Optimal simultaneous superpositioning of multiple structures with missing data.

PubMed

Theobald, Douglas L; Steindel, Phillip A

2012-08-01

Superpositioning is an essential technique in structural biology that facilitates the comparison and analysis of conformational differences among topologically similar structures. Performing a superposition requires a one-to-one correspondence, or alignment, of the point sets in the different structures. However, in practice, some points are usually 'missing' from several structures, for example, when the alignment contains gaps. Current superposition methods deal with missing data simply by superpositioning a subset of points that are shared among all the structures. This practice is inefficient, as it ignores important data, and it fails to satisfy the common least-squares criterion. In the extreme, disregarding missing positions prohibits the calculation of a superposition altogether. Here, we present a general solution for determining an optimal superposition when some of the data are missing. We use the expectation-maximization algorithm, a classic statistical technique for dealing with incomplete data, to find both maximum-likelihood solutions and the optimal least-squares solution as a special case. The methods presented here are implemented in THESEUS 2.0, a program for superpositioning macromolecular structures. ANSI C source code and selected compiled binaries for various computing platforms are freely available under the GNU open source license from http://www.theseus3d.org. dtheobald@brandeis.edu Supplementary data are available at Bioinformatics online.

Evaluation of six TPS algorithms in computing entrance and exit doses.

PubMed

Tan, Yun I; Metwaly, Mohamed; Glegg, Martin; Baggarley, Shaun; Elliott, Alex

2014-05-08

Entrance and exit doses are commonly measured in in vivo dosimetry for comparison with expected values, usually generated by the treatment planning system (TPS), to verify accuracy of treatment delivery. This report aims to evaluate the accuracy of six TPS algorithms in computing entrance and exit doses for a 6 MV beam. The algorithms tested were: pencil beam convolution (Eclipse PBC), analytical anisotropic algorithm (Eclipse AAA), AcurosXB (Eclipse AXB), FFT convolution (XiO Convolution), multigrid superposition (XiO Superposition), and Monte Carlo photon (Monaco MC). Measurements with ionization chamber (IC) and diode detector in water phantoms were used as a reference. Comparisons were done in terms of central axis point dose, 1D relative profiles, and 2D absolute gamma analysis. Entrance doses computed by all TPS algorithms agreed to within 2% of the measured values. Exit doses computed by XiO Convolution, XiO Superposition, Eclipse AXB, and Monaco MC agreed with the IC measured doses to within 2%-3%. Meanwhile, Eclipse PBC and Eclipse AAA computed exit doses were higher than the IC measured doses by up to 5.3% and 4.8%, respectively. Both algorithms assume that full backscatter exists even at the exit level, leading to an overestimation of exit doses. Despite good agreements at the central axis for Eclipse AXB and Monaco MC, 1D relative comparisons showed profiles mismatched at depths beyond 11.5 cm. Overall, the 2D absolute gamma (3%/3 mm) pass rates were better for Monaco MC, while Eclipse AXB failed mostly at the outer 20% of the field area. The findings of this study serve as a useful baseline for the implementation of entrance and exit in vivo dosimetry in clinical departments utilizing any of these six common TPS algorithms for reference comparison.

MultiSETTER: web server for multiple RNA structure comparison.

PubMed

Čech, Petr; Hoksza, David; Svozil, Daniel

2015-08-12

Understanding the architecture and function of RNA molecules requires methods for comparing and analyzing their tertiary and quaternary structures. While structural superposition of short RNAs is achievable in a reasonable time, large structures represent much bigger challenge. Therefore, we have developed a fast and accurate algorithm for RNA pairwise structure superposition called SETTER and implemented it in the SETTER web server. However, though biological relationships can be inferred by a pairwise structure alignment, key features preserved by evolution can be identified only from a multiple structure alignment. Thus, we extended the SETTER algorithm to the alignment of multiple RNA structures and developed the MultiSETTER algorithm. In this paper, we present the updated version of the SETTER web server that implements a user friendly interface to the MultiSETTER algorithm. The server accepts RNA structures either as the list of PDB IDs or as user-defined PDB files. After the superposition is computed, structures are visualized in 3D and several reports and statistics are generated. To the best of our knowledge, the MultiSETTER web server is the first publicly available tool for a multiple RNA structure alignment. The MultiSETTER server offers the visual inspection of an alignment in 3D space which may reveal structural and functional relationships not captured by other multiple alignment methods based either on a sequence or on secondary structure motifs.

Fast Electromagnetic Solvers for Large-Scale Naval Scattering Problems

DTIC Science & Technology

2008-09-27

IEEE Trans. Antennas Propag., vol. 52, no. 8, pp. 2141–2146, 2004. [12] R. J. Burkholder and J. F. Lee, “Fast dual-MGS block-factorization algorithm...Golub and C. F. V. Loan, Matrix Computations. Baltimore: The Johns Hopkins University Press, 1996. [20] W. D. Li, W. Hong, and H. X. Zhou, “Integral

Improved scatter correction using adaptive scatter kernel superposition

NASA Astrophysics Data System (ADS)

Sun, M.; Star-Lack, J. M.

2010-11-01

Accurate scatter correction is required to produce high-quality reconstructions of x-ray cone-beam computed tomography (CBCT) scans. This paper describes new scatter kernel superposition (SKS) algorithms for deconvolving scatter from projection data. The algorithms are designed to improve upon the conventional approach whose accuracy is limited by the use of symmetric kernels that characterize the scatter properties of uniform slabs. To model scatter transport in more realistic objects, nonstationary kernels, whose shapes adapt to local thickness variations in the projection data, are proposed. Two methods are introduced: (1) adaptive scatter kernel superposition (ASKS) requiring spatial domain convolutions and (2) fast adaptive scatter kernel superposition (fASKS) where, through a linearity approximation, convolution is efficiently performed in Fourier space. The conventional SKS algorithm, ASKS, and fASKS, were tested with Monte Carlo simulations and with phantom data acquired on a table-top CBCT system matching the Varian On-Board Imager (OBI). All three models accounted for scatter point-spread broadening due to object thickening, object edge effects, detector scatter properties and an anti-scatter grid. Hounsfield unit (HU) errors in reconstructions of a large pelvis phantom with a measured maximum scatter-to-primary ratio over 200% were reduced from -90 ± 58 HU (mean ± standard deviation) with no scatter correction to 53 ± 82 HU with SKS, to 19 ± 25 HU with fASKS and to 13 ± 21 HU with ASKS. HU accuracies and measured contrast were similarly improved in reconstructions of a body-sized elliptical Catphan phantom. The results show that the adaptive SKS methods offer significant advantages over the conventional scatter deconvolution technique.

Optimal simultaneous superpositioning of multiple structures with missing data

PubMed Central

Theobald, Douglas L.; Steindel, Phillip A.

2012-01-01

Motivation: Superpositioning is an essential technique in structural biology that facilitates the comparison and analysis of conformational differences among topologically similar structures. Performing a superposition requires a one-to-one correspondence, or alignment, of the point sets in the different structures. However, in practice, some points are usually ‘missing’ from several structures, for example, when the alignment contains gaps. Current superposition methods deal with missing data simply by superpositioning a subset of points that are shared among all the structures. This practice is inefficient, as it ignores important data, and it fails to satisfy the common least-squares criterion. In the extreme, disregarding missing positions prohibits the calculation of a superposition altogether. Results: Here, we present a general solution for determining an optimal superposition when some of the data are missing. We use the expectation–maximization algorithm, a classic statistical technique for dealing with incomplete data, to find both maximum-likelihood solutions and the optimal least-squares solution as a special case. Availability and implementation: The methods presented here are implemented in THESEUS 2.0, a program for superpositioning macromolecular structures. ANSI C source code and selected compiled binaries for various computing platforms are freely available under the GNU open source license from http://www.theseus3d.org. Contact: dtheobald@brandeis.edu Supplementary information: Supplementary data are available at Bioinformatics online. PMID:22543369

Solving modal equations of motion with initial conditions using MSC/NASTRAN DMAP. Part 1: Implementing exact mode superposition

NASA Technical Reports Server (NTRS)

Abdallah, Ayman A.; Barnett, Alan R.; Ibrahim, Omar M.; Manella, Richard T.

1993-01-01

Within the MSC/NASTRAN DMAP (Direct Matrix Abstraction Program) module TRD1, solving physical (coupled) or modal (uncoupled) transient equations of motion is performed using the Newmark-Beta or mode superposition algorithms, respectively. For equations of motion with initial conditions, only the Newmark-Beta integration routine has been available in MSC/NASTRAN solution sequences for solving physical systems and in custom DMAP sequences or alters for solving modal systems. In some cases, one difficulty with using the Newmark-Beta method is that the process of selecting suitable integration time steps for obtaining acceptable results is lengthy. In addition, when very small step sizes are required, a large amount of time can be spent integrating the equations of motion. For certain aerospace applications, a significant time savings can be realized when the equations of motion are solved using an exact integration routine instead of the Newmark-Beta numerical algorithm. In order to solve modal equations of motion with initial conditions and take advantage of efficiencies gained when using uncoupled solution algorithms (like that within TRD1), an exact mode superposition method using MSC/NASTRAN DMAP has been developed and successfully implemented as an enhancement to an existing coupled loads methodology at the NASA Lewis Research Center.

Ten-Meter Scale Topography and Roughness of Mars Exploration Rovers Landing Sites and Martian Polar Regions

NASA Technical Reports Server (NTRS)

Ivanov, Anton B.

2003-01-01

The Mars Orbiter Camera (MOC) has been operating on board of the Mars Global Surveyor (MGS) spacecraft since 1998. It consists of three cameras - Red and Blue Wide Angle cameras (FOV=140 deg.) and Narrow Angle camera (FOV=0.44 deg.). The Wide Angle camera allows surface resolution down to 230 m/pixel and the Narrow Angle camera - down to 1.5 m/pixel. This work is a continuation of the project, which we have reported previously. Since then we have refined and improved our stereo correlation algorithm and have processed many more stereo pairs. We will discuss results of our stereo pair analysis located in the Mars Exploration rovers (MER) landing sites and address feasibility of recovering topography from stereo pairs (especially in the polar regions), taken during MGS 'Relay-16' mode.

Fast, large-scale hologram calculation in wavelet domain

NASA Astrophysics Data System (ADS)

Shimobaba, Tomoyoshi; Matsushima, Kyoji; Takahashi, Takayuki; Nagahama, Yuki; Hasegawa, Satoki; Sano, Marie; Hirayama, Ryuji; Kakue, Takashi; Ito, Tomoyoshi

2018-04-01

We propose a large-scale hologram calculation using WAvelet ShrinkAge-Based superpositIon (WASABI), a wavelet transform-based algorithm. An image-type hologram calculated using the WASABI method is printed on a glass substrate with the resolution of 65 , 536 × 65 , 536 pixels and a pixel pitch of 1 μm. The hologram calculation time amounts to approximately 354 s on a commercial CPU, which is approximately 30 times faster than conventional methods.

The Quantum Binding Problem in the Context of Associative Memory

PubMed Central

Wichert, Andreas

2016-01-01

We present a method to solve the binding problem by using a quantum algorithm for the retrieval of associations from associative memory during visual scene analysis. The problem is solved by mapping the information representing different objects into superposition by using entanglement and Grover’s amplification algorithm. PMID:27603782

Superposition of polarized waves at layered media: theoretical modeling and measurement

NASA Astrophysics Data System (ADS)

Finkele, Rolf; Wanielik, Gerd

1997-12-01

The detection of ice layers on road surfaces is a crucial requirement for a system that is designed to warn vehicle drivers of hazardous road conditions. In the millimeter wave regime at 76 GHz the dielectric constant of ice and conventional road surface materials (i.e. asphalt, concrete) is found to be nearly similar. Thus, if the layer of ice is very thin and thus is of the same shape of roughness as the underlying road surface it cannot be securely detected using conventional algorithmic approaches. The method introduced in this paper extents and applies the theoretical work of Pancharatnam on the superposition of polarized waves. The projection of the Stokes vectors onto the Poincare sphere traces a circle due to the variation of the thickness of the ice layer. The paper presents a method that utilizes the concept of wave superposition to detect this trace even if it is corrupted by stochastic variation due to rough surface scattering. Measurement results taken under real traffic conditions prove the validity of the proposed algorithms. Classification results are presented and the results discussed.

Evaluation of six TPS algorithms in computing entrance and exit doses

PubMed Central

Metwaly, Mohamed; Glegg, Martin; Baggarley, Shaun P.; Elliott, Alex

2014-01-01

Entrance and exit doses are commonly measured in in vivo dosimetry for comparison with expected values, usually generated by the treatment planning system (TPS), to verify accuracy of treatment delivery. This report aims to evaluate the accuracy of six TPS algorithms in computing entrance and exit doses for a 6 MV beam. The algorithms tested were: pencil beam convolution (Eclipse PBC), analytical anisotropic algorithm (Eclipse AAA), AcurosXB (Eclipse AXB), FFT convolution (XiO Convolution), multigrid superposition (XiO Superposition), and Monte Carlo photon (Monaco MC). Measurements with ionization chamber (IC) and diode detector in water phantoms were used as a reference. Comparisons were done in terms of central axis point dose, 1D relative profiles, and 2D absolute gamma analysis. Entrance doses computed by all TPS algorithms agreed to within 2% of the measured values. Exit doses computed by XiO Convolution, XiO Superposition, Eclipse AXB, and Monaco MC agreed with the IC measured doses to within 2%‐3%. Meanwhile, Eclipse PBC and Eclipse AAA computed exit doses were higher than the IC measured doses by up to 5.3% and 4.8%, respectively. Both algorithms assume that full backscatter exists even at the exit level, leading to an overestimation of exit doses. Despite good agreements at the central axis for Eclipse AXB and Monaco MC, 1D relative comparisons showed profiles mismatched at depths beyond 11.5 cm. Overall, the 2D absolute gamma (3%/3 mm) pass rates were better for Monaco MC, while Eclipse AXB failed mostly at the outer 20% of the field area. The findings of this study serve as a useful baseline for the implementation of entrance and exit in vivo dosimetry in clinical departments utilizing any of these six common TPS algorithms for reference comparison. PACS numbers: 87.55.‐x, 87.55.D‐, 87.55.N‐, 87.53.Bn PMID:24892349

Decentralized Energy Management System for Networked Microgrids in Grid-connected and Islanded Modes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Zhaoyu; Chen, Bokan; Wang, Jianhui

This paper proposes a decentralized energy management system (EMS) for the coordinated operation of networked Microgirds (MGs) in a distribution system. In the grid-connected mode, the distribution network operator (DNO) and each MG are considered as distinct entities with individual objectives to minimize their own operation costs. It is assumed that both dispatchable and renewable energy source (RES)-based distributed generators (DGs) exist in the distribution network and the networked MGs. In order to coordinate the operation of all entities, we apply a decentralized bi-level algorithm to solve the problem with the first level to conduct negotiations among all entities andmore » the second level to update the non-converging penalties. In the islanded mode, the objective of each MG is to maintain a reliable power supply to its customers. In order to take into account the uncertainties of DG outputs and load consumption, we formulate the problems as two-stage stochastic programs. The first stage is to determine base generation setpoints based on the forecasts and the second stage is to adjust the generation outputs based on the realized scenarios. Case studies of a distribution system with networked MGs demonstrate the effectiveness of the proposed methodology in both grid-connected and islanded modes.« less

iso-Migrastatin, Migrastatin, and Dorrigocin Production in Streptomyces platensis NRRL 18993 Is Governed by a Single Biosynthetic Machinery Featuring an Acyltransferase-less Type I Polyketide Synthase*

PubMed Central

Lim, Si-Kyu; Ju, Jianhua; Zazopoulos, Emmanuel; Jiang, Hui; Seo, Jeong-Woo; Chen, Yihua; Feng, Zhiyang; Rajski, Scott R.; Farnet, Chris M.; Shen, Ben

2009-01-01

iso-Migrastatin and related glutarimide-containing polyketides are potent inhibitors of tumor cell migration and their implied potential as antimetastatic agents for human cancers has garnered significant attention. Genome scanning of Streptomyces platensis NRRL 18993 unveiled two candidate gene clusters (088D and mgs); each encodes acyltransferase-less type I polyketide synthases commensurate with iso-migrastatin biosynthesis. Both clusters were inactivated by λ-RED-mediated PCR-targeting mutagenesis in S. platensis; iso-migrastatin production was completely abolished in the ΔmgsF mutant SB11012 strain, whereas inactivation of 088D-orf7 yielded the SB11006 strain that exhibited no discernible change in iso-migrastatin biosynthesis. These data indicate that iso-migrastatin production is governed by the mgs cluster. Systematic gene inactivation allowed determination of the precise boundaries of the mgs cluster and the essentiality of the genes within the mgs cluster in iso-migrastatin production. The mgs cluster consists of 11 open reading frames that encode three acyltransferase-less type I polyketide synthases (MgsEFG), one discrete acyltransferase (MgsH), a type II thioesterase (MgsB), three post-PKS tailoring enzymes (MgsIJK), two glutarimide biosynthesis enzymes (MgsCD), and one regulatory protein (MgsA). A model for iso-migrastatin biosynthesis is proposed based on functional assignments derived from bioinformatics and is further supported by the results of in vivo gene inactivation experiments. PMID:19726666

Implementation and validation of collapsed cone superposition for radiopharmaceutical dosimetry of photon emitters

NASA Astrophysics Data System (ADS)

Sanchez-Garcia, Manuel; Gardin, Isabelle; Lebtahi, Rachida; Dieudonné, Arnaud

2015-10-01

Two collapsed cone (CC) superposition algorithms have been implemented for radiopharmaceutical dosimetry of photon emitters. The straight CC (SCC) superposition method uses a water energy deposition kernel (EDKw) for each electron, positron and photon components, while the primary and scatter CC (PSCC) superposition method uses different EDKw for primary and once-scattered photons. PSCC was implemented only for photons originating from the nucleus, precluding its application to positron emitters. EDKw are linearly scaled by radiological distance, taking into account tissue density heterogeneities. The implementation was tested on 100, 300 and 600 keV mono-energetic photons and 18F, 99mTc, 131I and 177Lu. The kernels were generated using the Monte Carlo codes MCNP and EGSnrc. The validation was performed on 6 phantoms representing interfaces between soft-tissues, lung and bone. The figures of merit were γ (3%, 3 mm) and γ (5%, 5 mm) criterions corresponding to the computation comparison on 80 absorbed doses (AD) points per phantom between Monte Carlo simulations and CC algorithms. PSCC gave better results than SCC for the lowest photon energy (100 keV). For the 3 isotopes computed with PSCC, the percentage of AD points satisfying the γ (5%, 5 mm) criterion was always over 99%. A still good but worse result was found with SCC, since at least 97% of AD-values verified the γ (5%, 5 mm) criterion, except a value of 57% for the 99mTc with the lung/bone interface. The CC superposition method for radiopharmaceutical dosimetry is a good alternative to Monte Carlo simulations while reducing computation complexity.

Implementation and validation of collapsed cone superposition for radiopharmaceutical dosimetry of photon emitters.

PubMed

Sanchez-Garcia, Manuel; Gardin, Isabelle; Lebtahi, Rachida; Dieudonné, Arnaud

2015-10-21

Two collapsed cone (CC) superposition algorithms have been implemented for radiopharmaceutical dosimetry of photon emitters. The straight CC (SCC) superposition method uses a water energy deposition kernel (EDKw) for each electron, positron and photon components, while the primary and scatter CC (PSCC) superposition method uses different EDKw for primary and once-scattered photons. PSCC was implemented only for photons originating from the nucleus, precluding its application to positron emitters. EDKw are linearly scaled by radiological distance, taking into account tissue density heterogeneities. The implementation was tested on 100, 300 and 600 keV mono-energetic photons and (18)F, (99m)Tc, (131)I and (177)Lu. The kernels were generated using the Monte Carlo codes MCNP and EGSnrc. The validation was performed on 6 phantoms representing interfaces between soft-tissues, lung and bone. The figures of merit were γ (3%, 3 mm) and γ (5%, 5 mm) criterions corresponding to the computation comparison on 80 absorbed doses (AD) points per phantom between Monte Carlo simulations and CC algorithms. PSCC gave better results than SCC for the lowest photon energy (100 keV). For the 3 isotopes computed with PSCC, the percentage of AD points satisfying the γ (5%, 5 mm) criterion was always over 99%. A still good but worse result was found with SCC, since at least 97% of AD-values verified the γ (5%, 5 mm) criterion, except a value of 57% for the (99m)Tc with the lung/bone interface. The CC superposition method for radiopharmaceutical dosimetry is a good alternative to Monte Carlo simulations while reducing computation complexity.

iso-Migrastatin, migrastatin, and dorrigocin production in Streptomyces platensis NRRL 18993 is governed by a single biosynthetic machinery featuring an acyltransferase-less type I polyketide synthase.

PubMed

Lim, Si-Kyu; Ju, Jianhua; Zazopoulos, Emmanuel; Jiang, Hui; Seo, Jeong-Woo; Chen, Yihua; Feng, Zhiyang; Rajski, Scott R; Farnet, Chris M; Shen, Ben

2009-10-23

iso-Migrastatin and related glutarimide-containing polyketides are potent inhibitors of tumor cell migration and their implied potential as antimetastatic agents for human cancers has garnered significant attention. Genome scanning of Streptomyces platensis NRRL 18993 unveiled two candidate gene clusters (088D and mgs); each encodes acyltransferase-less type I polyketide synthases commensurate with iso-migrastatin biosynthesis. Both clusters were inactivated by lambda-RED-mediated PCR-targeting mutagenesis in S. platensis; iso-migrastatin production was completely abolished in the DeltamgsF mutant SB11012 strain, whereas inactivation of 088D-orf7 yielded the SB11006 strain that exhibited no discernible change in iso-migrastatin biosynthesis. These data indicate that iso-migrastatin production is governed by the mgs cluster. Systematic gene inactivation allowed determination of the precise boundaries of the mgs cluster and the essentiality of the genes within the mgs cluster in iso-migrastatin production. The mgs cluster consists of 11 open reading frames that encode three acyltransferase-less type I polyketide synthases (MgsEFG), one discrete acyltransferase (MgsH), a type II thioesterase (MgsB), three post-PKS tailoring enzymes (MgsIJK), two glutarimide biosynthesis enzymes (MgsCD), and one regulatory protein (MgsA). A model for iso-migrastatin biosynthesis is proposed based on functional assignments derived from bioinformatics and is further supported by the results of in vivo gene inactivation experiments.

Titer improvement of iso-migrastatin in selected heterologous Streptomyces hosts and related analysis of mRNA expression by quantitative RT–PCR

PubMed Central

Yang, Dong; Zhu, Xiangcheng; Wu, Xueyun; Feng, Zhiyang; Huang, Lei; Shen, Ben; Xu, Zhinan

2011-01-01

iso-Migrastatin (iso-MGS) has been actively pursued recently as an outstanding candidate of antimetastasis agents. Having characterized the iso-MGS biosynthetic gene cluster from its native producer Streptomyces platensis NRRL 18993, we have recently succeeded in producing iso-MGS in five selected heterologous Streptomyces hosts, albeit the low titers failed to meet expectations and cast doubt on the utility of this novel technique for large-scale production. To further explore and capitalize on the production capacity of these hosts, a thorough investigation of these five engineered strains with three fermentation media for iso-MGS production was undertaken. Streptomyces albus J1074 and Streptomyces lividans K4-114 were found to be preferred heterologous hosts, and subsequent analysis of carbon and nitrogen sources revealed that sucrose and yeast extract were ideal for iso-MGS production. After the initial optimization, the titers of iso-MGS in all five hosts were considerably improved by 3–18-fold in the optimized R2YE medium. Furthermore, the iso-MGS titer of S. albus J1074 (pBS11001) was significantly improved to 186.7 mg/L by a hybrid medium strategy. Addition of NaHCO3 to the latter finally afforded an optimized iso-MGS titer of 213.8 mg/L, about 5-fold higher than the originally reported system. With S. albus J1074 (pBS11001) as a model host, the expression of iso-MGS gene cluster in four different media was systematically studied via the quantitative RT–PCR technology. The resultant comparison revealed the correlation of gene expression and iso-MGS production for the first time; synchronous expression of the whole gene cluster was crucial for optimal iso-MGS production. These results reveal new insights into the iso-MGS biosynthetic machinery in heterologous hosts and provide the primary data to realize large-scale production of iso-MGS for further preclinical studies. PMID:21132287

Oxidation feature and diffusion mechanism of Zr-based metallic glasses near the glass transition point

NASA Astrophysics Data System (ADS)

Hu, Zheng; Lei, Xianqi; Wang, Yang; Zhang, Kun

2018-03-01

The oxidation behaviors of as-cast, pre-deformed, and crystallized Zr47.9Ti0.3Ni3.1Cu39.3Al9.4 metallic glasses (MGs) were studied near the glass transition point. The oxidation kinetics of the crystallized MGs followed a parabolic-rate law, and the as-cast and pre-deformed MGs exerted a typical two-stage behavior above the glass transition temperature (T g). Most interesting, pre-deformed treatment can significantly improve the oxidation rate of MGs, as the initial oxidation appeared earlier than for the as-cast MGs, and was accompanied by much thicker oxide scale. The EDS and XPS results showed that the metal Al acted as the preferred scavenger that absorbed intrinsic oxygen in the near-surface region of as-cast MGs. However, a homogeneous mixed layer without Al was observed in the pre-deformed MGs. We speculated the accelerated diffusion of other elements in the MGs was due to the local increase in the free volume and significant shear-induced dilation of the local structure. The results from this study demonstrate that MGs exhibit controllable atomic diffusion during the oxidation process, which can facilitate use in super-cooled liquid region applications.

Optical threshold secret sharing scheme based on basic vector operations and coherence superposition

NASA Astrophysics Data System (ADS)

Deng, Xiaopeng; Wen, Wei; Mi, Xianwu; Long, Xuewen

2015-04-01

We propose, to our knowledge for the first time, a simple optical algorithm for secret image sharing with the (2,n) threshold scheme based on basic vector operations and coherence superposition. The secret image to be shared is firstly divided into n shadow images by use of basic vector operations. In the reconstruction stage, the secret image can be retrieved by recording the intensity of the coherence superposition of any two shadow images. Compared with the published encryption techniques which focus narrowly on information encryption, the proposed method can realize information encryption as well as secret sharing, which further ensures the safety and integrality of the secret information and prevents power from being kept centralized and abused. The feasibility and effectiveness of the proposed method are demonstrated by numerical results.

Overproduction of lactimidomycin by cross-overexpression of genes encoding Streptomyces antibiotic regulatory proteins.

PubMed

Zhang, Bo; Yang, Dong; Yan, Yijun; Pan, Guohui; Xiang, Wensheng; Shen, Ben

2016-03-01

The glutarimide-containing polyketides represent a fascinating class of natural products that exhibit a multitude of biological activities. We have recently cloned and sequenced the biosynthetic gene clusters for three members of the glutarimide-containing polyketides-iso-migrastatin (iso-MGS) from Streptomyces platensis NRRL 18993, lactimidomycin (LTM) from Streptomyces amphibiosporus ATCC 53964, and cycloheximide (CHX) from Streptomyces sp. YIM56141. Comparative analysis of the three clusters identified mgsA and chxA, from the mgs and chx gene clusters, respectively, that were predicted to encode the PimR-like Streptomyces antibiotic regulatory proteins (SARPs) but failed to reveal any regulatory gene from the ltm gene cluster. Overexpression of mgsA or chxA in S. platensis NRRL 18993, Streptomyces sp. YIM56141 or SB11024, and a recombinant strain of Streptomyces coelicolor M145 carrying the intact mgs gene cluster has no significant effect on iso-MGS or CHX production, suggesting that MgsA or ChxA regulation may not be rate-limiting for iso-MGS and CHX production in these producers. In contrast, overexpression of mgsA or chxA in S. amphibiosporus ATCC 53964 resulted in a significant increase in LTM production, with LTM titer reaching 106 mg/L, which is five-fold higher than that of the wild-type strain. These results support MgsA and ChxA as members of the SARP family of positive regulators for the iso-MGS and CHX biosynthetic machinery and demonstrate the feasibility to improve glutarimide-containing polyketide production in Streptomyces strains by exploiting common regulators.

Correlations between gait speed, 6-minute walk distance, physical activity, and self-efficacy in patients with severe chronic lung disease.

PubMed

DePew, Zachary S; Karpman, Craig; Novotny, Paul J; Benzo, Roberto P

2013-12-01

Four-meter gait speed (4MGS) has been associated with functional capacity and overall mortality in elderly patients, and may easily be translated to daily practice. We evaluated the association of 4MGS with meaningful outcomes. In 70 subjects we conducted the 4MGS, 6-min walk test (6MWT), objectively measured physical activity, and assessed dyspnea, quality of life, and self-efficacy for walking and routine physical activity. 4MGS was measured in 3 separate time epochs during the 6MWT, to explore 4MGS variability. Diagnoses included COPD (51.4%), interstitial lung disease (38.6%), and other pulmonary conditions (10%). The mean ± SD values were: 4MGS 0.85 ± 0.21 m/s, 6-min walk distance (6MWD) 305 ± 115 m, and physical activity level 1.28 ± 0.17, which is consistent with severe physical inactivity. The gait speeds within the time epochs 1-2, 3-4, and 5-6 min during the 6MWT were not significantly different: 1.01 ± 0.29 m/s, 0.98 ± 0.31 m/s, and 1.00 ± 0.31 m/s, respectively. 4MGS had a significant correlation with 6MWD (r = 0.70, P < .001). 6MWD was the dominant variable for predicting 4MGS. Other significant predictors of 4MGS included dyspnea, self-efficacy, quality of life, and objectively measured physical activity. 4MGS is significantly and independently associated with 6MWD, and may serve as a reasonable simple surrogate for 6MWD in subjects with chronic lung disease. Gait speed was remarkably stable throughout the 6MWT, which supports the validity of an abbreviated walk test such as 4MGS.

Enhanced calculation of eigen-stress field and elastic energy in atomistic interdiffusion of alloys

NASA Astrophysics Data System (ADS)

Cecilia, José M.; Hernández-Díaz, A. M.; Castrillo, Pedro; Jiménez-Alonso, J. F.

2017-02-01

The structural evolution of alloys is affected by the elastic energy associated to eigen-stress fields. However, efficient calculations of the elastic energy in evolving geometries are actually a great challenge in promising atomistic simulation techniques such as Kinetic Monte Carlo (KMC) methods. In this paper, we report two complementary algorithms to calculate the eigen-stress field by linear superposition (a.k.a. LSA, Lineal Superposition Algorithm) and the elastic energy modification in atomistic interdiffusion of alloys (the Atom Exchange Elastic Energy Evaluation (AE4) Algorithm). LSA is shown to be appropriated for fast incremental stress calculation in highly nanostructured materials, whereas AE4 provides the required input for KMC and, additionally, it can be used to evaluate the accuracy of the eigen-stress field calculated by LSA. Consequently, they are suitable to be used on-the-fly with KMC. Both algorithms are massively parallel by their definition and thus well-suited for their parallelization on modern Graphics Processing Units (GPUs). Our computational studies confirm that we can obtain significant improvements compared to conventional Finite Element Methods, and the utilization of GPUs opens up new possibilities for the development of these methods in atomistic simulation of materials.

Shor's quantum factoring algorithm on a photonic chip.

PubMed

Politi, Alberto; Matthews, Jonathan C F; O'Brien, Jeremy L

2009-09-04

Shor's quantum factoring algorithm finds the prime factors of a large number exponentially faster than any other known method, a task that lies at the heart of modern information security, particularly on the Internet. This algorithm requires a quantum computer, a device that harnesses the massive parallelism afforded by quantum superposition and entanglement of quantum bits (or qubits). We report the demonstration of a compiled version of Shor's algorithm on an integrated waveguide silica-on-silicon chip that guides four single-photon qubits through the computation to factor 15.

Surface properties and exponential stress relaxations of mammalian meibum films.

PubMed

Eftimov, Petar; Yokoi, Norihiko; Tonchev, Vesselin; Nencheva, Yana; Georgiev, Georgi As

2017-03-01

The surface properties of meibomian secretion (MGS), the major constituent of the tear film (TF) lipid layer, are of key importance for TF stability. The interfacial properties of canine, cMGS, and feline, fMGS, meibum films were studied using a Langmuir surface balance. These species were selected because they have blinking frequency and TF stability similar to those of humans. The sample's performance during dynamic area changes was evaluated by surface pressure (π)-area (A) isocycles and the layer structure was monitored with Brewster angle microscopy. The films' dilatational rheology was probed via the stress-relaxation technique. The animal MGS showed similar behavior both between each other and with human MGS (studied previously). They form reversible, non-collapsible, multilayer thick films. The relaxations of canine, feline, and human MGS films were well described by double exponential decay reflecting the presence of two processes: (1) fast elastic process, with characteristic time τ < 10 s and (2) slow viscous process, with τ > 100 s-emphasizing the meibum layers viscoelasticity. The temperature decrease from 35 to 25 °C resulted in decreased thickness and lateral expansion of all MGS layers accompanied with increase of the π/A hysteresis and of the elastic process contribution to π relaxation transients. Thus, MGS films of mammals with similar blinking frequency and TF stability have similar surface properties and stress relaxations unaltered by the interspecies MGS compositional variations. Such knowledge may impact the selection of animal mimics of human MGS and on a better understanding of lipid classes' impact on meibum functionality.

Isolation and characterization of a GS2 gene in melon (Cucumis melo L.) and its expression patterns under the fertilization of different forms of N.

PubMed

Deng, Yang-Wu; Zhang, Yi-Dong; Chen, Yi; Wang, Shu; Tang, Dong-Mei; Huang, Dan-Feng

2010-01-01

We isolated a novel glutamine synthetase (GS, EC 6.3.1.2) gene M-GS2 (accession: AY773090) by the RACE approach from melon. The full-length cDNA of M-GS2 is 1807 bp and contains a 1296 bp open reading frame (ORF) encoding 432 amino acids. The deduced protein contains conserved structural domains among plant GS2 proteins and shares extensive sequence homology with GS2 enzymes from other higher plants. M-GS2 expresses with specificity in leaf, and identification of a chloroplast transit peptide (cTP) in M-GS2 suggests that it localizes to the chloroplast. As shown by real-time quantitative PCR, distinct forms of nitrogen (N) found in fertilizers transcriptionally regulated M-GS2 differently. Ammonium and nitrate feeding only significantly regulated M-GS2 transcripts in leaf; starving (0.75 mM) or moderate (3.75 mM) N levels dramatically increased M-GS2 transcripts for 1 day, decreasing to a constant low level after 2-3 days, while sufficient N level (7.5 mM) had a minor effect throughout 3 days compared to controls. Glutamate feeding, however, not only significantly regulated M-GS2 transcripts in leaf (decreased initially then increased to higher levels than controls), but also in root, where it was up-regulated continuously. Our results suggested that M-GS2 is the first GS gene cloned and characterized in melon and melon responds to the variations in N fertilization by differentially expressing M-GS2.

Glycogen Synthase in Sertoli Cells: More Than Glycogenesis?

PubMed

Maldonado, Rodrigo; Mancilla, Héctor; Villarroel-Espíndola, Franz; Slebe, Felipe; Slebe, Juan Carlos; Méndez, Raúl; Guinovart, Joan J; Concha, Ilona I

2016-11-01

Sertoli cell metabolism actively maintains the nutritional needs of germ cells. It has been described that after glucose incorporation in Sertoli cells, less than 1% is converted to glycogen suggesting low levels of glycogen synthase activity. Phosphorylation of muscle glycogen synthase (MGS) at serine 640 (pS640MGS) decreases its activity, and this form of the enzyme was discovered as a non-ribosomal protein that modulates the translation of a subset of transcripts in HeLa cells. The aim of our study was to functionally characterize MGS in cultured Sertoli cells, as well as to explore this new feature related to RNA molecules. We detected MGS in the cytoplasm of Sertoli cells as well as in the nuclei. The activity rates of the enzyme were extremely low indicating that MGS is expressed but almost inactive. Protein targeting to glycogen (PTG) overexpression was performed to activate MGS by dephosphorylation. PTG induced glycogen synthesis massively, confirming that this enzyme is present but inactive. This finding correlates with high levels of pS640MGS, which were assayed by phosphatase treatment. To explore a putative new function for MGS in Sertoli cells, we performed RNA immunoprecipitation coupled to microarray studies. The results revealed that MGS co-immunoprecipitated with the several mRNAs and also rRNAs. These findings indicate that MGS is expressed Sertoli cells but in an inactive form, and also support a possibly novel feature of this metabolic enzyme associated with RNA-related molecules. J. Cell. Biochem. 117: 2597-2607, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Structure and Biochemical Activities of Escherichia coli MgsA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Page, Asher N.; George, Nicholas P.; Marceau, Aimee H.

2012-02-27

Bacterial 'maintenance of genome stability protein A' (MgsA) and related eukaryotic enzymes play important roles in cellular responses to stalled DNA replication processes. Sequence information identifies MgsA enzymes as members of the clamp loader clade of AAA{sup +} proteins, but structural information defining the family has been limited. Here, the x-ray crystal structure of Escherichia coli MgsA is described, revealing a homotetrameric arrangement for the protein that distinguishes it from other clamp loader clade AAA{sup +} proteins. Each MgsA protomer is composed of three elements as follows: ATP-binding and helical lid domains (conserved among AAA{sup +} proteins) and a tetramerizationmore » domain. Although the tetramerization domains bury the greatest amount of surface area in the MgsA oligomer, each of the domains participates in oligomerization to form a highly intertwined quaternary structure. Phosphate is bound at each AAA{sup +} ATP-binding site, but the active sites do not appear to be in a catalytically competent conformation due to displacement of Arg finger residues. E. coli MgsA is also shown to form a complex with the single-stranded DNA-binding protein through co-purification and biochemical studies. MgsA DNA-dependent ATPase activity is inhibited by single-stranded DNA-binding protein. Together, these structural and biochemical observations provide insights into the mechanisms of MgsA family AAA{sup +} proteins.« less

Structure and Biochemical Activities of Escherichia coli MgsA*♦

PubMed Central

Page, Asher N.; George, Nicholas P.; Marceau, Aimee H.; Cox, Michael M.; Keck, James L.

2011-01-01

Bacterial “maintenance of genome stability protein A” (MgsA) and related eukaryotic enzymes play important roles in cellular responses to stalled DNA replication processes. Sequence information identifies MgsA enzymes as members of the clamp loader clade of AAA+ proteins, but structural information defining the family has been limited. Here, the x-ray crystal structure of Escherichia coli MgsA is described, revealing a homotetrameric arrangement for the protein that distinguishes it from other clamp loader clade AAA+ proteins. Each MgsA protomer is composed of three elements as follows: ATP-binding and helical lid domains (conserved among AAA+ proteins) and a tetramerization domain. Although the tetramerization domains bury the greatest amount of surface area in the MgsA oligomer, each of the domains participates in oligomerization to form a highly intertwined quaternary structure. Phosphate is bound at each AAA+ ATP-binding site, but the active sites do not appear to be in a catalytically competent conformation due to displacement of Arg finger residues. E. coli MgsA is also shown to form a complex with the single-stranded DNA-binding protein through co-purification and biochemical studies. MgsA DNA-dependent ATPase activity is inhibited by single-stranded DNA-binding protein. Together, these structural and biochemical observations provide insights into the mechanisms of MgsA family AAA+ proteins. PMID:21297161

On sufficient statistics of least-squares superposition of vector sets.

PubMed

Konagurthu, Arun S; Kasarapu, Parthan; Allison, Lloyd; Collier, James H; Lesk, Arthur M

2015-06-01

The problem of superposition of two corresponding vector sets by minimizing their sum-of-squares error under orthogonal transformation is a fundamental task in many areas of science, notably structural molecular biology. This problem can be solved exactly using an algorithm whose time complexity grows linearly with the number of correspondences. This efficient solution has facilitated the widespread use of the superposition task, particularly in studies involving macromolecular structures. This article formally derives a set of sufficient statistics for the least-squares superposition problem. These statistics are additive. This permits a highly efficient (constant time) computation of superpositions (and sufficient statistics) of vector sets that are composed from its constituent vector sets under addition or deletion operation, where the sufficient statistics of the constituent sets are already known (that is, the constituent vector sets have been previously superposed). This results in a drastic improvement in the run time of the methods that commonly superpose vector sets under addition or deletion operations, where previously these operations were carried out ab initio (ignoring the sufficient statistics). We experimentally demonstrate the improvement our work offers in the context of protein structural alignment programs that assemble a reliable structural alignment from well-fitting (substructural) fragment pairs. A C++ library for this task is available online under an open-source license.

Classification of ligand molecules in PDB with graph match-based structural superposition.

PubMed

Shionyu-Mitsuyama, Clara; Hijikata, Atsushi; Tsuji, Toshiyuki; Shirai, Tsuyoshi

2016-12-01

The fast heuristic graph match algorithm for small molecules, COMPLIG, was improved by adding a structural superposition process to verify the atom-atom matching. The modified method was used to classify the small molecule ligands in the Protein Data Bank (PDB) by their three-dimensional structures, and 16,660 types of ligands in the PDB were classified into 7561 clusters. In contrast, a classification by a previous method (without structure superposition) generated 3371 clusters from the same ligand set. The characteristic feature in the current classification system is the increased number of singleton clusters, which contained only one ligand molecule in a cluster. Inspections of the singletons in the current classification system but not in the previous one implied that the major factors for the isolation were differences in chirality, cyclic conformations, separation of substructures, and bond length. Comparisons between current and previous classification systems revealed that the superposition-based classification was effective in clustering functionally related ligands, such as drugs targeted to specific biological processes, owing to the strictness of the atom-atom matching.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Devpura, S; Li, H; Liu, C

Purpose: To correlate dose distributions computed using six algorithms for recurrent early stage non-small cell lung cancer (NSCLC) patients treated with stereotactic body radiotherapy (SBRT), with outcome (local failure). Methods: Of 270 NSCLC patients treated with 12Gyx4, 20 were found to have local recurrence prior to the 2-year time point. These patients were originally planned with 1-D pencil beam (1-D PB) algorithm. 4D imaging was performed to manage tumor motion. Regions of local failures were determined from follow-up PET-CT scans. Follow-up CT images were rigidly fused to the planning CT (pCT), and recurrent tumor volumes (Vrecur) were mapped to themore » pCT. Dose was recomputed, retrospectively, using five algorithms: 3-D PB, collapsed cone convolution (CCC), anisotropic analytical algorithm (AAA), AcurosXB, and Monte Carlo (MC). Tumor control probability (TCP) was computed using the Marsden model (1,2). Patterns of failure were classified as central, in-field, marginal, and distant for Vrecur ≥95% of prescribed dose, 95–80%, 80–20%, and ≤20%, respectively (3). Results: Average PTV D95 (dose covering 95% of the PTV) for 3-D PB, CCC, AAA, AcurosXB, and MC relative to 1-D PB were 95.3±2.1%, 84.1±7.5%, 84.9±5.7%, 86.3±6.0%, and 85.1±7.0%, respectively. TCP values for 1-D PB, 3-D PB, CCC, AAA, AcurosXB, and MC were 98.5±1.2%, 95.7±3.0, 79.6±16.1%, 79.7±16.5%, 81.1±17.5%, and 78.1±20%, respectively. Patterns of local failures were similar for 1-D and 3D PB plans, which predicted that the majority of failures occur in centraldistal regions, with only ∼15% occurring distantly. However, with convolution/superposition and MC type algorithms, the majority of failures (65%) were predicted to be distant, consistent with the literature. Conclusion: Based on MC and convolution/superposition type algorithms, average PTV D95 and TCP were ∼15% lower than the planned 1-D PB dose calculation. Patterns of failure results suggest that MC and convolution/superposition type algorithms predict different outcomes for patterns of failure relative to PB algorithms. Work supported in part by Varian Medical Systems, Palo Alto, CA.« less

Grading of meningeal solitary fibrous tumors/hemangiopericytomas: analysis of the prognostic value of the Marseille Grading System in a cohort of 132 patients.

PubMed

Macagno, Nicolas; Vogels, Rob; Appay, Romain; Colin, Carole; Mokhtari, Karima; Küsters, Benno; Wesseling, Pieter; Figarella-Branger, Dominique; Flucke, Uta; Bouvier, Corinne

2018-03-30

The finding that meningeal solitary fibrous tumors (SFTs) and meningeal hemangiopericytomas (HPCs) are both characterized by NAB2-STAT6 gene fusion has pushed their inclusion in the WHO 2016 Classification of tumors of the central nervous system (CNS) as different manifestations of the same entity. Given that the clinical behavior of the CNS SFT/HPC spectrum ranges from benign to malignant, it is presently unclear whether the grading criteria are still adequate. Here, we present the results of a study that analyzed the prognostic value of an updated version of the Marseille Grading System (MGS) in a retrospectively assembled cohort of 132 primary meningeal SFTs/HPCs with nuclear overexpression of STAT6. The median patient follow-up was 64 months (range 4-274 months); 73 cases (55%) were MGS I, 50 cases (38%) MGS II and 9 cases (7%) were MGS III. Progression-free survival (PFS) and disease-specific survival (DSS) were investigated using univariate analysis: the prognostic factors for PFS included MGS, extent of surgery, radiotherapy, chemotherapy and mitotic activity ≥5/10 high-power field (HPF). Moreover, MGS, radiotherapy, mitotic activity ≥5/10 HPF, and necrosis were the prognostic factors measured for DSS. In multivariate analysis, extent of surgery, mitotic activity ≥5/10 HPF, MGS I and MGS III were the independent prognostic factors measured for PFS while necrosis, MGS III and radiotherapy were the independent prognostic factors for DSS. In conclusion, our results show that assessing the malignancy risk of SFT/HPC should not rely on one single criterion like mitotic activity. Therefore, MGS is useful as it combines the value of different criteria. In particular, the combination of a high mitotic activity and necrosis (MGS III) indicates a particularly poor prognosis. © 2018 International Society of Neuropathology.

