerosion and dissolution. For our case study of tidal flat carbonate settings, we interpret that despite temporal autocorrelation (good fidelity of proportional abundance), substantial differences in species richness and composition can be explained by early cementation, lateral mixing, intense bioturbation and moderate sedimentation rates. Our results suggest that tidal flat carbonate environments can potentially lead to a wider window of time-averaging in comparison with subtidal carbonate settings.

A Herbivore Knows Its Patch: Luderick, Girella tricuspidata, Exhibit Strong Site Fidelity on Shallow Subtidal Reefs in a Temperate Marine Park

PubMed Central

Ferguson, Adrian M.; Harvey, Euan S.; Taylor, Matthew D.; Knott, Nathan A.

2013-01-01

Understanding movement patterns, habitat use and behaviour of fish is critical to determining how targeted species may respond to protection provided by “no-take” sanctuary zones within marine parks. We assessed the fine and broad scale movement patterns of an exploited herbivore, luderick (Girella tricuspidata), using acoustic telemetry to evaluate how this species may respond to protection within Jervis Bay (New South Wales, Australia). We surgically implanted fourteen fish with acoustic transmitters and actively and passively tracked individuals to determine fine and broad scale movement patterns respectively. Eight fish were actively tracked for 24 h d¯1 for 6 d (May 2011), and then intermittently over the following 30 d. Six fish were passively tracked from December 2011 to March 2012, using a fixed array of receivers deployed across rocky reefs around the perimeter of the bay. Luderick exhibited strong site fidelity on shallow subtidal reefs, tending to remain on or return consistently to the reef where they were caught and released. All eight fish actively tracked used core areas solely on their release reef, with the exception of one fish that used multiple core areas, and four of the six fish passively tracked spent between 75 to 96% of days on release reefs over the entire tracking period. Luderick did move frequently to adjacent reefs, and occasionally to more distant reefs, however consistently returned to their release reef. Luderick also exhibited predictable patterns in movement between spatially distinct daytime and night-time core use areas. Night-time core use areas were generally located in sheltered areas behind the edge of reefs. Overall, our data indicate luderick exhibit strong site fidelity on shallow subtidal reefs in Jervis Bay and suggests that this important herbivore may be likely to show a positive response to protection within the marine park. PMID:23741515

A herbivore knows its patch: luderick, Girella tricuspidata, exhibit strong site fidelity on shallow subtidal reefs in a temperate marine park.

PubMed

Ferguson, Adrian M; Harvey, Euan S; Taylor, Matthew D; Knott, Nathan A

2013-01-01

Understanding movement patterns, habitat use and behaviour of fish is critical to determining how targeted species may respond to protection provided by "no-take" sanctuary zones within marine parks. We assessed the fine and broad scale movement patterns of an exploited herbivore, luderick (Girella tricuspidata), using acoustic telemetry to evaluate how this species may respond to protection within Jervis Bay (New South Wales, Australia). We surgically implanted fourteen fish with acoustic transmitters and actively and passively tracked individuals to determine fine and broad scale movement patterns respectively. Eight fish were actively tracked for 24 h d¯(1) for 6 d (May 2011), and then intermittently over the following 30 d. Six fish were passively tracked from December 2011 to March 2012, using a fixed array of receivers deployed across rocky reefs around the perimeter of the bay. Luderick exhibited strong site fidelity on shallow subtidal reefs, tending to remain on or return consistently to the reef where they were caught and released. All eight fish actively tracked used core areas solely on their release reef, with the exception of one fish that used multiple core areas, and four of the six fish passively tracked spent between 75 to 96% of days on release reefs over the entire tracking period. Luderick did move frequently to adjacent reefs, and occasionally to more distant reefs, however consistently returned to their release reef. Luderick also exhibited predictable patterns in movement between spatially distinct daytime and night-time core use areas. Night-time core use areas were generally located in sheltered areas behind the edge of reefs. Overall, our data indicate luderick exhibit strong site fidelity on shallow subtidal reefs in Jervis Bay and suggests that this important herbivore may be likely to show a positive response to protection within the marine park.

Subtidal eelgrass/macroalgae surveys for the proposed breakwaters at the US Coast Guard Station at Ediz Hook, Washington, March 1993

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shreffler, D.K.

1993-05-01

In 1993, the US Coast Guard proposed to construct two breakwaters and a debris boom to protect its existing pier and moored vessels inside Ediz Hook in Port Angeles Harbor, Washington. To assist the US Army Corps of Engineers -- Seattle District in determining the potential environmental impacts of the proposed breakwaters, Battelle/Marine Sciences Laboratory performed subtidal SCUBA surveys as specified in the Washington Department of Fisheries intermediate eelgrass/macroalgae habitat survey guidelines. The objectives of the subtidal surveys were to (1) quantify the shoot densities of eelgrass; (2) provide percent cover estimates for non-eelgrass macroalgae species; (3) develop a sitemore » map indicating the qualitative distribution of eelgrass/macroalgae species, substrate characterization, approximate depth contours, and the approximate location of the proposed project features; and (4) document the time and date of the surveys, turbidity/visibility, presence of invertebrate/vertebrate species, and anecdotal observations pertinent to habitat characterization of the project site. A total of 14 dives along 12 transects (T1--T12) were successfully completed between March 15 and March 17, 1993. Eelgrass was observed on all of the transects except T7 and T8 at the western debris barrier and T12 along the waterward margin of the existing T-pier. The vicinity of the proposed east breakwater had the highest eelgrass shoot densities (up to 89 shoots/m{sup 2}) observed by the divers. Macroalgae and invertebrate species diversity were also highest at the east breakwater site. The low eelgrass densities observed at the west debris barrier site (0 to 14 shoots/m{sup 2}) can be attributed mostly to the lack of suitable substrate. The existing layer of wood debris armoring the bottom at the west project site currently limits, and in the areas of heaviest deposition probably precludes, the growth of eelgrass. As was expected, no eelgrass was observed at the south breakwater site.« less

Thriving reefs in the Baltic? Diversity and small-scale variability of hard-bottom assemblages along natural and anthropogenic gradients in the German Baltic Sea

NASA Astrophysics Data System (ADS)

Beisiegel, K.; Zettler, M. L.; Darr, A.; Schiele, K.; Schwarzer, K.; Richter, P.

2016-02-01

Since the vast majority of global seafloor habitats are characterized by soft sediments, hard substrata represent rarities hosting species and functional groups not found elsewhere. The same holds true for the enclosed and brackish Baltic Sea, where hard substrata occur patchy and infrequent. Subtidal low-relief terrains with homogenous mud and sand flats form the predominant benthic substrate and the associated infaunal communities are well described. In contrast, the diverse, primarily epibenthic assemblages on subtidal hard bottoms received far less attention. Since 2011 a team of geologists and biologists aims to map the subtidal habitats and biotopes. On joint cruises, geologists use side scan sonar to map the seafloor sediments while ground truthing is performed in collaboration with biologists. Biogenic concretions like mussel beds and hard structures of geogenic origin like stones and glacial boulders form the predominant hard substrata in the German Baltic Sea. These habitats are subsequently investigated using frame sampling by SCUBA diving, dredges or towed photo/video platforms. The type of hard substratum, salinity and light availability seem to be the most important natural factors that determine the epibenthic community composition. Identified geological substrata and biological communities are matched with biotopes of the HELCOM Underwater biotope and habitat classification system. Predictive modeling approaches are used to generate biotope specific distribution patterns, based on biological point samples, area-wide sediment distribution maps and measured/modeled environmental parameters. The resulting hard-bottom biotope maps, combining geological and biological information, complement the existing area-wide biotope map of soft sediment communities. The maps are important tools both for the scientific community to understand the functioning of marine ecosystems as well as for nature conservation, e.g. for the implementation of MPA management plans and for the development of monitoring concepts and the red list classification of biotopes.

Differences in the structure and functioning of two communities: Frondose and turf-forming macroalgal dominated habitats.

PubMed

M Martins, Gustavo; Hipólito, Cláudia; Parreira, Filipe; C L Prestes, Afonso; Dionísio, Maria A; N Azevedo, José M; Neto, Ana I

2016-05-01

In many coastal regions, vegetated habitats (e.g. kelps forests, seagrass beds) play a key role in the structure and functioning of shallow subtidal reef ecosystems, by modifying local environmental conditions and by providing food and habitat for a wide range of organisms. In some regions of the world, however, such idiosyncratic ecosystems are largely absent and are often replaced by less notable ecosystem formers. In the present study, we empirically compared the structure and functioning of two distinct shallow-water habitats present in the Azores: one dominated by smaller frondose brown macroalgae (Dictyotaceae and Halopteris) and one dominated by low-lying turfs. Two replicated areas of each habitat were sampled at two different times of the year, to assess spatial and temporal consistency of results. Habitats dominated by small fronds were significantly (ca. 3 times) more productive (when standardized per algal mass) compared to the turf-dominated habitats, and supported a distinct assemblage (both in terms of composition and abundance) of associated macrofauna. Unlike other well-known and studied vegetated habitats (i.e. kelp forests), however, no effects of habitat were found on the structure of benthonic fish assemblages. Results were spatially and temporally consistent suggesting that, in warmer temperate oceans, habitats dominated by species of smaller frondose brown algae can also play an important role in the structure and functioning of subtidal communities and may, to a certain extent, be considered analogous to other well-known vegetated habitats around the world (i.e. kelp forests, seagrass beds). Copyright © 2016 Elsevier Ltd. All rights reserved.

Sea Level Affecting Marshes Model (SLAMM)‐New Functionality for Predicting Changes in Distribution of Submerged Aquatic Vegetation in Response to Sea Level Rise.Version 1.0

EPA Science Inventory

Submerged aquatic vegetation (SAV) is an ecologically important habitat world-wide. In Pacific Northwest (PNW) estuaries, SAV in the lower intertidal and shallow subtidal habitats are dominated by the native seagrass, Zostera marina also referred to as submerged aquatic vegetati...

The Role of Physical-Chemical Factors in Structuring Subtidal Marine and Estuarine Benthos.

DTIC Science & Technology

1983-06-01

Yucatan and West Indies (Bahr 1981), and has even been 29 reported from Brazil (Gunter 1951). The Pacific oyster (Oystrea lurida) replaces the Atlantic...N. T. 1970. "The Role of Zooplankton in the Nutrition of Scleractinian Corals," Limnol. Oceanogr., 15:579-586. Johnson, R. G. 1970. "Variations in

Has the rapidly expanding invasive dwarf eelgrass Zostera japonica in Yaquina estuary, Oregon impacted the distribution of native eelgrass Zostera marina – a critical intertidal habitat?

EPA Science Inventory

Native eelgrass, Zostera marina, occupies a significant portion of marine-dominated intertidal and near-subtidal sectors of many coastal estuaries. In recent decades an invasive congener, Z. japonica, has become established in many Pacific Northwest estuaries. We measured the h...

Has the rapidly expanding invasive dwarf eelgrass Zostera japonica in Yaquina estuary, Oregon impacted the distribution of native eelgrass Zostera marina – a critical intertidal habitat? - CERF

EPA Science Inventory

Native eelgrass, Zostera marina, occupies a significant portion of marine-dominated intertidal and near-subtidal sectors of many coastal estuaries. In recent decades an invasive congener, Z. japonica, has become established in many Pacific Northwest estuaries. We measured the h...

US-Canada Monitoring Network Reveals Biodiversity Patterns in Data-poor Marine Cobble-Boulder Habitats of the Coastal Northwest Atlantic

NASA Astrophysics Data System (ADS)

Wahle, R.; Hunt, H.; Tremblay, J.; Comeau, M.; Silva, A.; Rochette, R.

2016-02-01

In the Northeast US and Atlantic Canada a regional collaborative of marine resource agencies, academics, and fishing industry participants monitor more than 100 coastal sites with subtidal cobble-boulder habitat, a prime nursery of commercially important lobsters and crabs. The survey's prime motivation is to quantify annual recruitment of early juvenile stages of these crustaceans. Quantifying faunal abundance in subtidal cobble-boulder habitats is logistically challenging, defying trawl, core and camera. Until recently surveys of cobble habitats were solely conducted by divers using airlift suction samplers in natural cobble beds. In 2005 we developed standardized cobble-filled collectors that considerably expand the survey's reach to greater depths and offshore areas. In addition to their value in monitoring commercial crustaceans, these vessel-deployed collectors have proven to be especially useful in biodiversity studies. Here we describe patterns of species richness and abundance of decapod crustaceans and small demersal fishes colonizing 800 cobble-filled collectors deployed yearly in 2008 and 2009 at near-shore sites across the steep thermal and biogeographic gradient from Rhode Island, USA to Newfoundland, Canada to 76 m depth. At least 17 decapod and 24 fish genera were represented, including cryptic fish taxa not readily detected with other sampling gear. Species richness at shallow sites (5-10 m) was greatest in the south, but did not follow a simple latitudinal cline; rather, it correlated strongly with the complex geography of summer bottom temperature, thereby setting a baseline for climate change studies. Given the world-wide prevalence of this coastal habitat, broader monitoring will reveal new insights on biodiversity patterns and ecosystem services it provides. We seek wider collaboration with the scientific community and stakeholders toward a broader understanding of this poorly studied marine habitat.

Entrainment of the Circadian Rhythm in Egg Hatching of the Crab Dyspanopeus sayi by Chemical Cues from Ovigerous Females.

PubMed

Forward, Richard B; Sanchez, Kevin G; Riley, Paul P

2016-02-01

The subtidal crab Dyspanopeus sayi has a circadian rhythm in larval release with a free-running period of 24.1 h. Under constant conditions, eggs hatch primarily in the 4-h interval after the time of sunset. The study tested the new model for entrainment in subtidal crabs, which proposes that the female perceives the environmental cycles and entrains the endogenous rhythm in the embryos. Results verified the model for D. sayi. Hatching by embryos collected from the field when they had not yet developed eye pigments, and were kept in constant conditions attached to their mother, exhibited the circadian hatching rhythm. Attached embryos could also be entrained to a new photoperiod in the laboratory before they developed eye pigments. Further, mature embryos removed from the female hatched rhythmically, indicating that a circadian rhythm resides in the embryos. However, if mature embryos with eye pigments were removed from the female and exposed to a new light-dark cycle, they could not be entrained to the new cycle; rather, they hatched according to the timing of the original light-dark cycle. Nevertheless, detached, mature embryos would entrain to a new light-dark cycle if they were in chemical, but not physical, contact with the female. Thus, the female perceives the light-dark cycle, and uses chemical cues to entrain the circadian rhythm of hatching by the embryos. © 2016 Marine Biological Laboratory.

Variations of Morphologic Changes induced by Tropical Storm Debby along Three Barrier Island, West-Central Florida, USA

NASA Astrophysics Data System (ADS)

Wang, P.; Roberts, T.

2012-12-01

Tropical Storm Debby generated sustained high waves and elevated water levels for nearly three days from June 24th to 26th, 2012, inducing substantial changes in beach and nearshore morphology. In addition, the storm winds and high waves approached the coast from a highly oblique angle from the south, driving substantial northward longshore sand transport, opposite to the regional net annual southward transport. A total of 145 beach and nearshore profiles along 3 adjacent barrier islands were surveyed 2 weeks before and one week after the storm impact. Overall, dune, beach, intertidal, and immediate subtidal areas suffered erosion, while deposition was measured over the nearshore bar. Beach recovery in the form of ridge and runnel development occurred as the storm energy subsided. Substantial longshore variations of storm-induced beach changes were measured, including both severe dune/beach/berm erosion and storm berm accretion, and both onshore and offshore migration of nearshore bar. Factors controlling these longshore variations include: 1) the oblique approaching of the storm forcing, 2) pre-storm beach morphology and chronic erosional or accretional trends, 3) sediment supply, and 4) tidal inlet and beach interactions. Wide spreading dune scarping occurred along the 30-km studied coast. Based on the pre- and post-storm survey data, a balanced sediment budget is obtained accounting for sand volume loss from dune, beach, intertidal, and subtidal zones, and sand gains over the nearshore bar and along the northern sections of the beach.

Subtidal circulation patterns in a shallow, highly stratified estuary: Mobile Bay, Alabama

USGS Publications Warehouse

Noble, M.A.; Schroeder, W.W.; Wiseman, W.J.; Ryan, H.F.; Gelfenbaum, G.

1996-01-01

Mobile Bay is a wide (25-50 km), shallow (3 m), highly stratified estuary on the Gulf coast of the United States. In May 1991 a series of instruments that measure near-surface and near-bed current, temperature, salinity, and middepth pressure were deployed for a year-long study of the bay. A full set of measurements were obtained at one site in the lower bay; all but current measurements were obtained at a midbay site. These observations show that the subtidal currents in the lower bay are highly sheared, despite the shallow depth of the estuary. The sheared flow patterns are partly caused by differential forcing from wind stress and river discharge. Two wind-driven flow patterns actually exist in lower Mobile Bay. A barotropic response develops when the difference between near-surface and near-bottom salinity is less than 5 parts per thousand. For stronger salinity gradients the wind-driven currents are larger and the response resembles a baroclinic flow pattern. Currents driven by river flows are sheared and also have a nonlinear response pattern. Only near-surface currents are driven seaward by discharges below 3000 m3/s. At higher discharge rates, surface current variability uncouples from the river flow and the increased discharge rates drive near-bed current seaward. This change in the river-forced flow pattern may be associated with a hydraulic jump in the mouth of the estuary. Copyright 1996 by the American Geophysical Union.

Subtidal circulation in a deep-silled fjord: Douglas Channel, British Columbia

NASA Astrophysics Data System (ADS)

Wan, Di; Hannah, Charles G.; Foreman, Michael G. G.; Dosso, Stan

2017-05-01

Douglas Channel, a deep fjord on the west coast of British Columbia, Canada, is the main waterway in the fjord system that connects the town of Kitimat to Queen Charlotte Sound and Hecate Strait. A 200 m depth sill divides Douglas Channel into an outer and an inner basin. This study examines the low-frequency (from seasonal to meteorological bands) circulation in Douglas Channel from data collected at three moorings deployed during 2013-2015. The deep flows are dominated by a yearly renewal that takes place from May/June to early September. A dense bottom layer with a thickness of 100 m that cascades through the system at the speed of 0.1-0.2 m s-1, which is consistent with gravity currents. Estuarine flow dominates the circulation above the sill depth, and the observed landward net volume flux suggests that it is necessary to include the entire complex channel network to fully understand the estuarine circulation in the system. The influence of the wind forcing on the subtidal circulation is not only at the surface, but also at middepth. The along-channel wind dominates the surface current velocity fluctuations and the sea level response to the wind produces a velocity signal at 100-120 m in the counter-wind direction. Overall, the circulation in the seasonal and the meteorological bands is a mix of estuarine flow, direct wind-driven flow, and the barotropic and baroclinic responses to changes to the surface pressure gradient caused by the wind stress.

Cold Front Driven Flows Through Multiple Inlets of Lake Pontchartrain Estuary

NASA Astrophysics Data System (ADS)

Huang, Wei; Li, Chunyan

2017-11-01

With in situ observations using acoustic Doppler current profilers (ADCPs) and numerical experiments using the Finite Volume Coastal Ocean Model (FVCOM), this study investigates atmospheric cold front induced exchange of water between Lake Pontchartrain Estuary and coastal ocean through multiple inlets. Results show that the subtidal hydrodynamic response is highly correlated with meteorological parameters. Northerly and westerly winds tend to push water out of Lake Pontchartrain, while south and east winds tend to produce currents flowing into it. For most cases, the subtidal water level is inversely correlated with the east wind, with the correlation coefficient being ˜0.8. The most important finding of this work is that, contrary to intuition, the cold front induced remote wind effect has the greatest contribution to the overall water level variation, while the local wind stress determines the surface slope inside the estuary. It is found that wind driven flow is roughly quasi steady state: the surface slope in the north-south direction is determined by the north-south wind stress, explaining ˜83% of the variability but less so in the east-west direction (˜43%). In other words, the north-south local wind stress determines the water level gradient in that direction in the estuary while the overall water level change is pretty much controlled by the open boundary which is the "remote wind effect," a regional response that can be illustrated only by a numerical model for a much larger area encompassing the estuary.

Documenting the Density of Subtidal Marine Debris across Multiple Marine and Coastal Habitats

PubMed Central

Smith, Stephen D. A.; Edgar, Robert J.

2014-01-01

Marine debris is recognised globally as a key threatening process to marine life, but efforts to address the issue are hampered by the lack of data for many marine habitats. By developing standardised protocols and providing training in their application, we worked with >300 volunteer divers from 11 underwater research groups to document the scale of the subtidal marine debris problem at 120 sites across >1000 km of the coast of NSW, Australia. Sampling consisted of replicated 25×5 m transects in which all debris was identified, counted, and, where appropriate, removed. Sites ranged from estuarine settings adjacent to major population centres, to offshore islands within marine parks. Estuaries and embayments were consistently found to be the most contaminated habitats. Fishing-related items (and especially monofilament and braided fishing line) were most prevalent at the majority of sites, although food and drink items were important contributors at sites adjacent to population centres. The results identified damaging interactions between marine debris and marine biota at some key locations, highlighting the need for management intervention to ensure habitat sustainability. This study reinforces the important contribution that volunteers can make to assessing conservation issues requiring broad-scale data collection. In this case, citizen scientists delivered data that will inform, and help to prioritise, management approaches at both statewide and local scales. These initial data also provide an important baseline for longer-term, volunteer-based monitoring programs. PMID:24743690

Early Miocene reef- and mudflat-associated gastropods from Makran (SE-Iran).

PubMed

Harzhauser, Mathias; Reuter, Markus; Mohtat, Tayebeh; Piller, Werner E

2017-01-01

A new gastropod fauna of Burdigalian (early Miocene) age is described from the Iranian part of Makran. The fauna comprises 19 species and represents three distinct assemblages from turbid water coral reef, shallow subtidal soft-bottom and mangrove-fringed mudflat environments in the northern Indian Ocean. Especially the reef-associated assemblage comprises largely new species. This is explained by the rare occurrence of reefs along the northern margin of the Miocene Indian Ocean and the low number of scientific studies dealing with the region. In terms of paleobiogeography, the fauna corresponds well to coeval faunas from the Pakistani Balochistan and Sindh provinces and the Indian Kathiawar, Kutch and Kerala provinces. During the early Miocene, these constituted a discrete biogeographic unit, the Western Indian Province, which documents the near complete biogeographic isolation from the Proto-Mediterranean Sea. Some mudflat taxa might represent examples of vicariance following the Tethys closure. The fauna also displays little connection with coeval faunas from Indonesia, documenting a strong provincialism within the Indo-West Pacific Region during early Miocene times. Neritopsis gedrosiana sp. nov., Calliostoma irerense sp. nov., Calliostoma mohtatae sp. nov. and Trivellona makranica sp. nov. are described as new species.

Heliotropism in modern stromatolites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Awramik, S.M.

1985-01-01

Three different examples of modern microbial mats and stromatolites have been discovered that exhibit a preferred orientation towards specular sunlight. In Hamelin Pool of Shark Bay, Western Australia, subtidal decimeter-sized discrete columns and intertidal centimeter-sized tufts were found pointing north. In thermal spring effluents and pools of Yellowstone National Park, columnar and conical centimeter-sized microbial structures were found to be inclined to the south. None of these inclined structures show growth orientation in response to prevailing fluid directions. Each example occurs in markedly different environments and each has different photosynthetic microbes: (1) the subtidal Shark Bay columns are dominated bymore » surficial diatoms: (2) the intertidal Shark Bay tufts constructed by a filamentous cyanobacterium; and (3) the cones and columns in Yellowstone are built by filamentous flexibacteria and cyanobacteria. Sunlight must be considered a major driving force in stromatolite morphogenesis. Extrapolation of these modern heliotropic columnar stromatolites to fossil examples supports the paleolatitude hypothesis of Vologdin (1961) and of Nordeng (1963) and the days per year hypothesis of Vanyo and Awramik (1982). Taken together, and especially when combined with paleomagnetic analyses, the procedures yield an impressive array of data on Earth and Earth-Sun-Moon histories.« less

Recruitment of marine biota onto hard and soft artificially created subtidal habitats in Sabah Al-Ahmad Sea City, Kuwait.

PubMed

Jones, David A; Nithyanandan, Manickam

2013-07-30

Remediation of coastal habitats from impacts such as dredging and excavation in Gulf coastal waters is hampered by a lack of information on natural recolonisation rates and recruitment patterns of subtidal biota. For soft substrate habitats recovery information is only available for severely polluted sites where recovery takes many years (Jones et al., 2008). Construction of the Sabah Al-Ahmad Sea City provides a unique opportunity to follow benthic recruitment and community development on a range of artificially created benthic habitats over time. The three phases completed were each flooded by the sea separately and annual ecological surveys allow comparison of colonisation patterns and community development rates over time. Species diversity similar to that seen in comparable natural open sea habitats is reached within 2-5 years for mixed sand/rock biota, but longer (2-6 years) for sand biota. Biotic abundance exceeds open sea levels within 1-2 years due to settlement of opportunistic species. Coral recruitment occurred within 3 years. Present data provides a reference point for recovery rates into none polluted benthic habitats for the Gulf. Copyright © 2012 Elsevier Ltd. All rights reserved.

Molecular phylogeny of the genus Chondracanthus (Rhodophyta), focusing on the resurrection of C. okamurae and the description of C. cincinnus sp. nov.

NASA Astrophysics Data System (ADS)

Yang, Mi Yeon; Kim, Myung Sook

2016-09-01

Determining the taxonomic status of the red algal genus Chondracanthus based on morphological characters is challenging due to the similarity and high degree of plasticity of the thallus. Since the taxonomic history of several Chondracanthus species remains unclear, we analyzed the plastid rbcL and mitochondrial COI genes of the specimens from Korea and Japan, in combination with morphological observations, to examine their phylogenetic relationships. Our results confirmed the distinction of C. okamurae, which is separated from C. intermedius, and identified a novel species, C. cincinnus sp. nov. Three species ( C. okamurae, C. intermedius and C. cincinnus) formed a monophyletic clade with C. tenellus. C. okamurae is distinguished by linear, narrow, cylindrical to compressed, slightly recurved axes, and a high-intertidal to subtidal distribution. It was collected from Korea and Japan, while C. intermedius was identified from Japan only. A new species, Chondracanthus cincinnus sp. nov., is characterized by linear, compressed, strongly recurved axes, and a low-intertidal to subtidal distiribution. Based on the molecular phylogeny using rbcL and COI data, we herein resurrect C. okamurae as a distinct species and identify C. cincinnus as a new species.

DEVELOPMENTAL PATTERN AND ADAPTATIONS FOR REPRODUCTION IN NUCELLA CRASSILABRUM AND OTHER MURICACEAN GASTROPODS.

PubMed

Gallardo, C S

1979-12-01

1. Eggs of Nucella crassilabrum range from 204 to 293 µm in diameter (mean = 240 µm). Only 6.6 to 7.9% are fertile; the remaining are ingested as nurse eggs. 2. Embryos metamorphose before hatching. Pre-hatching time ranges from 55 to 80 days according to seasonal temperature fluctuations. 3. Hatching size varies from 0.82 to 1.3 mm, depending on number of nurse-eggs ingested per embryo (from 3 to 20). Number of fertile embryos per capsule (10 to 122) depends on capsule size. 4. Hatching type and hatching size shown by N. crassilabrum agree with those of other muricaceans living in similar habitat conditions. 5. Pre-hatching time and hatching size data of various muricaceans are analyzed to determine to what extent they influence embryonic mode of nutrition, namely the presence of nurse-eggs or alternatively large and fertile self-sufficient eggs. Provision of nurse-eggs for embryos is of common occurrence among intertidal muricaceans and this mode of nutrition seems to have been favored in such habitats to reduce developmental time. Providing the yolk as nurse-eggs seems also to contribute to a larger hatching size, as suggested by some subtidal muricaceans with such embryo support patterns.

Summer use of the tidal freshwaters of the River Seine by three estuarine fish: Coupling telemetry and GIS spatial analysis

NASA Astrophysics Data System (ADS)

Le Pichon, C.; Coustillas, J.; Zahm, A.; Bunel, M.; Gazeau-Nadin, C.; Rochard, E.

2017-09-01

Acoustic telemetry and GIS-based spatial analysis were used to investigate the summer habitat use and movement patterns of three fish species in the tidal freshwaters of the Seine estuary (France). Experimental displacement of tagged individuals of thin-lipped grey mullet (Liza ramada), European eel (Anguilla anguilla), and common bream (Abramis brama) were conducted to test for their spatial fidelity and home range establishment. Most tagged individuals (95%) successfully returned to their previously occupied capture site, showing spatial homing abilities. The studied upstream tidal freshwater segment of the Seine estuary was regularly used by grey mullet as a part of its larger summer home range, while European eel and common bream were resident in this segment. The fidelity of eel to small nocturnal refuges and the regular use of intertidal waterbodies at high tide by grey mullet and bream suggested that they possess a capacity of acquiring spatial memory of habitats in a fluctuating environment. Importantly, the scale of movements travelled by each species was positively related to tidal phase. Grey mullet and bream, both visual feeders, exhibited short-term tidal movements to known habitats, providing food resources and contiguous resting habitat suggesting that they have shown behavioural strategies adaptive to fluctuating environments. Eel, in contrast, was found to have a different strategy strongly related to diel dynamics: it stayed in subtidal habitats rich in refuges that remained available at low tide. The results of this study emphasize the importance of restoring intertidal waterbodies and the relevance of considering the availability of adjacent subtidal habitats providing refuge at low tides.

Wind-driven upwelling effects on cephalopod paralarvae: Octopus vulgaris and Loliginidae off the Galician coast (NE Atlantic)

NASA Astrophysics Data System (ADS)

Otero, Jaime; Álvarez-Salgado, X. Antón; González, Ángel F.; Souto, Carlos; Gilcoto, Miguel; Guerra, Ángel

2016-02-01

Circulation patterns of coastal upwelling areas may have central consequences for the abundance and cross-shelf transport of the larval stages of many species. Previous studies have provided evidences that larvae distribution results from a combination of subtidal circulation, species-specific behaviour and larval sources. However, most of these works were conducted on organisms characterised by small-sized and abundant early life phases. Here, we studied the influence of the hydrography and circulation of the Ría de Vigo and adjacent shelf (NW Iberian upwelling system) on the paralarval abundance of two contrasting cephalopods, the benthic common octopus (Octopus vulgaris) and the pelagic squids (Loliginidae). We sampled repeatedly a cross-shore transect during the years 2003-2005 and used zero inflated models to accommodate the scarcity and patchy distribution of cephalopod paralarvae. The probability of catching early stages of both cephalopods was higher at night. Octopus paralarvae were more abundant in the surface layer at night whereas loliginids preferred the bottom layer regardless of the sampling time. Abundance of both cephalopods increased when shelf currents flowed polewards, water temperature was high and water column stability was low. The probability of observing an excess of zero catches decreased during the year for octopus and at high current speed for loliginids. In addition, the circulation pattern conditioned the body size distribution of both paralarvae; while the average size of the captured octopuses increased (decreased) with poleward currents at daylight (nighttime), squids were smaller with poleward currents regardless of the sampling time. These results contribute to the understanding of the effects that the hydrography and subtidal circulation of a coastal upwelling have on the fate of cephalopod early life stages.

Biogeochemical Controls on Biodegradation of MC252 Oil:Sand Aggregates on a Rapidly Eroding Coastal Headland Beach

NASA Astrophysics Data System (ADS)

Pardue, J.; Elango, V.; Urbano, M.; Lemelle, K.

2012-12-01

The research described below was conducted on Fourchon Beach, a coastal headland consisting of nine miles of fairly pristine sandy beaches and dunes, backed by wetlands and tidal channels, located between Belle Pass tidal inlet on the west and Elmer's Island on the east in Lafourche Parish, Louisiana. MC252 oil first arrived in large quantities on Fourchon Beach on or around May 20, 2010. A unique oil form created under these conditions was an aggregate of sand and emulsified oil, typically 0.1-10 cm in diameter, termed small surface residue balls (SSRBs). The work from this project made critical measurements on the factors controlling biodegradability of these SSRB aggregates. SSRB aggregates were sampled across transects perpendicular to the beach from the intertidal to the supratidal. Areas in the supratidal that were sampled initially were set aside for research purposes and not altered by any clean-up activities. Chemical composition of SSRBs was measured including concentrations of n-alkanes, PAHs, hopanes, nutrients (nitrate, nitrite, ammonium and orthophosphate measured on water extracts of SSRBs), and electron acceptor concentrations (O2 microprofiles measured on intact SSRBs and sulfate). Physical characterization of the SSRBs including length and area dimensions, mass, density, porosity, moisture content, and salinity using standard methods. Microbial characterization of SSRBs was also conducted using denaturing gradient gel electrophoresis and sequencing of dominant bands. SSRBs were sampled from various locations across the beach profile deposited by 2 significant tropical events in 2010; Hurricane Alex and TS Bonnie, and one event in 2011, TS Lee. Sampling focused on comparing and contrasting impacts of biogeochemistry on weathering of oil stranded in three beach microenvironments; supratidal surface; subtidal subsurface which is permanently inundated and intertidal subsurface samples which are intermittently inundated. The three types of oil are dramatically different in appearance and have a distinctive chemical signature indicative of different rates of weathering. Supratidal surface samples were depleted in n-alkanes and lower-molecular weight PAHs. Geochemically, aggregates located in these environments had low salinities (1.3-1.5 ppt), O2 at near saturation throughout the aggregates and nutrient concentrations (N and P) significantly lower than SSRBs deposited in the intertidal and subtidal. Intertidal and subtidal subsurface oil samples were characterized by elevated nutrient concentrations and salinities consistent with regular seawater inundation. Complete inundation leads to O2 consumption in the aggregates after several days. Despite the presence of elevated nutrients, PAHs and n-alkanes were comparatively unweathered in the subtidal subsurface samples consistent with O2 limitations. Sequences of known PAH degraders were isolated from the supratidal and intertidal aggregates. The results to be presented support the hypothesis that SSRBs deposited at different locations on the beach have different biogeochemical characteristics . These characteristics are due, in part, to their location on the landscape.

Spatial-temporal evolution of the eastern Nanhui mudflat in the Changjiang (Yangtze River) Estuary under intensified human activities

NASA Astrophysics Data System (ADS)

Zhang, Xiaodong; Zhang, Yexin; Zhu, Longhai; Chi, Wanqing; Yang, Zuosheng; Wang, Biying; Lv, Kai; Wang, Hongmin; Lu, Zhiyong

2018-05-01

The eastern Nanhui mudflat (ENM), located in the southern flank of the Changjiang (Yangtze River) Estuary, plays a key role in storm protection, defense against sea level rise, and land resource provision for Shanghai, China's largest city. Recently, there has been a great deal of concern for its evolutionary fate, since a drastic reduction in the Changjiang sediment discharge rate and an increased number of estuarine enclosures might negatively impact the environmental protection functions that this mudflat provides. In this paper, a novel method, which employed the envelope lines of instantaneous shoreline positions identified in 436 Landsat satellite images from 1975 to 2016, was used to demonstrate the evolution of the mudflat high and low tide lines in a detailed, quantitative way. Our study reveals the southeast progradation rate of the mudflat doubled from 24 m/yr in 713-1974 CE to 49 m/yr in 1975-1995 CE, probably due to the influence of the estuarine turbidity maximum zone shifting to the ENM. Under the ample sediment input directly from the turbidity maximum zone, the spatial evolution of the ENM was governed predominantly by the changing morphology of the South Passage due to the quick progradation of the ENM, which narrowed the South Passage by pushing the South Passage Trumpet southeastward. Therefore, the ENM experienced rapid accretion during 1975-2016. The accretion rate of the high tide line increased 2-13 times due to vegetation and intertidal enclosures, resulting in the rapid reduction of the intertidal area. The area decreased from 97 km2 in 1976 to 66 km2 in 1995, mainly due to vegetation, and continued decreasing to 12 km2 in 2006 due to the intertidal enclosures. In contrast, the accretion rate of the low tide line increased by 25 times due to subtidal enclosures and caused the intertidal area increased to 78 km2 in 2015. The almost disappeared intertidal zones in 2006 reappeared. However, this reappearance might be a temporary transitional state, and once the subtidal enclosures are completed, most of the intertidal zones will be replaced by enclosure land. Our study reveals that the drastic reduction in the Changjiang sediment flow to the sea has not caused a decline in the ENM. In contrast, the ENM has experienced rapid accretion in the past 40 years, resulting in the strengthening of its functional abilities to protect Shanghai, an unexpected outcome.

Effects of reclamation on macrobenthic assemblages in the coastline of the Arabian Gulf: a microcosm experimental approach.

PubMed

Naser, Humood A

2011-03-01

Coastal reclamation and modifications are extensively carried out in Bahrain, which may physically smother the coastal and subtidal habitats resulting in changes to abundance and distribution of macrobenthic assemblages. A microcosm laboratory experiment using three common macrobenthic invertebrates from a proposed reclaimed coastal area was preformed to examine their responses to mud burial using marine sediment collected from a designated borrow area. Significant difference in numbers of survived organisms between control and experimental treatments with a survival percentage of 41.8% for all of the selected species was observed. The polychaete Perinereis nuntia showed the highest percentage of survival (57.1%) followed by the bivalve Tellinavaltonis (42.3%) and the gastropod Cerithidea cingulata (24.0%). Quantifying species responses to sediment burial resulted from dredging and reclamation will aid in predicting the expected ecological impacts associated with coastal developments and subsequently minimizing these impacts and maintaining a sustainable use of coastal and marine ecosystems in the Arabian Gulf. Copyright © 2010 Elsevier Ltd. All rights reserved.

Macrobenthic turnover in the subtidal Wadden Sea: The Norderaue revisited after 60 years

NASA Astrophysics Data System (ADS)

Reise, K.; Schubert, A.

1987-03-01

The benthic macrofauna of a tidal inlet in the northern Wadden Sea was sampled with grab and dredge in 1924 1926 (Hagmeier & Kändler, 1927), and again in 1985 and 1986. The comparison of surveys from consecutive years, as well as observations from an adjacent area, are employed to separate spurious from real long-term changes. Several epibenthic species of the 1920s became rare or absent in the 1980s. Oyster beds and reefs of the colonial polychaete Sabellaria spinulosa have disappeared completely. On the other hand, mussel beds have extended their range, and the abundance of mobile infauna has increased. The total number of species has remained approximately the same. Compared to surveys from consecutive years, the 60-year interval has doubled the species turnover rate, and has decreased the similarity in relative abundances by one third. The observed losses are best explained by the impact of dredging and trawling on the benthic fauna, while gains seem to indicate coastal eutrophication.

Exceptional preservation of fossils in an Upper Proterozoic shale

NASA Technical Reports Server (NTRS)

Butterfield, N. J.; Knoll, A. H.; Swett, K.

1988-01-01

An exceptionally well-preserved and distinctive assemblage of Late Proterozoic fossils from subtidal marine shales is reported. In addition to the spheromorphic acritarchs and cyanobacteria sheaths routinely preserved in Proterozoic rocks, this assemblage includes multicellular algae, a diverse assortment of morphologically complex protistan vesicles, and probable heterotrophic bacteria. Thus, it provides one of the clearest and most taxonomically varied views of Proterozoic life yet reported.

Floating Ocean Platform

DTIC Science & Technology

2003-08-15

floating structures create novel habitats for subtidal epibiota?, MARINE ECOLOGY -PROGRESS SERIES, 43-52 Mar. Ecol.- Prog. Ser., 2002 Vegueria, SFJ Godoy... ECOLOGICAL APPLICATIONS, 350-366 Ecol. Appl., 2000 Niedzwecki, JM van de Lindt, JW Gage, JH Teigen, PS, Design estimates of surface wave interaction with...The ecological effects beyond the offshore platform, Coastal Zone: Proceedings of the Symposium on Coastal and Ocean Management, v 2, n pt2, 1989, p

DEMOGRAPHIC CONSEQUENCES OF COALESCENCE IN SPORELING POPULATIONS OF MAZZAELLA LAMINARIOIDES (GIGARTINALES, RHODOPHYTA)(1).

PubMed

Santelices, B; Alvarado, J L

2008-06-01

Coalescing macroalgae are ecologically important members of intertidal and shallow subtidal communities. However, we still lack quantitative information on the demographic consequences of coalescence. Using demographic models developed for modular invertebrates, we studied the demography of settlement and early recruitment in the coalescing macroalga Mazzaella laminarioides (Bory) Fredericq. Permanently marked microscopic fields on laboratory-incubated and field-incubated plates were monitored regularly (at 15, 30, 45, and 60 d) using image analysis techniques to evaluate the relative importance of settler abundance, mortality, coalescence (fusion), and fission on the changes in size and numbers of recruits. On the plates, spores settled individually or in groups. Over time, spores in close proximity may coalesce, resulting in a mixture of unisporic and multisporic crusts. When new spores arrive, they may or may not coalesce with previously settled crusts. Coalescence and mortality reduce the number of sporelings, but coalescence increases the size of the sporelings, thereby reducing further probability of sporeling mortality. Crust fissions are negligible in frequency, while the frequency of coalescence increases from ∼25% after only 3 d, to ∼75% after 60 d. Thus, as a result of variable settlement, mortality, and coalescence, any area colonized by M. laminarioides would contain a mixture of crusts of different sizes, ages, and genetic constitution. The interactions between the above three processes create a more complex survivorship curve than the ones known for unitary organisms. © 2008 Phycological Society of America.

[Growth adaptability of Zostera marina at different habitats of the Swan Lake in Rongcheng, China].

PubMed

Guo, Mei Yu; Li, Wen Tao; Yang, Xiao Long; Zhang, Xiu Mei; Liu, Jian Ying; Li, Chang Jun

2017-05-18

Eelgrass (Zostera marina), a seagrass species widely distributed in the coastal regions of northern hemisphere, has suffered with a great decline due to a variety of anthropogenic and environmental stresses. In order to examine the adaptability of eelgrass to different environmental stresses, studies on the morphology and reproductive capacity of eelgrass had been carried out monthly from November 2014 to October 2015 at four different habitats of the Swan Lake, including patch area inintertidal area and subtidal area, eelgrass meadow edge, and eelgrass meadow area. The results showed significant spatio-temporal variations in the morphological parameters and branch frequency of eelgrass shoots at different habitats of the Swan Lake. The highest values of leaf length, leaf width, aboveground/belowground biomass, and internode length/diameter were observed in the meadow area, i.e., 78.54 cm, 7.93 mm, 7.03 and 3.88, respectively, while the highest branch frequency was observed in the meadow edge (88.4%). The plasticity index for aboveground/belowground biomass was higher (ranging from 0.77 to 0.92) at the four habitats, but those for the leaf width was slightly lower (ranging from 0.41 to 0.64). The number of spathes in each shoot showed no significant difference at different habitats, whereas the number of spathes per unit area was significantly different. Clonal reproduction was more dominant in meadow area than in the patch area where human disturbance was high.

Effects of the Relaxation of Upwelling-Favorable Winds on the Diurnal and Semidiurnal Water Temperature Fluctuations in the Santa Barbara Channel, California

NASA Astrophysics Data System (ADS)

Aristizábal, María. F.; Fewings, Melanie R.; Washburn, Libe

2017-10-01

In the Santa Barbara Channel, California, and around the Northern Channel Islands, water temperature fluctuations in the diurnal and semidiurnal frequency bands are intermittent, with amplitudes that vary on time scales of days to weeks. The cause of this intermittency is not well understood. We studied the effects of the barotropic tide, vertical stratification, propagation of coastal-trapped waves, regional wind relaxations, and diurnal-band winds on the intermittency of the temperature fluctuations during 1992-2015. We used temperature data from 43 moorings in 10-200 m water depth and wind data from two buoys and one land station. Subtidal-frequency changes in vertical stratification explain 20-40% of the intermittency in diurnal and semidiurnal temperature fluctuations at time scales of days to weeks. Along the mainland north of Point Conception and at the Northern Channel Islands, the relaxation of upwelling-favorable winds substantially increases vertical stratification, accounting for up to 55% of the subtidal-frequency variability in stratification. As a result of the enhanced stratification, wind relaxations enhance the diurnal and semidiurnal temperature fluctuations at those sites, even though the diurnal-band wind forcing decreases during wind relaxation. A linear model where the background stratification is advected vertically explains a substantial fraction of the temperature fluctuations at most sites. The increase of vertical stratification and subsequent increase in diurnal and semidiurnal temperature fluctuations during wind relaxation is a mechanism that can supply nutrients to the euphotic zone and kelp forests in the Channel in summer when upwelling is weak.

Effects of tidal inundation on benthic macrofauna associated with the eelgrass Zostera muelleri

NASA Astrophysics Data System (ADS)

Nicastro, Andrea; Bishop, Melanie J.

2013-01-01

Processes, such as sea level rise, that alter tidal inundation regimes have the potential to modify the structure of seagrasses and their dense and diverse faunal communities. This study tested the hypothesis that seagrass-dwelling invertebrate communities would vary across a tidal inundation gradient as a result of direct effects of tidal inundation and indirect effects, arising from changes in seagrass morphology across this gradient. First, we conducted mensurative sampling across tidal inundation gradients to assess how above- and below-ground seagrass biomass, and epi- and infaunal invertebrate communities co-varied with depth. Second, we ran a manipulative field experiment, utilising artificial seagrass rhizomes of varying morphologies, to separate out direct effects of tidal inundation on infaunal communities from indirect effects arising from changes in seagrass root morphology. Mensurative sampling revealed that the abundance and taxon richness of seagrass epi- and infauna, and the above- and below-ground biomass of seagrass each increased with depth across a tidal elevation gradient extending from the high intertidal to the shallow subtidal. The manipulative experiment revealed that the relative importance of direct and indirect effects of tidal inundation in determining the distribution and abundance of infauna were taxon-specific. In general, however, the facilitative effects of rhizome structure were more evident at the intertidal compared to the subtidal elevation. Our results indicate that changes to tidal inundation regime will affect seagrass-dwelling macroinvertebrates through a combination of direct and indirect effects. Therefore, future changes in tidal inundation should be taken into account in developing conservation plans for protecting seagrasses and the biodiversity they sustain.

Heat-shock response and antioxidant defense during air exposure in Patagonian shallow-water limpets from different climatic habitats.

PubMed

Pöhlmann, Kevin; Koenigstein, Stefan; Alter, Katharina; Abele, Doris; Held, Christoph

2011-11-01

Climate warming involves not only a rise of air temperature means, but also more frequent heat waves in many regions on earth, and is predicted to intensify physiological stress especially in extremely changeable habitats like the intertidal. We investigated the heat-shock response (HSR) and enzymatic antioxidant defense levels of Patagonian shallow-water limpets, adapted to distinct tidal exposure conditions in the sub- and intertidal. Limpets were sampled in the temperate Northern Patagonia and the subpolar Magellan region. Expression levels of two Hsp70 genes and activities of the antioxidants superoxide dismutase (SOD) and catalase (CAT) were measured in submerged and 2- and 12-h air-exposed specimens. Air-exposed Patagonian limpets showed a tiered HSR increasing from South to North on the latitudinal gradient and from high to low shore levels on a tidal gradient. SOD activities in the Magellan region correlated with the tidal rhythm and were higher after 2 and 12 h when the tide was low at the experimental site compared to the 6 h value taken at high tide. This pattern was observed in intertidal and subtidal specimens, although subtidal individuals are little affected by tides. Our study shows that long-term thermal adaptation shapes the HSR in limpets, while the oxidative stress response is linked to the tidal rhythm. Close to the warm border of their distribution range, energy expenses to cope with stress might become overwhelming and represent one cause why the limpets are unable to colonize the shallow intertidal zone.

Polychlorinated biphenyls in two salt marsh sediments of the Venice Lagoon.

PubMed

Mugnai, Cristian; Giuliani, Silvia; Bellucci, Luca G; Carraro, Claudio; Favotto, Maurizio; Frignani, Mauro

2011-10-01

Polychlorinated biphenyls (PCBs) were measured in two dated salt marsh cores of the Venice Lagoon to assess their input chronology and to evaluate the importance of atmospheric deposition as a source. Sampling sites were chosen in order to evidence the differences between areas located leeward and windward with respect to inputs originating in both the city of Venice and the industrial area. Concentrations of PCB indicators (0.13-15.6 ng g⁻¹) increased gradually from the 1930s, reached maxima from the 1950s to the late 1970s, and then decreased. PCB loadings to marshes are driven by both the atmospheric deposition and the resuspension of subtidal sediments, this latter being more important for heavier congeners. The downwind marsh recorded higher fluxes (0.06-9.72 ng cm⁻² year⁻¹) than the upwind one (0.01-0.53 ng cm⁻² year⁻¹). Recent fluxes are rather consistent with bulk deposition measurements. A higher contribution of CB-101 and CB-118 was detected in the intermediate layers of the downwind site, suggesting a different PCB source for the corresponding time interval. In the other marsh, PCBs showed a rather constant composition at all levels (mostly CB-153, CB-138 and CB-180), accounting for a regional influence. Deep layers showed an enrichment of higher chlorinated congeners at both sites, whereas recent samples conserve the patterns typical of surficial and subsurficial subtidal sediments. The scientific approach adopted in this research can be considered as a sort of methodological procedure for the determination of fluxes and pathways of PCBs through the study of marsh cores.

Cyclicity in Upper Mississippian Bangor Limestone, Blount County, Alabama

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bronner, R.L.

1988-01-01

The Upper Mississippian (Chesterian) Bangor Limestone in Alabama consists of a thick, complex sequence of carbonate platform deposits. A continuous core through the Bangor on Blount Mountain in north-central Alabama provides the opportunity to analyze the unit for cyclicity and to identify controls on vertical facies sequence. Lithologies from the core represent four general environments of deposition: (1) subwave-base, open marine, (2) shoal, (3) lagoon, and (4) peritidal. Analysis of the vertical sequence of lithologies in the core indicates the presence of eight large-scale cycles dominated by subtidal deposits, but defined on the basis of peritidal caps. These large-scale cyclesmore » can be subdivided into 16 small-scale cycles that may be entirely subtidal but illustrate upward shallowing followed by rapid deepening. Large-scale cycles range from 33 to 136 ft thick, averaging 68 ft; small-scale cycles range from 5 to 80 ft thick and average 34 ft. Small-scale cycles have an average duration of approximately 125,000 years, which is compatible with Milankovitch periodicity. The large-scale cycles have an average duration of approximately 250,000 years, which may simply reflect variations in amplitude of sea level fluctuation or the influence of tectonic subsidence along the southeastern margin of the North American craton.« less

Thiosulfate and sulfite distributions in porewater of marine sediments related to manganese, iron, and sulfur geochemistry

NASA Astrophysics Data System (ADS)

Thamdrup, Bo; Finster, Kai; Fossing, Henrik; Hansen, Jens Würgler; Jørgensen, Bo Barker

1994-01-01

Depth distributions of thiosulfate (S 2O 32-) and sulfite (SO 32-) were measured in the porewaters of a Danish salt marsh and subtidal marine sediments by HPLC analysis after derivatization with DTNP [2,2'-dithiobis(5-nitropyridine)]. The distributions were compared to the redox zonation as indicated by Eh and Mn 2+, Fe 2+ and H 2S distributions. Concentrations of S 2O 32- varied from below detection (<50 nM) to 600 nM while SO 32- concentrations generally were 2-3 times higher, 100-1500 nM. Depth distributions of the two species were roughly similar. Lowest concentrations were found in the oxidized zone, including both the oxic surface layer and the suboxic zone of intense manganese and iron reduction, and concentrations tended to increase through the suboxic and into the reduced, sulfidic zone. The similarity of SO 32- and S 2O 32- profiles suggested a close coupling of the cycling of the two species. Rates of consumption were suggested as the main factor governing their distribution. Rapid turnover times for S 2O 32- and H 2S of 4 and 1.1 h, respectively, were estimated for the upper 0-1 cm of a subtidal sediment.

Chitons (Mollusca, Polyplacophora) from Alacranes Reef, Yucatan, Mexico

PubMed Central

Reyes-Gómez, Adriana; Ortigosa, Deneb; Simões, Nuno

2017-01-01

Abstract This study represents the first comprehensive chiton study from Alacranes Reef, the largest reef system in the Gulf of Mexico. Nine chiton species were found in seven localities within the area, in the intertidal and subtidal to 12 m depth. SEM examination of C. janeirensis, A. hemphilli, T. schrammi and C. floridanus, showed variations in the sculpture and radular teeth morphology when compared to specimens of the same species from Florida Keys, Bahamas and Puerto Rico. The distribution ranges of T. schrammi, L. liozonis and S. floridana are extended into the south-western area of the Gulf of Mexico. Altogether, combining previous literature and the present survey, reports eleven chiton species which have now been recorded within the Alacranes reef area. PMID:28769624

Macrobenthic diversity and sediment-water exchanges of oxygen and ammonium: Example of two subtidal communities of the eastern English Channel

NASA Astrophysics Data System (ADS)

Tous Rius, Armonie; Denis, Lionel; Dauvin, Jean-Claude; Spilmont, Nicolas

2018-06-01

In organic-rich shallow habitats, benthic macrofauna is known to play a major role in the geochemical functioning of surficial sediments through its metabolism, as well as its bioirrigation and/or bioturbation activity. In this paper, the effects of benthic macrofauna on metabolic fluxes at the sediment-water interface were studied at four dates, from winter to late summer, on two major macrobenthic communities of the eastern English Channel (macrotidal system): the fine sand Abra alba community (2 stations) and the sandy gravel Ophiothrix fragilis community (1 station). Oxygen and ammonium fluxes showed temporal changes that could be attributed to the variation of sea water temperature. Once the effect of temperature removed (using Q10 = 2.5), the average fauna mediated fluxes (FFauna) represented respectively 77% and 76% of average total fluxes. Considering the whole dataset, species number and biomass showed a significant correlation with fauna mediated fluxes of O2 and NH4+, while the relationships with abundance were not significant. The species composition of the community might influence ecosystem functioning, but in the present study, functional groups have a very poor relationship with FFauna (O2) and FFauna (NH4+). Despite the presence of engineer species, establishing general and simple rules to link macrofaunal parameters to functional attributes remains very difficult, suggesting that communities rather followed the idiosyncrasy and rivet hypothesis.

Long-term change in eelgrass distribution at Bahía San Quintín, Baja California, Mexico, using satellite imagery

USGS Publications Warehouse

Ward, David H.; Morton, Alexandra; Tibbitts, T. Lee; Douglas, David C.; Carrera-Gonzalez, Eduardo

2003-01-01

Seagrasses are critically important components of many marine coastal and estuarine ecosystems, but are declining worldwide. Spatial change in distribution of eelgrass, Zostera marina L., was assessed at Bahía San Quintín, Baja California, Mexico, using a map to map comparison of data interpreted from a 1987 Satellite Pour l'Observation de la Terre multispectral satellite image and a 2000 Landsat Enhanced Thematic Mapping image. Eelgrass comprised 49% and 43% of the areal extent of the bay in 1987 and 2000, respectively. Spatial extent of eelgrass was 13% less (-321 ha) in 2000 than in 1987 with most losses occurring in subtidal areas. Over the 13-yr study period, there was a 34% loss of submerged eelgrass (-457 ha) and a 13% (+136 ha) gain of intertidal eelgrass. Within the two types of intertidal eelgrass, the patchy cover class (<85% cover) expanded (+250 ha) and continuous cover class (≥85% cover) declined (-114 ha). Most eelgrass losses were likely the result of sediment loading and turbidity caused by a single flooding event in winter of 1992-1993. Recent large-scale agricultural development of adjacent uplands may have exacerbated the effects of the flood. Oyster farming was not associated with any detectable losses in eelgrass spatial extent, despite the increase in number of oyster racks from 57 to 484 over the study period.

Submarine groundwater discharges create unique benthic communities in a coastal sandy marine environment

NASA Astrophysics Data System (ADS)

Leitão, Francisco; Encarnação, João; Range, Pedro; Schmelz, Rüdiger M.; Teodósio, Maria A.; Chícharo, Luís

2015-09-01

In this study we assessed the small-scale effects of submarine groundwater discharges (SGD) on macrofaunal assemblages associated with shallow sandy sediments along the south coast of Portugal. Corer samples were collected in a (1) subtidal seep, (2) at the edge of the seep (periphery) and (3) in the surrounding area. Community structure varied across areas, with diversity, species richness and evenness generally low at seep relatively to the surrounding area. Community composition within the seep was reduced to a small number of taxa, although total abundance was similar between seeps and surrounding areas. The seep was characterized by a distinct hydrological environment, with lower salinity and pH, relative to the surroundings sandy areas. More than 93% of the benthic macrofauna in the seep was dominated by Lumbricillus lineatus (enchytraeid oligochaetes). This study is the first to record the presence of this euryaline species in Portuguese marine waters. In the surrounding area Spionidae Polychaetes and Bathyporeia sp. (Amphipoda) were the most frequent and abundant taxa. These findings provide evidence for a direct association between SGD effect and the composition of benthic marine assemblages. The patchy habitat created by groundwater seep allowed euryhaline species with short and fast recruitment times to occur in a fully marine environment. Whether this pattern is consistent, or only occurs when smooth favorable sea conditions are not superimposed on the groundwater effect remains uncertain.

Zur Biologie von Paramphiascella fulvofasciata (Copepoda, Harpacticoida)

NASA Astrophysics Data System (ADS)

Dahms, Hans-Uwe

1986-09-01

The benthic harpacticoid copepod Paramphiascella fulvofasciata Rosenfield & Coull was collected from holdfasts of Laminaria hyperborea from a subtidal area of Helgoland (North Sea). All developmental stages of P. fulvofasciata are raptorial feeders. The feeding of the nauplii is advanced by a marginal setule-crest of the labrum which prevents food-particles from being swept away. The oral appendages of the copepodites circumscribe a frustal space ventral to the mouth which facilitates uptake of food-particles. The nauplii are not able to swim and perform stalking movements with their antennal endopodites. Good swimming ability as well as digging-in-behaviour and negative phototaxis of the copepodites indicate epi- as well as inbenthic mode of life. Several life-cycle characters are described. Precopula lasts ca. one day. The mean egg-number is 27, and mean egg-diameter is 87 × 75 µm. The number of nauplii per egg (double)-sac amounts to 25 30. Developmental time at 19°C is 6 9 days (nauplii) and 20 24 days (copepodites). The whole developmental period lasts 28 days. The maximal lifespan in the laboratory is 193 days. Sex-ratio is almost balanced. Females produce egg-sacs more than 3.5 times during their life period. Seasonal effects on reproductive activity have not been detected in laboratory cultures.

Increasing species richness of the macrozoobenthic fauna on tidal flats of the Wadden Sea by local range expansion and invasion of exotic species

NASA Astrophysics Data System (ADS)

Beukema, J. J.; Dekker, R.

2011-06-01

A 40-y series of consistently collected samples (15 fixed sampling sites, constant sampled area of 15 × 0.95 m2, annual sampling only in late-winter/early-spring seasons, and consistent sieving and sorting procedures; restriction to 50 easily recognizable species) of macrozoobenthos on Balgzand, a tidal flat area in the westernmost part of the Wadden Sea (The Netherlands), revealed significantly increasing trends of species richness. Total numbers of species annually encountered increased from ~28 to ~38. Mean species density (number of species found per sampling site) increased from ~13 to ~18 per 0.95 m2. During the 40 years of the 1970-2009 period of observation, 4 exotic species invaded the area: (in order of first appearance) Ensis directus, Marenzelleria viridis, Crassostrea gigas, and Hemigrapsus takanoi. Another 5 species recently moved to Balgzand from nearby (subtidal) locations. Together, these 9 new species on the tidal flats explained by far most of the increase in total species numbers, but accounted for only one-third of the observed increase in species density (as a consequence of the restricted distribution of most of them). Species density increased particularly by a substantial number of species that showed increasing trends in the numbers of tidal flat sites they occupied. Most of these wider-spreading species were found to suffer from cold winters. During the 40-y period of observation, winter temperatures rose by about 2°C and cold winters became less frequent. The mean number of cold-sensitive species found per site significantly increased by almost 2 per 0.95 m2. Among the other species (not sensitive to low winter temperatures), 6 showed a rising and 2 a declining trend in number of occupied sites, resulting in a net long-term increase in species density amounting to another gain of 1.6 per 0.95 m2. Half of the 50 studied species did not show such long-term trend, nor were invaders. Thus, each of 3 groups (local or alien invaders/winter-sensitive species/other increasing species) contributed to a roughly similar extent to the overall increase in species density.

Invasive Marine and Estuarine Animals of the Pacific Northwest and Alaska

DTIC Science & Technology

2005-09-01

or never be realized at all depending on the characteristics of the individual species and the conditions into which it is introduced. Figure 1...including rocky intertidal, unvegetated intertidal and subtidal mud and sand, salt marsh, and seagrass. Capable of tolerating a wide range of salinity ...and temperature, it prefers mesohaline to polyhaline salinities (10-30 ppt) and temperatures between 3 and 26 °C (Grosholz and Ruiz 2002). The green

The Role of Seagrasses and Kelps in Marine Fish Support

DTIC Science & Technology

2006-02-01

In contrast, Murphy et al. (2000) found an average of 7.4 rockfish per seine in eelgrass habitat near Craig , Alaska. Of the rockfish, 97 percent...to be closely associated with eelgrass near Craig , Alaska (Dean et al. 2000). Forage fishes. Forages fishes are mentioned in this review due to...ERDC TN-WRAP-06-1 February 2006 10 adjacent subtidal habitats near Craig , Alaska, indicated that more fish species were captured in either

Facies analysis and depositional environments of upper part of Richmond group (upper Ordovician), Richmond, Indiana, to Xenia, Ohio

DOE Office of Scientific and Technical Information (OSTI.GOV)

Betz, C.E.; Martin, W.D.

Rock sections of the Drakes, Elkhorn, and Whitewater Formations were studied along an east-west-trending line in order to distinguish facies changes in a slope direction across the paleodepositional basin. The Richmond limestones, shales, and dolostones formed from fine-grained, terrigenous and carbonate sediments deposited on a shallow marine ramp within the humid, tropical, low latitudes of the Southern Hemisphere. Depositional environments on the ramp are represented by five main facies type. The five Richmond facies form a subtidal to supratidal shallowing-upward sequence. This progressive shallowing during the Late Ordovician resulted from the westward regional progradation of Queenston deltaic facies.

The distribution and utility of sea-level indicators in Eurasian sub-Arctic salt marshes (White Sea, Russia).

NASA Astrophysics Data System (ADS)

Nikitina, Daria; Kemp, Andrew; Horton, Benjamin; Van, Christopher; Potapova, Marina; Culver, Stephen; Repkina, Tatyana; Hill, David

2017-04-01

We investigated the utility of foraminifera, diatoms and bulk-sediment geochemistry (δ13C and parameters measured by RockEval pyrolysis) as sea-level indicators in Eurasian sub-Arctic salt marshes. At three salt marshes in Dvina Bay (White Sea, Russia), we collected surface sediment samples along transects sequentially crossing sub-tidal, tidal-flat, salt-marsh and Taiga forest environments. Foraminifera formed bipartite assemblages, where elevations below mean high higher water (MHHW) were dominated by Miliammina spp. and elevations between MHHW and the highest occurrence of foraminifera were dominated by Jadammina macrescens and Balticammina pseudomacrescens. Both assemblages existed on all three transects and we conclude that foraminifera are sea-level indicators in Eurasian sub-Arctic salt marshes. Five, high-diversity groups of diatoms were identified and they displayed geographic variability among the study sites (<15 km apart). RockEval pyrolysis and δ13C measurements recognized two groups (clastic-dominated environments below MHHW and organic-rich environments above MHHW). Since one group included sub-tidal elevations and the other supra-tidal elevations, we conclude that the measured geochemical parameters do not meet the criteria for being stand-alone sea-level indicators. Core JT2012 captured a regressive sediment sequence of clastic, tidal-flat sediment overlain by salt-marsh organic silt and freshwater peat. The salt-marsh sediment accumulated at 2804 ± 52 years BP years before present and preserved foraminifera (J. macrescens and B. pseudomacrescens) with a high degree of analogy to modern assemblages indicating that relative sea level was 2.60 ± 0.47 m above present at this time. Diatoms confirm that marine influence decreased through time, but the lack of analogy between modern and core assemblages limits their utility as sea-level indicators in this setting.

Energetic constraints, size gradients, and size limits in benthic marine invertebrates.

PubMed

Sebens, Kenneth P

2002-08-01

Populations of marine benthic organisms occupy habitats with a range of physical and biological characteristics. In the intertidal zone, energetic costs increase with temperature and aerial exposure, and prey intake increases with immersion time, generating size gradients with small individuals often found at upper limits of distribution. Wave action can have similar effects, limiting feeding time or success, although certain species benefit from wave dislodgment of their prey; this also results in gradients of size and morphology. The difference between energy intake and metabolic (and/or behavioral) costs can be used to determine an energetic optimal size for individuals in such populations. Comparisons of the energetic optimal size to the maximum predicted size based on mechanical constraints, and the ensuing mortality schedule, provides a mechanism to study and explain organism size gradients in intertidal and subtidal habitats. For species where the energetic optimal size is well below the maximum size that could persist under a certain set of wave/flow conditions, it is probable that energetic constraints dominate. When the opposite is true, populations of small individuals can dominate habitats with strong dislodgment or damage probability. When the maximum size of individuals is far below either energetic optima or mechanical limits, other sources of mortality (e.g., predation) may favor energy allocation to early reproduction rather than to continued growth. Predictions based on optimal size models have been tested for a variety of intertidal and subtidal invertebrates including sea anemones, corals, and octocorals. This paper provides a review of the optimal size concept, and employs a combination of the optimal energetic size model and life history modeling approach to explore energy allocation to growth or reproduction as the optimal size is approached.

The relationship of environmental factors to the structure and distribution of subtidal seaweed vegetation of the western Basque coast (N Spain)

NASA Astrophysics Data System (ADS)

Díez, I.; Santolaria, A.; Gorostiaga, J. M.

2003-04-01

Subtidal vegetation distribution patterns in relation to environmental conditions (pollution, wave exposure, sedimentation, substratum slope and depth) were studied along the western Basque coast, northern Spain, by applying canonical correspondence analysis and log-linear regressions. A total of 90 species of macrophytes were recorded by systematic sampling along 21 transects. Mesophyllum lichenoides and Cystoseira baccata were the most abundant (accounting for 47% of the overall algal cover). Gelidium sesquipedale, Pterosiphonia complanata, Zanardinia prototypus, Codium decorticatum and Asparagopsis armata ( Falkenbergia phase) were other macrophytes with significant cover. Ordination analysis indicates that the five environmental variables explored account between them for 52% of the species data variance. Pollution, sedimentation and wave exposure were the principal factors explaining differences in flora composition and abundance (24, 14 and 12% of the explained variance, respectively). Log-linear regressions and canonical correspondence analyses reveal that C. baccata and G. sesquipedale exhibit a negative relationship with pollution, while sediment loading negatively affects G. sesquipedale, and C. baccata cannot stand high wave exposure levels. In contrast, P. complanata and C. decorticatum show a positive relationship with pollution and can bear high levels of sedimentation and wave exposure. M. lichenoides and Z. prototypus present a wide tolerance range for all these factors. Macroalgal cover, species richness and diversity remain practically constant from unpolluted to slightly polluted sites, but they decrease sharply under moderately polluted conditions. In the same way, algal cover decreases as sediment loading increases, but diversity and species richness show the highest values at intermediate levels of sedimentation. In relation to wave exposure, maximum algal cover was achieved at very exposed habitats whereas diversity and species richness were higher under semi-exposed conditions.

Tracking the Fate of Explosive-Trinitrotriazine (RDX) in Coastal Marine Ecosystems Using Stable Isotopic Tracer

NASA Astrophysics Data System (ADS)

Ariyarathna, T. S.; Ballentine, M.; Vlahos, P.; Smith, R. W.; Bohlke, J. K.; Tobias, C. R.; Fallis, S.; Groshens, T.; Cooper, C.

2017-12-01

It has been estimated that there are hundreds of explosive-contaminated sites all over the world and managing these contaminated sites is an international challenge. As coastal zones and estuaries are commonly impacted zones, it is vital to understand the fate and transport of munition compounds in these environments. The demand for data on sorption, biodegradation and mineralization of trinitrotriazine (RDX) in coastal ecosystems is the impetus for this study using stable nitrogen isotopes to track its metabolic pathways. Mesocosm experiments representing subtidal vegetated, subtidal unvegetated and intertidal marsh ecocosms were conducted. Steady state concentrations of RDX were maintained in the systems throughout two-week time duration of experiments. Sediment, pore-water and overlying water samples were analyzed for RDX and degradation products. Isotope analysis of the bulk sediments revealed an initial rising inventory of 15N followed by a decay illustrating the role of sediments on sorption and degradation of RDX in anaerobic sediments respectively. Both pore-water and overlying water samples were analyzed for 15N inventories of different inorganic nitrogen pools including ammonium, nitrate, nitrite, nitrous oxide and nitrogen gases. RDX is mineralized to nitrogen gas through a series of intermediates leaving nitrous oxide as the prominent metabolite of RDX. Significant differences in RDX metabolism were observed in the three different ecosystems based on sediment characteristics and redox conditions in the systems. Fine grained organic carbon rich sediments show notably higher mineralization rates of RDX in terms of production of its metabolites. Quantification of degradation and transformation rates leads to mass balances of RDX in the systems. Further analysis of results provides insights for mineralization pathways of RDX into both organic and inorganic nitrogen pools entering the marine nitrogen cycle.

Early Triassic environmental dynamics and microbial development during the Smithian-Spathian transition (Lower Weber Canyon, Utah, USA)

NASA Astrophysics Data System (ADS)

Grosjean, Anne-Sabine; Vennin, Emmanuelle; Olivier, Nicolas; Caravaca, Gwénaël; Thomazo, Christophe; Fara, Emmanuel; Escarguel, Gilles; Bylund, Kevin G.; Jenks, James F.; Stephen, Daniel A.; Brayard, Arnaud

2018-01-01

The Early Triassic biotic recovery following the end-Permian mass extinction is well documented in the Smithian-Spathian Thaynes Group of the western USA basin. This sedimentary succession is commonly interpreted as recording harsh conditions of various shallow marine environments where microbial structures flourished. However, recent studies questioned the relevance of the classical view of long-lasting deleterious post-crisis conditions and suggested a rapid diversification of some marine ecosystems during the Early Triassic. Using field and microfacies analyses, we investigate a well-preserved Early Triassic marine sedimentary succession in Lower Weber Canyon (Utah, USA). The identification of microbial structures and their depositional settings provide insights on factors controlling their morphologies and distribution. The Lower Weber Canyon sediments record the vertical evolution of depositional environments from a middle Smithian microbial and dolosiliciclastic peritidal system to a late Smithian-early Spathian bioclastic, muddy mid ramp. The microbial deposits are interpreted as Microbially Induced Sedimentary Structures (MISS) that developed either (1) in a subtidal mid ramp where microbial wrinkles and chips are associated with megaripples characterizing hydrodynamic conditions of lower flow regime, or (2) in protected areas of inter- to subtidal inner ramp where they formed laminae and domal structures. Integrated with other published data, our investigations highlight that the distribution of these microbial structures was influenced by the combined effects of bathymetry, hydrodynamic conditions, lithology of the substrat physico-chemical characteristics of the depositional environment and by the regional relative sea-level fluctuations. Thus, we suggest that local environmental factors and basin dynamics primarily controlled the modalities of microbial development and preservation during the Early Triassic in the western USA basin.

Acoustic-tracking and radio-tracking of horseshoe crabs to assess spawning behavior and subtidal habitat use in delaware bay

USGS Publications Warehouse

Brousseau, L.J.; Sclafani, M.; Smith, D.R.; Carter, Daniel B.

2004-01-01

This study used telemetry to determine spawning behavior and subtidal habitat use of horseshoe crabs Limulus polyphemus. We attached combined acoustic and radio transmitters to 12 gravid female horseshoe crabs at Ted Harvey Beach and 12 at North Bowers Beach (both on the western shore of Delaware Bay) over a 5-d period before peak spawning on the new moon. Horseshoe crabs were acoustically tracked and radio-tracked daily for 8 d during both high tides and during the incoming dominant (higher) high tide. All horseshoe crabs were relocated at least once, and 83% of females spawned from two to six times (x?? = 3.35, SE = 0.18). Of these females, 85% spawned on two to five consecutive nights (x?? = 3.31, SE = 0.59). Most (95%) females spawned on the beaches where they were initially tagged. Typically, the shoreline used by an individual for spawning ranged from 70 to 1,160 m (x?? = 351 m, SE = 38 m). Between spawning events, horseshoe crabs remained 50-715 m offshore (x?? = 299 m, SE = 57 m) from their established spawning beaches. Following the new moon, all but one (96%) moved out of range of our survey area, which extended approximately 1 km from the shoreline. Multistate mark-recapture models were used to estimate recapture probabilities and daily probabilities of spawning and departure from the vicinity of the spawning beaches. The probability of recapture by acoustic telemetry was high and estimated to be 0.95 (95% confidence interval, 0.73-0.99). Horseshoe crabs equipped with acoustic and radio transmitters have high rates of recapture, can be tracked continually, and can be relocated in both foreshore and inshore habitats.

Relationships Between Sand and Water Quality at Recreational Beaches

PubMed Central

Phillips, Matthew C.; Solo-Gabriele, Helena M.; Piggot, Alan M.; Klaus, James S.; Zhang, Yifan

2011-01-01

Enterococci are used to assess the risk of negative human health impacts from recreational waters. Studies have shown sustained populations of enterococci within sediments of beaches but comprehensive surveys of multiple tidal zones on beaches in a regional area and their relationship to beach management decisions are limited. We sampled three tidal zones on eight South Florida beaches in Miami-Dade and Broward counties and found that enterococci were ubiquitous within South Florida beach sands although their levels varied greatly both among the beaches and between the supratidal, intertidal and subtidal zones. The supratidal sands consistently had significantly higher (p<0.003) levels of enterococci (average 40 CFU/g dry sand) than the other two zones. Levels of enterococci within the subtidal sand correlated with the average level of enterococci in the water (CFU/100mL) for the season during which samples were collected (rs= 0.73). The average sand enterococci content over all the zones on each beach correlated with the average water enterococci levels of the year prior to sand samplings (rs=0.64) as well as the average water enterococci levels for the month after sand samplings (rs=0.54). Results indicate a connection between levels of enterococci in beach water and sands throughout South Florida’s beaches and suggest that the sands are one of the predominant reservoirs of enterococci impacting beach water quality. As a result, beaches with lower levels of enterococci in the sand had fewer exceedences relative to beaches with higher levels of sand enterococci. More research should focus on evaluating beach sand quality as a means to predict and regulate marine recreational water quality. PMID:22071324

Relationships between sand and water quality at recreational beaches.

PubMed

Phillips, Matthew C; Solo-Gabriele, Helena M; Piggot, Alan M; Klaus, James S; Zhang, Yifan

2011-12-15

Enterococci are used to assess the risk of negative human health impacts from recreational waters. Studies have shown sustained populations of enterococci within sediments of beaches but comprehensive surveys of multiple tidal zones on beaches in a regional area and their relationship to beach management decisions are limited. We sampled three tidal zones on eight South Florida beaches in Miami-Dade and Broward counties and found that enterococci were ubiquitous within South Florida beach sands although their levels varied greatly both among the beaches and between the supratidal, intertidal and subtidal zones. The supratidal sands consistently had significantly higher (p < 0.003) levels of enterococci (average 40 CFU/g dry sand) than the other two zones. Levels of enterococci within the subtidal sand correlated with the average level of enterococci in the water (CFU/100mL) for the season during which samples were collected (r(s) = 0.73). The average sand enterococci content over all the zones on each beach correlated with the average water enterococci levels of the year prior to sand samplings (r(s) = 0.64) as well as the average water enterococci levels for the month after sand samplings (r(s) = 0.54). Results indicate a connection between levels of enterococci in beach water and sands throughout South Florida's beaches and suggest that the sands are one of the predominant reservoirs of enterococci impacting beach water quality. As a result, beaches with lower levels of enterococci in the sand had fewer exceedences relative to beaches with higher levels of sand enterococci. More research should focus on evaluating beach sand quality as a means to predict and regulate marine recreational water quality. Copyright © 2011 Elsevier Ltd. All rights reserved.

Relationships between microbial communities and environmental parameters at sites impacted by mining of volcanogenic massive sulfide deposits, Prince William Sound, Alaska

USGS Publications Warehouse

Foster, A.L.; Munk, L.; Koski, R.A.; Shanks, Wayne C.; Stillings, L.L.

2008-01-01

The relations among geochemical parameters and sediment microbial communities were examined at three shoreline sites in the Prince William Sound, Alaska, which display varying degrees of impact by acid-rock drainage (ARD) associated with historic mining of volcanogenic massive sulfide deposits. Microbial communities were examined using total fatty acid methyl esters (FAMEs), a class of compounds derived from lipids produced by eukaryotes and prokaryotes (bacteria and Archaea); standard extraction techniques detect FAMEs from both living (viable) and dead (non-viable) biomass, but do not detect Archaeal FAMEs. Biomass and diversity (as estimated by FAMEs) varied strongly as a function of position in the tidal zone, not by study site; subtidal muds, Fe oxyhydroxide undergoing biogenic reductive dissolution, and peat-rich intertidal sediment had the highest values. These estimates were lowest in acid-generating, intertidal zone sediment; if valid, the estimates suggest that only one or two bacterial species predominate in these communities, and/or that Archeal species are important members of the microbial community in this sediment. All samples were dominated by bacterial FAMEs (median value >90%). Samples with the highest absolute abundance of eukaryotic FAMEs were biogenic Fe oxyhydroxides from shallow freshwater pools (fungi) and subtidal muds (diatoms). Eukaryotic FAMEs were practically absent from low-pH, sulfide-rich intertidal zone sediments. The relative abundance of general microbial functional groups such as aerobes/anaerobes and gram(+)/gram(-) was not estimated due to severe inconsistency among the results obtained using several metrics reported in the literature. Principal component analyses (PCAs) were performed to investigate the relationship among samples as separate functions of water, sediment, and FAMEs data. PCAs based on water chemistry and FAMEs data resulted in similar relations among samples, whereas the PCA based on sediment chemistry produced a very different sample arrangement. Specifically, the sediment parameter PCA grouped samples with high bulk trace metal concentration regardless of whether the metals were incorporated into secondary precipitates or primary sulfides. The water chemistry PCA and FAMEs PCA appear to be less prone to this type of artifact. Signature lipids in sulfide-rich sediments could indicate the presence of acid-tolerant and/or acidophilic members of the genus Thiobacillus or they could indicate the presence of SO4-reducing bacteria. The microbial community documented in subtidal and offshore sediments is rich in SRB and/or facultative anaerobes of the Cytophaga-Flavobacterium group; both could reasonably be expected in PWS coastal environments. The results of this study provide evidence for substantial feedback between local (meter to centimeter-scale) geochemical variations, and sediment microbial community composition, and show that microbial community signatures in the intertidal zone are significantly altered at sites where ARD drainage is present relative to sites where it is not, even if the sediment geochemistry indicates net accumulation of ARD-generated trace metals in the intertidal zone. ?? 2007 Elsevier Ltd. All rights reserved.

Bed structure (frond bleaching, density and biomass) of the red alga Gelidium corneum under different irradiance levels

NASA Astrophysics Data System (ADS)

Quintano, E.; Díez, I.; Muguerza, N.; Figueroa, F. L.; Gorostiaga, J. M.

2017-12-01

In recent decades a decline in the foundation species Gelidium corneum (Hudson) J. V. Lamouroux has been detected along the Basque coast (northern Spain). This decline has been attributed to several factors, but recent studies have found a relationship between high irradiance and the biochemical and physiological stress of G. corneum. Since physiological responses to changes in light occur well before variations in morphology, the present study seeks to use a size-class demographic approach to investigate whether shallow subtidal populations of G. corneum off the Basque coast show different frond bleaching, density and biomass under different irradiance conditions. The results revealed that the bleaching incidence and cover were positively related to irradiance, whereas biomass was negatively related. The effect of the irradiance level on frond density was found to vary with size-class, i.e. fronds up to 15 cm showed greater densities under high light conditions (126.6 to 262.2 W m- 2) whereas the number of larger fronds (> 20 cm) per unit area was lower. In conclusion, the results of the present study suggest that irradiance might be a key factor for controlling along-shore bleaching, frond density and biomass in G. corneum. Further research should be carried out on the physiology of this canopy species in relation to its bed structure and on the interaction of irradiance and other abiotic (nutrients, temperature, wave energy) and biotic factors (grazing pressure).

Toxicity of chromated copper arsenate (CCA)-treated wood to non-target marine fouling communities in Langstone Harbour, Portsmouth, UK.

PubMed

Brown, C J; Eaton, R A

2001-04-01

The effect of the anti-marine-borer timber preservative chromated copper arsenate (CCA) (a pressure impregnated solution of copper, chromium and arsenic compounds) on non-target marine fouling animals was investigated during a subtidal exposure trial. Panels of Scots pine treated to target retentions of 12, 24 and 48 kg CCA per m-3 of wood, plus untreated controls were submerged at a coastal site on the south coast of the UK for 6, 12 and 18 months. After each exposure period the fouling communities that formed on the surface of panels were assessed both qualitatively and quantitatively. Community structure was similar on panels treated to the three CCA loadings, but was significantly different from community structure on untreated panels. The total number of species (species richness) was similar on all panels, although the number of individual organisms attached to the surface of panels was significantly higher on CCA-treated panels than on untreated panels. k-dominance curves revealed that the difference in numbers of individuals between CCA-treated and untreated panels was caused by higher numbers of the dominant species (Elminius modestus, Hydroides ezoensis, and Electra pilosa) on CCA-treated panels. Other species were present in similar numbers on panels of all treatments. Results indicate that there are no detrimental toxic effects to epibiota caused by the presence of CCA preservative within the matrix of the wood at any of the treatment levels. Differences in community structure between CCA-treated and untreated panels may be due to enhanced larval settlement on CCA-treated timber by some species as a result of modifications to the surface properties of the timber by the CCA preservative.

Acute toxicity of cadmium to eight species of marine amphipod and isopod crustaceans from southern California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hong, J.S.; Reish, D.J.

1987-11-01

Amphipods and isopods are important components of the marine intertidal and subtidal fauna where they are found on or in the substrate or among spaces between larger, attached organisms. However, in spite of their abundance and importance, the use of these two endemic marine groups has been limited in comparison to decapods in marine toxicological research. The purpose of this study was to investigate the effect of a single metallic salt, CdCl/sub 2/, on six species of amphipods and two species of isopods under similar experimental conditions. Cadmium was selected as the toxicant in this comparative study since this metalmore » is an important constituent in municipal wastes discharged into southern California marine waters.« less

Climate and anthropogenic factors influencing an estuarine ecosystem from NW Iberia: new high resolution multiproxy analyses from San Simón Bay (Ría de Vigo)

NASA Astrophysics Data System (ADS)

Muñoz Sobrino, Castor; García-Moreiras, Iria; Castro, Yoel; Martínez Carreño, Natalia; de Blas, Esther; Fernandez Rodríguez, Carlos; Judd, Alan; García-Gil, Soledad

2014-06-01

Two sedimentary sequences (coastal and subtidal) were studied in San Simón Bay (Ría de Vigo), situated on the Atlantic coast of NW Iberia. The coastal record is a shallowing upward sequence which evidences a locally-developed low marsh, situated below the current beach, and dated at the second half of the 4th century. During the following decades this low marsh was progressively replaced by an alder swamp which formed on it. This suggests an apparent stabilisation or slow-down of the relative sea-level (RSL), in this site, at the beginning of the Dark Ages (DA). The subtidal sequence studied reflects the main changes in the landscape, the hydrological conditions, climate and RSL affecting this part of NW Iberia during the last 1250 years. Evidence of changing dinocysts content in the sediment reveals that two centennial or decadal-scale episodes existed of shelf marine waters more intensely penetrating inside the bay: between the 15th-18th centuries and at ca 1800-1930 AD. Besides, we related different proxies with the occurrence of four main climatic stages, namely the previously described Dark Ages (DA, ca 350-750 AD), the Mediaeval Climatic Anomaly (MCA, ca 750-1100 AD) and the Little Ice Age (LIA. ca 1500-1930 AD); in addition we propose a regional MCA/LIA transition (ca 1100-1500 AD) that it has not been previously described. Our environmental characterization indicates a persistent North Atlantic Oscillation (NAO) negative mode domain in Ría de Vigo during the MCA, but this became weaker during the LIA and, probably, also during the earlier DA. NAO mode become more irregular during the MCA/LIA transition, generally persisting in dominant negative mode except for a phase of minor upwelling intensification, at ca 1150-1350 AD, which mainly affected the external parts of the ria. We postulate that an almost simultaneous phase (ca 1100-1350 AD) of stronger continental contribution in the sediments may be related to increasing storm intensities, probably linked to a reinforcement of the Easter Atlantic (EA) pattern; and also that the intertidal/supratidal ecosystems inside San Simón Bay may have extended further in the past, at least towards the end of the 5th century, and between ca 1050-1350 AD and ca 1450-1750 AD. A number of local historical references are consistent with our palaeoecological data and so support the chronology proposed as well as many of the environmental changes reconstructed. This good agreement will help in the interpretation of other analogous sequences extending back in time.

Folly Beach, South Carolina. Survey Report on Beach Erosion Control and Hurricane Protection. Appendixes.

DTIC Science & Technology

1979-08-01

horseshoe crabs, sand dollars and numerous clams and gastropod mollusks i,, the beach subtidal areas. In addition, several species of fish are conyionly...bacteria and protozoa. Most benthic animals such as crustaceans, bivalve and gastropod mollusks, and burrowing and tube-dwelling polychaete worms are...due to the continual ut :ftil tidal fJ a. . , ted sediment shifting. Inlet inhabitants onsist nos ,y 1 1.., itipods, and polychaetes which are adapted

In-Water Treatment of Biofouling in Internal Systems: Field Validation of Quaternary Ammonium Compound (QAC) Chemical Treatment Protocols

DTIC Science & Technology

2013-06-01

accumulate and shelter sessile and mobile marine species. Fouling in sea chests and sea water pipework is also an operational issue for marine engineers ...pipework is also an operational issue for marine engineers , as it restricts water flow to essential vessel systems and may enhance biocorrosion [18, 19...subtidal marine communities worldwide and are considered as key species and important habitat engineers in benthic communities [30]. They possess high

Subtidal Dynamics of the Vietnamese Shelf: Ship- and Glider-Based Observations of Hydrographic Structure and Circulation

DTIC Science & Technology

2013-09-30

glider endurance line off Vietnam, repeating NAGA sections that have not been occupied since the early 1960s, operated by Vietnamese scientists...1959-1961 NAGA expedition, using AUV gliders. We propose train the Vietnamese scientists by inviting and supporting them to visit OSU for a 1-2...biogeochemistry of the Vietnamese East Sea, including changes since the NAGA Expeditions In addition to planning, we have also been successful in bringing

Subtidal Dynamics of the Vietnamese Shelf: Ship- and Glider-Based Observations of Hydrographic Structure and Circulation

DTIC Science & Technology

2012-09-30

repeating NAGA sections that have not been occupied since the early 1960s, operated by Vietnamese scientists trained at OSU. We propose to conduct...endurance line off Vietnam in collaboration with Vietnamese scientists. Specifically, we proposed to recreate the 1959-1961 NAGA expedition, using AUV...including changes since the NAGA Expeditions In addition to planning, we have also been successful in bringing the RV Revelle to Da Nang, Vietnam from

A multi-decade time series of kelp forest community structure at San Nicolas Island, California

USGS Publications Warehouse

Lafferty, Kevin D.; Kenner, Michael C.; Estes, James A.; Tinker, M. Tim; Bodkin, James L.; Cowen, Robert K.; Harrold, Christopher; Novak, Mark; Rassweiler, Andrew; Reed, Daniel C.

2013-01-01

San Nicolas Island is surrounded by broad areas of shallow subtidal habitat, characterized by dynamic kelp forest communities that undergo dramatic and abrupt shifts in community composition. Although these reefs are fished, the physical isolation of the island means that they receive less impact from human activities than most reefs in Southern California, making San Nicolas an ideal place to evaluate alternative theories about the dynamics of these communities. Here we present monitoring data from seven sampling stations surrounding the island, including data on fish, invertebrate, and algal abundance. These data are unusual among subtidal monitoring data sets in that they combine relatively frequent sampling (twice per year) with an exceptionally long time series (since 1980). Other outstanding qualities of the data set are the high taxonomic resolution captured and the monitoring of permanent quadrats and swaths where the history of the community structure at specific locations has been recorded through time. Finally, the data span a period that includes two of the strongest ENSO events on record, a major shift in the Pacific decadal oscillation, and the reintroduction of sea otters to the island in 1987 after at least 150 years of absence. These events provide opportunities to evaluate the effects of bottom-up forcing, top-down control, and physical disturbance on shallow rocky reef communities.

Limits to the thermal tolerance of corals adapted to a highly fluctuating, naturally extreme temperature environment

PubMed Central

Schoepf, Verena; Stat, Michael; Falter, James L.; McCulloch, Malcolm T.

2015-01-01

Naturally extreme temperature environments can provide important insights into the processes underlying coral thermal tolerance. We determined the bleaching resistance of Acropora aspera and Dipsastraea sp. from both intertidal and subtidal environments of the naturally extreme Kimberley region in northwest Australia. Here tides of up to 10 m can cause aerial exposure of corals and temperatures as high as 37 °C that fluctuate daily by up to 7 °C. Control corals were maintained at ambient nearshore temperatures which varied diurnally by 4-5 °C, while treatment corals were exposed to similar diurnal variations and heat stress corresponding to ~20 degree heating days. All corals hosted Symbiodinium clade C independent of treatment or origin. Detailed physiological measurements showed that these corals were nevertheless highly sensitive to daily average temperatures exceeding their maximum monthly mean of ~31 °C by 1 °C for only a few days. Generally, Acropora was much more susceptible to bleaching than Dipsastraea and experienced up to 75% mortality, whereas all Dipsastraea survived. Furthermore, subtidal corals, which originated from a more thermally stable environment compared to intertidal corals, were more susceptible to bleaching. This demonstrates that while highly fluctuating temperatures enhance coral resilience to thermal stress, they do not provide immunity to extreme heat stress events. PMID:26627576

Diatom assemblages as guides to flow conditions during the 2004 Indian Ocean tsunami at Phra Thong Island, Thailand

NASA Astrophysics Data System (ADS)

Sawai, Y.; Jankaew, K.; Martin, M. E.; Choowong, M.; Charoentitirat, T.; Prendergast, A.

2008-12-01

Diatom assemblages in the 2004 tsunami deposits of Phra Thong Island, Thailand represent flow conditions during the tsunami. The tsunami deposit consists of single or multiple graded beds. Diatom assemblages in the lowermost part of the deposit predominantly comprise beach and subtidal species. In the middle part of the deposit, the assemblages are dominated by marine plankton with increasing finer fractions. A mixed assemblage of freshwater, brackish, and marine species occupies the uppermost part of the deposit. Changes in flow conditions during the tsunami can explain these diatom assemblage variations. During fast current velocities, medium sand is deposited; only beach and subtidal diatoms that live attached to the sand can be incorporated into the tsunami deposit under these flow conditions. It is difficult for diatoms in suspension to settle out under fast current velocities. With decreasing current velocities, marine plankton can settle out of the water column .Finally, during the suspension stage (calm currents) between tsunami waves, the entrained freshwater, brackish, and marine species settle out with mud and plant trash. Fewer broken valves in the lowermost part of the deposit is probably a results of rapid entrainment, whilst selective breakage of marine plankton (Thalassionema nitzschioides, and Thalassiosira and Coscinodiscus spp.) in the middle part of the deposit probably results from abrasion by turbulent current before their deposition.

Limits to the thermal tolerance of corals adapted to a highly fluctuating, naturally extreme temperature environment.

PubMed

Schoepf, Verena; Stat, Michael; Falter, James L; McCulloch, Malcolm T

2015-12-02

Naturally extreme temperature environments can provide important insights into the processes underlying coral thermal tolerance. We determined the bleaching resistance of Acropora aspera and Dipsastraea sp. from both intertidal and subtidal environments of the naturally extreme Kimberley region in northwest Australia. Here tides of up to 10 m can cause aerial exposure of corals and temperatures as high as 37 °C that fluctuate daily by up to 7 °C. Control corals were maintained at ambient nearshore temperatures which varied diurnally by 4-5 °C, while treatment corals were exposed to similar diurnal variations and heat stress corresponding to ~20 degree heating days. All corals hosted Symbiodinium clade C independent of treatment or origin. Detailed physiological measurements showed that these corals were nevertheless highly sensitive to daily average temperatures exceeding their maximum monthly mean of ~31 °C by 1 °C for only a few days. Generally, Acropora was much more susceptible to bleaching than Dipsastraea and experienced up to 75% mortality, whereas all Dipsastraea survived. Furthermore, subtidal corals, which originated from a more thermally stable environment compared to intertidal corals, were more susceptible to bleaching. This demonstrates that while highly fluctuating temperatures enhance coral resilience to thermal stress, they do not provide immunity to extreme heat stress events.

Cyclic transgressive and regressive sequences, Paleocene Suite, Sirte basin, Libya

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abushagur, S.A.

1986-05-01

The Farrud lithofacies represent the main reservoir rock of the Ghani oil field and Western Concession Eleven of the Sirte basin, Libya. Eight microfacies are recognized in the Farrud lithofacies in the Ghani field area: (1) bryozoan-bioclastic (shallow, warm, normal marine shelf deposits); (2) micrite (suggesting quiet, low-energy conditions such as may have existed in a well-protected lagoon); (3) dasycladacean (very shallow, normal marine environment); (4) bioclastic (very shallow, normal marine environment with moderate to vigorous energy); (5) mgal (very shallow, normal marine environment in a shelf lagoon); (6) pelletal-skeletal (deposition within slightly agitated waters of a sheltered lagoon withmore » restricted circulation); (7) dolomicrite (fenestrate structures indicating a high intertidal environment of deposition); and (8) anhydrite (supratidal environment). The Paleocene suite of the Farrud lithofacies generally shows a prograding, regressive sequence of three facies: (1) supratidal facies, characterized by nonfossiliferous anhydrite, dolomite, and dolomitic pelletal carbonate mudstone; (2) intertidal to very shallow subtidal facies, characterized by fossiliferous, pelletal, carbonate mudstone and skeletal calcarenite; and (3) subtidal facies, characterized by a skeletal, pelletal, carbonate mudstone. Source rocks were primarily organic-rich shales overlying the Farrud reservoir rock. Porosity and permeability were developed in part by such processes as dolomitization, leaching, and fracturing in the two progradational, regressive carbonate facies. Hydrocarbons were trapped by a supratidal, anhydrite cap rock.« less

HSP70 production patterns in coastal and estuarine organisms facing increasing temperatures

NASA Astrophysics Data System (ADS)

Madeira, D.; Narciso, L.; Cabral, H. N.; Vinagre, C.; Diniz, M. S.

2012-10-01

Heat shock proteins are important components in the cellular defense against proteotoxic stress. This work aimed to reveal HSP70 (hsc70 plus hsp70) expression patterns in several marine species (fish, crabs and shrimps) within a community along a temperature gradient and at the upper thermal limit. The organisms were collected in the Tagus estuary and adjacent shore (in Cabo Raso), Portugal. Exposure trials were performed using the critical thermal maximum (CTMax) method in order to recreate a stress gradient of ecological relevance. Protein analysis was performed using an enzyme linked immunosorbent assay (ELISA). Organisms within each community (estuary, coast; subtidal, intertidal, supratidal) responded in several different ways: no change in HSP70 levels, an increase in HSP70 levels, or increases and decreases in HSP70 levels. These patterns of response occurred independently of taxa, CTMax and habitat type. Magnitude of expression relates to the habitat's thermal conditions. Species from highly variable and hot habitats i.e. intertidal/supratidal zone, and living in greater shore heights produce higher amounts of HSP70. Demersal and subtidal species inhabit colder and more stable waters thus they seem to have a slower heat shock response. No clear pattern was observed for species of the same group (fish, crabs and shrimps) or congeneric species. HSP70 expression showed high intraspecific variability potentially due to genetic traits, environmental traits and condition status.

Isotopic determination of the trophic ecology of a ubiquitous key species - The crab Liocarcinus depurator (Brachyura: Portunidae)

NASA Astrophysics Data System (ADS)

Careddu, Giulio; Calizza, Edoardo; Costantini, Maria Letizia; Rossi, Loreto

2017-05-01

Knowledge of the trophic ecology of predators is key to understanding how they affect food web structure and ecosystem functioning. The harbour crab Liocarcinus depurator (L.) (Brachyura: Portunidae) is one of the most abundant decapod species in soft-bottom areas of the Mediterranean Sea and northeast Atlantic Ocean. It is both a common prey and predator of commercial and non-commercial marine species and its predation pressure appears to have little effect on the subtidal community assemblage. However, there are few studies of its diet and little is known about its role in mediating energy flows in marine ecosystems. In this study, carbon (δ13C) and nitrogen (δ15N) stable isotope analysis (SIA) and Bayesian analytical tools were used to characterise the trophic niche of L. depurator and to quantify the most important prey supporting this species under various environmental conditions. Specimens of L. depurator, their potential prey and basal resources were collected from two different subtidal areas of the Gulf of Gaeta, one affected by human activities (north side) and the other seasonally influenced by freshwater inputs originating from the River Garigliano (south side). While there were differences between the two sampling areas in terms of the abundance and δ15N and δ13C values of the macrobenthic prey community, no differences in the δ15N values and trophic position of L. depurator were observed. Specifically, Bayesian mixing models showed Polychaeta Errantia as the main source of crab diets in both areas. The observed differences in the δ13C values and the analysis of trophic pathways also indicate that the terrestrial organic matter originating from the discharge of the River Garigliano was integrated along the food web up to L. depurator. Although this species is usually considered an opportunistic feeder, it appears to be highly selective and its trophic habits did not influence food web topology, which in contrast was found to be strongly influenced by River Garigliano discharge.

Modern Estuarine Sedimentation in Suisun Bay, California

NASA Astrophysics Data System (ADS)

Chin, J. L.; Orzech, K.; Anima, R. J.; Jaffe, B.

2002-12-01

Suisun Bay is the northeasternmost part of San Francisco Bay (California), the largest estuary on the Pacific Coast of the United States. Suisun Bay's geographic and morphologic position are unique in that it occupies the head of the estuary and is subject to the maximum freshwater inflow and sediment input of the Sacramento-San Joaquin Rivers, whose drainage basin covers 40% of the land area of California. Suisun Bay consists of two smaller subembayments, Grizzly and Honker Bays. Gravity cores obtained in 1990-1991 and 1999 were analyzed to delineate depositional environments and sedimentation patterns in Suisun Bay. Major depositional environments include: tidal channel (subtidal), tidal channel banks (subtidal), tidal flat (intertidal to subtidal), and bay mouth (subtidal). The tidal channel environment includes both large and small channels in Suisun Bay as well as the tidal sloughs Suisun and Montezuma Sloughs. The coarsest sediment, usually sand or muddy sand, characterize this environment and water depths range from 2 to 11 m. Thin (1-2 mm) and discontinuous silt and clay laminae are common. Suisun and Montezuma Sloughs are the exception to this pattern in that they consist of massive, intensely bioturbated muds. Tidal channel banks (both "cut" and "accretionary" channel margins), particularly accretionary banks, are characterized by low-to-moderate bioturbation and sandy mud to muddy sand lithology. Typically alternating sand and mud beds (1-6 cm thick) are present; both types of beds consist of 1mm to 1cm thick subhorizontal to inclined laminae. Laminae composed of organic detritus are also present. Where this environment is transitional with the tidal flat environment water depths range from 2-8 m. Tidal flat environments include the "sand" shoals present on bathymetry charts, and are typically a bioturbated muddy sand to sandy mud. Sand and mud beds, 1-3 cm thick, are often characterized by very fine 1-2 mm thick silt and mud laminae. Water depths range from 2 to 4.5 m where these laminated tidal flat sediments occur. Bay mouth environments occur only in the distal portions of Grizzly and Honker Bays, subembayments of Suisun Bay proper. This environment is transitional with both tidal channel bank and tidal flat environments and shares characteristics with each. Massive to interbedded mud is the most common lithology, although sandy mud to muddy sand also occurs. Centimeters thick sand and mud beds typically alternate vertically. Bioturbation is low to moderate. Water depths over this environment range from 2 to 3 m. Depositional environments present in Suisun Bay are the result of a full range of tidal and fluvial processes as shown by the lithologies and alternating sediment stratigraphic patterns observed in cores. Very thin beds and intense bioturbation evidence intervals of very slow to negligible sedimentation. Rapid deposition and/or resuspension are evidenced by thick sediment intervals and by laminae that are continuous and apparently unbioturbated. Very fine scale sedimentation that may represent individual ebb and flood events as well as longer term seasonal sedimentation patterns are also present. An additional observation is that almost a quarter of the gravity cores reveal that modern estuarine deposits overlie an erosional surface that separate them from an organic-rich mud. This organic-rich mud, in one core to date, has been radiocarbon dated at roughly 4500 yrs. B.P. (J.Chin and K. Orzech, 2002, unpublished data). The organic-rich mud is interpreted as a tidal marsh deposit that pre-dates the present tidal marshes occurring in Suisun Bay.

Hydrography and bottom boundary layer dynamics: Influence on inner shelf sediment mobility, Long Bay, North Carolina

USGS Publications Warehouse

Davis, L.A.; Leonard, L.A.; Snedden, G.A.

2008-01-01

This study examined the hydrography and bottom boundary-layer dynamics of two typical storm events affecting coastal North Carolina (NC); a hurricane and the passages of two small consecutive extratropical storms during November 2005. Two upward-looking 1200-kHz Acoustic Doppler Current Profilers (ADCP) were deployed on the inner shelf in northern Long Bay, NC at water depths of less than 15 m. Both instruments profiled the overlying water column in 0.35 in bins beginning at a height of 1.35 in above the bottom (mab). Simultaneous measurements of wind speed and direction, wave and current parameters, and acoustic backscatter were coupled with output from a bottom boundary layer (bbl) model to describe the hydrography and boundary layer conditions during each event. The bbl model also was used to quantify sediment transport in the boundary layer during each storm. Both study sites exhibited similar temporal variations in wave and current magnitude, however, wave heights during the November event were higher than waves associated with the hurricane. Near-bottom mean and subtidal currents, however, were of greater magnitude during the hurricane. Peak depth-integrated suspended sediment transport during the November event exceeded transport associated with the hurricane by 25-70%. Substantial spatial variations in sediment transport existed throughout both events. During both events, along-shelf sediment transport exceeded across-shelf transport and was related to the magnitude and direction of subtidal currents. Given the variations in sediment type across the bay, complex shoreline configuration, and local bathymetry, the sediment transport rates reported here are very site specific. However, the general hydrography associated with the two storms is representative of conditions across northern Long Bay. Since the beaches in the study area undergo frequent renourishment to counter the effects of beach erosion, the results of this study also are relevant to coastal management decision-making. Specifically, these issues include 1) identification of municipalities that should share the cost for renourishment given the likelihood for significant along-shelf sand movement and 2) appropriate timing of sand placement with respect to local climatology and sea-turtle nesting restrictions.

Comparing efficacy of different taxonomic resolutions and surrogates in detecting changes in soft bottom assemblages due to coastal defence structures.

PubMed

Bertasi, Fabio; Colangelo, Marina Antonia; Colosio, Francesco; Gregorio, Gianni; Abbiati, Marco; Ceccherelli, Victor Ugo

2009-05-01

Sandy shores on the West coast of the North Adriatic Sea are extensively protected by different types of defence structures to prevent coastal erosion. Coastal defence schemes modify the hydrodynamic regime, the sediment structure and composition thus affecting the benthic assemblages. This study examines the effectiveness in detecting changes in soft bottom assemblages caused by coastal defence structures by using different levels of taxonomic resolution, polychaetes and/or bivalves as surrogates and different data transformations. A synoptic analyses of three datasets of subtidal benthic macrofauna used in studies aimed at assessing the impact of breakwaters along the North Adriatic coast has been done. Analyses of similarities and correlations between distance matrices were done using matrices with different levels of taxonomic resolution, and with polychaetes or bivalves data alone. Lentidium mediterraneum was the most abundant species in all datasets. Its abundance was not consistently related to the presence of defence structures. Moreover, distribution patterns of L. mediterraneum were masking the structure of the whole macrofaunal assemblages. Removal of L. mediterraneum from the datasets allowed the detection of changes in benthic assemblages due to coastal defences. Analyses on different levels of taxonomic resolution showed that the level of family maintained sufficient information to detect the impacts of coastal defence structures on benthic assemblages. Moreover, the outcomes depended on the transformation used. Patterns of distribution of bivalves, used as surrogates, showed low correlations with the patterns of the total macrofaunal species assemblages. Patterns of polychaetes, if identified to the species or genus level showed higher correlations with the whole dataset. However, the identification of polychaetes to species and genus level is as costly as the identification of all macrobenthic taxa at family level. This study provided additional evidences that taxonomic sufficiency is a useful tool in environmental monitoring, also in investigations on the impacts of coastal defence structures on subtidal macrofauna. The use of coarser taxonomic level, being time-efficient, would allow improving sampling designs of monitoring programs by increasing replication in space and time and by allowing long term monitoring studies.

Faunal community use of enhanced and natural oyster reefs in Delaware Bay: A field study and classroom inquiry

NASA Astrophysics Data System (ADS)

Paterno, Jenny L.

In addition to its value as a fisheries resource, the eastern oyster Crassostrea virginica, is a reef building, cornerstone species that provides ecosystem services to the environment. Oysters provide habitat for associated resident and transient species. With widespread declines in oyster populations, restoration efforts have focused on improving oyster stocks and enhancing the ecosystem services they provide. Community-based oyster restoration programs engage the public and local community in planning, construction and/or monitoring of restoration projects. Since 2007, a K-12 student centered community-based restoration venture, Project PORTS, Promoting Oyster Restoration Through Schools, has been working to educate students, promote stewardship values, and enhance oyster habitat in the Delaware Bay. The overarching goals of the present study were to (1) assess fish and macroinvertebrate utilization on the Project PORTS community-created, subtidal, low-relief oyster restoration area in the Delaware Bay, and (2) convert the data collected into a STEM (Science, Technology, Engineering and Mathematics) activity that can be implemented in the classroom. I examined six subtidal natural oyster reefs of varying oyster densities and one community-based restoration reef as habitat for fishes and invertebrates. Sampling methods on these low-relief reefs consisted of otter trawl tows and benthic habitat tray collections. Results revealed that the enhancement area supported a diverse faunal community consistent with nearby, natural oyster habitats. Data collected during the field study were then transformed into an educational lesson plan, "One Fish, Two Fish-Assessing Habitat Value of Restored Oyster Reefs", that fulfilled national and state (NJ) curriculum standards. The lesson was piloted in a middle school classroom and student learning was evaluated through summative assessments pre and post-participation in the activity. Results of the assessments indicated that students made strong gains in knowledge of oyster ecology and improved analytical skills by graphing data. This dual interest study demonstrated that a novel education program with a local, real-world connection positively enhanced crucial estuarine habitat while expanding STEM knowledge and skills of participating students.

New species and new records of bryozoans from shallow waters of Madeira Island.

PubMed

Souto, Javier; Kaufmann, Manfred J; Canning-Clode, João

2015-03-03

Two new species of bryozoans encrusting subtidal rocks are described from the shallow waters of Madeira Island. We describe one cyclostome, Favosipora purpurea sp. nov., which represents the first record of this genus in the Atlantic Ocean, and one cheilostome, Rhynchozoon papuliferum sp. nov. In addition, one species, Beania maxilladentata, is recorded for the first time outside of Rio de Janeiro, Brazil. Six other species previously recorded in Madeira are redescribed to provide new data and SEM images.

Ecological Effects of Rubble Weir Jetty Construction at Murrells Inlet, South Carolina. Volume 2. Changes in Macrobenthic Communities of Sandy Beach and Nearshore ENvironments.

DTIC Science & Technology

1984-06-01

species were not commonly observed, and oligochaetes and nematodes were abundant in the area. Rany of these differences were attributed to normal...1977-78 (Table 3). Subtidally, amphipods and pelecypods were most abundant in 1982, while oligochaetes and nematodes largely dominated the intertidal...generally restricted to that level and the highest intertidal level (Table 10). Nematodes were also abundant in the upper intertidal zone, with greatest

Evaluation of Potential for Monitored Natural Attenuation of Perchlorate in Groundwater (Indian Head)

DTIC Science & Technology

2010-07-01

United States is through consumption of food (USFDA, 2007). This is a concern because high levels of perchlorate interfere with iodide uptake by the...from more that 50 mg/L to below detection using lactate as a food source; (and) the pH of the aquifer must be buffered to achieve optimal perchlorate...defined by a covering of Nelumbo lutea (American lotus ) which are visible beyond the Subtidal Channel in the photograph Figure 3-14. The main channel

Habitat creation and biodiversity maintenance in mangrove forests: teredinid bivalves as ecosystem engineers

PubMed Central

Michie, Laura; Taylor, Ben W.

2014-01-01

Substantial amounts of dead wood in the intertidal zone of mature mangrove forests are tunnelled by teredinid bivalves. When the tunnels are exposed, animals are able to use tunnels as refuges. In this study, the effect of teredinid tunnelling upon mangrove forest faunal diversity was investigated. Mangrove forests exposed to long emersion times had fewer teredinid tunnels in wood and wood not containing teredinid tunnels had very few species and abundance of animals. However, with a greater cross-sectional percentage surface area of teredinid tunnels, the numbers of species and abundance of animals was significantly higher. Temperatures within teredinid-attacked wood were significantly cooler compared with air temperatures, and animal abundance was greater in wood with cooler temperatures. Animals inside the tunnels within the wood may avoid desiccation by escaping the higher temperatures. Animals co-existing in teredinid tunnelled wood ranged from animals found in terrestrial ecosystems including centipedes, crickets and spiders, and animals found in subtidal marine ecosystems such as fish, octopods and polychaetes. There was also evidence of breeding within teredinid-attacked wood, as many juvenile individuals were found, and they may also benefit from the cooler wood temperatures. Teredinid tunnelled wood is a key low-tide refuge for cryptic animals, which would otherwise be exposed to fishes and birds, and higher external temperatures. This study provides evidence that teredinids are ecosystem engineers and also provides an example of a mechanism whereby mangrove forests support intertidal biodiversity and nurseries through the wood-boring activity of teredinids. PMID:25276505

The environmental distribution of late proterozoic organisms

NASA Technical Reports Server (NTRS)

Knoll, A. H.

1991-01-01

Along present day coast lines, the environmental distributions of prokaryotic and protistan populations are often sharply delimited. Realized habitat ranges are generally narrower than those circumscribed by physiological tolerances, suggesting the importance of organism-organism interactions in the determination of population distributions. Microfossil populations preserved in silicified carbonates, dolomites, and shales of the 700-800 Ma old Akademikerbreen Group, Svalbard, and elsewhere indicate that the environmental distributions were defined equally clearly during the Proterozoic Eon. The Draken Conglomerate Formation is a tidal flat/lagoonal complex in which we have distinguished five principle biofacies containing a total of 42 taxa. Supratidal to subtidal gradients include the increasing abundance and diversity of both mat dweller microbenthos and allochthonous (principally planktonic) organisms, as well as a taphonomically important pattern of decreasing sheath thickness among mat builder microorganisms. The seaward barriers of Akademikerbreen lagoons were oolitic shoals, and these contain about a dozen endolithic and epilithic species not observed elsewhere in the group. Subtidal environments below fair weather wave base are represented by mudstones of the Svanbergfjellet Formation. These contain abundant and diverse cyanobacteria-like fossils generally similar to but specifically different from those found in tidal flat sediments, as well as diverse unicellular protists (some of impressive morphological complexity) and at least half a dozen cellularly preserved metaphyte populations. In all, more than 80 species are distributed among Akademikerbreen lithologies. Fossil assemblages from Svalbard and elsewhere illustrate the potential for a much finer paleoecological, biostratigraphic, and, hence, evolutionary resolution of the early fossil record.

Does Encope emarginata (Echinodermata: Echinoidea) affect spatial variation patterns of estuarine subtidal meiofauna and microphytobenthos?

NASA Astrophysics Data System (ADS)

Brustolin, Marco C.; Thomas, Micheli C.; Mafra, Luiz L.; Lana, Paulo da Cunha

2014-08-01

Foraging macrofauna, such as the sand dollar Encope emarginata, can modify sediment properties and affect spatial distribution patterns of microphytobenthos and meiobenthos at different spatial scales. We adopted a spatial hierarchical approach composed of five spatial levels (km, 100 s m, 10 s m, 1 s m and cm) to describe variation patterns of microphytobenthos, meiobenthos and sediment variables in shallow subtidal regions in the subtropical Paranaguá Bay (Southern Brazil) with live E. emarginata (LE), dead E. emarginata (only skeletons - (DE), and no E. emarginata (WE). The overall structure of microphytobenthos and meiofauna was always less variable at WE and much of variation at the scale of 100 s m was related to variability within LE and DE, due to foraging activities or to the presence of shell hashes. Likewise, increased variability in chlorophyll-a and phaeopigment contents was observed among locations within LE, although textural parameters of sediment varied mainly at smaller scales. Variations within LE were related to changes on the amount and quality of food as a function of sediment heterogeneity induced by the foraging behavior of sand dollars. We provide strong evidence that top-down effects related to the occurrence of E. emarginata act in synergy with bottom-up structuring related to hydrodynamic processes in determining overall benthic spatial variability. Conversely, species richness is mainly influenced by environmental heterogeneity at small spatial scales (centimeters to meters), which creates a mosaic of microhabitats.

Cyclicity in Silurian island-arc carbonates, Alexander terrane, Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kittredge, L.E.; Soja, C.M.

1993-03-01

Silurian carbonates from Alaska (Alexander terrane) record the evolution of a submarine platform during waning volcanism in an island arc. A detailed stratigraphic analysis of a 47 meter-thick sequence revealed the existence of cyclically repeated limestones: coral-stromatoporoid wackestones alternate with oncoid packstones and bioturbated, silty lime mudstones. The coral-stromatoporoid deposits are characterized by a low-diversity assemblage of dendroid corals, massive stromatoporoids, Atrypoidea brachiopods, and rare occurrences of biostromes associated with Solenopora, high-spired gastropods, and crinoids. Oncoids typically are 2-6 mm in diameter and form massive, meter-thick units. Coated grains are symmetrically developed, have a shell or algal nucleus, and aremore » also a minor component of coral-stromatoporoid beds. These lithologic units form seven, shallowing-upwards cycles (parasequences) that range in thickness from 3-9 meters. Coral-stomatoporoid wackestones form the base of each cycle and grade upwards into oncoid packstones with silty, lime mudstones at the top. This succession of lithofacies within each cycle reflects an increase in energy levels from relatively deeper water environments to relatively shallower ones. The lack of abrasion in the corals and stromatoporoids suggests predominantly quiet-water conditions in shallow subtidal areas affected by periodic turbulence. Comparison with correlative sections in Alaska and lack of correspondence with global sea level curves suggest that the primary cause of cyclicity was tectonic perturbations with secondary eustatic effects. Cyclic deposition in peri/subtidal sites was terminated by rapid drowning of the carbonate platform during late Silurian orogenesis.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Page, D.S.; Boehm, P.D.; Douglas, G.S.

Advanced hydrocarbon fingerprinting methods and improved analytical methods make possible the quantitative discrimination of the multiple sources of hydrocarbons in the benthic sediments of Prince William Sound (PWS) and the Gulf of Alaska. These methods measure an extensive range of polycyclic aromatic hydrocarbons (PAH) at detection levels that are as much as two orders of magnitude lower than those obtained by standard Environmental Protection Agency methods. Nineteen hundred thirty six subtidal sediment samples collected in the sound and the eastern Gulf of Alaska in 1989, 1990, and 1991 were analyzed. Fingerprint analyses of gas chromatography-mass spectrometry data reveal a naturalmore » background of petrogenic and biogenic PAH. Exxon Valdez crude, its weathering products, and diesel fuel refined from Alaska North Slope crude are readily distinguished from the natural seep petroleum background and from each other because of their distinctive PAH distributions. Mixing models were developed to calculate the PAH contributions from each source to each sediment sample. These calculations show that most of the seafloor in PWS contains no detectable hydrocarbons from the Exxon Valdez spill, although elevated concentrations of PAH from seep sources are widespread. In those areas where they were detected, spill hydrocarbons were generally a small increment to the natural petroleum hydrocarbon background. Low levels of Exxon Valdez crude residue were present in 1989 and again in 1990 in nearshore subtidal sediments off some shorelines that had been heavily oiled. By 1991 these crude residues were heavily degraded and even more sporadically distributed. 58 refs., 18 figs., 5 tabs.« less

Heterogeneous distribution in sediments and dispersal in waters of Alexandrium minutum in a semi-enclosed coastal ecosystem.

PubMed

Klouch, Z K; Caradec, F; Plus, M; Hernández-Fariñas, T; Pineau-Guillou, L; Chapelle, A; Schmitt, S; Quéré, J; Guillou, L; Siano, R

2016-12-01

Within the framework of research aimed at using genetic methods to evaluate harmful species distribution and their impact on coastal ecosystems, a portion of the ITS1rDNA of Alexandrium minutum was amplified by real-time PCR from DNA extracts of superficial (1-3cm) sediments of 30 subtidal and intertidal stations of the Bay of Brest (Brittany, France), during the winters of 2013 and 2015. Cell germinations and rDNA amplifications of A. minutum were obtained for sediments of all sampled stations, demonstrating that the whole bay is currently contaminated by this toxic species. Coherent estimations of ITS1rDNA copy numbers were obtained for the two sampling cruises, supporting the hypothesis of regular accumulation of A. minutum resting stages in the south-eastern, more confined embayments of the study area, where fine-muddy sediments are also more abundant. Higher ITS1rDNA copy numbers were detected in sediments of areas where blooms have been seasonally detected since 2012. This result suggests that specific genetic material estimations in superficial sediments of the bay may be a proxy of the cyst banks of A. minutum. The simulation of particle trajectory analyses by a Lagrangian physical model showed that blooms occurring in the south-eastern part of the bay are disconnected from those of the north-eastern zone. The heterogeneous distribution of A. minutum inferred from both water and sediment suggests the existence of potential barriers for the dispersal of this species in the Bay of Brest and encourages finer analyses at the population level for this species within semi-enclosed coastal ecosystems. Copyright © 2016 Elsevier B.V. All rights reserved.

Decadal to Millennial Sedimentation Patterns of the Hudson River Estuary

NASA Astrophysics Data System (ADS)

Jones, M.; McHugh, C. M.; Burckle, L.; Pekar, S.; Pereira, G.; Ryan, W. B.; Bell, R.; Carbotte, S.

2002-12-01

The Hudson River Estuary (HRE) is adjacent to large metropolitan areas including New York City. Understanding the variable energy conditions for transporting sediments is key to deal with environmental pollution such as the controversial burial and dredging of PCB's in the HRE. We studied sediment transport in the HRE by examining more than 150 cores and grab samples interpreted within the framework of acoustic images. The HRE sedimentary environments were defined based on quantitative estimates of grain size, sedimentary structures, bioturbation, and sedimentation rates and were divided into: channel, channel banks, subtidal flats, tributaries, and islands. Diatom assemblages were used to determine the extent of salt-water intrusion and sediment reworking in the estuary. Along a longitudinal profile, the estuary can be subdivided into: (1) sandy inner fluvial (furthest upstream), (2) muddy central portions, and (3) sandy outer marine. We classified sedimentary facies for the central and fluvial parts of the system (1 and 2). The HRE basin is nearly filled with sediment and tidal energy is focused within the channel and its banks. In the central basin where the estuary is wide (up to 4 km), flood currents are more energetic along the eastern channel bank and the ebb currents lead to minor sediment deposition on the western bank, but only where the system is out of equilibrium with its sediment load. The energy of the tides is accentuated along narrow segments of the estuary that are locally constrained by gorges of the Hudson Valley Highlands leading to erosion and the trapping of sediments. Beyond the banks of the channel, the subtidal flats that were filled with sediment by 0.5 to 3ka, are tranquil environments where the sediment is homogenized by bioturbation and reworked by waves as the estuary shallowed. Occasional high-energy events, (possibly flood-related) eroded the subtidal flats sediment as shown by rare rip-up clasts found in the cores. The inner fluvial part of the estuary is filling with sediments above sea-level forming islands. Here, the energy of tidal currents is strong as evidenced by the sand-mud rhythmic alternations of the sediments. Tributaries contribute a generally low sediment budget, but only on a seasonal basis and the fluvial energy is not strong enough to transport the gravel-size components that remain near the mouths of the tributaries forming localized deltas. The fluvial sands, form waves that migrate along the channel floor, but this coarser-grained bedload is rarely transported south of Kingston, New York, resulting in a muddy estuarine bottom further downstream. Results show that tidal energy is a dominant force in the transport and deposition of HRE sediments and that only fine-grained sediments are transported throughout most of the studied areas. Because the HRE basin is nearly filled, most sediment bypasses the system with only localized areas of sediment trapping where the estuary is out of equilibrium with its sediment load, and in the estuarine turbidity maxima, an area previously shown to contain high sediment concentrations.

Chemistry and Environments of Dolomitization —A Reappraisal

NASA Astrophysics Data System (ADS)

Machel, Hans-G.; Mountjoy, Eric W.