Stochastic multi-objective model for optimal energy exchange optimization of networked microgrids with presence of renewable generation under risk-based strategies.

PubMed

Gazijahani, Farhad Samadi; Ravadanegh, Sajad Najafi; Salehi, Javad

2018-02-01

The inherent volatility and unpredictable nature of renewable generations and load demand pose considerable challenges for energy exchange optimization of microgrids (MG). To address these challenges, this paper proposes a new risk-based multi-objective energy exchange optimization for networked MGs from economic and reliability standpoints under load consumption and renewable power generation uncertainties. In so doing, three various risk-based strategies are distinguished by using conditional value at risk (CVaR) approach. The proposed model is specified as a two-distinct objective function. The first function minimizes the operation and maintenance costs, cost of power transaction between upstream network and MGs as well as power loss cost, whereas the second function minimizes the energy not supplied (ENS) value. Furthermore, the stochastic scenario-based approach is incorporated into the approach in order to handle the uncertainty. Also, Kantorovich distance scenario reduction method has been implemented to reduce the computational burden. Finally, non-dominated sorting genetic algorithm (NSGAII) is applied to minimize the objective functions simultaneously and the best solution is extracted by fuzzy satisfying method with respect to risk-based strategies. To indicate the performance of the proposed model, it is performed on the modified IEEE 33-bus distribution system and the obtained results show that the presented approach can be considered as an efficient tool for optimal energy exchange optimization of MGs. Copyright © 2017 ISA. Published by Elsevier Ltd. All rights reserved.

The Post-polyketide Synthase Steps in iso-Migrastatin Biosynthesis Featuring Tailoring Enzymes with Broad Substrate Specificity

PubMed Central

Ma, Ming; Kwong, Thomas; Lim, Si-Kyu; Ju, Jianhua; Lohman, Jeremy R.; Shen, Ben

2013-01-01

The iso-migrastatin (iso-MGS) biosynthetic gene cluster from Streptomyces platensis NRRL 18993 consists of 11 genes, featuring an acyltransferase (AT)-less type I polyketide synthase (PKS) and three tailoring enzymes MgsIJK. Systematic inactivation of mgsIJK in S. platensis enabled us to (i) identify two nascent products (10 and 13) of the iso-MGS AT-less type I PKS, establishing an unprecedented novel feature for AT-less type I PKSs, and (ii) account for the formation of all known post-PKS biosynthetic intermediates (10-17) generated by the three tailoring enzymes MgsIJK, which possessed significant substrate promiscuities. PMID:23394593

Robot Behavior Acquisition Superposition and Composting of Behaviors Learned through Teleoperation

NASA Technical Reports Server (NTRS)

Peters, Richard Alan, II

2004-01-01

Superposition of a small set of behaviors, learned via teleoperation, can lead to robust completion of a simple articulated reach-and-grasp task. Results support the hypothesis that a set of learned behaviors can be combined to generate new behaviors of a similar type. This supports the hypothesis that a robot can learn to interact purposefully with its environment through a developmental acquisition of sensory-motor coordination. Teleoperation bootstraps the process by enabling the robot to observe its own sensory responses to actions that lead to specific outcomes. A reach-and-grasp task, learned by an articulated robot through a small number of teleoperated trials, can be performed autonomously with success in the face of significant variations in the environment and perturbations of the goal. Superpositioning was performed using the Verbs and Adverbs algorithm that was developed originally for the graphical animation of articulated characters. Work was performed on Robonaut at NASA-JSC.

A Simple Encryption Algorithm for Quantum Color Image

NASA Astrophysics Data System (ADS)

Li, Panchi; Zhao, Ya

2017-06-01

In this paper, a simple encryption scheme for quantum color image is proposed. Firstly, a color image is transformed into a quantum superposition state by employing NEQR (novel enhanced quantum representation), where the R,G,B values of every pixel in a 24-bit RGB true color image are represented by 24 single-qubit basic states, and each value has 8 qubits. Then, these 24 qubits are respectively transformed from a basic state into a balanced superposition state by employed the controlled rotation gates. At this time, the gray-scale values of R, G, B of every pixel are in a balanced superposition of 224 multi-qubits basic states. After measuring, the whole image is an uniform white noise, which does not provide any information. Decryption is the reverse process of encryption. The experimental results on the classical computer show that the proposed encryption scheme has better security.

Drosophila model of Meier-Gorlin syndrome based on the mutation in a conserved C-Terminal domain of Orc6.

PubMed

Balasov, Maxim; Akhmetova, Katarina; Chesnokov, Igor

2015-11-01

Meier-Gorlin syndrome (MGS) is an autosomal recessive disorder characterized by microtia, primordial dwarfism, small ears, and skeletal abnormalities. Patients with MGS often carry mutations in the genes encoding the components of the pre-replicative complex such as Origin Recognition Complex (ORC) subunits Orc1, Orc4, Orc6, and helicase loaders Cdt1 and Cdc6. Orc6 is an important component of ORC and has functions in both DNA replication and cytokinesis. Mutation in conserved C-terminal motif of Orc6 associated with MGS impedes the interaction of Orc6 with core ORC. In order to study the effects of MGS mutation in an animal model system we introduced MGS mutation in Orc6 and established Drosophila model of MGS. Mutant flies die at third instar larval stage with abnormal chromosomes and DNA replication defects. The lethality can be rescued by elevated expression of mutant Orc6 protein. Rescued MGS flies are unable to fly and display multiple planar cell polarity defects. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.

A Circuit-Based Quantum Algorithm Driven by Transverse Fields for Grover's Problem

NASA Technical Reports Server (NTRS)

Jiang, Zhang; Rieffel, Eleanor G.; Wang, Zhihui

2017-01-01

We designed a quantum search algorithm, giving the same quadratic speedup achieved by Grover's original algorithm; we replace Grover's diffusion operator (hard to implement) with a product diffusion operator generated by transverse fields (easy to implement). In our algorithm, the problem Hamiltonian (oracle) and the transverse fields are applied to the system alternatively. We construct such a sequence that the corresponding unitary generates a closed transition between the initial state (even superposition of all states) and a modified target state, which has a high degree of overlap with the original target state.

Development of alternative wood-post MGS approach guardrail transition.

DOT National Transportation Integrated Search

2011-11-28

The objective of this study was to develop a wood-post MGS approach transition system that is equivalent to the : simplified steel-post, MGS stiffness transition recently developed at the Midwest Roadside Safety Facility. An extensive : literature re...

Iso-migrastatin Titer Improvement in the Engineered Streptomyces lividans SB11002 Strain by Optimization of Fermentation Conditions

PubMed Central

Wu, Xueyun; Yang, Dong; Zhu, Xiangcheng; Feng, Zhiyang; Lv, Zhengbin; Zhang, Yaozhou; Shen, Ben; Xu, Zhinan

2011-01-01

The heterologous production of iso-migrastatin (iso-MGS) was successfully demonstrated in an engineered S. lividans SB11002 strain, which was derived from S. lividans K4–114, following introduction of pBS11001, which harbored the entire mgs biosynthetic gene cluster. However, under similar fermentation conditions, the iso-MGS titer in the engineered strain was significantly lower than that in the native producer - Streptomyces platensis NRRL 18993. To circumvent the problem of low iso-MGS titers and to expand the utility of this heterologous system for iso-MGS biosynthesis and engineering, systematic optimization of the fermentation medium was carried out. The effects of major components in the cultivation medium, including carbon, organic and inorganic nitrogen sources, were investigated using a single factor optimization method. As a result, sucrose and yeast extract were determined to be the best carbon and organic nitrogen sources, resulting in optimized iso-MGS production. Conversely, all other inorganic nitrogen sources evaluated produced various levels of inhibition of iso-MGS production. The final optimized R2YE production medium produced iso-MGS with a titer of 86.5 mg/L, about 3.6-fold higher than that in the original R2YE medium, and 1.5 fold higher than that found within the native S. platensis NRRL 18993 producer. PMID:21625393

Statistical properties of superimposed stationary spike trains.

PubMed

Deger, Moritz; Helias, Moritz; Boucsein, Clemens; Rotter, Stefan

2012-06-01

The Poisson process is an often employed model for the activity of neuronal populations. It is known, though, that superpositions of realistic, non- Poisson spike trains are not in general Poisson processes, not even for large numbers of superimposed processes. Here we construct superimposed spike trains from intracellular in vivo recordings from rat neocortex neurons and compare their statistics to specific point process models. The constructed superimposed spike trains reveal strong deviations from the Poisson model. We find that superpositions of model spike trains that take the effective refractoriness of the neurons into account yield a much better description. A minimal model of this kind is the Poisson process with dead-time (PPD). For this process, and for superpositions thereof, we obtain analytical expressions for some second-order statistical quantities-like the count variability, inter-spike interval (ISI) variability and ISI correlations-and demonstrate the match with the in vivo data. We conclude that effective refractoriness is the key property that shapes the statistical properties of the superposition spike trains. We present new, efficient algorithms to generate superpositions of PPDs and of gamma processes that can be used to provide more realistic background input in simulations of networks of spiking neurons. Using these generators, we show in simulations that neurons which receive superimposed spike trains as input are highly sensitive for the statistical effects induced by neuronal refractoriness.

A review on quantum search algorithms

NASA Astrophysics Data System (ADS)

Giri, Pulak Ranjan; Korepin, Vladimir E.

2017-12-01

The use of superposition of states in quantum computation, known as quantum parallelism, has significant advantage in terms of speed over the classical computation. It is evident from the early invented quantum algorithms such as Deutsch's algorithm, Deutsch-Jozsa algorithm and its variation as Bernstein-Vazirani algorithm, Simon algorithm, Shor's algorithms, etc. Quantum parallelism also significantly speeds up the database search algorithm, which is important in computer science because it comes as a subroutine in many important algorithms. Quantum database search of Grover achieves the task of finding the target element in an unsorted database in a time quadratically faster than the classical computer. We review Grover's quantum search algorithms for a singe and multiple target elements in a database. The partial search algorithm of Grover and Radhakrishnan and its optimization by Korepin called GRK algorithm are also discussed.

Validation and Inter-Comparison of Limb Sounding Profiles from MRO/MCS and MGS/TES

NASA Astrophysics Data System (ADS)

Shirley, J. H.; McConnochie, T. M.; Kass, D. M.; Kleinböhl, A.; Schofield, J. T.; Heavens, N. G.; McCleese, D. J.; Benson, J.; Hinson, D. P.; Bandfield, J. L.

2014-07-01

Nighttime atmospheric temperatures in northern middle latitudes during Mars' aphelion season obtained by MGS/TES and MRO/MCS are compared with MGS radio science results. Profile mean Δ Ts of <= 2 K demonstrate consistency of retrieved temperatures.

Serum Magnesium and Related Factors in Long-Term Renal Transplant Recipients: An Observational Study.

PubMed

Rodrigues, N; Santana, A; Guerra, J; Neves, M; Nascimento, C; Gonçalves, J; da Costa, A G

2017-05-01

Low serum magnesium (MgS) is a known risk factor for cardiovascular and mineral bone disease. In renal transplant recipients (RTRs), low MgS levels have been related to higher glomerular filtration rates (GFR) and with calcineurin inhibitors, particularly tacrolimus. We aimed to evaluate MgS in renal transplant recipients with over 1 year of follow-up to establish related risk factors and the impact of the use of cyclosporine versus tacrolimus. Cross-sectional study of 94 RTRs with more than 12 months of follow-up. Hypomagnesemia was defined as serum magnesium level <1.5 mg/dL. Hypomagnesemia was found in 5.3% of patients. MgS showed a negative correlation with creatinine clearance. A positive correlation between MgS with urinary magnesium and phosphorus was found. Cyclosporine versus tacrolimus analysis did not show a significant difference regarding MgS when considering all the population and the subgroup of patients with GFR >45 mL/min/1.73 m 2 . On the subgroup with GFR <45 mL/min/1.73 m 2 , those on tacrolimus had lower MgS than those on cyclosporine, but those same patients presented with significantly different GFR, higher in the tacrolimus subgroup. Hypomagnesemia has a low prevalence in RTRs with more than 1 year of follow-up. MgS levels evidenced a strong correlation with GFR. A significant difference on MgS levels between patients on tacrolimus and cyclosporine was found only when considering GFR <45 mL/min/1.73 m 2 , in which patients on tacrolimus had significantly higher GFR than patients on cyclosporine, which may explain these results. Copyright © 2017 Elsevier Inc. All rights reserved.

Binary rare earth element-Ni/Co metallic glasses with distinct β-relaxation behaviors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Z. G.; Wang, Z.; Wang, W. H., E-mail: whw@iphy.ac.cn

2015-10-21

We report the formation of a series of rare earth element (RE)-Ni/Co binary metallic glasses (MGs) with unusual distinct β-relaxation peak compared with that of most of the reported MGs which usually exhibit as an excess wing or a shoulder. The β-relaxation behavior of RE-Ni/Co MGs is sensitive to the composition and the atomic radii of the RE and can be tuned through changing the fraction of RE-Ni (or Co) atomic pairs. The novel RE-Ni/Co MGs with distinct β-relaxation can serve as model system to investigate the nature of the β-relaxation as well as its relations with other physical andmore » mechanical properties of MGs.« less

Atomistic origin of size effects in fatigue behavior of metallic glasses

NASA Astrophysics Data System (ADS)

Sha, Zhendong; Wong, Wei Hin; Pei, Qingxiang; Branicio, Paulo Sergio; Liu, Zishun; Wang, Tiejun; Guo, Tianfu; Gao, Huajian

2017-07-01

While many experiments and simulations on metallic glasses (MGs) have focused on their tensile ductility under monotonic loading, the fatigue mechanisms of MGs under cyclic loading still remain largely elusive. Here we perform molecular dynamics (MD) and finite element simulations of tension-compression fatigue tests in MGs to elucidate their fatigue mechanisms with focus on the sample size effect. Shear band (SB) thickening is found to be the inherent fatigue mechanism for nanoscale MGs. The difference in fatigue mechanisms between macroscopic and nanoscale MGs originates from whether the SB forms partially or fully through the cross-section of the specimen. Furthermore, a qualitative investigation of the sample size effect suggests that small sample size increases the fatigue life while large sample size promotes cyclic softening and necking. Our observations on the size-dependent fatigue behavior can be rationalized by the Gurson model and the concept of surface tension of the nanovoids. The present study sheds light on the fatigue mechanisms of MGs and can be useful in interpreting previous experimental results.

Ethylene-vinyl acetate foam as a new lung substitute in radiotherapy.

PubMed

Marqués, Enrique; Mancha, Pedro J

2018-04-01

The purpose of this study was to evaluate ethylene-vinyl acetate (EVA) foam as a new lung substitute in radiotherapy and to study its physical and dosimetric characteristics. We calculated the ideal vinyl acetate (VA) content of EVA foam sheets to mimic the physical and dosimetric characteristics of the ICRU lung tissue. We also computed the water-to-medium mass collision stopping power ratios, mass attenuation coefficients, CT numbers, effective atomic numbers and electron densities for: ICRU lung tissue, the RANDO commercial phantom, scaled WATER and EVA foam sheets with varying VA contents in a range between the minimum and maximum values supplied by the manufacturer. For all these substitutes, we simulated percent depth-dose curves with EGSnrc Monte Carlo (MC PDDs) in a water-lung substitute-water slab phantom expressed as dose-to-medium and dose-to-water for 3 × 3- and 10 × 10-cm 2 field sizes. PDD for the 10 × 10-cm 2 field size was also calculated with the MultiGrid Superposition algorithm (MGS PDD) for a relative electron density to water ratio of 0.26. The latter was compared with the MC PDDs in dose-to-water for scaled WATER and EVA foam sheets with the VA content that was most similar to the calculated ideal content that is physically achievable in practice. We calculated an ideal VA content of 55%; however, the maximum physically achievable content with current manufacturing techniques is 40%. The physical characteristics of the EVA foam sheets with a VA content of 40% (EVA40) are very close to those of the ICRU lung reference. The physical densities of the EVA40 foam sheets ranged from 0.030 to 0.965 g/cm 3 , almost covering the entire physical density range of the inflated/deflated lung (0.260-1.050 g/cm 3 ). Its mass attenuation coefficient at the effective energy of a 6-MV photon beam agrees within 0.8% of the ICRU reference value, and its CT number agrees within 6 HU. The effective atomic number for EVA40 varies by less than 0.42 of the ICRU value, and its effective electron density is within 0.9%. PDDs expressed in dose-to-medium and dose-to-water agree with the ICRU curve within 2% in all regions. PDDs calculated with both MC and MGS were within 1.5%. The EVA40 is an excellent cork-like lung substitute for radiotherapy applications. From a sole material used in footwear, it is possible to obtain a lung substitute that mimics the physical and dosimetric characteristics of ICRU lung tissue even better than the RANDO commercial phantom. © 2018 American Association of Physicists in Medicine.

Determination of the maximum MGS mounting height : phase II detailed analysis with LS-DYNA.

DOT National Transportation Integrated Search

2012-12-01

Determination of the maximum Midwest Guardrail System (MGS) mounting height was performed in two phases. : Phase I concentrated on crash testing: two full-scale crash tests were performed on the MGS with top-rail mounting heights : of 34 in. (864 mm)...

Plasticity of ductile metallic glasses: a self-organized critical state.

PubMed

Sun, B A; Yu, H B; Jiao, W; Bai, H Y; Zhao, D Q; Wang, W H

2010-07-16

We report a close correlation between the dynamic behavior of serrated flow and the plasticity in metallic glasses (MGs) and show that the plastic deformation of ductile MGs can evolve into a self-organized critical state characterized by the power-law distribution of shear avalanches. A stick-slip model considering the interaction of multiple shear bands is presented to reveal complex scale-free intermittent shear-band motions in ductile MGs and quantitatively reproduce the experimental observations. Our studies have implications for understanding the precise plastic deformation mechanism of MGs.

The kinetic origin of delayed yielding in metallic glasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ye, Y. F.; Liu, X. D.; Wang, S.

2016-06-20

Recent experiments showed that irreversible structural change or plasticity could occur in metallic glasses (MGs) even within the apparent elastic limit after a sufficiently long waiting time. To explain this phenomenon, a stochastic shear transformation model is developed based on a unified rate theory to predict delayed yielding in MGs, which is validated afterwards through extensive atomistic simulations carried out on different MGs. On a fundamental level, an analytic framework is established in this work that links time, stress, and temperature altogether into a general yielding criterion for MGs.

Surface Chemistry Interactions of Cationorm with Films by Human Meibum and Tear Film Compounds

PubMed Central

Georgiev, Georgi As.; Yokoi, Norihiko; Nencheva, Yana; Peev, Nikola; Daull, Philippe

2017-01-01

Cationorm® (CN) cationic nanoemulsion was demonstrated to enhance tear film (TF) stability in vivo possibly via effects on tear film lipid layer (TFLL). Therefore the interactions of CN with human meibum (MGS) and TFLL in vitro and in vivo deserve special study. MGS and CN were spread at the air/water interface of a Langmuir surface balance to ensure a range of MGS/CN oil phase ratios: 20/1, 10/1, 5/1, 3/1, 2/1 and 1/1. The films capability to reorganize during dynamic area changes was evaluated via the surface pressure-area compression isotherms and step/relaxation dilatational rheology studies. Films structure was monitored with Brewster angle microscopy. CN/TFLL interactions at the ocular surface were monitored with non-contact specular microscopy. The in vitro studies of MGS/CN layers showed that (i) CN inclusion (at fixed MGS content) increased film elasticity and thickness and that (ii) CN can compensate for moderate meibum deficiency in MGS/CN films. In vivo CN mixed with TFLL in a manner similar to CN/MGS interactions in vitro, and resulted in enhanced thickness of TFLL. In vitro and in vivo data complement each other and facilitated the study of the composition-structure-function relationship that determines the impact of cationic nanoemulsions on TF. PMID:28718823

Strengthening and toughening metallic glasses: The elastic perspectives and opportunities

NASA Astrophysics Data System (ADS)

Liu, Z. Q.; Zhang, Z. F.

2014-04-01

There exist general conflicts between strength and toughness in crystalline engineering materials, and various strengthening and toughening strategies have been developed from the dislocation motion perspectives. Metallic glasses (MGs) have demonstrated great potentials owing to their unique properties; however, their structural applications are strictly limited. One of the key problems is that the traditional strengthening and toughening strategies and mechanisms are not applicable in MGs due to the absence of dislocations and crystalline microstructures. Here, we show that the strength and toughness, or equivalently the shear modulus and Poisson's ratio, are invariably mutually exclusive in MGs. Accordingly, the MGs can be categorized into four groups with different levels of integrated mechanical properties. It is further revealed that the conflicts originate fundamentally from the atomic bonding structures and the levels of strength-toughness combinations are indeed dominated by the bulk modulus. Moreover, we propose novel strategies for optimizing the mechanical properties of MGs from the elastic perspectives. We emphasize the significance of developing high bulk modulus MGs to achieve simultaneously both high strength and good toughness and highlight the elastic opportunities for strengthening and toughening materials.

Two models of minimalist, incremental syntactic analysis.

PubMed

Stabler, Edward P

2013-07-01

Minimalist grammars (MGs) and multiple context-free grammars (MCFGs) are weakly equivalent in the sense that they define the same languages, a large mildly context-sensitive class that properly includes context-free languages. But in addition, for each MG, there is an MCFG which is strongly equivalent in the sense that it defines the same language with isomorphic derivations. However, the structure-building rules of MGs but not MCFGs are defined in a way that generalizes across categories. Consequently, MGs can be exponentially more succinct than their MCFG equivalents, and this difference shows in parsing models too. An incremental, top-down beam parser for MGs is defined here, sound and complete for all MGs, and hence also capable of parsing all MCFG languages. But since the parser represents its grammar transparently, the relative succinctness of MGs is again evident. Although the determinants of MG structure are narrowly and discretely defined, probabilistic influences from a much broader domain can influence even the earliest analytic steps, allowing frequency and context effects to come early and from almost anywhere, as expected in incremental models. Copyright © 2013 Cognitive Science Society, Inc.

Methylglyoxal synthase regulates cell elongation via alterations of cellular methylglyoxal and spermidine content in Bacillus subtilis.

PubMed

Shin, Sang-Min; Song, Sung-Hyun; Lee, Jin-Woo; Kwak, Min-Kyu; Kang, Sa-Ouk

2017-10-01

Methylglyoxal regulates cell division and differentiation through its interaction with polyamines. Loss of their biosynthesizing enzyme causes physiological impairment and cell elongation in eukaryotes. However, the reciprocal effects of methylglyoxal and polyamine production and its regulatory metabolic switches on morphological changes in prokaryotes have not been addressed. Here, Bacillus subtilis methylglyoxal synthase (mgsA) and polyamine biosynthesizing genes encoding arginine decarboxylase (SpeA), agmatinase (SpeB), and spermidine synthase (SpeE), were disrupted or overexpressed. Treatment of 0.2mM methylglyoxal and 1mM spermidine led to the elongation and shortening of B. subtilis wild-type cells to 12.38±3.21μm (P<0.05) and 3.24±0.73μm (P<0.01), respectively, compared to untreated cells (5.72±0.68μm). mgsA-deficient (mgsA - ) and -overexpressing (mgsA OE ) mutants also demonstrated cell shortening and elongation, similar to speB- and speE-deficient (speB - and speE - ) and -overexpressing (speB OE and speE OE ) mutants. Importantly, both mgsA-depleted speB OE and speE OE mutants (speB OE /mgsA - and speE OE /mgsA - ) were drastically shortened to 24.5% and 23.8% of parental speB OE and speE OE mutants, respectively. These phenotypes were associated with reciprocal alterations of mgsA and polyamine transcripts governed by the contents of methylglyoxal and spermidine, which are involved in enzymatic or genetic metabolite-control mechanisms. Additionally, biophysically detected methylglyoxal-spermidine Schiff bases did not affect morphogenesis. Taken together, the findings indicate that methylglyoxal triggers cell elongation. Furthermore, cells with methylglyoxal accumulation commonly exhibit an elongated rod-shaped morphology through upregulation of mgsA, polyamine genes, and the global regulator spx, as well as repression of the cell division and shape regulator, FtsZ. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Nine-Step Minnesota Grading System for Eyebank Eyes With Age Related Macular Degeneration: A Systematic Approach to Study Disease Stages.

PubMed

Olsen, Timothy W; Liao, Albert; Robinson, Hershonna S; Palejwala, Neal V; Sprehe, Nicholas

2017-10-01

To refine the Minnesota Grading System (MGS) using definitions from the Age-Related Eye Disease Studies (AREDS) into a nine-step grading scale (MGS-9). A nine-step grading scale descriptive analysis using three key phenotypic features (total drusen area, increased, and decreased pigmentation) of human eyebank eyes that were graded according to definitions from the AREDS criteria in order to harmonize studies of disease progression for research involving human tissue. From 2005 through February 2017, we have analyzed 1159 human eyes, procured from two eyebanks. Each macula was imaged using high-resolution, stereoscopic color fundus photography with both direct- and transillumination. Fundus images were digitally overlaid with a grading template and triangulated for foveal centration. We documented and stratified risk for each globe by applying the AREDS nine-step grading scale to the key clinical features from the MGS-9. We found a good distribution within the MGS categories (1-9) with few level eight globes. Eyes were processed within 12.1 ± 6.3, hours from the time of death through imaging, dissection, and freezing or fixation. Applying the MGS-9 to 331 pairs (662 eyes were simultaneously graded), 84% were within one-grading step and 93% within two steps of the fellow eye. We also document reticular pseudodrusen, basal laminar drusen, and pattern dystrophy. The MGS nine-step grading scale enables researchers using human tissue to refine the risk assessment of donor tissue. This analysis will harmonize results among researchers when grading human tissue using MGS criteria. Most importantly, the MGS-9 links directly to the known risk for progression from the AREDS.

A Critical Review on Metallic Glasses as Structural Materials for Cardiovascular Stent Applications.

PubMed

Jafary-Zadeh, Mehdi; Praveen Kumar, Gideon; Branicio, Paulo Sergio; Seifi, Mohsen; Lewandowski, John J; Cui, Fangsen

2018-02-27

Functional and mechanical properties of novel biomaterials must be carefully evaluated to guarantee long-term biocompatibility and structural integrity of implantable medical devices. Owing to the combination of metallic bonding and amorphous structure, metallic glasses (MGs) exhibit extraordinary properties superior to conventional crystalline metallic alloys, placing them at the frontier of biomaterials research. MGs have potential to improve corrosion resistance, biocompatibility, strength, and longevity of biomedical implants, and hence are promising materials for cardiovascular stent applications. Nevertheless, while functional properties and biocompatibility of MGs have been widely investigated and validated, a solid understanding of their mechanical performance during different stages in stent applications is still scarce. In this review, we provide a brief, yet comprehensive account on the general aspects of MGs regarding their formation, processing, structure, mechanical, and chemical properties. More specifically, we focus on the additive manufacturing (AM) of MGs, their outstanding high strength and resilience, and their fatigue properties. The interconnection between processing, structure and mechanical behaviour of MGs is highlighted. We further review the main categories of cardiovascular stents, the required mechanical properties of each category, and the conventional materials have been using to address these requirements. Then, we bridge between the mechanical requirements of stents, structural properties of MGs, and the corresponding stent design caveats. In particular, we discuss our recent findings on the feasibility of using MGs in self-expandable stents where our results show that a metallic glass based aortic stent can be crimped without mechanical failure. We further justify the safe deployment of this stent in human descending aorta. It is our intent with this review to inspire biodevice developers toward the realization of MG-based stents.

A Critical Review on Metallic Glasses as Structural Materials for Cardiovascular Stent Applications

PubMed Central

Jafary-Zadeh, Mehdi; Praveen Kumar, Gideon

2018-01-01

Functional and mechanical properties of novel biomaterials must be carefully evaluated to guarantee long-term biocompatibility and structural integrity of implantable medical devices. Owing to the combination of metallic bonding and amorphous structure, metallic glasses (MGs) exhibit extraordinary properties superior to conventional crystalline metallic alloys, placing them at the frontier of biomaterials research. MGs have potential to improve corrosion resistance, biocompatibility, strength, and longevity of biomedical implants, and hence are promising materials for cardiovascular stent applications. Nevertheless, while functional properties and biocompatibility of MGs have been widely investigated and validated, a solid understanding of their mechanical performance during different stages in stent applications is still scarce. In this review, we provide a brief, yet comprehensive account on the general aspects of MGs regarding their formation, processing, structure, mechanical, and chemical properties. More specifically, we focus on the additive manufacturing (AM) of MGs, their outstanding high strength and resilience, and their fatigue properties. The interconnection between processing, structure and mechanical behaviour of MGs is highlighted. We further review the main categories of cardiovascular stents, the required mechanical properties of each category, and the conventional materials have been using to address these requirements. Then, we bridge between the mechanical requirements of stents, structural properties of MGs, and the corresponding stent design caveats. In particular, we discuss our recent findings on the feasibility of using MGs in self-expandable stents where our results show that a metallic glass based aortic stent can be crimped without mechanical failure. We further justify the safe deployment of this stent in human descending aorta. It is our intent with this review to inspire biodevice developers toward the realization of MG-based stents. PMID:29495521

The selective metabotropic glutamate 2/3 receptor agonist MGS0028 reverses psychomotor abnormalities and recognition memory deficits in mice lacking the pituitary adenylate cyclase-activating polypeptide.

PubMed

Ago, Yukio; Hiramatsu, Naoki; Ishihama, Toshihiro; Hazama, Keisuke; Hayata-Takano, Atsuko; Shibasaki, Yasuhiro; Shintani, Norihito; Hashimoto, Hitoshi; Kawasaki, Toshiyuki; Onoe, Hirotaka; Chaki, Shigeyuki; Nakazato, Atsuro; Baba, Akemichi; Takuma, Kazuhiro; Matsuda, Toshio

2013-02-01

Previous studies suggest that metabotropic glutamate 2/3 receptors are involved in psychiatric disorders. In this study, we examined the effects of the selective metabotropic glutamate 2/3 (mGlu2/3) receptor agonist MGS0028 on behavioral abnormalities in mice lacking the pituitary adenylate cyclase-activating polypeptide (PACAP), an experimental model of psychiatric disorders such as schizophrenia and attention-deficit/hyperactivity disorder. We found that PACAP-deficient mice showed impairments in the novel object recognition test and these impairments were improved by MGS0028 (0.1 mg/kg). Similarly, MGS0028 improved hyperactivity and jumping behaviors, but did not reverse increased immobility times in the forced swim test in PACAP-deficient mice. These results suggest that MGS0028 may be a potential, novel treatment for psychiatric disorders.

Strengthening and toughening metallic glasses: The elastic perspectives and opportunities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Z. Q.; Zhang, Z. F., E-mail: zhfzhang@imr.ac.cn

2014-04-28

There exist general conflicts between strength and toughness in crystalline engineering materials, and various strengthening and toughening strategies have been developed from the dislocation motion perspectives. Metallic glasses (MGs) have demonstrated great potentials owing to their unique properties; however, their structural applications are strictly limited. One of the key problems is that the traditional strengthening and toughening strategies and mechanisms are not applicable in MGs due to the absence of dislocations and crystalline microstructures. Here, we show that the strength and toughness, or equivalently the shear modulus and Poisson's ratio, are invariably mutually exclusive in MGs. Accordingly, the MGs canmore » be categorized into four groups with different levels of integrated mechanical properties. It is further revealed that the conflicts originate fundamentally from the atomic bonding structures and the levels of strength-toughness combinations are indeed dominated by the bulk modulus. Moreover, we propose novel strategies for optimizing the mechanical properties of MGs from the elastic perspectives. We emphasize the significance of developing high bulk modulus MGs to achieve simultaneously both high strength and good toughness and highlight the elastic opportunities for strengthening and toughening materials.« less

The Age-Related Macular Degeneration Complex: Linking Epidemiology and Histopathology Using the Minnesota Grading System (The Inaugural Frederick C. Blodi Lecture).

PubMed

Olsen, Timothy W; Bottini, Alexander R; Mendoza, Pia; Grossniklausk, Hans E

2015-09-01

To describe the histopathologic findings of the four stages of age-related macular degeneration (AMD) as defined by the Age-Related Eye Disease Study (AREDS) using the Minnesota grading system (MGS). There are no animal models for AMD. Eye banks enable access to human tissue with AMD. The level of AMD (grades 1 through 4) as defined by AREDS is determined ex vivo using the MGS. The AREDS has the largest collection to date of prospectively gathered data on the natural history of AMD. Since the MGS uses the same clinical criteria as AREDS, the addition of histopathologic findings of graded tissue confirms important pathophysiology at each stage of AMD. Four eye bank eyes were graded according to the MGS. Only the right eyes were dissected for phenotype grading. The fellow (left) eyes were fixed for histopathologic study. The eyes were serially sectioned (7 μm) through the macula. Individual slides were examined, and a two-dimensional reconstruction of the topography of the macula was created for each donor. Selected, unstained slides were used for immunohistochemical staining. In one donor, portions of tissue were obtained for transmission electron microscopic (TEM) processing. Donor 1 had a rare hard, nodular druse (MGS1). Donor 2 had intermediate confluent drusen (MGS2). Donor 3 had numerous intermediate drusen (MGS3) in the right eye. Histopathology of the fellow left showed basal laminar deposits (BLamD), soft drusen, and an area of occult choroidal neovascularization underlying the retinal pigment epithelium (RPE) with endothelial cells (CD31-positive). Donor 4 also had MGS 3 along with reticular pseudodrusen (RPD). Histologic and TEM examination demonstrated diffuse BLamD, thickening of Bruch's membrane, hard drusen, and focal nodules underlying the RPE that corresponded to the RPD. EM examination demonstrated both BLamD and electron-dense material located just external to the elastic layer of Bruch's membrane. Eye bank eyes graded using the MGS serve as an important link to the phenotypic and epidemiologic data from the AREDS. Thus, the MGS serves as a system to study the histopathology at each stage of AMD to better understand the relevant pathophysiologic changes in disease progression.

The Age-Related Macular Degeneration Complex: Linking Epidemiology and Histopathology Using the Minnesota Grading System (The Inaugural Frederick C. Blodi Lecture)

PubMed Central

Olsen, Timothy W.; Bottini, Alexander R.; Mendoza, Pia; Grossniklausk, Hans E.

2015-01-01

Purpose To describe the histopathologic findings of the four stages of age-related macular degeneration (AMD) as defined by the Age-Related Eye Disease Study (AREDS) using the Minnesota grading system (MGS). Clinical Relevance There are no animal models for AMD. Eye banks enable access to human tissue with AMD. The level of AMD (grades 1 through 4) as defined by AREDS is determined ex vivo using the MGS. The AREDS has the largest collection to date of prospectively gathered data on the natural history of AMD. Since the MGS uses the same clinical criteria as AREDS, the addition of histopathologic findings of graded tissue confirms important pathophysiology at each stage of AMD. Methods Four eye bank eyes were graded according to the MGS. Only the right eyes were dissected for phenotype grading. The fellow (left) eyes were fixed for histopathologic study. The eyes were serially sectioned (7 μm) through the macula. Individual slides were examined, and a two-dimensional reconstruction of the topography of the macula was created for each donor. Selected, unstained slides were used for immunohistochemical staining. In one donor, portions of tissue were obtained for transmission electron microscopic (TEM) processing. Results Donor 1 had a rare hard, nodular druse (MGS1). Donor 2 had intermediate confluent drusen (MGS2). Donor 3 had numerous intermediate drusen (MGS3) in the right eye. Histopathology of the fellow left showed basal laminar deposits (BLamD), soft drusen, and an area of occult choroidal neovascularization underlying the retinal pigment epithelium (RPE) with endothelial cells (CD31-positive). Donor 4 also had MGS 3 along with reticular pseudodrusen (RPD). Histologic and TEM examination demonstrated diffuse BLamD, thickening of Bruch’s membrane, hard drusen, and focal nodules underlying the RPE that corresponded to the RPD. EM examination demonstrated both BLamD and electron-dense material located just external to the elastic layer of Bruch’s membrane. Conclusion Eye bank eyes graded using the MGS serve as an important link to the phenotypic and epidemiologic data from the AREDS. Thus, the MGS serves as a system to study the histopathology at each stage of AMD to better understand the relevant pathophysiologic changes in disease progression. PMID:27895380

The dosimetric effects of tissue heterogeneities in intensity-modulated radiation therapy (IMRT) of the head and neck

NASA Astrophysics Data System (ADS)

Al-Hallaq, H. A.; Reft, C. S.; Roeske, J. C.

2006-03-01

The dosimetric effects of bone and air heterogeneities in head and neck IMRT treatments were quantified. An anthropomorphic RANDO phantom was CT-scanned with 16 thermoluminescent dosimeter (TLD) chips placed in and around the target volume. A standard IMRT plan generated with CORVUS was used to irradiate the phantom five times. On average, measured dose was 5.1% higher than calculated dose. Measurements were higher by 7.1% near the heterogeneities and by 2.6% in tissue. The dose difference between measurement and calculation was outside the 95% measurement confidence interval for six TLDs. Using CORVUS' heterogeneity correction algorithm, the average difference between measured and calculated doses decreased by 1.8% near the heterogeneities and by 0.7% in tissue. Furthermore, dose differences lying outside the 95% confidence interval were eliminated for five of the six TLDs. TLD doses recalculated by Pinnacle3's convolution/superposition algorithm were consistently higher than CORVUS doses, a trend that matched our measured results. These results indicate that the dosimetric effects of air cavities are larger than those of bone heterogeneities, thereby leading to a higher delivered dose compared to CORVUS calculations. More sophisticated algorithms such as convolution/superposition or Monte Carlo should be used for accurate tailoring of IMRT dose in head and neck tumours.

A robust adaptive load frequency control for micro-grids.

PubMed

Khooban, Mohammad-Hassan; Niknam, Taher; Blaabjerg, Frede; Davari, Pooya; Dragicevic, Tomislav

2016-11-01

The goal of this study is to introduce a novel robust load frequency control (LFC) strategy for micro-grid(s) (MG(s)) in islanded mode operation. Admittedly, power generators in MG(s) cannot supply steady electric power output and sometimes cause unbalance between supply and demand. Battery energy storage system (BESS) is one of the effective solutions to these problems. Due to the high cost of the BESS, a new idea of Vehicle-to-Grid (V2G) is that a battery of Electric-Vehicle (EV) can be applied as a tantamount large-scale BESS in MG(s). As a result, a new robust control strategy for an islanded micro-grid (MG) is introduced that can consider electric vehicles׳ (EV(s)) effect. Moreover, in this paper, a new combination of the General Type II Fuzzy Logic Sets (GT2FLS) and the Modified Harmony Search Algorithm (MHSA) technique is applied for adaptive tuning of proportional-integral (PI) controller. Implementing General Type II Fuzzy Systems is computationally expensive. However, using a recently introduced α-plane representation, GT2FLS can be seen as a composition of several Interval Type II Fuzzy Logic Systems (IT2FLS) with a corresponding level of α for each. Real-data from an offshore wind farm in Sweden and solar radiation data in Aberdeen (United Kingdom) was used in order to examine the performance of the proposed novel controller. A comparison is made between the achieved results of Optimal Fuzzy-PI (OFPI) controller and those of Optimal Interval Type II Fuzzy-PI (IT2FPI) controller, which are of most recent advances in the area at hand. The Simulation results prove the successfulness and effectiveness of the proposed controller. Copyright © 2016 ISA. Published by Elsevier Ltd. All rights reserved.

Efficient implementation of the 3D-DDA ray traversal algorithm on GPU and its application in radiation dose calculation.

PubMed

Xiao, Kai; Chen, Danny Z; Hu, X Sharon; Zhou, Bo

2012-12-01

The three-dimensional digital differential analyzer (3D-DDA) algorithm is a widely used ray traversal method, which is also at the core of many convolution∕superposition (C∕S) dose calculation approaches. However, porting existing C∕S dose calculation methods onto graphics processing unit (GPU) has brought challenges to retaining the efficiency of this algorithm. In particular, straightforward implementation of the original 3D-DDA algorithm inflicts a lot of branch divergence which conflicts with the GPU programming model and leads to suboptimal performance. In this paper, an efficient GPU implementation of the 3D-DDA algorithm is proposed, which effectively reduces such branch divergence and improves performance of the C∕S dose calculation programs running on GPU. The main idea of the proposed method is to convert a number of conditional statements in the original 3D-DDA algorithm into a set of simple operations (e.g., arithmetic, comparison, and logic) which are better supported by the GPU architecture. To verify and demonstrate the performance improvement, this ray traversal method was integrated into a GPU-based collapsed cone convolution∕superposition (CCCS) dose calculation program. The proposed method has been tested using a water phantom and various clinical cases on an NVIDIA GTX570 GPU. The CCCS dose calculation program based on the efficient 3D-DDA ray traversal implementation runs 1.42 ∼ 2.67× faster than the one based on the original 3D-DDA implementation, without losing any accuracy. The results show that the proposed method can effectively reduce branch divergence in the original 3D-DDA ray traversal algorithm and improve the performance of the CCCS program running on GPU. Considering the wide utilization of the 3D-DDA algorithm, various applications can benefit from this implementation method.

The Cognitive Toolkit of Programming--Algorithmic Abstraction, Decomposition-Superposition

ERIC Educational Resources Information Center

Szlávi,Péter; Zsakó, László

2017-01-01

As a programmer when solving a problem, a number of conscious and unconscious cognitive operations are being performed. Problem-solving is a gradual and cyclic activity; as the mind is adjusting the problem to its schemas formed by its previous experiences, the programmer gets closer and closer to understanding and defining the problem. The…

Ab initio crystal structure prediction of magnesium (poly)sulfides and calculation of their NMR parameters.

PubMed

Mali, Gregor

2017-03-01

Ab initio prediction of sensible crystal structures can be regarded as a crucial task in the quickly-developing methodology of NMR crystallography. In this contribution, an evolutionary algorithm was used for the prediction of magnesium (poly)sulfide crystal structures with various compositions. The employed approach successfully identified all three experimentally detected forms of MgS, i.e. the stable rocksalt form and the metastable wurtzite and zincblende forms. Among magnesium polysulfides with a higher content of sulfur, the most probable structure with the lowest formation energy was found to be MgS 2 , exhibiting a modified rocksalt structure, in which S 2- anions were replaced by S 2 2- dianions. Magnesium polysulfides with even larger fractions of sulfur were not predicted to be stable. For the lowest-energy structures, 25 Mg quadrupolar coupling constants and chemical shift parameters were calculated using the density functional theory approach. The calculated NMR parameters could be well rationalized by the symmetries of the local magnesium environments, by the coordination of magnesium cations and by the nature of the surrounding anions. In the future, these parameters could serve as a reference for the experimentally determined 25 Mg NMR parameters of magnesium sulfide species.

Algorithms of walking and stability for an anthropomorphic robot

NASA Astrophysics Data System (ADS)

Sirazetdinov, R. T.; Devaev, V. M.; Nikitina, D. V.; Fadeev, A. Y.; Kamalov, A. R.

2017-09-01

Autonomous movement of an anthropomorphic robot is considered as a superposition of a set of typical elements of movement - so-called patterns, each of which can be considered as an agent of some multi-agent system [ 1 ]. To control the AP-601 robot, an information and communication infrastructure has been created that represents some multi-agent system that allows the development of algorithms for individual patterns of moving and run them in the system as a set of independently executed and interacting agents. The algorithms of lateral movement of the anthropomorphic robot AP-601 series with active stability due to the stability pattern are presented.