1986-05-01

Dolomitization of calcium carbonate can best be expressed by mass transfer reactions that allow for volume gain, preservation, or loss during the replacement process. Experimental data, as well as textures and porosities of natural dolomites, indicate that these reactions must include CO 32- and/or HCO 3- supplied by the solution to the reaction site. Since dolomite formation is thermodynamically favoured in solutions of (a) low Ca 2+/Mg 2+ ratios, (b) low Ca 2+/CO 32- (or Ca 2+/HCO 3-) ratios, and (c) high temperatures, the thermodynamic stability for the system calcite-dolomite-water is best represented in a diagram with these three parameters as axes. Kinetic considerations favour dolomitization under the same conditions, and additionally at low as well as at high salinities. If thermodynamic and kinetic considerations are combined, the following conditions and environments are considered chemically conducive to dolomitization: (1) environments of any salinity above thermodynamic and kinetic saturation with respect to dolomite (i.e. freshwater/seawater mixing zones, normal saline to hypersaline subtidal environments, hypersaline supratidal environments, schizohaline environments); (2) alkaline environments (i.e. those under the influence of bacterial reduction and/or fermentation processes, or with high input of alkaline continental groundwaters); and (3) many environments with temperatures greater than about 50°C (subsurface and hydrothermal environments). Whether or not massive, replacive dolostones are formed in these environments depends on a sufficient supply of magnesium, and thus on hydrologic parameters. Most massive dolostones, particularly those consisting of shallowing-upward cycles and capped by regional unconformities, have been interpreted to be formed according to either the freshwater/seawater mixing model or the sabkha with reflux model. However, close examination of natural mixing zones and exposed evaporitic environments reveals that the amounts of dolomite formed are small and texturally different from the massive, replacive dolostones commonly inferred to have been formed in these environments. Many shallowing-upward sequences are devoid of dolomite. It is therefore suggested that massive, replacive dolomitization during exposure is rare, if not impossible. Rather, only small quantities of dolomite (cement or replacement) are formed which may act as nuclei for later subsurface dolomitization. Alternatively, large-scale dolomitization may take place in shallow subtidal environments of moderate to strong hypersalinity. The integration of stratigraphic, petrographic, geochemical, and hydrological parameters suggests that the only environments capable of forming massive, replacive dolostones on a large scale are shallow, hypersaline subtidal environments and certain subsurface environments.

Interspecific- and acclimation-induced variation in levels of heat-shock proteins 70 (hsp70) and 90 (hsp90) and heat-shock transcription factor-1 (HSF1) in congeneric marine snails (genus Tegula): implications for regulation of hsp gene expression.

PubMed

Tomanek, Lars; Somero, George N

2002-03-01

In our previous studies of heat-shock protein (hsp) expression in congeneric marine gastropods of the genus Tegula, we observed interspecific and acclimation-induced variation in the temperatures at which heat-shock gene expression is induced (T(on)). To investigate the factors responsible for these inter- and intraspecific differences in T(on), we tested the predictions of the 'cellular thermometer' model for the transcriptional regulation of hsp expression. According to this model, hsps not active in chaperoning unfolded proteins bind to a transcription factor, heat-shock factor-1 (HSF1), thereby reducing the levels of free HSF1 that are available to bind to the heat-shock element, a regulatory element upstream of hsp genes. Under stress, hsps bind to denatured proteins, releasing HSF1, which can now activate hsp gene transcription. Thus, elevated levels of heat-shock proteins of the 40, 70 and 90 kDa families (hsp 40, hsp70 and hsp90, respectively) would be predicted to elevate T(on). Conversely, elevated levels of HSF1 would be predicted to decrease T(on). Following laboratory acclimation to 13, 18 and 23 degrees C, we used solid-phase immunochemistry (western analysis) to quantify endogenous levels of two hsp70 isoforms (hsp74 and hsp72), hsp90 and HSF1 in the low- to mid-intertidal species Tegula funebralis and in two subtidal to low-intertidal congeners, T. brunnea and T. montereyi. We found higher endogenous levels of hsp72 (a strongly heat-induced isoform) at 13 and 18 degrees C in T. funebralis in comparison with T. brunnea and T. montereyi. However, T. funebralis also had higher levels of HSF1 than its congeners. The higher levels of HSF1 in T. funebralis cannot, within the framework of the cellular thermometer model, account for the higher T(on) observed for this species, although they may explain why T. funebralis is able to induce the heat-shock response more rapidly than T. brunnea. However, the cellular thermometer model does appear to explain the cause of the increases in T(on) that occurred during warm acclimation of the two subtidal species, in which warm acclimation was accompanied by increased levels of hsp72, hsp74 and hsp90, whereas levels of HSF1 remained stable. T. funebralis, which experiences greater heat stress than its subtidal congeners, consistently had higher ratios of hsp72 to hsp74 than its congeners, although the sum of levels of the two isoforms was similar for all three species except at the highest acclimation temperature (23 degrees C). The ratio of hsp72 to hsp74 may provide a more accurate estimate of environmental heat stress than the total concentrations of both hsp70 isoforms.

Altimetry in Marginal, Semi-Enclosed and Coastal Seas. Part 1; Marginal and Semi-Enclosed Seas

NASA Technical Reports Server (NTRS)

Kantha, Lakshmi H.; Beitzell, Diane M.; Harper, Scott L.; Leben, Robert R.

1994-01-01

The objective of this research is to deduce subtidal sea level anomalies in marginal, semi enclosed and coastal seas around the world from altimetric observations so that this data resource can be used both by itself and in conjunction with numerical circulation models to better understand and predict the circulation in these seas. The regions of interest include bodies of water that form the periphery of the principal ocean basins, both here and abroad as shown in the world bathymetry map.

Characterization of marine macroalgae by fluorescence signatures

NASA Technical Reports Server (NTRS)

Topinka, J. A.; Bellows, W. Korjeff; Yentsch, C. S.

1990-01-01

The feasibility of distinguishing macroalgal classes by their fluorescence signatures was investigated using narrow-waveband light to excite groups of accessory pigments in brown, red, and green macroalgae and measuring fluorescence emission at 685 nm. Results obtained on 20 marine macroalgae field-collected samples showed that fluorescence excitation signatures were relatively uniform within phylogenetic classes but were substantially different for different classes. It is suggested that it may be possible to characterize the type and the abundance of subtidal macroalgae from low-flying aircraft using existing laser-induced fluorescence methodology.

Bored to Death: Community-Wide Effect of Predation on a Foundation Species in a Low-Disturbance Arctic Subtidal System.

PubMed

Yakovis, Eugeniy; Artemieva, Anna

2015-01-01

The strength of top-down control by consumers is predicted to decrease with latitude, but most data confirming this assumption come from latitudes <60°, while empirical studies of predation in sub-arctic and arctic marine habitats are few. A barnacle Balanus crenatus is a native foundation species in the shallow subtidal of the White Sea (65° N), hosting a diverse (250+ species) assemblage of macrobenthic organisms. On mixed sediments live barnacles share primary substrates (shells and gravel) with numerous empty barnacle tests, 7% of which had drill holes of an unidentified origin. We manipulated the densities of (i) adult muricid whelks Boreotrophon clathratus (of previously unknown feeding habits), to check if they prey on barnacles, (ii) other predators to reveal their effect on juvenile Boreotrophon, and (iii) empty tests to assess the community-wide effect of predation on barnacles. The abundance of drilled empty tests in the field correlated with that of Boreotrophon. A year-long caging experiment clearly confirmed predation, showing the highest barnacle mortality and proportion of drilled tests in whelk enclosures, and the lowest--in predator exclosure treatments. Boreotrophon preferred the barnacles attached to conspecifics to those from primary substrates. Because of its scarcity Boreotrophon had a minor direct effect on barnacle abundance in the field. Yet, initially defaunated empty tests and live barnacles developed markedly different macrobenthic assemblages, suggesting a strong indirect effect of the predation. Juvenile Boreotrophon were 5-6 times less abundant in open and partial cages than in exclosures and enclosures, which indicates that the recruitment and, consequently, the abundance of Boreotrophon and its predation on Balanus are top-down controlled by apex predators. In contrast, in tropical and temperate intertidal the predation on barnacles is stronger and primarily limited by environmental stress and prey availability.

Holocene coastal regression and facies patterns in a subtropical arid carbonate environment - The sabkha of Al-Zareq, Qatar

NASA Astrophysics Data System (ADS)

Engel, Max; Peis, Kim T.; Strohmenger, Christian J.; Pint, Anna; Rivers, John M.; Brückner, Helmut

2017-04-01

The Arabian Gulf is a semi-enclosed, shallow sea, which became flooded some 12,500 years ago. Current relative sea level was first reached c. 7000 to 6500 years ago, while a relative sea-level highstand of c. 2-4 m dates to around 6000-4500 years ago. Supratidal coastal sabkhas (former lagoons), stranded beach ridges and foredune sequences as well as abandoned tidal channels along the coasts of Qatar and the UAE witness this mid-Holocene peak in sea level. Regression since then triggered shoreline migration of up to several kilometers along the low-lying coasts of Qatar, for which, however, detailed reconstructions in space and time are scarce. This study presents facies changes and a scenario for the spatio-temporal evolution of the coastal area of Al Zareq in the inner Gulf of Salwa (SW Qatar), thereby also contributing to a better understanding of reservoirs that formed under arid climatic conditions. Ten vibracores (up to 8 m), two deep drillings (up to 20.5 m) and two trenches covering the entire transgression-regression cycle were investigated. In order to characterize and interpret facies types at Al-Zareq as well as to reconstruct sabkha formation in space and time, grain size and shape distribution (laser diffraction, camsizer), XRD, micro- and macrofossil contents and thin sections were analysed by applying qualitative interpretation, descriptive and multivariate statistics (PCA, MDA, end-member modelling), and RIR (XRD). Thirty-seven samples were radiocarbon dated and four samples were dated by optically stimulated luminescence (OSL). Depositional environments include the following types: eolian dune and interdune (in-situ or reworked), coastal sabkha (diagenetic), saline lake (salina), protected lagoon (sand- or carbonate-dominated), beach and beach spit, tidal channel and tidal bar, as well as open lagoon (low-energy, shallow-subtidal lagoon and low-energy deeper-subtidal).

The role of wave-exposure and human impacts in regulating the distribution of alternative habitats on NW Mediterranean rocky reefs

NASA Astrophysics Data System (ADS)

Bulleri, Fabio; Cucco, Andrea; Dal Bello, Martina; Maggi, Elena; Ravaglioli, Chiara; Benedetti-Cecchi, Lisandro

2018-02-01

The global decline of canopy-forming macroalgae has stimulated research on the mechanism regulating shifts among alternative habitats on rocky reefs. The effects of sea urchin grazing and alterations of environmental conditions are now acknowledged as the main drivers of shifts between canopy-formers and encrusting coralline barrens and algal turfs, respectively. The conditions under which these mechanisms operate remains, however, somewhat elusive. This is mostly a consequence of the fact that our current understanding has been generated by envisioning habitat shifts as dichotomic, at odds with rocky reef landscapes being composed by mosaics of habitats and with evidence of strong interactions among the species that compose each of the alternative habitats. Using data from a long-term sampling program and path analysis, we investigated how wave-exposure and human-induced degradation of environmental conditions regulate the mechanisms maintaining algal canopies formed by Cystoseira crinita, barren habitats and algal turfs as alternative states on subtidal reefs in the NW Mediterranean. In the Tuscan Archipelago, wave-exposure had positive effects on sea urchins, which, likely due to their low mean density, had weak effects on each of the alternative habitats. Canopy-forming macroalgae resulted, instead, to exert strong negative effects on the abundance of algal turfs. Since data from the Tuscan Archipelago did not explain any of the variation in the abundance of C. crinita canopies, a further analysis was performed including data from the coast of Tuscany to assess the role of cumulative human impacts in regulating habitat shifts. This showed that degradation of environmental conditions is a direct cause of the decline of macroalgal canopies, indirectly favouring the dominance of algal turfs. Our study suggests that management of human impacts should be considered a priority for preserving subtidal canopies formed by Cystoseira in the NW Mediterranean and that conservation efforts based exclusively on the control of sea urchin populations might be doomed to failure in some areas.

Gear and survey efficiency of patent tongs for oyster populations on restoration reefs.

PubMed

Schulte, David M; Lipcius, Romuald N; Burke, Russell P

2018-01-01

Surveys of restored oyster reefs need to produce accurate population estimates to assess the efficacy of restoration. Due to the complex structure of subtidal oyster reefs, one effective and efficient means to sample is by patent tongs, rather than SCUBA, dredges, or bottom cores. Restored reefs vary in relief and oyster density, either of which could affect survey efficiency. This study is the first to evaluate gear (the first full grab) and survey (which includes selecting a specific half portion of the first grab for further processing) efficiencies of hand-operated patent tongs as a function of reef height and oyster density on subtidal restoration reefs. In the Great Wicomico River, a tributary of lower Chesapeake Bay, restored reefs of high- and low-relief (25-45 cm, and 8-12 cm, respectively) were constructed throughout the river as the first large-scale oyster sanctuary reef restoration effort (sanctuary acreage > 20 ha at one site) in Chesapeake Bay. We designed a metal frame to guide a non-hydraulic mechanical patent tong repeatedly into the same plot on a restored reef until all oysters within the grab area were captured. Full capture was verified by an underwater remotely-operated vehicle. Samples (n = 19) were taken on nine different reefs, including five low- (n = 8) and four high-relief reefs (n = 11), over a two-year period. The gear efficiency of the patent tong was estimated to be 76% (± 5% standard error), whereas survey efficiency increased to 81% (± 10%) due to processing. Neither efficiency differed significantly between young-of-the-year oysters (spat) and adults, high- and low-relief reefs, or years. As this type of patent tong is a common and cost-effective tool to evaluate oyster restoration projects as well as population density on fished habitat, knowing the gear and survey efficiencies allows for accurate and precise population estimates.

Influence of a dominant consumer species reverses at increased diversity.

PubMed

Brandt, Margarita; Witman, Jon D; Chiriboga, Angel I

2012-04-01

Theory and experiments indicate that changes in consumer diversity affect benthic community structure and ecosystem functioning. Although the effects of consumer diversity have been tested in the laboratory and the field, little is known about effects of consumer diversity in the subtidal zone, one of the largest marine habitats. We investigated the grazing effects of sea urchins on algal abundance and benthic community structure in a natural subtidal habitat of the Galápagos Islands. Three species of urchins (Eucidaris, Lytechinus, and Tripneustes) were manipulated in inclusion cages following a replacement design with three levels of species richness (one, two, and three species) with all possible two-species urchin combinations. Identity was the main factor accounting for changes in the percentage of substrate grazed and benthic community structure. Two out of the three two-species assemblages grazed more than expected, suggesting a richness effect, but analyses revealed that this increased grazing was due to a sampling effect of the largest and commercially valued urchin species, Tripneustes. Benthic community structure in treatments with Eucidaris, Lytechinus, and Tripneustes alone was significantly different at the end of the experiment, suggesting that resource use differentiation occurred. Communities in Tripneustes enclosures were characterized by abundant crustose coralline algae and grazed substrate, while those without it contained abundant green foliose algae (Ulva sp.). An unexpected emergent property of the system was that the most species-rich urchin assemblage underyielded, grazing less than any other assemblage with Tripneustes, effectively reversing its dominant influence observed in the two-species treatments. While further experiments are needed to discern the mechanisms of underyielding, it may be related to changing interspecific interactions as richness increases from two to three species or to density-dependent Tripneustes grazing. This study highlights the general importance of evaluating consumer richness effects across the entire range of species richness considered, as the performance of the most species-rich consumer assemblage could not be predicted by manipulations of intermediate levels of consumer species richness.

Deposition of shallow water sponges in response to seasonal changes

NASA Astrophysics Data System (ADS)

Ávila, Enrique; Carballo, José Luis; Vega, Cristina; Camacho, Leonardo; Barrón-Álvarez, José J.; Padilla-Verdín, Claudia; Yáñez-Chávez, Benjamín

2011-08-01

Removal of organisms from the subtidal zone plays an important role in shaping benthic communities in shallow bays. The main objective of this research was to quantify the biomass of sponges washed up on the beach at Mazatlan Bay (Mexico, eastern Pacific Ocean), and to determine its relationship with local weather and oceanographic conditions. To know whether this process has a significant effect on the sponge populations, changes in abundance of the species washed into the beach were also quantified in adjoining sublittoral areas. The sponges that were washed ashore were mainly branching ( Mycale ramulosa), massive ( Haliclona caerulea) and cushion-shaped ( Callyspongia californica) species. Species with high content of spongin in their structure (e.g. Hyattella intestinalis) were common in the subtidal zone but were rarely found on the beach. Encrusting species were never found. Four-year data of sponge deposition on the beach showed that the total annual sponge biomass ranged from 30 to 60 g DW m - 2 with an inter-annual range from 0.1 to 17.3 g DW m - 2 . The highest deposition of sponges was during the spring-summer transition (from April to July), which was associated with a change in wind direction (from NW to WSW). This change also matched with low tides and a high resuspension of bottom sediments, suggesting a high-energy environment during this transition. The increase in sponge biomass washed on the beach coincided with a decrease in the density of adjacent sponge populations. A multiple regression analysis showed that 68.48% of the variation on sponge biomass on the beach could be statistically explained using a combination of environmental factors (wind speed, sediment resuspension and tides). Thus, seasonal changes in wind direction combined with the effect of low tides and sediment resuspension could serve to predict fragmentation/detachment events of benthic organisms in shallow sublittoral areas worldwide. This study also provides insights to explain the predominance of encrusting sponges in the Mexican Pacific Ocean.

Lethal and sub-lethal effects of elevated CO2 concentrations on marine benthic invertebrates and fish.

PubMed

Lee, Changkeun; Hong, Seongjin; Kwon, Bong-Oh; Lee, Jung-Ho; Ryu, Jongseong; Park, Young-Gyu; Kang, Seong-Gil; Khim, Jong Seong

2016-08-01

Concern about leakage of carbon dioxide (CO2) from deep-sea storage in geological reservoirs is increasing because of its possible adverse effects on marine organisms locally or at nearby coastal areas both in sediment and water column. In the present study, we examined how elevated CO2 affects various intertidal epibenthic (benthic copepod), intertidal endobenthic (Manila clam and Venus clam), sub-tidal benthic (brittle starfish), and free-living (marine medaka) organisms in areas expected to be impacted by leakage. Acute lethal and sub-lethal effects were detected in the adult stage of all test organisms exposed to varying concentrations of CO2, due to the associated decline in pH (8.3 to 5.2) during 96-h exposure. However, intertidal organisms (such as benthic copepods and clams) showed remarkable resistance to elevated CO2, with the Venus clam being the most tolerant (LpH50 = 5.45). Sub-tidal species (such as brittle starfish [LpH50 = 6.16] and marine medaka [LpH50 = 5.91]) were more sensitive to elevated CO2 compared to intertidal species, possibly because they have fewer defensive capabilities. Of note, the exposure duration might regulate the degree of acute sub-lethal effects, as evidenced by the Venus clam, which showed a time-dependent effect to elevated CO2. Finally, copper was chosen as a model toxic element to find out the synergistic or antagonistic effects between ocean acidification and metal pollution. Combination of CO2 and Cu exposure enhances the adverse effects to organisms, generally supporting a synergistic effect scenario. Overall, the significant variation in the degree to which CO2 adversely affected organisms (viz., working range and strength) was clearly observed, supporting the general concept of species-dependent effects of elevated CO2.

Effects of oyster harvest activities on Louisiana reef habitat and resident nekton communities

USGS Publications Warehouse

Beck, Steve; LaPeyre, Megan K.

2015-01-01

Oysters are often cited as “ecosystem engineers” because they modify their environment. Coastal Louisiana contains extensive oyster reef areas that have been harvested for decades, and whether differences in habitat functions exist between those areas and nonharvested reefs is unclear. We compared reef physical structure and resident community metrics between these 2 subtidal reef types. Harvested reefs were more fragmented and had lower densities of live eastern oysters (Crassostrea virginica) and hooked mussels (Ischadium recurvum) than the nonharvested reefs. Stable isotope values (13C and 15N) of dominant nekton species and basal food sources were used to compare food web characteristics. Nonpelagic source contributions and trophic positions of dominant species were slightly elevated at harvested sites. Oyster harvesting appeared to have decreased the number of large oysters and to have increased the percentage of reefs that were nonliving by decreasing water column filtration and benthopelagic coupling. The differences in reef matrix composition, however, had little effect on resident nekton communities. Understanding the thresholds of reef habitat areas, the oyster density or oyster size distribution below which ecosystem services may be compromised, remains key to sustainable management.

Determining bathymetric distributions of the eelgrass Zostera ...

EPA Pesticide Factsheets

Improved methods for determining bathymetric distributions of dominant intertidal plants throughout their estuarine range are needed. Zostera marina is a seagrass native to estuaries of the northeastern Pacific and many other sectors of the world ocean. The technique described here employed large format aerial photography using false color near-infrared film with digital image classification, and the production of digital bathymetric models of shallow estuaries such as those occurring in turbid waters of the Pacific Northwest USA. Application of geographic information system procedures to the eelgrass classifications and bathymetry distributions yielded digital bathymetric distributions based upon a very large number of observations. Similar bathymetric patterns were obtained for the three estuaries surveyed, and approximately 90% of the classified eelgrass occurred within the depth range -1.0 m to +1.0 m (MLLW). Comparison of these distributions with ground surveys of eelgrass lower depth limits indicated that the area of undetected subtidal eelgrass constituted 86% overall accuracy) in each estuary. The pattern of eelgrass in one estuary was distinctly different from those in the other two systems, illustrating the potential usefulness of this technique in exploring causative factors for such differences in estuarine intertidal vegetation distributions. Improved methods for determining bathymetric distributions of dominant intertidal plants throughout

Mediterranean sponges from shallow subtidal rocky reefs: Cystoseira canopy vs barren grounds

NASA Astrophysics Data System (ADS)

Costa, Gabriele; Bertolino, Marco; Pinna, Stefania; Bonaviri, Chiara; Padiglia, Andrea; Zinni, Matteo; Pronzato, Roberto; Manconi, Renata

2018-07-01

Porifera richness was investigated in Cystoseira canopies vs barren grounds considering different substrates at 6 areas in the Central-Western Mediterranean Sea. In total 31 sponge taxa were recorded at 2-7 m depth and the sponge community structure and composition were characterized by a notably low richness with 25 taxa in the Cystoseira forest and 15 in the barren area. As for the sponge habitus, the massive sponges were dominant in both facies, whereas encrusting, and cavity dwelling sponges were found in higher numbers in the Cystoseira forest. Results revealed that rocky substrata seem to play a key role in driving the sponge community composition and diversity in both facies. In this work we explore the role of Cystoseira canopy as a suitable facies for sponges. Sponge assemblages were persistent, strongly resilient in space occupation and consequently support stability in both facies. Some species seem to be pre-adapted to live under the sub-optimal conditions of the barren grounds, i.e. the absence of the Cystoseira fronds shelter. This focus on sponge successful eco-etological performances in 'submarine deserts' such as barren areas shows features as shown in a few other sessile benthic invertebrates.

Relationships between diatoms and tidal environments in Oregon and Washington, USA

USGS Publications Warehouse

Sawai, Yuki; Horton, Benjamin P.; Kemp, Andrew C.; Hawkes, Andrea D.; Nagumo, Tamostsu; Nelson, Alan R.

2016-01-01

A new regional dataset comprising 425 intertidal diatom taxa from 175 samples from 11 ecologically diverse Oregon and Washington estuaries illustrates the importance of compiling a large modern dataset from a range of sites. Cluster analyses and detrended correspondence analysis of the diatom assemblages identify distinct vertical zones within supratidal, intertidal and subtidal environments at six of the 11 study sites, but the abundance of some of the most common species varies widely among and within sites. Canonical correspondence analysis of the regional dataset shows relationships between diatom species and tidal exposure, salinity and substratum (grain size and organic content). Correspondence analyses of local datasets show higher values of explained variation than the analysis of the combined regional dataset. Our results emphasize that studies of the autecology of diatom species require many samples from a range of modern environments to adequately characterize species–environment relationships.

Biodiversity and density of subtidal benthos of an oceanic tropical island (a comparison within the Pacific Ocean)

NASA Astrophysics Data System (ADS)

Sibaja-Cordero, Jeffrey A.; Troncoso, Jesús S.; Cortés, Jorge; Moreira, Juan; Vargas, José A.; Benavides-Varela, Catalina

2016-09-01

The marine macrofauna of the shallow sandy bottom of Isla del Coco, Costa Rica (5°32‧N-87°04‧W) was assessed in April 2010. Comparisons of richness, density and diversity between levels of exposure to ocean influence were carried out. During this study 15,407 specimens with a mean density of 1826 ind m- 2 were found between 3-75 m depth. The specimens were distributed in 267 taxa (29% new additions) with a mean of 55 ± 14 expected taxa m- 2. The values of density, richness and diversity were higher at the exposed coast, whereas they decreased at inner bays due to the influence of freshwater input. These estimates were compared with 40 studies in the Tropical Pacific Ocean (TPO). Taxa and density previously reported from the TPO were dependent on the area and depth range studied. Additionally, these parameters varied according to the sampling gear used. For example, higher densities were reported by using corers or boxcorers. The Shannon-Wiener index was most effective in identifying sediment and geographical patterns of variation along the TPO. Differences in these diversity parameters were also found between islands and mainland studies. Moreover, richness and density values from Isla del Coco were higher than the same parameters reported in studies using grabs in the TPO. At Isla del Coco annelids were dominant in terms of relative abundance (49.6%), followed by crustaceans (10.1%), mollusks (2.8%), and others faunal groups (37.5%). The faunistic composition at Isla del Coco differed when compared to the rest of localities of TPO due to the higher contribution of miscellaneous groups. In conclusion, the comparison with previous studies in the TPO indicate that islands like Isla del Coco have high numbers of taxa and diversity than those of the mainland, but lower density. However, this value is influenced by the sampling methodology. The taxa accumulation curve at Isla del Coco did not reach the asymptote, suggesting that an intensive sampling, especially at deep waters, would increase the number of taxa.

Levels and distributions of organic pollutants in subtidal sediments from the Loire estuary: Are there any relationships with TTR-binding activity?

NASA Astrophysics Data System (ADS)

Couderc, M.; Gandolfi, F.; Zalouk-Vergnoux, A.; Beyeler, N.; Malleret, L.; Ambidina, I.; Kamari, A.; Blanchet-Letrouvé, I.; Mouneyrac, C.; Hamers, T.; Poirier, L.

2016-12-01

The Loire estuary runs through important urban sites with shipping, industrial and agricultural activities, being the receptacle of diffusive pollutants comprising, a mixture of contaminants such as persistent organic pollutants (POPs). This work was set out to evaluate the occurrence of thyroid endocrine disruptors in sediments of this estuary. Sediments were collected in September 2012 and April 2013, in subtidal zones along the estuary. Targeted chemical analyses of five classes of pollutants, i.e. polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs), polycyclic aromatic hydrocarbons (PAHs), alkylphenols (APs), and bisphenol A (BPA) were performed in sediment extracts. Extracts were further tested for their thyroid hormone (TH) disrupting potency to compete with TH for binding to its transporter protein transthyretin (TTR). The Haute-Indre site was characterized by a significant PAH contamination whereas Saint-Nazaire, Bellevue and Rezé would be particularly contaminated by PCBs. These observations could be linked to the different type of anthropogenic activities taking place close to these sites. Donges, Mindin and Paimboeuf were the sampling sites displaying the lowest contamination in PAHs, APs, PCBs and PBDEs. No inter-site difference could be observed for TTR-binding activity, which should be attributed to different compounds than the chemically analyzed compounds, as confirmed by PCA analyses. Furthermore, the TTR-binding potencies of the extracts were relatively low compared to data from literature. More investigations on the quantification of PCB and PBDE hydroxylated metabolites and other known endocrine disruptors such as pesticides or perfluorinated compounds could be considered, as well as bioassays highlighting other endocrine disrupting effects.

The tidally averaged momentum balance in a partially and periodically stratified estuary

USGS Publications Warehouse

Stacey, M.T.; Brennan, Matthew L.; Burau, J.R.; Monismith, Stephen G.

2010-01-01

Observations of turbulent stresses and mean velocities over an entire spring-neap cycle are used to evaluate the dynamics of tidally averaged flows in a partially stratified estuarine channel. In a depth-averaged sense, the net flow in this channel is up estuary due to interaction of tidal forcing with the geometry of the larger basin. The depth-variable tidally averaged flow has the form of an estuarine exchange flow (downstream at the surface, upstream at depth) and varies in response to the neap-spring transition. The weakening of the tidally averaged exchange during the spring tides appears to be a result of decreased stratification on the tidal time scale rather than changes in bed stress. The dynamics of the estuarine exchange flow are defined by a balance between the vertical divergence of the tidally averaged turbulent stress and the tidally averaged pressure gradient in the lower water column. In the upper water column, tidal stresses are important contributors, particularly during the neap tides. The usefulness of an effective eddy viscosity in the tidally averaged momentum equation is explored, and it is seen that the effective eddy viscosity on the subtidal time scale would need to be negative to close the momentum balance. This is due to the dominant contribution of tidally varying turbulent momentum fluxes, which have no specific relation to the subtidal circulation. Using a water column model, the validity of an effective eddy viscosity is explored; for periodically stratified water columns, a negative effective viscosity is required. ?? 2010 American Meteorological Society.

Australian shellfish ecosystems: Past distribution, current status and future direction.

PubMed

Gillies, Chris L; McLeod, Ian M; Alleway, Heidi K; Cook, Peter; Crawford, Christine; Creighton, Colin; Diggles, Ben; Ford, John; Hamer, Paul; Heller-Wagner, Gideon; Lebrault, Emma; Le Port, Agnès; Russell, Kylie; Sheaves, Marcus; Warnock, Bryn

2018-01-01

We review the status of marine shellfish ecosystems formed primarily by bivalves in Australia, including: identifying ecosystem-forming species, assessing their historical and current extent, causes for decline and past and present management. Fourteen species of bivalves were identified as developing complex, three-dimensional reef or bed ecosystems in intertidal and subtidal areas across tropical, subtropical and temperate Australia. A dramatic decline in the extent and condition of Australia's two most common shellfish ecosystems, developed by Saccostrea glomerata and Ostrea angasi oysters, occurred during the mid-1800s to early 1900s in concurrence with extensive harvesting for food and lime production, ecosystem modification, disease outbreaks and a decline in water quality. Out of 118 historical locations containing O. angasi-developed ecosystems, only one location still contains the ecosystem whilst only six locations are known to still contain S. glomerata-developed ecosystems out of 60 historical locations. Ecosystems developed by the introduced oyster Crasostrea gigas are likely to be increasing in extent, whilst data on the remaining 11 ecosystem-forming species are limited, preventing a detailed assessment of their current ecosystem-forming status. Our analysis identifies that current knowledge on extent, physical characteristics, biodiversity and ecosystem services of Australian shellfish ecosystems is extremely limited. Despite the limited information on shellfish ecosystems, a number of restoration projects have recently been initiated across Australia and we propose a number of existing government policies and conservation mechanisms, if enacted, would readily serve to support the future conservation and recovery of Australia's shellfish ecosystems.

Trace fossils and sedimentary facies from a Late Cambrian‐Early Ordovician tide‐dominated shelf (Santa Rosita Formation, northwest Argentina): Implications for ichnofacies models of shallow marine successions

USGS Publications Warehouse

Mángano, M. Gabriela; Buatois, Luis A.; Aceñolaza, Guillermo F.

1996-01-01

The Santa Rosita Formation is one the most widely distributed lower Paleozoic units of northwest Argentina. At the Quebrada del Salto Alto section, east of Purmamarca, Jujuy Province, it is represented by four sedimentary facies: thick‐bedded planar cross‐stratified quartzose sandstones (A), thin‐bedded planar cross‐stratified quartzose sandstones and mudstones (B), wave‐rippled sandstones and bioturbated mudstones (C), and black and greenish gray shales (D). Paleocurrent data, sandstone architecture, and sedimentary structures from faciès A and B indicate bipolar/bimodal paleoflows, suggesting the action of tidal currents. The succession is interpreted as that of a tide‐dominated shelf, with only secondary influence of wave processes. Trace fossils are restricted to facies B and C.The Cruziana ichnocoenosis is preserved on the soles of thin‐bedded planar cross‐stratified quartzose sandstones (faciès B). This ichnocoenosis consists of Conostichus isp., Cruziana omanica, C. semiplicata, C. cf. tortworthi, Cruziana isp. Helminthopsis abeli, Monomorphichnus bilinearis, M. multilineatus, Palaeophycus tubularis, Rusophycus carbonarias, R. latus, and R. isp. The occurrence of Cruziana semiplicata, C. omanica, C. cf. tortworthi, and Rusophycus latus supports a Late Cambrian‐Tremadoc age. Slabbing of Cruziana shows complex interactions between biologic and sedimentologic processes, and suggests a predominance of exhumed traces, washed out and recast by tractive sand deposition. Sandstone soles are densely packed with biogenic structures and exhibit distinctive clusters of Rusophycus isp. that most likely represent trilobite nesting burrows. The Cruziana ichnocoenosis records the resident fauna of a protected, lower intertidal to subtidal interbar setting.The Skolithos ichnocoenosis is represented by high to low density vertical burrows of Skolithos linearis, which extend downwards to the quartzose sandstone soles of faciès B and cross the Cruziana ichnocoenosis. The Skolithos ichnocoenosis represents colonization by suspension‐feeding organisms following a major change in environmental conditions, related to the migration of lower intertidal to subtidal sandwaves.The Planolites ichnocoenosis consists exclusively of Planolites montanus within mudstones overlying wave‐rippled sandstones (facies C). The Planolites ichnocoenosis records opportunistic colonization by inf aunal deposit feeders that mined the organic‐rich fine‐grained sediment during the waning phase of storms that scoured organic detritus from the sea bottom.The section records, from base to top, a Cruziana‐Skolithos ichnofacies zone, a Skolithos ichnofacies zone and an unbioturbated zone typified by the thick‐bedded cross‐stratified quartzose sandstone (fades A). This trend reflects progressively higher energy conditions linked to the establishment of a large sand wave complex. The presence of a mixed Cruziana‐Skolithos ichnofacies in the lower interval reflects changes in substrate and energy levels, rather than water depth. Accordingly, contrasting ichnocoenoses from interbars (Cruziana) and sandwaves (Skolithos) must be considered an example of ichnofacies controlled by local parameters instead of general bathymétrie trends. Conversely, the vertical replacement of the Cruziana ichnofacies by the Skolithos ichnofacies towards the middle interval of the section reflects the environmental changes associated with the transition between the intertidal and subtidal zones. As overall tidal energy increases from supratidal to subtidal settings, the Skolithos ichnofacies tends to occur seaward of the Cruzianaichnofacies in tide‐dominated shallow marine environments. Therefore, onshore‐offshore ichnofacies replacement in tide‐dominated shallow seas is opposite to that in wave‐dominated marine settings.

Ecological effects of a major oil spill on Panamanian coastal marine communities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jackson, J.B.C.; Cubit, J.D.; Keller, B.D.

1989-01-06

In 1986 more than 8 million liters of crude oil spilled into a complex region of mangroves, seagrasses, and coral reefs just east of the Caribbean entrance to the Panama Canal. This was the largest recorded spill into coastal habitats in the tropical Americas. Many populations of plants and animals in both oiled and unoiled sites had been studied previously, thereby providing an unprecedented measure of ecological variation before the spill. Documentation of the spread of oil and its biological effects begun immediately. Intertidal mangroves, seagrasses, algae, and associated invertebrates were covered by oil and died soon after. More surprisingly,more » there was also extensive mortality of shallow subtidal reef corals and infauna of seagrass beds. After 1.5 years only some organisms in areas exposed to the open sea have recovered.« less

Extending the southern range of four shrimps (Crustacea: Decapoda: Stenopodidae, Hippolytidae and Alpheidae) in southwestern Atlantic (27^o S) and confirming the presence of Mediterranean Stenopus spinosus Risso, 1827 in Brazil.

PubMed

Giraldes, Bruno Welter; Freire, Andrea Santarosa

2015-06-12

In subtidal zones, certain shrimp species with cryptic behaviour represent a gap in the biodiversity description in many places in the world. This study extends the southern limit of Stenopus hispidus (Oliver, 1811), Alpheus formosus Gibbes, 1850, Alpheus cf. packardii Kingsley, 1880 and Lysmata ankeri Rhyne & Lin, 2006 to Santa Catarina State-Brazil, 27^oS. The results also confirm the new occurrence of Stenopus spinosus Risso, 1827 in Brazilian waters. All specimens were collected by scuba diving from rocky islands between 3 and 25 meters depth. We present for each species certain taxonomic features in colour images that will help to identify these decapods in situ in further monitoring programs.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jewett, S.C.; Dean, T.A.; Smith, R.O.

Injuries to several of the dominant taxa in the nearshore subtidal community were observed in the heavily oiled portions of western Prince William Sound following the Exxon Valdez oil spill of March 1989. The initial effects were most pronounced in more protected eelgrass and silled fjord habitats, where PAH (polycyclic aromatic hydrocarbon) concentrations in sediments exceeded 1000 ng g-1 in 1990. By 1993, PAH concentrations in sediments declined to less than 100 ng g-1, and there were far fewer differences between oiled and control sites with respect to the abundance of dominant plant, invertebrate, and fish taxa. However, not allmore » taxa had recovered fully.« less

Baseline data for evaluating development trajectory and provision of ecosystem services of created fringing oyster reefs in Vermilion Bay, Louisiana

USGS Publications Warehouse

La Peyre, Megan K.; Schwarting, Lindsay; Miller, Shea

2013-01-01

Understanding the time frame in which ecosystem services (that is, water quality maintenance, shoreline protection, habitat provision) are expected to be provided is important when restoration projects are being designed and implemented. Restoration of three-dimensional shell habitats in coastal Louisiana and elsewhere presents a valuable and potentially self-sustaining approach to providing shoreline protection, enhancing nekton habitat, and providing water quality maintenance. As with most restoration projects, the development of expected different ecosystem services often occurs over varying time frames, with some services provided immediately and others taking longer to develop. This project was designed initially to compare the provision and development of ecosystem services by created fringing shoreline reefs in subtidal and intertidal environments in Vermilion Bay, Louisiana. Specifically, the goal was to test the null hypothesis that over time, the oyster recruitment and development of a sustainable oyster reef community would be similar at both intertidal and subtidal reef bases, and these sustainable reefs would in time provide similar shoreline stabilization, nekton habitat, and water quality services over similar time frames. Because the ecosystem services hypothesized to be provided by oyster reefs reflect long-term processes, fully testing the above-stated null hypothesis requires a longer-time frame than this project allowed. As such, this project was designed to provide the initial data on reef development and provision of ecosystem services, to identify services that may develop immediately, and to provide baseline data to allow for longer-term follow up studies tracking reef development over time. Unfortunately, these initially created reef bases (subtidal, intertidal) were not constructed as planned because of the Deepwater Horizon oil spill in April 2010, which resulted in reef duplicates being created 6 months apart. Further confounding the project were additional construction and restoration projects along the same shorelines which occurred between 2011 and June 2012. Because of constant activity near and around the reefs and continuing construction, development trajectories could not be compared among reef types at this time. This report presents the data collected at the sites over 3 years (2010–2012), describing only conditions and trends. In addition, these data provide an extensive and detailed dataset documenting initial conditions and initial ecosystem changes which will prove valuable in future data collection and analyses of reef development at this site. Data collection characterized the local water quality conditions (salinity, temperature, total suspended sediments, dissolved oxygen, chlorophyll a), adjacent marsh vegetation, soils, and shoreline position along the project shoreline at Vermilion Bay. During the study, marsh vegetation and soil characteristics were similar across the study area and did not change over time. Shoreline movement indicated shoreline loss at all sites, which varied by reefs. Water quality conditions followed expected seasonal patterns for this region, and no significant nonseasonal changes were measured throughout the study period. Despite oyster recruitment in fall 2010 and 2011, few if any oysters survived from the 2010 year class to 2012. At the last sampling of this project, some oysters recruited in fall 2011 survived through 2012, resulting in an on-reef density of 18.3 ± 2.1 individuals per square meter (mean size: 85.6 ± 2.2 millimeters). Because project goals were to compare reef development and provision of ecosystem services over time, as well as many of the processes identified for monitoring reflect long-term processes, results and data are presented only qualitatively, and trends or observations should be interpreted cautiously at this point. Measurable system responses to reef establishment require more time than was available for this study. These data provide a valuable baseline that can be ultimately used to help inform site selections for future restoration projects as well to further investigate the development trajectories of ecosystem provision of created reefs in this region.

Spatial distribution of living (Rose Bengal stained) benthic foraminifera in the Loire estuary (western France)

NASA Astrophysics Data System (ADS)

Mojtahid, M.; Geslin, E.; Coynel, A.; Gorse, L.; Vella, C.; Davranche, A.; Zozzolo, L.; Blanchet, L.; Bénéteau, E.; Maillet, G.

2016-12-01

Ninety-seven surface sediment samples were collected in September 2012 from intertidal and subtidal areas along the Loire estuary (western France). The main objective of this work is to study the spatial distributional patterns of living benthic foraminifera and their link to the environmental parameters (distance to sea, elevation, grain size, total organic carbon, trace metals, sedimentary carbonates, and polycyclic aromatic hydrocarbons) in the Loire estuary. Foraminiferal analysis was also extended to the dead assemblages in thirty-three surface samples from the lower inner estuary. The highest absolute densities of living benthic foraminifera are found in the lower inner estuary within the polyhaline domain. This is attributed to the presence of mudflats with abundant food source, i.e. microphytobenthos. The low densities found in the outer estuary (euhaline domain) are attributed partly to the sandy nature of the sediments and the food source inhabiting this substrate. The near absence of foraminifera in the inner estuary (mesohaline and polyhaline domains) is inferred to the physical disturbance resulting from the regular dredging of the navigation channel. The living assemblages are dominated by three typical estuarine species: Ammonia tepida and Haynesina germanica in the intertidal mudflats of the lower inner estuary and Cribroelphidium excavatum in the sandy subtidal sediments of the lower inner and outer estuary. In the Loire estuary, H. germanica has an unusual intermediate geographical distribution along the estuary between A. tepida and C. excavatum while in most temperate estuaries this species is present upstream in the mesohaline domain. This is most likely the result of the regular dredging of the navigation channel damaging its natural habitat. This might be also the explanation for the total absence of agglutinated species usually dominating the oligohaline domain. The canonical correspondence analysis shows that elevation (and its link to time of emersion), distance to sea (and its correspondence with salinity), and organic carbon content appear to be the primary drivers of foraminiferal distribution. The present study provides for the first time ecological and distribution patterns of living benthic foraminiferal communities in the Loire estuary. This baseline knowledge is necessary for the future studies focusing on the use of benthic foraminifera as bio-indicators in the Loire estuary and in transitional environments in general.

Occurrence and behavior of butyltins in intertidal and shallow subtidal surface sediments of an estuarine beach under different sampling conditions

NASA Astrophysics Data System (ADS)

Santos, Dayana Moscardi dos; Sant'Anna, Bruno Sampaio; Sandron, Daniela Corsino; Cardoso de Souza, Sara; Cristale, Joyce; Marchi, Mary Rosa Rodrigues de; Turra, Alexander

2010-07-01

Contamination by butyltin compounds (BTs) has been reported in estuarine environments worldwide, with serious impacts on the biota of these areas. Considering that BTs can be degraded by varying environmental conditions such as incident light and salinity, the short-term variations in such factors may lead to inaccurate estimates of BTs concentrations in nature. Therefore, the present study aimed to evaluate the possibility that measurements of BTs in estuarine sediments are influenced by different sampling conditions, including period of the day (day or night), tidal zone (intertidal or subtidal), and tides (high or low). The study area is located on the Brazilian southeastern coast, São Vicente Estuary, at Pescadores Beach, where BT contamination was previously detected. Three replicate samples of surface sediment were collected randomly in each combination of period of the day, tidal zone, and tide condition, from three subareas along the beach, totaling 72 samples. BTs were analyzed by GC-PFPD using a tin filter and a VF-5 column, by means of a validated method. The concentrations of tributyltin (TBT), dibutyltin (DBT), and monobutyltin (MBT) ranged from undetectable to 161 ng Sn g -1 (d.w.). In most samples (71%), only MBT was quantifiable, whereas TBTs were measured in only 14, suggesting either an old contamination or rapid degradation processes. DBT was found in 27 samples, but could be quantified in only one. MBT concentrations did not differ significantly with time of day, zones, or tide conditions. DBT and TBT could not be compared under all these environmental conditions, because only a few samples were above the quantification limit. Pooled samples of TBT did not reveal any difference between day and night. These results indicated that, in assessing contamination by butyltin compounds, surface-sediment samples can be collected in any environmental conditions. However, the wide variation of BTs concentrations in the study area, i.e., over a very small geographic scale, illustrates the need for representative hierarchical and composite sampling designs that are compatible with the multiscalar temporal and spatial variability common to most marine systems. The use of such sampling designs will be necessary for future attempts to quantitatively evaluate and monitor the occurrence and impact of these compounds in nature.

Continuous pCO2 time series from Ocean Networks Canada cabled observatories at the northeast Pacific shelf edge and in the sub-tidal Arctic

NASA Astrophysics Data System (ADS)

Juniper, S. Kim; Sastri, Akash; Mihaly, Steven; Duke, Patrick; Else, Brent; Thomas, Helmuth; Miller, Lisa

2017-04-01

Marine pCO2 sensor technology has progressed to the point where months-long time series from remotely-deployed pCO2 sensors can be used to document seasonal and higher frequency variability in pCO2 and its relationship to oceanographic processes. Ocean Networks Canada recently deployed pCO2 sensors on two cabled platforms: a bottom-moored (400 m depth), vertical profiler at the edge of the northeast Pacific continental shelf off Vancouver Island, Canada, and a subtidal seafloor platform in the Canadian High Arctic (69˚ N) at Cambridge Bay, Nunavut. Both platforms streamed continuous data to a shore-based archive from Pro-Oceanus pCO2 sensors and other oceanographic instruments. The vertical profiler time series revealed substantial intrusions of corrosive (high CO2/low O2), saltier, colder water masses during the summertime upwelling season and during winter-time reversals of along-slope currents. Step-wise profiles during the downcast provided the most reliable pCO2 data, permitting the sensor to equilibrate to the broad range of pCO2 concentrations encountered over the 400 metre depth interval. The Arctic pCO2 sensor was deployed in August 2015. Reversing seasonal trends in pCO2 and dissolved oxygen values can be related to the changing balance of photosynthesis and respiration under sea ice, as influenced by irradiance. Correlation of pCO2 and dissolved oxygen sensor data and the collection of calibration samples have permitted evaluation of sensor performance in relation to operational conditions encountered in vertical profiling and lengthy exposure to subzero seawater.

Exposure of sea otters and harlequin ducks in Prince William Sound, Alaska, USA, to shoreline oil residues 20 years after the Exxon Valdez oil spill.

PubMed

Neff, Jerry M; Page, David S; Boehm, Paul D

2011-03-01

We assessed whether sea otters and harlequin ducks in an area of western Prince William Sound, Alaska, USA (PWS), oiled by the 1989 Exxon Valdez oil spill (EVOS), are exposed to polycyclic aromatic hydrocarbons (PAH) from oil residues 20 years after the spill. Spilled oil has persisted in PWS for two decades as surface oil residues (SOR) and subsurface oil residues (SSOR) on the shore. The rare SOR are located primarily on the upper shore as inert, nonhazardous asphaltic deposits, and SSOR are confined to widely scattered locations as small patches under a boulder/cobble veneer, primarily on the middle and upper shore, in forms and locations that preclude physical contact by wildlife and diminish bioavailability. Sea otters and harlequin ducks consume benthic invertebrates that they collect by diving to the bottom in the intertidal and subtidal zones. Sea otters also dig intertidal and subtidal pits in search of clams. The three plausible exposure pathways are through the water, in oil-contaminated prey, or by direct contact with SSOR during foraging. Concentrations of PAH in near-shore water off oiled shores in 2002 to 2005 were at background levels (<0.05 ng/L). Median concentrations of PAH in five intertidal prey species on oiled shores in 2002 to 2008 range from 4.0 to 34 ng/g dry weight, indistinguishable from background concentrations. Subsurface oil residues are restricted to locations on the shore and substrate types, where large clams do not occur and where sea otters do not dig foraging pits. Therefore, that sea otters and harlequin ducks continue to be exposed to environmentally significant amounts of PAH from EVOS 20 years after the spill is not plausible. Copyright © 2010 SETAC.

Physiological responses and scope for growth upon medium-term exposure to the combined effects of ocean acidification and temperature in a subtidal scavenger Nassarius conoidalis.

PubMed

Zhang, Haoyu; Shin, Paul K S; Cheung, S G

2015-05-01

Physiological responses (ingestion rate, absorption rate and efficiency, respiration, rate, excretion rate) and scope for growth of a subtidal scavenging gastropod Nassarius conoidalis under the combined effects of ocean acidification (pCO2 levels: 380, 950, 1250 μatm) and temperature (15, 30 °C) were investigated for 31 days. There was a significant reduction in all the physiological rates and scope for growth following short-term exposure (1-3 days) to elevated pCO2 except absorption efficiency at 15 °C and 30 °C, and respiration rate and excretion rate at 15 °C. The percentage change in the physiological rates ranged from 0% to 90% at 15 °C and from 0% to 73% at 30 °C when pCO2 was increased from 380 μatm to 1250 μatm. The effect of pCO2 on the physiological rates was enhanced at high temperature for ingestion, absorption, respiration and excretion. When the exposure period was extended to 31 days, the effect of pCO2 was significant on the ingestion rate only. All the physiological rates remained unchanged when temperature increased from 24 °C to 30 °C but the rates at 15 °C were significantly lower, irrespective of the duration of exposure. Our data suggested that a medium-term exposure to ocean acidification has no effect on the energetics of N. conoidalis. Nevertheless, the situation may be complicated by a longer term of exposure and/or a reduction in salinity in a warming world. Copyright © 2015 Elsevier Ltd. All rights reserved.

The Role of Environmental Forcing in Controlling Water Retention Gyres in Subsystems of Narragansett Bay

NASA Astrophysics Data System (ADS)

Balt, C.; Kincaid, C. R.; Ullman, D. S.

2010-12-01

Greenwich Bay and the Providence River represent two subsystems of the Narragansett Bay (RI) estuary with chronic water quality problems. Both underway and moored Acoustic Doppler Current Profiler (ADCP) observations have shown the presence of large-scale, subtidal gyres within these subsystems. Prior numerical models of Narragansett Bay, developed using the Regional Ocean Modeling System (ROMS), indicate that prevailing summer sea breeze conditions are favorable to the evolution of stable circulation gyres, which increase retention times within each subsystem. Fluid dynamics laboratory models of the Providence River, conducted in the Geophysical Fluid Dynamics Laboratory of the Research School of Earth Sciences (Australian National University), reproduce gyres that match first order features of the ADCP data. These laboratory models also reveal details of small-scale eddies along the edges of the retention gyre. We report results from spatially and temporally detailed current meter deployments (using SeaHorse Tilt Current Meters) in both subsystems, which reveal details on the growth and decay of gyres under various spring-summer forcing conditions. In particular, current meters were deployed during the severe flooding events in the Narragansett Bay watershed during March, 2010. A combination of current meter data and high-resolution ROMS modeling is used to show how gyres effectively limit subtidal exchange from the Providence River and Greenwich Bay and to understand the forcing conditions that favor efficient flushing. The residence times of stable gyres within these regions can be an order of magnitude larger than values predicted by fraction of water methods. ROMS modeling is employed to characterize gyre energy, stability, and flushing rates for a wide range of seasonal, wind and runoff scenarios.

The colonial ascidian Didemnum sp. A: current distribution, basic biology and potential threat to marine communities of the northeast and west coasts of North America

USGS Publications Warehouse

Bullard, S.G.; Lambert, G.; Carman, M.R.; Byrnes, J.; Whitlatch, R.B.; Ruiz, G.; Miller, R.J.; Harris, L.; Valentine, P.C.; Collie, J.S.; Pederson, J.; McNaught, D.C.; Cohen, A.N.; Asch, R.G.; Dijkstra, J.; Heinonen, K.

2007-01-01

Didemnum sp. A is a colonial ascidian with rapidly expanding populations on the east and west coasts of North America. The origin of Didemum sp. A is unknown. Populations were first observed on the northeast coast of the U.S. in the late 1980s and on the west coast during the 1990s. It is currently undergoing a massive population explosion and is now a dominant member of many subtidal communities on both coasts. To determine Didemnum sp. A's current distribution, we conducted surveys from Maine to Virginia on the east coast and from British Columbia to southern California on the west coast of the U.S. between 1998 and 2005. In nearshore locations Didemnum sp. A currently ranges from Eastport, Maine to Shinnecock Bay, New York on the east coast. On the west coast it has been recorded from Humboldt Bay to Port San Luis in California, several sites in Puget Sound, Washington, including a heavily fouled mussel culture facility, and several sites in southwestern British Columbia on and adjacent to oyster and mussel farms. The species also occurs at deeper subtidal sites (up to 81 m) off New England, including Georges, Stellwagen and Tillies Banks. On Georges Bank numerous sites within a 230 km2 area are 50–90% covered by Didemnum sp. A; large colonies cement the pebble gravel into nearly solid mats that may smother infaunal organisms. These observations suggest that Didemnum sp. A has the potential to alter marine communities and affect economically important activities such as fishing and aquaculture.

Keeping Pace with Climate Change: Habitat Protection in the Face of Uncertainty

NASA Astrophysics Data System (ADS)

Flitcroft, R. L.; Burnett, K.; Giannico, G.

2014-12-01

Estuaries provide critical habitat for many economically and culturally important species. In the Pacific Northwest, intertidal and subtidal areas provide critical habitat for production of native and commercial oysters (Olympia oyster Ostrea lurida and Pacific oyster Crassostrea gigas, respectively) that in turn provide refuge and rearing habitat for Dungeness Crab, Metacarcinus magister. Environments ranging from subtidal through freshwater zones provide nursery areas for juvenile salmonids at different development stages in their life history. Most Oregon estuaries have been significantly altered by humans over the past century, reducing the quantity and diversity of available habitats. Management agencies have responded with projects to restore and enhance estuarine habitats. Unfortunately, future climate change and sea-level rise could render many current restoration projects ineffective over time. Planning for habitat restoration that keeps pace with climate change will be critical to the sustainable production of seafood and maintenance of ecosystem function. However, land managers and citizens lack the spatially-explicit data needed to incorporate the potential effects of climate change and sea-level rise into planning for habitat improvement projects in estuarine areas. To meet this need, we developed simple models using LiDAR to characterize the geomorphologies of multiple Oregon estuaries. We were able to map the margin of current mean high tide, and contour intervals associated with different potential increases in mean high tide. Because our analysis relied on digital data, we compared three types of digital data in one estuary to assess the utility of different data sets in predicting changes in estuary shape. For each estuary, we assessed changes in the amount and complexity of edge habitats. The simple modeling approach we applied can also be used to identify areas that may be most amenable to pre-emptive restoration actions to mitigate or enhance habitats under future climatic conditions.

Experimental demonstration of a trophic cascade in the Galápagos rocky subtidal: Effects of consumer identity and behavior.

PubMed

Witman, Jon D; Smith, Franz; Novak, Mark

2017-01-01

In diverse tropical webs, trophic cascades are presumed to be rare, as species interactions may dampen top-down control and reduce their prevalence. To test this hypothesis, we used an open experimental design in the Galápagos rocky subtidal that enabled a diverse guild of fish species, in the presence of each other and top predators (sea lions and sharks), to attack two species of sea urchins grazing on benthic algae. Time-lapse photography of experiments on natural and experimental substrates revealed strong species identity effects: only two predator species-blunthead triggerfish (Pseudobalistes naufragium) and finescale triggerfish (Balistes polylepis)-drove a diurnal trophic cascade extending to algae, and they preferred large pencil urchins (Eucidaris galapagensis) over green urchins (Lytechinus semituberculatus). Triggerfish predation effects were strong, causing a 24-fold reduction of pencil urchin densities during the initial 21 hours of a trophic cascade experiment. A trophic cascade was demonstrated for pencil urchins, but not for green urchins, by significantly higher percent cover of urchin-grazed algae in cages that excluded predatory fish than in predator access (fence) treatments. Pencil urchins were more abundant at night when triggerfish were absent, suggesting that this species persists by exploiting a nocturnal predation refuge. Time-series of pencil urchin survivorship further demonstrated per capita interference effects of hogfish and top predators. These interference effects respectively weakened and extended the trophic cascade to a fourth trophic level through behavioral modifications of the triggerfish-urchin interaction. We conclude that interference behaviors capable of modifying interaction strength warrant greater attention as mechanisms for altering top-down control, particularly in speciose food webs.

Depositional facies and porosity development at Coon Creek Field (Newman [open quotes]Big Lime[close quotes]), Leslie County, Kentucky

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moshier, S.O.; Stamper, M.E.

1994-08-01

Coon Creek field is a significant petroleum reservoir in the [open quotes]Big Lime[close quotes], Middle to Upper Mississippian Newman equivalent, in southeastern Kentucky. Initial production from select wells has exceeded 600 bbl of oil/day at drilling depths averaging 915 m (3300 ft). Facies patterns, dolomitization, porosity, and structure in this carbonate reservoir have been delineated by geophysical logs, subsurface mapping, and examination of cores and cuttings. The reservoir is set within a localized paleotopographic low on the unconformable surface of the underlying siliciclastic Borden Group; the Borden surface can express rapid relief of over a 10% grade within less thanmore » 300 m. Transgression across the exposed Borden surface resulted in the deposition of a complex system of carbonates lithofacies. Crinoidal dolostones, representing shallow subtidal skeletal bars and banks, form the basal Big Lime (1.5-6 m thick). They are overlain by a typical facies (30 m thick) of bryozoan grainstones/packstones, crinoid grainstones, and mixed skeletal wakestones/mudstones. The rybryozoanacies are characterized by unfragmented fenestrates cemented by radiaxial-fibrous calcite. Stratigraphic distributions indicate the bryozoan facies were broad buildups with crinoidal flank and cap deposits and muddy skeletal off-mount facies, similar to deeper water Waulsortian mounds in other basins. Pellet and ooid grainstones represent moderate- to high-energy subtidal shoal deposits that covered the mound complex. Hydrocarbon production is restricted in the field to the crinoid-bryozoan facies complex within the basal 30 m. Reservoir porosity and permeability have been enhanced by selective dolomitization of grainstones and fracturing related to postdepositional reactivation of basement faults.« less

Trophic ecology of Atlantic seabob shrimp Xiphopenaeus kroyeri: Intertidal benthic microalgae support the subtidal food web off Suriname

NASA Astrophysics Data System (ADS)

Willems, Tomas; De Backer, Annelies; Kerkhove, Thomas; Dakriet, Nyasha Nanseerà; De Troch, Marleen; Vincx, Magda; Hostens, Kris

2016-12-01

A combination of stomach content analyses and dual stable isotope analyses was used to reveal the trophic ecology of Atlantic seabob shrimp Xiphopenaeus kroyeri off the coast of Suriname. This coastal penaeid shrimp species has a rather omnivorous diet, feeding opportunistically on both animal prey and primary food sources. The species is a predator of hyperbenthic crustaceans, including copepods, amphipods and the luciferid shrimp Lucifer faxoni, which are mainly preyed upon during daytime, when these prey typically reside near the seabed. Benthic microalgae (BM) from intertidal mudflats and offshore sedimentary organic matter (SOM) were important primary food sources. Due to their depleted 13C values, coastal sedimentary and suspended organic matter, and carbon from riverine and mangrove-derived detritus were not incorporated by X. kroyeri. An ontogenetic diet shift was observed from postlavae to juveniles and adults. Adult X. kroyeri were located higher in the food chain, mainly preying on larger benthic organisms. Intertidal BM were an important food source for all life stages of X. kroyeri, contributing up to 64% to the overall diet based on a Bayesian mixing model. Because X. kroyeri is the main epibenthic organism found at high densities in nearshore waters up to 30 m depth, the species plays a crucial role in transferring energy from low trophic level prey and primary food sources up to higher levels in the food chain. Our results indicate that primary production on intertidal mudflats, through BM, forms an important energy source for the subtidal turbid-water food web in muddy tropical coasts. Conservation of intertidal areas and their associated mangrove systems will therefore likely benefit coastal shrimp production and fisheries in tropical ecosystems.

Experimental demonstration of a trophic cascade in the Galápagos rocky subtidal: Effects of consumer identity and behavior

PubMed Central

Witman, Jon D.; Smith, Franz; Novak, Mark

2017-01-01

In diverse tropical webs, trophic cascades are presumed to be rare, as species interactions may dampen top-down control and reduce their prevalence. To test this hypothesis, we used an open experimental design in the Galápagos rocky subtidal that enabled a diverse guild of fish species, in the presence of each other and top predators (sea lions and sharks), to attack two species of sea urchins grazing on benthic algae. Time-lapse photography of experiments on natural and experimental substrates revealed strong species identity effects: only two predator species–blunthead triggerfish (Pseudobalistes naufragium) and finescale triggerfish (Balistes polylepis)–drove a diurnal trophic cascade extending to algae, and they preferred large pencil urchins (Eucidaris galapagensis) over green urchins (Lytechinus semituberculatus). Triggerfish predation effects were strong, causing a 24-fold reduction of pencil urchin densities during the initial 21 hours of a trophic cascade experiment. A trophic cascade was demonstrated for pencil urchins, but not for green urchins, by significantly higher percent cover of urchin-grazed algae in cages that excluded predatory fish than in predator access (fence) treatments. Pencil urchins were more abundant at night when triggerfish were absent, suggesting that this species persists by exploiting a nocturnal predation refuge. Time-series of pencil urchin survivorship further demonstrated per capita interference effects of hogfish and top predators. These interference effects respectively weakened and extended the trophic cascade to a fourth trophic level through behavioral modifications of the triggerfish-urchin interaction. We conclude that interference behaviors capable of modifying interaction strength warrant greater attention as mechanisms for altering top-down control, particularly in speciose food webs. PMID:28430794

[Effects of sediment on the early settlement stage of Sargassum horneri on rocky subtidal reefs].