Assessment of Mars Atmospheric Temperature Retrievals from the Thermal Emission Spectrometer Radiances

NASA Technical Reports Server (NTRS)

Hoffman, Matthew J.; Eluszkiewicz, Janusz; Weisenstein, Deborah; Uymin, Gennady; Moncet, Jean-Luc

2012-01-01

Motivated by the needs of Mars data assimilation. particularly quantification of measurement errors and generation of averaging kernels. we have evaluated atmospheric temperature retrievals from Mars Global Surveyor (MGS) Thermal Emission Spectrometer (TES) radiances. Multiple sets of retrievals have been considered in this study; (1) retrievals available from the Planetary Data System (PDS), (2) retrievals based on variants of the retrieval algorithm used to generate the PDS retrievals, and (3) retrievals produced using the Mars 1-Dimensional Retrieval (M1R) algorithm based on the Optimal Spectral Sampling (OSS ) forward model. The retrieved temperature profiles are compared to the MGS Radio Science (RS) temperature profiles. For the samples tested, the M1R temperature profiles can be made to agree within 2 K with the RS temperature profiles, but only after tuning the prior and error statistics. Use of a global prior that does not take into account the seasonal dependence leads errors of up 6 K. In polar samples. errors relative to the RS temperature profiles are even larger. In these samples, the PDS temperature profiles also exhibit a poor fit with RS temperatures. This fit is worse than reported in previous studies, indicating that the lack of fit is due to a bias correction to TES radiances implemented after 2004. To explain the differences between the PDS and Ml R temperatures, the algorithms are compared directly, with the OSS forward model inserted into the PDS algorithm. Factors such as the filtering parameter, the use of linear versus nonlinear constrained inversion, and the choice of the forward model, are found to contribute heavily to the differences in the temperature profiles retrieved in the polar regions, resulting in uncertainties of up to 6 K. Even outside the poles, changes in the a priori statistics result in different profile shapes which all fit the radiances within the specified error. The importance of the a priori statistics prevents reliable global retrievals based a single a priori and strongly implies that a robust science analysis must instead rely on retrievals employing localized a priori information, for example from an ensemble based data assimilation system such as the Local Ensemble Transform Kalman Filter (LETKF).

Elasticity dominates strength and failure in metallic glasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Z. Q.; Qu, R. T.; Zhang, Z. F., E-mail: zhfzhang@imr.ac.cn

2015-01-07

Two distinct deformation mechanisms of shearing and volume dilatation are quantitatively analyzed in metallic glasses (MGs) from the fundamental thermodynamics. Their competition is deduced to intrinsically dominate the strength and failure behaviors of MGs. Both the intrinsic shear and normal strengths give rise to the critical mechanical energies to activate destabilization of amorphous structures, under pure shearing and volume dilatation, respectively, and can be determined in terms of elastic constants. By adopting an ellipse failure criterion, the strength and failure behaviors of MGs can be precisely described just according to their shear modulus and Poisson's ratio without mechanical testing. Quantitativemore » relations are established systematically and verified by experimental results. Accordingly, the real-sense non-destructive failure prediction can be achieved in various MGs. By highlighting the broad key significance of elasticity, a “composition-elasticity-property” scheme is further outlined for better understanding and controlling the mechanical properties of MGs and other glassy materials from the elastic perspectives.« less

Declines in arrestin and rhodopsin in the macula with progression of age-related macular degeneration.

PubMed

Ethen, Cheryl M; Feng, Xiao; Olsen, Timothy W; Ferrington, Deborah A

2005-03-01

Biochemical analysis of age-related macular degeneration (AMD) at distinct stages of the disease will help further understanding of the molecular events associated with disease progression. This study was conducted to determine the ability of a new grading system for eye bank eyes, the Minnesota Grading System (MGS), to discern distinct stages of AMD so that retinal region-specific changes in rod photoreceptor protein expression from donors could be determined. Donor eyes were assigned to a specific level of AMD by using the MGS. Expression of the rod photoreceptor proteins rhodopsin and arrestin was evaluated by Western immunoblot analysis in the macular and peripheral regions of the neurosensory retina from donors at different stages of AMD. A significant linear decline in both arrestin and rhodopsin content correlated with progressive MGS levels in the macula. In contrast, the peripheral region showed no significant correlation between MGS level and the content of either protein. The statistically significant relationship between decreasing macular rod photoreceptor proteins and progressive MGS levels of AMD demonstrates the utility of the clinically based MGS to correspond with specific protein changes found at known, progressive stages of degeneration. Future biochemical analysis of clinically characterized donor eyes will further understanding of the pathobiochemistry of AMD.

Gravity Field Mapping of Mars with MGS

NASA Technical Reports Server (NTRS)

Smith, David E.; Zuber, Maria T.; Lemoine, Frank G.

1998-01-01

Tracking of the MGS spacecraft in orbit at Mars by the Deep Space Network since last September has provided doppler and range measurements that are being used to improve the model of the Mars gravity field. During most of October 1997, April 1998, and June thru August 1998 high quality tracking data were obtained while the periapse was in the northern hemisphere at altitudes in the 170 to 190 km range. The eccentric orbit had a period of about 11.5 hrs and an inclination of about 96.2 degrees so that low altitude tracking was obtained over most of the northern hemisphere, including the north polar icecap. Data from the earlier Mariner 9 and Viking missions have been added to the MGS data and a series of experimental gravity models developed from the combined datasets. These models have generally been of degree and order 70 and are a significant improvement over earlier models that did not include the MGS data. Gravity anomalies over the north polar cap region of Mars are generally less than 50 to 100 mgals and show no obvious correlation with the topography. Successive MGS orbits derived using these new models are showing agreement at the 100 meter level, and this has been confirmed with the laser altimeter (MOLA) on MGS These comparisons are expected to improve significantly as more tracking data get included in the solution and the MGS orbit becomes more circular giving a more balanced geographical distribution of data at low altitude. This will happen early in 1999 as the orbit approaches the mapping configuration of a circular orbit at about 400 Km.

Renal-protective effects of n-hexane layer from morning glory seeds ethanol extract.

PubMed

Shao, Yanli; Park, Bongkyun; Song, Yoon-Jae; Park, Dae Won; Sohn, Eun-Hwa; Kang, Se Chan

2017-11-01

Nephrotoxicity is a main problem in cancer patients using cisplatin. Oxidative stress, inflammation and apoptosis are the important mechanisms of cisplatin induced nephrotoxicity. In the present study, we investigated the effect of the extracts of morning glory on nephrotoxicity by cisplatin in human embryonic kidney cells 293 (HEK-293) and mice. Previous studies have reported that morning glory extracts showed potent activity on anti-inflammatory and anti-oxidant. However, the protective effects of the n-hexane layer of morning glory seed (MGs-Hx) on nephrotoxicity and its mechanisms have not been clearly understood. Oral administration with MGs-Hx showed protective effects in vivo experiments test and the treatment of MGs-Hx in a concentration of 100mg/kg/day had significant effect both of decreasing serum creatinine, BUN, serum uric acid level and reduced iNOS, COX-2 mRNA expressions with low side-effect. Moreover, cell viability was restored by MGs-Hx treatment compared to cisplatin-induced nephrotoxic HEK-293 cells. Co-treatment with MGs-Hx and cisplatin showed the significant effect to reduce inflammatory enzyme, iNOS expression and continuous production of NO. In addition, it exhibited a tendency to decreasing expression of apoptosis-related proteins, caspase-3, 8 and 9, and NF-κB translocation to nucleus as well as phosphorylation of p38, JNK, ERK in cisplatin-induced nephrotoxic HEK-293 cells. Our study provides insight into the underlying mechanisms of MGs-Hx and suggests that MGs-Hx might be a potential therapeutic agent to modulate inflammation and apoptosis in nephrotoxicity. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Stereotactic body radiotherapy for primary lung cancer at a dose of 50 Gy total in five fractions to the periphery of the planning target volume calculated using a superposition algorithm.

PubMed

Takeda, Atsuya; Sanuki, Naoko; Kunieda, Etsuo; Ohashi, Toshio; Oku, Yohei; Takeda, Toshiaki; Shigematsu, Naoyuki; Kubo, Atsushi

2009-02-01

To retrospectively analyze the clinical outcomes of stereotactic body radiotherapy (SBRT) for patients with Stages 1A and 1B non-small-cell lung cancer. We reviewed the records of patients with non-small-cell lung cancer treated with curative intent between Dec 2001 and May 2007. All patients had histopathologically or cytologically confirmed disease, increased levels of tumor markers, and/or positive findings on fluorodeoxyglucose positron emission tomography. Staging studies identified their disease as Stage 1A or 1B. Performance status was 2 or less according to World Health Organization guidelines in all cases. The prescribed dose of 50 Gy total in five fractions, calculated by using a superposition algorithm, was defined for the periphery of the planning target volume. One hundred twenty-one patients underwent SBRT during the study period, and 63 were eligible for this analysis. Thirty-eight patients had Stage 1A (T1N0M0) and 25 had Stage 1B (T2N0M0). Forty-nine patients were not appropriate candidates for surgery because of chronic pulmonary disease. Median follow-up of these 49 patients was 31 months (range, 10-72 months). The 3-year local control, disease-free, and overall survival rates in patients with Stages 1A and 1B were 93% and 96% (p = 0.86), 76% and 77% (p = 0.83), and 90% and 63% (p = 0.09), respectively. No acute toxicity was observed. Grade 2 or higher radiation pneumonitis was experienced by 3 patients, and 1 of them had fatal bacterial pneumonia. The SBRT at 50 Gy total in five fractions to the periphery of the planning target volume calculated by using a superposition algorithm is feasible. High local control rates were achieved for both T2 and T1 tumors.

An Improved Method of Heterogeneity Compensation for the Convolution / Superposition Algorithm

NASA Astrophysics Data System (ADS)

Jacques, Robert; McNutt, Todd

2014-03-01

Purpose: To improve the accuracy of convolution/superposition (C/S) in heterogeneous material by developing a new algorithm: heterogeneity compensated superposition (HCS). Methods: C/S has proven to be a good estimator of the dose deposited in a homogeneous volume. However, near heterogeneities electron disequilibrium occurs, leading to the faster fall-off and re-buildup of dose. We propose to filter the actual patient density in a position and direction sensitive manner, allowing the dose deposited near interfaces to be increased or decreased relative to C/S. We implemented the effective density function as a multivariate first-order recursive filter and incorporated it into GPU-accelerated, multi-energetic C/S implementation. We compared HCS against C/S using the ICCR 2000 Monte-Carlo accuracy benchmark, 23 similar accuracy benchmarks and 5 patient cases. Results: Multi-energetic HCS increased the dosimetric accuracy for the vast majority of voxels; in many cases near Monte-Carlo results were achieved. We defined the per-voxel error, %|mm, as the minimum of the distance to agreement in mm and the dosimetric percentage error relative to the maximum MC dose. HCS improved the average mean error by 0.79 %|mm for the patient volumes; reducing the average mean error from 1.93 %|mm to 1.14 %|mm. Very low densities (i.e. < 0.1 g / cm3) remained problematic, but may be solvable with a better filter function. Conclusions: HCS improved upon C/S's density scaled heterogeneity correction with a position and direction sensitive density filter. This method significantly improved the accuracy of the GPU based algorithm reaching the accuracy levels of Monte Carlo based methods with performance in a few tenths of seconds per beam. Acknowledgement: Funding for this research was provided by the NSF Cooperative Agreement EEC9731748, Elekta / IMPAC Medical Systems, Inc. and the Johns Hopkins University. James Satterthwaite provided the Monte Carlo benchmark simulations.

GPU-accelerated Monte Carlo convolution/superposition implementation for dose calculation.

PubMed

Zhou, Bo; Yu, Cedric X; Chen, Danny Z; Hu, X Sharon

2010-11-01

Dose calculation is a key component in radiation treatment planning systems. Its performance and accuracy are crucial to the quality of treatment plans as emerging advanced radiation therapy technologies are exerting ever tighter constraints on dose calculation. A common practice is to choose either a deterministic method such as the convolution/superposition (CS) method for speed or a Monte Carlo (MC) method for accuracy. The goal of this work is to boost the performance of a hybrid Monte Carlo convolution/superposition (MCCS) method by devising a graphics processing unit (GPU) implementation so as to make the method practical for day-to-day usage. Although the MCCS algorithm combines the merits of MC fluence generation and CS fluence transport, it is still not fast enough to be used as a day-to-day planning tool. To alleviate the speed issue of MC algorithms, the authors adopted MCCS as their target method and implemented a GPU-based version. In order to fully utilize the GPU computing power, the MCCS algorithm is modified to match the GPU hardware architecture. The performance of the authors' GPU-based implementation on an Nvidia GTX260 card is compared to a multithreaded software implementation on a quad-core system. A speedup in the range of 6.7-11.4x is observed for the clinical cases used. The less than 2% statistical fluctuation also indicates that the accuracy of the authors' GPU-based implementation is in good agreement with the results from the quad-core CPU implementation. This work shows that GPU is a feasible and cost-efficient solution compared to other alternatives such as using cluster machines or field-programmable gate arrays for satisfying the increasing demands on computation speed and accuracy of dose calculation. But there are also inherent limitations of using GPU for accelerating MC-type applications, which are also analyzed in detail in this article.

Revealing flow behaviors of metallic glass based on activation of flow units

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ge, T. P.; Wang, W. H.; Bai, H. Y., E-mail: hybai@iphy.ac.cn

2016-05-28

Atomic level flow plays a critical role in the mechanical behavior of metallic glass (MG) while the connection between the flow and the heterogeneous microstructure of the glass remains unclear. We describe the heterogeneity of MGs as the elastic matrix with “inclusions” of nano-scale liquid-like flow units, and the plastic flow behavior of MGs is considered to be accommodated by the flow units. We show that the model can explain the various deformation behaviors, the transformation from inhomogeneous deformation to homogeneous flow upon strain rate or temperature, and the deformation map in MGs, which might provide insights into the flowmore » mechanisms in glasses and inspiration for improving the plasticity of MGs.« less

Morning Glory Syndrome with Carotid and Middle Cerebral Artery Vasculopathy.

PubMed

Nezzar, Hachemi; Mbekeani, Joyce N; Dalens, Helen

2015-12-01

To report a case of incidental asymptomatic atypical morning glory syndrome (MGS) with concomitant ipsilateral carotid and middle cerebral dysgenesis. A 6-year-old child was discovered to have incidental findings of MGS, with atypia. All visual functions were normal including vision and stereopsis. Neuroimaging revealed ipsilateral carotid and middle cerebral vascular narrowing without associated collateral vessels or cerebral ischemia commonly seen in Moyamoya disease. Subsequent annual examinations have been stable, without signs of progression. This case demonstrates disparity between structural aberrations and final visual and neurological function and reinforces the association between MGS and intracranial vascular disruption. Full ancillary ophthalmic and neuroimaging studies should be performed in all patients with MGS with interval reassessments, even when the patient is asymptomatic and functionally intact.

Description of texts of auxiliary programs for processing video information. Part 2: SUODH program of automated separation of quasihomogeneous formations

NASA Technical Reports Server (NTRS)

Borisenko, V. I.; Chesalin, L. S.

1980-01-01

The algorithm, block diagram, complete text, and instructions are given for the use of a computer program to separate formations whose spectral characteristics are constant on the average. The initial material for operating the computer program presented is video information in a standard color-superposition format.

An Overview of the Topography of Mars from the Mars Orbiter Laser Altimeter (MOLA)

NASA Technical Reports Server (NTRS)

Smith, David E.; Zuber, Maria T.

2000-01-01

The Mars Global Surveyor (MGS) spacecraft has now completed more than half of its one-Mars-year mission to globally map Mars. During the MGS elliptical and circular orbit mapping phases, the Mars Orbiter Laser Altimeter (MOLA), an instrument on the MGS payload, has collected over 300 million precise elevation measurements. MOLA measures the range from the MGS spacecraft to the Martian surface and to atmospheric reflections. Range is converted to topography through knowledge of the MGS spacecraft orbit. Ranges from MOLA have resulted in a precise global topographic map of Mars. The instrument has also provided measurements of the width of the backscattered optical pulse and of the 1064 nm reflectivity of the Martian surface and atmosphere. The range resolution of the MOLA instrument is 37.5 cm and the along-track resolution of MOLA ground shots is approx. 300 m; the across-track spacing depends on latitude and time in the mapping orbit. The best current topographic grid has a spatial resolution of approx. 1/16 deg and vertical accuracy of approx. one meter. Additional information is contained in the original extended abstract.

Active impulsive noise control using maximum correntropy with adaptive kernel size

NASA Astrophysics Data System (ADS)

Lu, Lu; Zhao, Haiquan

2017-03-01

The active noise control (ANC) based on the principle of superposition is an attractive method to attenuate the noise signals. However, the impulsive noise in the ANC systems will degrade the performance of the controller. In this paper, a filtered-x recursive maximum correntropy (FxRMC) algorithm is proposed based on the maximum correntropy criterion (MCC) to reduce the effect of outliers. The proposed FxRMC algorithm does not requires any priori information of the noise characteristics and outperforms the filtered-x least mean square (FxLMS) algorithm for impulsive noise. Meanwhile, in order to adjust the kernel size of FxRMC algorithm online, a recursive approach is proposed through taking into account the past estimates of error signals over a sliding window. Simulation and experimental results in the context of active impulsive noise control demonstrate that the proposed algorithms achieve much better performance than the existing algorithms in various noise environments.

An efficient quantum algorithm for spectral estimation

NASA Astrophysics Data System (ADS)

Steffens, Adrian; Rebentrost, Patrick; Marvian, Iman; Eisert, Jens; Lloyd, Seth

2017-03-01

We develop an efficient quantum implementation of an important signal processing algorithm for line spectral estimation: the matrix pencil method, which determines the frequencies and damping factors of signals consisting of finite sums of exponentially damped sinusoids. Our algorithm provides a quantum speedup in a natural regime where the sampling rate is much higher than the number of sinusoid components. Along the way, we develop techniques that are expected to be useful for other quantum algorithms as well—consecutive phase estimations to efficiently make products of asymmetric low rank matrices classically accessible and an alternative method to efficiently exponentiate non-Hermitian matrices. Our algorithm features an efficient quantum-classical division of labor: the time-critical steps are implemented in quantum superposition, while an interjacent step, requiring much fewer parameters, can operate classically. We show that frequencies and damping factors can be obtained in time logarithmic in the number of sampling points, exponentially faster than known classical algorithms.

Contact stresses in gear teeth: A new method of analysis

NASA Technical Reports Server (NTRS)

Somprakit, Paisan; Huston, Ronald L.; Oswald, Fred B.

1991-01-01

A new, innovative procedure called point load superposition for determining the contact stresses in mating gear teeth. It is believed that this procedure will greatly extend both the range of applicability and the accuracy of gear contact stress analysis. Point load superposition is based upon fundamental solutions from the theory of elasticity. It is an iterative numerical procedure which has distinct advantages over the classical Hertz method, the finite element method, and over existing applications with the boundary element method. Specifically, friction and sliding effects, which are either excluded from or difficult to study with the classical methods, are routinely handled with the new procedure. Presented here are the basic theory and the algorithms. Several examples are given. Results are consistent with those of the classical theories. Applications to spur gears are discussed.

Elastic properties and atomic bonding character in metallic glasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rouxel, T., E-mail: tanguy.rouxel@univ-rennes1.fr; Yokoyama, Y.

2015-07-28

The elastic properties of glasses from different metallic systems were studied in the light of the atomic packing density and bonding character. We found that the electronegativity mismatch (Δe{sup −}) between the host- and the major solute-elements provides a plausible explanation to the large variation observed for Poisson's ratio (ν) among metallic glasses (MGs) (from 0.28 for Fe-based to 0.43 for Pd-based MGs), notwithstanding a similar atomic packing efficiency (C{sub g}). Besides, it is found that ductile MGs correspond to Δe{sup −} smaller than 0.5 and to a relatively steep atomic potential well. Ductility is, thus, favored in MGs exhibitingmore » a weak bond directionality on average and opposing a strong resistance to volume change.« less

Correlation between average melting temperature and glass transition temperature in metallic glasses

NASA Astrophysics Data System (ADS)

Lu, Zhibin; Li, Jiangong

2009-02-01

The correlation between average melting temperature (⟨Tm⟩) and glass transition temperature (Tg) in metallic glasses (MGs) is analyzed. A linear relationship, Tg=0.385⟨Tm⟩, is observed. This correlation agrees with Egami's suggestion [Rep. Prog. Phys. 47, 1601 (1984)]. The prediction of Tg from ⟨Tm⟩ through the relationship Tg=0.385⟨Tm⟩ has been tested using experimental data obtained on a large number of MGs. This relationship can be used to predict and design MGs with a desired Tg.

Compositional origin of unusual β-relaxation properties in La-Ni-Al metallic glasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhu, Z. G.; Li, Y. Z.; Wang, Z.

2014-08-28

The β-relaxation of metallic glasses (MGs) bears nontrivial connections to their microscopic and macroscopic properties. In an effort to elucidate the mechanism of the β-relaxation, we studied by dynamical mechanical measurements the change of its properties on varying the composition of La{sub 60}Ni{sub 15}Al{sub 25} in various ways. The properties of the β-relaxation turn out to be very sensitive to the composition. It is found that the isochronal loss peak temperature of β-relaxation, T{sub β,peak}, is effectively determined by the total (La + Ni) content. When Cu is added into the alloy to replace either La, Ni, or Al, themore » T{sub β,peak} increases with decrease of the (La + Ni) content. The trend is in accordance with data of binary and ternary MGs formed from La, Ni, Al, and Cu. Binary La-Ni MGs have pronounced β-relaxation loss peaks, well separated from the α-relaxation. In contrast, the β-relaxation is not resolved in La-Al and La-Cu MGs, showing up as an excess wing. For the ternary La-Ni-Al MGs, increase of La or Ni content is crucial to lower the T{sub β,peak}. Keeping the Al content fixed, increase of La content lowers the T{sub β,peak} further, indicating the more important role La plays in lowering T{sub β,peak} than Ni. The observed effects on changing the composition of La{sub 60}Ni{sub 15}Al{sub 25} lead to the conclusion that the properties of the β-relaxation are mainly determined by the interaction between the largest solvent element, La, and the smallest element, Ni. From our data, it is further deduced that La and Ni have high mobility in the MGs, and this explains why the β-relaxation in this La-based MGs is prominent and well resolved from the α-relaxation as opposed to Pd- and Zr-based MGs where the solvent and largest atoms, Pd and Zr, are the least mobile.« less

Generating functional analysis of minority games with inner product strategy definitions

NASA Astrophysics Data System (ADS)

Coolen, A. C. C.; Shayeghi, N.

2008-08-01

We use generating functional methods to solve the so-called inner product versions of the minority game (MG), with fake and/or real market histories, by generalizing the theory developed recently for look-up table MGs with real histories. The phase diagrams of the look-up table and inner product MG versions are generally found to be identical, with the exception of inner product MGs where histories are sampled linearly, which are found to be structurally critical. However, we encounter interesting differences both in the theory (where the role of the history frequency distribution in look-up table MGs is taken over by the eigenvalue spectrum of a history covariance matrix in inner product MGs) and in the static and dynamic phenomenology of the models. Our theoretical predictions are supported by numerical simulations.

Comparison of Anti-Obesity Effect between Two Types of Syrup Containing Rare Sugars in Wistar Rats.

PubMed

Ochiai, Masaru; Misaki, Kohei; Yamada, Takako; Iida, Tetsuo; Okuma, Kazuhiro; Matsuo, Tatsuhiro

2017-01-01

D-Allulose-containing rare sugar sweeteners have been categorized into two types, rare sugar syrup (RSS), consisting of 4 rare monosaccharides, and modified glucose syrup (MGS), rich in D-allulose, which was previously referred to D-psicose. The anti-obesity effect of RSS and D-allulose has been already clarified, but that of rare monosaccharides other than D-allulose in RSS has not yet been well understood. Here, we investigated and compared the anti-obesity effect of RSS and MGS in rats. Male Wistar rats were divided into 4 dietary groups: a high-sucrose control diet group (S), a high-fructose corn syrup diet group (HFCS), an RSS diet group (RSS), and an MGS diet group (MGS). RSS significantly suppressed abdominal adipose tissue weight and total body fat accumulation in comparison to sucrose. On the other hand, MGS reduced body weight gain, but not abdominal fat accumulation, relative to sucrose. The weight of the liver and kidneys was significantly higher in the RSS and MGS groups than in the S and HFCS groups, but serum biochemical parameters and hepatic lipids contents were not significantly different among the groups. The present study shows that two types of D-allulose-containing rare sugar sweeteners can suppress body fat accumulation or weight gain in a different manner and that RSS could be used as more effective sweeteners in place of sucrose and HFCS to maintain healthy body weight.

Fast generation of computer-generated holograms using wavelet shrinkage.

PubMed

Shimobaba, Tomoyoshi; Ito, Tomoyoshi

2017-01-09

Computer-generated holograms (CGHs) are generated by superimposing complex amplitudes emitted from a number of object points. However, this superposition process remains very time-consuming even when using the latest computers. We propose a fast calculation algorithm for CGHs that uses a wavelet shrinkage method, eliminating small wavelet coefficient values to express approximated complex amplitudes using only a few representative wavelet coefficients.

Analysis of ECs and related compounds in plasma: artifactual isomerization and ex vivo enzymatic generation of 2-MGs.

PubMed

Pastor, Antoni; Farré, Magí; Fitó, Montserrat; Fernandez-Aranda, Fernando; de la Torre, Rafael

2014-05-01

The analysis of peripheral endocannabinoids (ECs) is a good biomarker of the EC system. Their concentrations, from clinical studies, strongly depend on sample collection and time processing conditions taking place in clinical and laboratory settings. The analysis of 2-monoacylglycerols (MGs) (i.e., 2-arachidonoylglycerol or 2-oleoylglycerol) is a particularly challenging issue because of their ex vivo formation and chemical isomerization that occur after blood sample collection. We provide evidence that their ex vivo formation can be minimized by adding Orlistat, an enzymatic lipase inhibitor, to plasma. Taking into consideration the low cost of Orlistat, we recommend its addition to plasma collecting tubes while maintaining sample cold chain until storage. We have validated a method for the determination of the EC profile of a range of MGs and N-acylethanolamides in plasma that preserves the original isomer ratio of MGs. Nevertheless, the chemical isomerization of 2-MGs can only be avoided by an immediate processing and analysis of samples due to their instability during conservation. We believe that this new methodology can aid in the harmonization of the measurement of ECs and related compounds in clinical samples.

Twisted light transmission over 143 km

PubMed Central

Krenn, Mario; Handsteiner, Johannes; Fink, Matthias; Fickler, Robert; Ursin, Rupert; Zeilinger, Anton

2016-01-01

Spatial modes of light can potentially carry a vast amount of information, making them promising candidates for both classical and quantum communication. However, the distribution of such modes over large distances remains difficult. Intermodal coupling complicates their use with common fibers, whereas free-space transmission is thought to be strongly influenced by atmospheric turbulence. Here, we show the transmission of orbital angular momentum modes of light over a distance of 143 km between two Canary Islands, which is 50× greater than the maximum distance achieved previously. As a demonstration of the transmission quality, we use superpositions of these modes to encode a short message. At the receiver, an artificial neural network is used for distinguishing between the different twisted light superpositions. The algorithm is able to identify different mode superpositions with an accuracy of more than 80% up to the third mode order and decode the transmitted message with an error rate of 8.33%. Using our data, we estimate that the distribution of orbital angular momentum entanglement over more than 100 km of free space is feasible. Moreover, the quality of our free-space link can be further improved by the use of state-of-the-art adaptive optics systems. PMID:27856744

Twisted light transmission over 143 km

NASA Astrophysics Data System (ADS)

Krenn, Mario; Handsteiner, Johannes; Fink, Matthias; Fickler, Robert; Ursin, Rupert; Malik, Mehul; Zeilinger, Anton

2016-11-01

Spatial modes of light can potentially carry a vast amount of information, making them promising candidates for both classical and quantum communication. However, the distribution of such modes over large distances remains difficult. Intermodal coupling complicates their use with common fibers, whereas free-space transmission is thought to be strongly influenced by atmospheric turbulence. Here, we show the transmission of orbital angular momentum modes of light over a distance of 143 km between two Canary Islands, which is 50× greater than the maximum distance achieved previously. As a demonstration of the transmission quality, we use superpositions of these modes to encode a short message. At the receiver, an artificial neural network is used for distinguishing between the different twisted light superpositions. The algorithm is able to identify different mode superpositions with an accuracy of more than 80% up to the third mode order and decode the transmitted message with an error rate of 8.33%. Using our data, we estimate that the distribution of orbital angular momentum entanglement over more than 100 km of free space is feasible. Moreover, the quality of our free-space link can be further improved by the use of state-of-the-art adaptive optics systems.

Twisted light transmission over 143 km.

PubMed

Krenn, Mario; Handsteiner, Johannes; Fink, Matthias; Fickler, Robert; Ursin, Rupert; Malik, Mehul; Zeilinger, Anton

2016-11-29

Spatial modes of light can potentially carry a vast amount of information, making them promising candidates for both classical and quantum communication. However, the distribution of such modes over large distances remains difficult. Intermodal coupling complicates their use with common fibers, whereas free-space transmission is thought to be strongly influenced by atmospheric turbulence. Here, we show the transmission of orbital angular momentum modes of light over a distance of 143 km between two Canary Islands, which is 50× greater than the maximum distance achieved previously. As a demonstration of the transmission quality, we use superpositions of these modes to encode a short message. At the receiver, an artificial neural network is used for distinguishing between the different twisted light superpositions. The algorithm is able to identify different mode superpositions with an accuracy of more than 80% up to the third mode order and decode the transmitted message with an error rate of 8.33%. Using our data, we estimate that the distribution of orbital angular momentum entanglement over more than 100 km of free space is feasible. Moreover, the quality of our free-space link can be further improved by the use of state-of-the-art adaptive optics systems.

Grover's unstructured search by using a transverse field

NASA Astrophysics Data System (ADS)

Jiang, Zhang; Rieffel, Eleanor; Wang, Zhihui

2017-04-01

We design a circuit-based quantum algorithm to search for a needle in a haystack, giving the same quadratic speedup achieved by Grover's original algorithm. In our circuit-based algorithm, the problem Hamiltonian (oracle) and a transverse field (instead of Grover's diffusion operator) are applied to the system alternatively. We construct a periodic time sequence such that the resultant unitary drives a closed transition between two states, which have high degrees of overlap with the initial state (even superposition of all states) and the target state, respectively. Let N =2n be the size of the search space. The transition rate in our algorithm is of order Θ(1 /√{ N}) , and the overlaps are of order Θ(1) , yielding a nearly optimal query complexity of T =√{ N}(π / 2√{ 2}) . Our algorithm is inspired by a class of algorithms proposed by Farhi et al., namely the Quantum Approximate Optimization Algorithm (QAOA); our method offers a route to optimizing the parameters in QAOA by restricting them to be periodic in time.

Color enhancement for portable LCD displays in low-power mode

NASA Astrophysics Data System (ADS)

Shih, Kuang-Tsu; Huang, Tai-Hsiang; Chen, Homer H.

2011-09-01

Switching the backlight of handheld devices to low power mode saves energy but affects the color appearance of an image. In this paper, we consider the chroma degradation problem and propose an enhancement algorithm that incorporates the CIECAM02 appearance model to quantitatively characterize the problem. In the proposed algorithm, we enhance the color appearance of the image in low power mode by weighted linear superposition of the chroma of the image and that of the estimated dim-backlight image. Subjective tests are carried out to determine the perceptually optimal weighting and prove the effectiveness of our framework.

FAST-PT: a novel algorithm to calculate convolution integrals in cosmological perturbation theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

McEwen, Joseph E.; Fang, Xiao; Hirata, Christopher M.

2016-09-01

We present a novel algorithm, FAST-PT, for performing convolution or mode-coupling integrals that appear in nonlinear cosmological perturbation theory. The algorithm uses several properties of gravitational structure formation—the locality of the dark matter equations and the scale invariance of the problem—as well as Fast Fourier Transforms to describe the input power spectrum as a superposition of power laws. This yields extremely fast performance, enabling mode-coupling integral computations fast enough to embed in Monte Carlo Markov Chain parameter estimation. We describe the algorithm and demonstrate its application to calculating nonlinear corrections to the matter power spectrum, including one-loop standard perturbation theorymore » and the renormalization group approach. We also describe our public code (in Python) to implement this algorithm. The code, along with a user manual and example implementations, is available at https://github.com/JoeMcEwen/FAST-PT.« less

Operating Quantum States in Single Magnetic Molecules: Implementation of Grover's Quantum Algorithm.

PubMed

Godfrin, C; Ferhat, A; Ballou, R; Klyatskaya, S; Ruben, M; Wernsdorfer, W; Balestro, F

2017-11-03

Quantum algorithms use the principles of quantum mechanics, such as, for example, quantum superposition, in order to solve particular problems outperforming standard computation. They are developed for cryptography, searching, optimization, simulation, and solving large systems of linear equations. Here, we implement Grover's quantum algorithm, proposed to find an element in an unsorted list, using a single nuclear 3/2 spin carried by a Tb ion sitting in a single molecular magnet transistor. The coherent manipulation of this multilevel quantum system (qudit) is achieved by means of electric fields only. Grover's search algorithm is implemented by constructing a quantum database via a multilevel Hadamard gate. The Grover sequence then allows us to select each state. The presented method is of universal character and can be implemented in any multilevel quantum system with nonequal spaced energy levels, opening the way to novel quantum search algorithms.

Operating Quantum States in Single Magnetic Molecules: Implementation of Grover's Quantum Algorithm

NASA Astrophysics Data System (ADS)

Godfrin, C.; Ferhat, A.; Ballou, R.; Klyatskaya, S.; Ruben, M.; Wernsdorfer, W.; Balestro, F.

2017-11-01

Quantum algorithms use the principles of quantum mechanics, such as, for example, quantum superposition, in order to solve particular problems outperforming standard computation. They are developed for cryptography, searching, optimization, simulation, and solving large systems of linear equations. Here, we implement Grover's quantum algorithm, proposed to find an element in an unsorted list, using a single nuclear 3 /2 spin carried by a Tb ion sitting in a single molecular magnet transistor. The coherent manipulation of this multilevel quantum system (qudit) is achieved by means of electric fields only. Grover's search algorithm is implemented by constructing a quantum database via a multilevel Hadamard gate. The Grover sequence then allows us to select each state. The presented method is of universal character and can be implemented in any multilevel quantum system with nonequal spaced energy levels, opening the way to novel quantum search algorithms.

Reducing hole transporter use and increasing perovskite solar cell stability with dual-role polystyrene microgel particles.

PubMed

Chen, Mu; Mokhtar, Muhamad Z; Whittaker, Eric; Lian, Qing; Hamilton, Bruce; O'Brien, Paul; Zhu, Mingning; Cui, Zhengxing; Haque, Saif A; Saunders, Brian R

2017-07-20

Perovskite solar cells (PSCs) are a disruptive technology that continues to attract considerable attention due to their remarkable and sustained power conversion efficiency increase. Improving PSC stability and reducing expensive hole transport material (HTM) usage are two aspects that are gaining increased attention. In a new approach, we investigate the ability of insulating polystyrene microgel particles (MGs) to increase PSC stability and replace the majority of the HTM phase. MGs are sub-micrometre crosslinked polymer particles that swell in a good solvent. The MGs were prepared using a scalable emulsion polymerisation method. Mixed HTM/MG dispersions were subsequently spin-coated onto PSCs and formed composite HTM-MG layers. The HTMs employed were poly(triaryl amine) (PTAA), poly(3-hexylthiophene) (P3HT) and Spiro-MeOTAD (Spiro). The MGs formed mechanically robust composite HTMs with PTAA and P3HT. In contrast, Spiro-MG composites contained micro-cracks due the inability of the relatively small Spiro molecules to interdigitate. The efficiencies for the PSCs containing PTAA-MG and P3HT-MG decreased by only ∼20% compared to control PSCs despite PTAA and P3HT being the minority phases. They occupied only ∼35 vol% of the composite HTMs. An unexpected finding from the study was that the MGs dispersed well within the PTAA matrix. This morphology aided strong quenching of the CH 3 NH 3 PbI 3-x Cl x fluorescence. In addition, the open circuit voltages for the PSCs prepared using P3HT-MG increased by ∼170 mV compared to control PSCs. To demonstrate their versatility the MGs were also used to encapsulate P3HT-based PSCs. Solar cell stability data for the latter as well as those for PSCs containing composite HTM-MG were both far superior compared to data measured for a control PSC. Since MGs can reduce conjugated polymer use and increase stability they have good potential as dual-role PSC additives.

Classifying bilinear differential equations by linear superposition principle

NASA Astrophysics Data System (ADS)

Zhang, Lijun; Khalique, Chaudry Masood; Ma, Wen-Xiu

2016-09-01

In this paper, we investigate the linear superposition principle of exponential traveling waves to construct a sub-class of N-wave solutions of Hirota bilinear equations. A necessary and sufficient condition for Hirota bilinear equations possessing this specific sub-class of N-wave solutions is presented. We apply this result to find N-wave solutions to the (2+1)-dimensional KP equation, a (3+1)-dimensional generalized Kadomtsev-Petviashvili (KP) equation, a (3+1)-dimensional generalized BKP equation and the (2+1)-dimensional BKP equation. The inverse question, i.e., constructing Hirota Bilinear equations possessing N-wave solutions, is considered and a refined 3-step algorithm is proposed. As examples, we construct two very general kinds of Hirota bilinear equations of order 4 possessing N-wave solutions among which one satisfies dispersion relation and another does not satisfy dispersion relation.

Characterization of the Surface Film Formed on Molten AZ91D Magnesium Alloy in Atmospheres Containing SO2

NASA Astrophysics Data System (ADS)

Wang, Xian-Fei; Xiong, Shou-Mei

2012-11-01

The surface film formed on molten AZ91D magnesium alloy in an atmosphere containing SO2 was characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), Auger electron spectroscopy (AES), and X-ray photoelectron spectroscopy (XPS). The surface film primarily contained MgO and MgS and had a network structure. MgS increased the Pilling-Bedworth ratio of the film and enhanced its protective capability. The films with a few pores at the surface consisted of two layers with an outer MgO layer and an inner layer of MgO and MgS. The film without pores at the surface also contained MgS and small amounts of MgSO4 in the outer layer. Increasing the SO2 content in the atmosphere promoted film growth and the formation of the protective film was prevented with the increased temperature.

A Noniterative Technique for the Direct Implementation of Well Bore Boundary Conditions in Three-Dimensional Heterogeneous Formations

NASA Astrophysics Data System (ADS)

Sudicky, E. A.; Unger, A. J. A.; Lacombe, S.

1995-02-01

A noniterative algorithm for handling prescribed well bore boundary conditions while pumping or injecting fluid in a three-dimensional heterogeneous aquifer is described. The algorithm is formulated by superimposing conductive one-dimensional line elements representing the well screen onto the three-dimensional matrix elements epresenting the aquifer. Storage in the well casing is also naturally accommodated by the superposition of the line elements. The numerical algorithm is verified by comparison with results obtained from the solution of Papadopulos and Cooper (1967). A large-scale example problem involving groundwater extraction from a partially penetrating pumping well located in a highly heterogeneous confined aquifer is presented to demonstrate the utility of the approach.

Theoretical study of the electronic states of newly detected dications. Case of MgS2+ AND SiN2+

NASA Astrophysics Data System (ADS)

Khairat, Toufik; Salah, Mohammed; Marakchi, Khadija; Komiha, Najia

2017-08-01

The dications MgS2+ and SiN2+, experimentally observed by mass spectroscopy, are theoretically studied here. The potential energy curves of the electronic states of the two dications MgS2+ and SiN2+ are mapped and their spectroscopic parameters determined by analysis of the electronic, vibrational and rotational wave functions obtained by using complete active space self-consistent field (CASSCF) calculations, followed by the internally contracted multi-reference configuration interaction (MRCI)+Q associated with the AV5Z correlation consistent atomic orbitals basis sets. In the following, besides the characterization of the potential energy curves, excitation and dissociation energies, spectroscopic constants and a double-ionization spectra of MgS and SiN are determined using the transition moments values and Franck-Condon factors. The electronic ground states of the two dications appear to be of X3∑-nature for MgS2+ and X4∑- for SiN2+ and shows potential wells of about 1.20 eV and 1.40 eV, respectively. Several excited states of these doubly charged molecules also depicted here are slightly bound. The adiabatic double-ionization energies were deduced, at 21.4 eV and 18.4 eV, respectively, from the potential energy curves of the electronic ground states of the neutral and charged species. The neutral molecules, since involved, are also investigated here. From all these results, the experimental lines of the mass spectra of MgS and SiN could be partly assigned.

MGS dynamic deflections and working widths at lower speeds.

DOT National Transportation Integrated Search

2015-09-01

The Midwest Guardrail System (MGS) has been full-scale crash tested in many configurations, including : installations adjacent to slopes, with different types of wood posts, with and without blockouts, for culvert and bridge : applications, and at hi...

Implementation of Monte Carlo Dose calculation for CyberKnife treatment planning

NASA Astrophysics Data System (ADS)

Ma, C.-M.; Li, J. S.; Deng, J.; Fan, J.

2008-02-01

Accurate dose calculation is essential to advanced stereotactic radiosurgery (SRS) and stereotactic radiotherapy (SRT) especially for treatment planning involving heterogeneous patient anatomy. This paper describes the implementation of a fast Monte Carlo dose calculation algorithm in SRS/SRT treatment planning for the CyberKnife® SRS/SRT system. A superposition Monte Carlo algorithm is developed for this application. Photon mean free paths and interaction types for different materials and energies as well as the tracks of secondary electrons are pre-simulated using the MCSIM system. Photon interaction forcing and splitting are applied to the source photons in the patient calculation and the pre-simulated electron tracks are repeated with proper corrections based on the tissue density and electron stopping powers. Electron energy is deposited along the tracks and accumulated in the simulation geometry. Scattered and bremsstrahlung photons are transported, after applying the Russian roulette technique, in the same way as the primary photons. Dose calculations are compared with full Monte Carlo simulations performed using EGS4/MCSIM and the CyberKnife treatment planning system (TPS) for lung, head & neck and liver treatments. Comparisons with full Monte Carlo simulations show excellent agreement (within 0.5%). More than 10% differences in the target dose are found between Monte Carlo simulations and the CyberKnife TPS for SRS/SRT lung treatment while negligible differences are shown in head and neck and liver for the cases investigated. The calculation time using our superposition Monte Carlo algorithm is reduced up to 62 times (46 times on average for 10 typical clinical cases) compared to full Monte Carlo simulations. SRS/SRT dose distributions calculated by simple dose algorithms may be significantly overestimated for small lung target volumes, which can be improved by accurate Monte Carlo dose calculations.

Midwest Guardrail System (MGS) with southern yellow pine posts.

DOT National Transportation Integrated Search

2013-09-01

The Midwest Guardrail System (MGS) has previously been approved for use with various alternative species of wood posts. However, Southern Yellow Pine (SYP) is the most common wood guardrail post material in the United States. The goal of this researc...

Increased span length for the MGS long-span guardrail system.

DOT National Transportation Integrated Search

2014-12-01

Long-span guardrail systems have been recognized as an effective means of shielding low-fill culverts while : minimizing construction efforts and limiting culvert damage and repair. The current MGS long-span design provided the : capability to span u...

Global perspectives for prevention of infectious diseases associated with mass gatherings.

PubMed

Abubakar, Ibrahim; Gautret, Philippe; Brunette, Gary W; Blumberg, Lucille; Johnson, David; Poumerol, Gilles; Memish, Ziad A; Barbeschi, Maurizio; Khan, Ali S

2012-01-01

We assess risks of communicable diseases that are associated with mass gatherings (MGs), outline approaches to risk assessment and mitigation, and draw attention to some key challenges encountered by organisers and participants. Crowding and lack of sanitation at MGs can lead to the emergence of infectious diseases, and rapid population movement can spread them across the world. Many infections pose huge challenges to planners of MGs; however, these events also provide an opportunity to engage in public health action that will benefit host communities and the countries from which participants originate. Copyright © 2012 Elsevier Ltd. All rights reserved.

Addressing the Compositional Variability of Acidalia Planitia Using MGS/TES: Constraints on Martian Hydroxide Mineralogy

NASA Astrophysics Data System (ADS)

Noe Dobrea, E. Z.; Bell, J. F., III

2002-03-01

We investigate the spectral variability of Acidalia Planitia using MGS/TES. Atmospheric removal is done by constraining our observations to EPF's. Preliminary analysis show variability of the 6-micron feature attributed water/OH-bearing minerals.

MGS images of Mars

NASA Technical Reports Server (NTRS)

1999-01-01

The Mars Global Surveyor (MGS) camera captured images of a pit formed when a straight-walled trough collapsed. The heart shaped pit is about 2.3 kilometers (1.4 miles) wide. It is located on the east flank of the Alba Patera volcano in northern Tharsis.

A Multicenter Phase I/II Study of the BCNU Implant (Gliadel ® Wafer) for Japanese Patients with Malignant Gliomas

PubMed Central

AOKI, Tomokazu; NISHIKAWA, Ryo; SUGIYAMA, Kazuhiko; NONOGUCHI, Naosuke; KAWABATA, Noriyuki; MISHIMA, Kazuhiko; ADACHI, Jun-ichi; KURISU, Kaoru; YAMASAKI, Fumiyuki; TOMINAGA, Teiji; KUMABE, Toshihiro; UEKI, Keisuke; HIGUCHI, Fumi; YAMAMOTO, Tetsuya; ISHIKAWA, Eiichi; TAKESHIMA, Hideo; YAMASHITA, Shinji; ARITA, Kazunori; HIRANO, Hirofumi; YAMADA, Shinobu; MATSUTANI, Masao

2014-01-01

Carmustine (BCNU) implants (Gliadel® Wafer, Eisai Inc., New Jersey, USA) for the treatment of malignant gliomas (MGs) were shown to enhance overall survival in comparison to placebo in controlled clinical trials in the United States and Europe. A prospective, multicenter phase I/II study involving Japanese patients with MGs was performed to evaluate the efficacy, safety, and pharmacokinetics of BCNU implants. The study enrolled 16 patients with newly diagnosed MGs and 8 patients with recurrent MGs. After the insertion of BCNU implants (8 sheets maximum, 61.6 mg BCNU) into the removal cavity, various chemotherapies (including temozolomide) and radiotherapies were applied. After placement, overall and progression-free survival rates and whole blood BCNU levels were evaluated. In patients with newly diagnosed MGs, the overall survival rates at 12 months and 24 months were 100.0% and 68.8%, and the progression-free survival rate at 12 months was 62.5%. In patients with recurrent MGs, the progression-free survival rate at 6 months was 37.5%. There were no grade 4 or higher adverse events noted due to BCNU implants, and grade 3 events were observed in 5 of 24 patients (20.8%). Whole blood BCNU levels reached a peak of 19.4 ng/mL approximately 3 hours after insertion, which was lower than 1/600 of the peak BCNU level recorded after intravenous injections. These levels decreased to less than the detection limit (2.00 ng/mL) after 24 hours. The results of this study involving Japanese patients are comparable to those of previous studies in the United States and Europe. PMID:24739422

Meier-Gorlin syndrome.

PubMed

de Munnik, Sonja A; Hoefsloot, Elisabeth H; Roukema, Jolt; Schoots, Jeroen; Knoers, Nine V A M; Brunner, Han G; Jackson, Andrew P; Bongers, Ernie M H F

2015-09-17

Meier-Gorlin syndrome (MGS) is a rare autosomal recessive primordial dwarfism disorder, characterized by microtia, patellar applasia/hypoplasia, and a proportionate short stature. Associated clinical features encompass feeding problems, congenital pulmonary emphysema, mammary hypoplasia in females and urogenital anomalies, such as cryptorchidism and hypoplastic labia minora and majora. Typical facial characteristics during childhood comprise a small mouth with full lips and micro-retrognathia. During ageing, a narrow, convex nose becomes more prominent. The diagnosis MGS should be considered in patients with at least two of the three features of the clinical triad of microtia, patellar anomalies, and pre- and postnatal growth retardation. In patients with short stature and/or microtia, the patellae should be assessed with care by ultrasonography before age 6 or radiography thereafter. Mutations in one of five genes (ORC1, ORC4, ORC6, CDT1, and CDC6) of the pre-replication complex, involved in DNA-replication, are detected in approximately 67-78% of patients with MGS. Patients with ORC1 and ORC4 mutations appear to have the most severe short stature and microcephaly. Management should be directed towards in-depth investigation, treatment and prevention of associated problems, such as growth retardation, feeding problems, hearing loss, luxating patellae, knee pain, gonarthrosis, and possible pulmonary complications due to congenital pulmonary emphysema with or without broncho- or laryngomalacia. Growth hormone treatment is ineffective in most patients with MGS, but may be effective in patients in whom growth continues to decrease after the first year of life (usually growth velocity normalizes after the first year) and with low levels of IGF1. At present, few data is available about reproduction of females with MGS, but the risk of premature labor might be increased. Here, we propose experience-based guidelines for the regular care and treatment of MGS patients.

Communication: A novel implementation to compute MP2 correlation energies without basis set superposition errors and complete basis set extrapolation.

PubMed

Dixit, Anant; Claudot, Julien; Lebègue, Sébastien; Rocca, Dario

2017-06-07

By using a formulation based on the dynamical polarizability, we propose a novel implementation of second-order Møller-Plesset perturbation (MP2) theory within a plane wave (PW) basis set. Because of the intrinsic properties of PWs, this method is not affected by basis set superposition errors. Additionally, results are converged without relying on complete basis set extrapolation techniques; this is achieved by using the eigenvectors of the static polarizability as an auxiliary basis set to compactly and accurately represent the response functions involved in the MP2 equations. Summations over the large number of virtual states are avoided by using a formalism inspired by density functional perturbation theory, and the Lanczos algorithm is used to include dynamical effects. To demonstrate this method, applications to three weakly interacting dimers are presented.

Midwest guardrail system (MGS) with an omitted post.

DOT National Transportation Integrated Search

2016-02-22

The objective of this research study was to evaluate the MGS (31 tall W-beam guardrail) with an omitted post according to the safety performance criteria provided in MASH. A single full-scale crash test was conducted with the 2270P pickup truck in...

Local-structure change rendered by electronic localization-delocalization transition in cerium-based metallic glasses

NASA Astrophysics Data System (ADS)

Luo, Qiang; Schwarz, Björn; Swarbrick, Janine C.; Bednarčik, Jozef; Zhu, Yingcai; Tang, Meibo; Zheng, Lirong; Li, Ran; Shen, Jun; Eckert, Jürgen

2018-02-01

With increasing temperature, metallic glasses (MGs) undergo first glass transition without pronounced structural change and then crystallization with distinct variation in structure and properties. The present study shows a structural change of short-range order induced by an electron-delocalization transition, along with an unusual large-volume shrinkage in Ce-based MGs. An f -electron localization-delocalization transition with thermal hysteresis is observed from the temperature dependence of x-ray absorption spectroscopy and resonant inelastic x-ray scattering spectra, indicating an inheritance of the 4 f configuration of pure Ce. However, the delocalization transition becomes broadened due to the local structural heterogeneity and related fluctuation of 4 f levels in the Ce-based MGs. The amorphous structure regulated 4 f delocalization of Ce leads to bond shortening and abnormal structure change of the topological and chemical short-range orders. Due to the hierarchical bonding nature, the structure should change in a similar manner on different length scales (but not isostructurally like the Ce metal) in Ce-based MGs.

Tear Film Lipids

PubMed Central

Butovich, Igor A.

2013-01-01

Human meibomian gland secretions (MGS, or meibum) are formed from a complex mixture of lipids of different classes such as wax esters, cholesteryl esters, (O-acyl)-ω-hydroxy fatty acids (OAHFA) and their esters, acylglycerols, diacylated diols, free fatty acids, cholesterol, and a smaller amount of other polar and nonpolar lipids, whose chemical nature and the very presence in MGS have been a matter of intense debates. The purpose of this review is to discuss recent results that were obtained using different experimental techniques, estimate limitations of their usability, and discuss their biochemical, biophysical, and physiological implications. To create a lipid map of MGS and tears, the results obtained in the author’s laboratory were integrated with available information on chemical composition of MGS and tears. The most informative approaches that are available today to researchers, such as HPLC-MS, GC-MS, and proton NMR, are discussed in details. A map of the meibomian lipidome (as it is seen in reverse phase liquid chromatography/mass spectrometry experiments) is presented. Directions of future efforts in the area are outlined. PMID:23769846

Alternative method of quantum state tomography toward a typical target via a weak-value measurement

NASA Astrophysics Data System (ADS)

Chen, Xi; Dai, Hong-Yi; Yang, Le; Zhang, Ming

2018-03-01

There is usually a limitation of weak interaction on the application of weak-value measurement. This limitation dominates the performance of the quantum state tomography toward a typical target in the finite and high-dimensional complex-valued superposition of its basis states, especially when the compressive sensing technique is also employed. Here we propose an alternative method of quantum state tomography, presented as a general model, toward such typical target via weak-value measurement to overcome such limitation. In this model the pointer for the weak-value measurement is a qubit, and the target-pointer coupling interaction is no longer needed within the weak interaction limitation, meanwhile this interaction under the compressive sensing can be described with the Taylor series of the unitary evolution operator. The postselection state at the target is the equal superposition of all basis states, and the pointer readouts are gathered under multiple Pauli operator measurements. The reconstructed quantum state is generated from an optimization algorithm of total variation augmented Lagrangian alternating direction algorithm. Furthermore, we demonstrate an example of this general model for the quantum state tomography toward the planar laser-energy distribution and discuss the relations among some parameters at both our general model and the original first-order approximate model for this tomography.

Quantum reinforcement learning.

PubMed

Dong, Daoyi; Chen, Chunlin; Li, Hanxiong; Tarn, Tzyh-Jong

2008-10-01

The key approaches for machine learning, particularly learning in unknown probabilistic environments, are new representations and computation mechanisms. In this paper, a novel quantum reinforcement learning (QRL) method is proposed by combining quantum theory and reinforcement learning (RL). Inspired by the state superposition principle and quantum parallelism, a framework of a value-updating algorithm is introduced. The state (action) in traditional RL is identified as the eigen state (eigen action) in QRL. The state (action) set can be represented with a quantum superposition state, and the eigen state (eigen action) can be obtained by randomly observing the simulated quantum state according to the collapse postulate of quantum measurement. The probability of the eigen action is determined by the probability amplitude, which is updated in parallel according to rewards. Some related characteristics of QRL such as convergence, optimality, and balancing between exploration and exploitation are also analyzed, which shows that this approach makes a good tradeoff between exploration and exploitation using the probability amplitude and can speedup learning through the quantum parallelism. To evaluate the performance and practicability of QRL, several simulated experiments are given, and the results demonstrate the effectiveness and superiority of the QRL algorithm for some complex problems. This paper is also an effective exploration on the application of quantum computation to artificial intelligence.

Hydraulic containment: analytical and semi-analytical models for capture zone curve delineation

NASA Astrophysics Data System (ADS)

Christ, John A.; Goltz, Mark N.

2002-05-01

We present an efficient semi-analytical algorithm that uses complex potential theory and superposition to delineate the capture zone curves of extraction wells. This algorithm is more flexible than previously published techniques and allows the user to determine the capture zone for a number of arbitrarily positioned extraction wells pumping at different rates. The algorithm is applied to determine the capture zones and optimal well spacing of two wells pumping at different flow rates and positioned at various orientations to the direction of regional groundwater flow. The algorithm is also applied to determine capture zones for non-colinear three-well configurations as well as to determine optimal well spacing for up to six wells pumping at the same rate. We show that the optimal well spacing is found by minimizing the difference in the stream function evaluated at the stagnation points.

Iteration and superposition encryption scheme for image sequences based on multi-dimensional keys

NASA Astrophysics Data System (ADS)

Han, Chao; Shen, Yuzhen; Ma, Wenlin

2017-12-01

An iteration and superposition encryption scheme for image sequences based on multi-dimensional keys is proposed for high security, big capacity and low noise information transmission. Multiple images to be encrypted are transformed into phase-only images with the iterative algorithm and then are encrypted by different random phase, respectively. The encrypted phase-only images are performed by inverse Fourier transform, respectively, thus new object functions are generated. The new functions are located in different blocks and padded zero for a sparse distribution, then they propagate to a specific region at different distances by angular spectrum diffraction, respectively and are superposed in order to form a single image. The single image is multiplied with a random phase in the frequency domain and then the phase part of the frequency spectrums is truncated and the amplitude information is reserved. The random phase, propagation distances, truncated phase information in frequency domain are employed as multiple dimensional keys. The iteration processing and sparse distribution greatly reduce the crosstalk among the multiple encryption images. The superposition of image sequences greatly improves the capacity of encrypted information. Several numerical experiments based on a designed optical system demonstrate that the proposed scheme can enhance encrypted information capacity and make image transmission at a highly desired security level.

Multiparity evaluation of calving ease and stillbirth with separate genetic effects by parity.

PubMed

Wiggans, G R; Cole, J B; Thornton, L L M

2008-08-01

Evaluations that analyze first and later parities as correlated traits were developed separately for calving ease (CE) from over 15 million calving records of Holsteins, Brown Swiss, and Holstein-Brown Swiss crossbreds and for stillbirth (SB) from 7.4 million of the Holstein CE records. Calving ease was measured on a scale of 1 (no difficulty) to 5 (difficult birth); SB status was designated as live or dead within 48 h. Scores for CE and SB were transformed separately for each trait by parity (first or later) and calf sex (male or female) and converted to a unit standard deviation scale. For variance component estimation, Holstein data were selected for the 2,968 bulls with the most records as sire or maternal grandsire (MGS). Six samples were selected by herd; samples ranged in size from 97,756 to 146,138 records. A multiparity sire-MGS model was used to calculate evaluations separately for CE and for SB with first and later parities as correlated traits. Fixed effects were year-season, calf sex, and sire and MGS birth years; random effects were herd-year interaction, sire, and MGS. For later parities, sex effects were separated by parity. The genetic correlation between first and later parities was 0.79 for sire and 0.81 for MGS for CE, and 0.83 for sire and 0.74 for MGS for SB. For national CE evaluations, which also include Brown Swiss, a fixed effect for breed was added to the model. Correlations between solutions on the underlying scale from the January 2008 USDA CE evaluation with those from the multiparity analysis for CE were 0.89 and 0.91 for first- and later-parity sire effects and 0.71 and 0.88 for first- and later-parity MGS effects; the larger value for later parity reflects that later parities comprised 64% of the data. Corresponding correlations for SB were 0.81 and 0.82 for first- and later-parity sire effects and 0.46 and 0.83 for first- and later-parity MGS effects, respectively. Correlations were higher when only bulls with a multiparity reliability of >65% were included. The multiparity analysis accounted for genetic differences in calving performance between first and later parities. Evaluations should become more stable as the portion of a bull's observations from different parities changes over his lifetime. Accuracy of the net merit index can be improved by adjusting weights to use evaluations for separate parities optimally.

Comparison of selected dose calculation algorithms in radiotherapy treatment planning for tissues with inhomogeneities

NASA Astrophysics Data System (ADS)

Woon, Y. L.; Heng, S. P.; Wong, J. H. D.; Ung, N. M.

2016-03-01

Inhomogeneity correction is recommended for accurate dose calculation in radiotherapy treatment planning since human body are highly inhomogeneous with the presence of bones and air cavities. However, each dose calculation algorithm has its own limitations. This study is to assess the accuracy of five algorithms that are currently implemented for treatment planning, including pencil beam convolution (PBC), superposition (SP), anisotropic analytical algorithm (AAA), Monte Carlo (MC) and Acuros XB (AXB). The calculated dose was compared with the measured dose using radiochromic film (Gafchromic EBT2) in inhomogeneous phantoms. In addition, the dosimetric impact of different algorithms on intensity modulated radiotherapy (IMRT) was studied for head and neck region. MC had the best agreement with the measured percentage depth dose (PDD) within the inhomogeneous region. This was followed by AXB, AAA, SP and PBC. For IMRT planning, MC algorithm is recommended for treatment planning in preference to PBC and SP. The MC and AXB algorithms were found to have better accuracy in terms of inhomogeneity correction and should be used for tumour volume within the proximity of inhomogeneous structures.

Determinants of each domain of the Short Physical Performance Battery in COPD.

PubMed

Bernabeu-Mora, Roberto; Giménez-Giménez, Luz M; Montilla-Herrador, Joaquina; García-Guillamón, Gloria; García-Vidal, José Antonio; Medina-Mirapeix, Francesc

2017-01-01

The Short Physical Performance Battery (SPPB) is an assessment tool with good prognostic value in COPD. It includes the following: standing balance, 4 m gait speed test (4MGS), and the timed five-repetition sit-to-stand test (5STS). The specific differences in determinants between these three tasks have not been adequately characterized in COPD patients. We aimed to identify health-related, functional, and psychological determinants of each SPPB test. We conducted a cross-sectional analysis of 137 patients with stable COPD. Patients performed the SPPB, quadriceps muscle strength (QMS), exercise tolerance test (6-min walk test [6MWT]), and pulmonary function; and health-related and psychological factors, physical activity, the COPD assessment test (CAT), body mass index, age, and depression were assessed. Separate multivariable regression models predicting the 4MGS, 5STS, and balance test results described 31%, 39.1%, and 12.1% of the variance for each test, respectively. QMS was negatively associated with all three tests. The 6MWT was negatively associated with the 4MGS and 5STS. Depression and age were positively associated with 4MGS scores, whereas CAT and age were positively associated with 5STS scores. The three SPPB tests did not provide equivalent information regarding a COPD patient's status. The 5STS was associated with health status factors, while the 4MGS was associated with psychological factors.

Determinants of each domain of the Short Physical Performance Battery in COPD

PubMed Central

Bernabeu-Mora, Roberto; Giménez-Giménez, Luz M; Montilla-Herrador, Joaquina; García-Guillamón, Gloria; García-Vidal, José Antonio; Medina-Mirapeix, Francesc

2017-01-01

Background The Short Physical Performance Battery (SPPB) is an assessment tool with good prognostic value in COPD. It includes the following: standing balance, 4 m gait speed test (4MGS), and the timed five-repetition sit-to-stand test (5STS). The specific differences in determinants between these three tasks have not been adequately characterized in COPD patients. We aimed to identify health-related, functional, and psychological determinants of each SPPB test. Methods We conducted a cross-sectional analysis of 137 patients with stable COPD. Patients performed the SPPB, quadriceps muscle strength (QMS), exercise tolerance test (6-min walk test [6MWT]), and pulmonary function; and health-related and psychological factors, physical activity, the COPD assessment test (CAT), body mass index, age, and depression were assessed. Results Separate multivariable regression models predicting the 4MGS, 5STS, and balance test results described 31%, 39.1%, and 12.1% of the variance for each test, respectively. QMS was negatively associated with all three tests. The 6MWT was negatively associated with the 4MGS and 5STS. Depression and age were positively associated with 4MGS scores, whereas CAT and age were positively associated with 5STS scores. Conclusion The three SPPB tests did not provide equivalent information regarding a COPD patient’s status. The 5STS was associated with health status factors, while the 4MGS was associated with psychological factors. PMID:28883721

Comparison of Physical Properties of Marine and Arctic Gas-Hydrate-Bearing Deposits

NASA Astrophysics Data System (ADS)

Winters, W. J.; Walker, M.; Collett, T. S.; Bryant, S. L.; Novosel, I.; Wilcox-Cline, R.; Bing, J.; Gomes, M. L.

2009-12-01

Gas hydrate (GH) occurs in both marine settings and in arctic environments within a wide variety of sediment types. Grain-size analyses from both environments indicate that intrinsic host-sediment properties have a strong influence on gas-hydrate distribution and morphologic characteristics. Depending on the amount formed or dissociated, gas hydrate can significantly change in situ sediment acoustic, mechanical, and hydraulic properties. The U.S. Geological Survey, in cooperation with the U.S. Dept. of Energy, BP Expl.-Alaska, Nat. GH Prog. of India, Canadian Geological Survey, Int. Ocean Drilling Program, Japan Oil Gas and Metals Nat. Corp., Japan Pet. Expl. Co., Int. Marine Past Global Changes Study (IMAGES) program, and Paleoceanography of the Atlantic and Geochemistry (PAGE) program, determined physical properties from marine and arctic sediments and their relation to the presence of GH. At two arctic sites, the Mount Elbert well on the Alaskan North Slope and the Mallik wells on the Mackenzie Delta, NWT, >10-m thick gas-hydrate-bearing (GHB) sandy deposits are capped by finer-grained sediments that may reduce gas migration. In the Mount Elbert well, average median grain sizes (MGS) for the two thickest GHB deposits are 65 and 60 µm. Finer-grained (average MGS of 9 and 28 µm) sediments have plug permeabilities that are 300 and 14 times smaller than underlying GHB sediment. Average MGS of GHB sediment from the Mallik 2L well is ~ 111 µm, compared to overlying sediment with an average MGS of ~ 32 µm. Gas hydrate morphology in the Gulf of Mexico (GOM) and offshore India is substantially more complex than in the arctic, and is related to pervasive, although not exclusive, finer-grained deposits. Massive, several-cm thick, GH layers were recovered in piston cores in the northern GOM, in sediment with little visible lithologic variability (average MGS ~ 0.8 µm). In wells off the east coast of India, GH was present in sand-rich, fractured clay, and reservoirs with both characteristics. Maximum MGS measured on more than 1200 samples was 46 µm, but the average MGS for 14 wells varied from 5 to 10 µm. At Site 10, in the Krishna-Godavari Basin, GH was observed in several morphologic configurations, including complex high-angle planar and rotational veins, solid nodules, and disseminated, in sediment with average MGS of 5 µm, liquid limits between 70 and 98, and plastic limits between 33 and 49. Sediment in a 692-m deep well drilled off the Andaman Islands sporadically hosted disseminated GH in thin coarser-grained ash beds and ash-rich zones. Average and maximum MGS in this well is 6 and 17 µm, respectively. To date, sandy GH reservoirs (with some exceptions, e.g., Nankai Trough) are typically associated with the arctic. However, the presence of thick offshore sand-rich GHB reservoirs is the subject of current investigations, such as by the Gulf of Mexico Joint Industry Project (JIP).

MGS Online, Maryland Geological Survey's Internet Home

Science.gov Websites

Maryland Department of Natural Resources Maryland Geological Survey State of Maryland Home Maryland available through the Maryland Geological Survey. Explore our website! (Dale Shelton of MGS discusses the the Maryland Geological Survey! The Maryland Geological Survey, created in 1896, is a scientific

Modification of absorbent poly(glycerol-glutaric acid) films by the addition of monoglycerides

USDA-ARS?s Scientific Manuscript database

Monoglycerides (MGs) have been incorporated into the matrix of poly-(glycerol-co-glutaric acid) films to investigate their effect on the thermal, mechanical, and solvent absorption properties of the resultant films. MGs were concentrated using a combination of solvent extraction and molecular disti...

Multiple Emission Angle Surface-Atmosphere Separations of MGS Thermal Emission Spectrometer Data

NASA Technical Reports Server (NTRS)

Bandfield, J. L.; Smith, M. D.

2001-01-01

Multiple emission angle observations taken by MGS-TES have been used to derive atmospheric opacities and surface temperatures and emissivities with increased accuracy and wavelength coverage. Martian high albedo region surface spectra have now been isolated. Additional information is contained in the original extended abstract.

Ion mobility spectrometry: A personal view of its development at UCSB

DTIC Science & Technology

2014-09-15

molecules. As we progressed we realized that new, more accurate algorithms were needed to augment our early projection approximation (PA) for determining...required. The goal was to maintain some of the speed of the projection approximation and retain the accuracy of the trajectory method. Christian...Bleiholder, while a postdoc in my group, did just that by development of the projection superposition approximation (PSA) [31–35]. This new method is 100

Molecular beam epitaxy-grown wurtzite MgS thin films for solar-blind ultra-violet detection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lai, Y. H.; He, Q. L.; Department of Physics and William Mong Institute of Nano Science and Technology, The Hong Kong University of Science and Technology, HKSAR, People's Republic of China

2013-04-29

Molecular beam epitaxy grown MgS on GaAs(111)B substrate was resulted in wurtzite phase, as demonstrated by detailed structural characterizations. Phenomenological arguments were used to account for why wurtzite phase is preferred over zincblende phase or its most stable rocksalt phase. Results of photoresponse and reflectance measurements performed on wurtzite MgS photodiodes suggest a direct bandgap at around 5.1 eV. Their response peaks at 245 nm with quantum efficiency of 9.9% and enjoys rejection of more than three orders at 320 nm and close to five orders at longer wavelengths, proving the photodiodes highly competitive in solar-blind ultraviolet detection.

Objective identification of residue ranges for the superposition of protein structures

PubMed Central

2011-01-01

Background The automation of objectively selecting amino acid residue ranges for structure superpositions is important for meaningful and consistent protein structure analyses. So far there is no widely-used standard for choosing these residue ranges for experimentally determined protein structures, where the manual selection of residue ranges or the use of suboptimal criteria remain commonplace. Results We present an automated and objective method for finding amino acid residue ranges for the superposition and analysis of protein structures, in particular for structure bundles resulting from NMR structure calculations. The method is implemented in an algorithm, CYRANGE, that yields, without protein-specific parameter adjustment, appropriate residue ranges in most commonly occurring situations, including low-precision structure bundles, multi-domain proteins, symmetric multimers, and protein complexes. Residue ranges are chosen to comprise as many residues of a protein domain that increasing their number would lead to a steep rise in the RMSD value. Residue ranges are determined by first clustering residues into domains based on the distance variance matrix, and then refining for each domain the initial choice of residues by excluding residues one by one until the relative decrease of the RMSD value becomes insignificant. A penalty for the opening of gaps favours contiguous residue ranges in order to obtain a result that is as simple as possible, but not simpler. Results are given for a set of 37 proteins and compared with those of commonly used protein structure validation packages. We also provide residue ranges for 6351 NMR structures in the Protein Data Bank. Conclusions The CYRANGE method is capable of automatically determining residue ranges for the superposition of protein structure bundles for a large variety of protein structures. The method correctly identifies ordered regions. Global structure superpositions based on the CYRANGE residue ranges allow a clear presentation of the structure, and unnecessary small gaps within the selected ranges are absent. In the majority of cases, the residue ranges from CYRANGE contain fewer gaps and cover considerably larger parts of the sequence than those from other methods without significantly increasing the RMSD values. CYRANGE thus provides an objective and automatic method for standardizing the choice of residue ranges for the superposition of protein structures. PMID:21592348

Mars Global Surveyor Ka-Band Frequency Data Analysis

NASA Astrophysics Data System (ADS)

Morabito, D.; Butman, S.; Shambayati, S.

2000-01-01

The Mars Global Surveyor (MGS) spacecraft, launched on November 7, 1996, carries an experimental space-to-ground telecommunications link at Ka-band (32 GHz) along with the primary X-band (8.4 GHz) downlink. The signals are simultaneously transmitted from a 1.5-in diameter parabolic high gain antenna (HGA) on MGS and received by a beam-waveguide (BWG) R&D 34-meter antenna located in NASA's Goldstone Deep Space Network (DSN) complex near Barstow, California. The projected 5-dB link advantage of Ka-band relative to X-band was confirmed in previous reports using measurements of MGS signal strength data acquired during the first two years of the link experiment from December 1996 to December 1998. Analysis of X-band and Ka-band frequency data and difference frequency (fx-fka)/3.8 data will be presented here. On board the spacecraft, a low-power sample of the X-band downlink from the transponder is upconverted to 32 GHz, the Ka-band frequency, amplified to I-W using a Solid State Power Amplifier, and radiated from the dual X/Ka HGA. The X-band signal is amplified by one of two 25 W TWTAs. An upconverter first downconverts the 8.42 GHz X-band signal to 8 GHz and then multiplies using a X4 multiplier producing the 32 GHz Ka-band frequency. The frequency source selection is performed by an RF switch which can be commanded to select a VCO (Voltage Controlled Oscillator) or USO (Ultra-Stable Oscillator) reference. The Ka-band frequency can be either coherent with the X-band downlink reference or a hybrid combination of the USO and VCO derived frequencies. The data in this study were chosen such that the Ka-band signal is purely coherent with the X-band signal, that is the downconverter is driven by the same frequency source as the X-band downlink). The ground station used to acquire the data is DSS-13, a 34-meter BWG antenna which incorporates a series of mirrors inside beam waveguide tubes which guide the energy to a subterranean pedestal room, providing a stable environment for the feed and electronics equipment. A dichroic plate is used to reflect the X-band energy and pass the Ka-band energy to another mirror. The RF energy for each band is then focused onto a feed horn and low-noise amplifier package. After amplification and RF/IF downconversion, the IF signals are sent to the Experimental Tone Tracker (ETT), a digital phase-lock-loop receiver, which simultaneously tracks both X-band and Ka-band carrier signals. Once a signal is detected, the ETT outputs estimates of the SNR in a I -Hz bandwidth (Pc/No), baseband phase and frequency of the signals every I -sec. Between December 1996 and December 1998, the Ka-band and X-band signals from MGS were tracked on a regular basis using the ETT. The Ka-band downlink frequencies described here were referenced to the spacecraft's on-board USO which was also the X-band frequency reference (fka= 3.8 fx). The ETT estimates of baseband phase at I -second sampled time tags were converted to sky frequency estimates. Frequency residuals were then generated for each band by removing a model frequency from each observable frequency at each time tag. The model included Doppler and other effects derived from spacecraft trajectory files obtained from the MGS Navigation Team. A simple troposphere correction was applied to the data. In addition to residuals, the USO frequencies emitted by the spacecraft were estimated. For several passes, the USO frequencies were determined from X-band data and from Ka-band data (referred to X-band by dividing by 3.8) and were found to be in good agreement. In addition, X-band USO frequency estimates from MGS Radio Science data acquired from operational DSN stations were available for comparison and were found to agree within the I Hz level. The remaining sub-Hertz differences were attributed to the different models and software algorithms used by MGS Radio Science and KaBLE-11. A summary of the results of a linear fit of the USO frequency versus time (day of year) is presented in Table I for an initial segment of passes.

Hydrovolcanic Landforms in Acidalia and Cydonia: Pan-Spectral Analysis with MGS MOC, MOLA, and TES

NASA Technical Reports Server (NTRS)

Farrand, W. H.; Gaddis, L. R.; Blundell, S.

2002-01-01

Landforms resembling tuyas and moberg hills and ridges in Acidalia and Cydonia are examined using MGS MOC, MOLA, and TES data. Using multiple datasets provides additional constraints on the question of whether these landforms are hydrovolcanic in origin. Additional information is contained in the original extended abstract.

MGS-TES Phase Effects and Thermal Infrared Directional Emissivity Field Measurements of Martian Analog Sites

NASA Astrophysics Data System (ADS)

Pitman, K. M.; Bandfield, J. L.; Wolff, M. J.

2006-03-01

We present a set of on- and off-nadir thermal IR field and laboratory emissivity spectra for three undisturbed Mars terrain analog sites and analyze them for presence or absence of directional emissivity effects. Comparisons to moderate and low albedo surface MGS-TES EPF sequences are discussed.

Origin of Shear Stability and Compressive Ductility Enhancement of Metallic Glasses by Metal Coating

PubMed Central

Sun, B. A.; Chen, S. H.; Lu, Y. M.; Zhu, Z. G.; Zhao, Y. L.; Yang, Y.; Chan, K. C.; Liu, C. T.

2016-01-01

Metallic glasses (MGs) are notorious for the poor macroscopic ductility and to overcome the weakness various intrinsic and extrinsic strategies have been proposed in past decades. Among them, the metal coating is regarded as a flexible and facile approach, yet the physical origin is poorly understood due to the complex nature of shear banding process. Here, we studied the origin of ductile enhancement in the Cu-coating both experimentally and theoretically. By examining serrated shear events and their stability of MGs, we revealed that the thin coating layer plays a key role in stopping the final catastrophic failure of MGs by slowing down shear band dynamics and thus retarding its attainment to a critical instable state. The mechanical analysis on interplay between the coating layer and shear banding process showed the enhanced shear stability mainly comes from the lateral tension of coating layer induced by the surface shear step and the bonding between the coating layer and MGs rather than the layer thickness is found to play a key role in contributing to the shear stability. PMID:27271435

Characterization of the Martian magnetic topology response to extreme solar transient events with MGS data

NASA Astrophysics Data System (ADS)

Xu, S.; Curry, S.; Mitchell, D. L.; Luhmann, J. G.; Lillis, R. J.; Dong, C.

2017-12-01

Characterizing how the solar cycle affects the physics of the Mars-solar wind interaction can improve our understanding of Mars' atmospheric evolution and the plasma environment at Mars. In particular, solar transient events such as Interplanetary Coronal Mass Ejections (ICMEs) and Stream Interaction Regions (SIRs) significantly change the solar-wind interaction, including the magnetic topology and ion acceleration. However, both the Mars Express and Mars Atmosphere Volatile EvolutioN (MAVEN) missions have encountered relatively few extreme solar transient events due to the recent low solar activity (2004-2017). In contrast, Mars Global Surveyor (MGS) was operating during a relatively active solar maximum (1999-2003). Based on new results from MAVEN, this study reanalyzes MGS data to better understand how the Martian plasma environment responds to extreme solar events. In particular, we aim to investigate how the magnetic topology during these extreme events differs from the topology during quiet times. We conduct orbit comparisons of the magnetic topology inferred from MGS electron pitch angle distributions during quiet periods and extreme events to determine how the open and closed field patterns respond to extreme events.

Sink property of metallic glass free surfaces

DOE PAGES

Shao, Lin; Fu, Engang; Price, Lloyd; ...

2015-03-16

When heated to a temperature close to glass transition temperature, metallic glasses (MGs) begin to crystallize. Under deformation or particle irradiation, crystallization occurs at even lower temperatures. Hence, phase instability represents an application limit for MGs. Here, we report that MG membranes of a few nanometers thickness exhibit properties different from their bulk MG counterparts. The study uses in situ transmission electron microscopy with concurrent heavy ion irradiation and annealing to observe crystallization behaviors of MGs. For relatively thick membranes, ion irradiations introduce excessive free volumes and thus induce nanocrystal formation at a temperature linearly decreasing with increasing ion fluences.more » For ultra-thin membranes, however, the critical temperature to initiate crystallization is about 100 K higher than the bulk glass transition temperature. Molecular dynamics simulations indicate that this effect is due to the sink property of the surfaces which can effectively remove excessive free volumes. These findings suggest that nanostructured MGs having a higher surface to volume ratio are expected to have higher crystallization resistance, which could pave new paths for materials applications in harsh environments requiring higher stabilities.« less

The Mars Orbiter Altimeter (MOLA) Investigation of the Shape and Topography of Mars

NASA Technical Reports Server (NTRS)

Smith, David E.; Zuber, Maria T.

2001-01-01

The Mars Orbiter Laser Altimeter (MOLA) is an instrument on the Mars Global Surveyor (MGS) spacecraft that has been orbiting Mars since September 1997. After some preliminary observations in Sept/Oct, 1997 and in the spring and summer of 1998, the MGS spacecraft entered its mapping orbit of 400 km above the surface of Mars in February 1999. MGS began a 2 year program of systematically mapping the planet with a camera (MOC), thermal emission spectrometer (TES), magnetometer (MAG), laser altimeter (MOLA), and a radio science investigation for gravity and radio occultations. MOLA has a 48mJ, 1064 nrn ND:YAG, diode pumped laser with a 8 nanosecond pulse width, a pulse rate of 10 Hz, and a range precision of less than 40 cm. MOLA has been operating almost continuously for over two years and obtained over 600 million measurements of the radius of Mars. Using very precise orbits for the MGS spacecraft derived from the Doppler and range tracking of MGS by the Deep Space Network a topographical map of Mars has been developed with an average radial accuracy of a meter and a horizontal accuracy of 100 meters. This topographical map has revealed a new Mars, a planet with some of the flattest areas in the solar system and one of the largest impact basins. MOLA has revealed clear evidence of the effect of past fluid action on the surface and found icecaps that contain as much water ice today as the icecap of Greenland.

Sodium Fluorescein-Guided Resection under the YELLOW 560 nm Surgical Microscope Filter in Malignant Gliomas: Our First 38 Cases Experience.

PubMed

Zhang, Ningning; Tian, Hailong; Huang, Dezhang; Meng, Xianbing; Guo, Wenqiang; Wang, Chaochao; Yin, Xin; Zhang, Hongying; Jiang, Bin; He, Zheng; Wang, Zhigang

2017-01-01

Sodium fluorescein (FL) had been safely used in fluorescence-guided microsurgery for imaging various brain tumors. Under the YELLOW 560 nm surgical microscope filter, low-dose FL as a fluorescent dye helps in visualization. Our study investigated the safety and efficacy of this innovative technique in malignant glioma (MG) patients. 38 patients suffering from MGs confirmed by pathology underwent FL-guided resection under YELLOW 560 nm surgical microscope filter. We retrospectively analyzed the clinical characters, microsurgery procedure, extent of resection, pathology of MGs, progression-free survival (PFS), and overall survival (OS). Thirty-eight patients had MGs (10 WHO grade III, 28 WHO grade IV). With YELLOW 560 nm surgical microscope filter combined with neuronavigation, sodium fluorescein-guided gross total resection (GTR) was achieved in 35 (92.1%) patients and subtotal resection in 3 (7.69%). The sensitivity and specificity of FL were 94.4% and 88.6% regardless of radiographic localization. Intraoperatively, 10 biopsies (10/28 FL[+]) showed "low" or "high" fluorescence in non-contrast-enhancement region and are also confirmed by pathology. Our data showed 6-month PFS of 92.3% and median survival of 11 months. FL-guided resection of MGs under the YELLOW 560 nm surgical microscope filter combined with neuronavigation was safe and effective, especially in non-contrast-MRI regions. It is feasible for improving the extent of resection in MGs especially during emergency cases.

Electronic structure and glass forming ability in early and late transition metal alloys

NASA Astrophysics Data System (ADS)

Babić, E.; Ristić, R.; Figueroa, I. A.; Pajić, D.; Skoko, Ž.; Zadro, K.

2018-03-01

A correlation between the change in magnetic susceptibility (Δχexp) upon crystallisation of Cu-Zr and Hf metallic glasses (MG) with their glass forming ability (GFA) observed recently, is found to apply to Cu-Ti and Zr-Ni alloys, too. In particular, small Δχexp, which reflects similar electronic structures, ES, of glassy and corresponding crystalline alloys, corresponds to high GFA. Here, we studied Δχexp for five Cu-Ti and four Cu-Zr and Ni-Zr MGs. The fully crystalline final state of all alloys was verified from X-ray diffraction patterns. The variation of GFA with composition in Cu-Ti, Cu-Zr and Cu-Hf MGs was established from the variation of the corresponding critical casting thickness, dc. Due to the absence of data for dc in Ni-Zr MGs their GFA was described using empirical criteria, such as the reduced glass transition temperature. A very good correlation between Δχexp and dc (and/or other criteria for GFA) was observed for all alloys studied. The correlation between the ES and GFA showed up best for Cu-Zr and NiZr2 alloys where direct data for the change in ES (ΔES) upon crystallisation are available. The applicability of the Δχexp (ΔES) criterion for high GFA (which provides a simple way to select the compositions with high GFA) to other metal-metal MGs (including ternary and multicomponent bulk MGs) is briefly discussed.

Meier-Gorlin syndrome: growth and secondary sexual development of a microcephalic primordial dwarfism disorder.

PubMed

de Munnik, Sonja A; Otten, Barto J; Schoots, Jeroen; Bicknell, Louise S; Aftimos, Salim; Al-Aama, Jumana Y; van Bever, Yolande; Bober, Michael B; Borm, George F; Clayton-Smith, Jill; Deal, Cheri L; Edrees, Alaa Y; Feingold, Murray; Fryer, Alan; van Hagen, Johanna M; Hennekam, Raoul C; Jansweijer, Maaike C E; Johnson, Diana; Kant, Sarina G; Opitz, John M; Ramadevi, A Radha; Reardon, Willie; Ross, Alison; Sarda, Pierre; Schrander-Stumpel, Constance T R M; Sluiter, A Erik; Temple, I Karen; Terhal, Paulien A; Toutain, Annick; Wise, Carol A; Wright, Michael; Skidmore, David L; Samuels, Mark E; Hoefsloot, Lies H; Knoers, Nine V A M; Brunner, Han G; Jackson, Andrew P; Bongers, Ernie M H F

2012-11-01

Meier-Gorlin syndrome (MGS) is a rare autosomal recessive disorder characterized by primordial dwarfism, microtia, and patellar aplasia/hypoplasia. Recently, mutations in the ORC1, ORC4, ORC6, CDT1, and CDC6 genes, encoding components of the pre-replication complex, have been identified. This complex is essential for DNA replication and therefore mutations are expected to impair cell proliferation and consequently could globally reduce growth. However, detailed growth characteristics of MGS patients have not been reported, and so this is addressed here through study of 45 MGS patients, the largest cohort worldwide. Here, we report that growth velocity (length) is impaired in MGS during pregnancy and first year of life, but, thereafter, height increases in paralleled normal reference centiles, resulting in a mean adult height of -4.5 standard deviations (SD). Height is dependent on ethnic background and underlying molecular cause, with ORC1 and ORC4 mutations causing more severe short stature and microcephaly. Growth hormone therapy (n = 9) was generally ineffective, though in two patients with significantly reduced IGF1 levels, growth was substantially improved by GH treatment, with 2SD and 3.8 SD improvement in height. Growth parameters for monitoring growth in future MGS patients are provided and as well we highlight that growth is disproportionately affected in certain structures, with growth related minor genital abnormalities (42%) and mammary hypoplasia (100%) frequently present, in addition to established effects on ears and patellar growth. Copyright © 2012 Wiley Periodicals, Inc.

Maturity group classification and maturity locus genotyping of early-maturing soybean varieties from high-latitude cold regions.

PubMed

Jia, Hongchang; Jiang, Bingjun; Wu, Cunxiang; Lu, Wencheng; Hou, Wensheng; Sun, Shi; Yan, Hongrui; Han, Tianfu

2014-01-01

With the migration of human beings, advances of agricultural sciences, evolution of planting patterns and global warming, soybeans have expanded to both tropical and high-latitude cold regions (HCRs). Unlike other regions, HCRs have much more significant and diverse photoperiods and temperature conditions over seasons or across latitudes, and HCR soybeans released there show rich diversity in maturity traits. However, HCR soybeans have not been as well classified into maturity groups (MGs) as other places. Therefore, it is necessary to identify MGs in HCRs and to genotype the maturity loci. Local varieties were collected from the northern part of Northeast China and the far-eastern region of Russia. Maturity group reference (MGR) soybeans of MGs MG000, MG00, and MG0 were used as references during field experiments. Both local varieties and MGR soybeans were planted for two years (2010-2011) in Heihe (N 50°15', E 127°27', H 168.5 m), China. The days to VE (emergence), R1 (beginning bloom) and R7 (beginning maturity) were recorded and statistically analyzed. Furthermore, some varieties were further genotyped at four molecularly-identified maturity loci E1, E2, E3 and E4. The HCR varieties were classified into MG0 or even more early-maturing. In Heihe, some varieties matured much earlier than MG000, which is the most early-maturing known MG, and clustered into a separate group. We designated the group as MG0000, following the convention of MGs. HCR soybeans had relatively stable days to beginning bloom from emergence. The HCR varieties diversified into genotypes of E1, E2, E3 and E4. These loci had different effects on maturity. HCRs diversify early-maturing MGs of soybean. MG0000, a new MG that matures much earlier than known MGs, was developed. HCR soybean breeding should focus more on shortening post-flowering reproductive growth. E1, E2, E3, and E4 function differentially.

Rapid and Sustained Antidepressant Action of the mGlu2/3 Receptor Antagonist MGS0039 in the Social Defeat Stress Model: Comparison with Ketamine.

PubMed

Dong, Chao; Zhang, Ji-Chun; Yao, Wei; Ren, Qian; Ma, Min; Yang, Chun; Chaki, Shigeyuki; Hashimoto, Kenji

2017-03-01

Similar to the N-methyl-D-aspartate receptor antagonist ketamine, the metabotropic glutamate 2/3 receptor antagonist, MGS0039, shows antidepressant effects. However, there are no reports comparing these 2 compounds in the social defeat stress model of depression. We examined the effects of MGS0039 (1 mg/kg) and ketamine (10 mg/kg) on depression-like behavior in susceptible mice after repeated social defeat stress. Protein levels of brain-derived neurotrophic factor, TrkB, phospho-TrkB, α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (GluA1), postsynaptic density protein 95, and dendritic spine density in selected brain regions were measured. In the tail suspension and forced swimming tests, both MGS0039 and ketamine significantly attenuated the increased immobility time observed in susceptible mice, compared with vehicle-treated animals, 1 or 2 days after a single dose of drug. In the sucrose preference test, both compounds significantly improved the reduced preference typically seen in susceptible mice at 3 to 7 days after a single dose of drug. Western-blot analyses showed that similar to ketamine, MGS0039 significantly attenuated the reduced brain-derived neurotrophic factor, phospho-TrkB/TrkB ratio, GluA1 and postsynaptic density protein 95 seen in the prefrontal cortex, dentate gyrus, and CA3 of the hippocampus from susceptible mice, 8 days after a single dose. Again, in a similar manner to ketamine, MGS0039 significantly attenuated the reduction of spine density in the prelimbic regions of the medial prefrontal cortex, dentate gyrus, and CA3 of the hippocampus, but not infralimbic regions of the medial prefrontal cortex and CA1, in susceptible mice 8 days after a single dose. In contrast, neither drug elicited an effect on altered brain-derived neurotrophic factor-TrkB signaling, GluA1, and postsynaptic density protein 95 levels and did not increase spine density observed in the nucleus accumbens of susceptible mice. Similar to ketamine, MGS0039 shows rapid and sustained antidepressant effects in the social defeat stress model. Long-lasting synaptogenesis in the prelimbic regions of medial prefrontal cortex, dentate gyrus, and CA3 might be implicated in this sustained antidepressant effect. © The Author 2016. Published by Oxford University Press on behalf of CINP.