PubMed

Bi, Yuan-Xin; Zhang, Shou-Yu; Wu, Zu-Li

2013-05-01

By using sediment trap and suction pump to measure the relative sediment levels across different sites and water depths, and through the in situ measurements of Sargassum horneri density, this paper assessed the relationships between the distribution of S. horneri and the sediment levels and wave exposure on the rocky subtidal platforms around Gouqi Island, China. The laboratory-based experiments were also conducted to test the effects of different sediment levels on the attachment of S. horneri zygote and the survival rate of S. horneri germling after the attachment. S. horneri predominated at the sites with lesser sediment and wave exposure, but less distributed in the sites with high level sediment and wave-exposure. At different water depths, the distribution of S. horneri was negatively correlated with the amount of sediment. A medium dusting (dry mass 10.47 mg x cm(-2), approximate 0.543 mm deep) of sediment on the plate reduced the percentage of S. horneri zygotes attached to the substratum by 4.4%, and a heavy dusting (dry mass 13.96 mg x cm(-2), approximate 0.724 mm deep) of sediment on the plate completely prevented the attachment. One week after the settlement of the zygotes, there were 24% of the germlings still survived when the dry mass sediment coverage was 13.96 mg x cm(-2). However, when the dry mass sediment coverage was up to 34.9 mg x cm(-2) (approximate 1.81 mm deep), 100% of the germlings died. Overall, the distribution of S. horneri was not only related to sediment level, but also restricted by wave exposure to some extent. Sediment level was a critical factor affecting the distribution of S. horneri, particularly at its zygote attachment stage.

Open-ocean boundary conditions from interior data: Local and remote forcing of Massachusetts Bay

USGS Publications Warehouse

Bogden, P.S.; Malanotte-Rizzoli, P.; Signell, R.

1996-01-01

Massachusetts and Cape Cod Bays form a semienclosed coastal basin that opens onto the much larger Gulf of Maine. Subtidal circulation in the bay is driven by local winds and remotely driven flows from the gulf. The local-wind forced flow is estimated with a regional shallow water model driven by wind measurements. The model uses a gravity wave radiation condition along the open-ocean boundary. Results compare reasonably well with observed currents near the coast. In some offshore regions however, modeled flows are an order of magnitude less energetic than the data. Strong flows are observed even during periods of weak local wind forcing. Poor model-data comparisons are attributable, at least in part, to open-ocean boundary conditions that neglect the effects of remote forcing. Velocity measurements from within Massachusetts Bay are used to estimate the remotely forced component of the flow. The data are combined with shallow water dynamics in an inverse-model formulation that follows the theory of Bennett and McIntosh [1982], who considered tides. We extend their analysis to consider the subtidal response to transient forcing. The inverse model adjusts the a priori open-ocean boundary condition, thereby minimizing a combined measure of model-data misfit and boundary condition adjustment. A "consistency criterion" determines the optimal trade-off between the two. The criterion is based on a measure of plausibility for the inverse solution. The "consistent" inverse solution reproduces 56% of the average squared variation in the data. The local-wind-driven flow alone accounts for half of the model skill. The other half is attributable to remotely forced flows from the Gulf of Maine. The unexplained 44% comes from measurement errors and model errors that are not accounted for in the analysis. 

Modifications to the bottomless lift net for sampling nekton in tidal mangrove forests

USGS Publications Warehouse

McIvor, C.C.; Silverman, N.L.

2010-01-01

Sampling fishes in vegetated intertidal wetlands is logistically challenging. We modified the 2 ?? 3-m2 bottomless lift net developed for sampling nekton (fish and decapod crustaceans) on the surface of salt marshes for use in tidal mangrove forests with a woody (as opposed to herbaceous) underground root system. As originally designed (Rozas, Mar Ecol Prog Ser 89:287-292, 1992), the lift net was buried directly in the marsh substrate. The net was raised at slack high tide thereby encircling nekton within the enclosed area. A chain-line on the net bottom prevented escape under the net once deployed. However, when we used this same design in tidal mangrove forests, the extensive woody roots and occasional slumping sediments resulted in uneven trenches that could not be cleared effectively during sample recovery. We made 3 modifications to the original net design: (i) lined the peat trenches with aluminum channels of uniform width and depth; (ii) replaced the previous chain-line with Velcro closures that directly attached the net to the inner face of the outer wall of the aluminum channel; and (iii) removed the subtidal pan previously used for concentrating the enclosed nekton at low tide, and filled in those depressions with on-site peat. In the modified version, the aluminum trench became the only subtidal refuge available to nekton, and it was from here that we collected the sample after the forest drained. These modifications permitted high clearing efficiency (93-100%) of fin-clipped individuals of two common species of estuarine resident fishes, Kryptolebias marmoratus (mangrove rivulus) and Bathygobius soporator (frillfin goby). Additionally, the density estimates of grass shrimp (Palaemonetes spp.) increased 10-fold post-modification. ?? 2010 US Government.

High-resolution geophysical data from the sea floor surrounding the Western Elizabeth Islands, Massachusetts

USGS Publications Warehouse

Pendleton, Elizabeth A.; Twichell, David C.; Foster, David S.; Worley, Charles R.; Irwin, Barry J.; Danforth, William W.

2011-01-01

Geophysical and geospatial data were collected in the nearshore area surrounding the western Elizabeth Islands, Massachusetts on the U.S. Geological Survey research vessel Rafael during September 2010 in a collaborative effort between the U.S. Geological Survey and the Massachusetts, Office of Coastal Zone Management. This report describes the results of the short-term goals of this collaborative effort, which were to map the geology of the inner shelf zone of the western Elizabeth Islands and study the geologic processes that have contributed to its evolution. Data collected during the survey include: Bathymetric and sidescan-sonar data, chirp seismic-reflection data , sound velocity profiles, and navigation data. The long-term goals of this project are to provide high-resolution geophysical data that will support research on the influence of sea-level change and sediment supply on coastal evolution and inventory subtidal marine habitat type and distribution within the coastal zone of Massachusetts.

A new species of the ghost shrimp genus Lepidophthalmus (Crustacea: Decapoda: Axiidea) from the southwestern Gulf of Mexico.

PubMed

Felder, Darryl L

2015-07-13

A new species of Lepidophthalmus lacking a ventral median sclerite on the second abdominal somite is described from coastal waters of the southwestern Gulf of Mexico. Lepidophthalmus statoni sp. nov., originally recognized only as a unique population in allozyme studies, is sympatric with the ventrally plated species Lepidophthalmus manningi Felder & Staton, 2000, but more closely resembles Lepidophthalmus louisianensis (Schmitt, 1935) from the northern and northwestern Gulf of Mexico. Apparently restricted to intertidal and shallow subtidal tropical waters, the new species is known to range from western Campeche to middle-upper reaches of Veracruz, Mexico. As many members of the genus, it commonly inhabits euryhaline inlets, estuaries, and protected shorelines, including richly organic muddy to clayey sands and sandy muds adjacent to shoreline vegetation. Coloration is documented and discussed as a tool to facilitate field identifications, as are morphological characters.

Characterisation of the biofouling community on a floating wave energy device.

PubMed

Nall, Christopher R; Schläppy, Marie-Lise; Guerin, Andrew J

2017-05-01

Wave energy devices are novel structures in the marine environment and, as such, provide a unique habitat for biofouling organisms. In this study, destructive scrape samples and photoquadrats were used to characterise the temperate epibenthic community present on prototypes of the Pelamis wave energy converter. The biofouling observed was extensive and diverse with 115 taxa recorded including four non-native species. Vertical zonation was identified on the sides of the device, with an algae-dominated shallow subtidal area and a deeper area characterised by a high proportion of suspension-feeding invertebrates. Differences in species composition and biomass were also observed between devices, along the length of the device and between sampling dates. This research provides an insight into the variation of biofouling assemblages on a wave energy device as well as the potential technical and ecological implications associated with biofouling on marine renewable energy structures.

The role of certain infauna and vascular plants in the mediation of redox reactions in marine sediments

NASA Technical Reports Server (NTRS)

Hines, Mark E.

1992-01-01

The mechanisms by which certain animals and plants affect redox processes in sediments was examined by studying three environments: (1) subtidal sediments dominated by the deposit-feeding polychaete Heteromastus filiformis; (2) a saltmarsh inhabited by the tall form of Spartina alterniflora; and (3) tropical carbonate sediments inhabited by three species of seagrasses. S-35-sulfide production rates were compared to pool sizes of dissolved sulfide and dissolved iron. In all of the sediments studied, rates of sulfide reduction were enhanced by macroorganisms while the rate of turnover of dissolved sulfide increased. The polychaete enhanced microbial activity and redox cycling primarily by subducting particles of organic matter and oxidized iron during sediment reworking. The Spartina species enhanced anaerobic activity by transporting primarily dissolved organic matter and oxidants. Although the final result of both animal and plant activities was the enhancement of sub-surface cycling of sulfur and iron, decreased dissolved sulfide and increased dissolved iron concentrations, the mechanisms which produced these results differed dramatically.

Australian shellfish ecosystems: Past distribution, current status and future direction

PubMed Central

Gillies, Chris L.; McLeod, Ian M.; Alleway, Heidi K.; Cook, Peter; Crawford, Christine; Creighton, Colin; Diggles, Ben; Ford, John; Hamer, Paul; Heller-Wagner, Gideon; Lebrault, Emma; Le Port, Agnès; Russell, Kylie; Sheaves, Marcus; Warnock, Bryn

2018-01-01

We review the status of marine shellfish ecosystems formed primarily by bivalves in Australia, including: identifying ecosystem-forming species, assessing their historical and current extent, causes for decline and past and present management. Fourteen species of bivalves were identified as developing complex, three-dimensional reef or bed ecosystems in intertidal and subtidal areas across tropical, subtropical and temperate Australia. A dramatic decline in the extent and condition of Australia’s two most common shellfish ecosystems, developed by Saccostrea glomerata and Ostrea angasi oysters, occurred during the mid-1800s to early 1900s in concurrence with extensive harvesting for food and lime production, ecosystem modification, disease outbreaks and a decline in water quality. Out of 118 historical locations containing O. angasi-developed ecosystems, only one location still contains the ecosystem whilst only six locations are known to still contain S. glomerata-developed ecosystems out of 60 historical locations. Ecosystems developed by the introduced oyster Crasostrea gigas are likely to be increasing in extent, whilst data on the remaining 11 ecosystem-forming species are limited, preventing a detailed assessment of their current ecosystem-forming status. Our analysis identifies that current knowledge on extent, physical characteristics, biodiversity and ecosystem services of Australian shellfish ecosystems is extremely limited. Despite the limited information on shellfish ecosystems, a number of restoration projects have recently been initiated across Australia and we propose a number of existing government policies and conservation mechanisms, if enacted, would readily serve to support the future conservation and recovery of Australia’s shellfish ecosystems. PMID:29444143

Evidence for a trophic cascade on rocky reefs following sea star mass mortality in British Columbia

PubMed Central

Cloutier, Ryan N.; Côté, Isabelle M.

2016-01-01

Echinoderm population collapses, driven by disease outbreaks and climatic events, may be important drivers of population dynamics, ecological shifts and biodiversity. The northeast Pacific recently experienced a mass mortality of sea stars. In Howe Sound, British Columbia, the sunflower star Pycnopodia helianthoides—a previously abundant predator of bottom-dwelling invertebrates—began to show signs of a wasting syndrome in early September 2013, and dense aggregations disappeared from many sites in a matter of weeks. Here, we assess changes in subtidal community composition by comparing the abundance of fish, invertebrates and macroalgae at 20 sites in Howe Sound before and after the 2013 sea star mortality to evaluate evidence for a trophic cascade. We observed changes in the abundance of several species after the sea star mortality, most notably a four-fold increase in the number of green sea urchins, Strongylocentrotus droebachiensis, and a significant decline in kelp cover, which are together consistent with a trophic cascade. Qualitative data on the abundance of sunflower stars and green urchins from a citizen science database show that the patterns of echinoderm abundance detected at our study sites reflected wider local trends. The trophic cascade evident at the scale of Howe Sound was observed at half of the study sites. It remains unclear whether the urchin response was triggered directly, via a reduction in urchin mortality, or indirectly, via a shift in urchin distribution into areas previously occupied by the predatory sea stars. Understanding the ecological implications of sudden and extreme population declines may further elucidate the role of echinoderms in temperate seas, and provide insight into the resilience of marine ecosystems to biological disturbances. PMID:27168988

Hurricane-induced Sediment Transport and Morphological Change in Jamaica Bay, New York

NASA Astrophysics Data System (ADS)

Hu, K.; Chen, Q. J.

2016-02-01

Jamaica Bay is located in Brooklyn and Queens, New York on the western end of the south shore of the Long Island land mass. It experienced a conversion of more than 60% of the vegetated salt-marsh islands to intertidal and subtidal mudflats. Hurricanes and nor'easters are among the important driving forces that reshape coastal landscape quickly and affect wetland sustainability. Wetland protection and restoration need a better understanding of hydrodynamics and sediment transport in this area, especially under extreme weather conditions. Hurricane Sandy, which made landfall along east coast on October 30, 2012, provides a critical opportunity for studying the impacts of hurricanes on sedimentation, erosion and morphological changes in Jamaica Bay and salt marsh islands. The Delft3D model suit was applied to model hydrodynamics and sediment transport in Jamaica Bay and salt marsh islands. Three domains were set up for nesting computation. The local domain covering the bay and salt marshes has a resolution of 10 m. The wave module was online coupled with the flow module. Vegetation effects were considered as a large number of rigid cylinders by a sub-module in Delft3D. Parameters in sediment transport and morphological change were carefully chosen and calibrated. Prior- and post-Sandy Surface Elevation Table (SET)/accretion data including mark horizon (short-term) and 137Cs and 210Pb (long-term) at salt marsh islands in Jamaica Bay were used for model validation. Model results indicate that waves played an important role in hurricane-induced morphological change in Jamaica Bay and wetlands. In addition, numerical experiments were carried out to investigate the impacts of hypothetic hurricanes. This study has been supported by the U.S. Geological Survey Hurricane Sandy Disaster Recovery Act Funds.

How a collaborative integrated taxonomic effort has trained new spongiologists and improved knowledge of Martinique Island (French Antilles, eastern Caribbean Sea) marine biodiversity

PubMed Central

2017-01-01

Although sponges are important components of benthic ecosystems of the Caribbean Sea, their diversity remained poorly investigated in the Lesser Antilles. By organizing a training course in Martinique, we wanted both to promote taxonomy and to provide a first inventory of the sponge diversity on this island. The course was like a naturalist expedition, with a field laboratory and a classroom nearby. Early-career scientists and environmental managers were trained in sponge taxonomy. We gathered unpublished data and conducted an inventory at 13 coastal sites. We explored only shallow water habitats (0–30 m), such as mangroves, reefs or rocky bottoms and underwater caves. According to this study, the sponge fauna of Martinique is currently represented by a minimum of 191 species, 134 of which we could assign species names. One third of the remaining non-identified sponge species we consider to be new to science. Martinique appears very remarkable because of its littoral marine fauna harboring sponge aggregations with high biomass and species diversity dominating over coral species. In mangroves, sponges cover about 10% of the surface of subtidal roots. Several submarine caves are true reservoirs of hidden and insufficiently described sponge diversity. Thanks to this new collaborative effort, the Eastern Caribbean has gained a significant increase of knowledge, with sponge diversity of this area potentially representing 40% of the total in the Caribbean Sea. We thus demonstrated the importance of developing exploratory and educational research in areas historically devoid of biodiversity inventories and systematics studies. Finally, we believe in the necessity to consider not only the number of species but their distribution in space to evaluate their putative contribution to ecosystem services and our willingness to preserve them. PMID:28329020

Key parameters of the sediment surface morphodynamics in an estuary - An assessment of model solutions

NASA Astrophysics Data System (ADS)

Sampath, D. M. R.; Boski, T.

2018-05-01

Large-scale geomorphological evolution of an estuarine system was simulated by means of a hybrid estuarine sedimentation model (HESM) applied to the Guadiana Estuary, in Southwest Iberia. The model simulates the decadal-scale morphodynamics of the system under environmental forcing, using a set of analytical solutions to simplified equations of tidal wave propagation in shallow waters, constrained by empirical knowledge of estuarine sedimentary dynamics and topography. The key controlling parameters of the model are bed friction (f), current velocity power of the erosion rate function (N), and sea-level rise rate. An assessment of sensitivity of the simulated sediment surface elevation (SSE) change to these controlling parameters was performed. The model predicted the spatial differentiation of accretion and erosion, the latter especially marked in the mudflats within mean sea level and low tide level and accretion was mainly in a subtidal channel. The average SSE change mutually depended on both the friction coefficient and power of the current velocity. Analysis of the average annual SSE change suggests that the state of intertidal and subtidal compartments of the estuarine system vary differently according to the dominant processes (erosion and accretion). As the Guadiana estuarine system shows dominant erosional behaviour in the context of sea-level rise and sediment supply reduction after the closure of the Alqueva Dam, the most plausible sets of parameter values for the Guadiana Estuary are N = 1.8 and f = 0.8f0, or N = 2 and f = f0, where f0 is the empirically estimated value. For these sets of parameter values, the relative errors in SSE change did not exceed ±20% in 73% of simulation cells in the studied area. Such a limit of accuracy can be acceptable for an idealized modelling of coastal evolution in response to uncertain sea-level rise scenarios in the context of reduced sediment supply due to flow regulation. Therefore, the idealized but cost-effective HESM model will be suitable for estimating the morphological impacts of sea-level rise on estuarine systems on a decadal timescale.

Temporal genetic structure in a poecilogonous polychaete: the interplay of developmental mode and environmental stochasticity

PubMed Central

2014-01-01

Background Temporal variation in the genetic structure of populations can be caused by multiple factors, including natural selection, stochastic environmental variation, migration, or genetic drift. In benthic marine species, the developmental mode of larvae may indicate a possibility for temporal genetic variation: species with dispersive planktonic larvae are expected to be more likely to show temporal genetic variation than species with benthic or brooded non-dispersive larvae, due to differences in larval mortality and dispersal ability. We examined temporal genetic structure in populations of Pygospio elegans, a poecilogonous polychaete with within-species variation in developmental mode. P. elegans produces either planktonic, benthic, or intermediate larvae, varying both among and within populations, providing a within-species test of the generality of a relationship between temporal genetic variation and larval developmental mode. Results In contrast to our expectations, our microsatellite analyses of P. elegans revealed temporal genetic stability in the UK population with planktonic larvae, whereas there was variation indicative of drift in temporal samples of the populations from the Baltic Sea, which have predominantly benthic and intermediate larvae. We also detected temporal variation in relatedness within these populations. A large temporal shift in genetic structure was detected in a population from the Netherlands, having multiple developmental modes. This shift could have been caused by local extiction due to extreme environmental conditions and (re)colonization by planktonic larvae from neighboring populations. Conclusions In our study of P. elegans, temporal genetic variation appears to be due to not only larval developmental mode, but also the stochastic environment of adults. Large temporal genetic shifts may be more likely in marine intertidal habitats (e.g. North Sea and Wadden Sea) which are more prone to environmental stochasticity than the sub-tidal Baltic habitats. Sub-tidal and/or brackish (less saline) habitats may support smaller P. elegans populations and these may be more susceptible to the effects of random genetic drift. Moreover, higher frequencies of asexual reproduction and the benthic larval developmental mode in these populations leads to higher relatedness and contributes to drift. Our results indicate that a general relationship between larval developmental mode and temporal genetic variation may not exist. PMID:24447386

Temporal genetic structure in a poecilogonous polychaete: the interplay of developmental mode and environmental stochasticity.

PubMed

Kesäniemi, Jenni E; Mustonen, Marina; Boström, Christoffer; Hansen, Benni W; Knott, K Emily

2014-01-22

Temporal variation in the genetic structure of populations can be caused by multiple factors, including natural selection, stochastic environmental variation, migration, or genetic drift. In benthic marine species, the developmental mode of larvae may indicate a possibility for temporal genetic variation: species with dispersive planktonic larvae are expected to be more likely to show temporal genetic variation than species with benthic or brooded non-dispersive larvae, due to differences in larval mortality and dispersal ability. We examined temporal genetic structure in populations of Pygospio elegans, a poecilogonous polychaete with within-species variation in developmental mode. P. elegans produces either planktonic, benthic, or intermediate larvae, varying both among and within populations, providing a within-species test of the generality of a relationship between temporal genetic variation and larval developmental mode. In contrast to our expectations, our microsatellite analyses of P. elegans revealed temporal genetic stability in the UK population with planktonic larvae, whereas there was variation indicative of drift in temporal samples of the populations from the Baltic Sea, which have predominantly benthic and intermediate larvae. We also detected temporal variation in relatedness within these populations. A large temporal shift in genetic structure was detected in a population from the Netherlands, having multiple developmental modes. This shift could have been caused by local extiction due to extreme environmental conditions and (re)colonization by planktonic larvae from neighboring populations. In our study of P. elegans, temporal genetic variation appears to be due to not only larval developmental mode, but also the stochastic environment of adults. Large temporal genetic shifts may be more likely in marine intertidal habitats (e.g. North Sea and Wadden Sea) which are more prone to environmental stochasticity than the sub-tidal Baltic habitats. Sub-tidal and/or brackish (less saline) habitats may support smaller P. elegans populations and these may be more susceptible to the effects of random genetic drift. Moreover, higher frequencies of asexual reproduction and the benthic larval developmental mode in these populations leads to higher relatedness and contributes to drift. Our results indicate that a general relationship between larval developmental mode and temporal genetic variation may not exist.

Morpho-structural and ecological features of a shallow vermetid bioconstruction in the Tyrrhenian Sea (Mediterranean Sea, Italy)

NASA Astrophysics Data System (ADS)

Donnarumma, Luigia; Sandulli, Roberto; Appolloni, Luca; Di Stefano, Floriana; Russo, Giovanni Fulvio

2018-01-01

Biogenic formations, built up by the sessile and gregarious vermetid gastropod Dendropoma cristatum, were studied from June to October 2014 along the rocky shores of Licosa islet (Gulf of Salerno, Tyrrhenian Sea), where they build up the northernmost reefs in the Mediterranean Sea in order to shed light on possible latitudinal changes. The islet has two differently exposed sides, with three types of vermetid formations: the first consists in a thin layer composed by vermetid gastropods and the coralline alga N. brassica-florida, widespread only in the sheltered side of the islet; the second is represented by small isolated pillows (13.9 ± 5.64 cm), all around the islet at depth of more than fifteen centimetres; the third is a well-structured reef, characterized by a dense layer of mollusc shells that overgrow each other, only found in the exposed side of the islet. The vermetid reef was monitored in two sites with different substrates: ancient walls, made of calcareous lateritious material, and the flysch rocks, composed by siliceous turbiditic deposits. While no differences arise in gastropod density related to rock type (calcareous lateritious material versus siliceous turbiditic deposits), significant differences have been found along a vertical gradient, seeing density increases from the upper intertidal to the upper subtidal level. The associated algal cover seems to be inversely related to the vermetid density. In the upper intertidal, D. cristatum was almost completely covered (about 83%) by a thick layer of encrusting alga N. brassica-florida. In the lower intertidal the encrusting alga disappear but the shells of vermetid gastropods were remarkably colonized by the erected red algae of the "Laurencia complex" (70%) while in the upper subtidal, the vermetid shells were scarcely covered, mainly by other algal species (13%). By comparing present data with those of Sicilian reefs no evidences arise due to the different latitude. Innovative approaches (Remotely Piloted Aircraft Systems technology and fractal geometry) applied to these marine bioconstructions, resulted very effective in mapping and structuring the complexity of the reefs.

Revision of the genus Parasphaerolaimus (Nematoda: Sphaerolaimidae) with description of new species.

PubMed

Zograf, Julia K; Pavlyuk, Olga N; Trebukhova, Yulia A; Tu, Nguyen Dinh

2017-02-15

The family Sphaerolaimidae Filipjev, 1918 includes nematodes that are characterized by the finely striated cuticle, round amphids, broad buccal cavity with longitudinal ribs, and single anterior ovary in females. Parasphaerolaimus species from this family are found in intertidal and subtidal sediments and have also been reported from mangroves and estuaries. Parasphaerolaimus pilosus sp. n. is characterized by the moderately plump body, presence of lateral alae, long cervical setae, small amphids in males, and relatively short spicules. As a result of a comprehensive evaluation of species descriptions, eight species in the genus Parasphaerolaimus are recognized valid, and an identification key to species level is provided.

DOE Office of Scientific and Technical Information (OSTI.GOV)

O`Clair, C.E.; Short, J.W.; Rice, S.D.

To determine the distribution of oil in subtidal sediments after the Exxon Valdez oil spill we sampled sediments at six depths (0, 3, 6, 20, 40 and 100 m) at 53 locations in Prince William Sound and the northern Gulf of Alaska from 1989 to 1991. Results are based on 1278 sediment samples analyzed by gas chromatography/mass spectrometry. In 1989, the oil concentration was greatest in the Sound at 0 m. Outside the Sound, Exxon Valdez oil occurred at Chugach Bay, Hallo Bay, Katmai Bay, and Windy Bay in 1989. Hydrocarbons often matched Exxon Valdez oil less closely, oil wasmore » more patchily distributed, and the oil concentration decreased in sediments after 1989.« less

Molecular Ecological and Stable Isotopic Studies of Nitrogen Fixation in Modern Microbial Mats

NASA Technical Reports Server (NTRS)

Bebout, B. M.; Crumbliss, L. L.; DesMarais, D. J.; Hogan, M. E.; Omoregie, E.; Turk, K. A.; Zehr, J. P.

2003-01-01

Nitrogen is usually the element limiting biological productivity in the marine environment. Microbial mats, laminated microbial communities analogous to some of the oldest forms of life on Earth, are often the sites of high rates of N fixation (the energetically expensive conversion of atmospheric dinitrogen into a biologically useful form). The N fixing enzyme nitrogenase is generally considered to be of ancient origin, and is widely distributed throughout the Bacterial and Archaeal domains of life, indicating an important role for this process over evolutionary time. The stable isotopic signature of N fixation is purportedly recognizable in organic matter (ancient kerogens as well as present-day microbial mats) as a delta (15)N(sub organic) near zero. We studied two microbial mats exhibiting different rates of N fixation in order to better understand the impact of N fixation on the delta (15)N (sub organic) of the mats, as well as what organisms are important in this process. Mats dominated by the cyanobacterium Microcoleus chthonoplastes grow in permanently submerged hypersaline salterns, and exhibit low rates of N fixation, whereas mats dominated by the cyanobacterium Lyngbya spp grow in an intertidal area, and exhibit rates of N fixation an order of magnitude higher. To examine successional stages in mat growth, both developing and established mats at each location were sampled. PCR and RT-PCR based approaches were used to identify, respectively, the organisms containing nifH (one of the genes that encode nitrogenase) as well as those expressing nifH in these mats. Both mats exhibited a distinct diel cycle of N fixation, with highest rates occurring at night. The delta (15)N(sub organic) of the subtidal Microcoleus mats is near zero whereas the delta (15)N(sub organic) is slightly more positive (+ 2-3%), in the intertidal Lyngbya mats, an interesting difference in view of the fact that overall rates of activity in the intertidal mats are much higher that those in the submerged hypersaline mats. Developing mats in both the subtidal and intertidal locations had delta (15)N(sub organic) values very near those of the established mats. Further work is necessary in order to determine the importance of other transformations of nitrogen on the delta (15)N(sub organic) signature of the mats.

Contrasting sedimentation patterns in two semi-enclosed mesotidal bays along the west and south coasts of Korea controlled by their orientation to the regional monsoon climate

NASA Astrophysics Data System (ADS)

Hong, Seok Hwi; Chun, Seung Soo; Chang, Tae Soo; Jang, Dae Geon

2017-08-01

Sedimentation patterns of tidal flats along the Korean west coast have long been known to be largely controlled by the monsoon climate. On the other hand, much less is known about the effect of the monsoon on sedimentation in coastal embayments with mouths of different geographic orientations. Good examples are Hampyeong and Yeoja bays along the west and south coasts, respectively. Both have narrow entrances, but their mouths open toward the northwest and the south, respectively. With mean tidal ranges of 3.46 and 3.2 m, respectively, the two bays experience similar tidal regimes and are hence excellent candidates to compare the effect of different exposure to the same regional monsoon climate on their respective sediment distribution patterns. The winter monsoon, in particular, is characterized by strong northwesterly winds that directly impact the west coast, but blow offshore along the south coast. For the purpose of this study, surficial sediment samples were collected from intertidal and subtidal flats of the two bays, both in summer and winter. Grain-size analyses were carried out by sieving (sand fraction) and Sedigraph (mud fraction). In the case of Yeoja Bay, the sediments consist mostly of mud (mean grain sizes of 5.4 to 8.8 phi). Seasonal changes are very subtle, the sediments being slightly coarser in summer when silt-dominated sediments are supplied by two streams to the northern parts of the bay in response to heavy rainfall. With the exception of the deeper tidal channels, Yeoja Bay is characterized by a thick mud blanket the year round, which is modulated by processes associated with the summer monsoon that predominantly blows from the east. Textural parameters suggest severely restricted sediment mixing on the subtidal and intertidal flats, the overall low energy situation preventing sands from reaching the tidal flats. The sediments of Hampyeong Bay, by contrast, are characterized by a distinct shoreward fining trend. Mean grain sizes average around -2.2 phi at the mouth and 8.2 phi near the shore of the inner bay. The textural relationships suggest progressive mixing between two hydraulic populations, the overall higher energy situation allowing sands to be transported onto the tidal flats in winter. In addition, a clear seasonal signal indicating deposition in summer and erosion in winter is observed, the latter probably being controlled by waves generated by strong northwesterly winds of the winter monsoon. The contrasting energy regimes controlling sediment distribution in the two bays are particularly well reflected in ternary diagrams of sand/silt/clay ratios and bivariate plots of textural parameters. The results clearly demonstrate that tidal sedimentation along the west coast of Korea is controlled by the more energetic winter monsoon, whereas along the south coast it is modulated by the less energetic summer monsoon. As a consequence, distinct seasonal changes are particularly pronounced along the west coast, whereas these are more subtle along the south coast. The orientation of bay mouths relative to the direction of wind associated with the summer and winter monsoon is thus identified as the main reason for the completely different sedimentation patterns observed on the subtidal and intertidal flats of the two bays.

Textural and Carbon Isotopic Analyses of Modern Carbonate Microbialites: Possible Ancient and Martian Analogs

NASA Technical Reports Server (NTRS)

Thompson, Joel B.

1998-01-01

Many modem and ancient carbonate deposits around the world have been recognized as microbial buildups or microbialites. Ancient microbialite structures have been divided into two basic categories based on their internal fabric or texture. They include stromatolites which have a predominantly laminated internal fabric and thrombolites which have an open-porous clotted fabric, that lacks laminae. The origin of these two basic microbial fabrics is still being debated in the literature. Understanding the origin and the various microorganisms involved in forming these modem fabrics is the key to the interpretation of similar fabrics in ancient and possibly Martian rocks. Therefore, detailed studies are needed on the microbiological makeup and origin of the fabrics in modem microbialites. Such studies may serve as analogs for ancient and Martian microbialites in the future. The purpose of this study is to examine the textures and carbon isotopic signatures of the following modem microbialites from the Bahamas: 1) a modem subtidal microbialite from Iguana Cay, Bahamas and 2) a modem microbial mat (stromatolite) from a hypersaline pond on Lee Stocking Island, Bahamas.

North-Australian tropical seas circulation study

NASA Technical Reports Server (NTRS)

Burrage, Derek; Coleman, R.; Bode, L.; Inoue, M.

1991-01-01

This investigation is intended to fully address the stated objective of the TOPEX/POSEIDON mission (National Aeronautics and Space Administration, 1986). Hence, we intend to use TOPEX/POSEIDON altimetry data to study the large-scale circulation of the Coral Sea Basin and the Arafura Sea and the mass exchange between these and adjoining basins. We will obtain data from two such cruises in 1993 and 1994 and combine them with TOPEX/POSEIDON radar altimetry data to identify interannual and seasonal changes in: (1) the location of the major ocean currents and the South Equatorial Current bifurcation in the Coral Sea; (2) the source region of the South Tropical Counter Current (STCC); and (3) the water exchange between the Coral Sea and the adjoining seas. We will also estimate seasonal and interannual variations in the horizontal transport of mass and heat associated with near-surface geostrophic and wind-driven currents. In addition, the tidal components of the Coral Sea will be studied to provide a correction for altimetry subtidal sea level changes and to develop a regional numerical model for tidal forcing in the Great Barrier Reef (GBR) and Papua New Guinea Reef regions.

Individual marking of soft-bodied subtidal invertebrates in situ – A novel staining technique applied to the giant plumose anemone Metridium farcimen (Tilesius, 1809)

PubMed Central

Sebens, Kenneth P.

2017-01-01

The ability to recognize individuals and track growth over time is crucial to population dynamics research as well as studies of animal behavior. Invertebrates are particularly difficult to track as they often molt, have regenerative capabilities, or lack hard parts to attach markers. We tested, in laboratory and field studies, a new way of marking sea anemones (order Actiniaria) by injection of three vital stains (i.e., neutral red, methylene blue, and fluorescein). Neutral red and methylene blue did not affect growth or survival, but fluorescein was lethal at high concentrations. Marked individuals could be identified up to seven months after injection with neutral red, six weeks with methylene blue, and three days with low concentrations of fluorescein. Neutral red could be used for long-term monitoring of growth and survival in the field, and in combination with methylene blue could be used to mark individuals in distinguishable patterns for short-term studies such as examining predator-prey interactions, movement of individuals, and recruitment survival. PMID:29161292

California State Waters Map Series: Drakes Bay and vicinity, California

USGS Publications Warehouse

Watt, Janet T.; Dartnell, Peter; Golden, Nadine E.; Greene, H. Gary; Erdey, Mercedes D.; Cochrane, Guy R.; Johnson, Samuel Y.; Hartwell, Stephen R.; Kvitek, Rikk G.; Manson, Michael W.; Endris, Charles A.; Dieter, Bryan E.; Sliter, Ray W.; Krigsman, Lisa M.; Lowe, Erik N.; Chinn, John L.; Watt, Janet T.; Cochran, Susan A.

2015-01-01

Sediment transport in the map area largely is controlled by surface waves and tidal currents in the nearshore and, at depths greater than 20 to 30 m, by tidal and subtidal currents. In the map area, nearshore littoral drift of sand and coarse sediment is to the south, owing to the dominant west-northwest swell direction, and scour from large waves and tidal currents removes and redistributes sediment over large areas of the inner shelf. Tidal currents are particularly strong over the shelf in the map area, and they dominate the current regime in the nearshore. Further offshore, bottom currents generally flow to the northwest, distributing finer grained sediment accordingly.

Soft-sediment deformation structures from an ice-marginal storm-tide interactive system, Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India

NASA Astrophysics Data System (ADS)

Bhattacharya, H. N.; Bhattacharya, Biplab

2010-01-01

Permo-Carboniferous Talchir Formation, Talchir Coalbasin, India, records sedimentation during a phase of climatic amelioration in an ice-marginal storm-affected shelf. Evidences of subtidal processes are preserved only under thick mud drapes deposited during waning storm phases. Various soft-sediment deformation structures in some sandstone/siltstone-mudstone interbeds, like syn-sedimentary faults, deformed laminations, sand-silt flows, convolute laminations and various flame structures, suggest liquefaction and fluidization of the beds due to passage of syn-depositional seismic shocks. In the Late Paleozoic ice-marginal shelf, such earthquake tremors could be generated by crustal movements in response to glacioisostatic adjustments of the basin floor.

Further ecological and shoreline stability reconnaissance surveys of Back Island, Behm Canal, Southeast Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Young, J.S.; Strand, J.A.; Ecker, R.M.

1987-09-01

A diver reconnaissance of the intertidal and subtidal zones of Back Island was performed to catalog potentially vulnerable shellfish, other invertebrates, and marine plant resources occurring at three proposed alternate pier sites on the west side of Back Island. Additionally, a limited survey of terrestrial vegetation was conducted in the vicinity of one of the proposed alternate pier sites to describe the littoral community and to list the dominant plant species found there. Finally, a reconnaissance survey of the shoreline of Back Island was conducted to evaluate potential changes in shoreline stability resulting from construction of onshore portions of themore » Southeast Alaska Acoustic Measurement Facility (SEAFAC).« less

Identifying tsunami deposits using shell taphonomy: Sur lagoon, Oman

NASA Astrophysics Data System (ADS)

Donato, S.; Reinhardt, E.; Rothaus, R.; Boyce, J.

2007-05-01

On November 28th, 1945 an 8.1 magnitude earthquake focused in the eastern portion of the Makran subduction zone (Arabian Sea) generated a powerful tsunami that destroyed many coastal villages in Pakistan and India. Reports indicate that the tsunami also caused significant damage in Muscat, Oman, although its effects elsewhere in Oman are unknown. A thick bivalve dominated shell horizon was discovered inside the Sur lagoon, which is located on the eastern promontory of Oman (200 km south of Muscat). This shell deposit is significant because it is laterally extensive (> 1 km2), extends deep within the lagoon (>2 km), ranges in thickness from 5 - 25 cm at the sample localities, contains numerous subtidal and offshore bivalve species, and articulated subtidal and offshore bivalve species are abundant. Although there is an absence of typical tsunami indicators such as allochthonous sediment in and around the lagoon, verbal accounts, cultural evidence recovered during coring, and the absence of strong storms during the past 100 years indicates that this shell unit was caused by the 1945 tsunami. In this setting, it would be advantageous to have another proxy for tsunami detection and risk prediction. The use of shell taphonomy is one of the potential indicators and here we present new evidence of its utility. We sampled this unit in eight locations, and compared the shell taphonomy to surface shell samples collected from beach and reworked horizons in the lagoon, and to shell samples from a known tsunami and corresponding storm/ballast deposit in Israel (Reinhardt et al., 2006). Taphonomic analysis yielded promising results, as the two tsunami horizons shared excellent agreement between the amount of fragmented shells, and the percentage of shells displaying angular breaks. Both of these categories were significantly different from the percentage of fragments and angular fragments recovered from the reworked, beach, and storm/ballast deposits, indicating different environmental factors acting upon the shell assemblages. These results suggest that tsunamigenic shell deposits can be identified based on their taphonomic characteristics when compared to beach and storm deposits in the same setting. Our data indicates that the following diagnostic taphonomic characteristics may indicate a tsunamigenic deposit: 1) presence/absence of articulated bivalves, 2) increased percentage of fragmented valves, 3) increased percentage of angular fragments, and 4) the large number of offshore bivalves in the lagoon. This study highlights the potential benefits and opportunity for using bivalve taphonomy as a useful indicator of paleotsunami deposits, particularly in protected coastal embayments in arid regions where stratified deposits might not readily preserve. This technique holds potential, as shell deposits are easy to identify in the field by non-experts, is very low cost, and analysis uses simple, easily applicable and recognizable taphonomic characteristics. Furthermore, this proxy can be used for risk assessment purposes in coastal areas with a seismic history but lacking a paleotsunami record. Further testing of this hypothesis should be conducted along the Omani coastline, particularly in the lagoons along the Eastern promontory. Key Words: tsunami, taphonomy, Oman, bivalve

Shallow water sea slugs (Gastropoda: Heterobranchia) from the northwestern coast of the Sea of Japan, north of Peter the Great Bay, Russia

PubMed Central

2016-01-01

The coast of northern Primorye region, north of Peter the Great Bay has been sparsely studied in regards to its molluscan fauna, with just a few works reviewing the distribution of local mollusks. This work presents a survey of the shallow water heterobranch sea slugs currently occurring around Kievka Bay to Oprichnik Bay, Russia. Thirty-nine species of sea slugs were found in this study and the new species Cadlina olgae sp. nov., described herein. Most (24) of the species occurring in the area have widespread ranges in the northern Pacific Ocean. The eight species are endemic for the Sea of Japan and adjacent part of the Sea of Okhotsk. Seven other occur also in northern Atlantic and Arctic waters. Thirteen found species are not known from Peter the Great Bay but known from adjacent northern Pacific waters. The finding of a previously undescribed species emphasizes the need of further surveys, particularly in subtidal and deeper waters, in order to improve the knowledge on this neglected fauna in Primorye. PMID:27957399

Subtidal benthic megafauna in a productive and highly urbanised semi-enclosed bay (Ría de Vigo, NW Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Aneiros, Fernando; Rubal, Marcos; Troncoso, Jesús S.; Bañón, Rafael

2015-11-01

The Ría de Vigo is a semi-enclosed bay with high primary productivity due to the influence of coastal upwelling-downwelling dynamics. The area is heavily populated and affected by numerous human activities, which lead to sediment modification. Epibenthic megafauna from the non-estuarine zones of this bay has been studied in order to describe its spatial distribution, testing possible differences between inner and outer areas. With that purpose, 75 sites have been sampled by means of a towing dredge. Megafauna was identified to the lowest taxonomic level possible, and each taxon counted and weighted. 113 different taxa were identified and a high spatial heterogeneity was observed in terms of abundance, biomass, taxa richness, diversity and evenness. Suspension-feeding molluscs dominated the innermost part of the studied area, and were substituted by echinoderms towards the external zones; this spatial pattern was also reflected in the results of multivariate analyses. These shifts in taxonomic and trophic guild composition of the assemblages have been tentatively related to differences in pollution levels and primary productivity along the main axis of the bay.

Nature and regional significance of unconformities associated with the Middle Ordovician Hagan K-bentonite complex in the North American midcontinent

USGS Publications Warehouse

Kolata, Dennis R.; Huff, W.D.; Bergstrom, Stig M.

1998-01-01

Stratal patterns of the Middle Ordovician Hagan K-bentonite complex and associated rocks show that the Black River-Trenton unconformity in the North American midcontinent formed through the complex interplay of eustasy, sediment accumulation rates, siliciclastic influx, bathymetry, seawater chemistry, and perhaps local tectonic uplift. The unconformity is diachronous and is an amalgamated surface that resulted from local late Turinian lowstand exposure followed by regional early Chatfieldian transgressive drowning and sediment starvation. The duration of the unconformity is greatest in southern Wisconsin, northern Illinois, and northern Indiana, where the Deicke and Millbrig K-bentonite Beds converge at the unconformity. On the basis of published isotopic ages for the Deicke and Millbrig beds, it is possible that in these regions erosion and non-deposition spanned a period of as much as 3.2 m.y. Two broad coeval depositional settings are recognized within the North American midcontinent during early Chatfieldian time. 1) An inner shelf, subtidal facies of fossiliferous shale (Spechts Ferry Shale Member and Ion Shale Member of the Decorah Formation) and argillaceous lime mudstone and skeletal wackestone (Guttenberg and Kings Lake Limestone Members) extended from the Canadian shield and Transcontinental arch southeastward through Minnesota, Wisconsin, Iowa, and Missouri. 2) A seaward, relatively deep subtidal, sediment-starved, middle shelf extended eastward from the Mississippi Valley region to the Taconian foreland basins in the central and southern Appalachians and southward through the pericratonic Arkoma and Black Warrior basins. In the inner shelf region, the Black River-Trenton unconformity is a composite of at least two prominent hardground omission surfaces, one at the top of the Castlewood and Carimona Limestone Members and the other at the top of the Guttenberg and Kings Lake Limestone Members, both merging to a single surface in the middle shelf region. The inner and middle shelves redeveloped later in approximately the same regions during Devonian and Mississippian time.

Solar radiation (PAR and UVA) and water temperature in relation to biochemical performance of Gelidium corneum (Gelidiales, Rhodophyta) in subtidal bottoms off the Basque coast

NASA Astrophysics Data System (ADS)

Quintano, Endika; Ganzedo, Unai; Díez, Isabel; Figueroa, Félix L.; Gorostiaga, José M.

2013-10-01

Gelidium corneum (Hudson) J.V. Lamouroux is a very important primary producer in the Cantabrian coastal ecosystem. Some local declines in their populations have been recently detected in the Basque coast. Occurrences of yellowing and an unusual branch breakdown pattern have also been reported for some G. corneum populations. In order to gain further insight into those environmental stressors operating at a local scale, here we investigate if shallow subtidal populations of G. corneum living under potentially different conditions of irradiance (PAR and UVA) and water temperature exhibit differences in some biochemical indicators of stress, namely C:N, antioxidant activity (radical cation of 2,2‧-azino-bis (3-ethylbenzothiazoline-6-sulfonate); ABTS+ assay) and mycosporine-like amino acids (MAAs) (Asterine 330 and Palythine). We hypothesised that G. corneum subjected to higher ambient levels of irradiance and water temperature would show higher C:N ratios, lower antioxidant activity and higher MAA concentrations. Our results partially support this hypothesis. We found that G. corneum exposed to increased levels of irradiance (PAR, UVA) exhibited greater C:N ratios and lower antioxidant activity (higher IC50), whereas no relationship was found regarding MAAs. No differences in biochemical performance in relation to temperature were detected among G. corneum exposed to comparable high light. Similarly, G. corneum growing under lower UVA radiation levels showed no differences in any of the measured biochemical variables with regard to PAR and water temperature. These findings suggest that, among the environmental factors examined, UVA radiation may be an important driver in regulating the along-shore variation in G. corneum biochemical performance. Therefore, the role of irradiance, especially UV radiation, in potential future alterations in Cantabrian G. corneum populations cannot be ruled out as a potential underlying factor.

The Role of the Sedimentary Regime in Shaping the Distribution of Subtidal Sandbank Environments and the Associated Meiofaunal Nematode Communities: An Example from the Southern North Sea

PubMed Central

Schratzberger, Michaela; Larcombe, Piers

2014-01-01

We combined sediment and faunal data to explore the role of the sedimentary regime in shaping the distribution of subtidal sandbank environments and the associated meiofaunal nematode communities at Broken Bank and Swarte Bank, in the southern North Sea. A variety of sediment transport processes occur in the area, differing in the frequency and magnitude of sediment mobility, and the continuum between erosion, translation and sediment accumulation. The seabed contained a variety of bedforms, including longitudinal furrows, and small to very large sandwaves. The bed sediments were dominated by fine and medium sands, with admixtures of silt and gravel. Based on sedimentary bedforms and grain size analysis, a total of 11 sedimentary facies were delineated, of which 8 were analysed in detail for their relationships with the meiofauna. The sedimentary facies fell clearly into groups of facies, respectively representing high, high-moderate and moderate, and episodic sediment mobility. For those sedimentary facies where daily movement of sediments and bedforms occurred (‘high’ sediment mobility), the resulting spatially homogeneous environments were dominated by an impoverished nematode community comprising small deposit feeders and large predators. Resistance to sediment movement and the ability to exploit alternative food sources were prominent functional features of the successful colonisers. Those facies characterised by relatively infrequent sediment mobility (‘episodic’ and ‘high-moderate and moderate’ sediment mobility) comprised a heterogeneous suite of benthic habitats, containing taxonomically and functionally diverse assemblages of nematodes of various sizes, feeding types and reproductive potential. Faunal distribution patterns here indicated trade-offs between the resistance to sediment movement, environmental tolerance and competitive abilities. Our focus on diverse assemblages of organisms with high turnover times, inhabiting highly dynamic sedimentary environments, has revealed new animal-sediment relationships of relevance to pure and applied science. PMID:25296029

Warming off southwestern Japan linked to distributional shifts of subtidal canopy-forming seaweeds.

PubMed

Tanaka, Kouki; Taino, Seiya; Haraguchi, Hiroko; Prendergast, Gabrielle; Hiraoka, Masanori

2012-11-01

To assess distributional shifts of species in response to recent warming, historical distribution records are the most requisite information. The surface seawater temperature (SST) of Kochi Prefecture, southwestern Japan on the western North Pacific, has significantly risen, being warmed by the Kuroshio Current. Past distributional records of subtidal canopy-forming seaweeds (Laminariales and Fucales) exist at about 10-year intervals from the 1970s, along with detailed SST datasets at several sites along Kochi's >700 km coastline. In order to provide a clear picture of distributional shifts of coastal marine organisms in response to warming SST, we observed the present distribution of seaweeds and analyzed the SST datasets to estimate spatiotemporal SST trends in this coastal region. We present a large increase of 0.3°C/decade in the annual mean SST of this area over the past 40 years. Furthermore, a comparison of the previous and present distributions clearly showed the contraction of temperate species' distributional ranges and expansion of tropical species' distributional ranges in the seaweeds. Although the main temperate kelp Ecklonia (Laminariales) had expanded their distribution during periods of cooler SST, they subsequently declined as the SST warmed. Notably, the warmest SST of the 1997-98 El Niño Southern Oscillation event was the most likely cause of a widespread destruction of the kelp populations; no recovery was found even in the present survey at the formerly habitable sites where warm SSTs have been maintained. Temperate Sargassum spp. (Fucales) that dominated widely in the 1970s also declined in accordance with recent warming SSTs. In contrast, the tropical species, S. ilicifolium, has gradually expanded its distribution to become the most conspicuously dominant among the present observations. Thermal gradients, mainly driven by the warming Kuroshio Current, are presented as an explanation for the successive changes in both temperate and tropical species' distributions.

Seasonal variation of assemblage and feeding guild structure of fish species in a boreal tidal basin

NASA Astrophysics Data System (ADS)

Kellnreitner, Florian; Pockberger, Moritz; Asmus, Harald

2012-08-01

Species composition, abundance, feeding relationships and guild structure of the fish assemblage in the Sylt-Rømø bight, a tidal basin in the northern Wadden Sea, were investigated to show seasonal differences and the importance of functional groups in this area. The tidal flats and in shallow subtidal areas were sampled using a beach seine and a bottom trawl net was used for deeper subtidal areas and tidal gullies. Species richness of fish was highest in summer where 26 species were caught, while the lowest richness was recorded in winter (17 species). Clear differences in species richness and abundance were found between shallow areas and deeper parts of the bight. Clupea harengus and Ammodytes tobianus were the most abundant species in deeper areas, while Pomatoschistus microps and Pomatoschistus minutus dominated shallower waters. Gut contents of 27 fish species were identified and the guild structure analyzed by UPGMA clustering of niche overlaps. Calanoid copepods (19.9%), Crangon crangon (18.2%) and mysid shrimps (8.4%) were the most abundant prey items of all fish species combined. Seven feeding guilds were present in the fall and winter, and eight and six in spring and summer, respectively. Fish feeding on calanoid copepods and C. crangon were present year round, whereas the occurrence of other guilds varied between seasons. Species composition of prey changed through seasons and, for some fish species, even the feeding mode itself varied with season. Most noticeable, 11 fish species changed guilds between seasons. We found a convergence in summer towards abundant prey items, whereas in winter diet overlap was lower. This is the first investigation of guild structure of almost all fish species present in a Wadden Sea area, and shows that consideration of seasonal differences is essential when determining feeding relationships of fish in temperate areas.

Time course and magnitude of synthesis of heat-shock proteins in congeneric marine snails (Genus tegula) from different tidal heights.

PubMed

Tomanek, L; Somero, G N

2000-01-01

The time course and magnitude of the heat-shock response in relation to severity of thermal stress are important, yet poorly understood, aspects of thermotolerance. We examined patterns of protein synthesis in congeneric marine snails (genus Tegula) that occur at different heights along the subtidal to intertidal gradient after a thermal exposure (30 degrees C for 2.5 h, followed by 50 h recovery at 13 degrees C) that induced the heat-shock response. We monitored the kinetics and magnitudes of protein synthesis by quantifying incorporation of 35S-labeled methionine and cysteine into newly synthesized proteins and observed synthesis of putative heat-shock proteins (hsp's) of size classes 90, 77, 70, and 38 kDa. In the low- to mid-intertidal species, Tegula funebralis, whose body temperature frequently exceeds 30 degrees C during emersion, synthesis of hsp's commenced immediately after heat stress, reached maximal levels 1-3 h into recovery, and returned to prestress levels by 6 h, except for hsp90 (14 h). In contrast, in the low-intertidal to subtidal species, Tegula brunnea, for which 2.5 h at 30 degrees C represents a near lethal heat stress, synthesis of hsp's commenced 2-14 h after heat stress; reached maximal levels after 15-30 h, which exceeded magnitudes of synthesis in T. funebralis; and returned to prestress levels in the case of hsp90 (50 h) and hsp77 (30 h) but not in the case of hsp70 and hsp38. Exposures to 30 degrees C under aerial (emersion) and aquatic (immersion) conditions resulted in differences in hsp synthesis in T. brunnea but not in T. funebralis. The different time courses and magnitudes of hsp synthesis in these congeners suggest that the vertical limits of their distributions may be set in part by thermal stress.

Stability and change in kelp forest habitats at San Nicolas Island

USGS Publications Warehouse

Kenner, Michael C.; Tinker, M. Tim

2018-01-01

Kelp forest communities are highly variable over space and time. Despite this complexity it has been suggested that kelp forest communities can be classified into one of 2 states: kelp dominated or sea urchin dominated. It has been further hypothesized that these represent “alternate stable states” because a site can remain in either of these states for decades before some perturbation causes a rapid shift to the other state. Our research group has maintained a subtidal community monitoring program for 38 years at San Nicolas Island consisting of twice-annual scuba-based surveys at 6 sites distributed within 4 regions around the island. Three types of perturbations are thought to be relevant to subtidal community dynamics at San Nicolas: (1) physical disturbances in the form of major storm and El Niño/Southern Oscillation (ENSO) events; (2) invertebrate diseases, which periodically decimate urchin populations; and (3) the reintroduction and subsequent increase of sea otters (Enhydra lutris nereis). These 3 perturbations differ in spatial and temporal specificity; physical disturbances and disease outbreaks occur periodically and could affect all 4 regions, while sea otter predation has been concentrated primarily at the West End sites over the last 15 years. The different types of perturbations and the duration of the time series at the kelp forests at San Nicolas make the data set ideal for testing the “alternate stable state” hypothesis. We use nonmetric multidimensional scaling (NMDS) to examine spatial and temporal patterns of community similarity at the 4 regions. In particular, we evaluate support for the existence of stable states, which are represented on NMDS plots as distinct spatial clusters. Community dynamics at each site approximated a biased random walk in NMDS space, with one or more basins of attraction and occasional jumps between basins. We found evidence for alternative stable states at some sites, and we show that transitions from one stable state to another may be influenced by interactions between multiple perturbations.

Lateral variations of carbonate platform facies and cycles: The Dachstein Limestone (Late Triassic, Northern Calcareous Alps, Austria)

NASA Astrophysics Data System (ADS)

Samankassou, Elias; Enos, Paul

2017-04-01

The driving mechanisms of cyclic patterns in shallow-water platform carbonates remain controversial. The focus of the present paper is to quantify lateral facies variations for a long stratigraphic record in an extensive, continuous, well-exposed cliff of the Dachstein platform that is composed, as many other Phanerozoic carbonate platforms, of peritidal deposits. We noted the lateral continuity of the beds to the degree permitted by the outcrop, generally a few tens or hundreds of meters; exceptionally up to 1.7 km. The study demonstrates the importance of quantification to evaluate origins of sedimentary cycles. The upper 885 m of the Triassic Dachstein platform limestone at Steinernes Meer, Saalfelden, Austria, includes 241 peritidal cycles overlain by 275 m of subtidal, non-cyclic and weakly cyclic limestone. Of 558 subtidal and intertidal beds measured, 121 (21.7%) disappear laterally. An additional 74 beds (13.3%) show significant (>10%) lateral variations in thickness. Mean thickness variation is 50%. Both lateral variations and discontinuities appear to lack a spatial vector. Disappearances toward the inferred platform interior (west), total 10.4% of the beds. East toward the inferred platform margin 11.3% of the beds disappear. Thickness changes occur in 6.6% of beds in each direction. The lack of lateral continuity of beds is consistent with a non-eustatic component to stratification. Erosion of intertidal intervals is the process that can be most readily documented. Erosion, transport, and non-uniform distribution of sediments, superposed on stratigraphic sequences driven by eustacy, are the likely processes which produced the complex, randomly recorded cycle patterns. Cycle duration may not be exclusively determined by Milankovitch processes, as suggested by the discrepancies in the cycle duration and interpretation among stratigraphers of the Dachstein, as well as other Phanerozoic carbonate platforms. Signals deduced from linearly measured sections likely represent composite inherent and extrabasinal factors; they should not be automatically interpreted as exclusive records of eustatic orbital forcing. Lateral discontinuities and thickness variations could also present problems in spectral analysis of thickness patterns, typically conducted in search of "Milankovich frequencies", as well as in construction of "Fischer plots," to analyze long-period oscillations in relative sea level. Any section subjected to cycle analysis should be examined for lateral changes, to the extent permitted by the exposures, in order to produce the most complete (composite) section possible.

Consequences of Increasing Hypoxic Disturbance on Benthic Communities and Ecosystem Functioning

PubMed Central

Villnäs, Anna; Norkko, Joanna; Lukkari, Kaarina; Hewitt, Judi; Norkko, Alf

2012-01-01

Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH4 + and dissolved Si. Although effluxes of PO4 3− were not altered significantly, changes were observed in sediment PO4 3− sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat matters, and that the link between biodiversity and ecosystem function is likely to be affected by a range of factors in complex, natural environments. PMID:23091592

Dispersion of adult Cancer magister at Glacier Bay, Alaska: Variation with spatial scale, sex, and reproductive status

USGS Publications Warehouse

O'Clair, Charles E.; Shirley, Thomas C.; Taggart, S. James

1996-01-01

Patterns of micro- to mesoscale distribution of Dungeness crabs (Cancer magister) in nearshore habitats at five locations in and near Glacier Bay National Park were revealed using subtidal transects. Sampling was conducted in April and September 1992 and 1993 and April 1994. Divers censused crabs by sex and reproductive status (ovigerous/nonovigerous females) along belt transects (2 m x 100 m) perpendicular to shore in the depth range 0 m (mean lower low water) to 18 m. A sample estimator of Morisita's index (Î*Δ) was used to quantify crab dispersion at 10 scales of measurement ranging from 20 m2 to 200 m2 at each location during each sampling period.Values of Î*Δ in ovigerous female C. magister deviated significantly (P < 0.05) from 1.0 (random distribution) toward contagion more frequently than did Î*Δ for nonovigerous female and male crabs. Ovigerous crabs also usually had higher Î*Δ than did nonovigerous female and male crabs, especially at smaller measurement scales (20-80 m2). Morisita's index for all three groups of crabs decreased more frequently than it increased with an increase in measurement scale. We observed no relationship between t and crab density in nonovigerous female and male crabs, whereas Î*Δ was positively correlated with the density of ovigerous crabs. A total of 13 dense aggregations of ovigerous C. magister were observed nearshore (depth range 0-10 m) at the five study locations. About half of these were repeatedly observed at the same microsite over the course of this study. Ovigerous Dungeness crabs at Glacier Bay were usually aggregated, often forming dense aggregations with high site fidelity. These dense aggregations may concentrate a significant proportion of the brood stock of this species in a limited number of patches of optimal brooding habitat at Glacier Bay.

Consequences of spring phytodetritus sedimentation on the benthic compartment along a depth gradient in the Eastern English Channel.

PubMed

Denis, Lionel; Desroy, Nicolas

2008-11-01

Phaeocystis blooms are of major importance in the Eastern English Channel, where they significantly contribute to spring organic matter input with chlorophyll concentrations commonly higher than 30 microgl(-1) in the water column. Post-bloom deposition of Phaeocystis derived mucilaginous compounds has been shown to have a major importance on benthic intertidal systems, but resulting mineralization processes and consequences on the macrobenthic compartment remain poorly documented in subtidal areas. In this frame, a study was performed along the French coast of the English Channel to quantify mineralization processes, as well as potential consequences on subtidal sediments, especially their geochemistry and associated macrofaunal communities. Seven stations were studied along a depth gradient during four cruises: before (March), during (April, May) and after (June) the spring bloom. Sediment characteristics and organic carbon content were described, as well as sediment-water fluxes of oxygen and ammonium. Macrofaunal characteristics were also analyzed. Stations were chosen as representative of the various benthic communities present in the area, which are directly linked to the granulometric characteristics of the sediments. To account for the general functioning of the water column, characterized by a coastal flow where higher concentrations of Phaeocystis are generally recorded, similar communities were sampled inshore and offshore, when possible: (i) the Abra alba community located only close to the coast, (ii) the Ophelia borealis community located inshore and offshore, and (iii) the Amphioxus lanceolatus community located inshore and offshore. Generally, low exchange rates of oxygen and ammonium were measured (respectively, in the range 50-150 micromol O2 m(-2)h(-1) and -25 to 35 micromol NH4+ m(-2)h(-1)) between the water column and the muddy-sand to coarse sand permeable sediments, as a consequence of the low organic carbon content due to the high hydrodynamic forcing. As a consequence of organic matter accumulation in surficial sediments probably resulting from Phaeocystis post-bloom deposition, an increase of sediment oxygen demand and ammonium release was clearly evidenced up to 660 micromol O2 m(-2)h(-1) and 205 micromol NH4+ m(-2)h(-1) in May, only in stations located close to the coast (<8 kms), in the A. alba community. Despite those significant biogeochemical changes in surficial sediments, no significant consequence was pointed out on macrofauna, neither in the O. borealis and A. lanceolatus communities, nor in the coastal A. alba community. Most of the temporal variations recorded might be attributed to the common spring population dynamics, but this study highlights the potential use of geochemical parameters as a forewarning signal of benthic disequilibrium.