Rapid and Sustained Antidepressant Action of the mGlu2/3 Receptor Antagonist MGS0039 in the Social Defeat Stress Model: Comparison with Ketamine

PubMed Central

Dong, Chao; Zhang, Ji-chun; Yao, Wei; Ren, Qian; Ma, Min; Yang, Chun; Chaki, Shigeyuki

2017-01-01

Abstract Background: Similar to the N-methyl-D-aspartate receptor antagonist ketamine, the metabotropic glutamate 2/3 receptor antagonist, MGS0039, shows antidepressant effects. However, there are no reports comparing these 2 compounds in the social defeat stress model of depression. Methods: We examined the effects of MGS0039 (1 mg/kg) and ketamine (10 mg/kg) on depression-like behavior in susceptible mice after repeated social defeat stress. Protein levels of brain-derived neurotrophic factor, TrkB, phospho-TrkB, α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (GluA1), postsynaptic density protein 95, and dendritic spine density in selected brain regions were measured. Results: In the tail suspension and forced swimming tests, both MGS0039 and ketamine significantly attenuated the increased immobility time observed in susceptible mice, compared with vehicle-treated animals, 1 or 2 days after a single dose of drug. In the sucrose preference test, both compounds significantly improved the reduced preference typically seen in susceptible mice at 3 to 7 days after a single dose of drug. Western-blot analyses showed that similar to ketamine, MGS0039 significantly attenuated the reduced brain-derived neurotrophic factor, phospho-TrkB/TrkB ratio, GluA1 and postsynaptic density protein 95 seen in the prefrontal cortex, dentate gyrus, and CA3 of the hippocampus from susceptible mice, 8 days after a single dose. Again, in a similar manner to ketamine, MGS0039 significantly attenuated the reduction of spine density in the prelimbic regions of the medial prefrontal cortex, dentate gyrus, and CA3 of the hippocampus, but not infralimbic regions of the medial prefrontal cortex and CA1, in susceptible mice 8 days after a single dose. In contrast, neither drug elicited an effect on altered brain-derived neurotrophic factor-TrkB signaling, GluA1, and postsynaptic density protein 95 levels and did not increase spine density observed in the nucleus accumbens of susceptible mice. Conclusions: Similar to ketamine, MGS0039 shows rapid and sustained antidepressant effects in the social defeat stress model. Long-lasting synaptogenesis in the prelimbic regions of medial prefrontal cortex, dentate gyrus, and CA3 might be implicated in this sustained antidepressant effect. PMID:27765808

The MGS Avionics System Architecture: Exploring the Limits of Inheritance

NASA Technical Reports Server (NTRS)

Bunker, R.

1994-01-01

Mars Global Surveyor (MGS) avionics system architecture comprises much of the electronics on board the spacecraft: electrical power, attitude and articulation control, command and data handling, telecommunications, and flight software. Schedule and cost constraints dictated a mix of new and inherited designs, especially hardware upgrades based on findings of the Mars Observer failure review boards.

Applications of MGS MOC and MOLA Data to Lava Flows: Investigations of Rheology, Topographic Influences and Tectonic Effects

NASA Technical Reports Server (NTRS)

Glaze, Lori S.

2004-01-01

Proxemy Research had a grant from NASA to perform scientific research using Mars Global Surveyor (MGS) data to study lava flows on Mars. Here we summarize the scientific progress and accomplishments of this grant. Scientific publications and abstracts of presentations are indicated in the final section.

MOLA: The Future of Mars Global Cartography

NASA Technical Reports Server (NTRS)

Duxbury, T. C.; Smith, D. E.; Zuber, M. T.; Frey, H. V.; Garvin, J. B.; Head, J. W.; Muhleman, D. O.; Pettengill, G. H.; Phillips, R. J.; Solomon, S. C.

1999-01-01

The MGS Orbiter is carrying the high-precision Mars Orbiter Laser Altimeter (MOLA) which, when combined with precision reconstructed orbital data and telemetered attitude data, provides a tie between inertial space and Mars-fixed coordinates to an accuracy of 100 m in latitude / longitude and 10 m in radius (1 sigma), orders of magnitude more accurate than previous global geodetic/ cartographic control data. Over the 2 year MGS mission lifetime, it is expected that over 30,000 MOLA Global Cartographic Control Points will be produced to form the basis for new and re-derived map and geodetic products, key to the analysis of existing and evolving MGS data as well as future Mars exploration. Additional information is contained in the original extended abstract.

Certification of windshear performance with RTCA class D radomes

NASA Technical Reports Server (NTRS)

Mathews, Bruce D.; Miller, Fran; Rittenhouse, Kirk; Barnett, Lee; Rowe, William

1994-01-01

Superposition testing of detection range performance forms a digital signal for input into a simulation of signal and data processing equipment and algorithms to be employed in a sensor system for advanced warning of hazardous windshear. For suitable pulse-Doppler radar, recording of the digital data at the input to the digital signal processor furnishes a realistic operational scenario and environmentally responsive clutter signal including all sidelobe clutter, ground moving target indications (GMTI), and large signal spurious due to mainbeam clutter and/or RFI respective of the urban airport clutter and aircraft scenarios (approach and landing antenna pointing). For linear radar system processes, a signal at the same point in the process from a hazard phenomena may be calculated from models of the scattering phenomena, for example, as represented in fine 3 dimensional reflectivity and velocity grid structures. Superposition testing furnishes a competing signal environment for detection and warning time performance confirmation of phenomena uncontrollable in a natural environment.

Modified superposition: A simple time series approach to closed-loop manual controller identification

NASA Technical Reports Server (NTRS)

Biezad, D. J.; Schmidt, D. K.; Leban, F.; Mashiko, S.

1986-01-01

Single-channel pilot manual control output in closed-tracking tasks is modeled in terms of linear discrete transfer functions which are parsimonious and guaranteed stable. The transfer functions are found by applying a modified super-position time series generation technique. A Levinson-Durbin algorithm is used to determine the filter which prewhitens the input and a projective (least squares) fit of pulse response estimates is used to guarantee identified model stability. Results from two case studies are compared to previous findings, where the source of data are relatively short data records, approximately 25 seconds long. Time delay effects and pilot seasonalities are discussed and analyzed. It is concluded that single-channel time series controller modeling is feasible on short records, and that it is important for the analyst to determine a criterion for best time domain fit which allows association of model parameter values, such as pure time delay, with actual physical and physiological constraints. The purpose of the modeling is thus paramount.

Water Ice Clouds in the Martian Atmosphere: A View from MGS TES

NASA Technical Reports Server (NTRS)

Hale, A. S.; Tamppari, L. K.; Christensen, P. R.; Smith, M. D.; Bass, Deborah; Qu, Zheng; Pearl, J. C.

2005-01-01

We use the method of Tamppari et al. to map water ice clouds in the Martian atmosphere. This technique was originally developed to analyze the broadband Viking IRTM channels and we have now applied it to the TES data. To do this, the TES spectra are convolved to the IRTM bandshapes and spatial resolutions, enabling use of the same processing techniques as were used in Tamppari et al.. This retrieval technique relies on using the temperature difference recorded in the 20 micron and 11 micron IRTM bands (or IRTM convolved TES bands) to map cold water ice clouds above the warmer Martian surface. Careful removal of surface contributions to the observed radiance is therefore necessary, and we have used both older Viking-derived basemaps of the surface emissivity and albedo, and new MGS derived basemaps in order the explore any possible differences on cloud retrieval due to differences in surface contribution removal. These results will be presented in our poster. Our previous work has concentrated primarily on comparing MGS TES to Viking data; that work saw that large-scale cloud features, such as the aphelion cloud belt, are quite repeatable from year to year, though small scale behavior shows some variation. Comparison of Viking and MGS era cloud maps will be presented in our poster. In the current stage of our study, we have concentrated our efforts on close analysis of water ice cloud behavior in the northern summer of the three MGS mapping years on relatively small spatial scales, and present our results below. Additional information is included in the original extended abstract.

Improving manual skills in persons with disabilities (PWD) through a multimodal assistance system.

PubMed

Covarrubias, Mario; Gatti, Elia; Bordegoni, Monica; Cugini, Umberto; Mansutti, Alessandro

2014-07-01

In this research work, we present a Multimodal Guidance System (MGS) whose aim is to provide dynamic assistance to persons with disabilities (PWD) while performing manual activities such as drawing, coloring in and foam-cutting tasks. The MGS provides robotic assistance in the execution of 2D tasks through haptic and sound interactions. Haptic technology provides the virtual path of 2D shapes through the point-based approach, while sound technology provides audio feedback inputs related to the hand's velocity while sketching and filling or cutting operations. By combining this Multimodal System with the haptic assistance, we have created a new approach with possible applications to such diverse fields as physical rehabilitation, scientific investigation of sensorimotor learning and assessment of hand movements in PWD. The MGS has been tested by people with specific disorders affecting coordination, such as Down syndrome and developmental disabilities, under the supervision of their teachers and care assistants inside their learning environment. A Graphic User Interface has been designed for teachers and care assistants in order to provide training during the test sessions. Our results provide conclusive evidence that the effect of using the MGS increases the accuracy in the tasks operations. The Multimodal Guidance System (MGS) is an interface that offers haptic and sound feedback while performing manual tasks. Several studies demonstrated that the haptic guidance systems can help people in recovering cognitive function at different levels of complexity and impairment. The applications supported by our device could also have an important role in supporting physical therapist and cognitive psychologist in helping patients to recover motor and visuo-spatial abilities.

Burden of vaccine preventable diseases at large events.

PubMed

Alqahtani, Amani S; Alfelali, Mohammad; Arbon, Paul; Booy, Robert; Rashid, Harunor

2015-11-27

Large events or mass gatherings (MGs) are known to amplify the risk of infectious diseases, many of which can be prevented by vaccination. In this review we have evaluated the burden of vaccine preventable diseases (VPDs) in MGs. Major databases like PubMed and Embase, Google Scholar and pertinent websites were searched by using MeSH terms and text words; this was supplemented by hand searching. Following data abstraction, the pooled estimate of the burden of VPDs was calculated when possible; otherwise a narrative synthesis was conducted. In the past, at religious MGs like Hajj and Kumbh Mela, cholera caused explosive outbreaks; but currently respiratory infections, notably influenza, are the commonest diseases not only at Hajj but also at World Youth Day and Winter Olympiad. The recent cumulative attack rate of influenza at Hajj is 8.7% (range 0.7-15.8%), and the cumulative prevalence is 3.6% (range: 0.3-38%). Small outbreaks of measles (13-42 cases per event) have been reported at sport, entertainment and religious events. A sizeable outbreak (>200 cases) was reported following a special Easter Festival in Austria. An outbreak of hepatitis A occurred following the 'Jam bands' music festival. Other VPDs including pneumococcal disease, pertussis and tuberculosis have been reported in relation to MG attendance. VPDs not only affect the participants of MGs but also their contacts; vaccine uptake is variable and vaccine implementation is likely to have beneficial effects. Research to address the knowledge gaps surrounding VPDs at MGs is needed. Copyright © 2015 Elsevier Ltd. All rights reserved.

Sodium Fluorescein-Guided Resection under the YELLOW 560 nm Surgical Microscope Filter in Malignant Gliomas: Our First 38 Cases Experience

PubMed Central

Tian, Hailong; Huang, Dezhang; Meng, Xianbing; Guo, Wenqiang; Wang, Chaochao; Yin, Xin; Zhang, Hongying; Jiang, Bin; He, Zheng

2017-01-01

Objective Sodium fluorescein (FL) had been safely used in fluorescence-guided microsurgery for imaging various brain tumors. Under the YELLOW 560 nm surgical microscope filter, low-dose FL as a fluorescent dye helps in visualization. Our study investigated the safety and efficacy of this innovative technique in malignant glioma (MG) patients. Patients and Method 38 patients suffering from MGs confirmed by pathology underwent FL-guided resection under YELLOW 560 nm surgical microscope filter. We retrospectively analyzed the clinical characters, microsurgery procedure, extent of resection, pathology of MGs, progression-free survival (PFS), and overall survival (OS). Results Thirty-eight patients had MGs (10 WHO grade III, 28 WHO grade IV). With YELLOW 560 nm surgical microscope filter combined with neuronavigation, sodium fluorescein-guided gross total resection (GTR) was achieved in 35 (92.1%) patients and subtotal resection in 3 (7.69%). The sensitivity and specificity of FL were 94.4% and 88.6% regardless of radiographic localization. Intraoperatively, 10 biopsies (10/28 FL[+]) showed “low” or “high” fluorescence in non-contrast-enhancement region and are also confirmed by pathology. Our data showed 6-month PFS of 92.3% and median survival of 11 months. Conclusion FL-guided resection of MGs under the YELLOW 560 nm surgical microscope filter combined with neuronavigation was safe and effective, especially in non-contrast-MRI regions. It is feasible for improving the extent of resection in MGs especially during emergency cases. PMID:29124069

Utopia Cracks and Polygons

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-339, 23 April 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a pattern of polygonal cracks and aligned, elliptical pits in western Utopia Planitia. The picture covers an area about 3 km (about 1.9 mi) wide near 44.9oN, 274.7oW. Sunlight illuminates the scene from the left.

Report of the IAU Working Group on Cartographic Coordinates and Rotational Elements: 2009

DTIC Science & Technology

2011-01-01

normal passes through P and by the height (h) of P above P ′. The topographic reference surface of Mars is that specified in the final MOLA Mission...System, MGS-M- MOLA -5-MEG- DR-L3-V1.0, 2003. Available on-line from http://pds-geosciences.wustl.edu/missions/mgs/megdr.html. Accessed 2010 October 18

Photometric and Spectroscopic Footprint Corrections in the Sloan Digital Sky Survey’s 6th Data Release

NASA Astrophysics Data System (ADS)

Specian, Mike A.; Szalay, Alex S.

2016-04-01

We identify and correct numerous errors within the photometric and spectroscopic footprints (SFs) of the Sloan Digital Sky Survey’s (SDSS) 6th data release (DR6). Within the SDSS’s boundaries hundreds of millions of objects have been detected. Yet we present evidence that the boundaries themselves contain a significant number of mistakes that are being revealed for the first time within this paper. Left unaddressed, these can introduce systematic biases into galaxy clustering statistics. Using the DR6 Main Galaxy Sample (MGS) targets as tracers, we reveal inconsistencies between the photometric and SF definitions provided in the Catalog Archive Server (CAS), and the measurements of targets therein. First, we find that 19.7 deg2 of the DR6 photometric footprint are devoid of MGS targets. In volumes of radii 7 {h}-1 {Mpc}, this can cause errors in the expected number of galaxies to exceed 60%. Second, we identify seven areas that were erroneously included or excluded from the SF. Moreover, the tiling algorithm that positioned spectroscopic fibers during and between DRs caused many areas along the edge of the SF to be significantly undersampled relative to the footprint’s interior. Through our corrections, we increase the completeness 2.2% by trimming 3.6% of the area from the existing SF. The sum total of these efforts has generated the most accurate description of the SDSS DR6 footprints ever created.

TRPV1 agonist monoacylglycerol increases UCP1 content in brown adipose tissue and suppresses accumulation of visceral fat in mice fed a high-fat and high-sucrose diet.

PubMed

Iwasaki, Yusaku; Tamura, Yasuko; Inayoshi, Kimiko; Narukawa, Masataka; Kobata, Kenji; Chiba, Hiroshige; Muraki, Etsuko; Tsunoda, Nobuyo; Watanabe, Tatsuo

2011-01-01

The administration of such a transient receptor potential vanilloid 1 (TRPV1) agonist as capsaicin, which is a pungent ingredient of red pepper, promotes energy metabolism and suppresses visceral fat accumulation. We have recently identified monoacylglycerols (MGs) having an unsaturated long-chain fatty acid as the novel TRPV1 agonist in foods. We investigated in this present study the effects of dietary MGs on uncoupling protein 1 (UCP1) expression in interscapular brown adipose tissue (IBAT) and on fat accumulation in mice fed with a high-fat, high-sucrose diet. The MG30 diet that substituted 30% of all lipids for MGs (a mixture of 1-oleoylglycerol, 1-linoleoylglycerol and 1-linolenoylglycerol) significantly increased the UCP1 content of IBAT and decreased the weight of epididymal white adipose tissue, and the serum glucose, total cholesterol and free fatty acid levels. The diet containing only 1-oleoylglycerol as MG also increased UCP1 expression in IBAT. MGs that activated TRPV1 also therefore induced the expression of UCP 1 and prevented visceral fat accumulation as well as capsaicin.

Gas adsorption in Mg-porphyrin-based porous organic frameworks: A computational simulation by first-principles derived force field.

PubMed

Pang, Yujia; Li, Wenliang; Zhang, Jingping

2017-09-15

A novel type of porous organic frameworks, based on Mg-porphyrin, with diamond-like topology, named POF-Mgs is computationally designed, and the gas uptakes of CO 2 , H 2 , N 2 , and H 2 O in POF-Mgs are investigated by Grand canonical Monte Carlo simulations based on first-principles derived force fields (FF). The FF, which describes the interactions between POF-Mgs and gases, are fitted by dispersion corrected double-hybrid density functional theory, B2PLYP-D3. The good agreement between the obtained FF and the first-principle energies data confirms the reliability of the FF. Furthermore our simulation shows the presence of a small amount of H 2 O (≤ 0.01 kPa) does not much affect the adsorption quantity of CO 2 , but the presence of higher partial pressure of H 2 O (≥ 0.1 kPa) results in the CO 2 adsorption decrease significantly. The good performance of POF-Mgs in the simulation inspires us to design novel porous materials experimentally for gas adsorption and purification. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Feasibility Studies for Production of Pellet Grade Concentrate from Sub Grade Iron Ore Using Multi Gravity Separator

NASA Astrophysics Data System (ADS)

Rao, Gottumukkala Venkateswara; Markandeya, R.; Kumar, Rajan

2018-04-01

An attempt has been made to utilise Sub Grade Iron Ore by producing pellet grade concentrate from Deposit 5, Bacheli Complex, Bailadila, Chhattisgarh, India. The `as received' Run of Mine (ROM) sample assayed 40.80% Fe, 40.90% SiO2. Mineralogical studies indicated that the main ore mineral is Hematite and lone gangue mineral is Quartz. Mineral liberation studies indicated that, the ore mineral Hematite and gangue mineral Quartz are getting liberated below 100 microns. The stage crushed and ground sample was subjected to concentration by using a Multi Gravity Separator (MGS). Rougher Multi Gravity Separation (MGS) experimental results were optimised to recover highest possible iron values. A concentrate of 55.80% Fe with a yield of 61.73% by weight with a recovery of 84.42% Iron values was obtained in rougher MGS concentrate. Further experiments were carried out with rougher MGS concentrate to produce a concentrate suitable for commercial grade pellet concentrate. It was proved that a concentrate assaying 66.67% Fe, 3.12% SiO2 with an yield of 45.08% by weight and with a recovery of 73.67% iron values in the concentrate.

The impact of low-Z and high-Z metal implants in IMRT: A Monte Carlo study of dose inaccuracies in commercial dose algorithms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Spadea, Maria Francesca, E-mail: mfspadea@unicz.it; Verburg, Joost Mathias; Seco, Joao

2014-01-15

Purpose: The aim of the study was to evaluate the dosimetric impact of low-Z and high-Z metallic implants on IMRT plans. Methods: Computed tomography (CT) scans of three patients were analyzed to study effects due to the presence of Titanium (low-Z), Platinum and Gold (high-Z) inserts. To eliminate artifacts in CT images, a sinogram-based metal artifact reduction algorithm was applied. IMRT dose calculations were performed on both the uncorrected and corrected images using a commercial planning system (convolution/superposition algorithm) and an in-house Monte Carlo platform. Dose differences between uncorrected and corrected datasets were computed and analyzed using gamma index (Pγ{submore » <1}) and setting 2 mm and 2% as distance to agreement and dose difference criteria, respectively. Beam specific depth dose profiles across the metal were also examined. Results: Dose discrepancies between corrected and uncorrected datasets were not significant for low-Z material. High-Z materials caused under-dosage of 20%–25% in the region surrounding the metal and over dosage of 10%–15% downstream of the hardware. Gamma index test yielded Pγ{sub <1}>99% for all low-Z cases; while for high-Z cases it returned 91% < Pγ{sub <1}< 99%. Analysis of the depth dose curve of a single beam for low-Z cases revealed that, although the dose attenuation is altered inside the metal, it does not differ downstream of the insert. However, for high-Z metal implants the dose is increased up to 10%–12% around the insert. In addition, Monte Carlo method was more sensitive to the presence of metal inserts than superposition/convolution algorithm. Conclusions: The reduction in terms of dose of metal artifacts in CT images is relevant for high-Z implants. In this case, dose distribution should be calculated using Monte Carlo algorithms, given their superior accuracy in dose modeling in and around the metal. In addition, the knowledge of the composition of metal inserts improves the accuracy of the Monte Carlo dose calculation significantly.« less

Role of mouthguards in reducing mild traumatic brain injury/concussion incidence in high school football athletes.

PubMed

Winters, Jackson; DeMont, Richard

2014-01-01

There is continued speculation on the value of mouthguards (MGs) in preventing mild traumatic brain injury (MTBI)/concussion injuries. The purpose of this randomized prospective study was to compare the impact of pressure-laminated (LM), custom-made, properly fitted MGs to over-the-counter (OTC) MGs on the MTBI/concussion incidence in high school football athletes over a season of play. Four hundred twelve players from 6 high school football teams were included in the study. Twenty-four MTBI/concussion injuries (5.8%) were recorded. When examining the MTBI/concussion injury rate by MG type, there was a significant difference (P = 0.0423) with incidence rates of 3.6% and 8.3% in the LM MG and OTC MG groups, respectively.

Mars' gravity field and upper atmosphere with MGS, Mars Odyssey, and MRO radio science data

NASA Astrophysics Data System (ADS)

Genova, Antonio; Goossens, Sander J.; Lemoine, Frank G.; Mazarico, Erwan; Smith, David E.; Zuber, Maria T.

2015-04-01

The Mars exploration program conducted by NASA during the last decade has enabled continuous observations of the planet from orbit with three different missions: the Mars Global Surveyor (MGS), Mars Odyssey (ODY), and the Mars Reconnaissance Orbiter (MRO). These spacecraft were equipped with on board instrumentation dedicated to collect radio tracking data in the X-band. The analysis of these data has provided a high-resolution gravity field model of Mars. MGS and ODY were inserted into two separate frozen sun-synchronous, near-circular, polar orbits with different local times, with their periapsis altitude at ~370 km and ~390 km, respectively. MGS was in orbit around Mars between 1999 and 2006, whereas ODY has been orbiting the planet since January 2002. Using the radio science data of these two spacecraft, gravity models with a maximum resolution of degree and order 95 in spherical harmonics (spatial resolution of 112 km) have been determined. MRO has been orbiting Mars since August 2006 in a frozen sun-synchronous orbit with a periapsis at 255 km altitude. Therefore, its radio data helped significantly improve Mars' gravity field model, up to degree and order 110 (spatial resolution of 96 km). However, mismodeling of the atmospheric drag, which is the strongest non-conservative force acting on the spacecraft at MRO's low altitude, compromises the estimation of the temporal variations of the gravity field zonal harmonics that provide crucial information on the seasonal mass of carbon dioxide in the polar caps. For this reason, we implemented the Drag Temperature Model (DTM)-Mars model (Bruinsma and Lemoine 2002) into our Precise Orbit Determination (POD) program GEODYN-II. We estimated key model parameters to adequately reproduce variations in temperatures and (partial) density along the spacecraft trajectories. Our new model allows us to directly estimate the long-term periodicity of the major constituents at MGS, ODY, and MRO altitudes (~255-450 km). In this region of the Martian upper atmosphere, CO2, O, and He represent the dominant species. MRO data primarily determine the annual and semi-annual variability of CO2 and O since these two elements are the major constituents along its orbit. MGS and ODY sample altitudes where He is the most abundant species and thus they help constrain the long-term variations of O. We will present an update on the DTM-Mars model using MGS, ODY, and MRO radio science data. The improved atmospheric model provides a better prediction of the long-term variability of the dominant species. Therefore, the inclusion of the recovered model leads to improved orbit determination and an improved gravity field model of Mars using MGS, ODY, and MRO radio tracking data. The solution will be especially based on 8 years of MRO data from August 2006 to June 2014.

Torsion effect of swing frame on the measurement of horizontal two-plane balancing machine

NASA Astrophysics Data System (ADS)

Wang, Qiuxiao; Wang, Dequan; He, Bin; Jiang, Pan; Wu, Zhaofu; Fu, Xiaoyan

2017-03-01

In this paper, the vibration model of swing frame of two-plane balancing machine is established to calculate the vibration center position of swing frame first. The torsional stiffness formula of spring plate twisting around the vibration center is then deduced by using superposition principle. Finally, the dynamic balancing experiments prove the irrationality of A-B-C algorithm which ignores the torsion effect, and show that the torsional stiffness deduced by experiments is consistent with the torsional stiffness calculated by theory. The experimental datas show the influence of the torsion effect of swing frame on the separation ratio of sided balancing machines, which reveals the sources of measurement error and assesses the application scope of A-B-C algorithm.

Aerobraking at Venus and Mars: A Comparison of the Magellan and Mars Global Surveyor Aerobraking Phases

NASA Technical Reports Server (NTRS)

Lyons, Daniel T.

2000-01-01

On February 4, 1999 the Mars Global Surveyor spacecraft became the second spacecraft to successfully aerobrake into a nearly circular orbit about another planet. This paper will highlight some of the similarities and differences between the aerobraking phases of this mission and the first mission to use aerobraking, the Magellan mission to Venus. Although the Mars Global Surveyor (MGS) spacecraft was designed for aerobraking and the Magellan spacecraft was not, aerobraking MGS was a much more challenging task than aerobraking Magellan, primarily because the spacecraft was damaged during the initial deployment of the solar panels. The MGS aerobraking phase had to be completely redesigned to minimize the bending moment acting on a broken yoke connecting one of the solar panels to the spacecraft. Even if the MGS spacecraft was undamaged, aerobraking at Mars was more challenging than aerobraking at Venus for several reasons. First, Mars is subject to dust storms, which can significantly change the temperature of the atmosphere due to increased solar heating in the low and middle altitudes (below 50 km), which in turn can significantly increase the density at the aerobraking altitudes (above 100 km). During the first part of the MGS aerobraking phase, a regional dust storm was observed to have a significant and very rapid effect on the entire atmosphere of Mars. Computer simulations of global dust storms on Mars indicate that even larger density increases are possible than those observed during the MGS aerobraking phases. For many aerobraking missions, the duration of the aerobraking phase must be kept as short as possible to minimize the total mission cost. For Mars missions, a short aerobraking phase means that there will be less margin to accommodate atmospheric variability, so the operations team must be ready to propulsively raise periapsis by tens of kilometers on very short notice. This issue was less of a concern on Venus, where the thick lower atmosphere and the slow planet rotation resulted in more predictable atmospheric densities from one orbit to the next.

Maturity Group Classification and Maturity Locus Genotyping of Early-Maturing Soybean Varieties from High-Latitude Cold Regions

PubMed Central

Lu, Wencheng; Hou, Wensheng; Sun, Shi; Yan, Hongrui; Han, Tianfu

2014-01-01

Background With the migration of human beings, advances of agricultural sciences, evolution of planting patterns and global warming, soybeans have expanded to both tropical and high-latitude cold regions (HCRs). Unlike other regions, HCRs have much more significant and diverse photoperiods and temperature conditions over seasons or across latitudes, and HCR soybeans released there show rich diversity in maturity traits. However, HCR soybeans have not been as well classified into maturity groups (MGs) as other places. Therefore, it is necessary to identify MGs in HCRs and to genotype the maturity loci. Methods Local varieties were collected from the northern part of Northeast China and the far-eastern region of Russia. Maturity group reference (MGR) soybeans of MGs MG000, MG00, and MG0 were used as references during field experiments. Both local varieties and MGR soybeans were planted for two years (2010-2011) in Heihe (N 50°15′, E 127°27′, H 168.5 m), China. The days to VE (emergence), R1 (beginning bloom) and R7 (beginning maturity) were recorded and statistically analyzed. Furthermore, some varieties were further genotyped at four molecularly-identified maturity loci E1, E2, E3 and E4. Results The HCR varieties were classified into MG0 or even more early-maturing. In Heihe, some varieties matured much earlier than MG000, which is the most early-maturing known MG, and clustered into a separate group. We designated the group as MG0000, following the convention of MGs. HCR soybeans had relatively stable days to beginning bloom from emergence. The HCR varieties diversified into genotypes of E1, E2, E3 and E4. These loci had different effects on maturity. Conclusion HCRs diversify early-maturing MGs of soybean. MG0000, a new MG that matures much earlier than known MGs, was developed. HCR soybean breeding should focus more on shortening post-flowering reproductive growth. E1, E2, E3, and E4 function differentially. PMID:24740097

The sustained effect (12 months) of a single-dose vectored thermal pulsation procedure for meibomian gland dysfunction and evaporative dry eye.

PubMed

Blackie, Caroline A; Coleman, Christy A; Holland, Edward J

2016-01-01

To evaluate the sustained effect (up to 1 year) of a single, 12-minute vectored thermal pulsation (VTP) treatment in improving meibomian gland function and dry eye symptoms in patients with meibomian gland dysfunction and evaporative dry eye. The prospective, multicenter, open-label clinical trial included 200 subjects (400 eyes) who were randomized to a single VTP treatment (treatment group) or twice-daily, 3-month, conventional warm compress and eyelid hygiene therapy (control group). Control group subjects received crossover VTP treatment at 3 months (crossover group). Effectiveness measures of meibomian gland secretion (MGS) and dry eye symptoms were evaluated at baseline and 1, 3, 6, 9, and 12 months. Subjects with inadequate symptom relief could receive additional meibomian gland dysfunction therapy after 3 (treatment group) and 6 months (crossover group). At 3 months, the treatment group had greater mean improvement in MGS (P<0.0001) and dry eye symptoms (P=0.0068), compared to controls. At 12 months, 86% of the treatment group had received only one VTP treatment, and sustained a mean improvement in MGS from 6.4±3.7 (baseline) to 17.3±9.1 (P<0.0001) and dry eye symptoms from 44.1±20.4 to 21.6±21.3 (P<0.0001); 89% of the crossover group had received only one VTP treatment with sustained mean improvement in MGS from 6.3±3.6 to 18.4±11.1 (P<0.0001) and dry eye symptoms from 49.1±21.0 to 24.0±23.2 (P<0.0001). Greater mean improvement in MGS was associated with less severe baseline MGS (P=0.0017) and shorter duration of time between diagnosis and treatment (P=0.0378). A single VTP treatment can deliver a sustained mean improvement in meibomian gland function and mean reduction in dry eye symptoms, over 12 months. A single VTP treatment provides significantly greater mean improvement in meibomian gland function and dry eye symptoms as compared to a conventional, twice-daily, 3-month regimen. Early VTP intervention for meibomian gland dysfunction is associated with improved treatment outcomes.

Wave-Modulated CO2 Condensation in Mars' Polar Atmosphere From MGS/TES & MOLA and MRO/MCS.

NASA Astrophysics Data System (ADS)

Banfield, D. J.

2016-12-01

In Mars' polar night, atmospheric temperatures fall low enough to cause CO2 condensation. This has been empirically demonstrated by Mars Global Surveyor's (MGS) Mars Orbiter Laser Altimeter (MOLA), which identified reflections from above the surface, and MGS Radio Science (RS) and Thermal Emission Spectrometer (TES) and Mars Reconnaissance Orbiter's (MRO) Mars Climate Sounder (MCS), all of which showed polar night temperature profiles that were super-saturated. Detailed analysis of TES temperature profiles as well as numerical modeling both suggest that the stationary and traveling waves on the polar vortices are strong enough to significantly modulate the CO2 cloud condensation. However the extent to which this is actually occurring has not been quantified. The polar night CO2 condensation represents a significant amount of energy deposition, even if it were uniformly distributed. If instead it is concentrated in the cold sectors of the various waves, this can be a tremendous perturbation not only to the wave amplitudes (clipping them from going much below the CO2 condensation temperature), but also impacting their ability to transport heat and momentum poleward and upward, and thus it may also impact the maintenance and shape of the polar vortex itself. Mars' polar vortices remain barotropically unstable throughout the winter in spite of large amplitude waves in their vicinity. We have identified when and where the various waves (with their specific amplitudes and phases) in the vicinity of the polar vortex should modulate the CO2 condensation (see Figure of a meridional cross-section showing where no clouds are expected (blue), clouds should be ubiquitous (green) and waves should be required to form clouds (red)). We have also correlated this with the distribution of the actual observed cloud identifications from MGS MOLA and MRO MCS. We find only poor correlations between the MGS/TES identified wave modulated condensation predictions and actual simultaneous cloud identifications from MGS/MOLA. We will discuss the results of a similar study using only MRO/MCS to analyze the mean atmospheric temperature, the stationary and traveling waves along the polar vortex, and the actual locations where CO2 condensation is evident.

Zebrafish cdc6 hypomorphic mutation causes Meier-Gorlin syndrome-like phenotype.

PubMed

Yao, Likun; Chen, Jing; Wu, Xiaotong; Jia, Shunji; Meng, Anming

2017-11-01

Cell Division Cycle 6 (Cdc6) is a component of pre-replicative complex (preRC) forming on DNA replication origins in eukaryotes. Recessive mutations in ORC1, ORC4, ORC6, CDT1 or CDC6 of the preRC in human cause Meier-Gorlin syndrome (MGS) that is characterized by impaired post-natal growth, short stature and microcephaly. However, vertebrate models of MGS have not been reported. Through N-ethyl-N-nitrosourea mutagenesis and Cas9 knockout, we generate several cdc6 mutant lines in zebrafish. Loss-of-function mutations of cdc6, as manifested by cdc6tsu4305 and cdc6tsu7cd mutants, lead to embryonic lethality due to cell cycle arrest at the S phase and extensive apoptosis. Embryos homozygous for a cdc6 hypomorphic mutation, cdc6tsu21cd, develop normally during embryogenesis. Later on, compared with their wild-type (WT) siblings, cdc6tsu21cd mutant fish show growth retardation, and their body weight and length in adulthood are greatly reduced, which resemble human MGS. Surprisingly, cdc6tsu21cd mutant fish become males with a short life and fail to mate with WT females, suggesting defective reproduction. Overexpression of Cdc6 mutant forms, which mimic human CDC6(T323R) mutation found in a MGS patient, in zebrafish cdc6tsu4305 mutant embryos partially represses cell death phenotype, suggesting that the human CDC6(T323R) mutation is a hypomorph. cdc6tsu21cd mutant fish will be useful to detect more tissue defects and develop medical treatment strategies for MGS patients. © The Author 2017. Published by Oxford University Press.

Mutations in CDC45, Encoding an Essential Component of the Pre-initiation Complex, Cause Meier-Gorlin Syndrome and Craniosynostosis.

PubMed

Fenwick, Aimee L; Kliszczak, Maciej; Cooper, Fay; Murray, Jennie; Sanchez-Pulido, Luis; Twigg, Stephen R F; Goriely, Anne; McGowan, Simon J; Miller, Kerry A; Taylor, Indira B; Logan, Clare; Bozdogan, Sevcan; Danda, Sumita; Dixon, Joanne; Elsayed, Solaf M; Elsobky, Ezzat; Gardham, Alice; Hoffer, Mariette J V; Koopmans, Marije; McDonald-McGinn, Donna M; Santen, Gijs W E; Savarirayan, Ravi; de Silva, Deepthi; Vanakker, Olivier; Wall, Steven A; Wilson, Louise C; Yuregir, Ozge Ozalp; Zackai, Elaine H; Ponting, Chris P; Jackson, Andrew P; Wilkie, Andrew O M; Niedzwiedz, Wojciech; Bicknell, Louise S

2016-07-07

DNA replication precisely duplicates the genome to ensure stable inheritance of genetic information. Impaired licensing of origins of replication during the G1 phase of the cell cycle has been implicated in Meier-Gorlin syndrome (MGS), a disorder defined by the triad of short stature, microtia, and a/hypoplastic patellae. Biallelic partial loss-of-function mutations in multiple components of the pre-replication complex (preRC; ORC1, ORC4, ORC6, CDT1, or CDC6) as well as de novo stabilizing mutations in the licensing inhibitor, GMNN, cause MGS. Here we report the identification of mutations in CDC45 in 15 affected individuals from 12 families with MGS and/or craniosynostosis. CDC45 encodes a component of both the pre-initiation (preIC) and CMG helicase complexes, required for initiation of DNA replication origin firing and ongoing DNA synthesis during S-phase itself, respectively, and hence is functionally distinct from previously identified MGS-associated genes. The phenotypes of affected individuals range from syndromic coronal craniosynostosis to severe growth restriction, fulfilling diagnostic criteria for Meier-Gorlin syndrome. All mutations identified were biallelic and included synonymous mutations altering splicing of physiological CDC45 transcripts, as well as amino acid substitutions expected to result in partial loss of function. Functionally, mutations reduce levels of full-length transcripts and protein in subject cells, consistent with partial loss of CDC45 function and a predicted limited rate of DNA replication and cell proliferation. Our findings therefore implicate the preIC as an additional protein complex involved in the etiology of MGS and connect the core cellular machinery of genome replication with growth, chondrogenesis, and cranial suture homeostasis. Copyright © 2016 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

Meier–Gorlin syndrome genotype–phenotype studies: 35 individuals with pre-replication complex gene mutations and 10 without molecular diagnosis

PubMed Central

de Munnik, Sonja A; Bicknell, Louise S; Aftimos, Salim; Al-Aama, Jumana Y; van Bever, Yolande; Bober, Michael B; Clayton-Smith, Jill; Edrees, Alaa Y; Feingold, Murray; Fryer, Alan; van Hagen, Johanna M; Hennekam, Raoul C; Jansweijer, Maaike C E; Johnson, Diana; Kant, Sarina G; Opitz, John M; Ramadevi, A Radha; Reardon, Willie; Ross, Alison; Sarda, Pierre; Schrander-Stumpel, Constance T R M; Schoots, Jeroen; Temple, I Karen; Terhal, Paulien A; Toutain, Annick; Wise, Carol A; Wright, Michael; Skidmore, David L; Samuels, Mark E; Hoefsloot, Lies H; Knoers, Nine V A M; Brunner, Han G; Jackson, Andrew P; Bongers, Ernie M H F

2012-01-01

Meier–Gorlin syndrome (MGS) is an autosomal recessive disorder characterized by microtia, patellar aplasia/hypoplasia, and short stature. Recently, mutations in five genes from the pre-replication complex (ORC1, ORC4, ORC6, CDT1, and CDC6), crucial in cell-cycle progression and growth, were identified in individuals with MGS. Here, we report on genotype–phenotype studies in 45 individuals with MGS (27 females, 18 males; age 3 months–47 years). Thirty-five individuals had biallelic mutations in one of the five causative pre-replication genes. No homozygous or compound heterozygous null mutations were detected. In 10 individuals, no definitive molecular diagnosis was made. The triad of microtia, absent/hypoplastic patellae, and short stature was observed in 82% of individuals with MGS. Additional frequent clinical features were mammary hypoplasia (100%) and abnormal genitalia (42% predominantly cryptorchidism and hypoplastic labia minora/majora). One individual with ORC1 mutations only had short stature, emphasizing the highly variable clinical spectrum of MGS. Individuals with ORC1 mutations had significantly shorter stature and smaller head circumferences than individuals from other gene categories. Furthermore, compared with homozygous missense mutations, compound heterozygous mutations appeared to have a more severe effect on phenotype, causing more severe growth retardation in ORC4 and more frequently pulmonary emphysema in CDT1. A lethal phenotype was seen in four individuals with compound heterozygous ORC1 and CDT1 mutations. No other clear genotype–phenotype association was observed. Growth hormone and estrogen treatment may be of some benefit, respectively, to growth retardation and breast hypoplasia, though further studies in this patient group are needed. PMID:22333897

Preliminary Global Topographic Model of Mars Based on MOLA Altimetry, Earth-Based Radar, and Viking, Mariner and MGS Occultations

NASA Technical Reports Server (NTRS)

Smith, David E.; Zuber, Maria T.; Neumann, Gregory A.

1999-01-01

The recent altimetry data acquired by MOLA over the northern hemisphere of Mars have been combined with the Earth-based radar data obtained between 1971 and 1982, and occultation measurements of the Viking 1 and 2 Orbiters, Mariner 9, and MGS to derive a global model of the shape and topography of Mars. This preliminary model has a horizontal resolution of about 300 km. Vertical accuracy is on average a few hundred meters in the region of the data. Datasets: The altimetry and radar datasets were individually binned in 1.25 degree grids and merged with the occultation data. The Viking and Mariner occultation data in the northern hemisphere were excluded from the combined dataset where MOLA altimetry were available. The laser altimetry provided extensive and almost complete coverage of the northern hemisphere north of latitude 30 while the radar provided longitudinal coverage at several latitude bands between 23N and 23S. South of this region the only data were occultations. The majority of the occultations were obtained from Mariner 9, and the rest from Viking 1 & 2, and MGS. Earlier studies had shown that the Viking and Mariner occultations were on average only accurate to 500 meters. The recent MGS occultations are accurate to a few tens of meters. However, the highest southern latitude reached by the MGS occultations is only about 64S and data near the target region for the Mars 98 lander is limited to a few Viking and Mariner observations of relatively poor quality. In addition to the above datasets the locations of the Viking 1, Viking 2, and Pathfinder landers, obtained from the radio tracking of their signals, were included.

Genome-wide association study of clinical dimensions of schizophrenia: polygenic effect on disorganized symptoms.

PubMed

Fanous, Ayman H; Zhou, Baiyu; Aggen, Steven H; Bergen, Sarah E; Amdur, Richard L; Duan, Jubao; Sanders, Alan R; Shi, Jianxin; Mowry, Bryan J; Olincy, Ann; Amin, Farooq; Cloninger, C Robert; Silverman, Jeremy M; Buccola, Nancy G; Byerley, William F; Black, Donald W; Freedman, Robert; Dudbridge, Frank; Holmans, Peter A; Ripke, Stephan; Gejman, Pablo V; Kendler, Kenneth S; Levinson, Douglas F

2012-12-01

Multiple sources of evidence suggest that genetic factors influence variation in clinical features of schizophrenia. The authors present the first genome-wide association study (GWAS) of dimensional symptom scores among individuals with schizophrenia. Based on the Lifetime Dimensions of Psychosis Scale ratings of 2,454 case subjects of European ancestry from the Molecular Genetics of Schizophrenia (MGS) sample, three symptom factors (positive, negative/disorganized, and mood) were identified with exploratory factor analysis. Quantitative scores for each factor from a confirmatory factor analysis were analyzed for association with 696,491 single-nucleotide polymorphisms (SNPs) using linear regression, with correction for age, sex, clinical site, and ancestry. Polygenic score analysis was carried out to determine whether case and comparison subjects in 16 Psychiatric GWAS Consortium (PGC) schizophrenia samples (excluding MGS samples) differed in scores computed by weighting their genotypes by MGS association test results for each symptom factor. No genome-wide significant associations were observed between SNPs and factor scores. Most of the SNPs producing the strongest evidence for association were in or near genes involved in neurodevelopment, neuroprotection, or neurotransmission, including genes playing a role in Mendelian CNS diseases, but no statistically significant effect was observed for any defined gene pathway. Finally, polygenic scores based on MGS GWAS results for the negative/disorganized factor were significantly different between case and comparison subjects in the PGC data set; for MGS subjects, negative/disorganized factor scores were correlated with polygenic scores generated using case-control GWAS results from the other PGC samples. The polygenic signal that has been observed in cross-sample analyses of schizophrenia GWAS data sets could be in part related to genetic effects on negative and disorganized symptoms (i.e., core features of chronic schizophrenia).

What is a meaningful change in physical performance? Findings from a clinical trial in older adults (the LIFE-P study).

PubMed

Kwon, S; Perera, S; Pahor, M; Katula, J A; King, A C; Groessl, E J; Studenski, S A

2009-06-01

Performance measures provide important information, but the meaning of change in these measures is not well known. The purpose of this research is to 1) examine the effect of treatment assignment on the relationship between self-report and performance; 2) to estimate the magnitude of meaningful change in 400-meter walk time (400MWT), 4-meter gait speed (4MGS), and Short Physical Performance Battery (SPPB) and 3) to evaluate the effect of direction of change on estimates of magnitude. This is a secondary analysis of data from the LIFE-P study, a single blinded randomized clinical trial. Using change over one year, we applied distribution-based and anchor-based methods for self-reported mobility to estimate minimally important and substantial change in 400MWT, 4MGS and SPPB. Four university-based clinical research sites. Sedentary adults aged 70-89 whose SPPB scores were less than 10 and who were able to complete a 400MW at baseline (n=424). A structured exercise program versus health education. 400MWT, 4MGS, SPPB. Relationships between self-report and performance measures were consistent between treatment arms. Minimally significant change estimates were 400MWT: 20-30 seconds, 4MGS: 0.03-0.05m/s and SPPB: 0.3 - 0.8 points. Substantial changes were 400MWT: 50-60 seconds, 4MGS: 0.08m/s, SPPB: 0.4 - 1.5 points. Magnitudes of change for improvement and decline were not significantly different. The magnitude of clinically important change in physical performance measures is reasonably consistent using several analytic techniques and appears to be achievable in clinical trials of exercise. Due to limited power, the effect of direction of change on estimates of magnitude remains uncertain.