Distribution of Technetium-99 in sub-tidal sediments of the Irish Sea

NASA Astrophysics Data System (ADS)

McCubbin, David; Leonard, Kinson S.; McDonald, Paul; Bonfield, Rachel; Boust, Dominique

2006-03-01

To date, relatively little attention has been given to the accumulation of 99Tc discharged from Sellafield in the subtidal sediments of the Irish Sea. The potential implications for secondary seafood contamination from contaminated sediment has driven the UK Food Standards Agency to commission further research into this pathway. The work reported here reviews existing data and provides new measurements of 99Tc specific activity in surface and sub-surface sediments of the Irish Sea, together with environmental Kd values. The results are used to assess the spatial and temporal evolution of 99Tc in the seabed after 8 years of enhanced Sellafield discharges (between 1994 and 2002), of the aforementioned radionuclide. The information is discussed with reference to other studies, in an attempt to infer the processes controlling 99Tc uptake and release from seabed sediments. The average environmental Kd value for 99Tc in the Irish Sea (1.9×10 3) was more than an order of magnitude greater than the presently recommended value of 10 2 [IAEA, 2004. Sediment distribution coefficients and concentration factors for biota in the marine environment. Technical Report Series No. 422, IAEA, Vienna]. Comparison with results from laboratory studies indicates that the observed distribution may represent metastable binding rather than thermodynamic equilibrium. Activities in surface sediments decreased with increasing distance from Sellafield but were also dependent upon the nature of the underlying substrate, being greater on muddy material. Preliminary measurements of grain-size distribution indicated that the observed variation in activities was probably not due to surface area effects. There is an emerging body of evidence from other studies that indicate the differences were most likely due to variations in redox regimes between the different substrates. Vertical profiles were significantly irregular, probably due to the effects of variable sediment mixing processes. Comparison of profiles, close to the Sellafield pipeline, with a core taken over 20 years earlier (pre-EARP) indicated that the increase in the cumulative Sellafield discharge and redissolution from surficial sediment were required to explain the temporal variation. Since the surveys reported here were completed, substantial progress has been made in reducing 99Tc discharges from Sellafield. Assuming that the rate and extent of 99Tc remobilisation follows a similar pattern to that previously observed for caesium ( 137Cs), then the half-time for redissolution of 99Tc bound to sedimentary material in the Irish Sea is likely to be of the order of several tens of years. It is probable that small but nevertheless measurable 99Tc contamination of local seafood will persist for several decades, due to this secondary source.

Les microbialites de l'Anti-Atlas occidental (Maroc) : marqueurs stratigraphiques et témoins des changements environnementaux au Cambrien inférieur Stratigraphic and environmental significance of the Lower-Cambrian western Anti-Atlasic microbialites (Morocco)

NASA Astrophysics Data System (ADS)

Benssaou, Mohammed; Hamoumi, Naima

2004-02-01

Three microbialite forms are recognized in the Lower-Cambrian succession of Irherm area in the western Anti-Atlas (Morocco). Stromatolites, which correspond to non-calcified shallow marine laminated microbialites, are well developed in the basal Lower-Cambrian succession. Occurrence of calcified microbial thrombolites, in the middle part of this succession, reflects an increasing sea level from the peritidal zone to the subtidal environment. In the upper part of this succession, a second increasing water depth event and the development of branching archaeocyathan reefal framework lead to dendritic microbialite emergence. To cite this article: M. Benssaou, N. Hamoumi, C. R. Geoscience 336 (2004).

Eelgrass habitat near Liberty Bay: Chapter 5

USGS Publications Warehouse

Dinicola, Richard S.; Takesue, Renee K.

2015-01-01

Seagrasses are a widespread type of marine flowering plants that grow in nearshore intertidal and subtidal zones. Seagrass beds are ecologically important because they affect physical, biological, and chemical characteristics of nearshore habitat, and they are sensitive to changes in coastal water quality (Stevenson and others, 1993; Koch, 2001; Martinez-Crego and others, 2008). Zostera marina, commonly known as eelgrass, is protected by a no-net-loss policy in Washington State where it may be used as spawning habitat by herring, a key prey species for salmon, seabirds, and marine mammals (Bargmann, 1998). Eelgrass forms broad meadows in shallow embayments or narrow fringes on open shorelines (Berry and others, 2003). Anthropogenic activities that increase turbidity, nutrient loading, and physical disturbance at the coast can result in dramatic seagrass decline (Ralph and others, 2006).

High-resolution geophysical data from the Inner Continental Shelf: South of Martha's Vineyard and north of Nantucket, Massachusetts

USGS Publications Warehouse

Ackerman, Seth D.; Brothers, Laura L.; Foster, David S.; Andrews, Brian D.; Baldwin, Wayne E.; Schwab, William C.

2016-10-28

The U.S. Geological Survey and the Massachusetts Office of Coastal Zone Management have cooperated to map approximately 185 square kilometers of the inner continental shelf south of Martha’s Vineyard and north of Nantucket, Massachusetts. This report contains geophysical data collected by the U.S. Geological Survey during a survey in 2013. The geophysical data include (1) swath bathymetry collected by using interferometric sonar, (2) acoustic backscatter from the interferometric sonar, and (3) seismic-reflection profiles from a chirp subbottom profiler. These spatial data support research on the Quaternary evolution of coastal Massachusetts, the influence of sea-level change and sediment supply on coastal evolution, and efforts to understand the type, distribution, and quality of subtidal marine habitats in the coastal ocean of Massachusetts.

Response of shoal grass, Halodule wrightii, to extreme winter conditions in the Lower Laguna Madre, Texas

USGS Publications Warehouse

Hicks, D.W.; Onuf, C.P.; Tunnell, J.W.

1998-01-01

Effects of a severe freeze on the shoal grass, Halodule wrightii, were documented through analysis of temporal and spatial trends in below-ground biomass. The coincidence of the second lowest temperature (-10.6??C) in 107 years of record, 56 consecutive hours below freezing, high winds and extremely low water levels exposed the Laguna Madre, TX, to the most severe cold stress in over a century. H. wrightii tolerated this extreme freeze event. Annual pre- and post-freeze surveys indicated that below-ground biomass estimated from volume was Unaffected by the freeze event. Nor was there any post-freeze change in biomass among intertidal sites directly exposed to freezing air temperatures relative to subtidal sites which remained submerged during the freezing period.

Upper Albian to Lower Turonian deposits and associated breccias along the Dahar cuestas (southeastern Tunisia): Origin and depositional environments

NASA Astrophysics Data System (ADS)

Krimi, Mabrouk; Ouaja, Mohamed; Zargouni, Fouad

2017-11-01

The carbonate Zebbag Formation of Upper Albian to Lower Turonian age which outcrops along the Dahar cuestas (south eastern Tunisia) includes several breccia intervals. The stratigraphic hierarchy of these breccia levels led to achieving a detailed sequential analysis within a spectrum of depositional environments extending from subtidal to inner to middle ramp settings. Six major transgressive/regressive sequences make up the stacking of the elementary sequences beginning with transgressive and/or storm wave breccias capped by desiccation and/or collapse breccias. The stratigraphic evolutionary history of the breccia facies are interpreted as the result of the interplay between eustatic and tectonic factors. This model is in accord with the tectonic activities common during Upper Albian-Lower Turonian responsible for the sequences onlapping.

Measuring the role of seagrasses in regulating sediment surface elevation

USGS Publications Warehouse

Potouroglou, Maria; Bull, James C.; Krauss, Ken W.; Kennedy, Hilary A.; Fusi, Marco; Daffonchio, Daniele; Mangora, Mwita M.; Githaiga, Michael N.; Diele, Karen; Huxham, Mark

2017-01-01

Seagrass meadows provide numerous ecosystem services and their rapid global loss may reduce human welfare as well as ecological integrity. In common with the other ‘blue carbon’ habitats (mangroves and tidal marshes) seagrasses are thought to provide coastal defence and encourage sediment stabilisation and surface elevation. A sophisticated understanding of sediment elevation dynamics in mangroves and tidal marshes has been gained by monitoring a wide range of different sites, located in varying hydrogeomorphological conditions over long periods. In contrast, similar evidence for seagrasses is sparse; the present study is a contribution towards filling this gap. Surface elevation change pins were deployed in four locations, Scotland, Kenya, Tanzania and Saudi Arabia, in both seagrass and unvegetated control plots in the low intertidal and shallow subtidal zone. The presence of seagrass had a highly significant, positive impact on surface elevation at all sites. Combined data from the current work and the literature show an average difference of 31 mm per year in elevation rates between vegetated and unvegetated areas, which emphasizes the important contribution of seagrass in facilitating sediment surface elevation and reducing erosion. This paper presents the first multi-site study for sediment surface elevation in seagrasses in different settings and species.

Measuring the role of seagrasses in regulating sediment surface elevation.

PubMed

Potouroglou, Maria; Bull, James C; Krauss, Ken W; Kennedy, Hilary A; Fusi, Marco; Daffonchio, Daniele; Mangora, Mwita M; Githaiga, Michael N; Diele, Karen; Huxham, Mark

2017-09-20

Seagrass meadows provide numerous ecosystem services and their rapid global loss may reduce human welfare as well as ecological integrity. In common with the other 'blue carbon' habitats (mangroves and tidal marshes) seagrasses are thought to provide coastal defence and encourage sediment stabilisation and surface elevation. A sophisticated understanding of sediment elevation dynamics in mangroves and tidal marshes has been gained by monitoring a wide range of different sites, located in varying hydrogeomorphological conditions over long periods. In contrast, similar evidence for seagrasses is sparse; the present study is a contribution towards filling this gap. Surface elevation change pins were deployed in four locations, Scotland, Kenya, Tanzania and Saudi Arabia, in both seagrass and unvegetated control plots in the low intertidal and shallow subtidal zone. The presence of seagrass had a highly significant, positive impact on surface elevation at all sites. Combined data from the current work and the literature show an average difference of 31 mm per year in elevation rates between vegetated and unvegetated areas, which emphasizes the important contribution of seagrass in facilitating sediment surface elevation and reducing erosion. This paper presents the first multi-site study for sediment surface elevation in seagrasses in different settings and species.

Shallow water heterobranch sea slugs (Gastropoda: Heterobranchia) from the Región de Atacama, northern Chile

PubMed Central

Valdés, Ángel

2016-01-01

The coast of northern Chile has been sparsely studied in regards to its invertebrate fauna, with just a few works reviewing the distribution of local mollusks. This work presents a survey of the shallow water heterobranch sea slugs currently occurring around the port of Caldera (27 °S), in the Región de Atacama, northern Chile. Eight species of sea slugs were found in this study: Aplysiopsis cf. brattstroemi (Marcus, 1959), Baptodoris peruviana (d’Orbigny, 1837), Diaulula variolata (d’Orbigny, 1837), Doris fontainii d’Orbigny, 1837, Onchidella marginata (Couthouy in Gould, 1852), Phidiana lottini (Lesson, 1831), Tyrinna delicata (Abraham, 1877) and the new species Berthella schroedli sp. nov., described herein. All of the species found in the area are endemic to South America, having distributions in the southeastern Pacific and South Atlantic Oceans, from Ancash, Perú to Peninsula Valdés, Argentina, and two of them represent species which are endemic to the Chilean coasts (Aplysiopsis cf. brattstroemi and Berthella schroedli). The finding of a previously undescribed species emphasizes the need of further surveys, particularly in subtidal and deeper waters, in order to improve the knowledge on this neglected fauna in Atacama. PMID:27168975

Robustness of larval development of intertidal sea urchin species to simulated ocean warming and acidification.

PubMed

García, Eliseba; Hernández, José Carlos; Clemente, Sabrina

2018-08-01

Ocean warming and acidification are the two most significant side effects of carbone dioxide emissions in the world's oceans. By changing water, temperature and pH are the main environmental factors controlling the distribution, physiology, morphology and behaviour of marine invertebrates. This study evaluated the combined effects of predicted high temperature levels, and predicted low pH values, on fertilization and early development stages of the sea urchins Arbacia lixula, Paracentrotus lividus, Sphaerechinus granularis and Diadema africanum. Twelve treatments, combining different temperatures (19, 21, 23 and 25 °C) and pH values (8.1, 7.7 and 7.4 units), were tested in laboratory experiments. All of the tested temperatures and pH values were within the open coast seawater range expected within the next century. We examined fertilization rate, cleavage rate, 3-day larvae survival, and development of the different sea urchin species at set time intervals after insemination. Our results highlight the susceptibility of subtidal species to environmental changes, and the robustness of intertidal species to ocean warming and acidification. Copyright © 2018 Elsevier Ltd. All rights reserved.

Osteology of the Graveldiver Scytalina cerdale (Perciformes: Zoarcoidei: Scytalinidae).

PubMed

Hilton, Eric J

2009-12-01

The Graveldiver, Scytalina cerdale, is a small, poorly known burrowing fish from the intertidal and subtidal zones of the west coast of North America, ranging from south-central California to Alaska. This is the sole member of the family Scytalinidae, which is included in the Zoarcoidei. Although it was described over 120 years ago, it is rare in natural history collections and its anatomy is only imperfectly known. This article describes and illustrates the skeletal anatomy of S. cerdale based on newly prepared cleared and stained specimens. Many points of its anatomy are clarified or corrected (e.g., presence of the intercalars and ribs, in contrast to their reported absence) or described for the first time (e.g., structure of its gill-arches). Previous hypotheses of its systematic placement within the Zoarcoidei are discussed. On the basis of preliminary comparisons, S. cerdale may have phylogenetic affinity with at least some members of the family Stichaeidae (e.g., Xiphister). However, further study is needed on the anatomy and inter-relationships of the families of the Zoarcoidei before any conclusions can be made. (c) 2009 Wiley-Liss, Inc.

High-resolution geophysical data collected aboard the U.S. Geological Survey research vessel Rafael to supplement existing datasets from Buzzards Bay and Vineyard Sound, Massachusetts

USGS Publications Warehouse

Pendleton, Elizabeth A.; Andrews, Brian D.; Danforth, William W.; Foster, David S.

2014-01-01

Geophysical and geospatial data were collected in Buzzards Bay, in the shallow-water areas of Vineyard Sound, and in the nearshore areas off the eastern Elizabeth Islands and northern coast of Martha's Vineyard, Massachusetts, on the U.S. Geological Survey research vessel Rafael between 2007 and 2011, in a collaborative effort between the U.S. Geological Survey and the Massachusetts Office of Coastal Zone Management. This report describes results of this collaborative effort, which include mapping the geology of the inner shelf zone of the Elizabeth Islands and the sand shoals of Vineyard Sound and studying geologic processes that contribute to the evolution of this area. Data collected during these surveys include: bathymetry, acoustic backscatter, seismic-reflection profiles, sound velocity profiles, and navigation. The long-term goals of this project are (1) to provide high-resolution geophysical data that will support research on the influence of sea-level change and sediment supply on coastal evolution and (2) to inventory subtidal marine habitats and their distribution within the coastal zone of Massachusetts.

Levels of Cd, Cu, Pb and V in marine sediments in the vicinity of the Single Buoy Moorings (SBM3) at Mina Al Fahal in the Sultanate of Oman.

PubMed

Al-Husaini, Issa; Abdul-Wahab, Sabah; Ahamad, Rahmalan; Chan, Keziah

2014-06-15

Recently in the Sultanate of Oman, there has been a rapid surge of coastal developments. These developments cause metal contamination, which may affect the habitats and communities at and near the coastal region. As a result, a study was conducted to assess the level of metal contamination and its impact on the marine sediments in the vicinity of the Single Buoy Moorings 3 (SBM3) at Mina Al Fahal in the Sultanate of Oman. Marine subtidal sediment samples were collected from six different stations of the SBM3 for the period ranging from June 2009 to April 2010. These samples were then analyzed for their level and distribution of the heavy metals of cadmium (Cd), copper (Cu), lead (Pb) and vanadium (V). Overall, low concentrations of all four heavy metals were measured from the marine sediments, indicating that the marine at SBM3 is of good quality. Copyright © 2014 Elsevier Ltd. All rights reserved.

Documenting a modern day transgressive surface in a carbonate ramp setting

NASA Astrophysics Data System (ADS)

Lokier, Stephen; Paul, Andreas

2017-04-01

The low-angle carbonate ramp geometry of the Abu Dhabi coastline provides an ideal site for studying the effects of marine transgression in a setting analogous to Mesozoic epeiric seas. Supratidal sabkha evaporite precipitation passes offshore, through a broad and complex carbonate-evaporite intertidal environment, into a subtidal carbonate depositional setting. The coast of the mainland is locally isolated from open-marine conditions by a number of peninsulas and islands associated with the east-west trending Great Pearl Bank. This study combined 12 years of fieldwork observations with historical satellite imagery in order to establish multiple lines of evidence for active retrogradation over a 15 km length of coastline in the Abu Dhabi sabkha. Surveyed transects of the sabkha yield an average slope angle of 0.02°. Employing a current estimate of global sea level rise of 3.3 mm/yr, we calculate an expected present-day marine transgression of 7.9 m/yr. The landward and seaward boundaries of the microbial mat facies belt are strongly controlled by the location of the intertidal zone. The seaward limit of the Recent microbial mat belt in the Abu Dhabi Sabkha is currently being buried beneath retrograding lower-intertidal sediments whilst the landward side is simultaneously backstepping over previously-supratidal gypsum-dominated facies. The landward migration of spits and beach ridges was monitored at several locations with rates of retrogradation of up to 28 m per year being recorded locally. The study also identified numerous erosive features that are consistent with an increase in energy regimes. There has been a significant increase in denudation of the microbial mat, causing underlying sediment to be increasingly susceptible to erosion. In the lowermost intertidal zone, erosion of the hardground and other facies is observed. Clasts from the hardground are transported landward onto the surface of the sabkha where they are incorporated within other facies. This study provides definitive evidence that the current sedimentary regime of the Abu Dhabi coastline has entered a retrogradational phase associated with marine transgression. From a sequence stratigraphic perspective, the current system would be identified as a flooding (transgressive) surface.

Low levels of microplastics (MP) in wild mussels indicate that MP ingestion by humans is minimal compared to exposure via household fibres fallout during a meal.

PubMed

Catarino, Ana I; Macchia, Valeria; Sanderson, William G; Thompson, Richard C; Henry, Theodore B

2018-06-01

Microplastics (MPs) are the most numerous debris reported in marine environments and assessment of the amounts of MPs that accumulate in wild organisms is necessary for risk assessment. Our objective was to assess MP contamination in mussels collected around the coast of Scotland (UK) to identify characteristics of MPs and to evaluate risk of human exposure to MPs via ingestion of mussels. We deployed caged mussels (Mytilus edulis) in an urbanised estuary (Edinburgh, UK) to assess seasonal changes in plastic pollution, and collected mussels (Mytilus spp and subtidal Modiolus modiolus) from eight sampling stations around Scotland to enumerate MP types at different locations. We determined the potential exposure of humans to household dust fibres during a meal to compare with amounts of MPs present in edible mussels. The mean number of MPs in M. modiolus was 0.086 ± 0.031 (SE, n = 6)/g ww (3.5 ± 1.29 (SE) per mussel). In Mytilus spp, the mean number of MPs/g ww was 3.0 ± 0.9 (SE, n = 36) (3.2 ± 0.52 (SE) per mussel), but weight dependent. The visual accuracy of plastic fibres identification was estimated to be between 48 and 50%, using Nile Red staining and FT-IR methodologies, respectively, halving the observed amounts of MPs in wild mussels. We observed an allometric relationship between the number of MPs and the mussels wet weight. Our predictions of MPs ingestion by humans via consumption of mussels is 123 MP particles/y/capita in the UK and can go up to 4620 particles/y/capita in countries with a higher shellfish consumption. By comparison, the risk of plastic ingestion via mussel consumption is minimal when compared to fibre exposure during a meal via dust fallout in a household (13,731-68,415 particles/Y/capita). Crown Copyright © 2018. Published by Elsevier Ltd. All rights reserved.

Polygenetic Karsted Hardground Omission Surfaces in Lower Silurian Neritic Limestones: a Signature of Early Paleozoic Calcite Seas

NASA Astrophysics Data System (ADS)

James, Noel P.; Desrochers, André; Kyser, Kurt T.

2015-04-01

Exquisitely preserved and well-exposed rocky paleoshoreline omission surfaces in Lower Silurian Chicotte Formation limestones on Anticosti Island, Quebec, are interpreted to be the product of combined marine and meteoric diagenesis. The different omission features include; 1) planar erosional bedding tops, 2) scalloped erosional surfaces, 3) knobs, ridges, and swales at bedding contacts, and 4) paleoscarps. An interpretation is proposed that relates specific omission surface styles to different diagenetic-depositional processes that took place in separate terrestrial-peritidal-shallow neritic zones. Such processes were linked to fluctuations in relative sea level with specific zones of diagenesis such as; 1) karst corrosion, 2) peritidal erosion, 3) subtidal seawater flushing and cementation, and 4) shallow subtidal deposition. Most surfaces are interpreted to have been the result of initial extensive shallow-water synsedimentary lithification that were, as sea level fell, altered by exposure and subaerial corrosion, only to be buried by sediments as sea level rose again. This succession was repeated several times resulting in a suite of recurring polyphase omission surfaces through many meters of stratigraphic section. Synsedimentary cloudy marine cements are well preserved and are thus interpreted to have been calcitic originally. Aragonite components are rare and thought to have to have been dissolved just below the Silurian seafloor. Large molluscs that survived such seafloor removal were nonetheless leached and the resultant megamoulds were filled with synsedimentary calcite cement. These Silurian inner neritic-strandline omission surfaces are temporally unique. They are part of a suite of marine omission surfaces that are mostly found in early Paleozoic neritic carbonate sedimentary rocks. These karsted hardgrounds formed during a calcite-sea time of elevated marine carbonate saturation and extensive marine cement precipitation. The contemporaneous greenhouse atmosphere was supercharged with CO2 leading to profound surface karst under strongly acid rain. Younger peritidal omission surfaces, although potentially formed during aragonite or calcite sea times, would have been subject to very different terrestrial diagenetic process with lower atmospheric pCO2 values but increasingly complex biogenic soils producing dissimilar alteration features.

Shoreline ecology program for Prince William Sound, Alaska, following the Exxon Valdez oil spill. Part 3: Biology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gilfillan, E.S.; Page, D.S.; Harner, E.J.

1995-12-31

This study describes the biological results of a comprehensive shoreline ecology program designed to assess ecological recovery in Prince William Sound following the Exxon Valdez oil spill on march 24, 1989. The program is an application of the ``Sediment Quality Triad`` approach, combining chemical, toxicological, and biological measurements. The study was designed so that results could be extrapolated to the entire spill zone in Prince William Sound. The spill affected four major shoreline habitat types in Prince William Sound: pebble/gravel, boulder/cobble, sheltered bedrock, and exposed bedrock. The study design had two components: (1) one-time stratified random sampling at 64 sitesmore » representing four habitats and four oiling levels (including unoiled reference sites) and (2) periodic sampling at 12 nonrandomly chosen sites that included some of the most heavily oiled locations in the sound. Biological communities on rock surfaces and in intertidal and shallow subtidal sediments were analyzed for differences resulting from to oiling in each of 16 habitat/tide zone combinations. Statistical methods included univariate analyses of individual species abundances and community parameter variables (total abundance, species richness, and Shannon diversity), and multivariate correspondence analysis of community structure. 58 refs., 13 figs., 9 tabs.« less

Annual Adaptive Management Report for Compensatory Mitigation at Keyport Lagoon: Mitigation of Pier B Development at the Bremerton Naval Facilities - Compensatory Mitigation at Keyport Lagoon - Naval Underwater Warfare Center Division - Keyport, Washington

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vavrinec, John; Borde, Amy B.; Woodruff, Dana L.

Unites States Navy capital improvement projects are designed to modernize and improve mission capacity. Such capital improvement projects often result in unavoidable environmental impacts by increasing over-water structures, which results in a loss of subtidal habitat within industrial areas of Navy bases. In the Pacific Northwest, compensatory mitigation often targets alleviating impacts to Endangered Species Act-listed salmon species. The complexity of restoring large systems requires limited resources to target successful and more coordinated mitigation efforts to address habitat loss and improvements in water quality that will clearly contribute to an improvement at the site scale and can then be linkedmore » to a cumulative net ecosystem improvement.« less

Abiotic Earth - Establishing a Baseline for Earliest Life, Data from the Archean of Western Australia

NASA Technical Reports Server (NTRS)

Lindsay, J. F.; Brasier, M. D.; McLoughlin, N.; Green, O. R.; Fogel, M.; McNamara, K. M.; Steele, A.; Mertzman, S. A.

2003-01-01

Stromatolitic structures preserved at two stratigraphic levels within the 3.47-3.43 Ga Warrawoona Group of Western Australia have been interpreted as some of "the least controversial evidence of early life on earth" and "the oldest firmly established biogenic deposits now known from the geologic record". The structures were said to have formed in a shallow sub-tidal to intertidal setting as part of an evaporite succession. In an extensive field program we have re-evaluated exposures of the Strelley Pool Chert from which stromatolites have been described and carried out detailed mapping and sampling of the Strelley Pool West site 13.7 km west of the type locality. Data from our ongoing program cast considerable doubt on the biogenic origins of the stromatolitic structures and on the nature of their depositional setting.

High-resolution geophysical data from the inner continental shelf—Buzzards Bay, Massachusetts

USGS Publications Warehouse

Ackerman, Seth D.; Andrews, Brian D.; Foster, David S.; Baldwin, Wayne E.; Schwab, William C.

2012-01-01

The U.S. Geological Survey (USGS) and the Massachusetts Office of Coastal Zone Management (CZM) have cooperated to map approximately 410 square kilometers (km²) of the inner continental shelf in Buzzards Bay, Massachusetts. This report contains geophysical data collected by the USGS on three cruises conducted in 2009, 2010, and 2011, and additional bathymetry data collected by the National Oceanic and Atmospheric Administration in 2004. The geophysical data include (1) swath bathymetry using interferometric sonar and multibeam echosounder systems, (2) acoustic backscatter from sidescan sonar, and (3) seismic-reflection profiles from a chirp subbottom profiler. These spatial data support research on the Quaternary evolution of Buzzards Bay, the influence of sea-level change and sediment supply on coastal evolution, and efforts to understand the type, distribution, and quality of subtidal marine habitats in the coastal ocean of Massachusetts.

Marine benthic invertebrates from the Upper Jurassic of northern Ethiopia and their biogeographic affinities

NASA Astrophysics Data System (ADS)

Kiessling, Wolfgang; Kumar Pandey, Dhirendra; Schemm-Gregory, Mena; Mewis, Heike; Aberhan, Martin

2011-02-01

We present the first modern description of corals, brachiopods and bivalves from the Antalo Limestone in the Mekele Outlier of northern Ethiopia. This fauna is largely of Oxfordian age and lived in shallow subtidal environments and in small patch reefs. In combining our new data with fossil occurrence data from the Paleobiology Database, we conducted multidimensional scaling analyses to assess biogeographic patterns and the delineation of the Ethiopian Province for the Callovian to Kimmeridgian stages. Results suggest that an Ethiopian Province is indeed evident for our focal groups, but this is more confined than traditionally assumed. The so defined Ethiopian Province includes Tunisia, the Levant, Arabia and much of East Africa, but excludes Tanzania and India. The special status of India and Tanzania is perhaps due to latitudinal gradients in faunal composition.

Sedimentary environment and facies of St Lucia Estuary Mouth, Zululand, South Africa

NASA Astrophysics Data System (ADS)

Wright, C. I.; Mason, T. R.

The St. Lucia Estuary is situated on the subtropical, predominantly microtidal Zululand coast. Modern sedimentary environments within the estuary fall into three categories: (1) barrier environments; (2) abandoned channel environments; and (3) estuarine/lagoonal environments. The barrier-associated environment includes tidal inlet channel, inlet beach face, flood-tidal delta, ebb-tidal delta, spit, backspit and aeolian dune facies. The abandoned channel environment comprises washover fan, tidal creek tidal creek delta and back-barrier lagoon facies. The estuarine/lagoonal environment includes subtidal estuarine channel, side-attached bar, channel margin, mangrove fringe and channel island facies. Each sedimentary facies is characterised by sedimentary and biogenic structures, grain-size and sedimentary processes. Vertical facies sequences produced by inlet channel migration and lagoonal infilling are sufficiently distinct to be recognized in the geological record and are typical of a prograding shoreline.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jewett, S.C.; Dean, T.A.

Injuries to the shallow subtidal eelgrass community were observed in the heavily oiled portions of Western Prince William Sound following the Exxon Valdez oil spill. High PAH concentrations were associated with observed differences in communities at oiled vs. reference sites. Dominant taxa within the eelgrass community, including infaunal amphipods, infaunal bivalves, helmet crabs, and leather stars were less abundant at oiled than at reference sites in 1990. Other taxa, including several families of opportunistic or stress-tolerant infaunal polychaetes and gastropods, epifaunal polychaetes and mussels, and small cod, were more abundant at oiled sites. By 1995, there was apparent recovery ofmore » most community constituents. However, not all taxa had recovered fully. Some evidence of slight hydrocarbon contamination still existed at some sites, and three infaunal bivalves, two amphipods, a crab, and a sea star were still more abundant at reference sites than at oiled sites.« less

Bedform development and morphodynamics in mixed cohesive sediment substrates: the importance of winnowing and flocculation

NASA Astrophysics Data System (ADS)

Ye, Leiping; Parsons, Daniel; Manning, Andrew

2016-04-01

There remains a lack of process-based knowledge of sediment dynamics within flows over bedforms generated in complex mixtures of cohesionless sand and biologically-active cohesive muds in natural estuarine flow systems. The work to be presented forms a part of the UK NERC "COHesive BEDforms (COHBED)" project which aims to fill this gap in knowledge. Herein results from a field survey in sub-tidal zone of Dee estuary (NW, England) and a set of large-scale laboratory experiments, conducted using mixtures of non-cohesive sands, cohesive muds and Xanthan gum (as a proxy for the biological stickiness of Extracellular Polymeric Substances (EPS)) will be presented. The results indicate the significance of biological-active cohesive sediments in controlling winnowing rates and flocculation dynamics, which contributes significantly to rates of bedform evolution.

Cross-shore velocity shear, eddies and heterogeneity in water column properties over fringing coral reefs: West Maui, Hawaii

USGS Publications Warehouse

Storlazzi, C.D.; McManus, M.A.; Logan, J.B.; McLaughlin, B.E.

2006-01-01

A multi-day hydrographic survey cruise was conducted to acquire spatially extensive, but temporally limited, high-resolution, three-dimensional measurements of currents, temperature, salinity and turbidity off West Maui in the summer of 2003 to better understand coastal dynamics along a complex island shoreline with coral reefs. These data complement long-term, high-resolution tide, wave, current, temperature, salinity and turbidity measurements made at a number of fixed locations in the study area starting in 2001. Analyses of these hydrographic data, in conjunction with numerous field observations, evoke the following conceptual model of water and turbidity flux along West Maui. Wave- and wind-driven flows appear to be the primary control on flow over shallower portions of the reefs while tidal and subtidal currents dominate flow over the outer portions of the reefs and insular shelf. When the direction of these flows counter one another, which is quite common, they cause a zone of cross-shore horizontal shear and often form a front, with turbid, lower-salinity water inshore of the front and clear, higher-salinity water offshore of the front. It is not clear whether these zones of high shear and fronts are the cause or the result of the location of the fore reef, but they appear to be correlated alongshore over relatively large horizontal distances (orders of kilometers). When two flows converge or when a single flow is bathymetrically steered, eddies can be generated that, in the absence of large ocean surface waves, tend to accumulate material. Areas of higher turbidity and lower salinity tend to correlate with regions of poor coral health or the absence of well-developed reefs, suggesting that the oceanographic processes that concentrate and/or transport nutrients, contaminants, low-salinity water or suspended sediment might strongly influence coral reef ecosystem health and sustainability.

Microplastics in the aquatic and terrestrial environment: sources (with a specific focus on personal care products), fate and effects.

PubMed

Duis, Karen; Coors, Anja

2016-01-01

Due to the widespread use and durability of synthetic polymers, plastic debris occurs in the environment worldwide. In the present work, information on sources and fate of microplastic particles in the aquatic and terrestrial environment, and on their uptake and effects, mainly in aquatic organisms, is reviewed. Microplastics in the environment originate from a variety of sources. Quantitative information on the relevance of these sources is generally lacking, but first estimates indicate that abrasion and fragmentation of larger plastic items and materials containing synthetic polymers are likely to be most relevant. Microplastics are ingested and, mostly, excreted rapidly by numerous aquatic organisms. So far, there is no clear evidence of bioaccumulation or biomagnification. In laboratory studies, the ingestion of large amounts of microplastics mainly led to a lower food uptake and, consequently, reduced energy reserves and effects on other physiological functions. Based on the evaluated data, the lowest microplastic concentrations affecting marine organisms exposed via water are much higher than levels measured in marine water. In lugworms exposed via sediment, effects were observed at microplastic levels that were higher than those in subtidal sediments but in the same range as maximum levels in beach sediments. Hydrophobic contaminants are enriched on microplastics, but the available experimental results and modelling approaches indicate that the transfer of sorbed pollutants by microplastics is not likely to contribute significantly to bioaccumulation of these pollutants. Prior to being able to comprehensively assess possible environmental risks caused by microplastics a number of knowledge gaps need to be filled. However, in view of the persistence of microplastics in the environment, the high concentrations measured at some environmental sites and the prospective of strongly increasing concentrations, the release of plastics into the environment should be reduced in a broad and global effort regardless of a proof of an environmental risk.

Latitudinal discontinuity in thermal conditions along the nearshore of central-northern Chile.

PubMed

Tapia, Fabian J; Largier, John L; Castillo, Manuel; Wieters, Evie A; Navarrete, Sergio A

2014-01-01

Over the past decade, evidence of abrupt latitudinal changes in the dynamics, structure and genetic variability of intertidal and subtidal benthic communities along central-northern Chile has been found consistently at 30-32°S. Changes in the advective and thermal environment in nearshore waters have been inferred from ecological patterns, since analyses of in situ physical data have thus far been missing. Here we analyze a unique set of shoreline temperature data, gathered over 4-10 years at 15 sites between 28-35°S, and combine it with satellite-derived winds and sea surface temperatures to investigate the latitudinal transition in nearshore oceanographic conditions suggested by recent ecological studies. Our results show a marked transition in thermal conditions at 30-31°S, superimposed on a broad latitudinal trend, and small-scale structures associated with cape-and-bay topography. The seasonal cycle dominated temperature variability throughout the region, but its relative importance decreased abruptly south of 30-31°S, as variability at synoptic and intra-seasonal scales became more important. The response of shoreline temperatures to meridional wind stress also changed abruptly at the transition, leading to a sharp drop in the occurrence of low-temperature waters at northern sites, and a concurrent decrease in corticated algal biomass. Together, these results suggest a limitation of nitrate availability in nearshore waters north of the transition. The localized alongshore change results from the interaction of latitudinal trends (e.g., wind stress, surface warming, inertial period) with a major headland-bay system (Punta Lengua de Vaca at 30.25°S), which juxtaposes a southern stretch of coast characterized by upwelling with a northern stretch of coast characterized by warm surface waters and stratification. This transition likely generates a number of latitude-dependent controls on ecological processes in the nearshore that can explain species-specific effects, and add strength to the suggestion of an oceanography-driven, major spatial transition in coastal communities at 30-31°S.

Geology of the north end of the Ruby Range, southwestern Montana

USGS Publications Warehouse

Tysdal, Russell G.

1970-01-01

This study consists of two parts: stratigraphy and sedimentation, and structure of rocks in the northern one-third of the Ruby Range of southwestern Montana. Detailed studies of Cambrian marine dolomite rocks in the Red Lion Formation and in the upper part of the Pilgrim Limestone resulted in their division into distinct rock units, termed lithofacies. These lithofacies contain features suggestive of subtidal, intertidal, and supratidal environments similar to those presently forming in the Persian Gulf. Stromatolltic structures occurring in the uppermost part of the Red Lion Formation are similar to those presently forming in Shark Bay, Australia. The Ruby Range within the map area is broken into a series of northwest-plunging basement (Precambrian metamorphic rock) blocks, differentially uplifted during the Cretaceous-Tertiary orogenic period. These blocks are bordered by upthrust faults, which are nearly vertical in their lower segments and are .low-angle in their uppermost parts. Asymmetrical folds in Paleozoic sedimentary rocks formed in response to the differential uplift of the blocks; thus they too plunge to the northwest. Displaced masses of rock border the range on the three sides within the map area and are interpreted as gravity-slide features resulting from uplift of the range. Normal faulting began blocking out the present range margins by Oligocene time.

Size Matters: The Contribution of Mega-Infauna to the Food ...

EPA Pesticide Factsheets

Large-bodied, invertebrates are common to infaunal communities of NE Pacific estuaries (e.g., bivalves, polychaetes, burrowing shrimps), but their contribution to the ecological structure, function and ecosystem services of most estuaries has been poorly characterized because they are difficult to sample and quantify. In a study of Yaquina estuary (Oregon) food webs, particular effort was made to quantify intertidal and subtidal mega-infauna using suction-excavated 40-cm diameter corers in addition to conventional sampling of macro-infauna. Additionally, the abundance and biomass of all floral and other faunal guilds (except microbial and mammalian guilds) were directly quantified or estimated from published studies, carbon and nitrogen stable isotopes were measured for abundant species, and inverse analysis was used to generate models of carbon flow within food webs of the lower and upper reaches of Yaquina estuary. Benthic invertebrates dominated the biomass and respiration among faunal guilds in both estuarine reaches, whereas biomass and respiration of birds and fish were two orders-of-magnitude smaller. Mega-infauna, particularly intertidal burrowing shrimps and bivalves, constituted most of the benthic invertebrate biomass, respiration and secondary production in both reaches, although only a small fraction of the total infaunal abundance. Mega-infauna were dominant consumers of phytoplankton, major contributors of carbon to sediment organic matter, a

Lipophilic pigments from cyanobacterial (blue-green algal) and diatom mats in Hamelin Pool, Shark Bay, Western Australia

NASA Technical Reports Server (NTRS)

Palmisano, A. C.; Summons, R. E.; Cronin, S. E.; Des Marais, D. J.

1989-01-01

Lipophilic pigments were examined in microbial mat communities dominated by cyanobacteria in the intertidal zone and by diatoms in the subtidal and sublittoral zones of Hamelin Pool, Shark Bay, Western Australia. These microbial mats have evolutionary significance because of their similarity to lithfied stromatolites from the Proterozoic and Early Paleozoic eras. Fucoxanthin, diatoxanthin, diadinoxanthin, beta-carotene, and chlorophylls a and c characterized the diatom mats, whereas cyanobacterial mats contained myxoxanthophyll, zeaxanthin, echinenone, beta-carotene, chlorophyll a and, in some cases, sheath pigment. The presence of bacteriochlorophyll a within the mats suggest a close association of photosynthetic bacteria with diatoms and cyanobacteria. The high carotenoids : chlorophyll a ratios (0.84-2.44 wt/wt) in the diatom mats suggest that carotenoids served a photoprotective function in this high light environment. By contrast, cyanobacterial sheath pigment may have largely supplanted the photoprotective role of carotenoids in the intertidal mats.

Fifth Annual Report: 2008 Pre-Construction Eelgrass Monitoring and Propagation for King County Outfall Mitigation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woodruff, Dana L.; Judd, Chaeli; Thom, Ronald M.

2010-01-01

This is the fifth and final report in a series documenting progress of the pre-construction eelgrass restoration and mitigation activities for the proposed King County Brightwater marine outfall, discharging to Puget Sound near Point Wells, Washington. King County began implementing a multiyear eelgrass monitoring and restoration program in 2004, with the primary goal of returning intertidal and shallow subtidal habitat and eelgrass to pre-construction conditions, after construction of the outfall. Major eelgrass mitigation program elements include: a) pre-construction monitoring, i.e., documenting initial eelgrass conditions and degree of fluctuation over a 5 year period prior to construction, b) eelgrass transplanting, includingmore » harvesting, offsite propagation and stockpiling of local plants for post-construction planting, and c) post-construction planting and subsequent monitoring, occurring in 2009 and beyond. The overall program is detailed in the Eelgrass Restoration and Biological Resources Implementation Workplan (King County 2008).« less

Geophysical and sampling data from the inner continental shelf: Duxbury to Hull, Massachusetts

USGS Publications Warehouse

Barnhardt, Walter A.; Ackerman, Seth D.; Andrews, Brian D.; Baldwin, Wayne E.

2010-01-01

The U.S. Geological Survey (USGS) and the Massachusetts Office of Coastal Zone Management (CZM) have cooperated to map approximately 200 km² of the Massachusetts inner continental shelf between Duxbury and Hull. This report contains geophysical and geological data collected by the USGS on three cruises between 2006 and 2007. These USGS data are supplemented with a National Oceanic and Atmospheric Administration (NOAA) hydrographic survey conducted in 2003 to update navigation charts. The geophysical data include (1) swath bathymetry from interferometric sonar and multibeam echosounders, (2) acoustic backscatter from sidescan sonar and multibeam echosounders, and (3) subsurface stratigraphy and structure from seismic-reflection profilers. The geological data include sediment samples, seafloor photographs, and bottom videos. These spatial data support research on the influence sea-level change and sediment supply have on coastal evolution, and on efforts to understand the type, distribution, and quality of subtidal marine habitats in the Massachusetts coastal ocean.

Distribution of subtidal sedimentary bedforms in a macrotidal setting: The Bay of Fundy, Atlantic Canada

NASA Astrophysics Data System (ADS)

Todd, Brian J.; Shaw, John; Li, Michael Z.; Kostylev, Vladimir E.; Wu, Yongsheng

2014-07-01

The Bay of Fundy, Canada, a large macrotidal embayment with the World's highest recorded tides, was mapped using multibeam sonar systems. High-resolution imagery of seafloor terrain and backscatter strength, combined with geophysical and sampling data, reveal for the first time the morphology, architecture, and spatial relationships of a spectrum of bedforms: (1) flow-transverse bedforms occur as both discrete large two-dimensional dunes and as three-dimensional dunes in sand sheets; (2) flow-parallel bedforms are numerous straight ridges described by others as horse mussel bioherms; (3) sets of banner banks that flank prominent headlands and major shoals. The suite of bedforms developed during the Holocene, as tidal energy increased due to the bay approaching resonance. We consider the evolution of these bedforms, their migration potential and how they may place limitations on future in-stream tidal power development in the Bay of Fundy.

Suggested nomenclature change and new reference locality for Dequeen Formation, Pike County, Arkansas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ham, T.L.; Landry, R.J.

1983-09-01

The DeQueen Formation of the Trinity Group, Comanchean Cretaceous, crops out in southwestern Arkansas and southeastern Oklahoma. The outcrop, located in the Highland gypsum quarry of Pike County, southwestern Arkansas, is described in detail in this paper and presented as a reference locality. Data from the locality provide the basis for a nomenclature change from the DeQueen Limestone Member to the DeQueen Formation. The formation consists of 64.23% clastic sediments, 24.72% gypsum, and 11.05% limestone. Hopper salt casts, ripple marks, scattered pyrite and marcasite nodules, celestite, and chickenwire gypsum can also be found. The DeQueen Formation is underlain by claysmore » and the Ultima Thule Gravel lentil, while the top is unconformably overlain by Upper Cretaceous Tokio gravels. The general paleoenvironment represents a normally low-energy subtidal environment ranging from brackish to normal to hypersaline waters in a lagoonal setting that shallows upward.« less

Evidence of tidal processes from the lower part of the Witwatersrand Supergroup, South Africa

NASA Astrophysics Data System (ADS)

Eriksson, Kenneth A.; Turner, Brian R.; Vos, Richard G.

1981-08-01

A 1600-m succession of quartz arenites and associated shaley deposits comprising the Hospital Hill Subgroup at the base of the Witwatersrand Supergroup is considered to have been deposited largely under the influence of tidal processes. Facies analysis indicates that deposition occurred in the following environments: (1) marine shalf; (2) shallow subtidal to intertidal; (3) intertidal flat; and (4) tidal inlet. The presence of strong tidal currents implies that the Witwatersrand Basin was open to an ocean basin, at least during the early stages of its evolution. Palaeocurrent trends and isopach data suggest that this probably lay to the southwest, an area now occupied by the high grade Natal—Namaqua metamorphic belt. The contrast between the supermature quartz arenites of the Hospital Hill Subgroup and the overlying gold-bearing immature subgreywackes, feldspathic quartzites and conglomerates of fluvial origin is believed to be a function of tidal reworking of sediments.

Anti-biofilm effect of a butenolide/polymer coating and metatranscriptomic analyses.

PubMed

Ding, Wei; Ma, Chunfeng; Zhang, Weipeng; Chiang, Hoyin; Tam, Chunkit; Xu, Ying; Zhang, Guangzhao; Qian, Pei-Yuan

2018-01-01

Butenolide is an environmentally friendly antifouling natural product, but its efficiency and mechanism in preventing biofilm formation have not been examined. Furthermore, controlling the release of butenolide from paints into seawater is technically challenging. A coating was developed by mixing butenolide with a biodegradable polymer, poly (ε-caprolactone)-based polyurethane, and a one-month in situ anti-biofilm test was conducted in a subtidal area. The constant release of butenolide from the surface suggested that its release was well controlled. Direct observation and confocal microscope investigation indicated that the coating was effective against both biofilm formation and attachment of large fouling organisms. Metatranscriptomic analysis of biofilm samples implied that the coating selectively inhibited the adhesion of microbes from a variety of phyla and targeted particular functional pathways including energy metabolism, drug transport and toxin release. These integrated analyses demonstrated the potential application of this butenolide/polymer coating as an anti-biofilm material.

Sea otter studies in Glacier Bay National Park and Preserve

USGS Publications Warehouse

Bodkin, James L.; Kloecker, Kimberly A.; Esslinger, George G.; Monson, Daniel H.; DeGroot, J.D.; Doherty, J.

2002-01-01

Following translocations to the outer coast of Southeast Alaska in 1965, sea otters have been expanding their range and increasing in abundance. We began conducting surveys for sea otters in Cross Sound, Icy Strait, and Glacier Bay, Alaska in 1994, following initial reports (in 1993) of their presence in Glacier Bay. Since 1995, the number of sea otters in Glacier Bay proper has increased from around 5 to more than 1500. Between 1993 and 1997 sea otters were apparently only occasional visitors to Glacier Bay, but in 1998 long-term residence was established as indicated by the presence of adult females and their dependent pups. Sea otter distribution is limited to the Lower Bay, south of Sandy Cove, and is not continuous within that area. Concentrations occur in the vicinity of Sita Reef and Boulder Island and between Pt. Carolus and Rush Pt. on the west side of the Bay (Figure 1). We describe the diet of sea otters during 2001 in Glacier Bay based on visual observations of prey during 456 successful forage dives. In Glacier Bay, diet consisted of 62% clam, 15% mussel, 9% crab, 7% unidentified, 4& urchins, and 4% other. Most prey recovered by sea otters are commercially, socially, or ecologically important species. Species of clam include Saxidomus gigantea, Protothaca staminea, and Mya truncata. Urchins are primarily Strongylocentrotus droebachiensis and the mussel is Modiolus modiolus. Crabs include species of three genera: Cancer, Chinoecetes, and Telmessus. Although we characterize diet at broad geographic scales, we found diet to vary between sites separated by as little as several hundred meters. Dietary variation among and within sites can reflect differences in prey availability and individual specialization. We estimated species composition, density, biomass, and sizes of subtidal clams, urchins, and mussels at 9 sites in lower Glacier Bay. All sites were selected based on the presence of abundant clam siphons. Sites were not selected to allow inference to any area larger than the sampling area (approx 400 m^2). Sites were selected to achieve a broad geographic sample of dense subtidal clam beds within Glacier Bay prior to occupation and foraging by sea otters. There was no direct evidence of otter foraging at any of our clam sampling sites. We sampled 11,568 bivalves representing 14 speces of clam and 2 species of mussel. We sampled 4,981 urchins, all Strongylocentrotus droeobachiensis. Only four species of clam (littleneck clams, Protothaca staminea; butter clams, Saxidomus gigantea; soft-shell claims, Mya truncata; and Macoma sp.) accounted for 91.6% of all clams sampled. Mean total clam density (#/0.25 m^2) across the 9 sites was 62.3. Densities (and se ) of P. staminea averaged 22.6 (1.6) and ranged from 0 to 97. Densities of S. gigantea averaged 14.4 (1.0) and ranged from 0 to 63. Densities of Macoma sp. averaged 14.5 (1.2) and ranged from 0 to 78. Densities of S. droebachiensis averaged 27.3 (1.7) and ranged from 0 to 109. Mean S. droebachiensis sizes ranged from 16 to 30 mm by site. Mean P. staminea sizes ranged from 30 to 53 mm, mean S. gigantea sizes ranged from 51 to 85 mm, and mean Macoma sp. sizes ranged from 14 to 19 mm. Although not the most abundant clam, S. gigantea contributed the greatest proportion to total clam biomass (63%), followed by P. staminea (24%). Sea otters are now well established in limited areas of the lower portions of Glacier Bay. It is likely that distribution and numbers of sea otters will continue to increase in Glacier Bay in the near future. Glacier Bay supports large and diverse populations of clams that are largely unexploited by sea otters presently. It is predictable that the density and sizes of clam populations will decline in response to otter predation. This will result in fewer opportunities for human harvest, but will also trigger ecosystem level changes, as prey for other predators, such as octopus, sea stars, fishes, birds and mammals are modified. Sea ott

Shallow-water stenopodidean and caridean shrimps from Abrolhos Archipelago, Brazil: new records and updated checklist.

PubMed

Soledade, Guidomar O; Fonseca, Mytalle S; Almeida, Alexandre O

2015-01-09

This study deals with a recent collection of stenopodidean and caridean shrimps made in the Abrolhos Archipelago, Bahia, Brazil, in July and August 2013. Sampling was carried out in the vicinity of Ilha de Santa Bárbara (17°57'49"S 38°41'53"W). Specimens were obtained by hand or using small hand nets in tide pools or under rocks in the intertidal zone. Part of the material was collected by scuba diving in the shallow subtidal, to a maximum depth of 11 m. We obtained a total of 18 species, 12 of which are reported for the first time for the Abrolhos and 4 as new records for the state of Bahia. The distributions of Microprosthema semilaeve (von Martens, 1872), Typton gnathophylloides Holthuis, 1951, Alpheus verrilli (Schmitt, 1924) and Alpheopsis cf. trigona (Rathbun, 1901) are extended from their previously known ranges. The occurrence of Automate cf. rectifrons Chace, 1972 on the Brazilian coast is confirmed. We thus provide an updated checklist of stenopodidean (2 species) and caridean (29 species) shrimps from the Abrolhos Archipelago, incorporating and critically evaluating previous records. 

Spatiotemporal Distribution and Population Structure of Monokalliapseudes schubarti (Tanaidacea: Kalliapseudidae) in an Estuary in Southern Brazil

PubMed Central

Freitas-Júnior, Felipe; Christoffersen, Martin Lindsey; de Araújo, Joafrâncio Pereira; Branco, Joaquim Olinto

2013-01-01

Monokalliapseudes schubarti is an endemic tanaidacean microcrustacean from southeastern Brazil to Uruguay inhabiting low energy estuaries. Saco da Fazenda is located in the estuary of the Itajaí-Açú River, state of Santa Catarina, Brazil. It is exposed to strong anthropic impact and receives intensive flows of domestic wastewater, solid residues, and drainage activities. Specimens of M. schubarti were collected monthly, in the intertidal and subtidal regions of Saco da Fazenda, in four stations defined as a function of the physiography of the environment during the period of July 2003 to June 2004. Fecundity values were high, with continuous reproductive activity during the whole period of study. The greatest population densities were observed in the intertidal region, where they are nevertheless intensely consumed by birds, swimming crabs, and fish. This species represents a fundamental link in the food chain of Saco da Fazenda, transferring energy from the detritus level to higher trophic levels. Habitat disturbance and high organic matter may represent factors controlling the distribution of populations of M. schubarti. For this reason, the species may be used to monitor anthropic effects in estuarine areas. PMID:24298211

New Lower Mississippian Trilobites from the Chouteau Group of Missouri

USGS Publications Warehouse

Brezinski, D.K.

2000-01-01

Reexamination of existing trilobite collections from the Kinderhookian (Lower Mississippian) Chouteau Group of central and northeastern Missouri indicates that two different suites of trilobites are present in these two areas of the state. Moreover, the study of these collections has led to the erection of a new genus and four new species. The new genus, Ameropiltonia, is based on a new species, A. lauradanae. This genus and species is commonly confused with Breviphillipsia sampsoni (Vogdes). Elliptophillipsia rotundus, n. sp., differs from the type species of this genus by possessing a rounded frontal lobe to the glabella. The other new species, Perexigupyge chouteauensis and Richterella hessleri, are present in the Compton Limestone of Marion and Ralls counties of northeastern Missouri. Variations in trilobite species found in the Compton Limestone of central Missouri and the northeastern part of the state are interpreted to be environmentally related. It appears that the lime mudstone and wackestone lithologies characteristic of the Compton Limestone of central Missouri were deposited in a low-energy, subtidal shelf setting. The lime packstone-grainstone strata of northeastern Missouri are interpreted to have formed as a tidal sand belt on the eastern margin of the Burlington shelf.

Combining morphometrics with molecular taxonomy: how different are similar foliose keratose sponges from the Australian tropics?

PubMed

Abdul Wahab, M A; Fromont, J; Whalan, S; Webster, N; Andreakis, N

2014-04-01

Sponge taxonomy can be challenging as many groups exhibit extreme morphological plasticity induced by local environmental conditions. Foliose keratose sponges of the sub-family Phyllospongiinae (Dictyoceratida, Thorectidae: Strepsichordaia, Phyllospongia and Carteriospongia) are commonly found in intertidal and subtidal habitats of the Indo-Pacific. Lacking spicules, these sponges can be difficult to differentiate due to the lack of reliable morphological characters for species delineation. We use molecular phylogenies inferred from the nuclear Internal Transcribed Spacer 2 region (ITS2) and morphometrics (19 characters; 52 character states) to identify evolutionarily significant units (ESUs; sensu Moritz) within foliose Phyllosponginiids collected from seven geographic locations across tropical eastern and Western Australia. The ITS2 topology was congruent with the tree derived from Bayesian inference of discrete morphological characters supporting expected taxonomic relationships at the genus level and the identification of five ESUs. However, phylogenies inferred from the ITS2 marker revealed multiple sequence clusters, some of which were characterised by distinct morphological features and specific geographic ranges. Our results are discussed in light of taxonomic incongruences within this study, hidden sponge diversity and the role of vicariant events in influencing present day distribution patterns. Copyright © 2014 Elsevier Inc. All rights reserved.

Burial Duration and Frequency Influences Resilience of Differing Propagule Types in a Subtidal Seagrass, Posidonia australis

PubMed Central

2016-01-01

Sedimentation that leads to periodic, and often prolonged, burial events is becoming more common on the world’s coastlines as human populations expand and create urbanised marine environments. Different seagrass species react differently to sediment burial but many species in the southern hemisphere are yet to be examined. How seagrasses react to burial has restoration implications. There is a need to critically assess seagrass transplant propagule responses to periodic (pulse) and prolonged (press) burial events before selecting the most appropriate species, transplant propagule, and transplant site. In my study, mesocosm experiments, coupled with field measurements were used to assess how sexual (seedlings) and vegetative (sprigs) propagules of Posidonia australis responded to pulse and press burial events. Seedlings were highly susceptible to burial (both pulse and press), with no survival at the end of the experimental period. In contrast, rhizome growth in vegetative propagules was stimulated by pulse burial, although press burial events resulted in mortality. The implication for Posidonia australis restoration efforts in areas where burial is periodic, was that vegetative propagules are optimal transplant units, in comparison to seedlings. Press burial however, renders a transplant site sub-optimal for both seedling and sprig transplants. PMID:27526020

Tropical Cyclone-Driven Sediment Dynamics Over the Australian North West Shelf

NASA Astrophysics Data System (ADS)

Dufois, François; Lowe, Ryan J.; Branson, Paul; Fearns, Peter

2017-12-01

Owing to their strong forcing at the air-sea interface, tropical cyclones are a major driver of hydrodynamics and sediment dynamics of continental shelves, strongly impacting marine habitats and offshore industries. Despite the North West Shelf of Australia being one of the most frequently impacted tropical cyclone regions worldwide, there is limited knowledge of how tropical cyclones influence the sediment dynamics of this shelf region, including the significance of these episodic extreme events to the normal background conditions that occur. Using an extensive 2 year data set of the in situ sediment dynamics and 14 yearlong calibrated satellite ocean-color data set, we demonstrate that alongshore propagating cyclones are responsible for simultaneously generating both strong wave-induced sediment resuspension events and significant southwestward subtidal currents. Over the 2 year study period, two particular cyclones (Iggy and Narelle) dominated the sediment fluxes resulting in a residual southwestward sediment transport over the southern part of the shelf. By analyzing results from a long-term (37 year) wind and wave hindcast, our results suggest that at least 16 tropical cyclones had a strong potential to contribute to that southwestward sediment pathway in a similar way to Iggy and Narelle.

An empirical examination of consumer effects across twenty degrees of latitude.

PubMed

Lavender, James T; Dafforn, Katherine A; Bishop, Melanie J; Johnston, Emma L

2017-09-01

The strength and importance of consumer effects are predicted to increase toward low latitudes, but this hypothesis has rarely been tested using a spatially consistent methodology. In a consumer-exclusion experiment spanning twenty degrees of latitude along the east Australian coast, the magnitude of consumer effects on sub-tidal sessile assemblage composition was not greater at low than high latitudes. Across caged and control assemblages, Shannon's diversity, Pielou's evenness, and richness of functional groups decreased with increasing latitude, but the magnitude of consumer effects on these metrics did not display consistent latitudinal gradients. Instead, latitudinal gradients in consumer effects were apparent for individual functional groups. Solitary ascidians displayed the pattern consistent with predictions of greater direct effects of predators at low than high latitude. As consumers reduced the biomass of this and other competitive dominants, groups less prone to predation (e.g., hydroids, various groups of bryozoans) were able to take advantage of freed space in the presence of consumers and show increased abundances there. This large-scale empirical study demonstrates the complexity of species interactions, and the failure of assemblage-level metrics to adequately capture consumer effects over large spatial gradients. © 2017 by the Ecological Society of America.

Chemical fingerprinting applied to the evaluation of marine oil pollution in the coasts of Canary Islands (Spain).

PubMed

Peña-Méndez, E M; Astorga-España, M S; García-Montelongo, F J

2001-01-01

Chemical fingerprinting approach to environmental assessment is illustrated in the evaluation of marine oil pollution in the coasts using two limpet species as bioindicator organisms, and based on profiles and concentrations of n-alkanes and aromatic hydrocarbons in their tissues. Accidental and chronic releases of hydrocarbons can contaminate the marine environment of the Canary Islands not only because of their geographical situation but also because of the very dense tanker traffic around. This situation affects coastal areas, fishing activities, tourism resort, etc. Concentrations of n-alkanes and aromatic hydrocarbons (polycyclic aromatic hydrocarbons and methyl-polycyclic aromatic hydrocarbons) in the soft tissues of the marine intertidal and subtidal limpets, Patella crenata and Patella ullysiponensis aspera, were evaluated. Limpet samples were collected at monthly intervals, at three locations on the southeast coast of Tenerife over a 3-year period (1991-93). Levels of hydrocarbons found in limpets are similar to concentrations found in unpolluted areas around the world. From application of principal component analysis, the interpretation of variable loading plots gives information on variable correlation and can be used to distinguish among potential sources of pollution and the ability of studied molluscs to be used as bioindicator organisms.

Pollutant tracking for 3 Western North Atlantic sea grasses by remote sensing: Preliminary diminishing white light responses of Thalassia testudinum, Halodule wrightii, and Zostera marina.

PubMed

Thorhaug, Anitra; Berlyn, Graeme P; Poulos, Helen M; Goodale, Uromi M

2015-08-15

Sea grasses are foundation species for estuarine ecosystems. The available light for sea grasses diminishes rapidly during pollutant spills, effluent releases, disturbances such as intense riverine input, and tidal changes. We studied how sea grasses' remote-sensing signatures and light-capturing ability respond to short term light alterations. In vivo responses were measured over the entire visible-light spectra to diminishing white-light on whole-living-plants' spectral reflectance, including 6h of full oceanic-light fluences from 10% to 100%. We analyzed differences by various reflectance indices. We compared the sea grasses species responses of tropical vs. temperate and intertidals (Halodule wrightii, and Zostera marina) vs. subtidal (Thalassia testudinum). Reflectance diminished with decreasing light intensity that coincided with greater accessory pigment stimulation (anthocyanin, carotenoids, xanthins). Chlorophyll a and Chlorophyll b differed significantly among species (Thalassia vs. Halodule). Photosynthetic efficiency diminished at high light intensities. The NDVI index was inadequate to perceive these differences. Our results demonstrate the leaf-level utility of data to remote sensing for mapping sea grass and sea grass stress. Copyright © 2015 Elsevier Ltd. All rights reserved.