Zebrafish cdc6 hypomorphic mutation causes Meier-Gorlin syndrome-like phenotype

PubMed Central

Yao, Likun; Chen, Jing; Wu, Xiaotong; Jia, Shunji; Meng, Anming

2017-01-01

Abstract Cell Division Cycle 6 (Cdc6) is a component of pre-replicative complex (preRC) forming on DNA replication origins in eukaryotes. Recessive mutations in ORC1, ORC4, ORC6, CDT1 or CDC6 of the preRC in human cause Meier-Gorlin syndrome (MGS) that is characterized by impaired post-natal growth, short stature and microcephaly. However, vertebrate models of MGS have not been reported. Through N-ethyl-N-nitrosourea mutagenesis and Cas9 knockout, we generate several cdc6 mutant lines in zebrafish. Loss-of-function mutations of cdc6, as manifested by cdc6tsu4305 and cdc6tsu7cd mutants, lead to embryonic lethality due to cell cycle arrest at the S phase and extensive apoptosis. Embryos homozygous for a cdc6 hypomorphic mutation, cdc6tsu21cd, develop normally during embryogenesis. Later on, compared with their wild-type (WT) siblings, cdc6tsu21cd mutant fish show growth retardation, and their body weight and length in adulthood are greatly reduced, which resemble human MGS. Surprisingly, cdc6tsu21cd mutant fish become males with a short life and fail to mate with WT females, suggesting defective reproduction. Overexpression of Cdc6 mutant forms, which mimic human CDC6(T323R) mutation found in a MGS patient, in zebrafish cdc6tsu4305 mutant embryos partially represses cell death phenotype, suggesting that the human CDC6(T323R) mutation is a hypomorph. cdc6tsu21cd mutant fish will be useful to detect more tissue defects and develop medical treatment strategies for MGS patients. PMID:28985365

Direct in situ observation of metallic glass deformation by real-time nano-scale indentation

NASA Astrophysics Data System (ADS)

Gu, Lin; Xu, Limei; Zhang, Qingsheng; Pan, Deng; Chen, Na; Louzguine-Luzgin, Dmitri V.; Yao, Ke-Fu; Wang, Weihua; Ikuhara, Yuichi

2015-03-01

A common understanding of plastic deformation of metallic glasses (MGs) at room temperature is that such deformation occurs via the formation of runaway shear bands that usually lead to catastrophic failure of MGs. Here we demonstrate that inhomogeneous plastic flow at nanoscale can evolve in a well-controlled manner without further developing of shear bands. It is suggested that the sample undergoes an elasto-plastic transition in terms of quasi steady-state localized shearing. During this transition, embryonic shear localization (ESL) propagates with a very slow velocity of order of ~1 nm/s without the formation of a hot matured shear band. This finding further advances our understanding of the microscopic deformation process associated with the elasto-plastic transition and may shed light on the theoretical development of shear deformation in MGs.

Atmospheric Results from the MGS Horizon Science Experiment

NASA Technical Reports Server (NTRS)

Martin, T. Z.; Murphy, J. R.; Hollingsworth, J. L.

1999-01-01

The Horizon Science Experiment (HORSE) utilizes the Mars Horizon Sensor Assembly (MHSA) on the Mars Global Surveyor (MGS) orbiter to measure 15-micron band thermal emission from the Martian atmosphere. During the first two phases of aerobraking, from September 1997 to May 1998, and from September 1998 to March 1999, one of the four MGS quadrants was pointed well onto the planet consistently during the near-periapsis aerobraking passes, allowing the device to obtain data on the latitudinal variation of middle atmospheric temperature (0.2 - 2.0 mbar). Of particular interest during the first phase (L(sub s) = 182 - 300 deg) were the effects of a prominent dust storm at L(sub s) =224 deg, and wavelike behavior in the strong temperature gradient near the north polar cap. Additional information is contained in the original extended abstract.

Electron-beam lithography data preparation based on multithreading MGS/PROXECCO

NASA Astrophysics Data System (ADS)

Eichhorn, Hans; Lemke, Melchior; Gramss, Juergen; Buerger, B.; Baetz, Uwe; Belic, Nikola; Eisenmann, Hans

2001-04-01

This paper will highlight an enhanced MGS layout data post processor and the results of its industrial application. Besides the preparation of hierarchical GDS layout data, the processing of flat data has been drastically accelerated. The application of the Proximity Correction in conjunction with the OEM version of the PROXECCO was crowned with success for data preparation of mask sets featuring 0.25 micrometers /0.18 micrometers integration levels.

The pathogenic persona of community associated oral streptococci

PubMed Central

Whitmore, Sarah E.; Lamont, Richard J.

2011-01-01

Summary The mitis group streptococci (MGS) are widespread in the oral cavity and are traditionally associated with oral health. However, these organisms have many attributes that contribute to the development of pathogenic oral communities. MGS adhere rapidly to saliva-coated tooth surfaces, thereby providing an attachment substratum for more overtly pathogenic organisms such as Porphyromonas gingivalis, and the two species assemble into heterotypic communities. Close physical association facilitates physiologic support, and pathogens such as Actinobacillus actinomycetemcomitans display resource partitioning to favour carbon sources generated by streptococcal metabolism. MGS exchange information with community members through a number of interspecies signaling systems including AI-2 and contact dependent mechanisms. Signal transduction systems induced in P. gingivalis are based on protein dephosphorylation mediated by the tyrosine phosphatase Ltp1, and converge on a LuxR-family transcriptional regulator, CdhR. Phenotypic responses in P. gingivalis include regulation of hemin uptake systems and gingipain activity, processes that are intimately linked to the virulence of the organism. Furthermore, communities of S. gordonii with P. gingivalis or with A. actinomycetemcomitans are more pathogenic in animal models than the constituent species alone. We propose that MGS should be considered accessory pathogens, organisms whose pathogenic potential only becomes evident in the context of a heterotypic microbial community. PMID:21635580

The pathogenic persona of community-associated oral streptococci.

PubMed

Whitmore, Sarah E; Lamont, Richard J

2011-07-01

The mitis group streptococci (MGS) are widespread in the oral cavity and are traditionally associated with oral health. However, these organisms have many attributes that contribute to the development of pathogenic oral communities. MGS adhere rapidly to saliva-coated tooth surfaces, thereby providing an attachment substratum for more overtly pathogenic organisms such as Porphyromonas gingivalis, and the two species assemble into heterotypic communities. Close physical association facilitates physiologic support, and pathogens such as Aggregatibacter actinomycetemcomitans display resource partitioning to favour carbon sources generated by streptococcal metabolism. MGS exchange information with community members through a number of interspecies signalling systems including AI-2 and contact dependent mechanisms. Signal transduction systems induced in P. gingivalis are based on protein dephosphorylation mediated by the tyrosine phosphatase Ltp1, and converge on a LuxR-family transcriptional regulator, CdhR. Phenotypic responses in P. gingivalis include regulation of hemin uptake systems and gingipain activity, processes that are intimately linked to the virulence of the organism. Furthermore, communities of S. gordonii with P. gingivalis or with A. actinomycetemcomitans are more pathogenic in animal models than the constituent species alone. We propose that MGS should be considered accessory pathogens, organisms whose pathogenic potential only becomes evident in the context of a heterotypic microbial community. © 2011 Blackwell Publishing Ltd.

Surface Properties of Squalene/Meibum Films and NMR Confirmation of Squalene in Tears

PubMed Central

Ivanova, Slavyana; Tonchev, Vesselin; Yokoi, Norihiko; Yappert, Marta C.; Borchman, Douglas; Georgiev, Georgi As.

2015-01-01

Squalene (SQ) possesses a wide range of pharmacological activities (antioxidant, drug carrier, detoxifier, hydrating, emollient) that can be of benefit to the ocular surface. It can come in contact with human meibum (hMGS; the most abundant component of the tear film lipid layer) as an endogenous tear lipid or from exogenous sources as eyelid sebum or pharmaceuticals. The aims of this study were to determine (i) if SQ is in tear lipids and (ii) its influence on the surface properties of hMGS films. Heteronuclear single quantum correlation NMR confirmed 7 mol % SQ in Schirmer’s strips extracts. The properties of SQ/hMGS pseudo-binary films at the air/water interface were studied with Langmuir surface balance, stress-relaxation dilatational rheology and Brewster angle microscopy. SQ does not possess surfactant properties. When mixed with hMGS squalene (i) localized over the layers’ thinner regions and (ii) did not affect the film pressure at high compression. Therefore, tear SQ is unlikely to instigate dry eye, and SQ can be used as a safe and “inert” ingredient in formulations to protect against dry eye. The layering of SQ over the thinner film regions in addition to its pharmacological properties could contribute to the protection of the ocular surface. PMID:26370992

Complexity: an internet resource for analysis of DNA sequence complexity

PubMed Central

Orlov, Y. L.; Potapov, V. N.

2004-01-01

The search for DNA regions with low complexity is one of the pivotal tasks of modern structural analysis of complete genomes. The low complexity may be preconditioned by strong inequality in nucleotide content (biased composition), by tandem or dispersed repeats or by palindrome-hairpin structures, as well as by a combination of all these factors. Several numerical measures of textual complexity, including combinatorial and linguistic ones, together with complexity estimation using a modified Lempel–Ziv algorithm, have been implemented in a software tool called ‘Complexity’ (http://wwwmgs.bionet.nsc.ru/mgs/programs/low_complexity/). The software enables a user to search for low-complexity regions in long sequences, e.g. complete bacterial genomes or eukaryotic chromosomes. In addition, it estimates the complexity of groups of aligned sequences. PMID:15215465

A High Efficiency System for Science Instrument Commanding for the Mars Global Surveyor Mission

NASA Technical Reports Server (NTRS)

Jr., R. N. Brooks

1995-01-01

The Mars Global Surveyor (MGS) mission will return to Mars to re- cover most of the science lost when the ill fated Mars Observer space- craft suffered a catastrophic anomaly in its propulsion system and did not go into orbit. Described in detail are the methods employed by the MGS Sequence Team to accelerate science command processing by using standard command generation process and standard UNIX control scripts.

Large, Bright Wind Ripples

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-397, 20 June 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows large, relatively bright ripples of windblown sediment in the Sinus Sabaeus region south of Schiaparelli Basin. The surrounding substrate is thickly mantled by very dark material, possibly windblown silt that settled out of the atmosphere. The picture is located near 7.1oS, 343.7oW. Sunlight illuminates the scene from the left.

Inherent structure length in metallic glasses: Simplicity behind complexity

DOE PAGES

Wu, Yuan; Wang, Hui; Cheng, Yongqiang; ...

2015-08-06

One of the central themes in materials science is the structure-property relationship. In conventional crystalline metals, their mechanical behaviour is often dictated by well-defined structural defects such as dislocations, impurities, and twins. However, the structure-property relationship in amorphous alloys is far from being understood, due to great difficulties in characterizing and describing the disordered atomic-level structure. Here, we report a universal, yet simple, correlation between the macroscopic mechanical properties (i.e., yield strength and shear modulus) and a unique characteristic structural length in metallic glasses (MGs). Lastly, our analysis indicates that this characteristic length can incorporate effects of both the inter-atomicmore » distance and valence electron density in MGs, and result in the observed universal correlation. The current findings shed lights on the basic understanding of mechanical properties of MGs from their disordered atomic structures.« less

Frozen Carbon Dioxide

NASA Technical Reports Server (NTRS)

2005-01-01

1 August 2005 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a south polar residual cap landscape, formed in frozen carbon dioxide. There is no place on Earth that one can go to visit a landscape covering thousands of square kilometers with frozen carbon dioxide, so mesas, pits, and other landforms of the martian south polar region are as alien as they are beautiful. The scarps of the south polar region are known from thousands of other MGS MOC images to retreat at a rate of about 3 meters (3 yards) per martian year, indiating that slowly, over the course of the MGS mission, the amount of carbon dioxide in the martian atmosphere has probably been increasing.

Location near: 86.9oS, 25.5oW Image width: width: 3 km (1.9 mi) Illumination from: upper left Season: Southern Spring

Serum and kidney metabolic changes of rat nephrotoxicity induced by Morning Glory Seed.

PubMed

Ma, Chao; Bi, Kaishun; Su, Dan; Ji, Wei; Zhang, Ming; Fan, Xinxin; Wang, Chao; Chen, Xiaohui

2010-10-01

Previous nephrotoxicology study on Morning Glory Seed (MGS) mainly focused on whole animal level, using creatinine and BUN as biochemical indicators to evaluate renal function. This work was designed to delineate the comprehensive metabolic syndromes of MGS-induced nephrotoxicity. An ultra liquid chromatography coupled with mass spectrometry (UPLC/MS) metabonomic approach was employed to characterize the metabolic profile of plasma and kidney tissue extract from rats treated with MGS at a single nephrotoxic dose of 15 g/kg/day for 14 consecutive days. Acquired data were subjected to principal component analysis (PCA) for differentiating the model and the control groups. The results indicated that certain metabolic pathways, such as lysophosphatidylcholines formation and sphingolipids cycle were accelerated, while the phenylalanine level in serum was decreased. We believe that metabonomic approach is helpful to further understanding and clinical diagnosis of traditional Chinese medicine (TCM) induced nephrotoxicity. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Dose calculation accuracy of the Monte Carlo algorithm for CyberKnife compared with other commercially available dose calculation algorithms.

PubMed

Sharma, Subhash; Ott, Joseph; Williams, Jamone; Dickow, Danny

2011-01-01

Monte Carlo dose calculation algorithms have the potential for greater accuracy than traditional model-based algorithms. This enhanced accuracy is particularly evident in regions of lateral scatter disequilibrium, which can develop during treatments incorporating small field sizes and low-density tissue. A heterogeneous slab phantom was used to evaluate the accuracy of several commercially available dose calculation algorithms, including Monte Carlo dose calculation for CyberKnife, Analytical Anisotropic Algorithm and Pencil Beam convolution for the Eclipse planning system, and convolution-superposition for the Xio planning system. The phantom accommodated slabs of varying density; comparisons between planned and measured dose distributions were accomplished with radiochromic film. The Monte Carlo algorithm provided the most accurate comparison between planned and measured dose distributions. In each phantom irradiation, the Monte Carlo predictions resulted in gamma analysis comparisons >97%, using acceptance criteria of 3% dose and 3-mm distance to agreement. In general, the gamma analysis comparisons for the other algorithms were <95%. The Monte Carlo dose calculation algorithm for CyberKnife provides more accurate dose distribution calculations in regions of lateral electron disequilibrium than commercially available model-based algorithms. This is primarily because of the ability of Monte Carlo algorithms to implicitly account for tissue heterogeneities, density scaling functions; and/or effective depth correction factors are not required. Copyright © 2011 American Association of Medical Dosimetrists. Published by Elsevier Inc. All rights reserved.

Rapid automated superposition of shapes and macromolecular models using spherical harmonics.

PubMed

Konarev, Petr V; Petoukhov, Maxim V; Svergun, Dmitri I

2016-06-01

A rapid algorithm to superimpose macromolecular models in Fourier space is proposed and implemented ( SUPALM ). The method uses a normalized integrated cross-term of the scattering amplitudes as a proximity measure between two three-dimensional objects. The reciprocal-space algorithm allows for direct matching of heterogeneous objects including high- and low-resolution models represented by atomic coordinates, beads or dummy residue chains as well as electron microscopy density maps and inhomogeneous multi-phase models ( e.g. of protein-nucleic acid complexes). Using spherical harmonics for the computation of the amplitudes, the method is up to an order of magnitude faster than the real-space algorithm implemented in SUPCOMB by Kozin & Svergun [ J. Appl. Cryst. (2001 ▸), 34 , 33-41]. The utility of the new method is demonstrated in a number of test cases and compared with the results of SUPCOMB . The spherical harmonics algorithm is best suited for low-resolution shape models, e.g . those provided by solution scattering experiments, but also facilitates a rapid cross-validation against structural models obtained by other methods.

Improved genetic algorithm for the protein folding problem by use of a Cartesian combination operator.

PubMed Central

Rabow, A. A.; Scheraga, H. A.

1996-01-01

We have devised a Cartesian combination operator and coding scheme for improving the performance of genetic algorithms applied to the protein folding problem. The genetic coding consists of the C alpha Cartesian coordinates of the protein chain. The recombination of the genes of the parents is accomplished by: (1) a rigid superposition of one parent chain on the other, to make the relation of Cartesian coordinates meaningful, then, (2) the chains of the children are formed through a linear combination of the coordinates of their parents. The children produced with this Cartesian combination operator scheme have similar topology and retain the long-range contacts of their parents. The new scheme is significantly more efficient than the standard genetic algorithm methods for locating low-energy conformations of proteins. The considerable superiority of genetic algorithms over Monte Carlo optimization methods is also demonstrated. We have also devised a new dynamic programming lattice fitting procedure for use with the Cartesian combination operator method. The procedure finds excellent fits of real-space chains to the lattice while satisfying bond-length, bond-angle, and overlap constraints. PMID:8880904

The sustained effect (12 months) of a single-dose vectored thermal pulsation procedure for meibomian gland dysfunction and evaporative dry eye

PubMed Central

Blackie, Caroline A; Coleman, Christy A; Holland, Edward J

2016-01-01

Purpose To evaluate the sustained effect (up to 1 year) of a single, 12-minute vectored thermal pulsation (VTP) treatment in improving meibomian gland function and dry eye symptoms in patients with meibomian gland dysfunction and evaporative dry eye. Methods The prospective, multicenter, open-label clinical trial included 200 subjects (400 eyes) who were randomized to a single VTP treatment (treatment group) or twice-daily, 3-month, conventional warm compress and eyelid hygiene therapy (control group). Control group subjects received crossover VTP treatment at 3 months (crossover group). Effectiveness measures of meibomian gland secretion (MGS) and dry eye symptoms were evaluated at baseline and 1, 3, 6, 9, and 12 months. Subjects with inadequate symptom relief could receive additional meibomian gland dysfunction therapy after 3 (treatment group) and 6 months (crossover group). Results At 3 months, the treatment group had greater mean improvement in MGS (P<0.0001) and dry eye symptoms (P=0.0068), compared to controls. At 12 months, 86% of the treatment group had received only one VTP treatment, and sustained a mean improvement in MGS from 6.4±3.7 (baseline) to 17.3±9.1 (P<0.0001) and dry eye symptoms from 44.1±20.4 to 21.6±21.3 (P<0.0001); 89% of the crossover group had received only one VTP treatment with sustained mean improvement in MGS from 6.3±3.6 to 18.4±11.1 (P<0.0001) and dry eye symptoms from 49.1±21.0 to 24.0±23.2 (P<0.0001). Greater mean improvement in MGS was associated with less severe baseline MGS (P=0.0017) and shorter duration of time between diagnosis and treatment (P=0.0378). Conclusion A single VTP treatment can deliver a sustained mean improvement in meibomian gland function and mean reduction in dry eye symptoms, over 12 months. A single VTP treatment provides significantly greater mean improvement in meibomian gland function and dry eye symptoms as compared to a conventional, twice-daily, 3-month regimen. Early VTP intervention for meibomian gland dysfunction is associated with improved treatment outcomes. PMID:27555745

Rail height effects on safety performance of Midwest Guardrail System.

PubMed

Asadollahi Pajouh, Mojdeh; Julin, Ramen D; Stolle, Cody S; Reid, John D; Faller, Ronald K

2018-02-17

Guardrail heights play a crucial role in the way that errant vehicles interact with roadside barriers. Low rail heights increase the propensity of vehicle rollover and override, whereas excessively tall rails promote underride. Further, rail mounting heights and post embedment depths may be altered by variations in roadside terrain. An increased guardrail height may be desirable to accommodate construction tolerances, soil erosion, frost heave, and future roadway overlays. This study aimed to investigate and identify a maximum safe installation height for the Midwest Guardrail System that would be robust and remain crashworthy before and after pavement overlays. A research investigation was performed to evaluate the safety performance of increased mounting heights for the standard 787-mm (31-in.)-tall Midwest Guardrail System (MGS) through crash testing and computer simulation. Two full-scale crash tests with small passenger cars were performed on the MGS with top-rail mounting heights of 864 and 914 mm (34 and 36 in.). Test results were then used to calibrate computer simulation models. In the first test, a small car impacted the MGS with 864-mm (34-in.) rail height at 102 km/h (63.6 mph) and 25.0° and was successfully redirected. In the second test, another small car impacted the MGS with a 914-mm (36-in.) rail height at 103 km/h (64.1 mph) and 25.6° and was successful. Both system heights satisfied the Manual for Assessing Safety Hardware (MASH) Test Level 3 (TL-3) evaluation criteria. Test results were then used to calibrate computer simulation models. A mounting height of 36 in. was determined to be the maximum guardrail height that would safely contain and redirect small car vehicles. Simulations confirmed that taller guardrail heights (i.e., 37 in.) would likely result in small car underride. In addition, simulation results indicated that passenger vehicle models were successfully contained by the 34- and 36-in.-tall MGS installed on approach slopes as steep as 6:1. A mounting height of 914 mm (36 in.) was determined to be the maximum guardrail height that would safely contain and redirect 1100C vehicles and not allow underride or excessive vehicle snag on support posts. Recommendations were also provided regarding the safety performance of the MGS with increased height.

A method to estimate the neutral atmospheric density near the ionospheric main peak of Mars

NASA Astrophysics Data System (ADS)

Zou, Hong; Ye, Yu Guang; Wang, Jin Song; Nielsen, Erling; Cui, Jun; Wang, Xiao Dong

2016-04-01

A method to estimate the neutral atmospheric density near the ionospheric main peak of Mars is introduced in this study. The neutral densities at 130 km can be derived from the ionospheric and atmospheric measurements of the Radio Science experiment on board Mars Global Surveyor (MGS). The derived neutral densities cover a large longitude range in northern high latitudes from summer to late autumn during 3 Martian years, which fills the gap of the previous observations for the upper atmosphere of Mars. The simulations of the Laboratoire de Météorologie Dynamique Mars global circulation model can be corrected with a simple linear equation to fit the neutral densities derived from the first MGS/RS (Radio Science) data sets (EDS1). The corrected simulations with the same correction parameters as for EDS1 match the derived neutral densities from two other MGS/RS data sets (EDS2 and EDS3) very well. The derived neutral density from EDS3 shows a dust storm effect, which is in accord with the Mars Express (MEX) Spectroscopy for Investigation of Characteristics of the Atmosphere of Mars measurement. The neutral density derived from the MGS/RS measurements can be used to validate the Martian atmospheric models. The method presented in this study can be applied to other radio occultation measurements, such as the result of the Radio Science experiment on board MEX.

The effect of handling method on the mouse grimace scale in two strains of laboratory mice

PubMed Central

Leach, Matthew C

2015-01-01

Pain assessment in laboratory animals is an ethical and legal requirement. The mouse grimace scale (MGS) is a new method of pain assessment deemed to be both accurate and reliable, and observers can be rapidly trained to use it. In order for a new pain assessment technique to be effective, we must ensure that the score awarded by the technique is only influenced by pain and not by other husbandry or non-painful but integral aspects of research protocols. Here, we studied 16 male mice, housed under standard laboratory conditions. Eight mice were randomly assigned to tail handling and eight to tube handling on arrival at the unit. On each occasion the mice were removed from their cage for routine husbandry, they were picked up using their assigned handling method. Photographs of the mouse faces were then scored by treatment-blind observers as per the MGS manual (see Nature Methods 2010, Vol. 7, pp 447–449), and scores from the two groups were compared. There was no significant difference in MGS scores between the mice that had been handled using a tube compared with the tail. Consequently, these methods of handling did not influence the baseline grimace score given, suggesting that these handling techniques are not confounding factors when establishing baseline MGS scores, further validating this technique. PMID:26657061

Activity and safety of bevacizumab plus fotemustine for recurrent malignant gliomas.

PubMed

Vaccaro, V; Fabi, A; Vidiri, A; Giannarelli, D; Metro, G; Telera, S; Vari, S; Piludu, F; Carosi, M A; Villani, V; Cognetti, F; Pompili, A; Marucci, L; Carapella, C M; Pace, A

2014-01-01

No established chemotherapeutic regimen exists for the treatment of recurrent malignant gliomas (rMGs). Herein, we report the activity and safety results of the bevacizumab (B) plus fotemustine (FTM) combination for the treatment of rMGs. An induction phase consisted of B 10 mg/kg days 1, 15 plus FTM 65 mg/m(2) days 1, 8, and 15. Nonprogressive patients entered the maintenance phase with B 10 mg/kg plus FTM 75 mg/m(2) every 3 weeks. The primary endpoint was response rate; secondary endpoints included safety, progression free survival (PFS), and overall survival (OS). Twenty-six patients affected by recurrent MGs (50% glioblastoma) were enrolled. Eight partial responses (31%) were observed. Median PFS and OS were 4 (95% C.I.: 2.8-5.1) and 6 months (95% C.I.: 4.2-7.8), respectively. Responses were significantly associated with both improved PFS and OS (P = 0.002 and P = 0.001, resp.). Treatment adverse events were mostly mild to moderate in intensity. Bevacizumab-related adverse events included grade 3 venous thromboembolic event (8%), grade 2 epistaxis (4%), hypertension (8%), and gastrointestinal perforation (4%). Bevacizumab plus FTM showed activity and good tolerability in pretreated MGs. Further investigations are needed in order to verify the benefits deriving from the addition of B to a cytotoxic in this clinical setting of patients.

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes.

PubMed

Tchigvintsev, Anatoli; Tran, Hai; Popovic, Ana; Kovacic, Filip; Brown, Greg; Flick, Robert; Hajighasemi, Mahbod; Egorova, Olga; Somody, Joseph C; Tchigvintsev, Dmitri; Khusnutdinova, Anna; Chernikova, Tatyana N; Golyshina, Olga V; Yakimov, Michail M; Savchenko, Alexei; Golyshin, Peter N; Jaeger, Karl-Erich; Yakunin, Alexander F

2015-03-01

Most of the Earth's biosphere is cold and is populated by cold-adapted microorganisms. To explore the natural enzyme diversity of these environments and identify new carboxylesterases, we have screened three marine metagenome gene libraries for esterase activity. The screens identified 23 unique active clones, from which five highly active esterases were selected for biochemical characterization. The purified metagenomic esterases exhibited high activity against α-naphthyl and p-nitrophenyl esters with different chain lengths. All five esterases retained high activity at 5 °C indicating that they are cold-adapted enzymes. The activity of MGS0010 increased more than two times in the presence of up to 3.5 M NaCl or KCl, whereas the other four metagenomic esterases were inhibited to various degrees by these salts. The purified enzymes showed different sensitivities to inhibition by solvents and detergents, and the activities of MGS0010, MGS0105 and MGS0109 were stimulated three to five times by the addition of glycerol. Screening of purified esterases against 89 monoester substrates revealed broad substrate profiles with a preference for different esters. The metagenomic esterases also hydrolyzed several polyester substrates including polylactic acid suggesting that they can be used for polyester depolymerization. Thus, esterases from marine metagenomes are cold-adapted enzymes exhibiting broad biochemical diversity reflecting the environmental conditions where they evolved.

Study of the Radial Peripapillary Capillary Network in Congenital Optic Disc Anomalies With Optical Coherence Tomography Angiography.

PubMed

Cennamo, Gilda; Rossi, Claudia; Ruggiero, Pasquale; de Crecchio, Giuseppe; Cennamo, Giovanni

2017-04-01

To evaluate the radial peripapillary capillary network with optical coherence tomography angiography (angio-OCT) in morning glory syndrome (MGS), optic disc colobomas, and optic disc pits, and to explore possible correlations between the neural vascular structure and the pathogenesis of congenital optic disc anomalies. Prospective observational comparative case series. Fifteen eyes of 15 patients with congenital optic disc anomalies were enrolled in this study. All patients underwent angio-OCT. The scans were centered on optic discs. The mean age at presentation was 33 years (range: 19-50 years). Congenital optic disc anomalies were identified in all 15 eyes. Three eyes had the characteristic funduscopic signs of MGS, and angio-OCT scans of the peripapillary retina revealed a dense microvascular network. Optic disc colobomas were found in 5 eyes, and the characteristic funduscopic signs of optic pits were found in 7 eyes. Angio-OCT showed the absence of a radial peripapillary microvascular network in these 12 eyes. The finding that angio-OCT scans confirmed the presence of a peripapillary microvascular network only in MGS cases supports the hypothesis that a primary neuroectodermal abnormality and a secondary mesenchymal abnormality leads to MGS. Angio-OCT is a safe, rapid imaging technique that could shed light on the pathogenesis of rare diseases of the optic disc. Copyright © 2016 Elsevier Inc. All rights reserved.

Comparative proteomic analysis provides insight into 10-hydroxy-2-decenoic acid biosynthesis in honey bee workers.

PubMed

Yang, Xiao-Hui; Yang, Shi-Fa; Wang, Rui-Ming

2017-07-01

10-Hydroxy-2-decenoic acid (10-HDA) is the major compound produced from the mandibular glands (MGs) of honey bee workers. However, little information is available on the molecular mechanisms of 10-HDA biosynthesis. In our study, based on investigating the 10-HDA secretion pattern and the morphological characteristics of MGs from honey bee workers of different ages, a comparative proteomic analysis was performed in the MGs of workers with different 10-HDA production. In total, 59 up-regulated protein species representing 45 unique proteins were identified in high 10-HDA-producing workers by 2-DE-MALDI-TOF/TOF MS. These proteins were involved in carbohydrate/energy metabolism, fatty acid metabolism, protein metabolism and folding, antioxidation, cytoskeleton, development and cell signaling. Proteins related to fatty acid metabolism, including fatty acid synthase and β-oxidation enzymes, are potentially crucial proteins involved in 10-HDA biosynthesis pathway. And RNA interference (RNAi) results demonstrated that knockdown of electron transfer flavoprotein subunit beta (ETF-β), one of the protein related to fatty acid metabolism, decreased 10-HDA production of worker bees, suggesting that ETF-β was necessary for 10-HDA biosynthesis. This study reveals the characteristics of MGs of worker bees at different developmental stages and proteins associated with 10-HDA biosynthesis, which provides the first insight into the molecular mechanism of 10-HDA biosynthesis.

The effect of handling method on the mouse grimace scale in two strains of laboratory mice.

PubMed

Miller, Amy L; Leach, Matthew C

2016-08-01

Pain assessment in laboratory animals is an ethical and legal requirement. The mouse grimace scale (MGS) is a new method of pain assessment deemed to be both accurate and reliable, and observers can be rapidly trained to use it. In order for a new pain assessment technique to be effective, we must ensure that the score awarded by the technique is only influenced by pain and not by other husbandry or non-painful but integral aspects of research protocols. Here, we studied 16 male mice, housed under standard laboratory conditions. Eight mice were randomly assigned to tail handling and eight to tube handling on arrival at the unit. On each occasion the mice were removed from their cage for routine husbandry, they were picked up using their assigned handling method. Photographs of the mouse faces were then scored by treatment-blind observers as per the MGS manual (see Nature Methods 2010, Vol. 7, pp 447-449), and scores from the two groups were compared. There was no significant difference in MGS scores between the mice that had been handled using a tube compared with the tail. Consequently, these methods of handling did not influence the baseline grimace score given, suggesting that these handling techniques are not confounding factors when establishing baseline MGS scores, further validating this technique. © The Author(s) 2015.

Operational Data Reduction Procedure for Determining Density and Vertical Structure of the Martian Upper Atmosphere from Mars Global Surveyor Accelerometer Measurements

NASA Technical Reports Server (NTRS)

Cancro, George J.; Tolson, Robert H.; Keating, Gerald M.

1998-01-01

The success of aerobraking by the Mars Global Surveyor (MGS) spacecraft was partly due to the analysis of MGS accelerometer data. Accelerometer data was used to determine the effect of the atmosphere on each orbit, to characterize the nature of the atmosphere, and to predict the atmosphere for future orbits. To interpret the accelerometer data, a data reduction procedure was developed to produce density estimations utilizing inputs from the spacecraft, the Navigation Team, and pre-mission aerothermodynamic studies. This data reduction procedure was based on the calculation of aerodynamic forces from the accelerometer data by considering acceleration due to gravity gradient, solar pressure, angular motion of the MGS, instrument bias, thruster activity, and a vibration component due to the motion of the damaged solar array. Methods were developed to calculate all of the acceleration components including a 4 degree of freedom dynamics model used to gain a greater understanding of the damaged solar array. The total error inherent to the data reduction procedure was calculated as a function of altitude and density considering contributions from ephemeris errors, errors in force coefficient, and instrument errors due to bias and digitization. Comparing the results from this procedure to the data of other MGS Teams has demonstrated that this procedure can quickly and accurately describe the density and vertical structure of the Martian upper atmosphere.

pyRMSD: a Python package for efficient pairwise RMSD matrix calculation and handling.

PubMed

Gil, Víctor A; Guallar, Víctor

2013-09-15

We introduce pyRMSD, an open source standalone Python package that aims at offering an integrative and efficient way of performing Root Mean Square Deviation (RMSD)-related calculations of large sets of structures. It is specially tuned to do fast collective RMSD calculations, as pairwise RMSD matrices, implementing up to three well-known superposition algorithms. pyRMSD provides its own symmetric distance matrix class that, besides the fact that it can be used as a regular matrix, helps to save memory and increases memory access speed. This last feature can dramatically improve the overall performance of any Python algorithm using it. In addition, its extensibility, testing suites and documentation make it a good choice to those in need of a workbench for developing or testing new algorithms. The source code (under MIT license), installer, test suites and benchmarks can be found at https://pele.bsc.es/ under the tools section. victor.guallar@bsc.es Supplementary data are available at Bioinformatics online.

Directed Field Ionization: A Genetic Algorithm for Evolving Electric Field Pulses

NASA Astrophysics Data System (ADS)

Kang, Xinyue; Rowley, Zoe A.; Carroll, Thomas J.; Noel, Michael W.

2017-04-01

When an ionizing electric field pulse is applied to a Rydberg atom, the electron's amplitude traverses many avoided crossings among the Stark levels as the field increases. The resulting superposition determines the shape of the time resolved field ionization spectrum at a detector. An engineered electric field pulse that sweeps back and forth through avoided crossings can control the phase evolution so as to determine the electron's path through the Stark map. In the region of n = 35 in rubidium there are hundreds of potential avoided crossings; this yields a large space of possible pulses. We use a genetic algorithm to search this space and evolve electric field pulses to direct the ionization of the Rydberg electron in rubidium. We present the algorithm along with a comparison of simulated and experimental results. This work was supported by the National Science Foundation under Grants No. 1607335 and No. 1607377 and used the Extreme Science and Engineering Discovery Environment (XSEDE), which is supported by National Science Foundation Grant Number OCI-1053575.

Resource Theory of Superposition

NASA Astrophysics Data System (ADS)

Theurer, T.; Killoran, N.; Egloff, D.; Plenio, M. B.

2017-12-01

The superposition principle lies at the heart of many nonclassical properties of quantum mechanics. Motivated by this, we introduce a rigorous resource theory framework for the quantification of superposition of a finite number of linear independent states. This theory is a generalization of resource theories of coherence. We determine the general structure of operations which do not create superposition, find a fundamental connection to unambiguous state discrimination, and propose several quantitative superposition measures. Using this theory, we show that trace decreasing operations can be completed for free which, when specialized to the theory of coherence, resolves an outstanding open question and is used to address the free probabilistic transformation between pure states. Finally, we prove that linearly independent superposition is a necessary and sufficient condition for the faithful creation of entanglement in discrete settings, establishing a strong structural connection between our theory of superposition and entanglement theory.

Martian Meteorology: Determination of Large Scale Weather Patterns from Surface Measurements

NASA Technical Reports Server (NTRS)

Murphy, James R.; Haberle, Robert M.; Bridger, Alison F. C.

1998-01-01

We employed numerical modelling of the martian atmosphere, and our expertise in understanding martian atmospheric processes, to better understand the coupling between lower and upper atmosphere processes. One practical application of this work has been our involvement with the ongoing atmospheric aerobraking which the Mars Global Surveyor (MGS) spacecraft is currently undergoing at Mars. Dr. Murphy is currently a member of the Mars Global Surveyor (MGS) Aerobraking Atmospheric Advisory Group (AAG). He was asked to participate in this activity based upon his knowledge of martian atmospheric dynamical processes. Aerobraking is a process whereby a spacecraft, in an elliptical orbit, passes through the upper layers of the atmosphere (in this instance Mars). This passage through the atmosphere 'drags'upon the spacecraft, gradually reducing its orbital velocity. This has the effect, over time, of converting the elliptical orbit to a circular orbit, which is the desired mapping orbit for MGS. Carrying out aerobraking eliminates the need for carrying large amounts of fuel on the spacecraft to execute an engine burn to achieve the desired orbit. Eliminating the mass of the fuel reduces the cost of launch. Damage to one of MGS's solar panels shortly after launch has resulted in a less aggressive extended in time aerobraking phase which will not end until March, 1999. Phase I extended from Sept. 1997 through March 1998. During this time period, Dr. Murphy participated almost daily in the AAG meetings, and beginning in December 1997 lead the meeting several times per week. The leader of each of the daily AAG meetings took the results of that meeting (current state of the atmosphere, identification of any time trends or spatial patterns in upper atmosphere densities, etc.) forward to the Aerobraking Planning Group (APG) meeting, at which time the decision was made to not change MGS orbit, to lower the orbit to reach higher densities (greater 'drag'), or raise the orbit to avoid experiencing excessive, possibly damaging densities.

A Randomized Controlled Trial of Omega 3 Fatty Acids in Rosacea Patients with Dry Eye Symptoms.

PubMed

Bhargava, Rahul; Chandra, Mini; Bansal, Utsav; Singh, Divya; Ranjan, Somesh; Sharma, Shalini

2016-10-01

Objective or purpose: To evaluate the efficacy of dietary omega-3 fatty acids (O3FAs) in rosacea patients having dry eye symptoms. A prospective, interventional, randomized, double-masked, placebo-controlled, multi-centric study was done. Symptomatic patients with rosacea were recruited based on their response to (Dry Eye Scoring System, DESS©); a score of 0-3 was assigned to dry eye-related symptoms like ocular fatigue, blurring of vision, itching or burning, sandy or gritty sensation, and redness, respectively (DESS©). Subjects were (n = 130) were randomized to receive either O3FAs (n = 65) or placebo (n = 65) capsules (olive oil) twice daily for 6 months. Patients were evaluated at baseline, 1, 3, and 6 months. Change in subjective dry eye symptoms was the primary outcome measure. Change in meibomian gland score (MGS), Schirmer score, and tear film breakup time (TBUT) were the secondary outcome measures. Repeated-measures ANOVA revealed that there was a significant (p < 0.001) change in symptoms (F(1.506, 88.825 = 315.193), MGS (F(1.336, 78.796 = 84.438), Schirmer score (F(1.322, 78.022 = 86.559), and TBUT (F(1.354, 79.898 = 179.020.559) in O3FA group as compared to placebo group. Post-hoc test revealed that there was a significant change in dry eye symptoms at all points of time; there was a significant change in MGS, Schirmer score, and TBUT also, but only after 3 months of intervention. Linear regression established that symptom severity could significantly predict MGS, Schirmer score, and TBUT. There was a significant change in the slope (intercept) of the regression plots in O3FA group as compared to the placebo group. Rosacea patients with dry eye symptoms have significant improvement in symptoms, MGS, TBUT, and Schirmer score, following dietary intervention with O3FAs for 6 months.

An Aerobraking Strategy for Determining Mars Upper Atmospheric Structure

NASA Astrophysics Data System (ADS)

Bougher, S. W.; Murphy, J. R.; Haberle, R. M.

1997-07-01

The Mars Global Surveyor (MGS) spacecraft will enter Mars orbit on Sept. 12, 1997, and thereafter undergo aerobraking for roughly 4-months. The final data-taking orbit to be achieved is sun-synchronous (2PM/2AM). An aerobraking strategy has been developed that not only will provide the walk-in capability needed to safely achieve the required Mars orbit, but also will provide a careful monitoring of the atmospheric structure. In particular, the linkage between the lower (0-100 km) and upper (100- 150 km) Mars atmospheres will be investigated. A suite of complementary measurements is planned that will probe the atmosphere over 0-150 km, including : (1) MGS Accelerometer density and inferred temperatures (100-150 km), (2) MGS Thermal Emission Spectrometer (TES) nadir (25-30 km) and limb (up to about 55 km) temperatures, (3) MGS Electron Reflectometer (ER) F1-peak heights (near 130 km), (4) ground-based microwave disk-averaged temperatures (0-70 km), and (5) Mars Pathfinder (MPF) surface meteorological data at 20 N latitude. These datasets acquired during the aerobraking phase will enable the current state of the atmosphere to be examined. Potential dust storm activity and its manifestations throughout the atmosphere can be monitored over Ls = 184 to 250. A corresponding library of coupled 3-D model simulations, based upon the NASA Ames Mars GCM and the NCAR Mars Thermospheric GCM (MTGCM), will be used to : (1) validate the current state of the Mars atmosphere, (2) investigate the various orbital, seasonal, LAT-LT-LON, and potential dust storm trends, and (3) predict the structure of the Mars atmosphere in the aerobraking corridor that is approaching in future MGS orbits. The in-situ accelerometer and ER data will eventually be used to construct a Mars empirical model covering 100-150 km. We will present a few selected GCM simulations to illustrate the expected atmospheric response to a dust storm event. In addition, we will discuss why these upper atmosphere datasets are important to future Mars missions.

Solar Conjunction Ends: Nirgal Vallis

NASA Technical Reports Server (NTRS)

2004-01-01

28 September 2004 For the past several weeks, Mars was on the other side of the Sun relative to Earth. During this period, known as solar conjunction, radio communication with spacecraft orbiting and roving on Mars was limited. As is always done during solar conjunction, on 7 September 2004, the Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) was turned off. On Saturday, 25 September 2004, the MOC team gathered at Malin Space Science Systems to command the instrument to turn back on again. After a successful turn-on, MOC acquired its first narrow angle camera image, shown here, on orbit 24808 (24,808th orbit since the start of the Mapping phase of the MGS mission in March 1999).

The 25 September image shows a portion of Nirgal Vallis, an ancient valley system in the Mare Erythraeum region of Mars. The valley floor is covered by large, ripple-like bedforms created by wind. This early southern winter image is located near 27.4oS, 42.9oW, and covers an area approximately 3 km (1.9 mi) across. Sunlight illuminates the scene from the upper left.

This was the 4th solar conjunction period that MGS and MOC have been through since the spacecraft reached the red planet in September 1997. The four solar conjunction periods, where MOC was turned off, were:

First solar conjunction: 29 April - 1 June 1998 Second solar conjunction: 22 June - 12 July 2000 Third solar conjunction: 1 August - 18 August 2002 Fourth solar conjunction: 7 September - 25 September 2004.

In late October, MGS MOC will mark the start of its fourth Mars year since the beginning of the Mapping Phase of the mission in March 1999. MGS and MOC have already been orbiting Mars for more than 4 Mars years, including the pre-Mapping aerobrake and science phasing orbit insertion periods.

Overcoming Sequence Misalignments with Weighted Structural Superposition

PubMed Central

Khazanov, Nickolay A.; Damm-Ganamet, Kelly L.; Quang, Daniel X.; Carlson, Heather A.

2012-01-01

An appropriate structural superposition identifies similarities and differences between homologous proteins that are not evident from sequence alignments alone. We have coupled our Gaussian-weighted RMSD (wRMSD) tool with a sequence aligner and seed extension (SE) algorithm to create a robust technique for overlaying structures and aligning sequences of homologous proteins (HwRMSD). HwRMSD overcomes errors in the initial sequence alignment that would normally propagate into a standard RMSD overlay. SE can generate a corrected sequence alignment from the improved structural superposition obtained by wRMSD. HwRMSD’s robust performance and its superiority over standard RMSD are demonstrated over a range of homologous proteins. Its better overlay results in corrected sequence alignments with good agreement to HOMSTRAD. Finally, HwRMSD is compared to established structural alignment methods: FATCAT, SSM, CE, and Dalilite. Most methods are comparable at placing residue pairs within 2 Å, but HwRMSD places many more residue pairs within 1 Å, providing a clear advantage. Such high accuracy is essential in drug design, where small distances can have a large impact on computational predictions. This level of accuracy is also needed to correct sequence alignments in an automated fashion, especially for omics-scale analysis. HwRMSD can align homologs with low sequence identity and large conformational differences, cases where both sequence-based and structural-based methods may fail. The HwRMSD pipeline overcomes the dependency of structural overlays on initial sequence pairing and removes the need to determine the best sequence-alignment method, substitution matrix, and gap parameters for each unique pair of homologs. PMID:22733542

Superposition and alignment of labeled point clouds.

PubMed

Fober, Thomas; Glinca, Serghei; Klebe, Gerhard; Hüllermeier, Eyke

2011-01-01

Geometric objects are often represented approximately in terms of a finite set of points in three-dimensional euclidean space. In this paper, we extend this representation to what we call labeled point clouds. A labeled point cloud is a finite set of points, where each point is not only associated with a position in three-dimensional space, but also with a discrete class label that represents a specific property. This type of model is especially suitable for modeling biomolecules such as proteins and protein binding sites, where a label may represent an atom type or a physico-chemical property. Proceeding from this representation, we address the question of how to compare two labeled points clouds in terms of their similarity. Using fuzzy modeling techniques, we develop a suitable similarity measure as well as an efficient evolutionary algorithm to compute it. Moreover, we consider the problem of establishing an alignment of the structures in the sense of a one-to-one correspondence between their basic constituents. From a biological point of view, alignments of this kind are of great interest, since mutually corresponding molecular constituents offer important information about evolution and heredity, and can also serve as a means to explain a degree of similarity. In this paper, we therefore develop a method for computing pairwise or multiple alignments of labeled point clouds. To this end, we proceed from an optimal superposition of the corresponding point clouds and construct an alignment which is as much as possible in agreement with the neighborhood structure established by this superposition. We apply our methods to the structural analysis of protein binding sites.

Location of acoustic radiators and inversion for energy density using radio-frequency sources and thunder recordings

NASA Astrophysics Data System (ADS)

Anderson, J.; Johnson, J. B.; Arechiga, R. O.; Edens, H. E.; Thomas, R. J.

2011-12-01

We use radio frequency (VHF) pulse locations mapped with the New Mexico Tech Lightning Mapping Array (LMA) to study the distribution of thunder sources in lightning channels. A least squares inversion is used to fit channel acoustic energy radiation with broadband (0.01 to 500 Hz) acoustic recordings using microphones deployed local (< 10 km) to the lightning. We model the thunder (acoustic) source as a superposition of line segments connecting the LMA VHF pulses. An optimum branching algorithm is used to reconstruct conductive channels delineated by VHF sources, which we discretize as a superposition of finely-spaced (0.25 m) acoustic point sources. We consider total radiated thunder as a weighted superposition of acoustic waves from individual channels, each with a constant current along its length that is presumed to be proportional to acoustic energy density radiated per unit length. Merged channels are considered as a linear sum of current-carrying branches and radiate proportionally greater acoustic energy. Synthetic energy time series for a given microphone location are calculated for each independent channel. We then use a non-negative least squares inversion to solve for channel energy densities to match the energy time series determined from broadband acoustic recordings across a 4-station microphone network. Events analyzed by this method have so far included 300-1000 VHF sources, and correlations as high as 0.5 between synthetic and recorded thunder energy were obtained, despite the presence of wind noise and 10-30 m uncertainty in VHF source locations.

Polygons in Martian Frost

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-428, 21 July 2003

This June 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a polygonal pattern developed in seasonal carbon dioxide frost in the martian southern hemisphere. The frost accumulated during the recent southern winter; it is now spring, and the carbon dioxide frost is subliming away. This image is located near 80.4oS, 200.2oW; it is illuminated by sunlight from the upper left, and covers an area 3 km (1.9 mi) across.

Polar Landforms

NASA Technical Reports Server (NTRS)

2005-01-01

10 August 2005 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows eroded remnants of carbon dioxide ice in the south polar residual cap of Mars. The scarps that outline each small mesa have retreated about 3 meters (10 feet) per Mars year since MGS began orbiting the red planet in 1997.

Location near: 87.0oS, 31.9oW Image width: width: 3 km (1.9 mi) Illumination from: upper left Season: Southern Spring

Large, Windblown Ripples

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-447, 9 August 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows the plethora of large, windblown ripples (or small dunes) among wind-sculpted sedimentary rocks in eastern Candor Chasma. Candor Chasma is one of the troughs of the Valles Marineris, a system of chasms that would stretch all the way across North America if it were on Earth. This picture is located near 7.9oS, 64.9oW. Sunlight illuminates the scene from the left/upper left.

Large Windblown Ripples

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-519, 20 October 2003

This April 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) high resolution image shows a depression in the martian southern cratered highlands near 1.3oS, 244.3oW. The floor of the depression and some nearby craters are covered by large windblown ripples or small sand dunes. This image of ancient martian terrain covers an area 3 km (1.9 mi) across and is illuminated by sunlight from the upper left.

A novel imaging technique for measuring kinematics of light-weight flexible structures.

PubMed

Zakaria, Mohamed Y; Eliethy, Ahmed S; Canfield, Robert A; Hajj, Muhammad R

2016-07-01

A new imaging algorithm is proposed to capture the kinematics of flexible, thin, light structures including frequencies and motion amplitudes for real time analysis. The studied case is a thin flexible beam that is preset at different angles of attack in a wind tunnel. As the angle of attack is increased beyond a critical value, the beam was observed to undergo a static deflection that is ensued by limit cycle oscillations. Imaging analysis of the beam vibrations shows that the motion consists of a superposition of the bending and torsion modes. The proposed algorithm was able to capture the oscillation amplitudes as well as the frequencies of both bending and torsion modes. The analysis results are validated through comparison with measurements from a piezoelectric sensor that is attached to the beam at its root.

Quantum Associative Neural Network with Nonlinear Search Algorithm

NASA Astrophysics Data System (ADS)

Zhou, Rigui; Wang, Huian; Wu, Qian; Shi, Yang

2012-03-01

Based on analysis on properties of quantum linear superposition, to overcome the complexity of existing quantum associative memory which was proposed by Ventura, a new storage method for multiply patterns is proposed in this paper by constructing the quantum array with the binary decision diagrams. Also, the adoption of the nonlinear search algorithm increases the pattern recalling speed of this model which has multiply patterns to O( {log2}^{2^{n -t}} ) = O( n - t ) time complexity, where n is the number of quantum bit and t is the quantum information of the t quantum bit. Results of case analysis show that the associative neural network model proposed in this paper based on quantum learning is much better and optimized than other researchers' counterparts both in terms of avoiding the additional qubits or extraordinary initial operators, storing pattern and improving the recalling speed.

Single shot multi-wavelength phase retrieval with coherent modulation imaging.

PubMed

Dong, Xue; Pan, Xingchen; Liu, Cheng; Zhu, Jianqiang

2018-04-15

A single shot multi-wavelength phase retrieval method is proposed by combining common coherent modulation imaging (CMI) and a low rank mixed-state algorithm together. A radiation beam consisting of multi-wavelength is illuminated on the sample to be observed, and the exiting field is incident on a random phase plate to form speckle patterns, which is the incoherent superposition of diffraction patterns of each wavelength. The exiting complex amplitude of the sample including both the modulus and phase of each wavelength can be reconstructed simultaneously from the recorded diffraction intensity using a low rank mixed-state algorithm. The feasibility of this proposed method was verified with visible light experimentally. This proposed method not only makes CMI realizable with partially coherent illumination but also can extend its application to various traditionally unrelated fields, where several wavelengths should be considered simultaneously.

A novel imaging technique for measuring kinematics of light-weight flexible structures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zakaria, Mohamed Y., E-mail: zakaria@vt.edu; Eliethy, Ahmed S.; Canfield, Robert A.

2016-07-15

A new imaging algorithm is proposed to capture the kinematics of flexible, thin, light structures including frequencies and motion amplitudes for real time analysis. The studied case is a thin flexible beam that is preset at different angles of attack in a wind tunnel. As the angle of attack is increased beyond a critical value, the beam was observed to undergo a static deflection that is ensued by limit cycle oscillations. Imaging analysis of the beam vibrations shows that the motion consists of a superposition of the bending and torsion modes. The proposed algorithm was able to capture the oscillationmore » amplitudes as well as the frequencies of both bending and torsion modes. The analysis results are validated through comparison with measurements from a piezoelectric sensor that is attached to the beam at its root.« less

Macroscopicity of quantum superpositions on a one-parameter unitary path in Hilbert space

NASA Astrophysics Data System (ADS)

Volkoff, T. J.; Whaley, K. B.

2014-12-01

We analyze quantum states formed as superpositions of an initial pure product state and its image under local unitary evolution, using two measurement-based measures of superposition size: one based on the optimal quantum binary distinguishability of the branches of the superposition and another based on the ratio of the maximal quantum Fisher information of the superposition to that of its branches, i.e., the relative metrological usefulness of the superposition. A general formula for the effective sizes of these states according to the branch-distinguishability measure is obtained and applied to superposition states of N quantum harmonic oscillators composed of Gaussian branches. Considering optimal distinguishability of pure states on a time-evolution path leads naturally to a notion of distinguishability time that generalizes the well-known orthogonalization times of Mandelstam and Tamm and Margolus and Levitin. We further show that the distinguishability time provides a compact operational expression for the superposition size measure based on the relative quantum Fisher information. By restricting the maximization procedure in the definition of this measure to an appropriate algebra of observables, we show that the superposition size of, e.g., NOON states and hierarchical cat states, can scale linearly with the number of elementary particles comprising the superposition state, implying precision scaling inversely with the total number of photons when these states are employed as probes in quantum parameter estimation of a 1-local Hamiltonian in this algebra.

A Meier-Gorlin syndrome mutation impairs the ORC1-nucleosome association.

PubMed

Zhang, Wei; Sankaran, Saumya; Gozani, Or; Song, Jikui

2015-05-15

Recent studies have identified several genetic mutations within the BAH domain of human Origin Recognition Complex subunit 1 (hORC1BAH), including the R105Q mutation, implicated in Meier-Gorlin Syndrome (MGS). However, the pathological role of the hORC1 R105Q mutation remains unclear. In this study, we have investigated the interactions of the hORC1BAH domain with histone H4K20me2, DNA, and the nucleosome core particle labeled with H4Kc20me2, a chemical analog of H4K20me2. Our study revealed a nucleosomal DNA binding site for hORC1BAH. The R105Q mutation reduces the hORC1BAH-DNA binding affinity, leading to impaired hORC1BAH-nucleosome interaction, which likely influences DNA replication initiation and MGS pathogenesis. This study provides an etiologic link between the hORC1 R105Q mutation and MGS.

Layered, massive and thin sediments on Mars: Possible Late Noachian to Late Amazonian tephra?

USGS Publications Warehouse

Chapman, M.G.

2002-01-01

Data from instruments on the currently orbiting Mars Global Surveyor (MGS) suggest that as an alternative interpretation to lacustrine deposits, widespread sediments on Mars may be tephra deposits of variable age, formed in part by volcano-ice interactions. The materials are often associated with outcrops of mapped geological units that have each been previously interpreted as volcanic ash deposits with identified, but unconfirmed possible volcanic vents. Spectral investigation indicates that although some outcrops are basaltic, many show moderate to high concentrations of andesite, a composition at which large explosive eruptions may be possible. In addition, many outcrops are in areas suspected to be water/ice rich. On Earth, magma and groundwater can react to create violent explosive eruptions. Observations from MGS support a pyroclastic mechanism of deposition and show some morphologies consistent with volcano-ice interactions, including subaqueous eruptions. Perhaps MGS data are finally producing more definitive evidence of the widespread tephra that were predicted to be likely in the reduced atmospheric pressure of Mars.

Inhibitory effect of etodolac, a selective cyclooxygenase-2 inhibitor, on stomach carcinogenesis in Helicobacter pylori-infected Mongolian gerbils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Magari, Hirohito; Shimizu, Yasuhito; Inada, Ken-ichi

2005-08-26

The effect of the selective COX-2 inhibitor, etodolac, on Helicobacter pylori (Hp)-associated stomach carcinogenesis was investigated in Mongolian gerbils (MGs). Hp-infected MGs were fed for 23 weeks with drinking water containing 10 ppm N-methyl-N-nitrosourea. They were then switched to distilled water and placed on a diet containing 5-30 mg/kg/day etodolac for 30 weeks. We found that etodolac dose-dependently inhibited the development of gastric cancer, and no cancer was detected at a dose of 30 mg/kg/day. Etodolac did not affect the extent of inflammatory cell infiltration or oxidative DNA damage, but it significantly inhibited mucosal cell proliferation and dose-dependently repressed themore » development of intestinal metaplasia in the stomachs of Hp-infected MGs. These results suggest that COX-2 is a key molecule in inflammation-mediated stomach carcinogenesis and that chemoprevention of stomach cancer should be possible by controlling COX-2 expression or activity.« less

MAVEN Mapping of Plasma Clouds Near Mars

NASA Astrophysics Data System (ADS)

Hurley, D.; Tran, T.; DiBraccio, G. A.; Espley, J. R.; Soobiah, Y. I. J.

2017-12-01

Brace et al. identified parcels of ionospheric plasma above the nominal ionosphere of Venus, dubbed plasma clouds. These were envisioned as instabilities on the ionopause that evolved to escaping parcels of ionospheric plasma. Mars Global Surveyor (MGS) Electron Reflectometer (ER) also detected signatures of ionospheric plasma above the nominal ionopause of Mars. Initial examination of the MGS ER data suggests that plasma clouds are more prevalent at Mars than at Venus, and similarly exhibit a connection to rotations in the upstream Interplanetary Magnetic Field (IMF) as Zhang et al. showed at Venus. We examine electron data from Mars to determine the locations of plasma clouds in the near-Mars environment using MGS and MAVEN data. The extensive coverage of the MAVEN orbit enables mapping an occurrence rate of the photoelectron spectra in Solar Wind Electron Analyzer (SWEA) data spanning all relevant altitudes and solar zenith angles. Martian plasma clouds are observed near the terminator like at Venus. They move to higher altitude as solar zenith angle increases, consistent with the escaping plasma hypothesis.

Mechanism suppressing glycogen synthesis in neurons and its demise in progressive myoclonus epilepsy.

PubMed

Vilchez, David; Ros, Susana; Cifuentes, Daniel; Pujadas, Lluís; Vallès, Jordi; García-Fojeda, Belén; Criado-García, Olga; Fernández-Sánchez, Elena; Medraño-Fernández, Iria; Domínguez, Jorge; García-Rocha, Mar; Soriano, Eduardo; Rodríguez de Córdoba, Santiago; Guinovart, Joan J

2007-11-01

Glycogen synthesis is normally absent in neurons. However, inclusion bodies resembling abnormal glycogen accumulate in several neurological diseases, particularly in progressive myoclonus epilepsy or Lafora disease. We show here that mouse neurons have the enzymatic machinery for synthesizing glycogen, but that it is suppressed by retention of muscle glycogen synthase (MGS) in the phosphorylated, inactive state. This suppression was further ensured by a complex of laforin and malin, which are the two proteins whose mutations cause Lafora disease. The laforin-malin complex caused proteasome-dependent degradation both of the adaptor protein targeting to glycogen, PTG, which brings protein phosphatase 1 to MGS for activation, and of MGS itself. Enforced expression of PTG led to glycogen deposition in neurons and caused apoptosis. Therefore, the malin-laforin complex ensures a blockade of neuronal glycogen synthesis even under intense glycogenic conditions. Here we explain the formation of polyglucosan inclusions in Lafora disease by demonstrating a crucial role for laforin and malin in glycogen synthesis.

Morning glory syndrome associated with primary open angle glaucoma--case report.

PubMed

Bozić, Marija; Hentova-Senćanić, Paraskeva; Marković, Vujica; Marjanović, Ivan

2014-01-01

Morning glory syndrome (MGS) is a rare congenital optic disc anomaly, first reported in 1970. MGS is a nonprogressive and untreatable condition, which usually occurs as an isolated ocular anomaly, and can be associated with the increased incidence of nonrhegmatogenous retinal detachment, and also with strabismus, afferent pupillary defect, visual field defects, presence of hyaloids artery remnants, ciliary body cyst, congenital cataract, lid hemangioma and preretinal gliosis. We report a clinical case of MGS associated with primary open angle glaucoma. The use of sophisticated diagnostic tools, such as retinal tomography and visual field testing is limited if multiple eye conditions are present, since optic disc does not have "usual" appearance that can be analyzed according to standard statistical databases. In treating and follow up of glaucoma cases associated with other diseases and conditions that affect the appearance and function of the optic nerve head, sometimes the use of modern technological methods is limited due to difficult interpretation of the obtained results.

Emergence of medicine for mass gatherings: lessons from the Hajj.

PubMed

Memish, Ziad A; Stephens, Gwen M; Steffen, Robert; Ahmed, Qanta A

2012-01-01

Although definitions of mass gatherings (MG) vary greatly, they consist of large numbers of people attending an event at a specific site for a finite time. Examples of MGs include World Youth Day, the summer and winter Olympics, rock concerts, and political rallies. Some of the largest MGs are spiritual in nature. Among all MGs, the public health issues, associated with the Hajj (an annual pilgrimage to Mecca, Saudi Arabia) is clearly the best reported-probably because of its international or even intercontinental implications in terms of the spread of infectious disease. Hajj routinely attracts 2·5 million Muslims for worship. WHO's global health initiatives have converged with Saudi Arabia's efforts to ensure the wellbeing of pilgrims, contain infectious diseases, and reinforce global health security through the management of the Hajj. Both initiatives emphasise the importance of MG health policies guided by sound evidence and based on experience and the timeliness of calls for a new academic science-based specialty of MG medicine. Copyright © 2012 Elsevier Ltd. All rights reserved.

Communication: Two measures of isochronal superposition

NASA Astrophysics Data System (ADS)

Roed, Lisa Anita; Gundermann, Ditte; Dyre, Jeppe C.; Niss, Kristine

2013-09-01

A liquid obeys isochronal superposition if its dynamics is invariant along the isochrones in the thermodynamic phase diagram (the curves of constant relaxation time). This paper introduces two quantitative measures of isochronal superposition. The measures are used to test the following six liquids for isochronal superposition: 1,2,6 hexanetriol, glycerol, polyphenyl ether, diethyl phthalate, tetramethyl tetraphenyl trisiloxane, and dibutyl phthalate. The latter four van der Waals liquids obey isochronal superposition to a higher degree than the two hydrogen-bonded liquids. This is a prediction of the isomorph theory, and it confirms findings by other groups.

Communication: Two measures of isochronal superposition.

PubMed

Roed, Lisa Anita; Gundermann, Ditte; Dyre, Jeppe C; Niss, Kristine

2013-09-14

A liquid obeys isochronal superposition if its dynamics is invariant along the isochrones in the thermodynamic phase diagram (the curves of constant relaxation time). This paper introduces two quantitative measures of isochronal superposition. The measures are used to test the following six liquids for isochronal superposition: 1,2,6 hexanetriol, glycerol, polyphenyl ether, diethyl phthalate, tetramethyl tetraphenyl trisiloxane, and dibutyl phthalate. The latter four van der Waals liquids obey isochronal superposition to a higher degree than the two hydrogen-bonded liquids. This is a prediction of the isomorph theory, and it confirms findings by other groups.

THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures

PubMed Central

Theobald, Douglas L.; Wuttke, Deborah S.

2008-01-01

Summary THESEUS is a command line program for performing maximum likelihood (ML) superpositions and analysis of macromolecular structures. While conventional superpositioning methods use ordinary least-squares (LS) as the optimization criterion, ML superpositions provide substantially improved accuracy by down-weighting variable structural regions and by correcting for correlations among atoms. ML superpositioning is robust and insensitive to the specific atoms included in the analysis, and thus it does not require subjective pruning of selected variable atomic coordinates. Output includes both likelihood-based and frequentist statistics for accurate evaluation of the adequacy of a superposition and for reliable analysis of structural similarities and differences. THESEUS performs principal components analysis for analyzing the complex correlations found among atoms within a structural ensemble. PMID:16777907

Outcomes of different Class II treatments : Comparisons using the American Board of Orthodontics Model Grading System.

PubMed

Akinci Cansunar, Hatice; Uysal, Tancan

2016-07-01

The aim of this study was to evaluate the clinical outcomes of three different Class II treatment modalities followed by fixed orthodontic therapy, using the American Board of Orthodontics Model Grading System (ABO-MGS). As a retrospective study, files of patients treated at postgraduate orthodontic  clinics in different cities in Turkey was randomly selected. From 1684 posttreatment records, 669 patients were divided into three groups: 269 patients treated with extraction of two upper premolars, 198 patients treated with cervical headgear, and 202 patients treated with functional appliances. All the cases were evaluated by one researcher using ABO-MGS. The χ (2), Z test, and multivariate analysis of variance were used for statistical evaluation (p < 0.05). No significant differences were found among the groups in buccolingual inclination, overjet, occlusal relationship, and root angulation. However, there were significant differences in alignment, marginal ridge height, occlusal contact, interproximal contact measurements, and overall MGS average scores. The mean treatment time between the extraction and functional appliance groups was significantly different (p = 0.017). According to total ABO-MGS scores, headgear treatment had better results than functional appliances. The headgear group had better tooth alignment than the extraction group. Headgear treatment resulted in better occlusal contacts than the functional appliances and had lower average scores for interproximal contact measurements. Functional appliances had the worst average scores for marginal ridge height. Finally, the functional appliance group had the longest treatment times.

Intracellular magnesium concentrations in dogs with gastric dilatation-volvulus.

PubMed

Bebchuk, T N; Hauptman, J G; Braselton, W E; Walshaw, R

2000-11-01

To quantify and compare intracellular magnesium concentrations (Mgi) in clinically normal dogs (control dogs) and dogs that have gastric dilatation-volvulus (GDV dogs) and to determine whether there is a difference in Mgi and serum magnesium concentrations (Mgs) between GDV dogs with and without cardiac arrhythmias. 41 control dogs and 21 GDV dogs. Rectus abdominis muscle specimens were obtained from control and GDV dogs for determination of Mgi. Blood samples were obtained from GDV dogs for determination of Mgs, and dogs were monitored for 48 hours for cardiac arrhythmias. Muscle specimens were frozen at -40 C, oven dried at 95 C, and digested with concentrated nitric acid. Multielemental analyses were performed by simultaneous/sequential inductively coupled plasma-atomic emission spectroscopy with fixed-cross flow nebulization. The Mg, was standardized to sulfur content to correct for the amount of fat and fascia in the muscle specimen. Mean (+/- SEM) values were recorded in parts per million (ppm). Results-There were no significant differences in Mgi between control (627 +/- 11.1 ppm) and GDV (597 +/- 20.5 ppm) dogs, in Mgi between GDV dogs with (590 +/- 34 ppm) and without (584 +/- 29 ppm) cardiac arrhythmias, and in Mgs between GDV dogs with (1.77 +/- 0.26 ppm) and without (1.51 +/- 0.09 ppm) cardiac arrhythmias. There was no correlation between Mgs and Mgi (R2 = 0.0001). Results indicate that Mg depletion is not pathophysiologically important in dogs with GDV and does not play a role in the cardiac arrhythmias detected in these patients.

Spectroscopy of the X^1Σ^+, A^1Π and B^1Σ^+ Electronic States of MgS

NASA Astrophysics Data System (ADS)

Caron, Nicholas; Tokaryk, Dennis W.; Adam, Allan G.; Linton, Colan

2016-06-01

The spectra of some astrophysical sources contain signatures from molecules containing magnesium or sulphur atoms. Therefore, we have extended previous studies of the diatomic molecule MgS, which is a possible candidate for astrophysical detection. Microwave spectra of X^1Σ^+ , the ground electronic state, were reported in 1989 and 1997, and the B^1Σ^+-X^1Σ^+ electronic absorption spectrum in the blue was last studied in 1970. We have investigated the B^1Σ^+-X^1Σ^+ 0-0 spectrum of MgS at high resolution under jet-cooled conditions in a laser-ablation molecular source, and have obtained laser-induced fluorescence spectra from four isotopologues. Dispersed fluorescence from this source identified the low-lying A^1Π state near 4520 wn. We also created MgS in a Broida oven, with the help of a stream of activated nitrogen, and took rotationally resolved dispersed fluorescence spectra of the B^1Σ^+-A^1Π transition with a grating spectrometer by laser excitation of individual rotational levels of the B^1Σ^+ state via the B^1Σ^+-X^1Σ^+ transition. These spectra provide a first observation and analysis of the A^1Π state. S. Takano, S. Yamamoto and S. Saito, Chem. Phys. Lett. 159, 563-566 (1989) K. A. Walker and M. C. L. Gerry, J. Mol. Spectrosc 182, 178-183 (1997) M. Marcano and R. F. Barrow, Trans. Faraday Soc. 66, 2936-2938 (1970)

Correlations between dynamics and atomic structures in Cu64.5Zr35.5 metallic glass

NASA Astrophysics Data System (ADS)

Wang, C. Z.; Zhang, Y.; Zhang, F.; Mendelev, M. I.; Kramer, M. J.; Ho, K. M.

2015-03-01

The atomic structure of Cu-Zr metallic glasses (MGs) has been widely accepted to be heterogeneous and dominated by icosahedral short range order (ISRO). However, the correlations between dynamics and atomic structures in Cu-Zr MGs remain an enigma. Using molecular dynamics (MD) simulations, we investigated the correlations between dynamics and atomic structures in Cu64.5Zr35.5 MG. The atomic structures are characterized using ISRO and the Bergman-type medium range order (BMRO). The simulation and analysis results show that the majority of the mobile atoms are not involved in ISRO or BMRO, indicating that the dynamical heterogeneity has a strong correlation to structural heterogeneity. Moreover, we found that the localized soft vibration modes below 1.0 THz are mostly concentrated on the mobile atoms. The diffusion was studied using the atomic trajectory collected in an extended time interval of 1.2 μs at 700 K in MD simulations. It was found that the long range diffusion in MGs is highly heterogeneous, which is confined to the liquid-like regions and strongly avoids the ISRO and the Bergman-type MRO. All These results clearly demonstrate strong correlations between dynamics (in terms of dynamical heterogeneity and diffusion) and atomic structures in Cu64.5Zr35.5 MGs. This work was supported by the U.S. Department of Energy, Basic Energy Sciences, Division of Materials Science and Engineering under the Contract No. DE-AC02-07CH11358.

HUBBLE WATCHES THE RED PLANET AS MARS GLOBAL SURVEYOR BEGINS AEROBRAKING

NASA Technical Reports Server (NTRS)

2002-01-01

his NASA Hubble Space Telescope picture of Mars was taken on Sept. 12, one day after the arrival of the Mars Global Surveyor (MGS) spacecraft and only five hours before the beginning of autumn in the Martian northern hemisphere. (Mars is tilted on its axis like Earth, so it has similar seasonal changes, including an autumnal equinox when the Sun crosses Mars' equator from the northern to the southern hemisphere). This Hubble picture was taken in support of the MGS mission. Hubble is monitoring the Martian weather conditions during the early phases of MGS aerobraking; in particular, the detection of large dust storms are important inputs into the atmospheric models used by the MGS mission to plan aerobraking operations. Though a dusty haze fills the giant Hellas impact basin south of the dark fin-shaped feature Syrtis Major, the dust appears to be localized within Hellas. Unless the region covered expands significantly, the dust will not be of concern for MGS aerobraking. Other early signs of seasonal transitions on Mars are apparent in the Hubble picture. The northern polar ice cap is blanketed under a polar hood of clouds that typically start forming in late northern summer. As fall progresses, sunlight will dwindle in the north polar region and the seasonal polar cap of frozen carbon dioxide will start condensing onto the surface under these clouds. Hubble observations will continue until October 13, as MGS carefully uses the drag of the Martian atmosphere to circularize its orbit about the Red Planet. After mid-October, Mars will be too close to the Sun, in angular separation, for Hubble to safely view. The image is a composite of three separately filtered colored images taken with the Wide Field Planetary Camera 2 (WFPC2). Resolution is 35 miles (57 kilometers) per pixel (picture element). The Pathfinder landing site near Ares Valles is about 2200 miles (3600 kilometers) west of the center of this image, so was not visible during this observation. Mars was 158 million miles (255 million kilometers) from Earth at the time. [LEFT] An image of this region of Mars, taken in June 1997, is shown for comparison. The Hellas basin is filled with bright clouds and/or surface frost. More water ice clouds are visible across the planet than in the Sept. image, reflecting the effects of the changing season. Mars appears larger because it was 44 million miles (77 million kilometers) closer to Earth than in the September image. Credit: Phil James (Univ. Toledo) and Steve Lee (Univ. Colorado), and NASA

SNP Discovery for mapping alien introgressions in wheat

PubMed Central

2014-01-01

Background Monitoring alien introgressions in crop plants is difficult due to the lack of genetic and molecular mapping information on the wild crop relatives. The tertiary gene pool of wheat is a very important source of genetic variability for wheat improvement against biotic and abiotic stresses. By exploring the 5Mg short arm (5MgS) of Aegilops geniculata, we can apply chromosome genomics for the discovery of SNP markers and their use for monitoring alien introgressions in wheat (Triticum aestivum L). Results The short arm of chromosome 5Mg of Ae. geniculata Roth (syn. Ae. ovata L.; 2n = 4x = 28, UgUgMgMg) was flow-sorted from a wheat line in which it is maintained as a telocentric chromosome. DNA of the sorted arm was amplified and sequenced using an Illumina Hiseq 2000 with ~45x coverage. The sequence data was used for SNP discovery against wheat homoeologous group-5 assemblies. A total of 2,178 unique, 5MgS-specific SNPs were discovered. Randomly selected samples of 59 5MgS-specific SNPs were tested (44 by KASPar assay and 15 by Sanger sequencing) and 84% were validated. Of the selected SNPs, 97% mapped to a chromosome 5Mg addition to wheat (the source of t5MgS), and 94% to 5Mg introgressed from a different accession of Ae. geniculata substituting for chromosome 5D of wheat. The validated SNPs also identified chromosome segments of 5MgS origin in a set of T5D-5Mg translocation lines; eight SNPs (25%) mapped to TA5601 [T5DL · 5DS-5MgS(0.75)] and three (8%) to TA5602 [T5DL · 5DS-5MgS (0.95)]. SNPs (gsnp_5ms83 and gsnp_5ms94), tagging chromosome T5DL · 5DS-5MgS(0.95) with the smallest introgression carrying resistance to leaf rust (Lr57) and stripe rust (Yr40), were validated in two released germplasm lines with Lr57 and Yr40 genes. Conclusion This approach should be widely applicable for the identification of species/genome-specific SNPs. The development of a large number of SNP markers will facilitate the precise introgression and monitoring of alien segments in crop breeding programs and further enable mapping and cloning novel genes from the wild relatives of crop plants. PMID:24716476

Estimation of Viscoelastic Properties of Cells Using Acoustic Tweezing Cytometry.

PubMed

Yang, Chunmei; Chen, Di; Hong, Xiaowei

2016-12-01

Recently developed acoustic tweezing cytometry uses ultrasound-responsive targeted microbubbles for biomechanical stimulation of live cells at the subcellular level. The purpose of this research was to estimate the viscoelastic characteristics of cells from the displacements of cell-bound microbubbles in response to ultrasound pulses on acoustic tweezing cytometry. Microbubbles were bound to NIH/3T3 fibroblasts and ATDC5 cells through an integrin-cytoskeleton linkage. The evolution of microbubble behaviors under irradiation by ultrasound pulses was captured by a high-speed camera and tracked by a customized algorithm. The total damping constant, stiffness, and rigidity of the cells were estimated by fitting the measured temporal displacement profiles to a Kelvin-Voigt-based model. The mean maximum displacement of the microbubbles attached to NIH/3T3 fibroblasts was much greater than that for ATDC5 cells. The mean fitted damping constant and stiffness ± SD for ATDC5 cells were 28.16 ± 7.08 mg/s and 0.5041 ± 0.1381 mN/m, respectively, and the values for NIH/3T3 fibroblasts were 13.12 ± 4.23 mg/s and 0.2591 ± 0.0715 mN/m. The rigidity for ATDC5 cells was 331.46 ± 106.50 MPa, whereas that for NIH/3T3 fibroblasts was 117.92 ± 34.83 MPa. The Arg-Gly-Asp-integrin-cytoskeleton system of NIH/3T3 fibroblasts appears to be softer than that of ATDC5 cells. The rigidity of ATDC5 cells was significantly greater than that of NIH/3T3 fibroblasts at the 95% confidence level. This strategy provides a novel way to determine the viscoelastic properties of the live cells. © 2016 by the American Institute of Ultrasound in Medicine.

Quantum random access memory.

PubMed

Giovannetti, Vittorio; Lloyd, Seth; Maccone, Lorenzo

2008-04-25

A random access memory (RAM) uses n bits to randomly address N=2(n) distinct memory cells. A quantum random access memory (QRAM) uses n qubits to address any quantum superposition of N memory cells. We present an architecture that exponentially reduces the requirements for a memory call: O(logN) switches need be thrown instead of the N used in conventional (classical or quantum) RAM designs. This yields a more robust QRAM algorithm, as it in general requires entanglement among exponentially less gates, and leads to an exponential decrease in the power needed for addressing. A quantum optical implementation is presented.

F-wave decomposition for time of arrival profile estimation.

PubMed

Han, Zhixiu; Kong, Xuan

2007-01-01

F-waves are distally recorded muscle responses that result from "backfiring" of motor neurons following stimulation of peripheral nerves. Each F-wave response is a superposition of several motor unit responses (F-wavelets). Initial deflection of the earliest F-wavelet defines the traditional F-wave latency (FWL) and earlier F-wavelet may mask F-wavelets traveling along slower (and possibly diseased) fibers. Unmasking the time of arrival (TOA) of late F-wavelets could improve the diagnostic value of the F-waves. An algorithm for F-wavelet decomposition is presented, followed by results of experimental data analysis.

An Automated Algorithm for Identifying and Tracking Transverse Waves in Solar Images

NASA Astrophysics Data System (ADS)

Weberg, Micah J.; Morton, Richard J.; McLaughlin, James A.

2018-01-01

Recent instrumentation has demonstrated that the solar atmosphere supports omnipresent transverse waves, which could play a key role in energizing the solar corona. Large-scale studies are required in order to build up an understanding of the general properties of these transverse waves. To help facilitate this, we present an automated algorithm for identifying and tracking features in solar images and extracting the wave properties of any observed transverse oscillations. We test and calibrate our algorithm using a set of synthetic data, which includes noise and rotational effects. The results indicate an accuracy of 1%–2% for displacement amplitudes and 4%–10% for wave periods and velocity amplitudes. We also apply the algorithm to data from the Atmospheric Imaging Assembly on board the Solar Dynamics Observatory and find good agreement with previous studies. Of note, we find that 35%–41% of the observed plumes exhibit multiple wave signatures, which indicates either the superposition of waves or multiple independent wave packets observed at different times within a single structure. The automated methods described in this paper represent a significant improvement on the speed and quality of direct measurements of transverse waves within the solar atmosphere. This algorithm unlocks a wide range of statistical studies that were previously impractical.

Polygon Patterns

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-511, 12 October 2003

This August 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows polygon patterns, enhanced by frost in the cracks that outline the polygon forms, in the south polar region of Mars. On Earth, patterns such as this usually indicate the presence of ice in the subsurface. The same might be true for Mars. This picture is located near 70.6oS, 309.5oW, and covers an area 3 km (1.9 mi) wide. The image is illuminated by sunlight from the upper left.

Northeast Hellas Landscape

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-446, 8 August 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image of pitted terrain northeast of Hellas Basin shows light-toned outcrops of layered, sedimentary rock, and a valley floor covered by large, dark ripples or small dunes. Similar light-toned sedimentary materials are found throughout the region immediately northeast of Hellas, and in the crater, Terby. The area shown is 3 km (1.9 mi) wide and located near 27.5oS, 281.7oW. Sunlight illuminates the scene from the upper left.

A wetter, younger Mars emerging.

PubMed

Kerr, R A

2000-08-04

Most researchers have believed that the days were long gone when water splashed on the surface of Mars or even near it. Now continuing analyses of martian meteorites and stunning images from the Mars Global Surveyor (MGS), which has been in orbit since 1997, are breathing new life into the Red Planet. Last month's announcement that the camera aboard MGS had spied signs of geologically recent--possibly even ongoing--water seeps has caught everyone's attention. Other, perhaps more persuasive, signs also suggest that water may even now flow on or beneath the frigid surface.

The Use of Laser Altimetry in the Orbit and Attitude Determination of Mars Global Surveyor

NASA Technical Reports Server (NTRS)

Rowlands, D. D.; Pavlis, D. E.; Lemoine, F. G.; Neumann, G. A.; Luthcke, S. B.

1999-01-01

Altimetry from the Mars Observer Laser Altimeter (MOLA) which is carried on board Mars Global Surveyor (MGS) has been analyzed for the period of the MOS mission known as Science Phasing Orbit 1 (SPO-1). We have used these altimeter ranges to improve orbit and attitude knowledge for MGS. This has been accomplished by writing crossover constraint equations that have been derived from short passes of MOLA data. These constraint equations differ from traditional Crossover constraints and exploit the small foot print associated with laser altimetry.

South Polar Polygons

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-473, 4 September 2003

Looking somewhat like the roadmap of a city on Earth, this August 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows patterned ground--a mosaic of polygonal forms--highlighted by seasonal frost in the south polar region near 86.3oS, 310.2oW. Dark surfaces in this springtime view are areas from which cold, carbon dioxide frost has been subliming away. The picture covers an area 3 km (1.9 mi) across and is illuminated by sunlight from the upper left.

Improved quantum backtracking algorithms using effective resistance estimates

NASA Astrophysics Data System (ADS)

Jarret, Michael; Wan, Kianna

2018-02-01

We investigate quantum backtracking algorithms of the type introduced by Montanaro (Montanaro, arXiv:1509.02374). These algorithms explore trees of unknown structure and in certain settings exponentially outperform their classical counterparts. Some of the previous work focused on obtaining a quantum advantage for trees in which a unique marked vertex is promised to exist. We remove this restriction by recharacterizing the problem in terms of the effective resistance of the search space. In this paper, we present a generalization of one of Montanaro's algorithms to trees containing k marked vertices, where k is not necessarily known a priori. Our approach involves using amplitude estimation to determine a near-optimal weighting of a diffusion operator, which can then be applied to prepare a superposition state with support only on marked vertices and ancestors thereof. By repeatedly sampling this state and updating the input vertex, a marked vertex is reached in a logarithmic number of steps. The algorithm thereby achieves the conjectured bound of O ˜(√{T Rmax }) for finding a single marked vertex and O ˜(k √{T Rmax }) for finding all k marked vertices, where T is an upper bound on the tree size and Rmax is the maximum effective resistance encountered by the algorithm. This constitutes a speedup over Montanaro's original procedure in both the case of finding one and the case of finding multiple marked vertices in an arbitrary tree.

CFD Extraction Tool for TecPlot From DPLR Solutions

NASA Technical Reports Server (NTRS)

Norman, David

2013-01-01

This invention is a TecPlot macro of a computer program in the TecPlot programming language that processes data from DPLR solutions in TecPlot format. DPLR (Data-Parallel Line Relaxation) is a NASA computational fluid dynamics (CFD) code, and TecPlot is a commercial CFD post-processing tool. The Tec- Plot data is in SI units (same as DPLR output). The invention converts the SI units into British units. The macro modifies the TecPlot data with unit conversions, and adds some extra calculations. After unit conversions, the macro cuts a slice, and adds vectors on the current plot for output format. The macro can also process surface solutions. Existing solutions use manual conversion and superposition. The conversion is complicated because it must be applied to a range of inter-related scalars and vectors to describe a 2D or 3D flow field. It processes the CFD solution to create superposition/comparison of scalars and vectors. The existing manual solution is cumbersome, open to errors, slow, and cannot be inserted into an automated process. This invention is quick and easy to use, and can be inserted into an automated data-processing algorithm.

Homogeneous partial differential equations for superpositions of indeterminate functions of several variables

NASA Astrophysics Data System (ADS)

Asai, Kazuto

2009-02-01

We determine essentially all partial differential equations satisfied by superpositions of tree type and of a further special type. These equations represent necessary and sufficient conditions for an analytic function to be locally expressible as an analytic superposition of the type indicated. The representability of a real analytic function by a superposition of this type is independent of whether that superposition involves real-analytic functions or C^{\\rho}-functions, where the constant \\rho is determined by the structure of the superposition. We also prove that the function u defined by u^n=xu^a+yu^b+zu^c+1 is generally non-representable in any real (resp. complex) domain as f\\bigl(g(x,y),h(y,z)\\bigr) with twice differentiable f and differentiable g, h (resp. analytic f, g, h).

Intraoperative optical coherence tomography assisted analysis of pars Plana vitrectomy for retinal detachment in morning glory syndrome: a case report.

PubMed

Lytvynchuk, Lyubomyr M; Glittenberg, Carl G; Ansari-Shahrezaei, Siamak; Binder, Susanne

2017-08-01

The pathogenesis of non-rhegmatogenous retinal detachment (non-RRD) associated with morning glory syndrome (MGS) is not established, as well as best surgical approach to treat RD. Our purpose was to analyse intraoperative optical coherence tomography data (iOCT) in all steps of pars plana vitrectomy (PPV) for non-RRD in MGS, in order to follow pathophysiological aspects of the disease and to understand the tissues behaviour during surgical workflow. Intraoperative spectral domain optical coherent tomography (iSD-OCT) assisted PPV using Rescan 700 (Carl Zeiss Meditech, Jena, Germany) with epiretinal membrane (ERM) and internal retinal membrane (ILM) peeling, and air endotamponade was performed on the only eye of a 21 years old female with non-RRD associated with MGS. BCVA, pre-, intra- and postoperative OCT were performed along with standard ocular examination. iOCT video and snapshots were analysed intra- and postoperatively using post-processing approach using graphic software. The progression of non-RRD resulted in best corrected visual acuity (BCVA) decrease from 0.8 to 0.2. Triamcinolone enhanced iOCT imaging revealed strong vitreous traction and adhesion above the macula and optic disc. Internal limiting membrane was peeled under iOCT control to prevent the peeling of inner layers of the retinal schisis. No retinal break was detected, and only air endotamponade was performed. The retina reattached during first 4 weeks of follow-up with gradual resolution of intraretinal- and subretinal fluid, and remained stable in 12 months. BCVA improved to 0.8. Based on iSD-OCT findings we assume that non-RRD in this case of MGS is caused primarily by the vitreous traction with further possible formation of the retinal breaks. Retinal reattachment reached only with air endotamponade strongly advocates the tractional component of non-RRD and retinal schisis assotiated with MGS. Early PPV for central non-RRD and retinal schisis with the use of iOCT can be performed in more safe and controlled manner and has to be considered to reduce the risk of retinal break formation and to prevent the central vision loss.

The Martian Outflow Channels: Mgs Sheds New Light On Viking and Pathfinder Results

NASA Astrophysics Data System (ADS)

Lanz, J.; Jaumann, R.

The Mars Global Surveyor (MGS) Mission has, as most successful missions before, given stunningly new insights in the processes that shaped the Martian surface. But how do these findings and observations fit in the context of our pre-MGS knowledge? and do they fit at all? Combining data from the Viking, Pathfinder and MGS Missions, erosion processes in the circum-Chryse Region have been newly and extensively examined. Maximum discharge rates and flow velocities within the major outflow channels were calculated as well as sediment transport and sediment volumes eroded by the flows evaluating the erosion balance of the region. In a second step a detailed study of the available high resolution MOC-Images and lower resolution MOC and Viking context images was performed to evaluate the geologic and morphologic inventory of the outflow chan- nels. Focusing on morphologic and hydrologic differences to terrestrial outflow chan- nels as well as differences to earlier pre-MGS studies, theories and hypothesis con- cerning the outflow channels have been tested for their validity. New hydrologic cal- culations e.g. give different results than previously measured (e.g. Carr 1979, Robin- son &Tanaka 1990, Komatsu &Baker 1997). Maximum discharge rates are generally smaller (see also Williams et al. 2000), in some cases up to a factor of 2 to 3 (e.g. Ares Vallis), having a strong impact on the northern ocean theory. Some morphologic fea- tures that are typical for terrestrial flood features (such as inner channels, bar deposits, gravel dunes, etc) could not or not clearly be identified in any of the large outflow channels even in high resolution MOC-imagery. Younger resurfacing processes might have covered or obscured them. Others are hard to distinguish from non-fluvial, i.e. eo- lian, features from satellite images. Nevertheless, the overall absence of such features in the outflow channels is striking and shows again that processes on Mars differ sig- nificantly from those on Earth and similar features might well have different origins. A simple comparison of similarities only, will inevitably be misleading or incomplete.

The Mars Global Surveyor Ka-Band Link Experiment (MGS/KaBLE-II)

NASA Astrophysics Data System (ADS)

Morabito, D.; Butman, S.; Shambayati, S.

1999-01-01

The Mars Global Surveyor (MGS) spacecraft, launched on November 7, 1996, carries an experimental space-to-ground telecommunications link at Ka-band (32 GHz) along with the primary X-band (8.4-GHz) downlink. The signals are simultaneously transmitted from a 1.5-m-diameter parabolic antenna on MGS and received by a beam-waveguide (BWG) research and development (R&D) 34-meter a ntenna located in NASA's Goldstone Deep Space Network (DSN) complex near Barstow, California. This Ka-band link experiment (KaBLE-II) allows the performances of the Ka-band and X-band signals to be compared under nearly identical conditions. The two signals have been regularly tracked during the past 2 years. This article presents carrier-signal-level data (P_c/N_o) for both X-band and Ka-band acquired over a wide range of station elevation angles, weather conditions, and solar elongation angles. The cruise phase of the mission covered the period from launch (November 7, 1996) to Mars orbit capture (September 12, 1997). Since September 12, 1997, MGS has been in orbit around Mars. The measurements confirm that Ka-band could increase data capacity by at least a factor of three (5 dB) as compared with X-band. During May 1998, the solar corona experiment, in which the effects of solar plasma on the X-band and Ka-band links were studied, was conducted. In addition, frequency and difference frequency (f_x - f_(Ka)/3.8), ranging, and telemetry data results are presented. MGS/KaBLE-II measured signal strengths (for 54 percent of the experiments conducted) that were in reasonable agreement with predicted values based on preflight knowledge, and frequency residuals that agreed between bands and whose statistics were consistent with expected noise sources. For passes in which measured signal strengths disagreed with predicted values, the problems were traced to known deficiencies, for example, equipment operating under certain conditions, such as a cold Ka-band solid-state power amplifier (SSPA) temperature, and a degraded response at higher frequencies in certain modes. These efforts had continued with Deep Space 1 (DS1), launched in October 1998, which also emits Ka-band and X-band signals.

Multimodel Kalman filtering for adaptive nonuniformity correction in infrared sensors.