Littoral lichens as a novel source of potentially bioactive Actinobacteria.

PubMed

Parrot, Delphine; Antony-Babu, Sanjay; Intertaglia, Laurent; Grube, Martin; Tomasi, Sophie; Suzuki, Marcelino T

2015-10-30

Cultivable Actinobacteria are the largest source of microbially derived bioactive molecules. The high demand for novel antibiotics highlights the need for exploring novel sources of these bacteria. Microbial symbioses with sessile macro-organisms, known to contain bioactive compounds likely of bacterial origin, represent an interesting and underexplored source of Actinobacteria. We studied the diversity and potential for bioactive-metabolite production of Actinobacteria associated with two marine lichens (Lichina confinis and L. pygmaea; from intertidal and subtidal zones) and one littoral lichen (Roccella fuciformis; from supratidal zone) from the Brittany coast (France), as well as the terrestrial lichen Collema auriforme (from a riparian zone, Austria). A total of 247 bacterial strains were isolated using two selective media. Isolates were identified and clustered into 101 OTUs (98% identity) including 51 actinobacterial OTUs. The actinobacterial families observed were: Brevibacteriaceae, Cellulomonadaceae, Gordoniaceae, Micrococcaceae, Mycobacteriaceae, Nocardioidaceae, Promicromonosporaceae, Pseudonocardiaceae, Sanguibacteraceae and Streptomycetaceae. Interestingly, the diversity was most influenced by the selective media rather than lichen species or the level of lichen thallus association. The potential for bioactive-metabolite biosynthesis of the isolates was confirmed by screening genes coding for polyketide synthases types I and II. These results show that littoral lichens are a source of diverse potentially bioactive Actinobacteria.

Littoral lichens as a novel source of potentially bioactive Actinobacteria

PubMed Central

Parrot, Delphine; Antony-Babu, Sanjay; Intertaglia, Laurent; Grube, Martin; Tomasi, Sophie; Suzuki, Marcelino T.

2015-01-01

Cultivable Actinobacteria are the largest source of microbially derived bioactive molecules. The high demand for novel antibiotics highlights the need for exploring novel sources of these bacteria. Microbial symbioses with sessile macro-organisms, known to contain bioactive compounds likely of bacterial origin, represent an interesting and underexplored source of Actinobacteria. We studied the diversity and potential for bioactive-metabolite production of Actinobacteria associated with two marine lichens (Lichina confinis and L. pygmaea; from intertidal and subtidal zones) and one littoral lichen (Roccella fuciformis; from supratidal zone) from the Brittany coast (France), as well as the terrestrial lichen Collema auriforme (from a riparian zone, Austria). A total of 247 bacterial strains were isolated using two selective media. Isolates were identified and clustered into 101 OTUs (98% identity) including 51 actinobacterial OTUs. The actinobacterial families observed were: Brevibacteriaceae, Cellulomonadaceae, Gordoniaceae, Micrococcaceae, Mycobacteriaceae, Nocardioidaceae, Promicromonosporaceae, Pseudonocardiaceae, Sanguibacteraceae and Streptomycetaceae. Interestingly, the diversity was most influenced by the selective media rather than lichen species or the level of lichen thallus association. The potential for bioactive-metabolite biosynthesis of the isolates was confirmed by screening genes coding for polyketide synthases types I and II. These results show that littoral lichens are a source of diverse potentially bioactive Actinobacteria. PMID:26514347

The impact of coastal defence structures (tetrapods) on decapod crustaceans in the southern North Sea.

PubMed

Wehkamp, Stephanie; Fischer, Philipp

2013-12-01

Although the use of coastal defence structures is expected to increase, little is known about the ecological impact of such structures on the natural environment. In particular, the temporal and spatial patterns of communities in association with artificial substrate are still poorly understood. This study examined possible effects of experimental tetrapod fields on the decapod crustacean community in a subtidal hard-bottom area in the southern North Sea. We performed in situ studies in the fields and along transects oriented away from the tetrapod fields. Species composition and abundances were assessed before and after the introduction of the artificial material. The study revealed a significant decrease of smaller, less vagile species (Pisidia longicornis, Pilumnus hirtellus, Galathea squamifera) over the entire study area in the years following the tetrapod introduction. For 2 species, Hyas araneus and Homarus gammarus, the tetrapods appeared to be highly attractive as habitat and shelter because their abundance increased over time. No distinct spatial or temporal effects were observed for mobile predatory crabs, such as Cancer pagurus and Liocarcinus spp. The results of the study demonstrate that possible effects of artificial structures on macro-invertebrates in temperate hard-bottom areas are highly species-specific and depend on the size, lifestyle and ecological requirements of the species. This work highlights the importance of long-term studies. Our findings clearly indicate that more time is needed to distinguish between natural and anthropogenic influences on species distributions. Copyright © 2013 Elsevier Ltd. All rights reserved.

Spatiotemporal sedimentological and petrophysical characterization of El Gueria reservoir (Ypresian) in sFAX and Gulf of Gabes Basins (SE-Tunisia)

NASA Astrophysics Data System (ADS)

Nadhem, Kassabi; Zahra, Njahi; Ménendez, Béatriz; Salwa, Jeddi; Jamel, Touir

2017-06-01

El Gueria carbonate Formation (Ypresian) in Tunisia is a proven hydrocarbon reservoir. In the Gulf of Gabes, El Gueria reservoir consists mainly of a nummulitic limestone which is developed in an inner shelf environment. In order to characterize the depositional facies evolution and the petrophysical parameters, and to understand the origin of heterogeneity of El Gueria reservoir, we firstly conducted a sedimentological and a sequence stratigraphy study of this Formation in more than 10 wells especially in P1, then we established a detailed petrophysical study of El Gueria reservoir in P1, P3c and P7d cores. Based on lithostratigraphic and gamma ray correlations of an important number of wells in the study area, a detailed sedimentological study has been established. This latter shows that: (i): The Ypresien deposits are deposited in an inner shelf (El Gueria Formation) in the south and in an outer shelf (Boudabbous Formation) in the north of the study area with the form of horsts and grabens, (ii): 3 distinct members and 7 principal facies within El Gueria Formation have been distinguished. The coupling of data logging and data of the P1 core shows that the El Gueria deposits include 10 transgressive-regressive depositional sequences, while showing from bottom to top a broad regressive tendancy from a subtidal domain during the early Ypresian to an intertidal domain during the middle Ypresian reaching the supratidal environnement during the late Ypresian-early Lutetian. The petrophysical parameters (porosity and permeability) of El Gueria reservoir vary in time and space (laterally and vertically variation) following the deposit environment variation. Particularly, the porosity variation is controlled by eustatic cycles so that high porosities are linked with transgressive phases and low porosities with regressive phases. In addition, the vertical evolution of porosity through the El Gueria reservoir varies following the (i) deposit environments, (ii) type and morphology of nummulites such as large nummulites are more porous than small nummulites and nummilithoclastes (iii) matrix and cement such as micrite are more porous than sparite (iv) microfacies and diagenetic structures (Fractures, stylolithic seals …) such as the fractured wackstone are the most porous and permeable.

Atmospheric and tidal forcing of the exchange between Prince William Sound and the Gulf of Alaska

NASA Astrophysics Data System (ADS)

Halverson, Mark J.

2014-03-01

Current meter data from a series of oceanographic moorings spanning a total of five years was analyzed to quantify the tidal and subtidal exchange of water between Prince William Sound and the adjacent continental shelf in the northern Gulf of Alaska. Velocity profiles were used to quantify the exchange in terms of a transport through each of the two largest passages: Montague Strait and Hinchinbrook Entrance. Buoy wind and atmospheric pressure observations, as well as bottom pressure records, are then used to elucidate the role of atmospheric forcing on the exchange. An EOF analysis shows that the barotropic component accounts for 62% or more of the variance in the velocity profiles even after tides are removed by low-pass filtering, and thus the analysis is concerned primarily with depth-integrated transport. The estimated depth-integrated transport can reach ±0.6 Sv in Montague Strait, and ±1.5 Sv in Hinchinbrook Entrance. The largest fluctuations occur in response to the semidiurnal tides. Transport variations on subtidal time scales, which can reach -0.2 Sv in Montague Strait, and +0.6 Sv in Hinchinbrook Entrance, are shown by a frequency domain analysis to be dominated by easterly wind stress events which occur at periods of 2-5 days in both summer and winter. Atmospheric pressure has much less impact on transport, but there is some evidence that it might play a small role on time scales of a few weeks. Bottom pressure records suggest that easterly wind events set up a sea level height gradient in Hinchinbrook Entrance such that it tilts up to the east, which under geostrophy drives a barotropic flow into Prince William Sound. The same winds also raise the sea level in Hinchinbrook Entrance relative to Montague Strait, encouraging an outflow there in agreement with the ADCP observations. There is no evidence that the wind drives a vertically sheared bi-directional flow in either entrance, as has been observed in some estuaries. It is hypothesized that the lack of such a flow is possible because Prince William Sound has two major connections to the shelf, which alters the mass conservation requirement for each passage when compared to a system with just one entrance.

Microfacies of mappable Archean biomats, Moodies Group, Barberton Greenstone Belt, South Africa

NASA Astrophysics Data System (ADS)

Gamper, Antonia; Heubeck, Christoph; Ohnemueller, Frank; Walsh, Maud

2010-05-01

The ca. 3.22 Ga-old Moodies Group, Barberton Mountain Land, South Africa, arguably includes the world's oldest regionally mappable biofacies. There, abundant smooth, wavy, domal or cuspate, interwoven or parallel-stratified laminae of isotopically light kerogen (Noffke et al. 2006) in shallow-water or coastal environments show a microtopography of several cm, deform cohesively, trap and bind grains, and were surficially rapidly silicified. In order to investigate the microfacies and habitat of these extensive biomats, we measured stratigraphic sections, sampled for petrography and composition, and documented sedimentary structures throughout. Seven stratigraphic sections allow the reconstruction of a coastal depositional system with an thickness of approx. 240 m along an > 11 km long outcrop belt. The system can be subdivided in (from base to top deepening) terrestrial coastal, low-angle shoreline, subtidal and shoreface facies. Biomats are most densely (mm- to cm-) spaced in the shoreface unit whereas they are least common in the basal terrestrial unit in which single-pebble trains and thin gravel conglomerates occur. Biomats (mean 4 mm thick) reach their greatest individual thickness (up to 0,8 cm) and dominate the spectrum of sedimentary structures in the subtidal unit where they form black, internally laminated chert bands. Most chert bands overlie lenses of elongate, well-sorted, coarse-grained sandstone but are in turn sharply overlain by medium- and fine-grained sandstone, suggesting cyclic current activity. Clustered or regularly spaced (sub-)vertical fluid escape structures penetrate and ductily deform densely spaced interwoven biomats. They occur most widely in the shoreface facies, show a mean height of 49 cm, are commonly offset horizontally, and reach up to 230 cm. The margins of several shallow (max. 1 m deep) and up to 8 m wide channels erosively truncate wrinkled biomats of the terrestrial coastal facies. Channel fill includes dominant medium- to coarse-grained sand and subordinate palm-sized planar (apparently brittle) biomat fragments mixed with granule and pebble lag at the channel base. Channel dimensions and erosivity may suggest a subaerial setting and imply that biomat growth either predated a temporary base-level drop or grew on land, presumably in a flat coastal setting. The micromorphology, large lateral extent, and depositional architecture of the biomats indicate a well-developed, adaptable, resistant microbial ecosystem along a medium-energy coast and offer a remarkable window in the conditions under which early life on Earth developed.

Depositional facies, environments and sequence stratigraphic interpretation of the Middle Triassic-Lower Cretaceous (pre-Late Albian) succession in Arif El-Naga anticline, northeast Sinai, Egypt

NASA Astrophysics Data System (ADS)

El-Azabi, M. H.; El-Araby, A.

2005-01-01

The Middle Triassic-Lower Cretaceous (pre-Late Albian) succession of Arif El-Naga anticline comprises various distinctive facies and environments that are connected with eustatic relative sea-level changes, local/regional tectonism, variable sediment influx and base-level changes. It displays six unconformity-bounded depositional sequences. The Triassic deposits are divided into a lower clastic facies (early Middle Triassic sequence) and an upper carbonate unit (late Middle- and latest Middle/early Late Triassic sequences). The early Middle Triassic sequence consists of sandstone with shale/mudstone interbeds that formed under variable regimes, ranging from braided fluvial, lower shoreface to beach foreshore. The marine part of this sequence marks retrogradational and progradational parasequences of transgressive- and highstand systems tract deposits respectively. Deposition has taken place under warm semi-arid climate and a steady supply of clastics. The late Middle- and latest Middle/early Late Triassic sequences are carbonate facies developed on an extensive shallow marine shelf under dry-warm climate. The late Middle Triassic sequence includes retrogradational shallow subtidal oyster rudstone and progradational lower intertidal lime-mudstone parasequences that define the transgressive- and highstand systems tracts respectively. It terminates with upper intertidal oncolitic packstone with bored upper surface. The next latest Middle/early Late Triassic sequence is marked by lime-mudstone, packstone/grainstone and algal stromatolitic bindstone with minor shale/mudstone. These lower intertidal/shallow subtidal deposits of a transgressive-systems tract are followed upward by progradational highstand lower intertidal lime-mudstone deposits. The overlying Jurassic deposits encompass two different sequences. The Lower Jurassic sequence is made up of intercalating lower intertidal lime-mudstone and wave-dominated beach foreshore sandstone which formed during a short period of rising sea-level with a relative increase in clastic supply. The Middle-Upper Jurassic sequence is represented by cycles of cross-bedded sandstone topped with thin mudstone that accumulated by northerly flowing braided-streams accompanying regional uplift of the Arabo-Nubian shield. It is succeeded by another regressive fluvial sequence of Early Cretaceous age due to a major eustatic sea-level fall. The Lower Cretaceous sequence is dominated by sandy braided-river deposits with minor overbank fines and basal debris flow conglomerate.

Sequence-Stratigraphic Analysis of the Regional Observation Monitoring Program (ROMP) 29A Test Corehole and Its Relation to Carbonate Porosity and Regional Transmissivity in the Floridan Aquifer System, Highlands County, Florida

USGS Publications Warehouse

Ward, W. C.; Cunningham, K.J.; Renken, R.A.; Wacker, M.A.; Carlson, J.I.

2003-01-01

An analysis was made to describe and interpret the lithology of a part of the Upper Floridan aquifer penetrated by the Regional Observation Monitoring Program (ROMP) 29A test corehole in Highlands County, Florida. This information was integrated into a one-dimensional hydrostratigraphic model that delineates candidate flow zones and confining units in the context of sequence stratigraphy. Results from this test corehole will serve as a starting point to build a robust three-dimensional sequence-stratigraphic framework of the Floridan aquifer system. The ROMP 29A test corehole penetrated the Avon Park Formation, Ocala Limestone, Suwannee Limestone, and Hawthorn Group of middle Eocene to Pliocene age. The part of the Avon Park Formation penetrated in the ROMP 29A test corehole contains two composite depositional sequences. A transgressive systems tract and a highstand systems tract were interpreted for the upper composite sequence; however, only a highstand systems tract was interpreted for the lower composite sequence of the deeper Avon Park stratigraphic section. The composite depositional sequences are composed of at least five high-frequency depositional sequences. These sequences contain high-frequency cycle sets that are an amalgamation of vertically stacked high-frequency cycles. Three types of high-frequency cycles have been identified in the Avon Park Formation: peritidal, shallow subtidal, and deeper subtidal high-frequency cycles. The vertical distribution of carbonate-rock diffuse flow zones within the Avon Park Formation is heterogeneous. Porous vuggy intervals are less than 10 feet, and most are much thinner. The volumetric arrangement of the diffuse flow zones shows that most occur in the highstand systems tract of the lower composite sequence of the Avon Park Formation as compared to the upper composite sequence, which contains both a backstepping transgressive systems tract and a prograding highstand systems tract. Although the porous and permeable layers are not thick, some intervals may exhibit lateral continuity because of their deposition on a broad low-relief ramp. A thick interval of thin vuggy zones and open faults forms thin conduit flow zones mixed with relatively thicker carbonate-rock diffuse flow zones between a depth of 1,070 and 1,244 feet below land surface (bottom of the test corehole). This interval is the most transmissive part of the Avon Park Formation penetrated in the ROMP 29A test corehole and is included in the highstand systems tract of the lower composite sequence. The Ocala Limestone is considered to be a semiconfining unit and contains three depositional sequences penetrated by the ROMP 29A test corehole. Deposited within deeper subtidal depositional cycles, no zones of enhanced porosity and permeability are expected in the Ocala Limestone. A thin erosional remnant of the shallow marine Suwannee Limestone overlies the Ocala Limestone, and permeability seems to be comparatively low because moldic porosity is poorly connected. Rocks that comprise the lower Hawthorn Group, Suwannee Limestone, and Ocala Limestone form a permeable upper zone of the Upper Floridan aquifer, and rocks of the lower Ocala Limestone and Avon Park Formation form a permeable lower zone of the Upper Floridan aquifer. On the basis of a preliminary analysis of transmissivity estimates for wells located north of Lake Okeechobee, spatial relations among groups of relatively high and low transmissivity values within the upper zone are evident. Upper zone transmissivity is generally less than 10,000 feet squared per day in areas located south of a line that extends through Charlotte, Sarasota, DeSoto, Highlands, Polk, Osceola, Okeechobee, and St. Lucie Counties. Transmissivity patterns within the lower zone of the Avon Park Formation cannot be regionally assessed because insufficient data over a wide areal extent have not been compiled.

Macrofauna on flood delta shoals in the Wadden Sea with an underground association between the lugworm Arenicola marina and the amphipod Urothoe poseidonis

NASA Astrophysics Data System (ADS)

Lackschewitz, D.; Reise, K.

1998-06-01

Living conditions for macrofauna on flood delta shoals are determined by surf, strong currents and sediment mobility. Thus, a unique assemblage of invertebrate species colonize these far off-shore, low intertidal flats. We here describe the macrobenthic fauna of emerging shoals in the Wadden Sea between the islands of Römö and Sylt. Besides ubiquitous macroinvertebrates of the intertidal zone and species which attain their main distribution in the subtidal zone, the flood delta shoals are characterized by organisms adapted to live in these highly unstable sediments, like the polychaetes Spio martinensis, Streptosyllis websteri, Magelona mirabilis, Psammodrilus balanoglossoides, the pericarid crustaceans Cumopsis goodsiri, Tanaissus lilljeborgi, Bathyporeia sarsi and a few others. Average abundance (1440 m-2 of ind >1 mm) and biomass (12.9 g AFDW m-2) were low compared to other intertidal habitats in the Wadden Sea. Biomass was dominated by largesized individuals of the lugworm Arenicola marina. The U-shaped burrows of these polychaetes were inhabited by high numbers of Urothoe poseidonis. Maximum densities of these amphipods occurred in the deepest parts of the burrows. Sampling at approximately montly intervals revealed no apparent seasonality of U. poseidonis abundance. Together with small Capitella capitata, these amphipods constitute a deep-dwelling component of the macrofauna associated with lugworms, which is separated from all other macrofauna living at the sediment surface. As a response to rising sea level and increasing tidal ranges, we expect the unstable sandy shoals, inhabited by numerous Spio martinensis and Urothoe poseidonis, to expand within the Wadden Sea at the cost of stable sandy flats with abundant macrofauna.

Shallow Water Habitat Mapping in Cape Cod National Seashore: A Post-Hurricane Sandy Study

NASA Astrophysics Data System (ADS)

Borrelli, M.; Smith, T.; Legare, B.; Mittermayr, A.

2017-12-01

Hurricane Sandy had a dramatic impact along coastal areas in proximity to landfall in late October 2012, and those impacts have been well-documented in terrestrial coastal settings. However, due to the lack of data on submerged marine habitats, similar subtidal impact studies have been limited. This study, one of four contemporaneous studies commissioned by the US National Park Service, developed maps of submerged shallow water marine habitats in and around Cape Cod National Seashore, Massachusetts. All four studies used similar methods of data collection, processing and analysis for the production of habitat maps. One of the motivations for the larger study conducted in the four coastal parks was to provide park managers with a baseline inventory of submerged marine habitats, against which to measure change after future storm events and other natural and anthropogenic phenomena. In this study data from a phase-measuring sidescan sonar, bottom grab samples, seismic reflection profiling, and sediment coring were all used to develop submerged marine habitat maps using the Coastal and Marine Ecological Classification Standard (CMECS). Vessel-based acoustic surveys (n = 76) were conducted in extreme shallow water across four embayments from 2014-2016. Sidescan sonar imagery covering 83.37 km2 was collected, and within that area, 49.53 km2 of co-located bathymetric data were collected with a mean depth of 4.00 m. Bottom grab samples (n = 476) to sample macroinvertebrates and sediments (along with other water column and habitat data) were collected, and these data were used along with the geophysical and coring data to develop final habitat maps using the CMECS framework.

A revision of the genus Paracanthonchus (Cyatholaimidae, Nematoda) with a tabular key to species and a description of P. mamubiae sp. n. from the deep North-Western Pacific

NASA Astrophysics Data System (ADS)

Miljutina, Maria A.; Miljutin, Dmitry M.

2015-01-01

The species-rich genus of marine free-living nematodes, Paracanthonchus Mikoletzky 1924 (Nematoda: Cyatholaimidae), is revised. The genus numbers 72 valid species; twenty are indicated as species inquirenda because of poor descriptions and/or doubtful placement in the genus. Species of the genus were described from all oceans and latitudes. Of valid species, 64 ones (90%) were described from the tidal or upper subtidal zones, four species were recorded from the medium or lower shelf, and three species are abyssal. Thirty one species (43%) are known from Europe and the Northern Africa; 19 and 9 ones were described from South and North America (respectively); 8 ones were recorded from Asia; and 6 ones from the Australian region. The type species, Paracanthonchus caecus Mikoletzky 1924 has been recorded by a number of authors from various oceans around the World, yet many of these specimens have only roughly resembled the type description. Evidently, this species represents a complex of closely related species. Possibly, the same situation is in some other Paracanthonchus species, the repeated findings of which have no strong resemblance to type specimens. A tabular key to species is provided. A new abyssal species Paracanthonchus mamubiae from the Zenkevich Rise (North-Western Pacific, off North Japan, 5350 m depth) is described. The new species is characterized by: the tail, which is long with a thin, cylindrical terminal section; the absence of lateral differentiation of the cuticle; the presence of two groups of lateral pores (level of posterior part of pharynx and in cloacal region); one large dorsal tooth and two pairs of small subventral teeth combined with pharyngostomal cuticular ridges forming two denticles which may appear as a third pair of subventral teeth; 3-5 indistinct tubular preanal supplements; and a massive, proximally paired gubernaculum possessing broad flattened plates on each distal end. Each flattened gubernacular plate bears numerous (50-60) small cusps and one large process.

Paleozoic strata of the Dyckman Mountain area, northeastern Medfra quadrangle, Alaska: A section in Geologic studies in Alaska by the U.S. Geological Survey, 1998

USGS Publications Warehouse

Dumoulin, Julie A.; Bradley, Dwight C.; Harris, Anita G.

2000-01-01

Paleozoic rocks in the Dyckman Mountain area (northeastern Medfra quadrangle; Farewell terrane) include both shallowand deep-water lithologies deposited on and adjacent to a carbonate platform. Shallow-water strata, which were recognized by earlier workers but not previously studied in detail, consist of algal-laminated micrite and skeletal-peloidal wackestone, packstone, and lesser grainstone. These rocks are, at least in part, of Early and (or) Middle Devonian age but locally could be as old as Silurian; they accumulated in shallow subtidal to intertidal settings with periodically restricted water circulation. Deepwater facies, reported here for the first time, are thin, locally graded beds of micrite and calcisiltite and subordinate thick to massive beds of lime grainstone and conglomerate. Conodonts indicate an age of Silurian to Middle Devonian; the most tightly dated intervals are early Late Silurian (early to middle Ludlow). These strata formed as hemipelagic deposits, turbidites, and debris flows derived from shallow-water lithologies of the Nixon Fork subterrane. Rocks in the Dyckman Mountain area are part of a broader facies belt that is transitional between the Nixon Fork carbonate platform to the west and deeper water, basinal lithologies (Minchumina “terrane”) to the east. Transitional facies patterns are complex because of Paleozoic shifts in the position of the platform margin, Mesozoic shortening, and Late Cretaceous-Tertiary disruption by strike-slip faulting.

Numerical study on inter-tidal transports in coastal seas

NASA Astrophysics Data System (ADS)

Mao, Xinyan; Jiang, Wensheng; Zhang, Ping; Feng, Shizuo

2016-06-01

Inter-tidal (subtidal) transport processes in coastal sea depend on the residual motion, turbulent dispersion and relevant sources/sinks. In Feng et al. (2008), an updated Lagrangian inter-tidal transport equation, as well as new concept of Lagrangian inter-tidal concentration (LIC), has been proposed for a general nonlinear shallow water system. In the present study, the LIC is numerically applied for the first time to passive tracers in idealized settings and salinity in the Bohai Sea, China. Circulation and tracer motion in the three idealized model seas with different topography or coastline, termed as `flat-bottom', `stairs' and `cape' case, respectively, are simulated. The dependence of the LIC on initial tidal phase suggests that the nonlinearities in the stairs and cape cases are stronger than that in the flat-bottom case. Therefore, the `flat-bottom' case still meets the convectively weakly nonlinear condition. For the Bohai Sea, the simulation results show that most parts of it still meet the weakly nonlinear condition. However, the dependence of the LIS (Lagrangian inter-tidal salinity) on initial tidal phase is significant around the southern headland of the Liaodong Peninsula and near the mouth of the Yellow River. The nonlinearity in the former region is mainly related to the complicated coastlines, and that in the latter region is due to the presence of the estuarine salinity front.

Foundations of Wind Turbines as Stepping Stones for Non-Indigenous Species in the Southern North Sea

NASA Astrophysics Data System (ADS)

De Mesel, I.; Degraer, S.; Kerckhof, F.; Schön, I.; Martens, K.

2016-02-01

Since 2008, offshore wind farms have been constructed in the shallow waters (<50m) of the Southern North Sea. At present, hundreds of turbines are operational and many more are planned. A new habitat for benthos has been created, with vertical hard structures in the offshore environment, extending from the sandy seabed to the sea surface. Monitoring in Belgian waters focussed on the succession of the fouling community in the sub- and intertidal zone, with special attention to non-indigenous species (NIS). A Metridium senile-Jassa herdmani dominated community developed in the subtidal, and only few NIS were present (3 out of a total of 90 species observed). Their presence was however most striking in the intertidal zone, where we identified 17 obligate intertidal species with about half of them being non-indigenous. This study confirmed the hypothesis that the introduced hard substrata within offshore wind farms play an important role in the establishment and the expansion of the population of both indigenous and non-indigenous species. Foundations of wind turbines strengthen the strategic position of NIS in the southern North Sea. An ongoing study on the population genetics of a fouling species (Patella vulgata) will, in combination with dispersal modelling, elucidate the dispersal pattern and connectivity with neighbouring areas, and the role of the foundations as stepping stones.

Living on a trophic subsidy: Algal quality drives an upper-shore herbivore's consumption, preference and absorption but not growth rates.

PubMed

Quintanilla-Ahumada, Diego; Quijón, Pedro A; Navarro, Jorge M; Pulgar, José; Duarte, Cristian

2018-01-01

The transfer of seaweeds from subtidal bottoms to nearby intertidal rocky shores is a common but often overlooked phenomenon. Freshly detached seaweeds often represent critical trophic subsidies for herbivores living in upper-shore rocky intertidal areas, such as the marine snail Diloma nigerrima. This species relies on three species of seaweeds for food and displays feeding strategies to deal with a resource that is scarce and at times unpredictable. This study focused on the nutritional quality of freshly detached algae (Durvillaea antarctica, Lessonia spicata and Lessonia trabeculata) and measured Diloma nigerrima's algal consumption rates in trials with and without choice. Absorption efficiency and growth of individual snails fed on each alga were also measured. Durvillaea antarctica had the highest nutritional quality and was the most consumed algae in both single and multiple-choice trials. Absorption efficiency was also highest for D. antarctica but growth rates of snails fed with this species were similar to those fed with the other algae. Combined, these results suggest that D. nigerrima has the ability to discriminate among seaweeds based on their nutritional quality. A potential increase in oxygen uptake when D. nigerrima is consuming the preferred food item is also proposed as a plausible hypothesis to explain the mismatch between snails' preference and growth rate. These results aim to guide further studies on trophic subsidies and their role in coastal systems.

Hydrodynamic Impacts on Coastal Erosion and Deposition Processes in Cu Lao Dung (Soc Trang) and Rach Goc (Ca Mau)

NASA Astrophysics Data System (ADS)

Vo-Luong, H. P.; Phong, N. H.; Tran, D. X.; Ogston, A. S.

2016-02-01

Coastal mangrove forests are special and unique vegetation found in the tropics. They are classified as the most vulnerable ecosystem in coastal ecosystems. Moreover, mangrove forests are dynamic systems that directly influence coastal erosion and deposition processes. Cu Lao Dung (Soc Trang province) and Rach Goc (Ca Mau province) are chosen as studied sites. Although they both belong to the Mekong Delta on the eastern coast of Viet Nam, coastal erosion and deposition processes are different: Cu Lao Dung tends to be aggradational while the Rach Goc area is seriously erosional. This study aims to focus on the impact of hydrodynamics in the coastal processes at the Cu Lao Dung and Rach Goc sites. As part of field measurements in NE and SW monsoons (2014-2015), wave, current, river discharge, suspended sediment concentration, and bathymetry were measured. These data were collected in shallow sub-tidal water, on the muddy flat and within the mangrove forest. The observed data show that waves and current are dissipated quickly from shallow coastal water into the mangroves. They also depend on topography changes, characteristic in mangroves. Suspended sediment concentration increases from shallow water into the mangroves, and fluctuates according to tides, waves and currents. The analyzed data in Cu Lao Dung and Rach Goc are compared and from that, the main factors causing the erosion and deposition in these studied sites are explained.

Effects of ocean acidification and diet on thickness and carbonate elemental composition of the test of juvenile sea urchins.

PubMed

Asnaghi, Valentina; Mangialajo, Luisa; Gattuso, Jean-Pierre; Francour, Patrice; Privitera, Davide; Chiantore, Mariachiara

2014-02-01

Continuous anthropogenic CO2 emissions to the atmosphere and uptake by the oceans will cause a reduction of seawater pH and saturation state (Ω) of CaCO3 minerals from which marine calcifiers build their shells and skeletons. Sea urchins use the most soluble form of calcium carbonate, high-magnesium calcite, to build their skeleton, spines and grazing apparatus. In order to highlight the effects of increased pCO2 on the test thickness and carbonate elemental composition of juvenile sea urchins and potential differences in their responses linked to the diet, we performed a laboratory experiment on juvenile Paracentrotus lividus, grazing on calcifying (Corallina elongata) and non-calcifying (Cystoseira amentacea, Dictyota dichotoma) macroalgae, under different pH (corresponding to pCO2 values of 390, 550, 750 and 1000 μatm). Results highlighted the importance of the diet in determining sea urchin size irrespectively of the pCO2 level, and the relevance of macroalgal diet in modulating urchin Mg/Ca ratio. The present study provides relevant clues both in terms of the mechanism of mineral incorporation and in terms of bottom-up processes (algal diet) affecting top-down ones (fish predation) in rocky subtidal communities. Copyright © 2013 Elsevier Ltd. All rights reserved.

Microhabitat associations of a semi-terrestrial fish, Kryptolebias marmoratus (Poey 1880) in a mosquito-ditched mangrove forest, west-central Florida

USGS Publications Warehouse

Richards, Travis M.; Krebs, Justin M.; McIvor, Carole C.

2011-01-01

Mangrove rivulus (Kryptolebias marmoratus) is one of the few species of fish that is semi-terrestrial and able to use exposed intertidal and potentially supratidal habitats for prolonged periods of time. Based on previous work demonstrating frequent use of subterranean crab burrows as well as damp leaf litter and logs, we examined the microhabitat associations of rivulus in a mosquito-ditched mangrove forest on the Gulf coast of Florida near the northern limit of its distribution. We captured 161 rivulus on 20 dates between late April and mid-December 2007 using trench traps. Fish ranged in size from 7 to 35 mm SL. Peak abundance in mid-summer coincided with recruitment of a new year-class. The three study sites occurred within 0.5 km of one another, and experienced similar water temperatures and salinities. Nevertheless, they differed in their degree of tidal inundation, standing stock of leaf litter, and density of entrances to fiddler crab burrows. We consistently observed the highest mean catches of rivulus away from permanent subtidal waters of mosquito ditches, at intermediate relative elevations, and where leaf litter was locally abundant. Density of entrances to crab burrows was apparently unrelated to rivulus distribution or abundance in these forests.

Accommodation space, relative sea level, and the archiving of paleo-earthquakes along subduction zones

USGS Publications Warehouse

Kelsey, Harvey M.; Engelhart, Simon E.; Pilarczyk, Jessica E.; Horton, Benjamin P.; Rubin, Charles; Daryono, Mudrik; Ismail, Nazli; Hawkes, Andrea D.; Bernhardt, Christopher E.; Cahill, Niamh

2015-01-01

The spatial variability of Holocene relative sea-level (RSL) change influences the capacities of coastal environments to accommodate a sedimentary record of paleoenvironmental change. In this study we couch a specific investigation in more general terms in order to demonstrate the applicability of the relative sea-level history approach to paleoseismic investigations. Using subsidence stratigraphy, we trace the different modes of coastal sedimentation over the course of time in the eastern Indian Ocean where RSL change evolved from rapidly rising to static from 8000 yr ago to present. Initially, the coastal sites from the Aceh, Sumatra, coastal plain, which are subject to repeated great earthquakes and tsunamis, built up a sedimentary sequence in response to a RSL rise of 1.4 mm/yr. The sequence found at 2 sites 8 km apart contained 3 soils of a mangrove origin (Rhizophora,Bruguiera/Ceriops, Avicennia pollen, and/or intertidal foraminifera) buried by sudden submergence related to coseismic subsidence and 6 tsunami sands that contain pristine subtidal and planktic foraminifera. After 3800 cal yr B.P. (years before A.D. 1950), sea level stabilized and remained such to the present. The stable relative sea level reduced accommodation space in the late Holocene, suggesting that the continued aggradation of the coastal plain was a consequence of periodic coastal inundation by tsunamis.

Occurrence of the newly described kinorhynch genus Meristoderes (Cyclorhagida: Echinoderidae) in Korea, with the description of four new species

NASA Astrophysics Data System (ADS)

Sørensen, Martin V.; Rho, Hyun Soo; Min, Won-Gi; Kim, Dongsung; Chang, Cheon Young

2013-06-01

Meristoderes is the most recently described kinorhynch genus and has until now only accommodated its type species M. macracanthus from the Mediterranean and M. galatheae from the Solomon Islands in Southeast Asia. The present contribution is an account on the genus based on samples from the ongoing exploration of the kinorhynch fauna in coastal and subtidal waters around in the Korean Peninsula. The samples yielded no less than five new species of Meristoderes, of which four are formally described herein, whereas only diagnostic notes are provided for the fifth. The descriptions are supplemented with a key to species of the genus, and morphological notes on the organization of cephalic structures and cuticular trunk structures. New morphological findings include intrageneric variation in the composition of the terminal segment, which may have either one unpaired or two paired tergal plates. The data also show that the differentiation of a tergal and sternal plate in segment 2 varies greatly between the species. Results of the present study indicate that the genus probably holds a significant, unrecovered biodiversity, but the data also shed light on potential future taxonomic problems among genera of Echinoderidae and stress the importance of identifying additional diagnostic traits to define Meristoderes.

Infection patterns in white sea blue mussels Mytilus edulis of different age and size with metacercariae of Himasthla elongata (Echinostomatidae) and Cercaria parvicaudata (Renicolidae).

PubMed

Nikolaev, K E; Sukhotin, A A; Galaktionov, K V

2006-07-11

Infection of mussels Mytilus edulis L. by 2 trematode species was studied in a natural intertidal population in the Chupa inlet of the White Sea. The prevalence of metacercariae of Himasthla elongata (Mehlis, 1831) and Cercaria parvicaudata (Stunkard & Shaw, 1931) in mussels reached 100% in 3 to 4 yr old molluscs and remained at this level in older individuals. Infection intensity increased evenly with the age of the molluscan host, showing a tendency to decrease only in the oldest (9 yr old) mussels. These patterns of age dynamics of prevalence and infection intensity were associated with accumulation of trematode larvae in the course of the molluscs' lives. Ability of metacercariae to exist in mussels for long periods (at least 2.5 yr) was verified in the course of an experiment, during which infected molluscs were kept in a subtidal net cage. Decrease of infection intensity in the oldest individuals may reflect selective mortality of the most severely infected molluscs. Among mussels of the same age, higher infection intensity values occurred in larger individuals. This may be due to an enhanced pumping rate in large molluscs, which increases the probability of cercariae, free-living trematode larvae, infecting them via water currents.

Phylogenetic relationships and biogeography of Ptilophora (Gelidiales, Rhodophyta) with descriptions of P. aureolusa, P. malagasya, and P. spongiophila from Madagascar.

PubMed

Boo, Ga Hun; Gall, Line Le; Hwang, Il Ki; Miller, Kathy Ann; Boo, Sung Min

2018-04-01

The genus Ptilophora currently includes 16 species occurring mostly in subtidal habitats of the Indo-Pacific Ocean, but its global diversity and biogeography are poorly understood. We analyzed mitochondrial cox1, plastid rbcL and plastid psbA sequences from specimens collected in southern Madagascar during the 2010 Atimo Vatae expedition and studied their morphologies. Both morphological and molecular data sets demonstrated the presence of five species in southern Madagascar: Ptilophora hildebrandtii, P. pterocladioides, and three new species described here, P. aureolusa, P. malagasya, and P. spongiophila. Ptilophora aureolusa is distinguished by its compound pinnae with uniformly spaced pinnules. Ptilophora malagasya has an indistinct midrib and irregularly spaced pinnules. Ptilophora spongiophila, heavily coated with sponges, has cylindrical to flattened main axes, lateral and surface proliferations, and spatulate tetrasporangial sori. The species of Ptilophora found in Madagascar are endemic, except P. hildebrandtii, which also occurs in eastern Africa. Ptilophora comprises four phylogenetic groups that map to eastern Australia, Japan, western Australia/Southeast Asia/Madagascar/eastern Africa, and Madagascar/eastern Africa/Aegean Sea. Biogeographical analysis revealed that the ancestor of Ptilophora originated in Australia, but most of the species radiated from Madagascar. © 2018 Phycological Society of America.

The potential role of habitat-forming seaweeds in modeling benthic ecosystem properties

NASA Astrophysics Data System (ADS)

Bustamante, María; Tajadura, Javier; Díez, Isabel; Saiz-Salinas, José Ignacio

2017-12-01

Canopy-forming seaweeds provide specific habitats with key ecological properties and are facing severe declines worldwide with unforeseeable consequences for ecosystem processes. Investigating the loss of such natural habitats in order to develop management strategies for conservation is a major challenge in marine ecological research. This study investigated the shallow rocky bottoms of the southern Bay of Biscay at two sampling times with a view to identifying the effect of canopy seaweed availability on the taxonomic and functional properties of invertebrate multivariate structure, abundance, density, diversity and evenness. The multivariate taxonomic and functional structure of assemblages changed significantly according to canopy availability in terms of taxa and functional groups abundance, but no substantial change was observed in composition. Biogenic habitat simplification resulted in a decrease in total invertebrate abundance and in taxonomic and functional density and diversity, whilst no effects were observed in taxonomic and functional evenness. Loss of canopy involved an impoverishment of the whole community particularly for epiphytic colonial sessile suspension-feeders, but it also extended to non-epiphytic forms. Our results emphasize the importance of canopy decline as a major driver of changes in benthic ecosystem properties and highlight that biogenic space provided by canopy is a limiting resource for the development of rocky subtidal invertebrates.

A numerical study of the South China Sea Warm Current during winter monsoon relaxation

NASA Astrophysics Data System (ADS)

Zhang, Cong; Ding, Yang; Bao, Xianwen; Bi, Congcong; Li, Ruixiang; Zhang, Cunjie; Shen, Biao; Wan, Kai

2018-03-01

Using a Finite-Volume Community Ocean Model, we investigated the dynamic mechanism of the South China Sea Warm Current (SCSWC) in the northern South China Sea (NSCS) during winter monsoon relaxation. The model reproduces the mean surface circulation of the NSCS during winter, while model-simulated subtidal currents generally capture its current pattern. The model shows that the current over the continental shelf is generally southwestward, under a strong winter monsoon condition, but a northeastward counter-wind current usually develops between 50-and 100-m isobaths, when the monsoon relaxes. Model experiments, focusing on the wind relaxation process, show that sea level is elevated in the northwestern South China Sea (SCS), related to the persistent northeasterly monsoon. Following wind relaxation, a high sea level band builds up along the mid-shelf, and a northeastward current develops, having an obvious vertical barotropic structure. Momentum balance analysis indicates that an along-shelf pressure gradient provides the initial driving force for the SCSWC during the first few days following wind relaxation. The SCSWC subsequently reaches a steady quasi-geostrophic balance in the cross-shelf direction, mainly linked to sea level adjustment over the shelf. Lagrangian particle tracking experiments show that both the southwestward coastal current and slope current contribute to the northeastward movement of the SCSWC during winter monsoon relaxation.

Mechanisms and evolution of hypoxia tolerance in fish

PubMed Central

Mandic, Milica; Todgham, Anne E.; Richards, Jeffrey G.

2008-01-01

The ability of an organism to acquire O2 from its environment is key to survival and can play an important role in dictating a species' ecological distribution. This study is the first, to our knowledge, to show a tight, phylogenetically independent correlation between hypoxia tolerance, traits involved in dictating O2 extraction capacity and the distribution of a group of closely related fish species, sculpins from the family Cottidae, along the nearshore marine environment. Sculpins with higher hypoxia tolerance, measured as low critical O2 tensions (Pcrit), inhabit the O2 variable intertidal zones, while species with lower hypoxia tolerance inhabit the more O2 stable subtidal zone or freshwater. Hypoxia tolerance is phylogenetically independently associated with an enhanced O2 extraction capacity, with three principal components accounting for 75 per cent of the variation in Pcrit: routine O2 consumption rate; mass-specific gill surface area; and whole blood haemoglobin (Hb)–O2-binding affinity (P50). Variation in whole blood Hb–O2 P50 is strongly correlated with the intrinsic O2-binding properties of the purified Hb while the differences in the concentration of the allosteric Hb modulators, ATP and GTP, provide a Hb system with substantial plasticity for survival in a highly O2 variable environment. PMID:18996831

Bio-foam enhances larval retention in a free-spawning marine tunicate

PubMed Central

Castilla, Juan Carlos; Manríquez, Patricio H.; Delgado, Alejandro P.; Gargallo, Ligia; Leiva, Angel; Radic, Deodato

2007-01-01

Here we report a mechanism that reduces dispersal of early developing stages and larvae in a free-spawning intertidal and shallow subtidal tunicate, Pyura praeputialis (Heller 1878), in the Bay of Antofagasta, Chile. The spawning of gametes by the tunicate into the naturally turbulent aerated seawater decreases their surface tension and induces the formation of a bio-foam. Water collected from foamy intertidal pools and tide channels showed a high concentration of P. praeputialis early developing stages and tadpole larvae in the foam. Because gametes are synchronically spawned for external fertilization and larvae settle near adults, our results suggest that this bio-foam increases fertilization success and effective settlement of their short-lived larvae in the vicinity of the adults spawning the gametes. This mechanism reinforces published evidence suggesting that local retention of intertidal and inshore marine invertebrate larvae may be more common than previously thought, offering, for instance, new perspectives for the design and networking of marine protected and management areas. PMID:17984045

Bio-foam enhances larval retention in a free-spawning marine tunicate.

PubMed

Castilla, Juan Carlos; Manríquez, Patricio H; Delgado, Alejandro P; Gargallo, Ligia; Leiva, Angel; Radic, Deodato

2007-11-13

Here we report a mechanism that reduces dispersal of early developing stages and larvae in a free-spawning intertidal and shallow subtidal tunicate, Pyura praeputialis (Heller 1878), in the Bay of Antofagasta, Chile. The spawning of gametes by the tunicate into the naturally turbulent aerated seawater decreases their surface tension and induces the formation of a bio-foam. Water collected from foamy intertidal pools and tide channels showed a high concentration of P. praeputialis early developing stages and tadpole larvae in the foam. Because gametes are synchronically spawned for external fertilization and larvae settle near adults, our results suggest that this bio-foam increases fertilization success and effective settlement of their short-lived larvae in the vicinity of the adults spawning the gametes. This mechanism reinforces published evidence suggesting that local retention of intertidal and inshore marine invertebrate larvae may be more common than previously thought, offering, for instance, new perspectives for the design and networking of marine protected and management areas.

Continuous resistivity profiling data from Northport Harbor and Manhasset Bay, Long Island, New York

USGS Publications Warehouse

Cross, V.A.; Bratton, J.F.; Crusius, John; Kroeger, K.D.; Worley, C.R.

2012-01-01

An investigation of coastal groundwater systems was performed along the North Shore of Long Island, New York, during May 2008 to constrain nutrient delivery to Northport Harbor and Manhasset Bay by delineating locations of likely groundwater discharge. The embayments are bounded by steep moraines and are underlain by thick, fine-grained sediments deposited in proglacial lakes during the last ice age. Beach sand and gravel overlie the glacial deposits along the coast. The continuous resistivity profiling (CRP) surveys that were conducted indicate the existence of low-salinity groundwater in shore-parallel bands, typically 25 to 50 meters wide, along the shorelines of both bays. Piezometer sampling and seepage meter deployments in intertidal and subtidal areas of the two bays confirmed the presence and discharge of brackish and low-salinity groundwater. The large tidal ranges (up to 3 meters) and the steep onshore topography and hydraulic gradients are important variables controlling coastal groundwater discharge in these areas.

Molar tooth carbonates and benthic methane fluxes in Proterozoic oceans.

PubMed

Shen, Bing; Dong, Lin; Xiao, Shuhai; Lang, Xianguo; Huang, Kangjun; Peng, Yongbo; Zhou, Chuanming; Ke, Shan; Liu, Pengju

2016-01-07

Molar tooth structures are ptygmatically folded and microspar-filled structures common in early- and mid-Proterozoic (∼2,500-750 million years ago, Ma) subtidal successions, but extremely rare in rocks <750 Ma. Here, on the basis of Mg and S isotopes, we show that molar tooth structures may have formed within sediments where microbial sulphate reduction and methanogenesis converged. The convergence was driven by the abundant production of methyl sulphides (dimethyl sulphide and methanethiol) in euxinic or H2S-rich seawaters that were widespread in Proterozoic continental margins. In this convergence zone, methyl sulphides served as a non-competitive substrate supporting methane generation and methanethiol inhibited anaerobic oxidation of methane, resulting in the buildup of CH4, formation of degassing cracks in sediments and an increase in the benthic methane flux from sediments. Precipitation of crack-filling microspar was driven by methanogenesis-related alkalinity accumulation. Deep ocean ventilation and oxygenation around 750 Ma brought molar tooth structures to an end.

Seagrass impact on sediment exchange between tidal flats and salt Marsh, and the sediment budget of shallow bays

USGS Publications Warehouse

Donatelli, Carmine; Ganju, Neil Kamal; Fagherazzi, Sergio; Leonardi, Nicoletta

2018-01-01

surroundings and are therefore frequently referred to as ecological engineers. The effect of seagrasses on coastal bay resilience and sediment transport dynamics is understudied. Here we use six historical maps of seagrass distribution in Barnegat Bay, USA, to investigate the role of these vegetated surfaces on the sediment storage capacity of shallow bays. Analyses are carried out by means of the Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) numerical modeling framework. Results show that a decline in the extent of seagrass meadows reduces the sediment mass potentially stored within bay systems. The presence of seagrass reduces shear stress values across the entire bay, including unvegetated areas, and promotes sediment deposition on tidal flats. On the other hand, the presence of seagrasses decreases suspended sediment concentrations, which in turn reduces the delivery of sediment to marsh platforms. Results highlight the relevance of seagrasses for the long-term survival of coastal ecosystems, and the complex dynamics regulating the interaction between subtidal and intertidal landscapes.

San Francisco Bay living shorelines: Restoring Eelgrass and Olympia Oysters for habitat and shore protection: Chapter 17

USGS Publications Warehouse

Boyer, Katharyn E.; Zabin, Chela; De La Cruz, Susan; Grosholz, Edwin D.; Orr, Michelle; Lowe, Jeremy; Latta, Marilyn; Miller, Jen; Kiriakopolos, Stephanie; Pinnell, Cassie; Kunz, Damien; Modéran, Julien; Stockmann, Kevin; Ayala, Geana; Abbott, Robert; Obernolte, Rena

2017-01-01

Living shorelines projects utilize a suite of sediment stabilization and habitat restoration techniques to maintain or build the shoreline, while creating habitat for a variety of species, including invertebrates, fish, and birds (see National Oceanic and Atmospheric Administration [NOAA] 2015 for an overview). The term “living shorelines” denotes provision of living space and support for estuarine and coastal organisms through the strategic placement of native vegetation and natural materials. This green coastal infrastructure can serve as an alternative to bulkheads and other engineering solutions that provide little to no habitat in comparison (Arkema et al. 2013; Gittman et al. 2014; Scyphers et al. 2011). In the United States, the living shorelines approach has been implemented primarily on the East and Gulf Coasts, where it has been shown to enhance habitat values and increase connectivity between wetlands, mudflats, and subtidal lands, while reducing shoreline erosion during storms and even hurricanes (Currin et al. 2015; Gittman et al. 2014, 2015).

Magnitude and timing of episodic sea-level rise during the last deglaciation

USGS Publications Warehouse

Locker, S.D.; Hine, A.C.; Tedesco, L.P.; Shinn, E.A.

1996-01-01

A succession of elevated ridge deposits on the south Florida margin was mapped using high-resolution seismic and side-scan sonar imaging in water depths ranging from 50 to 124 m. The ridges are interpreted to be subtidal shoal complexes and paleoshorelines (eolian dune or beach) formed during the last sea-level transgression. Oolitic and skeletal grainstones and mixed skeletal-peloidal-ooid packstones were recovered using a research submersible. All of the grains are of shallow-water or intertidal origin, and both marine and nonmarine cements were identified. Formation and preservation of these features are attributed to episodic and rapid changes in the rate of the deglacial sea-level rise at the onset of the termination 1A ??18O excursion. This high-resolution record of sea-level change appears to be related to deglacial processes operating on submillennial time scales and supports increasing evidence of rapid episodic fluctuations in ice volume, climate, and ocean-circulation patterns during glacialinterglacial transitions.

Three New Records of Gastropoda (Mollusca) from the Nansha Islands, China

NASA Astrophysics Data System (ADS)

Chen, Zhiyun; Shi, Wei; Gong, Li

2018-04-01

The Nansha Islands, China, have extremely high marine biodiversity and hundreds of mollusks have been reported there. Benthos resources investigations of the intertidal and subtidal zone around the Nansha Islands have been continuously performed for decades, and recently, dozens of new species and new records of mollusks have been reported from this area. This paper dealt with three new record species of the Gastropoda from Chinese waters: Cerithium salebrosum Sowerby II, 1855, Vexillum militare (Reeve, 1845) and Vexillum bizonale (Dautzenberg et Bouge, 1923), respectively belonging to three families: Cerithiidae Fleming, 1822, and Costellariidae MacDonald, 1860. All specimens were collected from the Nansha Islands during the benthos resources investigations on the intertidal zone of islands and reefs in the South China Sea in recent years. Diagnosis and geographic descriptions of both genus and species, illustrations of each species were given in this contribution, and discussion of taxonomy, identification features and faunal characteristics were presented. All examined specimens were deposited in the Marine Biodiversity Collections of South China Sea, Chinese Academy of Sciences.

Exceptionally well-preserved Permocalculus cf. tenellus (Pia) (Gymnocodiaceae) from Upper Permian Khuff Formation limestones, Saudi Arabia

NASA Astrophysics Data System (ADS)

Hughes, G. W.

2017-04-01

An exceptionally well-preserved specimen of the articulated rhodophyte Permocalculus, compared with P. tenellus sensu Elliott, 1955, is described from fine-grained Upper Permian limestones of the Khuff Formation of Saudi Arabia. Longitudinal medullary and sheaf-like cortical filaments extend through the uniserial series of elongate-globular, concave- and convex-terminating, interlocking segments for which they are interpreted to have functioned in articulation. The filaments tend to splay and branch laterally into the cortex where they terminate at the pores. At the terminal aperture, the filaments extend as bifurcating and possibly trifurcating branches and may serve as the origin of a new segment. Numerous elongate-globular chambers, up to five in each row and intimately involved with the filaments, are developed in the outer medulla and are considered to represent reproductive sporangia. The specimen is considered to have occupied predominantly low-energy, normal to slightly elevated salinity, shallow conditions within the subtidal regime of a lagoon.

Subcellular evidences of redox imbalance in well-established populations of an endangered limpet. Reasons for alarm?

PubMed

Espinosa, Free; Rivera-Ingraham, Georgina A

2016-08-15

Intertidal species are more vulnerable to anthropogenic disturbances than others inhabiting subtidal and offshore habitats. Coastal development frequently results in trace-metal pollution. For endangered species such as Patella ferruginea it can be a high risk that leads local populations to extinction. Three localities were surveyed, one within a natural and unpolluted area and the other two within the harbor of Ceuta (Strait of Gibraltar), on breakwaters outside and inside. The specimens collected inside the harbor reached 3-fold higher Hg content than for those incoming from the natural area. PERMANOVA test indicated that metal composition of the specimens from inside the harbor was different from the rest. In addition, evidence of cell damage was detected in the specimens from the harbor area. This highlights the urgency of undertaking a physiological evaluation of some of the most vulnerable populations, establishing eco-physiological protocols for monitoring and managing populations settled on artificial substrata. Copyright © 2016 Elsevier Ltd. All rights reserved.

Luminescence dating of the barrier spit at Chilika Lake, Orissa, India.

PubMed

Murray, A S; Mohanti, M

2006-01-01

Optically stimulated luminescence dating has been used to investigate the chronological development of the outer barrier spit forming Chilika Lake (Orissa, India), the largest brackish-water lagoon in Asia. Sixteen samples were examined, and these yielded equivalent doses of between 153 +/- 3 mGy and 2.23 +/- 0.07 Gy, corresponding to ages from approximately 40 y at the top of the spit to approximately 300 y at the bottom. The youngest ages are consistent with the age of the overlying vegetation, and modern material taken from the sub-tidal beach gave a dose of 4 +/- 2 mGy (corresponding to an age of 0.7 +/- 0.4 y), confirming that any previous potential luminescence signal in the source sediment is completely set to zero before incorporation into the spit. A clearly defined period of >2.5 m of barrier construction approximately 40 y ago is identified; prior to that the deposition rate was relatively constant for approximately 300 y.

Infectious diseases affect marine fisheries and aquaculture economics

USGS Publications Warehouse

Lafferty, Kevin D.; Harvell, C. Drew; Conrad, Jonathan M.; Friedman, Carolyn S.; Kent, Michael L.; Kuris, Armand M.; Powell, Eric N.; Rondeau, Daniel; Saksida, Sonja M.

2015-01-01

Seafood is a growing part of the economy, but its economic value is diminished by marine diseases. Infectious diseases are common in the ocean, and here we tabulate 67 examples that can reduce commercial species' growth and survivorship or decrease seafood quality. These impacts seem most problematic in the stressful and crowded conditions of aquaculture, which increasingly dominates seafood production as wild fishery production plateaus. For instance, marine diseases of farmed oysters, shrimp, abalone, and various fishes, particularly Atlantic salmon, cost billions of dollars each year. In comparison, it is often difficult to accurately estimate disease impacts on wild populations, especially those of pelagic and subtidal species. Farmed species often receive infectious diseases from wild species and can, in turn, export infectious agents to wild species. However, the impact of disease export on wild fisheries is controversial because there are few quantitative data demonstrating that wild species near farms suffer more from infectious diseases than those in other areas. The movement of exotic infectious agents to new areas continues to be the greatest concern.

Molar tooth carbonates and benthic methane fluxes in Proterozoic oceans

PubMed Central

Shen, Bing; Dong, Lin; Xiao, Shuhai; Lang, Xianguo; Huang, Kangjun; Peng, Yongbo; Zhou, Chuanming; Ke, Shan; Liu, Pengju

2016-01-01

Molar tooth structures are ptygmatically folded and microspar-filled structures common in early- and mid-Proterozoic (∼2,500–750 million years ago, Ma) subtidal successions, but extremely rare in rocks <750 Ma. Here, on the basis of Mg and S isotopes, we show that molar tooth structures may have formed within sediments where microbial sulphate reduction and methanogenesis converged. The convergence was driven by the abundant production of methyl sulphides (dimethyl sulphide and methanethiol) in euxinic or H2S-rich seawaters that were widespread in Proterozoic continental margins. In this convergence zone, methyl sulphides served as a non-competitive substrate supporting methane generation and methanethiol inhibited anaerobic oxidation of methane, resulting in the buildup of CH4, formation of degassing cracks in sediments and an increase in the benthic methane flux from sediments. Precipitation of crack-filling microspar was driven by methanogenesis-related alkalinity accumulation. Deep ocean ventilation and oxygenation around 750 Ma brought molar tooth structures to an end. PMID:26739600

Infectious Diseases Affect Marine Fisheries and Aquaculture Economics

NASA Astrophysics Data System (ADS)

Lafferty, Kevin D.; Harvell, C. Drew; Conrad, Jon M.; Friedman, Carolyn S.; Kent, Michael L.; Kuris, Armand M.; Powell, Eric N.; Rondeau, Daniel; Saksida, Sonja M.

2015-01-01

Seafood is a growing part of the economy, but its economic value is diminished by marine diseases. Infectious diseases are common in the ocean, and here we tabulate 67 examples that can reduce commercial species' growth and survivorship or decrease seafood quality. These impacts seem most problematic in the stressful and crowded conditions of aquaculture, which increasingly dominates seafood production as wild fishery production plateaus. For instance, marine diseases of farmed oysters, shrimp, abalone, and various fishes, particularly Atlantic salmon, cost billions of dollars each year. In comparison, it is often difficult to accurately estimate disease impacts on wild populations, especially those of pelagic and subtidal species. Farmed species often receive infectious diseases from wild species and can, in turn, export infectious agents to wild species. However, the impact of disease export on wild fisheries is controversial because there are few quantitative data demonstrating that wild species near farms suffer more from infectious diseases than those in other areas. The movement of exotic infectious agents to new areas continues to be the greatest concern.

Hydrocarbons in the sediments of the Bermuda region lagoonal to abyssal depths

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sletter, T.D.; Butler, J.N.; Barbash, J.E.

1980-01-01

Gas chromatographic analyses of the pentane fraction derived from surface sediments collected from 20 stations (50 cores) around Bermuda from the subtidal zone to 40 m depth and one deep-water sediment sample from 1400 m depth showed that outside the protective boiler reef, the total aliphatic (pentane-extractable) hydrocarbon content was less than inside the reef (3-10 jg/g dry weight outside vs. 10-65 jg/g inside). Samples from the 1400 m depth showed < 1.0 jg/g aliphatic hydrocarbon content. The chromatograms from the shipping channels showed fresh petroleum source concentrations of 8-31 jg/g; harbors yielded chromatograms typical of chronic petroleum contamination, withmore » 30-110 jg/g concentrations. Several biogenic compounds (including C15 and C17 n-alkanes and most probably derived from marine algae) were observed, in addition to the petroleum-derived hydrocarbons. The criteria adopted for distinguishing biogenic and petroleum hydrocarbons are given.« less

Infectious diseases affect marine fisheries and aquaculture economics.

PubMed

Lafferty, Kevin D; Harvell, C Drew; Conrad, Jon M; Friedman, Carolyn S; Kent, Michael L; Kuris, Armand M; Powell, Eric N; Rondeau, Daniel; Saksida, Sonja M

2015-01-01

Seafood is a growing part of the economy, but its economic value is diminished by marine diseases. Infectious diseases are common in the ocean, and here we tabulate 67 examples that can reduce commercial species' growth and survivorship or decrease seafood quality. These impacts seem most problematic in the stressful and crowded conditions of aquaculture, which increasingly dominates seafood production as wild fishery production plateaus. For instance, marine diseases of farmed oysters, shrimp, abalone, and various fishes, particularly Atlantic salmon, cost billions of dollars each year. In comparison, it is often difficult to accurately estimate disease impacts on wild populations, especially those of pelagic and subtidal species. Farmed species often receive infectious diseases from wild species and can, in turn, export infectious agents to wild species. However, the impact of disease export on wild fisheries is controversial because there are few quantitative data demonstrating that wild species near farms suffer more from infectious diseases than those in other areas. The movement of exotic infectious agents to new areas continues to be the greatest concern.

Exploiting biological activities of brown seaweed Ecklonia cava for potential industrial applications: a review.

PubMed

Wijesinghe, W A J P; Jeon, You-Jin

2012-03-01

Seaweeds are rich in vitamins, minerals, dietary fibres, proteins, polysaccharides and various functional polyphenols. Many researchers have focused on brown algae as a potential source of bioactive materials in the past few decades. Ecklonia cava is a brown seaweed that is abundant in the subtidal regions of Jeju Island in the Republic of Korea. This seaweed attracted extensive interest due to its multiple biological activities. E. cava has been identified as a potential producer of wide spectrum of natural substances such as carotenoids, fucoidans and phlorotannins showing different biological activities in vital industrial applications including pharmaceutical, nutraceutical, cosmeceutical and functional food. This review focuses on biological activities of the brown seaweed E. cava based on latest research results, including antioxidant, anticoagulative, antimicrobial, antihuman immunodeficiency virus, anti-inflammatory, immunomodulatory, antimutagenic, antitumour and anticancer effects. The facts summarized here may provide novel insights into the functions of E. cava and its derivatives and potentially enable their use as functional ingredients in potential industrial applications.

Shell damage and shell repair in the Antarctic limpet Nacella concinna from King George Island

NASA Astrophysics Data System (ADS)

Cadée, Gerhard C.

1999-03-01

Nacella concinna is the most conspicuous macroinvertebrate in the intertidal of King George Island. An important predator, the Kelp gull Larus dominicanus, feeds on Nacella during spring low tides. The gulls deposit empty Nacella shells as regurgitates mainly on roosts on coastal rocks. The regurgitates were found to consist of 40% shell fragments by weight and 60% intact shells. Faeces of Kelp gulls contained much smaller fragments than the regurgitates. Some of the Nacella, particularly those too large to ingest, are handled in the intertidal. The middens are, therefore, inadequate to study size selection by Kelp gulls: the largest Nacella are underrepresented. Seventy-five per cent of the intact Nacella shells from the Larus middens showed one or more shell repairs. Such repairs may be due to unsuccessful attacks by gulls, but more probably they indicate damage caused by rolling ice blocks and stones in the intertidal and shallow subtidal. A number of living Nacella were found stranded on the beach, detached from the rocks. They showed damage along the shell margin and even one Nacella was collected without any shell left. The observed repair frequency of 75% in Nacella was much higher than in other (smaller) intertidal gastropods at Potter Peninsula (3-11%, av. 8%). Comparably high frequencies are observed for instance in tropical intertidal gastropods, where repair is due to heavy unsuccessful crab predation; however, shell-crushing crabs are absent on King George Island. This indicates that palaeontologists should be cautious in ascribing all shell repairs in fossil shells (particularly from tidal environments) to predators. Shell repair in the related Nacella deaurata, collected in a less exposed site at Port Stanley (Falkland Islands), occurred only in 13% of the specimens. Another conspicuous form of shell damage was due to grazing by Nacella on the boring algae living in other Nacella shells. Epigrowth of crustose calcareous algae inhibited such grazing, but in the absence of epigrowth deep hollows were scraped in the shells, the parallel scratches by the radula clearly visible, urging Nacella to repair its shell by producing more shelly material on the inside.

Latitudinal Discontinuity in Thermal Conditions along the Nearshore of Central-Northern Chile

PubMed Central

Tapia, Fabian J.; Largier, John L.; Castillo, Manuel; Wieters, Evie A.; Navarrete, Sergio A.

2014-01-01

Over the past decade, evidence of abrupt latitudinal changes in the dynamics, structure and genetic variability of intertidal and subtidal benthic communities along central-northern Chile has been found consistently at 30–32°S. Changes in the advective and thermal environment in nearshore waters have been inferred from ecological patterns, since analyses of in situ physical data have thus far been missing. Here we analyze a unique set of shoreline temperature data, gathered over 4–10 years at 15 sites between 28–35°S, and combine it with satellite-derived winds and sea surface temperatures to investigate the latitudinal transition in nearshore oceanographic conditions suggested by recent ecological studies. Our results show a marked transition in thermal conditions at 30–31°S, superimposed on a broad latitudinal trend, and small-scale structures associated with cape-and-bay topography. The seasonal cycle dominated temperature variability throughout the region, but its relative importance decreased abruptly south of 30–31°S, as variability at synoptic and intra-seasonal scales became more important. The response of shoreline temperatures to meridional wind stress also changed abruptly at the transition, leading to a sharp drop in the occurrence of low-temperature waters at northern sites, and a concurrent decrease in corticated algal biomass. Together, these results suggest a limitation of nitrate availability in nearshore waters north of the transition. The localized alongshore change results from the interaction of latitudinal trends (e.g., wind stress, surface warming, inertial period) with a major headland-bay system (Punta Lengua de Vaca at 30.25°S), which juxtaposes a southern stretch of coast characterized by upwelling with a northern stretch of coast characterized by warm surface waters and stratification. This transition likely generates a number of latitude-dependent controls on ecological processes in the nearshore that can explain species-specific effects, and add strength to the suggestion of an oceanography-driven, major spatial transition in coastal communities at 30–31°S. PMID:25334020

Coastal ocean transport patterns in the central Southern California Bight

USGS Publications Warehouse

Noble, M.A.; Rosenberger, K.J.; Hamilton, P.; Xu, J. P.

2009-01-01

In the past decade, several large programs that monitor currents and transport patterns for periods from a few months to a few years were conducted by a consortium of university, federal, state, and municipal agencies in the central Southern California Bight, a heavily urbanized section of the coastal ocean off the west coast of the United States encompassing Santa Monica Bay, San Pedro Bay, and the Palos Verdes shelf. These programs were designed in part to determine how alongshelf and cross-shelf currents move sediments, pollutants, and suspended material through the region. Analysis of the data sets showed that the current patterns in this portion of the Bight have distinct changes in frequency and amplitude with location, in part because the topography of the shelf and upper slope varies rapidly over small spatial scales. However, because the mean, subtidal, and tidal-current patterns in any particular location were reasonably stable with time, one could determine a regional pattern for these current fields in the central Southern California Bight even though measurements at the various locations were obtained at different times. In particular, because the mean near-surface flows over the San Pedro and Palos Verdes shelves are divergent, near-surface waters from the upper slope tend to carry suspended material onto the shelf in the northwestern portion of San Pedro Bay. Water and suspended material are also carried off the shelf by the mean and subtidal flow fields in places where the orientation of the shelf break changes abruptly. The barotropic tidal currents in the central Southern California Bight flow primarily alongshore, but they have pronounced amplitude variations over relatively small changes in alongshelf location that are not totally predicted by numerical tidal models. Nonlinear internal tides and internal bores at tidal frequencies are oriented more across the shelf. They do not have a uniform transport direction, since they move fine sediment from the shelf to the slope in Santa Monica Bay, but carry suspended material from the mid-shelf to the beach in San Pedro Bay. It is clear that there are a large variety of processes that transport sediments and contaminants along and across the shelf in the central Southern California Bight. However, because these processes have a variety of frequencies and relatively small spatial scales, the dominant transport processes tend to be localized and have dissimilar characteristics even in adjacent regions of this small part of the coastal ocean. ?? 2009 The Geological Society of America.

Spectral analysis of one-way and two-way downscaling applications for a tidally driven coastal ocean forecasting system

NASA Astrophysics Data System (ADS)

Solano, Miguel; Gonzalez, Juan; Canals, Miguel; Capella, Jorge; Morell, Julio; Leonardi, Stefano

2017-04-01

A prevailing problem for a tidally driven coastal ocean has been the adequate imposition of open boundary conditions. This study aims at assessing the role of open boundary conditions and tidal forcing for one and two way downscaling applications at high resolution. The operational system is based on the Caribbean Coastal Ocean Forecasting System (COFS) that uses the Regional Ocean Modeling System (ROMS), a split-explicit ocean model in which the barotropic (2D) and baroclinic (3D) modes advance separately. This COFS uses a uniform horizontal grid with 1km resolution, but a grid sensitivity analysis is performed for both one and two way downscaling methodologies with horizontal resolutions up to 700m. Initial and lateral boundary conditions are derived from the U.S Naval Oceanographic Office (NAVOCEANO) operational AmSeas model forecast, a 3-km resolution of the regional Navy Coastal Ocean Model (NCOM) that encompasses the Gulf of Mexico and Caribbean Sea. Meteorological conditions are interpolated from the Navy's COAMPS model with the exception of surface stresses, which are computed from a 2-km application of the WRF model used by NCEP's National Digital Forecast Database. Tidal forcing is performed in two different ways: 1) tidal and sub-tidal variability is imposed to the barotropic and baroclinic modes by downscaling from the AmSeas NCOM regional model and 2) tidal variability is imposed using ROMS harmonic tidal forcing from OTPS and sub-tidal conditions are imposed by filtering high frequencies out the NCOM regional solution. Special focus is given to the latter approach, where the nudging time scales and the boundary update frequency play an important role in the evolution of the ocean state for short 3-day forecasts. A spectral analysis of the sea surface height and barotropic velocity is performed via Fourier's transform, continuous 1-D wavelet transforms, and classic harmonic analysis. Tide signals are then reconstructed and removed from the OBC's in 3 ways: 1) using Rich Pawlowicz's t_tide package (classic harmonic analysis), 2) with traditional band-pass filters (e.g. Lanczos) and 3) using Proper Orthogonal Decomposition. The tide filtering approach shows great improvement in the high frequency response of tidal motions at the open boundaries. Results are validated with NOAA tide gauges, Acoustic Doppler Current Profilers, High Frequency Radars (6km and 2km resolution). A floating drifter experiment is performed in coastal zones, in which 12 drifters were deployed at different coastal zones and tracked for several days. The results show an improvement of the forecast skill with the proper implementation of the tide filtering approach by adjusting the nudging time scales and adequately removing the tidal signals. Significant improvement is found in the tracking skill of the floating drifters for the one-way grid and the two-way nested application also shows some improvement over the offline downscaling approach at higher resolutions.

Benthic foraminiferal assemblages and microfacies analysis of the Upper Cretaceous-Paleocene (?) platform carbonate sequence in the Central Taurides, S Turkey

NASA Astrophysics Data System (ADS)

Solak, Cemile; Taslı, Kemal; Koç, Hayati

2017-04-01

The Upper Cretaceous succession outcropping in the area known as Anamas-Akseki Autochton or Geyikdaǧı Unit, which is situated western part of the Central Taurides, consists of approximately 500 m thick purely platform carbonate sediments. Integrated microfacies/facies studies and biostratigraphic analysis of the Kuyucak stratigraphic section provided to recognise depositional settings and benthic foraminiferal biozones. The Upper Cretaceous begins with Cenomanian limestones intercalated with limestone breccias (Unit 1) containing mainly Pseudorhapydionina dubia, Cuneolina pavonia, Nezzazata simplex (Association 1) and unconformably overlies the Lower Cretaceous (Barremian-Aptian) limestones with Vercorsella laurentii, Praechrysalidina infracretacea and Salpingoporella hasi. The Cenomanian limestones include benthic foraminiferal packstone/wackestone, peloidal packstone/wackestone and mudstone microfacies deposited restricted platform conditions. Intercalations of emersion breccias suggest sporadic subaerial exposure of the platform. The Cenomanian succession are truncated by an unconformity characterised by locale bauxite infills. Immediately above the unconformable surface, dolomitic limestones and rudistid limestones (Unit 2) are assigned to the upper Campanian based on the benthic foraminiferal assemblage (Association 2) comprising mainly Murciella cuvillieri, Pseudocyclammina sphaeroidea, Accordiella conica, Scandonea samnitica and Fleuryana adriatica. The upper Campanian limestones composed of dominantly benthic foraminiferal packstone/wackestone microfacies deposited in shallow water environments with low water energy, subjected to restriction in water circulation, The following limestones of the Unit 2 is characterised by sporadic intercalation of "open shelf" Orbitoides, Omphalocyclus, Siderolites assemblage (Association 3), assigned to the Maastrichtian, in addition to pre-existing "restricted platform" species. Pseudedomia hekimhanensis and Helenocyclina beotica are occasionally accompanied this association. In the upper half of this biozone, the Rhapydionina liburnica subzone (Association 3b) is distinguished by the first occurences of Valvulina aff. triangularis, Loftusia minor as well as the nominal species. The Maastrichtian limestones with sporadically open marine influence consist mostly of bioclastic/microbioclastic (rudist-bearing) wackestone/packstone/grainstone, benthic foraminiferal packstone/wackestone with rudist fragments and peloidal/intraclastic packstone/wackestone microfacies deposited in shallow subtidal-subtidal (lagoonal) environments characterised by different hydrodynamic regimes (low to high energy). The Upper Cretaceous succession passes upwardly into 70 meters thick limestones and clayey limestones (Unit 3) which do not contain rudists and pre-existing foraminiferal assemblage with one exception Valvulina aff. triangularis. Variable amounts of ostracoda, Discorbidae, Miliolidae, dasycladacean algae and Stomatorbina sp. (Association 4) occur into muddy-rich microfacies suggesting restricted conditions with low water energy. A probable Paleocene age is proposed for the Unit 3 based on the occurence of Valvulina aff. triangularis and Stomatorbina sp. which were previously recorded from Paleocene of peri-Tethian platforms. The Upper Cretaceous-Paleocene(?) platform carbonate succession is unconformably overlain by conglomerate, limestone with Nummulites and siliciclastic sediments of the Eocene age. We thank to the Scientific and Technological Research Council of Turkey (TUBITAK) for a financial support with project no:115Y130.

Computer-based three-dimensional reconstruction of the anatomy of Microhedyle remanei (Marcus, 1953), an interstitial acochlidian gastropod from Bermuda.

PubMed

Neusser, Timea P; Hess, Martin; Haszprunar, Gerhard; Schrödl, Michael

2006-02-01

Phylogenetic analysis of the highly enigmatic and aberrant acochlidian opisthobranch gastropods is mainly hindered by the lack of reliable anatomical data. Due to their small size, marine interstitial acochlidian species are not suitable for anatomical investigations by dissecting. The tinyness and complexity of, e.g., opisthobranch central nervous and reproductive systems make data derived from older paraffin-based histology and interpretation by hand-based graphical reconstruction questionable. In a former study, a hermaphroditic member of the basal acochlidian genus Hedylopsis ("Hedylopsacea") has been examined in detail. The present study uses the gonochoric Microhedyle remanei (Microhedylidae) as a model organism of the other traditional major acochlidian subgroup, the "Microhedylacea." More than 20 specimens with up to 2 mm body length were extracted from coarse subtidal sand near Castle Roads, Bermuda Islands. Their central nervous, digestive, circulatory, excretory, and genital systems were reconstructed three-dimensionally from serial semithin histological sections using AMIRA software. The radula was analyzed by SEM. Our specimens closely resemble the original description of M. remanei (Marcus, 1953; as Unela) from Brazil; apparent differences regarding the number of visceral loop ganglia or details of male genitalia are assumed to be due to oversights by the former author or because of different ontogenetic stages. Microhedyle remanei differs from all congeners due to the lack (vs. presence) of eyes; further distinguishing features are discussed. In contrast to members of the hedylopsacean Hedylopsidae, Acochlidiidae, and Tantulidae, M. remanei shows a nervous system with numerous precerebral accessory "ganglia" that are not differentiated into cortex and medulla. While all Microhedylidae previously were thought to lack a heart, M. remanei shows a two-chambered heart, as is usual for opisthobranchs. The oocytes of M. remanei are yolky and large in relation to body size and suggest intracapsular larval development. A comparative microanatomical discussion and the distribution of characters within acochlidian taxa indicate that the current classification of the Acochlidia does not reflect phylogenetic relationships. Detailed structural investigations on further poorly known species are required; the computer-based 3D reconstruction of semithin serial sections with AMIRA is shown to be an ideal tool for efficient analysis and presentation of the microanatomy of small specimens. (c) 2005 Wiley-Liss, Inc.

Living on a trophic subsidy: Algal quality drives an upper-shore herbivore’s consumption, preference and absorption but not growth rates

PubMed Central

Quintanilla-Ahumada, Diego; Quijón, Pedro A.; Navarro, Jorge M.; Pulgar, José

2018-01-01

The transfer of seaweeds from subtidal bottoms to nearby intertidal rocky shores is a common but often overlooked phenomenon. Freshly detached seaweeds often represent critical trophic subsidies for herbivores living in upper-shore rocky intertidal areas, such as the marine snail Diloma nigerrima. This species relies on three species of seaweeds for food and displays feeding strategies to deal with a resource that is scarce and at times unpredictable. This study focused on the nutritional quality of freshly detached algae (Durvillaea antarctica, Lessonia spicata and Lessonia trabeculata) and measured Diloma nigerrima’s algal consumption rates in trials with and without choice. Absorption efficiency and growth of individual snails fed on each alga were also measured. Durvillaea antarctica had the highest nutritional quality and was the most consumed algae in both single and multiple-choice trials. Absorption efficiency was also highest for D. antarctica but growth rates of snails fed with this species were similar to those fed with the other algae. Combined, these results suggest that D. nigerrima has the ability to discriminate among seaweeds based on their nutritional quality. A potential increase in oxygen uptake when D. nigerrima is consuming the preferred food item is also proposed as a plausible hypothesis to explain the mismatch between snails’ preference and growth rate. These results aim to guide further studies on trophic subsidies and their role in coastal systems. PMID:29672599

Phase-Shift Dynamics of Sea Urchin Overgrazing on Nutrified Reefs.

PubMed

Kriegisch, Nina; Reeves, Simon; Johnson, Craig R; Ling, Scott D

2016-01-01

Shifts from productive kelp beds to impoverished sea urchin barrens occur globally and represent a wholesale change to the ecology of sub-tidal temperate reefs. Although the theory of shifts between alternative stable states is well advanced, there are few field studies detailing the dynamics of these kinds of transitions. In this study, sea urchin herbivory (a 'top-down' driver of ecosystems) was manipulated over 12 months to estimate (1) the sea urchin density at which kelp beds collapse to sea urchin barrens, and (2) the minimum sea urchin density required to maintain urchin barrens on experimental reefs in the urbanised Port Phillip Bay, Australia. In parallel, the role of one of the 'bottom-up' drivers of ecosystem structure was examined by (3) manipulating local nutrient levels and thus attempting to alter primary production on the experimental reefs. It was found that densities of 8 or more urchins m-2 (≥ 427 g m-2 biomass) lead to complete overgrazing of kelp beds while kelp bed recovery occurred when densities were reduced to ≤ 4 urchins m-2 (≤ 213 g m-2 biomass). This experiment provided further insight into the dynamics of transition between urchin barrens and kelp beds by exploring possible tipping-points which in this system can be found between 4 and 8 urchins m-2 (213 and 427 g m-2 respectively). Local enhancement of nutrient loading did not change the urchin density required for overgrazing or kelp bed recovery, as algal growth was not affected by nutrient enhancement.

Phytoplankton bloom dynamics in temperate, turbid, stressed estuaries: a model study

NASA Astrophysics Data System (ADS)

de Swart, Huib E.; Liu, Bo; de Jonge, Victor

2017-04-01

To gain insight into mechanisms underlying phytoplankton bloom dynamics in temperature, turbid estuaries, experiments were conducted with an idealised model that couples physical and biological processes. Results show that the model is capable of producing the main features of the observed blooms in the Ems estuary (Northwest Germany), viz. in the lower reach a spring bloom occur, which is followed by a secondary bloom in autumn. The along-estuary distribution of suspended sediment concentration (SSC) and the along-estuary distance between the nutrient source and the seaward bound of the turbidity zone control both the along-estuary locations and intensities of the blooms. Results of further sensitivity studies reveal that in a shallow, well-mixed estuary, under temporally-constant suspended sediment conditions, the seasonally-varying water temperature has larger impact on the timing of spring blooms than the seasonally-varying incident light intensity. The occurrence of the secondary bloom is caused by the fact that the growth rate of phytoplankton attains a maximum at an optimum water temperature. Bloom intensities are also modulated by the advective processes related to subtidal current because the latter regulates the seaward transport of nutrient from riverine source. Large-scale deepening of navigation channels leads to later spring blooms due to increased mixing depth. Finally, phytoplankton blooms are unlikely to occur in the upper reach due to the elevated SSC and the landward expansion of turbidity zone related to large-scale deepening.

Decomposition of jellyfish carrion in situ: Short-term impacts on infauna, benthic nutrient fluxes and sediment redox conditions.

PubMed

Chelsky, Ariella; Pitt, Kylie A; Ferguson, Angus J P; Bennett, William W; Teasdale, Peter R; Welsh, David T

2016-10-01

Jellyfish often form blooms that persist for weeks to months before they collapse en masse, resulting in the sudden release of large amounts of organic matter to the environment. This study investigated the biogeochemical and ecological effects of the decomposition of jellyfish in a shallow coastal lagoon in New South Wales, Australia. Catostylus mosaicus carrion was added to the surface of shallow sub-tidal sediments and biogeochemical parameters and macrofaunal abundance immediately below the jellyfish carrion were measured over three days. Sediment plots without jellyfish served as controls. Sediment oxygen demand and carbon and nitrogen efflux increased by up to 60-fold in the jellyfish plots, compared to control plots, and dissolved organic nutrient fluxes were more sustained than in previous studies due to the use of fresh rather than frozen biomass. The decomposing jellyfish progressively altered sediment redox conditions, indicated by an increase in porewater iron (II) and sulfide concentrations measured by high-resolution in situ diffusive samplers. Abundance of some macrofaunal taxa in the jellyfish plots decreased relative to controls, however, the abundance of a carnivorous gastropod, which was presumably feeding on the carrion, increased in the jellyfish plots. While jellyfish carrion may be a food source for some macrofauna, low oxygen conditions coupled with the accumulation of toxic dissolved sulfides in the near-surface sediments may explain the overall change in the macroinfaunal community. Copyright © 2016 Elsevier B.V. All rights reserved.

Benthic marine calcifiers coexist with CaCO3-undersaturated seawater worldwide

NASA Astrophysics Data System (ADS)

Lebrato, M.; Andersson, A. J.; Ries, J. B.; Aronson, R. B.; Lamare, M. D.; Koeve, W.; Oschlies, A.; Iglesias-Rodriguez, M. D.; Thatje, S.; Amsler, M.; Vos, S. C.; Jones, D. O. B.; Ruhl, H. A.; Gates, A. R.; McClintock, J. B.

2016-07-01

Ocean acidification and decreasing seawater saturation state with respect to calcium carbonate (CaCO3) minerals have raised concerns about the consequences to marine organisms that build CaCO3 structures. A large proportion of benthic marine calcifiers incorporate Mg2+ into their skeletons (Mg-calcite), which, in general, reduces mineral stability. The relative vulnerability of some marine calcifiers to ocean acidification appears linked to the relative solubility of their shell or skeletal mineralogy, although some organisms have sophisticated mechanisms for constructing and maintaining their CaCO3 structures causing deviation from this dependence. Nevertheless, few studies consider seawater saturation state with respect to the actual Mg-calcite mineralogy (ΩMg-x) of a species when evaluating the effect of ocean acidification on that species. Here, a global dataset of skeletal mole % MgCO3 of benthic calcifiers and in situ environmental conditions spanning a depth range of 0 m (subtidal/neritic) to 5600 m (abyssal) was assembled to calculate in situ ΩMg-x. This analysis shows that 24% of the studied benthic calcifiers currently experience seawater mineral undersaturation (ΩMg-x < 1). As a result of ongoing anthropogenic ocean acidification over the next 200 to 3000 years, the predicted decrease in seawater mineral saturation will expose approximately 57% of all studied benthic calcifying species to seawater undersaturation. These observations reveal a surprisingly high proportion of benthic marine calcifiers exposed to seawater that is undersaturated with respect to their skeletal mineralogy, underscoring the importance of using species-specific seawater mineral saturation states when investigating the impact of CO2-induced ocean acidification on benthic marine calcification.

Sources of Nutrients to Nearshore Areas of a Eutrophic Estuary: Implications for Nutrient-Enhanced Acidification in Puget Sound

NASA Astrophysics Data System (ADS)

Pacella, S. R.

2016-02-01

Ocean acidification has recently been highlighted as a major stressor for coastal organisms. Further work is needed to assess the role of anthropogenic nutrient additions in eutrophied systems on local biological processes, and how this interacts with CO2 emission-driven acidification. This study sought to distinguish changes in pH caused by natural versus anthropogenically affected processes. We quantified the variability in water column pH attributable to primary production and respiration fueled by anthropogenically derived nitrogen in a shallow nearshore area. Two study sites were located in shallow subtidal areas of the Snohomish River estuary, a eutrophic system located in central Puget Sound, Washington. These sites were chosen due to the presence of heavy agricultural activity, urbanized areas with associated waste water treatment, as well as influence from deep, high CO2 marine waters transported through the Strait of Juan de Fuca and upwelled into the area during spring and summer. Data was collected from July-December 2015 utilizing continuous moorings and discrete water column sampling. Analysis of stable isotopes, δ15N, δ18O-NO3, δ15N-NH4, was used to estimate the relative contributions of anthropogenic versus upwelled marine nitrogen sources. Continuous monitoring of pH, dissolved oxygen, temperature, and salinity was conducted at both study sites to link changes in nutrient source and availability with changes in pH. We predicted that isotope data would indicate greater contributions of nitrogen from agriculture and wastewater rather than upwelling in the shallow, nearshore study sites. This study seeks to distinguish the relative magnitude of pH change stimulated by anthropogenic versus natural sources of nitrogen to inform public policy decisions in critically important nearshore ecosystems.

Inorganic carbon availability in benthic diatom communities: photosynthesis and migration.

PubMed

Marques da Silva, Jorge; Cruz, Sónia; Cartaxana, Paulo

2017-09-05

Diatom-dominated microphytobenthos (MPB) is the main primary producer of many intertidal and shallow subtidal environments, being therefore of critical importance to estuarine and coastal food webs. Owing to tidal cycles, intertidal MPB diatoms are subjected to environmental conditions far more variable than the ones experienced by pelagic diatoms (e.g. light, temperature, salinity, desiccation and nutrient availability). Nevertheless, benthic diatoms evolved adaptation mechanisms to these harsh conditions, including the capacity to move within steep physical and chemical gradients, allowing them to perform photosynthesis efficiently. In this contribution, we will review present knowledge on the effects of dissolved inorganic carbon (DIC) availability on photosynthesis and productivity of diatom-dominated MPB. We present evidence of carbon limitation of photosynthesis in benthic diatom mats and highly productive MPB natural communities. Furthermore, we hypothesize that active vertical migration of epipelic motile diatoms could overcome local depletion of DIC in the photic layer, providing the cells alternately with light and inorganic carbon supply. The few available longer-term experiments on the effects of inorganic carbon enrichment on the productivity of diatom-dominated MPB have yielded inconsistent results. Therefore, further studies are needed to properly assess the response of MPB communities to increased CO 2 and ocean acidification related to climate change.This article is part of the themed issue 'The peculiar carbon metabolism in diatoms'. © 2017 The Author(s).

Isolation, expression and characterization of rbcL gene from Ulva prolifera J. Agardh (Ulvophyceae, Chlorophyta)

NASA Astrophysics Data System (ADS)

Shao, Zhanru; Li, Wei; Guo, Hui; Duan, Delin

2015-12-01

Ulva prolifera is a typical green alga in subtidal areas and can grow tremendously fast. A highly efficient Rubisco enzyme which is encoded by UpRbcL gene may contribute to the rapid growth. In this study, the full-length UpRbcL open reading frame (ORF) was identified, which encoded a protein of 474 amino acids. Phylogenetic analysis of UpRbcL sequences revealed that Chlorophyta had a closer genetic relationship with higher plants than with Rhodophyta and Phaeophyta. The two distinct residues (aa11 and aa91) were presumed to be unique for Rubisco catalytic activity. The predicted three-dimensional structure showed that one α/β-barrel existed in the C-terminal region, and the sites for Mg2+ coordination and CO2 fixation were also located in this region. Gene expression profile indicated that UpRbcL was expressed at a higher level under light exposure than in darkness. When the culture temperature reached 35°C, the expression level of UpRbcL was 2.5-fold lower than at 15°C, and the carboxylase activity exhibited 13.8-fold decrease. UpRbcL was heterologously expressed in E. coli and was purified by Ni2+ affinity chromatography. The physiological and biochemical characterization of recombinant Rubisco will be explored in the future.

Observations of internal bores and waves of elevation on the New England inner continental shelf during summer 2001

NASA Astrophysics Data System (ADS)

Pritchard, Mark; Weller, Robert A.

2005-03-01

During July-August 2001, oceanographic variability on the New England inner continental shelf was investigated with an emphasis on temporal scales shorter than tidal periods. Mooring and ship survey data showed that subtidal variation of inner shelf stratification was in response to regional Ekman upwelling and downwelling wind driven dynamics. High-frequency variability in the vertical structure of the water column at an offshore mooring site was linked to the baroclinic internal tide and the onshore propagation of nonlinear solitary waves of depression. Temperature, salinity, and velocity data measured at an inshore mooring detected a bottom bore that formed on the flood phase of the tide. During the ebb tide, a second bottom discontinuity and series of nonlinear internal waves of elevation (IWOE) formed when the water column became for a time under hydraulic control. A surface manifestation of these internal wave crests was also observed in aircraft remote sensing imagery. The coupling of IWOE formation to the offshore solitary waves packets was investigated through internal wave breaking criterion derived in earlier laboratory studies. Results suggested that the offshore solitons shoaled on the sloping shelf, and transformed from waves of depression to waves of elevation. The coupling of inshore bore formation to the offshore solitary waves and the possible impact of these periodic features on mixing on the inner shelf region are discussed.

Effects of shelter and enrichment on the ecology and nutrient cycling of microbial communities of subtidal carbonate sediments.

PubMed

Forehead, Hugh I; Kendrick, Gary A; Thompson, Peter A

2012-04-01

The interactions between physical disturbances and biogeochemical cycling are fundamental to ecology. The benthic microbial community controls the major pathway of nutrient recycling in most shallow-water ecosystems. This community is strongly influenced by physical forcing and nutrient inputs. Our study tests the hypotheses that benthic microbial communities respond to shelter and enrichment with (1) increased biomass, (2) change in community composition and (3) increased uptake of inorganic nutrients from the water column. Replicate in situ plots were sheltered from physical disturbance and enriched with inorganic nutrients or left without additional nutrients. At t(0) and after 10 days, sediment-water fluxes of nutrients, O(2) and N(2) , were measured, the community was characterized with biomarkers. Autochthonous benthic microalgal (BMA) biomass increased 30% with shelter and a natural fivefold increase in nutrient concentration; biomass did not increase with greater enrichment. Diatoms remained the dominant taxon of BMA, suggesting that the sediments were not N or Si limited. Bacteria and other heterotrophic organisms increased with enrichment and shelter. Daily exchanges of inorganic nutrients between sediments and the water column did not change in response to shelter or nutrient enrichment. In these sediments, physical disturbance, perhaps in conjunction with nutrient enrichment, was the primary determinant of microbial biomass. © 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Sub-tidal Circulation in a deep-silled fjord: Douglas Channel, British Columbia (Canada)

NASA Astrophysics Data System (ADS)

Wan, Di; Hannah, Charles; Foreman, Mike

2016-04-01

Douglas Channel, a deep fjord on the west coast of British Columbia, Canada, is the main waterway in Kitimat fjord system that opens to Queen Charlotte Sound and Hecate Strait. The fjord is separated from the open shelf by a broad sill that is about 150 m deep, and there is another sill (200 m) that separates the fjord into an outer and an inner basin. This study examines the low-frequency (from seasonal to meteorological bands) circulation in Douglas Channel from data collected from three moorings deployed during 2013-2015, and the water property observations collected during six cruises (2014 and 2015). Estuarine flow dominates the circulation above the sill-depth. The deep flows are dominated by a yearly renewal that takes place from early June to September, and this dense water renews both basins in the form of gravity currents at 0.1 - 0.2 m/s with a thickness of 100 m. At other times of the year, the deep flow structures and water properties suggest horizontal and vertical processes and support the re-circulation idea in the inner and the outer basins. The near surface current velocity fluctuations are dominated by the along-channel wind. Overall, the circulation in the meteorological band is a mix of the estuarine flow, direct wind driven flow, and the baroclinic response to changes to the surface pressure gradient caused by the wind driven currents.

Effects of seawater acidification on early development of the intertidal sea urchin Paracentrotus lividus (Lamarck 1816).

PubMed

Moulin, Laure; Catarino, Ana Isabel; Claessens, Thomas; Dubois, Philippe

2011-01-01

The effect of pH ranging from 8.0 to 6.8 (total scale - pH(T)) on fertilization, cleavage and larval development until pluteus stage was assessed in an intertidal temperate sea urchin. Gametes were obtained from adults collected in two contrasting tide pools, one showing a significant nocturnal pH decrease (lowest pH(T)=7.4) and another where pH was more stable (lowest pH(T)=7.8). The highest pH(T) at which significant effects on fertilization and cleavage were recorded was 7.6. On the contrary, larval development was only affected below pH(T) 7.4, a value equal or lower than that reported for several subtidal species. This suggests that sea urchins inhabiting stressful intertidal environments produce offspring that may better resist future ocean acidification. Moreover, at pH(T) 7.4, the fertilization rate of gametes whose progenitors came from the tide pool with higher pH decrease was significantly higher, indicating a possible acclimatization or adaptation of gametes to pH stress. Copyright © 2010 Elsevier Ltd. All rights reserved.

Microfossils from the Neoarchean Campbell Group, Griqualand West Sequence of the Transvaal Supergroup, and their paleoenvironmental and evolutionary implications

NASA Technical Reports Server (NTRS)

Altermann, W.; Schopf, J. W.

1995-01-01

The oldest filament- and colonial coccoid-containing microbial fossil assemblage now known is described here from drill core samples of stromatolitic cherty limestones of the Neoarchean, approximately 2600-Ma-old Campbell Group (Ghaap Plateau Dolomite, Lime Acres Member) obtained at Lime Acres, northern Cape Province, South Africa. The assemblage is biologically diverse, including entophysalidacean (Eoentophysalis sp.), probable chroococcacean (unnamed colonial coccoids), and oscillatoriacean cyanobacteria (Eomycetopsis cf. filiformis, and Siphonophycus transvaalensis), as well as filamentous fossil bacteria (Archaeotrichion sp.); filamentous possible microfossils (unnamed hematitic filaments) also occur. The Campbell Group microorganisms contributed to the formation of stratiform and domical to columnar stromatolitic reefs in shallow subtidal to intertidal environments of the Transvaal intracratonic sea. Although only moderately to poorly preserved, they provide new evidence regarding the paleoenvironmental setting of the Campbell Group sediments, extend the known time-range of entophysalidacean cyanobacteria by more than 400 million years, substantiate the antiquity and role in stromatolite formation of Archean oscillatoriacean cyanobacteria, and document the exceedingly slow (hypobradytelic) evolutionary rate characteristic of this early evolving prokaryotic lineage.

Topographic heterogeneity influences fish use of an experimentally restored tidal marsh.

PubMed

Larkin, Daniel J; Madon, Sharook P; West, Janelle M; Zedler, Joy B

2008-03-01

Ecological theory predicts that incorporating habitat heterogeneity into restoration sites should enhance diversity and key functions, yet research is limited on how topographic heterogeneity affects higher trophic levels. Our large (8-ha) southern California restoration experiment tested effects of tidal creek networks and pools on trophic structure of salt marsh habitat and high-tide use by two regionally dominant fish species, California killifish (Fundulus parvipinnis) and longjaw mudsucker (Gillichthys mirabilis). We expected tidal creeks to function as "conduits" that would enhance connectivity between subtidal and intertidal habitat and pools to serve as microhabitat "oases" for fishes. Pools did provide abundant invertebrate prey and were a preferred microhabitat for F. parvipinnis, even when the entire marsh was inundated (catch rates were 61% higher in pools). However, G. mirabilis showed no preference for pools. At a larger scale, effects of tidal creek networks were also mixed. Areas containing creeks had 12% higher catch rates of G. mirabilis, but lower catch rates and feeding rates of F. parvipinnis. Collectively, the results indicate that restoring multiple forms of heterogeneity is required to provide opportunities for multiple target consumers.

Modeling the seasonal circulation in Massachusetts Bay

USGS Publications Warehouse

Signell, Richard P.; Jenter, Harry L.; Blumberg, Alan F.; ,

1994-01-01

An 18 month simulation of circulation was conducted in Massachusetts Bay, a roughly 35 m deep, 100??50 km embayment on the northeastern shelf of the United States. Using a variant of the Blumberg-Mellor (1987) model, it was found that a continuous 18 month run was only possible if the velocity field was Shapiro filtered to remove two grid length energy that developed along the open boundary due to mismatch in locally generated and climatologically forced water properties. The seasonal development of temperature and salinity stratification was well-represented by the model once ??-coordinate errors were reduced by subtracting domain averaged vertical profiles of temperature, salinity and density before horizontal differencing was performed. Comparison of modeled and observed subtidal currents at fixed locations revealed that the model performance varies strongly with season and distance from the open boundaries. The model performs best during unstratified conditions, and in the interior of the bay. The model performs poorest during stratified conditions and in the regions where the bay is driven predominantly by remote fluctuations from the Gulf of Maine.

A method to assess the evolution and recovery of heavy metal pollution in estuarine sediments: Past history, present situation and future perspectives.

PubMed

Bárcena, Javier F; Claramunt, Inigo; García-Alba, Javier; Pérez, María Luisa; García, Andrés

2017-11-15

A methodology to assess the historical evolution and recovery of heavy metal pollution in estuarine sediments was developed and is presented here. This approach quantifies the distribution of heavy metals in sediment cores, and investigates the influence of anthropogenic activities and/or core locations on the heavy metal pollution, by proposing and using sediment quality indices and polynomial regressions. The method has been applied to the Suances Estuary confirming its suitability as a comprehensive and practical management tool. In this estuary, the evolution of heavy metal pollution (since 1997-1998 to 2015) pointed out the deeper the sediments, the more polluted, indicating a recovery at the upper layers due to the closure and ending of washing discharges from mining, and the reduction of metal loads from industrial wastewaters. In terms of global pollution, the intertidal and subtidal sediments will require 43.1±2.8 and 8.6±0.6years to be unpolluted, respectively. Copyright © 2017 Elsevier Ltd. All rights reserved.

Internal gravity wave contributions to global sea surface variability

NASA Astrophysics Data System (ADS)

Savage, A.; Arbic, B. K.; Richman, J. G.; Shriver, J. F.; Buijsman, M. C.; Zamudio, L.; Wallcraft, A. J.; Sharma, H.

2016-02-01

High-resolution (1/12th and 1/25th degree) 41-layer simulations of the HYbrid Coordinate Ocean Model (HYCOM), forced by both atmospheric fields and the astronomical tidal potential, are used to construct global maps of sea-surface height (SSH). The HYCOM output has been separated into steric, non-steric, and total sea-surface height and the maps display variance in subtidal, tidal, and supertidal bands. Two of the global maps are of particular interest in planning for the upcoming Surface Water and Ocean Topography (SWOT) wide-swath satellite altimeter mission; (1) a map of the nonstationary tidal signal (estimated after removing the stationary tidal signal via harmonic analysis), and (2) a map of the steric supertidal contributions, which are dominated by the internal gravity wave continuum. Both of these maps display signals of order 1 cm2, the target accuracy for the SWOT mission. Therefore, both non-stationary internal tides and non-tidal internal gravity waves are likely to be important sources of "noise" that must be accurately removed before examination of lower-frequency phenomena can take place.

The effects of wastewater effluent and river discharge on benthic heterotrophic production, organic biomass and respiration in marine coastal sediments.

PubMed

Burd, B; Macdonald, T; Bertold, S

2013-09-15

We examine effects of high river particulate flux and municipal wastewater effluent on heterotrophic organic carbon cycling in coastal subtidal sediments. Heterotrophic production was a predictable (r(2)=0.95) proportion (56%) of oxidized OC flux and strongly correlated with organic/inorganic flux. Consistent growth efficiencies (36%) occurred at all stations. Organic biomass was correlated with total, OC and buried OC fluxes, but not oxidized OC flux. Near the river, production was modest and biomass high, resulting in low P/B. Outfall deposition resulted in depleted biomass and high bacterial production, resulting in the highest P/B. These patterns explain why this region is production "saturated". The δ(15)N in outfall effluent, sediments and dominant taxa provided insight into where, and which types of organisms feed directly on fresh outfall particulates, on older, refractory material buried in sediments, or utilize chemosynthetic symbiotic bacteria. Results are discussed in the context of declining bottom oxygen conditions along the coast. Crown Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

The impact of a high magnitude flood on metal pollution in a shallow subtropical estuarine embayment.

PubMed

Coates-Marnane, J; Olley, J; Burton, J; Grinham, A

2016-11-01

Drought-breaking floods pose a risk to coastal water quality as sediments, nutrients, and pollutants stored within catchments during periods of low flow are mobilized and delivered to coastal waters within a short period of time. Here we use subtidal surface sediment surveys and sediment cores to explore the effects of the 2011 Brisbane River flood on trace metals zinc (Zn), lead (Pb), copper (Cu), nickel (Ni), chromium (Cr), manganese (Mn), and phosphorus (P) deposition in Moreton Bay, a shallow subtropical bay in eastern Australia. Concentrations of Zn, Cu, and Pb in sediments in central Moreton Bay derived from the 2011 flood were the highest yet observed in the Bay. We suggest flushing of metal rich sediments which had accumulated on the Brisbane River floodplain and in its estuary during the preceding 10 to 40years of low flows to be the primary source of this increase. This highlights the importance of intermittent high magnitude floods in tidally influenced rivers in controlling metal transport to coastal waters in subtropical regions. Copyright © 2016. Published by Elsevier B.V.

Building 'blue': An eco-engineering framework for foreshore developments.

PubMed

Mayer-Pinto, M; Johnston, E L; Bugnot, A B; Glasby, T M; Airoldi, L; Mitchell, A; Dafforn, K A

2017-03-15

Urbanisation in terrestrial systems has driven architects, planners, ecologists and engineers to collaborate on the design and creation of more sustainable structures. Examples include the development of 'green infrastructure' and the introduction of wildlife corridors that mitigate urban stressors and provide positive ecological outcomes. In contrast, efforts to minimise the impacts of urban developments in marine environments have been far more restricted in their extent and scope, and have often overlooked the ecological role of the built environment as potential habitat. Urban foreshore developments, i.e. those built on the interface of intertidal and/or subtidal zones, have the potential to incorporate clear multi-functional outcomes, by supporting novel ecosystems. We present a step-by-step eco-engineering framework for 'building blue' that will allow coastal managers to facilitate planning and construction of sustainable foreshore developments. Adopting such an approach will incorporate ecological principles, thereby mitigating some of the environmental impacts, creating more resilient urban infrastructure and environments, and maximising benefits to the multiple stakeholders and users of marine urban waterfronts. Copyright © 2016 Elsevier Ltd. All rights reserved.

Temporal changes in the abundance, leaf growth and photosynthesis of three co-occurring Philippine seagrasses.

PubMed

Agawin, N S.R.; Duarte, C M.; Fortes, M D.; Uri, J S.; Vermaat, J E.

2001-06-01

The analysis of the temporal changes in shoot density, areal leaf biomass, leaf growth and parameters of the photosynthesis-irradiance relationship of three tropical seagrass species (Enhalus acoroides, Thalassia hemprichii and Cymodocea rotundata), co-existing in a shallow subtidal meadow in Cape Bolinao, Philippines, shows that species-specific traits are significant sources of temporal variability, and indicates that these seagrass species respond differently to a common environmental forcing. Species-specific differences are much less important as source of variability of the temporal change in chlorophyll concentration of seagrass leaves. The results indicate that the temporal changes in photosynthetic performance of these seagrasses were driven by environmental forcing and their specific responses to it mostly, but the temporal change in their abundance and leaf growth was also controlled by other factors. The significant contribution of species-specific factors in the temporal changes of biomass, growth and photosynthetic performance of co-occurring seagrass species in Cape Bolinao should contribute to the maintenance of the multispecific, highly productive meadows characteristic of pristine coastal ecosystems in Southeast (SE) Asia.

Paleobiology of a Neoproterozoic tidal flat/lagoonal complex: the Draken Conglomerate Formation, Spitsbergen.

PubMed

Knoll, A H; Swett, K; Mark, J

1991-01-01

Carbonates and rare shales of the ca 700-800 Ma old Draken Conglomerate Formation, northeastern Spitsbergen, preserve a record of environmental variation within a Neoproterozoic tidal flat/lagoon complex. Forty-two microfossil taxa have been recognized in Draken rocks, and of these, 39 can be characterized in terms of their paleoenvironmental distributions along a gradient from the supratidal zone to permanently submerged lagoons. Supratidal to subtidal trends include: increasing microbenthic diversity, increasing abundance and diversity of included allochthonous (presumably planktonic) elements, decreasing sheath thickness of mat-building organisms (with significant taphonomic consequences), and an increasing sediment/fossil ratio in fossiliferous rocks. Five principal and several minor biofacies can be distinguished. The paleoecological resolution obtainable in the Draken Conglomerate Formation rivals that achieved for most Phanerozoic fossil deposits. It documents the complexity and diversity of Proterozoic coastal ecosystems and indicates that both environment and taphonomy need to be taken into explicit consideration in attempts to understand evolutionary trends in early fossil record. Three species, Coniunctiophycus majorinum, Myxococcoides distola, and M. chlorelloidea, are described as new; Siphonophycus robustum, Siphonophycus septatum, and Gorgonisphaeridium maximum are proposed as new combinations.

Paleobiology of a Neoproterozoic tidal flat/lagoonal complex: the Draken Conglomerate Formation, Spitsbergen

NASA Technical Reports Server (NTRS)

Knoll, A. H.; Swett, K.; Mark, J.

1991-01-01

Carbonates and rare shales of the ca 700-800 Ma old Draken Conglomerate Formation, northeastern Spitsbergen, preserve a record of environmental variation within a Neoproterozoic tidal flat/lagoon complex. Forty-two microfossil taxa have been recognized in Draken rocks, and of these, 39 can be characterized in terms of their paleoenvironmental distributions along a gradient from the supratidal zone to permanently submerged lagoons. Supratidal to subtidal trends include: increasing microbenthic diversity, increasing abundance and diversity of included allochthonous (presumably planktonic) elements, decreasing sheath thickness of mat-building organisms (with significant taphonomic consequences), and an increasing sediment/fossil ratio in fossiliferous rocks. Five principal and several minor biofacies can be distinguished. The paleoecological resolution obtainable in the Draken Conglomerate Formation rivals that achieved for most Phanerozoic fossil deposits. It documents the complexity and diversity of Proterozoic coastal ecosystems and indicates that both environment and taphonomy need to be taken into explicit consideration in attempts to understand evolutionary trends in early fossil record. Three species, Coniunctiophycus majorinum, Myxococcoides distola, and M. chlorelloidea, are described as new; Siphonophycus robustum, Siphonophycus septatum, and Gorgonisphaeridium maximum are proposed as new combinations.

Grounding of the Bahia Paraiso at Arthur Harbor, Antarctica. 1. Distribution and fate of oil spill related hydrocarbons

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kennicutt, M.C. II; Sweet, S.T.; Fraser, W.R.

1991-03-01

In January to March 1989 water, organisms, and sediments within a 2-mile radius of Arthur Harbor were contaminated with an estimated 600,000 L of petroleum spilled by the Bahia Paraiso. All components of the ecosystem were contaminated to varying degrees during the spill, including birds, limpets, macroalgae, clams, bottom-feeding fish, and sediments. The high-energy environment, the relatively small volume of material released, and the volatility of the released product all contributed to limiting toxic effects in time and space. The most effective removal processes were evaporation, dilution, winds, and currents. Sedimentation, biological uptake, microbial oxidation, and photooxidation accounted for removalmore » of only a minor portion of the spill. One year after the spill several areas still exhibited contamination. Subtidal sediments and the more distant intertidal locations were devoid of detectable PAH contaminants whereas sediments near the docking facility at Palmer Station continued to reflect localized nonspill-related activities in the area. Arthur Harbor and adjacent areas continue to be chronically exposed to low-level petroleum contamination emanating from the Bahia Paraiso.« less

Seasonal changes in infaunal community structure in a hypertrophic brackish canal: Effects of hypoxia, sulfide, and predator-prey interaction.

PubMed

Kanaya, Gen; Nakamura, Yasuo; Koizumi, Tomoyoshi; Yamada, Katsumasa

2015-07-01

We conducted a one-year survey of macrozoobenthic community structure at 5 stations in a eutrophic canal in inner Tokyo Bay, focusing on the impacts of hypoxia, sediment H2S, and species interaction in the littoral soft-bottom habitats. Complete defaunation or decreasing density of less-tolerant taxa occurred under hypoxia during warmer months, especially at subtidal or sulfidic stations; this was followed by rapid recolonization by opportunistic polychaetes in fall-winter. Sedimentary H2S increased the mortality of macroinvertebrates under hypoxia or delayed population recovery during recolonization. The density of several polychaetes (e.g., Pseudopolydora reticulata) declined in winter, coincident with immigration of the predator Armandia lanceolata. This suggests that absence of A. lanceolata under moderate hypoxia enabled the proliferation of prey taxa. We conclude that oxygen concentration, sediment H2S, and hypoxia-induced changes in species interactions are potential drivers for spatiotemporal changes in macrozoobenthic assemblage structure in hypoxia-prone soft-bottom communities. Copyright © 2015 Elsevier Ltd. All rights reserved.

Seagrass Impact on Sediment Exchange Between Tidal Flats and Salt Marsh, and The Sediment Budget of Shallow Bays

NASA Astrophysics Data System (ADS)

Donatelli, Carmine; Ganju, Neil Kamal; Fagherazzi, Sergio; Leonardi, Nicoletta

2018-05-01

Seagrasses are marine flowering plants that strongly impact their physical and biological surroundings and are therefore frequently referred to as ecological engineers. The effect of seagrasses on coastal bay resilience and sediment transport dynamics is understudied. Here we use six historical maps of seagrass distribution in Barnegat Bay, USA, to investigate the role of these vegetated surfaces on the sediment storage capacity of shallow bays. Analyses are carried out by means of the Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) numerical modeling framework. Results show that a decline in the extent of seagrass meadows reduces the sediment mass potentially stored within bay systems. The presence of seagrass reduces shear stress values across the entire bay, including unvegetated areas, and promotes sediment deposition on tidal flats. On the other hand, the presence of seagrasses decreases suspended sediment concentrations, which in turn reduces the delivery of sediment to marsh platforms. Results highlight the relevance of seagrasses for the long-term survival of coastal ecosystems, and the complex dynamics regulating the interaction between subtidal and intertidal landscapes.

Marine botany. Second edition

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dawes, C.J.

Marine plants are a diverse group that include unicellular algae, seaweeds, seagrasses, salt marshes, and mangrove forests. They carry out a variety of ecological functions and serve as the primary producers in coastal wetlands and oceanic waters. The theme that connects such a wide variety of plants is their ecology, which was also emphasized in the 1981 edition. The goal of this revision is to present taxonomic, physiological, chemical, and ecological aspects of marine plants, their adaptations, and how abiotic and biotic factors interact in their communities. The data are presented in a concise, comparative manner in order to identifymore » similarities and differences between communities such as salt marsh and mangroves or subtidal seaweeds and seagrasses. To accomplish this, the text is organized into five chapters that introduce the marine habitats, consider abiotic and biotic factors, and anthropogenic influences on the communities followed by seven chapters that deal with microalgae, seaweeds, salt marshes, mangroves, seagrasses, and coral reefs. Two appendixes are included; one presents simple field techniques and the other is a summary of seaweed uses.« less

Response of rocky invertebrate diversity, structure and function to the vertical layering of vegetation

NASA Astrophysics Data System (ADS)

Bustamante, María; Tajadura, Javier; Gorostiaga, José María; Saiz-Salinas, José Ignacio

2014-06-01

Macroalgae comprise a prominent part of the rocky benthos where many invertebrates develop, and are believed to be undergoing severe declines worldwide. In order to investigate how the vegetation structure (crustose, basal and canopy layers) contributes to the diversity, structure and function of benthic invertebrates, a total of 31 subtidal transects were sampled along the northeast Atlantic coast of Spain. Significant positive relationships were found between the canopy layer and faunal abundance, taxonomic diversity and functional group diversity. Canopy forming algae were also related to epiphytic invertebrates, medium size forms, colonial strategy and suspensivores. By contrast, basal algae showed negative relationships with all variables tested except for detritivores. Multivariate multiple regression analyses (DISTLM) point to crustose as well as canopy layers as the best link between seaweeds and invertebrate assemblage structure. A close relationship was found between taxonomic and functional diversities. In general, low levels of taxonomic redundancy were detected for functional groups correlated with vegetation structure. A conceptual model based on the results is proposed, describing distinct stages of invertebrate assemblages in relation to the vertical structure of vegetation.

First quantification of subtidal community structure at Tristan da Cunha Islands in the remote South Atlantic: from kelp forests to the deep sea

PubMed Central

Hamilton, Scott L.; Davis, Kathryn; Thompson, Christopher D. H.; Turchik, Alan; Jenkinson, Ryan; Simpson, Doug; Sala, Enric

2018-01-01

Tristan da Cunha Islands, an archipelago of four rocky volcanic islands situated in the South Atlantic Ocean and part of the United Kingdom Overseas Territories (UKOTs), present a rare example of a relatively unimpacted temperate marine ecosystem. We conducted the first quantitative surveys of nearshore kelp forests, offshore pelagic waters and deep sea habitats. Kelp forests had very low biodiversity and species richness, but high biomass and abundance of those species present. Spatial variation in assemblage structure for both nearshore fish and invertebrates/algae was greatest between the three northern islands and the southern island of Gough, where sea temperatures were on average 3-4o colder. Despite a lobster fishery that provides the bulk of the income to the Tristan islands, lobster abundance and biomass are comparable to or greater than many Marine Protected Areas in other parts of the world. Pelagic camera surveys documented a rich biodiversity offshore, including large numbers of juvenile blue sharks, Prionace glauca. Species richness and abundance in the deep sea is positively related to hard rocky substrate and biogenic habitats such as sea pens, crinoids, whip corals, and gorgonians were present at 40% of the deep camera deployments. We observed distinct differences in the deep fish community above and below ~750 m depth. Concurrent oceanographic sampling showed a discontinuity in temperature and salinity at this depth. While currently healthy, Tristan’s marine ecosystem is not without potential threats: shipping traffic leading to wrecks and species introductions, pressure to increase fishing effort beyond sustainable levels and the impacts of climate change all could potentially increase in the coming years. The United Kingdom has committed to protection of marine environments across the UKOTs, including Tristan da Cunha and these results can be used to inform future management decisions as well as provide a baseline against which future monitoring can be based. PMID:29596484

First quantification of subtidal community structure at Tristan da Cunha Islands in the remote South Atlantic: from kelp forests to the deep sea.

PubMed

Caselle, Jennifer E; Hamilton, Scott L; Davis, Kathryn; Thompson, Christopher D H; Turchik, Alan; Jenkinson, Ryan; Simpson, Doug; Sala, Enric

2018-01-01

Tristan da Cunha Islands, an archipelago of four rocky volcanic islands situated in the South Atlantic Ocean and part of the United Kingdom Overseas Territories (UKOTs), present a rare example of a relatively unimpacted temperate marine ecosystem. We conducted the first quantitative surveys of nearshore kelp forests, offshore pelagic waters and deep sea habitats. Kelp forests had very low biodiversity and species richness, but high biomass and abundance of those species present. Spatial variation in assemblage structure for both nearshore fish and invertebrates/algae was greatest between the three northern islands and the southern island of Gough, where sea temperatures were on average 3-4o colder. Despite a lobster fishery that provides the bulk of the income to the Tristan islands, lobster abundance and biomass are comparable to or greater than many Marine Protected Areas in other parts of the world. Pelagic camera surveys documented a rich biodiversity offshore, including large numbers of juvenile blue sharks, Prionace glauca. Species richness and abundance in the deep sea is positively related to hard rocky substrate and biogenic habitats such as sea pens, crinoids, whip corals, and gorgonians were present at 40% of the deep camera deployments. We observed distinct differences in the deep fish community above and below ~750 m depth. Concurrent oceanographic sampling showed a discontinuity in temperature and salinity at this depth. While currently healthy, Tristan's marine ecosystem is not without potential threats: shipping traffic leading to wrecks and species introductions, pressure to increase fishing effort beyond sustainable levels and the impacts of climate change all could potentially increase in the coming years. The United Kingdom has committed to protection of marine environments across the UKOTs, including Tristan da Cunha and these results can be used to inform future management decisions as well as provide a baseline against which future monitoring can be based.

Can biotic indicators distinguish between natural and anthropogenic environmental stress in estuaries?

NASA Astrophysics Data System (ADS)

Tweedley, J. R.; Warwick, R. M.; Potter, I. C.

2015-08-01

Because estuaries are naturally stressed, due to variations in salinity, organic loadings, sediment stability and oxygen concentrations over both spatial and temporal scales, it is difficult both to set baseline reference conditions and to distinguish between natural and anthropogenic environmental stresses. This contrasts with the situation in marine coastal and offshore locations. A very large benthic macroinvertebrate dataset and matching concentrations for seven toxic heavy metals (i.e. Cr, Ni, Cu, Zn, Cd, Hg and Pb), compiled over three years as part of the UK's National Marine Monitoring Programme (NMMP) for 27 subtidal sites in 16 estuaries and 34 coastal marine sites in the United Kingdom, have been analysed. The results demonstrate that species composition and most benthic biotic indicators (number of taxa, overall density, Shannon-Wiener diversity, Simpson's index and AZTI's Marine Biotic Index [AMBI]) for sites in estuarine and coastal areas were significantly different, reflecting natural differences between these two environments. Shannon-Wiener diversity and AMBI were not significantly correlated either with overall heavy metal contaminant loadings or with individual heavy metal concentrations ('normalized' as heavy metal/aluminium ratios) in estuaries. In contrast, average taxonomic distinctness (Δ+) and variation in taxonomic distinctness (Λ+) did not differ significantly between estuarine and coastal environments, i.e. they were unaffected by natural differences between these two environments, but both were significantly correlated with overall heavy metal concentrations. Furthermore, Δ+ was correlated significantly with the Cu, Zn, Cd, Hg and Pb concentrations and Λ+ was correlated significantly with the Cr, Ni, Cu, Cd and Hg concentrations. Thus, one or both of these two taxonomic distinctness indices are significantly correlated with the concentrations for each of these seven heavy metals. These taxonomic distinctness indices are therefore considered appropriate indicators of anthropogenic disturbance in estuaries, as they allow a regional reference condition to be set from which significant departures can then be determined.

Seasonal variations in the characteristics of superficial sediments in a macrotidal estuary (the Seine inlet, France)

NASA Astrophysics Data System (ADS)

Lesourd, S.; Lesueur, P.; Brun-Cottan, J. C.; Garnaud, S.; Poupinet, N.

2003-09-01

Seasonal variations in the sedimentary regime in the mouth of the Seine river, a macrotidal estuary, are described for a 3-year period. The aim of this study is to characterize and to understand the main governing mechanisms, using data from more than a thousand of superficial sediment grab samples or box cores gathered throughout the study period. Analyses of lithofacies and rheological properties were carried out. The distribution of sediments is governed by seasonal meteorological variations. The surface covered by mud reaches a maximum (40% of the total mouth area) during winter. After the winter, the soft mud deposits are progressively redistributed throughout the whole estuary area and onto the shelf. During the lowest freshwater flow at the end of summer, the fine-grained sediments cover less than 20% of the river mouth area. These seasonal variations mainly depend on the river discharge intensity, but are also linked to wave activity. In the study area, the amount of fine-grained deposits after high river flow periods depends on (1) volume of mud erodable within the estuary, (2) the duration of the flood tidal influx, and (3) the duration preceding the particular annual high river flow. During the last decades, filling of the estuary upstream from Honfleur has led to a downstream shift of the fine-grained sediment deposition area; following this, the present-day mud deposition area is in the open part of the estuary, in the subtidal shallow area. Subsequently, fresh mud deposits undergo intense hydrodynamical and meteorological effects, and are partly reworked by waves and tidal currents effects. In this study, it is shown that the behaviour of suspended matter and of superficial sediments is strongly influenced by short but intense events including high river flows and gales.

Cambrian Series 3 carbonate platform of Korea dominated by microbial-sponge reefs

NASA Astrophysics Data System (ADS)

Hong, Jongsun; Lee, Jeong-Hyun; Choh, Suk-Joo; Lee, Dong-Jin

2016-07-01

Metazoans have been considered as negligible components of Cambrian Series 3 and Furongian microbial-dominated reefs, in contrast to their presence in earlier Terreneuvian-Cambrian Series 2 microbial-archaeocyath reefs. However, recent discoveries of sponges in Cambrian Series 3-Furongian reefs of Australia, China, Iran, USA, and Korea have raised question regarding their contribution in terms of carbonate platform development, which have never been assessed. This study examines Cambrian Series 3 deposits of the Daegi Formation, Korea to elucidate this question. The 100-m-thick middle part of the Daegi Formation is dominated by boundstone facies, which occupies 45% of the study interval, as well as bioclastic wackestone to packstone, bioclastic grainstone, and ooid packstone to grainstone facies. The Daegi reefs are primarily thrombolitic in composition, with 90% (n = 26/29) of the reefs containing an average of 9% sponges in aerial percentage calculated from thin sections. Lithistid sponges composed of peloidal fabrics, some desma spicules, and spicule networks commonly occupy the interstitial space in microbial clusters, are encrusted by mesoclots and Epiphyton, and are surrounded by micrite. Subordinate non-lithistid demosponges occur within clusters of microbial elements. The middle Daegi Formation can be largely subdivided into shoal environment dominated by grainstone to packstone facies and shallow subtidal platform interior environment located behind shoal with wackestone to packstone facies. The microbial-sponge reefs mainly developed around platform interior as patch reefs. The current study indicates that metazoans in the form of lithistid and non-lithistid demosponges are nearly ubiquitously incorporated in Daegi reefs and contributed greatly to the formation of microbial-sponge reefs as well as carbonate platform during the time. Study of these microbial-sponge reefs and their distribution within the carbonate platform may help us to understand how carbonate sedimentary environments responded to the extinction of archaeocyaths.

Early Cretaceous Shallow-Water Platform Carbonates of the Bolkar Mountains, Central Taurides - South Turkey: Facies Analysis and Depositional Environments

NASA Astrophysics Data System (ADS)

Solak, Cemile; Taslı, Kemal; Koç, Hayati

2016-10-01

The study area comprises southern non-metamorphic part of the Bolkar Mountains which are situated in southern Turkey, eastern part of the Central Taurides. The studied five outcrops form geologically parts of the tectonostratigraphic units called as allochthonous Aladag Unit and autochthonous Geyikdagi Unit. The aim of this study is to describe microfacies and depositional environments of the Bolkar Mountains Early Cretaceous shallow- water platform carbonates. The Lower Cretaceous is represented by continuous thick- bedded to massive dolomite sequence ranging from 100 to 150 meters thick, which only contains locally laminated limestone intercalations in the Yüğlük section and thick to very thick-bedded uniform limestones ranging from approximately 50 to 120 meters, consist of mainly laminated- fenestral mudstone, peloidal-intraclastic grainstone-packstone, bioclastic packstone- wackestone, benthic foraminiferal-intraclastic grainstone-packstone, ostracod-fenestral wackestone-mudstone, dasycladacean algal packstone-wackestone and ooidal grainstone microfacies. Based on a combination sedimantological data, facies/microfacies and micropaleontological (predominantly dasycladacean algae and diverse benthic foraminifera) analysis, it is concluded that Early Cretaceous platform carbonates of the Bolkar Mountains reflect a tidally affected tidal-flat and restricted lagoon settings. During the Berriasian- Valanginian unfavourable facies for benthic foraminifera and dolomitization were predominate. In the Hauterivian-early Aptian, the effect of dolomitization largely disappeared and inner platform conditions still prevailed showing alternations of peritidal and lagoon facies, going from peritidal plains (representing various sub-environments including supratidal, intertidal area, tidal-intertidal ponds and ooid bars) dominated by ostracod and miliolids, to dasycladacean algae-rich restricted lagoons-subtidal. These environments show a transition in the vertical and lateral directions in all studied stratigraphic sections.

Crims Island-Restoration and monitoring of juvenile salmon rearing habitat in the Columbia River Estuary, Oregon, 2004-10

USGS Publications Warehouse

Haskell, Craig A.; Tiffan, Kenneth F.

2011-01-01

Under the 2004 Biological Opinion for operation of the Federal Columbia River Power System released by the National Marine Fisheries Service, the U.S. Army Corps of Engineers (USACE), the Bonneville Power Administration (BPA), and the Bureau of Reclamation (Reclamation) were directed to restore more than 4,047 hectares (10,000 acres) of tidal marsh in the Columbia River estuary by 2010. Restoration of Crims Island near Longview, Washington, restored 38.1 hectares of marsh and swamp in the tidal freshwater portion of the lower Columbia River. The goal of the restoration was to improve habitat for juveniles of Endangered Species Act (ESA)-listed salmon stocks and ESA-listed Columbian white-tailed deer. The U.S. Geological Survey (USGS) monitored and evaluated the fisheries and aquatic resources at Crims Island in 2004 prior to restoration (pre-restoration), which began in August 2004, and then post-restoration from 2006 to 2009. This report summarizes pre- and post-restoration monitoring data used by the USGS to evaluate project success. We evaluated project success by examining the interaction between juvenile salmon and a suite of broader ecological measures including sediments, plants, and invertebrates and their response to large-scale habitat alteration. The restoration action at Crims Island from August 2004 to September 2005 was to excavate a 0.6-meter layer of soil and dig channels in the interior of the island to remove reed canary grass and increase habitat area and tidal exchange. The excavation created 34.4 hectares of tidal emergent marsh where none previously existed and 3.7 hectares of intertidal and subtidal channels. Cattle that had grazed the island for more than 50 years were relocated. Soil excavated from the site was deposited in upland areas next to the tidal marsh to establish an upland forest. Excavation deepened and widened an existing T-shaped channel to increase tidal flow to the interior of the island. The western arm of the existing 'T-channel' was extended westward and connected to Bradbury Slough to create a second outlet to the main river. New intertidal channels were constructed from the existing 'T-channel' and tidal mudflats became inundated at high tide to increase rearing habitat for juvenile salmonids. The restoration action resulted in a 95-percent increase in available juvenile salmon rearing habitat. We collected juvenile salmon and other fishes at Crims Island and a nearby reference site using beach seines and fyke nets annually from March through August during all years. Benthic invertebrates were collected with sediment corers and drift invertebrates were collected with neuston nets. Juvenile salmon stomach contents were sampled using lavage. Vegetation and sediments characteristics were surveyed and we conducted a topographic/bathymetric survey using a RTK (real time kinematic) GPS (global positioning system). The fish assemblage at Crims Island, composed primarily of threespine stickleback (Gasterosteus aculeatus), non-native banded killifish (Fundulus diaphanus), peamouth chub (Mylocheilus caurinus), subyearling Chinook salmon (Oncorhynchus tshawytscha) (hereinafter referred to as subyearlings), and small numbers of juvenile chum salmon (Oncorhynchus keta), did not differ appreciably pre- and post-restoration. Subyearlings were the primary salmonid collected and were seasonally abundant from April through May during all years. The abundance of juvenile salmon declined seasonally as water temperature exceeded 20 degrees C in the Reference site by mid-June; however, subyearlings persisted at the Mainstem site and in subtidal channels of the Restoration site through the summer in water temperatures exceeding 22 degrees C. Residence times of subyearlings in Crims Island backwaters generally were short consisting of one or two tidal cycles. Median residence time was longer in the Restoration site than in the Reference site pre- and post-restoration. Small (mean = 55.7 millimeters) subyea

Temperate and tropical brown macroalgae thrive, despite decalcification, along natural CO2 gradients.

PubMed

Johnson, Vivienne R; Russell, Bayden D; Fabricius, Katharina E; Brownlee, Colin; Hall-Spencer, Jason M

2012-09-01

Predicting the impacts of ocean acidification on coastal ecosystems requires an understanding of the effects on macroalgae and their grazers, as these underpin the ecology of rocky shores. Whilst calcified coralline algae (Rhodophyta) appear to be especially vulnerable to ocean acidification, there is a lack of information concerning calcified brown algae (Phaeophyta), which are not obligate calcifiers but are still important producers of calcium carbonate and organic matter in shallow coastal waters. Here, we compare ecological shifts in subtidal rocky shore systems along CO2 gradients created by volcanic seeps in the Mediterranean and Papua New Guinea, focussing on abundant macroalgae and grazing sea urchins. In both the temperate and tropical systems the abundances of grazing sea urchins declined dramatically along CO2 gradients. Temperate and tropical species of the calcifying macroalgal genus Padina (Dictyoaceae, Phaeophyta) showed reductions in CaCO3 content with CO2 enrichment. In contrast to other studies of calcified macroalgae, however, we observed an increase in the abundance of Padina spp. in acidified conditions. Reduced sea urchin grazing pressure and significant increases in photosynthetic rates may explain the unexpected success of decalcified Padina spp. at elevated levels of CO2 . This is the first study to provide a comparison of ecological changes along CO2 gradients between temperate and tropical rocky shores. The similarities we found in the responses of Padina spp. and sea urchin abundance at several vent systems increases confidence in predictions of the ecological impacts of ocean acidification over a large geographical range. © 2012 Blackwell Publishing Ltd.

Circulation exchange patterns in Sinclair Inlet, Washington

USGS Publications Warehouse

Noble, Marlene A.; Rosenberger, Kurt J.; Paulson, Anthony J.; Gartner, Anne L.

2013-01-01

In 1994, the U.S. Geological Survey (USGS), in cooperation with the U.S. Navy, deployed three sets of moorings in Sinclair Inlet, which is a relatively small embayment on the western side of Puget Sound (fig. 1). This inlet is home to the Puget Sound Naval Shipyard. One purpose of the measurement program was to determine the transport pathways and fate of contaminants known to be present in Sinclair Inlet. Extensive descriptions of the program and the resultant information about contaminant pathways have been reported in Gartner and others (1998). This report primarily focused on the bottom boundary layer and the potential for resuspension and transport of sediments on the seabed in Sinclair Inlet as a result of tides and waves. Recently (2013), interest in transport pathways for suspended and dissolved materials in Sinclair Inlet has been rekindled. In particular, the USGS scientists in Washington and California have been asked to reexamine the datasets collected in the earlier study to refine not only our understanding of transport pathways through the inlet, but to determine how those transport pathways are affected by subtidal currents, local wind stress, and fresh water inputs. Because the prior study focused on the bottom boundary layer and not the water column, a reanalysis of the datasets could increase our understanding of the dynamic forces that drive transport within and through the inlet. However, the early datasets are limited in scope and a comprehensive understanding of these transport processes may require more extensive datasets or the development of a detailed numerical model of transport processes for the inlet, or both.

Phase-Shift Dynamics of Sea Urchin Overgrazing on Nutrified Reefs

PubMed Central

Kriegisch, Nina; Reeves, Simon; Johnson, Craig R.; Ling, Scott D.

2016-01-01

Shifts from productive kelp beds to impoverished sea urchin barrens occur globally and represent a wholesale change to the ecology of sub-tidal temperate reefs. Although the theory of shifts between alternative stable states is well advanced, there are few field studies detailing the dynamics of these kinds of transitions. In this study, sea urchin herbivory (a ‘top-down’ driver of ecosystems) was manipulated over 12 months to estimate (1) the sea urchin density at which kelp beds collapse to sea urchin barrens, and (2) the minimum sea urchin density required to maintain urchin barrens on experimental reefs in the urbanised Port Phillip Bay, Australia. In parallel, the role of one of the ‘bottom-up’ drivers of ecosystem structure was examined by (3) manipulating local nutrient levels and thus attempting to alter primary production on the experimental reefs. It was found that densities of 8 or more urchins m-2 (≥ 427 g m-2 biomass) lead to complete overgrazing of kelp beds while kelp bed recovery occurred when densities were reduced to ≤ 4 urchins m-2 (≤ 213 g m-2 biomass). This experiment provided further insight into the dynamics of transition between urchin barrens and kelp beds by exploring possible tipping-points which in this system can be found between 4 and 8 urchins m-2 (213 and 427 g m-2 respectively). Local enhancement of nutrient loading did not change the urchin density required for overgrazing or kelp bed recovery, as algal growth was not affected by nutrient enhancement. PMID:28030596

Indicator microbes correlate with pathogenic bacteria, yeasts and helminthes in sand at a subtropical recreational beach site.

PubMed

Shah, A H; Abdelzaher, A M; Phillips, M; Hernandez, R; Solo-Gabriele, H M; Kish, J; Scorzetti, G; Fell, J W; Diaz, M R; Scott, T M; Lukasik, J; Harwood, V J; McQuaig, S; Sinigalliano, C D; Gidley, M L; Wanless, D; Ager, A; Lui, J; Stewart, J R; Plano, L R W; Fleming, L E

2011-06-01

Research into the relationship between pathogens, faecal indicator microbes and environmental factors in beach sand has been limited, yet vital to the understanding of the microbial relationship between sand and the water column and to the improvement of criteria for better human health protection at beaches. The objectives of this study were to evaluate the presence and distribution of pathogens in various zones of beach sand (subtidal, intertidal and supratidal) and to assess their relationship with environmental parameters and indicator microbes at a non-point source subtropical marine beach. In this exploratory study in subtropical Miami (Florida, USA), beach sand samples were collected and analysed over the course of 6 days for several pathogens, microbial source tracking markers and indicator microbes. An inverse correlation between moisture content and most indicator microbes was found. Significant associations were identified between some indicator microbes and pathogens (such as nematode larvae and yeasts in the genus Candida), which are from classes of microbes that are rarely evaluated in the context of recreational beach use. Results indicate that indicator microbes may predict the presence of some of the pathogens, in particular helminthes, yeasts and the bacterial pathogen Staphylococcus aureus including methicillin-resistant forms. Indicator microbes may thus be useful for monitoring beach sand and water quality at non-point source beaches. The presence of both indicator microbes and pathogens in beach sand provides one possible explanation for human health effects reported at non-point sources beaches. © 2011 The Authors. Journal of Applied Microbiology © 2011 The Society for Applied Microbiology.

Nearshore Satellite Data as Relative Indicators of Intertidal Organism Physiological Stress

NASA Astrophysics Data System (ADS)

Matzelle, A.; Helmuth, B.; Lakshmi, V.

2011-12-01

The physiological performance of intertidal and shallow subtidal invertebrates and algae is significantly affected by water temperature, and so the ability to measure and model onshore water temperatures is critical for ecological and biogeographic studies. Because of the localized influences of processes such as upwelling, mixing, and surface heating from solar radiation, nearshore water temperatures can differ from those measured directly offshore by buoys and satellites. It remains an open question what the magnitude of the differences in these temperatures are, and whether "large pixel" measurements can serve as an effective proxy for onshore processes, particularly when extrapolating from laboratory physiological studies to field conditions. We compared 9 years of nearshore (~10km) MODIS (Terra and Aqua overpasses) SST data against in situ measurements of water temperature conducted at two intertidal sites in central Oregon- Boiler Bay and Strawberry Hill. We collapsed data into increasingly longer temporal averages to address the correlation and absolute differences between onshore and nearshore temperatures over daily, weekly and monthly timescales. Results indicate that nearshore SST is a reasonable proxy for onshore water temperature, and that the strength of the correlation increases with decreasing temporal resolution. Correlations between differences in maxima are highest, followed by average and minima, and were lower at a site with regular upwelling. While average differences ranged from ~0.199-1.353°C, absolute differences across time scales were ~0.446-6.906°C, and were highest for cold temperatures. The results suggest that, at least at these two sites, SST can be used as a relative proxy for general trends only, especially over longer time scales.

Tracing submarine groundwater discharge flux in Tolo Harbor, Hong Kong (China)

NASA Astrophysics Data System (ADS)

Liu, Yi; Jiao, Jiu Jimmy; Cheng, Ho Kwan

2018-02-01

Submarine groundwater discharge (SGD) is an important pathway for groundwater and associated chemicals to discharge to the sea. Groundwater levels monitored along a transect perpendicular to the shoreline are used to calculate SGD flux from the nearshore aquifer to Tolo Harbor, Hong Kong (China). The calculated SGD flux—recharge/discharge measured with Darcy's Law methods—agrees well with estimates based on geo-tracer techniques and seepage meter in Tolo Harbor during previous studies. The estimated freshwater SGD is 1.69-2.0 m2/d at the study site and 0.3 ± 0.04 cm/d for the whole of Tolo Harbor, which is comparable to the river discharge (0.25 ± 0.07 cm/d) and precipitation (0.45 ± 0.15 cm/d). The tide-driven SGD in the intertidal zone is 13.98-17.59 m2/d at the study site and 2.42 ± 0.56 cm/d for the whole of Tolo Harbor. The SGD occurring in the subtidal zone and the bottom of Tolo Harbor is 3.12 ± 4.63 cm/d. Fresh SGD accounts for 5% of the total SGD, while the rest ( 95%) is contributed by saline SGD driven by various forces. About 96% of the tide-driven SGD in the intertidal zone occurs in the ebbing tide period because the head difference between the groundwater level and sea level is great during this period. Tide-driven SGD in the spring tide is 1.2 times that during neap tide. The tidal fluctuation amplitude and tide-driven SGD in the intertidal zone are positively correlated to each other; thus, a spring neap variation of the tide-driven SGD is observed.

Establishing Functional Relationships between Abiotic Environment, Macrophyte Coverage, Resource Gradients and the Distribution of Mytilus trossulus in a Brackish Non-Tidal Environment.

PubMed

Kotta, Jonne; Oganjan, Katarina; Lauringson, Velda; Pärnoja, Merli; Kaasik, Ants; Rohtla, Liisa; Kotta, Ilmar; Orav-Kotta, Helen

2015-01-01

Benthic suspension feeding mussels are an important functional guild in coastal and estuarine ecosystems. To date we lack information on how various environmental gradients and biotic interactions separately and interactively shape the distribution patterns of mussels in non-tidal environments. Opposing to tidal environments, mussels inhabit solely subtidal zone in non-tidal waterbodies and, thereby, driving factors for mussel populations are expected to differ from the tidal areas. In the present study, we used the boosted regression tree modelling (BRT), an ensemble method for statistical techniques and machine learning, in order to explain the distribution and biomass of the suspension feeding mussel Mytilus trossulus in the non-tidal Baltic Sea. BRT models suggested that (1) distribution patterns of M. trossulus are largely driven by separate effects of direct environmental gradients and partly by interactive effects of resource gradients with direct environmental gradients. (2) Within its suitable habitat range, however, resource gradients had an important role in shaping the biomass distribution of M. trossulus. (3) Contrary to tidal areas, mussels were not competitively superior over macrophytes with patterns indicating either facilitative interactions between mussels and macrophytes or co-variance due to common stressor. To conclude, direct environmental gradients seem to define the distribution pattern of M. trossulus, and within the favourable distribution range, resource gradients in interaction with direct environmental gradients are expected to set the biomass level of mussels.

Modelling the distribution of hard seabed using calibrated multibeam acoustic backscatter data in a tropical, macrotidal embayment: Darwin Harbour, Australia

NASA Astrophysics Data System (ADS)

Siwabessy, P. Justy W.; Tran, Maggie; Picard, Kim; Brooke, Brendan P.; Huang, Zhi; Smit, Neil; Williams, David K.; Nicholas, William A.; Nichol, Scott L.; Atkinson, Ian

2018-06-01

Spatial information on the distribution of seabed substrate types in high use coastal areas is essential to support their effective management and environmental monitoring. For Darwin Harbour, a rapidly developing port in northern Australia, the distribution of hard substrate is poorly documented but known to influence the location and composition of important benthic biological communities (corals, sponges). In this study, we use angular backscatter response curves to model the distribution of hard seabed in the subtidal areas of Darwin Harbour. The angular backscatter response curve data were extracted from multibeam sonar data and analysed against backscatter intensity for sites observed from seabed video to be representative of "hard" seabed. Data from these sites were consolidated into an "average curve", which became a reference curve that was in turn compared to all other angular backscatter response curves using the Kolmogorov-Smirnov goodness-of-fit. The output was used to generate interpolated spatial predictions of the probability of hard seabed ( p-hard) and derived hard seabed parameters for the mapped area of Darwin Harbour. The results agree well with the ground truth data with an overall classification accuracy of 75% and an area under curve measure of 0.79, and with modelled bed shear stress for the Harbour. Limitations of this technique are discussed with attention to discrepancies between the video and acoustic results, such as in areas where sediment forms a veneer over hard substrate.

Effects of seawater acidification on a coral reef meiofauna community

NASA Astrophysics Data System (ADS)

Sarmento, V. C.; Souza, T. P.; Esteves, A. M.; Santos, P. J. P.

2015-09-01

Despite the increasing risk that ocean acidification will modify benthic communities, great uncertainty remains about how this impact will affect the lower trophic levels, such as members of the meiofauna. A mesocosm experiment was conducted to investigate the effects of water acidification on a phytal meiofauna community from a coral reef. Community samples collected from the coral reef subtidal zone (Recife de Fora Municipal Marine Park, Porto Seguro, Bahia, Brazil), using artificial substrate units, were exposed to a control pH (ambient seawater) and to three levels of seawater acidification (pH reductions of 0.3, 0.6, and 0.9 units below ambient) and collected after 15 and 30 d. After 30 d of exposure, major changes in the structure of the meiofauna community were observed in response to reduced pH. The major meiofauna groups showed divergent responses to acidification. Harpacticoida and Polychaeta densities did not show significant differences due to pH. Nematoda, Ostracoda, Turbellaria, and Tardigrada exhibited their highest densities in low-pH treatments (especially at the pH reduction of 0.6 units, pH 7.5), while harpacticoid nauplii were strongly negatively affected by low pH. This community-based mesocosm study supports previous suggestions that ocean acidification induces important changes in the structure of marine benthic communities. Considering the importance of meiofauna in the food web of coral reef ecosystems, the results presented here demonstrate that the trophic functioning of coral reefs is seriously threatened by ocean acidification.

Effects of seawater acidification on the early development of sea urchin Glyptocidaris crenularis

NASA Astrophysics Data System (ADS)

Zhan, Yaoyao; Hu, Wanbin; Duan, Lizhu; Liu, Minbo; Zhang, Weijie; Chang, Yaqing; Li, Cong

2017-10-01

In this study, we evaluated the effects of CO2-induced seawater acidification on fertilization, embryogenesis and early larval development in the sea urchin Glyptocidaris crenularis, that inhabits subtidal coastal areas in northern China. The range in seawater pH used in experiments was based on the projections of the Intergovernmental Panel on Climate Change (IPCC), to the year 2100. A natural seawater treatment (pHnbs=7.98±0.03) and three laboratory-controlled acidified treatments (OA1, ΔpHnbs=-0.3 units; OA2, ΔpHnbs=-0.4 units; OA3, ΔpHnbs=-0.5 units) were used in experiments. Results show that: (1) there was a negative effect of seawater acidification on fertilization and on the percentage of abnormal fertilized eggs; (2) the size of early cleavage stage embryos decreased in a dose-dependent manner with decreasing pH; (3) both the hatching rate of blastulae and the survival rate of four-armed pluteus larvae decreased as pH declined; (4) larval abnormalities including asymmetrical development, changes in the length of skeletal elements, and corroded spicules were observed in all seawater acidified-treatments compared with the control. These data indicate that seawater acidification has a negative impact on the early development of G. crenularis, and supports the hypothesis that the response of echinoderms to ocean acidification (OA) varies among species. Further research is required to clarify the specific cellular mechanisms involved.

Macrobenthic patterns at the shallow marine waters in the caldera of the active volcano of Deception Island, Antarctica

NASA Astrophysics Data System (ADS)

Angulo-Preckler, Carlos; Figuerola, Blanca; Núñez-Pons, Laura; Moles, Juan; Martín-Martín, Rafael; Rull-Lluch, Jordi; Gómez-Garreta, Amelia; Avila, Conxita

2018-04-01

Deception Island is an active volcano located at the southern end of the South Shetland Archipelago, in the Antarctic Ocean. After the last eruption in 1970, benthic recolonization took place within the bay, with echinoderms being the dominant epifauna (e.g., the ophiuroid Ophionotus victoriae, the echinoid Sterechinus neumayeri and the sea star Odontaster validus), together with dense infaunal communities (mostly composed by oligochaetes, polychaetes, and bivalves). Here, we aim to describe the actual status of the marine benthic ecosystems inhabiting the shallow subtidal areas of this volcanic island. Benthic species were qualitatively scored as presence versus absence, considering the different sampling effort between localities done over the years. A total of 139 species of macroorganisms, belonging to 16 phyla were found, including fauna and flora, increasing the species richness values previously reported in all sites surveyed within the volcano caldera. Moreover, a dramatic increase in biodiversity was found towards the entrance of the bay. We suggest, however, that recolonization from external waters may not be the only reason for this pattern. In fact, sediment flux rates and substrate instability are common disturbances within the bay, probably being among the major factors determining benthic community assemblages. These processes probably favour deposit feeding communities at the innermost locations of the bay. This study provides a remarkably increased and updated species inventory from previous reports, altogether with a description of the main communities inhabiting the bay and the abiotic factors regulating this, mainly the bottom type.

Patterns in tropical seagrass photosynthesis in relation to light, depth and habitat

NASA Astrophysics Data System (ADS)

Campbell, Stuart J.; McKenzie, Len J.; Kerville, Simon P.; Bité, Juanita S.

2007-07-01

Seagrass meadows across north-eastern Australia, survive a range of environmental conditions in coastal bays, reefs, estuarine and deepwater habitats through adaptation of a range of structural, morphological and physiological features. The aim of this study was to investigate the influence of spatial features (habitat type, site and depth) and photon flux on the photosynthetic performance of 11 tropical seagrass species. Pulse amplitude modulated (PAM) fluorometry was used to generate rapid light curves from which measures of maximal electron transport rate (ETR max), photosynthetic efficiency ( α), saturating irradiance ( Ek) and effective quantum yield (Δ F/ Fm') were derived. The amount of light absorbed by leaves (absorption factor) was also determined for each population. In intertidal habitats many seagrass species exhibited typical sun-type responses with a close coupling of both ETR max and Ek with photon flux. Photosynthetic performance ranged from minima in Thalassodendron ciliatum to maxima in Syringodium isoetifolium. The absence of a coupling between photosynthetic performance and photon flux in subtidal populations was most likely due to highly variable light climates and possible light attenuation, and hence the photo-biology of estuarine and deepwater seagrasses exhibited photosynthetic responses indicative of light limitation. In contrast seagrass species from shallow reef and coastal habitats for the most part exhibited light saturation characteristics. Of all the variables examined ETR max, Ek and Δ F/ Fm' were most responsive to changing light climates and provide reliable physiological indicators of real-time photosynthetic performance of tropical seagrasses under different light conditions.

Seasonal sediment dynamics shape temperate bedrock reef communities

USGS Publications Warehouse

Figurski, Jared D.; Freiwald, Jan; Lonhart, Steve I.; Storlazzi, Curt

2016-01-01

Mobilized seafloor sediment can impact benthic reef communities through burial, scour, and turbidity. These processes are ubiquitous in coastal oceans and, through their influence on the survival, fitness, and interactions of species, can alter the structure and function of benthic communities. In northern Monterey Bay, California, USA, as much as 30% of the seafloor is buried or exposed seasonally, making this an ideal location to test how subtidal temperate rocky reef communities vary in the presence and absence of chronic sediment-based disturbances. Designated dynamic plots were naturally inundated by sediment in summer (50 to 100% cover) and swept clean in winter, whereas designated stable plots remained free of sediment during our study. Multivariate analyses indicated significant differences in the structure of sessile and mobile communities between dynamic and stable reef habitats. For sessile species, community structure in disturbed plots was less variable in space and time than in stable plots due to the maintenance of an early successional state. In contrast, community structure of mobile species varied more in disturbed plots than in stable plots, reflecting how mobile species distribute in response to sediment dynamics. Some species were found only in these disturbed areas, suggesting that the spatial mosaic of disturbance could increase regional diversity. We discuss how the relative ability of species to tolerate disturbance at different life history stages and their ability to colonize habitat translate into community-level differences among habitats, and how this response varies between mobile and sessile communities.

Predicting fish community properties within estuaries: Influence of habitat type and other environmental features

NASA Astrophysics Data System (ADS)

França, Susana; Vasconcelos, Rita P.; Fonseca, Vanessa F.; Tanner, Susanne E.; Reis-Santos, Patrick; Costa, Maria José; Cabral, Henrique N.

2012-07-01

Statistical models predicting species distributions are essential not only to increase knowledge on species but for their application in conservation and ecologically-based management. The variation of fish species richness and abundance in the most representative habitats (saltmarsh, mudflat and subtidal) in five estuaries along the Portuguese coast was analysed through seasonal sampling surveys in 2009. Generalized additive models (GAM) were developed to describe the variation of species richness and abundances with a set of geomorphologic, hydrologic and environmental characteristics from the sampled estuaries and habitats. GAM were chosen as the complex interactions dominating these ecosystems and species distribution are non-linear. Final models built for each estuary and for all estuaries together performed well during the calibration phase and also during the validation phase, where an unused data sub-set from each estuary was used. There was not a similar combination of variables retained by the models for the studied estuaries but factors such as the area of the habitat, the distance to estuary mouth, percentage of mud in the sediment and depth were commonly retained. The partial effect of these predictor variables on the variation of species richness and abundance in the estuaries varied markedly and the importance of preserving the heterogeneity of habitats within estuaries was highlighted. Models for each individual estuary performed better than models for estuaries combined. Predictive models could be useful as a preliminary tool to prepare long-term conservation plans at different scales.

High frequency peritidal cycles in the lower member of the Late Cretaceous (Turonian, Coniasian-Santonian) El Hefhuf Formation, Bahariya Oases, Western Desert, Egypt

NASA Astrophysics Data System (ADS)

Khalifa, M. A.; Tanner, Lawrence H.

2017-06-01

Carbonate lithofacies of the lower member of the El Hefhuf Formation (Turonian, Coniasian-Santonian) in the Bahariya Oases, Western Desert of Egypt comprise dolostone, burrowed dolostone, cherty dolostone, calcareous dedolostone, dolomitic quartzose lime-mudstone, and caliche. The dolostone and cherty dolostone formed in intertidal to supratidal environments, while dedolostone and caliche were formed during subaerial exposure. The dolomitic quartzose lime-mudstone was deposited in a restricted subtidal environment. Stable isotope analyses of the dolostone lithofacies are consistent with dolomitization by normal marine to evaporatively enriched dolomitizing fluids with only slight mixing of meteoric water. Therefore, dolomitization occurred in the intertidal and supratidal environments immediately following deposition. The dolostone and cherty dolostone lithofacies display pronounced cyclicity at the sub-meter scale, with individual cycles consisting of one (monolithic), two (diad) or at most three (triad) lithofacies. Most of all cycles show evidence of subaerial exposure at the top, such as brecciations, and many cycles are capped by calcareous palaeosol layers (caliche). In the absence of evidence for cycle periods at Milankovitch-scale frequencies, we reject orbital forcing as the cause of the cyclicity and suggest instead autocyclic depositional processes in the peritidal environment as the primary control on cyclicity, possibly modified by eustatic fluctuations at periods longer than the cycles recorded here. The significance of this study is to suggest formation of dolomite cycles due to high-frequency in sea level with intermittent subaerial exposure.

Establishing Functional Relationships between Abiotic Environment, Macrophyte Coverage, Resource Gradients and the Distribution of Mytilus trossulus in a Brackish Non-Tidal Environment

PubMed Central

Kotta, Jonne; Oganjan, Katarina; Lauringson, Velda; Pärnoja, Merli; Kaasik, Ants; Rohtla, Liisa; Kotta, Ilmar; Orav-Kotta, Helen

2015-01-01

Benthic suspension feeding mussels are an important functional guild in coastal and estuarine ecosystems. To date we lack information on how various environmental gradients and biotic interactions separately and interactively shape the distribution patterns of mussels in non-tidal environments. Opposing to tidal environments, mussels inhabit solely subtidal zone in non-tidal waterbodies and, thereby, driving factors for mussel populations are expected to differ from the tidal areas. In the present study, we used the boosted regression tree modelling (BRT), an ensemble method for statistical techniques and machine learning, in order to explain the distribution and biomass of the suspension feeding mussel Mytilus trossulus in the non-tidal Baltic Sea. BRT models suggested that (1) distribution patterns of M. trossulus are largely driven by separate effects of direct environmental gradients and partly by interactive effects of resource gradients with direct environmental gradients. (2) Within its suitable habitat range, however, resource gradients had an important role in shaping the biomass distribution of M. trossulus. (3) Contrary to tidal areas, mussels were not competitively superior over macrophytes with patterns indicating either facilitative interactions between mussels and macrophytes or co-variance due to common stressor. To conclude, direct environmental gradients seem to define the distribution pattern of M. trossulus, and within the favourable distribution range, resource gradients in interaction with direct environmental gradients are expected to set the biomass level of mussels. PMID:26317668

Carbonate-evaporite sequences of the late Jurassic, southern and southwestern Arabian Gulf

DOE Office of Scientific and Technical Information (OSTI.GOV)

Alsharhan, A.S.; Whittle, G.L.

1995-11-01

The carbonate-evaporite sequences of the Upper Jurassic Arab and overlying Hith formations in the southern and southwestern Arabian Gulf form many supergiant and giant fields that produce from the Arab Formation and are excellent examples of a classic reservoir/seal relationship. The present-day sabkha depositional setting that extends along most of the southern and southwestern coasts of the Arabian Gulf provides an analog to these Upper Jurassic sedimentary rocks. In fact, sabkha-related diagenesis of original grain-supported sediments in the Arab and Hith formations has resulted in five distinct lithofacies that characterize the reservoir/seal relationship: (1) oolitic/peloidal grainstone, (2) dolomitic grainstone, (3)more » dolomitic mudstone, (4) dolomitized grainstone, and (5) massive anhydrite. Interparticle porosity in grainstones and dolomitic grainstones and intercrystalline porosity in dolomitized rocks provide the highest porosity in the study area. These sediments accumulated in four types of depositional settings: (1) supratidal sabkhas, (2) intertidal mud flats and stromatolitic flats, (3) shallow subtidal lagoons, and (4) shallow open-marine shelves. The diagenetic history of the Arab and Hith formations in the southern and southwestern Arabian Gulf suggests that the anhydrite and much of the dolomitization are a result of penecontemporaneous sabkha diagenesis. The character and timing of the paragenetic events are responsible for the excellent porosity of the Arab Formation and the lack of porosity in the massive anhydrites of the Hith, which together result in the prolific hydrocarbon sequences of these formations.« less

Sequence stratigraphy of the Lower Cenomanian Bahariya Formation, Bahariya Oasis, Western Desert, Egypt

NASA Astrophysics Data System (ADS)

Catuneanu, O.; Khalifa, M. A.; Wanas, H. A.

2006-08-01

The Lower Cenomanian Bahariya Formation corresponds to a second-order depositional sequence that formed within a continental shelf setting under relatively low-rate conditions of positive accommodation (< 200 m during 3-6 My). This overall trend of base-level rise was interrupted by three episodes of base-level fall that resulted in the formation of third-order sequence boundaries. These boundaries are represented by subaerial unconformities (replaced or not by younger transgressive wave ravinement surfaces), and subdivide the Bahariya Formation into four third-order depositional sequences. The construction of the sequence stratigraphic framework of the Bahariya Formation is based on the lateral and vertical changes between shelf, subtidal, coastal and fluvial facies, as well as on the nature of contacts that separate them. The internal (third-order) sequence boundaries are associated with incised valleys, which explain (1) significant lateral changes in the thickness of incised valley fill deposits, (2) the absence of third-order highstand and even transgressive systems tracts in particular areas, and (3) the abrupt facies shifts that may occur laterally over relatively short distances. Within each sequence, the concepts of lowstand, transgressive and highstand systems tracts are used to explain the observed lateral and vertical facies variability. This case study demonstrates the usefulness of sequence stratigraphic analysis in understanding the architecture and stacking patterns of the preserved rock record, and helps to identify 13 stages in the history of base-level changes that marked the evolution of the Bahariya Oasis region during the Early Cenomanian.

Age and growth of the knobbed whelk Busycon carica (Gmelin 1791) in South Carolina subtidal waters

USGS Publications Warehouse

Eversole, A.G.; Anderson, W.D.; Isely, J.J.

2008-01-01

Knobbed whelk, Busycon carica (Gmelin, 1791), age and growth were estimated using tagged and recaptured individuals (n = 396) from areas off South Carolina coastal islands. Recaptured whelks were at large an average of 298 d (4-2,640 d). Growth, an increase in shell length (SL), was evident in 24% of the recaptured whelks, whereas 29% of recaptured individuals were the same size as when released and 47% were smaller than the released size. Mean growth rate was <0.001 mm SL/d and 0.022 mm SL/d if decreases in SL were assumed to be zero. Smaller whelks (???90 mm SL) at large for over one year grew seven times faster than larger whelks. The von Bertalanffy growth model: SL1 = 159.5(1 - e-0.0765(t+0.4162)), was developed from the mark - recapture whelks exhibiting growth. Based on a South Carolina minimum legal size of 102 mm SL, whelks recruit into the fishery at 13 y of age. The longevity, large size at maturity and slow growth suggest the potential for over harvest of knobbed whelk. Future whelk management plans may wish to consider whether economically viable commercial harvest can be sustainable.

Relationship between Enterococcal Levels and Sediment Biofilms at Recreational Beaches in South Florida

PubMed Central

Piggot, Alan M.; Johnson, Sara; Phillips, Matthew C.; Solo-Gabriele, Helena M.

2012-01-01

Enterococci, recommended at the U.S. federal level for monitoring water quality at marine recreational beaches, have been found to reside and grow within beach sands. However, the environmental and ecological factors affecting enterococcal persistence remain poorly understood, making it difficult to determine levels of fecal pollution and assess human health risks. Here we document the presence of enterococci associated with beach sediment biofilms at eight south Florida recreational beaches. Enterococcal levels were highest in supratidal sands, where they displayed a nonlinear, unimodal relationship with extracellular polymeric secretions (EPS), the primary component of biofilms. Enterococcal levels peaked at intermediate levels of EPS, suggesting that biofilms may promote the survival of enterococci but also inhibit enterococci as the biofilm develops within beach sands. Analysis of bacterial community profiles determined by terminal restriction fragment length polymorphisms showed the bacterial communities of supratidal sediments to be significantly different from intertidal and subtidal communities; however, no differences were observed in bacterial community compositions associated with different EPS concentrations. Our results suggest that supratidal sands are a microbiologically unique environment favorable for the incorporation and persistence of enterococci within beach sediment biofilms. PMID:22706061

Sea level, paleogeography, and archeology on California's Northern Channel Islands

NASA Astrophysics Data System (ADS)

Reeder-Myers, Leslie; Erlandson, Jon M.; Muhs, Daniel R.; Rick, Torben C.

2015-03-01

Sea-level rise during the late Pleistocene and early Holocene inundated nearshore areas in many parts of the world, producing drastic changes in local ecosystems and obscuring significant portions of the archeological record. Although global forces are at play, the effects of sea-level rise are highly localized due to variability in glacial isostatic adjustment (GIA) effects. Interpretations of coastal paleoecology and archeology require reliable estimates of ancient shorelines that account for GIA effects. Here we build on previous models for California's Northern Channel Islands, producing more accurate late Pleistocene and Holocene paleogeographic reconstructions adjusted for regional GIA variability. This region has contributed significantly to our understanding of early New World coastal foragers. Sea level that was about 80-85 m lower than present at the time of the first known human occupation brought about a landscape and ecology substantially different than today. During the late Pleistocene, large tracts of coastal lowlands were exposed, while a colder, wetter climate and fluctuating marine conditions interacted with rapidly evolving littoral environments. At the close of the Pleistocene and start of the Holocene, people in coastal California faced shrinking land, intertidal, and subtidal zones, with important implications for resource availability and distribution.

2010 bathymetric survey and digital elevation model of Corte Madera Bay, California

USGS Publications Warehouse

Foxgrover, Amy C.; Finlayson, David P.; Jaffe, Bruce E.; Takekawa, John Y.; Thorne, Karen M.; Spragens, Kyle A.

2011-01-01

A high-resolution bathymetric survey of Corte Madera Bay, California, was collected in early 2010 in support of a collaborative research project initiated by the San Francisco Bay Conservation and Development Commission and funded by the U.S. Environmental Protection Agency. The primary objective of the Innovative Wetland Adaptation in the Lower Corte Madera Creek Watershed Project is to develop shoreline adaptation strategies to future sea-level rise based upon sound science. Fundamental to this research was the development of an of an up-to-date, high-resolution digital elevation model (DEM) extending from the subtidal environment through the surrounding intertidal marsh. We provide bathymetric data collected by the U.S. Geological Survey and have merged the bathymetry with a 1-m resolution aerial lidar data set that was collected by the National Oceanic and Atmospheric Administration during the same time period to create a seamless, high-resolution DEM of Corte Madera Bay and the surrounding topography. The bathymetric and DEM surfaces are provided at both 1 m and 10 m resolutions formatted as both X, Y, Z text files and ESRI Arc ASCII files, which are accompanied by Federal Geographic Data Committee compliant metadata.

Sea level, paleogeography, and archeology on California's Northern Channel Islands

USGS Publications Warehouse

Reeder-Myers, Leslie; Erlandson, Jon M.; Muhs, Daniel R.; Rick, Torben C.

2015-01-01

Sea-level rise during the late Pleistocene and early Holocene inundated nearshore areas in many parts of the world, producing drastic changes in local ecosystems and obscuring significant portions of the archeological record. Although global forces are at play, the effects of sea-level rise are highly localized due to variability in glacial isostatic adjustment (GIA) effects. Interpretations of coastal paleoecology and archeology require reliable estimates of ancient shorelines that account for GIA effects. Here we build on previous models for California's Northern Channel Islands, producing more accurate late Pleistocene and Holocene paleogeographic reconstructions adjusted for regional GIA variability. This region has contributed significantly to our understanding of early New World coastal foragers. Sea level that was about 80–85 m lower than present at the time of the first known human occupation brought about a landscape and ecology substantially different than today. During the late Pleistocene, large tracts of coastal lowlands were exposed, while a colder, wetter climate and fluctuating marine conditions interacted with rapidly evolving littoral environments. At the close of the Pleistocene and start of the Holocene, people in coastal California faced shrinking land, intertidal, and subtidal zones, with important implications for resource availability and distribution.

Stipe Length as an Indicator of Reproductive Maturity in the Kelp Ecklonia cava

NASA Astrophysics Data System (ADS)

Kim, Sangil; Youn, Suk Hyun; Oh, Hyun-Ju; Choi, Sun Kyeong; Kang, Yun Hee; Kim, Tae-Hoon; Lee, Hyuk Je; Choi, Kwang-Sik; Park, Sang Rul

2018-05-01

We conducted testing to determine whether stipe length is a useful indicator of reproductive maturity in the kelp Ecklonia cava, a species that plays a pivotal role in ecosystem functioning and services in subtidal areas. Approximately 100 sporophytes with stipes of various lengths were collected during the fertile period (July-November, 2013). We investigated the relationships between stipe length and other morphological characteristics to determine whether stipe length could indicate the age of reproductive maturity. Primary blade length, longest blade length, thallus height, and total length showed significant relationships with stipe length. The length of the primary and longest blades gradually declined as stipe length increased above 125 mm. Zoosporangial sori were found on the blades of more than 70% of individuals with stipes longer than 125 mm, but on only 8% of individuals with stipes less than 125 mm long. Stipe length therefore seems to be an acceptable proxy for reproductive maturity. Another factor to consider, however, is that all specimens with zoosporangial sori, regardless of stipe length, had a dry weight of 80 g or more; thus, individual biomass may also be an important parameter influencing the initiation of reproduction.

Shallow stratification prevailed for ∼1700 to ∼1300 Ma ocean: Evidence from organic carbon isotopes in the North China Craton

NASA Astrophysics Data System (ADS)

Luo, Genming; Junium, Christopher K.; Kump, Lee R.; Huang, Junhua; Li, Chao; Feng, Qinglai; Shi, Xiaoying; Bai, Xiao; Xie, Shucheng

2014-08-01

The Late Paleoproterozoic to Early Mesoproterozoic (from ∼1700 Ma to ∼1300 Ma) was highlighted by the assembly of the Nuna supercontinent, expansion of euxinic marine environments and apparent stasis in the diversity of eukaryotes. The isotopic composition of carbonate carbon (δ13Ccarb) was surprisingly constant during this interval, but little is known about the secular variation in the organic carbon isotopic composition (δ13Corg). Here we report δ13Corg data from the latest Paleoproterozoic (>1650 Ma) to Early Mesoproterozoic (∼1300 Ma) succession in North China. The δ13Corg values range from -25‰ to -34‰, and are dependent on sedimentary facies. In subtidal and deeper environments δ13Corg values are low and constant, ca. -32‰, but relatively enriched and more variable in shallower intertidal and supratidal environments. We attribute the facies-dependent variation in δ13Corg to the presence of a shallow chemocline. A probable result of a shallow chemocline is that it supported significant contributions of organic matter produced by chemoautotrophic and/or anaerobic photoautotrophic microbes in relatively deep environments from the latest Paleoproterozoic to Early Mesoproterozoic continental shelf of North China.

Secular change in chert distribution: a reflection of evolving biological participation in the silica cycle

NASA Technical Reports Server (NTRS)

Maliva, R. G.; Knoll, A. H.; Siever, R.

1989-01-01

In the modern oceans, the removal of dissolved silica from sea water is principally a biological process carried out by diatoms, with lesser contributions from radiolaria, silicoflagellates, and sponges. Because such silica in sediments is often redistributed locally during diagenesis to from nodular or bedded chert, stratigraphic changes in the facies distribution of early diagenetic chert provide important insights into the development of biological participation in the silica cycle. The abundance of chert in upper Proterozoic peritidal carbonates suggests that at this time silica was removed from seawater principally by abiological processes operating in part of the margins of the oceans. With the evolution of demosponges near the beginning of the Cambrian Period, subtidal biogenetic cherts became increasingly common, and with the Ordovician rise of radiolaria to ecological and biogeochemical prominence, sedimented skeletons became a principal sink for oceanic silica. Cherts of Silurian to Cretaceous age share many features of facies distribution and petrography but they differ from Cenozoic siliceous deposits. These differences are interpreted to reflect the mid-Cretaceous radiation of diatoms and their subsequent rise to domination of the silica cycle. Biogeochemical cycles provide an important framework for the paleobiological interpretation of the organisms that participate in them.

UV radiation impacts body weight, oxygen consumption, and shelter selection in the intertidal vertebrate Girella laevifrons.

PubMed

Pulgar, José; Waldisperg, Melany; Galbán-Malagón, Cristóbal; Maturana, Diego; Pulgar, Victor M; Aldana, Marcela

2017-02-01

The amount of ultraviolet (UV) radiation reaching the earth's surface has increased due to ozone layer depletion, and this fact represents an opportunity to evaluate the physiological and behavioral responses of animals to this global-scale stressor. The transitory fish Girella laevifrons inhabits pools in the upper intertidal zone, which is characterized by exposure to a wide range of stressors, including UV radiation. We documented the field magnitude and the impact of UV radiation on oxygen consumption, body mass variations, and shelter (rocky and algae) selection by G. laevifrons. UV-exposed animals showed increased oxygen consumption, slower body weight increase, and active rocky shelter selection. Control fish showed increased body weight and no evident shelter selection. The results indicated that UV exposure affects fish energetic balance and habitat selection to favor greater protection against radiation. Increased UV exposure in transitory intertidal animals at levels observed in upper intertidal pools may alter the residency time of fish before leaving for the subtidal zone. Therefore, UV-induced energetic changes may determine animal performance and ontogenetic physiological itineraries, whereas shelter quality might determine habitat use. Copyright © 2016 Elsevier B.V. All rights reserved.

Acoustic and satellite remote sensing of shallow nearshore marine habitats in the Gwaii Haanas National Marine Conservation Area

NASA Astrophysics Data System (ADS)

Reshitnyk, Luba Yvanka

The ability to map nearshore habitat (i.e. submerged aquatic vegetation) is an integral component of marine conservation. The main goal of this thesis was to examine the ability of high resolution, multispectral satellite imagery and a single-beam acoustic ground discrimination system to map the location of marine habitats in Bag Harbour, found in the Gwaii Haanas National Marine Conservation Area Reserve. To meet this goal, two objectives were addressed: (1) Using the QTC View V sing-beam acoustic ground discrimination system, identify which frequency (50 kHz or 200 kHz) is best suited for mapping marine habitat; (2) evaluate the ability to map nearshore marine habitat using WorldView-2 high resolution, multispectral satellite imagery and compare the results of marine habitat maps derived from the acoustic and satellite datasets. Ground-truth data for both acoustic and satellite data were collected via towed underwater video camera on June 3rd and 4th, 2012. Acoustic data (50 and 200 kHz) were collected on June 23rd and 24 th, 2012, respectively. The results of this study are organized into two papers. The first paper focuses on objective 1 where the QTC View V single-beam acoustic ground discrimination system was used to map nearshore habitat at a site within the Gwaii Haanas National Marine Conservation Area using two survey frequencies -- 50 kHz and 200 kHz. The results show that the 200 kHz data outperformed the 50 kHz data set in both thematic and spatial accuracy. The 200 kHz dataset was able to identify two species of submerged aquatic vegetation, eelgrass ( Zostera marina) and a red algae (Chondrocanthus exasperatus ) while the 50 kHz dataset was only able to detect the distribution of eelgrass. The best overall accuracy achieved with the 200 kHz dataset was 86% for a habitat map with three classes (dense eelgrass, dense red algae and unvegetated substrate) compared to the 50 kHz habitat classification with two classes (dense eelgrass and unvegetated substrate) that had an overall accuracy of 70%. Neither dataset was capable if discerning the distribution of green algae (Ulva spp.) or brown algae (Fucus spp.), also present at the site. The second paper examines the benthic habitat maps created using WorldView-2 satellite imagery and the QTC View V single-beam acoustic ground discrimination system (AGDS) at 200 kHz (objective 2). Optical and acoustic remote sensing technologies both present unique capabilities of mapping nearshore habitat. Acoustic systems are able to map habitat in subtidal regions outside of the range of optical sensors while optical sensors such as WorldView-2 provide higher spatial and spectral resolution. The results of this study found that the WorldView-2 achieved the highest overall accuracy (75%) for mapping shallow (<3 m) benthic classes (green algae, brown algae, eelgrass and unvegetated substrate). The 200 kHz data were found to perform best in deeper (>3 m) regions and were able to detect the distribution of eelgrass, red algae and unvegetated substrate. A final habitat map was produced composed of these outputs to create a final, comprehensive habitat map of Bag Harbour. These results highlight the benefits and limitations of each remote sensing technology from a conservation management perspective. The main benefits of the WorldView-2 imagery stem from the high resolution (2 x 2 m) pixel resolution, with a single image covering many kilometers of coastline, and ability to discern habitats in the intertidal region that were undetectable by AGDS. However, the main limitation of this technology is the ability to acquire imagery under ideal conditions (low tide and calm seas). In contrast, the QTC View V system requires more hours spent collecting acoustic data in the field, is limited in the number of habitats it is able to detect and creates maps based on interpolated point data (compared to the continuous raster data of the WorldView-2 imagery). If, however, the objectives of the conservation management to create high resolution benthic habitat maps of subtidal habitats (e.g. eelgrass and benthic red algae) at a handful of sites (in contrast to continuous coastal coverage), the QTC View V system is more suitable. Whichever system is used ground-truth data are required to train and validate each dataset.

First Report of Ciguatoxins in Two Starfish Species: Ophidiaster ophidianus and Marthasterias glacialis

PubMed Central

Silva, Marisa; Rodriguez, Inés; Barreiro, Aldo; Kaufmann, Manfred; Neto, Ana Isabel; Hassouani, Meryem; Sabour, Brahim; Alfonso, Amparo; Botana, Luis M.; Vasconcelos, Vitor

2015-01-01

Ciguatera fish poisoning (CFP) is a syndrome caused by the ingestion of fish contaminated with Ciguatoxins (CTXs). These phycotoxins are produced mainly by dinoflagellates that belong to the genus Gambierdiscus that are transformed in more toxic forms in predatory fish guts, and are more present in the Indo-Pacific and Caribbean areas. It is estimated that CFP causes per year more than 10,000 intoxications worldwide. With the rise of water temperature and anthropogenic intervention, it is important to study the prevalence of CFP in more temperate waters. Through inter- and subtidal sampling, 22 species of organisms were collected, in Madeira and Azores archipelagos and in the northwestern Moroccan coast, during September of 2012 and June and July of 2013. A total of 94 samples of 22 different species of bivalves, gastropods, echinoderms and crustaceans where analyzed by Ultra Performance Liquid Chromatography-Mass Spectometry-Ion Trap-Time of Flight (UPLC-MS-IT-TOF) and Ultra Performance Chromatography- Mass Spectrometry (UPLC-MS). Our main aim was to detect new vectors and ascertain if there were some geographical differences. We detected for the first time putative CTXs in echinoderms, in two starfish species—M. glacialis and O. ophidianus. We detected differences regarding uptake values by organisms and geographical location. Toxin amounts were significant, showing the importance and the need for continuity of these studies to gain more knowledge about the prevalence of these toxins, in order to better access human health risk. In addition, we suggest monitoring of these toxins should be extended to other vectors, starfish being a good alternative for protecting and accessing human health risk. PMID:26402702

Applying an ecosystem service approach to unravel links between ecosystems and society in the coast of central Chile.

PubMed

de Juan, Silvia; Gelcich, Stefan; Ospina-Alvarez, Andres; Perez-Matus, Alejandro; Fernandez, Miriam

2015-11-15

Ecosystem-based management implies understanding feedbacks between ecosystems and society. Such understanding can be approached with the Drivers-Pressures-State change-Impacts-Response framework (DPSIR), incorporating stakeholders' preferences for ecosystem services to assess impacts on society. This framework was adapted to six locations in the central coast of Chile, where artisanal fisheries coexist with an increasing influx of tourists, and a set of fisheries management areas alternate with open access areas and a no-take Marine Protected Area (MPA). The ecosystem services in the study area were quantified using biomass and species richness in intertidal and subtidal areas as biological indicators. The demand for ecosystem services was elicited by interviews to the principal groups of users. Our results evidenced decreasing landings and a negative perception of fishermen on temporal trends of catches. The occurrence of recreational fishing was negligible, although the consumption of seafood by tourists was relatively high. Nevertheless, the consumption of organisms associated to the study system was low, which could be linked, amongst other factors, to decreasing catches. The comparison of biological indicators between management regimens provided variable results, but a positive effect of management areas and the MPA on some of the metrics was observed. The prioritising of ecosystem attributes by tourists was highly homogenous across the six locations, with "scenic beauty" consistently selected as the preferred attribute, followed by "diversity". The DPSIR framework illustrated the complex interactions existing in these locations, with weak linkages between society's priorities, existing management objectives and the state of biological communities. Overall, this work improved our knowledge on relations between components of coastal areas in central Chile, of paramount importance to advance towards an ecosystem-based management in the area. Copyright © 2015 Elsevier B.V. All rights reserved.

Tropical Estuarine Macrobenthic Communities Are Structured by Turnover Rather than Nestedness

PubMed Central

Medeiros, Carlinda Raílly; Hepp, Luiz Ubiratan; Patrício, Joana; Molozzi, Joseline

2016-01-01

Turnover (i.e., species substitution) and nestedness (i.e., subsets of species from more diverse locations), the two main mechanisms used to explain the beta diversity of biological communities, have different implications for biodiversity conservation. To better understand how these mechanisms contribute to beta diversity, we tested the following hypotheses: (i) greater dissimilarity in community composition occurs between estuarine zones than other hierarchical level studied; (ii) beta diversity in these communities develops by turnover in estuaries with a lower degree of anthropogenic impact, but by nestedness in estuaries with a greater degree of anthropogenic impact; and (iii) the structuring mechanism is independent of season. We studied two tropical estuaries (dry and wet seasons) that vary in terms of land-use of the drainage basins. Subtidal benthic macroinvertebrates were sampled along the estuarine gradient in each of the two estuaries. The additive partitioning approach to species diversity was used to determine the hierarchical scale with the greatest dissimilarity in community composition. General beta diversity was measured using the Sorensen dissimilarity index, partitioning the turnover and nestedness components. The greatest dissimilarity in the composition of the communities occurred between the zones along the estuarine gradient in both seasons (dry = 58.6%; wet = 46.3%). In the estuary with a lower degree of anthropogenic influence, benthic macroinvertebrate diversity was generated by turnover regardless of the season. In the estuary with a greater degree of anthropogenic impact, beta diversity was structured by turnover during the dry season and a combination of both mechanisms during the wet season. We conclude that turnover is the principal mechanism responsible for beta diversity in benthic macroinvertebrate communities in tropical estuaries. PMID:27584726

Tropical Estuarine Macrobenthic Communities Are Structured by Turnover Rather than Nestedness.

PubMed

Medeiros, Carlinda Raílly; Hepp, Luiz Ubiratan; Patrício, Joana; Molozzi, Joseline

2016-01-01

Turnover (i.e., species substitution) and nestedness (i.e., subsets of species from more diverse locations), the two main mechanisms used to explain the beta diversity of biological communities, have different implications for biodiversity conservation. To better understand how these mechanisms contribute to beta diversity, we tested the following hypotheses: (i) greater dissimilarity in community composition occurs between estuarine zones than other hierarchical level studied; (ii) beta diversity in these communities develops by turnover in estuaries with a lower degree of anthropogenic impact, but by nestedness in estuaries with a greater degree of anthropogenic impact; and (iii) the structuring mechanism is independent of season. We studied two tropical estuaries (dry and wet seasons) that vary in terms of land-use of the drainage basins. Subtidal benthic macroinvertebrates were sampled along the estuarine gradient in each of the two estuaries. The additive partitioning approach to species diversity was used to determine the hierarchical scale with the greatest dissimilarity in community composition. General beta diversity was measured using the Sorensen dissimilarity index, partitioning the turnover and nestedness components. The greatest dissimilarity in the composition of the communities occurred between the zones along the estuarine gradient in both seasons (dry = 58.6%; wet = 46.3%). In the estuary with a lower degree of anthropogenic influence, benthic macroinvertebrate diversity was generated by turnover regardless of the season. In the estuary with a greater degree of anthropogenic impact, beta diversity was structured by turnover during the dry season and a combination of both mechanisms during the wet season. We conclude that turnover is the principal mechanism responsible for beta diversity in benthic macroinvertebrate communities in tropical estuaries.

Host quality and spatial patterning in infections of the Eastern mudsnail (Ilyanassa obsoleta) by two trematodes (Himasthla quissetensis and Zoogonus rubellus).

PubMed

Rossiter, Wayne; Sukhdeo, Michael V K

2012-04-01

Several studies have suggested that the fitness of a parasite can be directly impacted by the quality of its host. In such cases, selective pressures could act to funnel parasites towards the highest-quality hosts in a population. The results of this study demonstrate that snail host quality is strongly correlated with spatial patterning in trematode infections and that habitat type is the underlying driver for both of these variables. Two trematodes (Himasthla quissetensis and Zoogonus rubellus) with very different life cycles assume the same spatial infection pattern in populations of the first intermediate host (Ilyanassa obsoleta) in coastal marsh habitats. Infected snails are disproportionately recovered from intertidal panne habitats, which offer more hospitable environs for snails than do adjacent habitats (intertidal creeks, coastal flats, and subtidal creeks), in terms of protection from turbulence and wave action, as well as the availability of food stuffs. Snails in intertidal panne habitats are of higher quality when assessed in terms of average size-specific mass, growth rate, and fecundity. In mark-recapture experiments, snails frequently dispersed into intertidal pannes but were never observed leaving them. In addition, field experiments demonstrate that snails confined to intertidal panne habitats are disproportionately infected by both trematode species, relative to conspecifics confined to adjacent habitats. Laboratory experiments show that infected snails suffer significant energetic losses and consume more than uninfected conspecifics, suggesting that infected snails in intertidal pannes may survive better than in adjacent habitats. We speculate that 1 possible mechanism for the observed patterns is that the life cycles of both trematode species allows them to contact the highest-quality snails in this marsh ecosystem.

Responses of estuarine circulation and salinity to the loss of intertidal flats – A modeling study

DOE PAGES

Yang, Zhaoqing; Wang, Taiping

2015-08-25

Intertidal flats in estuaries are coastal wetlands that provide critical marine habitats to support wide ranges of marine species. Over the last century many estuarine systems have experienced significant loss of intertidal flats due to anthropogenic impacts. This paper presents a modeling study conducted to investigate the responses of estuarine hydrodynamics to the loss of intertidal flats caused by anthropogenic actions in Whidbey Basin of Puget Sound on the northwest coast of North America. Changes in salinity intrusion limits in the estuaries, salinity stratification, and circulation in intertidal flats and estuaries were evaluated by comparing model results under the existingmore » baseline condition and the no-flat condition. Model results showed that loss of intertidal flats results in an increase in salinity intrusion, stronger mixing, and a phase shift in salinity and velocity fields in the bay front areas. Model results also indicated that loss of intertidal flats enhances two-layer circulation, especially the bottom water intrusion. Loss of intertidal flats increases the mean salinity but reduces the salinity range in the subtidal flats over a tidal cycle because of increased mixing. Salinity intrusion limits extend upstream in all three major rivers discharging into Whidbey Basin when no intertidal flats are present. Changes in salinity intrusion and estuarine circulation patterns due to loss of intertidal flats affect the nearshore habitat and water quality in estuaries and potentially increase risk of coastal hazards, such as storm surge and coastal flooding. Furthermore, model results suggested the importance of including intertidal flats and the wetting-and-drying process in hydrodynamic simulations when intertidal flats are present in the model domain.« less