PubMed

Pezoa, Jorge E; Hayat, Majeed M; Torres, Sergio N; Rahman, Md Saifur

2006-06-01

We present an adaptive technique for the estimation of nonuniformity parameters of infrared focal-plane arrays that is robust with respect to changes and uncertainties in scene and sensor characteristics. The proposed algorithm is based on using a bank of Kalman filters in parallel. Each filter independently estimates state variables comprising the gain and the bias matrices of the sensor, according to its own dynamic-model parameters. The supervising component of the algorithm then generates the final estimates of the state variables by forming a weighted superposition of all the estimates rendered by each Kalman filter. The weights are computed and updated iteratively, according to the a posteriori-likelihood principle. The performance of the estimator and its ability to compensate for fixed-pattern noise is tested using both simulated and real data obtained from two cameras operating in the mid- and long-wave infrared regime.

Library-based illumination synthesis for critical CMOS patterning.

PubMed

Yu, Jue-Chin; Yu, Peichen; Chao, Hsueh-Yung

2013-07-01

In optical microlithography, the illumination source for critical complementary metal-oxide-semiconductor layers needs to be determined in the early stage of a technology node with very limited design information, leading to simple binary shapes. Recently, the availability of freeform sources permits us to increase pattern fidelity and relax mask complexities with minimal insertion risks to the current manufacturing flow. However, source optimization across many patterns is often treated as a design-of-experiments problem, which may not fully exploit the benefits of a freeform source. In this paper, a rigorous source-optimization algorithm is presented via linear superposition of optimal sources for pre-selected patterns. We show that analytical solutions are made possible by using Hopkins formulation and quadratic programming. The algorithm allows synthesized illumination to be linked with assorted pattern libraries, which has a direct impact on design rule studies for early planning and design automation for full wafer optimization.

Evaluation of the usefulness of a MOSFET detector in an anthropomorphic phantom for 6-MV photon beam.

PubMed

Kohno, Ryosuke; Hirano, Eriko; Kitou, Satoshi; Goka, Tomonori; Matsubara, Kana; Kameoka, Satoru; Matsuura, Taeko; Ariji, Takaki; Nishio, Teiji; Kawashima, Mitsuhiko; Ogino, Takashi

2010-07-01

In order to evaluate the usefulness of a metal oxide-silicon field-effect transistor (MOSFET) detector as a in vivo dosimeter, we performed in vivo dosimetry using the MOSFET detector with an anthropomorphic phantom. We used the RANDO phantom as an anthropomorphic phantom, and dose measurements were carried out in the abdominal, thoracic, and head and neck regions for simple square field sizes of 10 x 10, 5 x 5, and 3 x 3 cm(2) with a 6-MV photon beam. The dose measured by the MOSFET detector was verified by the dose calculations of the superposition (SP) algorithm in the XiO radiotherapy treatment-planning system. In most cases, the measured doses agreed with the results of the SP algorithm within +/-3%. Our results demonstrated the utility of the MOSFET detector for in vivo dosimetry even in the presence of clinical tissue inhomogeneities.

Using the mouse grimace scale to assess pain associated with routine ear notching and the effect of analgesia in laboratory mice.

PubMed

Miller, A L; Leach, M C

2015-04-01

Social housing is recommended where possible for laboratory mice. In order to achieve this, mice must be individually identifiable. Although, various methods are available, permanent identification is often required, such as ear notching. This method is likely to be painful and to date there is limited literature on pain assessment and alleviation for this routine husbandry practice. Here we aimed to determine if the mouse grimace scale (MGS) could be used to assess pain in C57BL/6 mice following routine ear notching. Langford et al. found that very acute noxious stimuli (i.e. < 10 min in duration) did not produce a change in MGS score in comparison to baseline. Here, no significant difference was found between MGS scores at baseline and immediately post ear notching, potentially indicating that the pain associated with ear notching is either too acute to assess using the MGS tool or the practice is not painful. Studies in other species indicate that ear notching is painful, therefore, unless we can confidently conclude that the process of ear notching is not painful, we should err on the side of caution and assume it is painful due to the large number of mice ear-notched and potential welfare consequences. Alternative methods of assessing pain following this routine practice should be used in order to assess both the potential pain in mice, and the effectiveness of analgesics or local anaesthetics to relieve any associated pain. © The Author(s) 2014 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

VIIRS S-NPP Nighttime DNB Spectral Response Function (SRF): The At-launch Characteristics and How the SRF Changes with Time Due to Tungsten Oxides Chromaticity

NASA Astrophysics Data System (ADS)

Guenther, B.; Lei, N.; Moeller, C.

2015-12-01

The VIIRS Day-Night Band (DNB) is designed with 3 gain stages: Low (LGS), Mid (MGS) and High (HGS) to span bright daytime to moonlit night earth scene signal levels. The published at-launch DNB relative spectral response (RSR) is based upon the LGS spectral measurements, since it was well measured in the pre-launch test program and the LGS can be calibrated by the on-board solar diffuser (MGS and HGS saturate on the SD). The LGS RSR however does not fully represent the spectral characteristics of nighttime DNB data from the MGS and HGS. Nighttime data users who apply the detailed DNB spectral characteristics in their analyses should use modulated RSR appropriate to the MGS and HGS observations. The RSR modulation is due to spectral darkening of the 4 mirrors of the S-NPP VIIRS telescope, which were contaminated with tungsten oxides in fabrication. These tungsten oxides are 'in family' with transition lenses on eyeglasses that darken when exposed to sunlight but do not recover when VIIRS goes into darkness because VIIRS in space is in a vacuum (transition lenses require atmospheric oxygen to recover). The on-going mirror darkening has caused a time-dependent shift in DNB RSR towards blue wavelengths. This presentation will provide access to the correct RSR to use for S-NPP DNB nighttime data over the mission time on-orbit. The changes in characteristics will be described in engineering terms to facilitate clear user understanding of how to handle RSR for nighttime observations over the mission lifetime.

THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures.

PubMed

Theobald, Douglas L; Wuttke, Deborah S

2006-09-01

THESEUS is a command line program for performing maximum likelihood (ML) superpositions and analysis of macromolecular structures. While conventional superpositioning methods use ordinary least-squares (LS) as the optimization criterion, ML superpositions provide substantially improved accuracy by down-weighting variable structural regions and by correcting for correlations among atoms. ML superpositioning is robust and insensitive to the specific atoms included in the analysis, and thus it does not require subjective pruning of selected variable atomic coordinates. Output includes both likelihood-based and frequentist statistics for accurate evaluation of the adequacy of a superposition and for reliable analysis of structural similarities and differences. THESEUS performs principal components analysis for analyzing the complex correlations found among atoms within a structural ensemble. ANSI C source code and selected binaries for various computing platforms are available under the GNU open source license from http://monkshood.colorado.edu/theseus/ or http://www.theseus3d.org.

Scrambled coherent superposition for enhanced optical fiber communication in the nonlinear transmission regime.

PubMed

Liu, Xiang; Chandrasekhar, S; Winzer, P J; Chraplyvy, A R; Tkach, R W; Zhu, B; Taunay, T F; Fishteyn, M; DiGiovanni, D J

2012-08-13

Coherent superposition of light waves has long been used in various fields of science, and recent advances in digital coherent detection and space-division multiplexing have enabled the coherent superposition of information-carrying optical signals to achieve better communication fidelity on amplified-spontaneous-noise limited communication links. However, fiber nonlinearity introduces highly correlated distortions on identical signals and diminishes the benefit of coherent superposition in nonlinear transmission regime. Here we experimentally demonstrate that through coordinated scrambling of signal constellations at the transmitter, together with appropriate unscrambling at the receiver, the full benefit of coherent superposition is retained in the nonlinear transmission regime of a space-diversity fiber link based on an innovatively engineered multi-core fiber. This scrambled coherent superposition may provide the flexibility of trading communication capacity for performance in future optical fiber networks, and may open new possibilities in high-performance and secure optical communications.

MGS Thermal Emission Spectrometer Image

NASA Image and Video Library

1997-09-24

This image shows the temperature of the martian surface measured by the Mars Global Surveyor Thermal Emission Spectrometer (TES) instrument. On September 15, 3 hours and 48 minutes after the spacecrafts third close approach to the planet, the TES instrument was commanded to point at Mars and measure the temperature of the surface during a four minute scan. At this time MGS was approximately 15,000 miles (~24,000 km) from the planet, with a view looking up from beneath the planet at the south polar region. The circular blue region (- 198 F) is the south polar cap of Mars that is composed of CO2 ice. The night side of the planet, shown with crosses, is generally cool (green). The sunlit side of the planet reaches temperatures near 15 F (yellow). Each square represents an individual observation acquired in 2 seconds with a ground resolution of ~125 miles (~200 km). The TES instrument will remain on and collect similar images every 100 minutes to monitor the temperature of the surface and atmosphere throughout the aerobraking phase of the MGS mission. http://photojournal.jpl.nasa.gov/catalog/PIA00937

Structural responses of metallic glasses under neutron irradiation.

PubMed

Yang, L; Li, H Y; Wang, P W; Wu, S Y; Guo, G Q; Liao, B; Guo, Q L; Fan, X Q; Huang, P; Lou, H B; Guo, F M; Zeng, Q S; Sun, T; Ren, Y; Chen, L Y

2017-12-01

Seeking nuclear materials that possess a high resistance to particle irradiation damage is a long-standing issue. Permanent defects, induced by irradiation, are primary structural changes, the accumulation of which will lead to structural damage and performance degradation in crystalline materials served in nuclear plants. In this work, structural responses of neutron irradiation in metallic glasses (MGs) have been investigated by making a series of experimental measurements, coupled with simulations in ZrCu amorphous alloys. It is found that, compared with crystalline alloys, MGs have some specific structural responses to neutron irradiation. Although neutron irradiation can induce transient vacancy-like defects in MGs, they are fully annihilated after structural relaxation by rearrangement of free volumes. In addition, the rearrangement of free volumes depends strongly on constituent elements. In particular, the change in free volumes occurs around the Zr atoms, rather than the Cu centers. This implies that there is a feasible strategy for identifying glassy materials with high structural stability against neutron irradiation by tailoring the microstructures, the systems, or the compositions in alloys. This work will shed light on the development of materials with high irradiation resistance.

A hidden variable in shear transformation zone volume versus Poisson's ratio relation in metallic glasses

NASA Astrophysics Data System (ADS)

Kim, S. Y.; Oh, H. S.; Park, E. S.

2017-10-01

Herein, we elucidate a hidden variable in a shear transformation zone (STZ) volume (Ω) versus Poisson's ratio (ν) relation and clarify the correlation between STZ characteristics and the plasticity of metallic glasses (MGs). On the basis of cooperative shear model and atomic stress theories, we carefully formulate Ω as a function of molar volume (Vm) and ν. The twofold trend in Ω and ν is attributed to a relatively large variation of Vm as compared to that of ν as well as an inverse relation between Vm and ν. Indeed, the derived equation reveals that the number of atoms in an STZ instead of Ω is a microstructural characteristic which has a close relationship with plasticity since it reflects the preference of atomistic behaviors between cooperative shearing and the generation of volume strain fluctuation under stress. The results would deepen our understanding of the correlation between microscopic behaviors (STZ activation) and macroscopic properties (plasticity) in MGs and enable a quantitative approach in associating various STZ-related macroscopic behaviors with intrinsic properties of MGs.

Quantifying multipartite nonlocality via the size of the resource

NASA Astrophysics Data System (ADS)

Curchod, Florian John; Gisin, Nicolas; Liang, Yeong-Cherng

2015-01-01

The generation of (Bell-)nonlocal correlations, i.e., correlations leading to the violation of a Bell-like inequality, requires the usage of a nonlocal resource, such as an entangled state. When given a correlation (a collection of conditional probability distributions) from an experiment or from a theory, it is desirable to determine the extent to which the participating parties would need to collaborate nonlocally for its (re)production. Here, we propose to achieve this via the minimal group size (MGS) of the resource, i.e., the smallest number of parties that need to share a given type of nonlocal resource for the above-mentioned purpose. In addition, we provide a general recipe—based on the lifting of Bell-like inequalities—to construct MGS witnesses for nonsignaling resources starting from any given ones. En route to illustrating the applicability of this recipe, we also show that when restricted to the space of full-correlation functions, nonsignaling resources are as powerful as unconstrained signaling resources. Explicit examples of correlations where their MGS can be determined using this recipe and other numerical techniques are provided.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Takeda, Atsuya; Department of Radiology, Tokyo Metropolitan Hiroo General Hospital, Tokyo; Sanuki, Naoko

Purpose: To retrospectively analyze the clinical outcomes of stereotactic body radiotherapy (SBRT) for patients with Stages 1A and 1B non-small-cell lung cancer. Methods and Materials: We reviewed the records of patients with non-small-cell lung cancer treated with curative intent between Dec 2001 and May 2007. All patients had histopathologically or cytologically confirmed disease, increased levels of tumor markers, and/or positive findings on fluorodeoxyglucose positron emission tomography. Staging studies identified their disease as Stage 1A or 1B. Performance status was 2 or less according to World Health Organization guidelines in all cases. The prescribed dose of 50 Gy total in fivemore » fractions, calculated by using a superposition algorithm, was defined for the periphery of the planning target volume. Results: One hundred twenty-one patients underwent SBRT during the study period, and 63 were eligible for this analysis. Thirty-eight patients had Stage 1A (T1N0M0) and 25 had Stage 1B (T2N0M0). Forty-nine patients were not appropriate candidates for surgery because of chronic pulmonary disease. Median follow-up of these 49 patients was 31 months (range, 10-72 months). The 3-year local control, disease-free, and overall survival rates in patients with Stages 1A and 1B were 93% and 96% (p = 0.86), 76% and 77% (p = 0.83), and 90% and 63% (p = 0.09), respectively. No acute toxicity was observed. Grade 2 or higher radiation pneumonitis was experienced by 3 patients, and 1 of them had fatal bacterial pneumonia. Conclusions: The SBRT at 50 Gy total in five fractions to the periphery of the planning target volume calculated by using a superposition algorithm is feasible. High local control rates were achieved for both T2 and T1 tumors.« less

Further development of image processing algorithms to improve detectability of defects in Sonic IR NDE

NASA Astrophysics Data System (ADS)

Obeidat, Omar; Yu, Qiuye; Han, Xiaoyan

2017-02-01

Sonic Infrared imaging (SIR) technology is a relatively new NDE technique that has received significant acceptance in the NDE community. SIR NDE is a super-fast, wide range NDE method. The technology uses short pulses of ultrasonic excitation together with infrared imaging to detect defects in the structures under inspection. Defects become visible to the IR camera when the temperature in the crack vicinity increases due to various heating mechanisms in the specimen. Defect detection is highly affected by noise levels as well as mode patterns in the image. Mode patterns result from the superposition of sonic waves interfering within the specimen during the application of sound pulse. Mode patterns can be a serious concern, especially in composite structures. Mode patterns can either mimic real defects in the specimen, or alternatively, hide defects if they overlap. In last year's QNDE, we have presented algorithms to improve defects detectability in severe noise. In this paper, we will present our development of algorithms on defect extraction targeting specifically to mode patterns in SIR images.

Comparison of modal superposition methods for the analytical solution to moving load problems.

DOT National Transportation Integrated Search

1994-01-01

The response of bridge structures to moving loads is investigated using modal superposition methods. Two distinct modal superposition methods are available: the modedisplacement method and the mode-acceleration method. While the mode-displacement met...

The origin of non-classical effects in a one-dimensional superposition of coherent states

NASA Technical Reports Server (NTRS)

Buzek, V.; Knight, P. L.; Barranco, A. Vidiella

1992-01-01

We investigate the nature of the quantum fluctuations in a light field created by the superposition of coherent fields. We give a physical explanation (in terms of Wigner functions and phase-space interference) why the 1-D superposition of coherent states in the direction of the x-quadrature leads to the squeezing of fluctuations in the y-direction, and show that such a superposition can generate the squeezed vacuum and squeezed coherent states.

Polar Polygon Patterns

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-338, 22 April 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image was taken during southern spring, as the seasonal carbon dioxide frost cap was subliming away. Frost remaining in shallow cracks and depressions reveals a fantastic polygonal pattern. Similar polygons occur in the Earth's arctic and antarctic regions-on Earth such polygons are related to the freeze and thaw of ground ice. The picture covers an area about 3 km (about 1.9 mi) wide near 71.9oS, 11.1oW. Sunlight illuminates the scene from the left.

Modular survivable satellite support

NASA Astrophysics Data System (ADS)

Wagner, R. E.

The development of a highly mobile, survivable satellite system from the Transportable Mobile Ground Station (T/MGS) is proposed. The addition of advanced capabilities to the T/MGS such as telemetry processing equipment, and the flexibility of a modularly designed system are examined. The need to increase survivability and mobility while reducing life cycle costs is discussed. A modular survivable satellite support system which consists of a 40-foot van, a diesel tractor, and a multimedia communications subsystem is described. The use of planar and phased arrays to improve transportability and new materials and structural designs to enhance hardness are discussed. Diagrams of the system are provided.

Hubble Watches the Red Planet as Mars Global Surveyor Begins Aerobraking

NASA Technical Reports Server (NTRS)

1997-01-01

[RIGHT] This NASA Hubble Space Telescope picture of Mars was taken on Sept. 12, one day after the arrival of the Mars Global Surveyor (MGS) spacecraft and only five hours before the beginning of autumn in the Martian northern hemisphere. (Mars is tilted on its axis like Earth, so it has similar seasonal changes, including an autumnal equinox when the Sun crosses Mars' equator from the northern to the southern hemisphere).

This Hubble picture was taken in support of the MGS mission. Hubble is monitoring the Martian weather conditions during the early phases of MGS aerobraking; in particular, the detection of large dust storms are important inputs into the atmospheric models used by the MGS mission to plan aerobraking operations.

Though a dusty haze fills the giant Hellas impact basin south of the dark fin-shaped feature Syrtis Major, the dust appears to be localized within Hellas. Unless the region covered expands significantly, the dust will not be of concern for MGS aerobraking.

Other early signs of seasonal transitions on Mars are apparent in the Hubble picture. The northern polar ice cap is blanketed under a polar hood of clouds that typically start forming in late northern summer. As fall progresses, sunlight will dwindle in the north polar region and the seasonal polar cap of frozen carbon dioxide will start condensing onto the surface under these clouds.

Hubble observations will continue until October 13, as MGS carefully uses the drag of the Martian atmosphere to circularize its orbit about the Red Planet. After mid-October, Mars will be too close to the Sun, in angular separation, for Hubble to safely view.

The image is a composite of three separately filtered colored images taken with the Wide Field Planetary Camera 2 (WFPC2). Resolution is 35 miles (57 kilometers) per pixel (picture element). The Pathfinder landing site near Ares Valles is about 2200 miles (3600 kilometers) west of the center of this image, so was not visible during this observation. Mars was 158 million miles (255 million kilometers) from Earth at the time.

[LEFT]

An image of this region of Mars, taken in June 1997, is shown for comparison. The Hellas basin is filled with bright clouds and/or surface frost. More water ice clouds are visible across the planet than in the Sept. image, reflecting the effects of the changing season. Mars appears larger because it was 44 million miles (77 million kilometers) closer to Earth than in the September image.

This image and other images and data received from the Hubble Space Telescope are posted on the World Wide Web on the Space Telescope Science Institute home page at URL http://oposite.stsci.edu/pubinfo/

Evaluation of Class II treatment by cephalometric regional superpositions versus conventional measurements.

PubMed

Efstratiadis, Stella; Baumrind, Sheldon; Shofer, Frances; Jacobsson-Hunt, Ulla; Laster, Larry; Ghafari, Joseph

2005-11-01

The aims of this study were (1) to evaluate cephalometric changes in subjects with Class II Division 1 malocclusion who were treated with headgear (HG) or Fränkel function regulator (FR) and (2) to compare findings from regional superpositions of cephalometric structures with those from conventional cephalometric measurements. Cephalographs were taken at baseline, after 1 year, and after 2 years of 65 children enrolled in a prospective randomized clinical trial. The spatial location of the landmarks derived from regional superpositions was evaluated in a coordinate system oriented on natural head position. The superpositions included the best anatomic fit of the anterior cranial base, maxillary base, and mandibular structures. Both the HG and the FR were effective in correcting the distoclusion, and they generated enhanced differential growth between the jaws. Differences between cranial and maxillary superpositions regarding mandibular displacement (Point B, pogonion, gnathion, menton) were noted: the HG had a more horizontal vector on maxillary superposition that was also greater (.0001 < P < .05) than the horizontal displacement observed with the FR. This discrepancy appeared to be related to (1) the clockwise (backward) rotation of the palatal and mandibular planes observed with the HG; the palatal plane's rotation, which was transferred through the occlusion to the mandibular plane, was factored out on maxillary superposition; and (2) the interaction between the inclination of the maxillary incisors and the forward movement of the mandible during growth. Findings from superpositions agreed with conventional angular and linear measurements regarding the basic conclusions for the primary effects of HG and FR. However, the results suggest that inferences of mandibular displacement are more reliable from maxillary than cranial superposition when evaluating occlusal changes during treatment.

Nonintegrable Schrodinger discrete breathers.

PubMed

Gómez-Gardeñes, J; Floría, L M; Peyrard, M; Bishop, A R

2004-12-01

In an extensive numerical investigation of nonintegrable translational motion of discrete breathers in nonlinear Schrödinger lattices, we have used a regularized Newton algorithm to continue these solutions from the limit of the integrable Ablowitz-Ladik lattice. These solutions are shown to be a superposition of a localized moving core and an excited extended state (background) to which the localized moving pulse is spatially asymptotic. The background is a linear combination of small amplitude nonlinear resonant plane waves and it plays an essential role in the energy balance governing the translational motion of the localized core. Perturbative collective variable theory predictions are critically analyzed in the light of the numerical results.

Martian Crustal Magnetism: What Have We Learned After Approximately 6 Years of MGS Observations?

NASA Technical Reports Server (NTRS)

Acuna, M. H.

2003-01-01

The MAG/ER investigation aboard the Mars Global Surveyor (MGS) has established conclusively that an internal, dynamo-generated field does not currently exist at Mars and discovered, unexpectedly, strong magnetization in the crust. An estimate of the upper limit of the current Mars dipole moment derived from the MGS data yields M < 2 x 10(exp 17) A-m2, which corresponds to a surface equatorial field strength of < 0.5 nT. The intense magnetization of the crust is closely associated with the ancient, heavily cratered high terrain, which lies south of Mars dichotomy boundary. The correlation of magnetization with the old terrain and the role of impacts, which have modified the magnetic properties of the crust, constitute a new and powerful diagnostic tool that is providing a unique view into the early thermal history of the planet, which was almost totally unknown prior to the arrival of MGS. Data from the Lunar Prospector mission complement contemporary analyses and interpretation of crustal magnetism in planetary system bodies that do not currently possess core dynamos. The observation of magnetic lineations over Terra Sirenum (Sirenum Fossae) and Terra Cimmeria, are suggestive of tectonic processes observed at Earth in association with sea-floor spreading and geomagnetic field reversals. If this association is correct, it would indicate the possible existence of plate tectonics and magnetic field reversals in Mars' early history. Alternative models involving fault/graben formation associated with the fracturing of a thin, magnetized crustal layer by tectonic or volcanism-induced stresses, yield equally valid interpretations. To date, no reliable correlation between topography, geology and crustal magnetism has been established and the origin of these remarkable Martian magnetic anomalies remains a mystery.

Structure and Dynamics of the Polar Regions of Mars from MGS Topography and Gravity

NASA Technical Reports Server (NTRS)

Zuber, Maria T.; Smith, David E.; Neumann, Gregory A.; Lemoine, Frank G.

2000-01-01

The Mars Global Surveyor (MGS) spacecraft has been engaged in systematic mapping of Mars since insertion into Mars orbit in September, 1997. The objectives of the MGS mission are to globally map Mars as well as to quantify seasonal changes on the planet. MGS geophysical/geodetic observations of topography from the Mars Orbiter Laser Altimeter (MOLA) and gravity from the Radio Science investigation are providing significant new insights on both static and time-varying aspects of the polar regions of Mars. These observations have implications for polar processes on diurnal seasonal and climatic timescales. Thus far, MOLA has collected over 300 million precise measurements of Martian topography and cloud heights. The instrument has also provided measurements of the width of the backscattered optical pulse and of the 1064 nm reflectivity of the Martian surface and atmosphere. The along-track resolution of MOLA ground shots is approx. 300 m and the across-track spacing in the polar regions is a maximum of about four kilometers. The vertical accuracy of the topography is determined by the precision recovery of spacecraft orbits from the Radio Science investigation, which includes MOLA altimetry in the form of crossovers. This accuracy is currently approx. one meter. The gravity field is derived from X-band Doppler tracking with typical accuracy of 0.03 to 0.05 mm/s averaged over ten seconds. Current Mars gravity fields are to approximately degree and order 80 but are interpretable to the approximate degree and order 60 (spatial resolution < 180 km), which represents an estimate of the approximate coefficient limit of a field that can be produced without a power law constraint on the gravitational field inversion, which is commonly imposed for solution stability. Additional information is contained in the original extended abstract.

Roles of TRPV1 and TRPA1 in Spontaneous Pain from Inflamed Masseter Muscle.

PubMed

Wang, Sheng; Brigoli, Benjamin; Lim, Jongseuk; Karley, Alisha; Chung, Man-Kyo

2018-06-08

Craniofacial muscle pain, such as spontaneous pain and bite-evoked pain, are major symptoms in patients with temporomandibular disorders and infection. However, the underlying mechanisms of muscle pain, especially mechanisms of highly prevalent spontaneous pain, are poorly understood. Recently, we reported that transient receptor potential vanilloid 1 (TRPV1) contributes to spontaneous pain but only marginally contributes to bite-evoked pain during masseter inflammation. Here, we investigated the role of transient receptor potential ankyrin 1 (TRPA1) in spontaneous and bite-evoked pain during masseter inflammation, and dissected the relative contributions of TRPA1 and TRPV1. Masseter inflammation increased mouse grimace scale (MGS) scores and face wiping behaviors. Pharmacological or genetic inhibition of TRPA1 significantly attenuated MGS but not face wiping behaviors. MGS scores were also attenuated by scavenging putative endogenous ligands for TRPV1 or TRPA1. Simultaneous inhibition of TRPA1 by AP18 and TRPV1 by AMG9810 in masseter muscle resulted in robust inhibition of both MGS and face wiping behaviors. Administration of AP18 or AMG9810 to masseter muscle induced conditioned place preference (CPP). The extent of CPP following simultaneous administration of AP18 and AMG9810 was greater than that induced by the individual antagonists. In contrast, inflammation-induced reduction of bite force was not affected by the inhibition of TRPA1 alone or in combination with TRPV1. These results suggest that simultaneous inhibition of TRPV1 and TRPA1 produces additive relief of spontaneous pain, but does not ameliorate bite-evoked pain during masseter inflammation. Our results provide further evidence that distinct mechanisms underlie spontaneous and bite-evoked pain from inflamed masseter muscle. Copyright © 2018. Published by Elsevier Ltd.

Tools Ensure Reliability of Critical Software

NASA Technical Reports Server (NTRS)

2012-01-01

In November 2006, after attempting to make a routine maneuver, NASA's Mars Global Surveyor (MGS) reported unexpected errors. The onboard software switched to backup resources, and a 2-day lapse in communication took place between the spacecraft and Earth. When a signal was finally received, it indicated that MGS had entered safe mode, a state of restricted activity in which the computer awaits instructions from Earth. After more than 9 years of successful operation gathering data and snapping pictures of Mars to characterize the planet's land and weather communication between MGS and Earth suddenly stopped. Months later, a report from NASA's internal review board found the spacecraft's battery failed due to an unfortunate sequence of events. Updates to the spacecraft's software, which had taken place months earlier, were written to the wrong memory address in the spacecraft's computer. In short, the mission ended because of a software defect. Over the last decade, spacecraft have become increasingly reliant on software to carry out mission operations. In fact, the next mission to Mars, the Mars Science Laboratory, will rely on more software than all earlier missions to Mars combined. According to Gerard Holzmann, manager at the Laboratory for Reliable Software (LaRS) at NASA's Jet Propulsion Laboratory (JPL), even the fault protection systems on a spacecraft are mostly software-based. For reasons like these, well-functioning software is critical for NASA. In the same year as the failure of MGS, Holzmann presented a new approach to critical software development to help reduce risk and provide consistency. He proposed The Power of 10: Rules for Developing Safety-Critical Code, which is a small set of rules that can easily be remembered, clearly relate to risk, and allow compliance to be verified. The reaction at JPL was positive, and developers in the private sector embraced Holzmann's ideas.

Electrical stimulation during skill training with a therapeutic glove enhances the induction of cortical plasticity and has a positive effect on motor memory.

PubMed

Christova, Monica; Rafolt, Dietmar; Golaszewski, Stefan; Nardone, Raffaele; Gallasch, Eugen

2014-08-15

To examine whether afferent stimulation of hand muscles has a facilitating effect on motor performance, learning and cortical excitability, healthy subjects were trained on the grooved pegboard test (GTP) while wearing a mesh glove (MG) with incorporated electrical stimulation. Three study groups (n=12) were compared in a between subjects design, the bare handed (BH), gloved (MG) and gloved with electrical stimulation (MGS) groups. Motor performance was assessed by the GPT completion time across 4 training blocks, and further one block was retested 7 days later to determine the off-line effects. On-line learning was obtained by normalizing the completion time values to the first training block, and off-line learning was obtained by normalizing the retest values to the last training block. Cortical excitability was assessed via single and paired-pulse transcranial magnetic stimulation (TMS) at pre-training, post-training and 30 min post-training. Motor evoked potential recruitment curve, short-latency intracortical inhibition and intracortical facilitation were estimated from the TMS assessments. Motor performance across all 4 training blocks was poor in the MG and MGS groups, while on-line learning was not affected by wearing the glove or by afferent stimulation. However, off-line learning, tested 7 days after training, was improved in the MGS group compared to the MG group. In addition, post-training corticospinal excitability was increased in the MGS group. It can be concluded that afferent stimulation improves off-line learning and thus has a positive effect on motor memory, likely due to LTP-like cortical plasticity in the consolidation phase. Copyright © 2014 Elsevier B.V. All rights reserved.

Defective replication initiation results in locus specific chromosome breakage and a ribosomal RNA deficiency in yeast

PubMed Central

Sanchez, Joseph C.; Kwan, Elizabeth X.; Raghuraman, M. K.; Brewer, Bonita J.

2017-01-01

A form of dwarfism known as Meier-Gorlin syndrome (MGS) is caused by recessive mutations in one of six different genes (ORC1, ORC4, ORC6, CDC6, CDT1, and MCM5). These genes encode components of the pre-replication complex, which assembles at origins of replication prior to S phase. Also, variants in two additional replication initiation genes have joined the list of causative mutations for MGS (Geminin and CDC45). The identity of the causative MGS genetic variants strongly suggests that some aspect of replication is amiss in MGS patients; however, little evidence has been obtained regarding what aspect of chromosome replication is faulty. Since the site of one of the missense mutations in the human ORC4 alleles is conserved between humans and yeast, we sought to determine in what way this single amino acid change affects the process of chromosome replication, by introducing the comparable mutation into yeast (orc4Y232C). We find that yeast cells with the orc4Y232C allele have a prolonged S-phase, due to compromised replication initiation at the ribosomal DNA (rDNA) locus located on chromosome XII. The inability to initiate replication at the rDNA locus results in chromosome breakage and a severely reduced rDNA copy number in the survivors, presumably helping to ensure complete replication of chromosome XII. Although reducing rDNA copy number may help ensure complete chromosome replication, orc4Y232C cells struggle to meet the high demand for ribosomal RNA synthesis. This finding provides additional evidence linking two essential cellular pathways—DNA replication and ribosome biogenesis. PMID:29036220

Defective replication initiation results in locus specific chromosome breakage and a ribosomal RNA deficiency in yeast.

PubMed

Sanchez, Joseph C; Kwan, Elizabeth X; Pohl, Thomas J; Amemiya, Haley M; Raghuraman, M K; Brewer, Bonita J

2017-10-01

A form of dwarfism known as Meier-Gorlin syndrome (MGS) is caused by recessive mutations in one of six different genes (ORC1, ORC4, ORC6, CDC6, CDT1, and MCM5). These genes encode components of the pre-replication complex, which assembles at origins of replication prior to S phase. Also, variants in two additional replication initiation genes have joined the list of causative mutations for MGS (Geminin and CDC45). The identity of the causative MGS genetic variants strongly suggests that some aspect of replication is amiss in MGS patients; however, little evidence has been obtained regarding what aspect of chromosome replication is faulty. Since the site of one of the missense mutations in the human ORC4 alleles is conserved between humans and yeast, we sought to determine in what way this single amino acid change affects the process of chromosome replication, by introducing the comparable mutation into yeast (orc4Y232C). We find that yeast cells with the orc4Y232C allele have a prolonged S-phase, due to compromised replication initiation at the ribosomal DNA (rDNA) locus located on chromosome XII. The inability to initiate replication at the rDNA locus results in chromosome breakage and a severely reduced rDNA copy number in the survivors, presumably helping to ensure complete replication of chromosome XII. Although reducing rDNA copy number may help ensure complete chromosome replication, orc4Y232C cells struggle to meet the high demand for ribosomal RNA synthesis. This finding provides additional evidence linking two essential cellular pathways-DNA replication and ribosome biogenesis.

The Gravity Field of Mars From MGS, Mars Odyssey, and MRO Radio Science

NASA Technical Reports Server (NTRS)

Genova, Antonio; Goossens, Sander; Lemoine, Frank G.; Mazarico, Erwan; Smith, David E.; Zuber, Maria T.

2015-01-01

The Mars Global Surveyor (MGS), Mars Odyssey (ODY), and Mars Reconnaissance Orbiter (MRO) missions have enabled NASA to conduct reconnaissance and exploration of Mars from orbit for sixteen consecutive years. These radio systems on these spacecraft enabled radio science in orbit around Mars to improve the knowledge of the static structure of the Martian gravitational field. The continuity of the radio tracking data, which cover more than a solar cycle, also provides useful information to characterize the temporal variability of the gravity field, relevant to the planet's internal dynamics and the structure and dynamics of the atmosphere [1]. MGS operated for more than 7 years, between 1999 and 2006, in a frozen sun-synchronous, near-circular, polar orbit with the periapsis at approximately 370 km altitude. ODY and MRO have been orbiting Mars in two separate sun-synchronous orbits at different local times and altitudes. ODY began its mapping phase in 2002 with the periapis at approximately 390 km altitude and 4-5pm Local Solar Time (LST), whereas the MRO science mission started in November 2006 with the periapis at approximately 255 km altitude and 3pm LST. The 16 years of radio tracking data provide useful information on the atmospheric density in the Martian upper atmosphere. We used ODY and MRO radio data to recover the long-term periodicity of the major atmospheric constituents -- CO2, O, and He -- at the orbit altitudes of these two spacecraft [2]. The improved atmospheric model provides a better prediction of the annual and semi-annual variability of the dominant species. Therefore, the inclusion of the recovered model leads to improved orbit determination and an improved gravity field model of Mars with MGS, ODY, and MRO radio tracking data.

Investigation on the Accuracy of Superposition Predictions of Film Cooling Effectiveness

NASA Astrophysics Data System (ADS)

Meng, Tong; Zhu, Hui-ren; Liu, Cun-liang; Wei, Jian-sheng

2018-05-01

Film cooling effectiveness on flat plates with double rows of holes has been studied experimentally and numerically in this paper. This configuration is widely used to simulate the multi-row film cooling on turbine vane. Film cooling effectiveness of double rows of holes and each single row was used to study the accuracy of superposition predictions. Method of stable infrared measurement technique was used to measure the surface temperature on the flat plate. This paper analyzed the factors that affect the film cooling effectiveness including hole shape, hole arrangement, row-to-row spacing and blowing ratio. Numerical simulations were performed to analyze the flow structure and film cooling mechanisms between each film cooling row. Results show that the blowing ratio within the range of 0.5 to 2 has a significant influence on the accuracy of superposition predictions. At low blowing ratios, results obtained by superposition method agree well with the experimental data. While at high blowing ratios, the accuracy of superposition prediction decreases. Another significant factor is hole arrangement. Results obtained by superposition prediction are nearly the same as experimental values of staggered arrangement structures. For in-line configurations, the superposition values of film cooling effectiveness are much higher than experimental data. For different hole shapes, the accuracy of superposition predictions on converging-expanding holes is better than cylinder holes and compound angle holes. For two different hole spacing structures in this paper, predictions show good agreement with the experiment results.

Quantum superposition at the half-metre scale.

PubMed

Kovachy, T; Asenbaum, P; Overstreet, C; Donnelly, C A; Dickerson, S M; Sugarbaker, A; Hogan, J M; Kasevich, M A

2015-12-24

The quantum superposition principle allows massive particles to be delocalized over distant positions. Though quantum mechanics has proved adept at describing the microscopic world, quantum superposition runs counter to intuitive conceptions of reality and locality when extended to the macroscopic scale, as exemplified by the thought experiment of Schrödinger's cat. Matter-wave interferometers, which split and recombine wave packets in order to observe interference, provide a way to probe the superposition principle on macroscopic scales and explore the transition to classical physics. In such experiments, large wave-packet separation is impeded by the need for long interaction times and large momentum beam splitters, which cause susceptibility to dephasing and decoherence. Here we use light-pulse atom interferometry to realize quantum interference with wave packets separated by up to 54 centimetres on a timescale of 1 second. These results push quantum superposition into a new macroscopic regime, demonstrating that quantum superposition remains possible at the distances and timescales of everyday life. The sub-nanokelvin temperatures of the atoms and a compensation of transverse optical forces enable a large separation while maintaining an interference contrast of 28 per cent. In addition to testing the superposition principle in a new regime, large quantum superposition states are vital to exploring gravity with atom interferometers in greater detail. We anticipate that these states could be used to increase sensitivity in tests of the equivalence principle, measure the gravitational Aharonov-Bohm effect, and eventually detect gravitational waves and phase shifts associated with general relativity.

A New Algorithm with Plane Waves and Wavelets for Random Velocity Fields with Many Spatial Scales

NASA Astrophysics Data System (ADS)

Elliott, Frank W.; Majda, Andrew J.

1995-03-01

A new Monte Carlo algorithm for constructing and sampling stationary isotropic Gaussian random fields with power-law energy spectrum, infrared divergence, and fractal self-similar scaling is developed here. The theoretical basis for this algorithm involves the fact that such a random field is well approximated by a superposition of random one-dimensional plane waves involving a fixed finite number of directions. In general each one-dimensional plane wave is the sum of a random shear layer and a random acoustical wave. These one-dimensional random plane waves are then simulated by a wavelet Monte Carlo method for a single space variable developed recently by the authors. The computational results reported in this paper demonstrate remarkable low variance and economical representation of such Gaussian random fields through this new algorithm. In particular, the velocity structure function for an imcorepressible isotropic Gaussian random field in two space dimensions with the Kolmogoroff spectrum can be simulated accurately over 12 decades with only 100 realizations of the algorithm with the scaling exponent accurate to 1.1% and the constant prefactor accurate to 6%; in fact, the exponent of the velocity structure function can be computed over 12 decades within 3.3% with only 10 realizations. Furthermore, only 46,592 active computational elements are utilized in each realization to achieve these results for 12 decades of scaling behavior.

SU-F-T-377: Monte Carlo Re-Evaluation of Volumetric-Modulated Arc Plans of Advanced Stage Nasopharygeal Cancers Optimized with Convolution-Superposition Algorithm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee, K; Leung, R; Law, G

Background: Commercial treatment planning system Pinnacle3 (Philips, Fitchburg, WI, USA) employs a convolution-superposition algorithm for volumetric-modulated arc radiotherapy (VMAT) optimization and dose calculation. Study of Monte Carlo (MC) dose recalculation of VMAT plans for advanced-stage nasopharyngeal cancers (NPC) is currently limited. Methods: Twenty-nine VMAT prescribed 70Gy, 60Gy, and 54Gy to the planning target volumes (PTVs) were included. These clinical plans achieved with a CS dose engine on Pinnacle3 v9.0 were recalculated by the Monaco TPS v5.0 (Elekta, Maryland Heights, MO, USA) with a XVMC-based MC dose engine. The MC virtual source model was built using the same measurement beam datasetmore » as for the Pinnacle beam model. All MC recalculation were based on absorbed dose to medium in medium (Dm,m). Differences in dose constraint parameters per our institution protocol (Supplementary Table 1) were analyzed. Results: Only differences in maximum dose to left brachial plexus, left temporal lobe and PTV54Gy were found to be statistically insignificant (p> 0.05). Dosimetric differences of other tumor targets and normal organs are found in supplementary Table 1. Generally, doses outside the PTV in the normal organs are lower with MC than with CS. This is also true in the PTV54-70Gy doses but higher dose in the nasal cavity near the bone interfaces is consistently predicted by MC, possibly due to the increased backscattering of short-range scattered photons and the secondary electrons that is not properly modeled by the CS. The straight shoulders of the PTV dose volume histograms (DVH) initially resulted from the CS optimization are merely preserved after MC recalculation. Conclusion: Significant dosimetric differences in VMAT NPC plans were observed between CS and MC calculations. Adjustments of the planning dose constraints to incorporate the physics differences from conventional CS algorithm should be made when VMAT optimization is carried out directly with MC dose engine.« less

Thermalization as an invisibility cloak for fragile quantum superpositions

NASA Astrophysics Data System (ADS)

Hahn, Walter; Fine, Boris V.

2017-07-01

We propose a method for protecting fragile quantum superpositions in many-particle systems from dephasing by external classical noise. We call superpositions "fragile" if dephasing occurs particularly fast, because the noise couples very differently to the superposed states. The method consists of letting a quantum superposition evolve under the internal thermalization dynamics of the system, followed by a time-reversal manipulation known as Loschmidt echo. The thermalization dynamics makes the superposed states almost indistinguishable during most of the above procedure. We validate the method by applying it to a cluster of spins ½.

Design and simulation of a superposition compound eye system based on hybrid diffractive-refractive lenses.

PubMed

Zhang, Shuqing; Zhou, Luyang; Xue, Changxi; Wang, Lei

2017-09-10

Compound eyes offer a promising field of miniaturized imaging systems. In one application of a compound eye, superposition of compound eye systems forms a composite image by superposing the images produced by different channels. The geometric configuration of superposition compound eye systems is achieved by three micro-lens arrays with different pitches and focal lengths. High resolution is indispensable for the practicability of superposition compound eye systems. In this paper, hybrid diffractive-refractive lenses are introduced into the design of a compound eye system for this purpose. With the help of ZEMAX, two superposition compound eye systems with and without hybrid diffractive-refractive lenses were separately designed. Then, we demonstrate the effectiveness of using a hybrid diffractive-refractive lens to improve the image quality.

Crater in Marte Vallis

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-566, 6 December 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a streamlined tail-pointing toward the upper right (northeast)--in the lee of a meteor impact crater in Marte Vallis, a large valley and channel complex southeast and east of the Elysium volcanic region. The fluid that went through Marte Vallis, whether water, mud, lava, or otherwise, created this form as it moved from the lower left (southwest) toward the upper right. The crater is located near 19.0oN, 174.9oW. The image covers an area 3 km (1.9 mi) wide and is illuminated from the left.

Polygons on Crater Floor

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-357, 11 May 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) picture shows a pattern of polygons on the floor of a northern plains impact crater. These landforms are common on crater floors at high latitudes on Mars. Similar polygons occur in the arctic and antarctic regions of Earth, where they indicate the presence and freeze-thaw cycling of ground ice. Whether the polygons on Mars also indicate water ice in the ground is uncertain. The image is located in a crater at 64.8oN, 292.7oW. Sunlight illuminates the scene from the lower left.

Interannual Variability of Dust and Ice in the Mars Atmosphere: Comparison of MRO Mars Climate Sounder Retrievals with MGS-TES Limb Sounding Retrievals

NASA Technical Reports Server (NTRS)

Shirley, J. H.; McConnochie, T. H.; Kleinbohl, A.; Schofield, J. T.; Kass, D.; Heavens, N. G.; Benson, J.; McCleese, D. J.

2011-01-01

Dust and ice play important roles in Martian atmospheric dynamics on all time scales. Dust loading in particular exerts an important control on atmospheric temperatures and thereby on the strength of the atmospheric circulation in any given year. We present the first comparisons of MGS-TES aerosol opacity profiles with MRO-MCS aerosol opacity profiles. While the differences in vertical resolution are significant (a factor of 2), we find good agreement at particular seasons between nightside zonal average dust opacity profiles from the two instruments. Derived water ice opacities are likewise similar but show greater variability.

South Polar Ice Cap

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-337, 21 April 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows the 'swiss cheese' pattern of frozen carbon dioxide on the south polar residual cap. Observation of these materials over two Mars years has revealed that the scarps that bound the mesas and small buttes are retreating-the carbon dioxide ice is subliming away-at a rate of about 3 meters (3 yards) per Mars year in some places. The picture covers an area about 900 m (about 900 yards) wide near 87.1oS, 93.7oW. Sunlight illuminates the scene from the upper left.

South Polar Layers

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-516, 17 October 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows eroded, stair-stepped layers in the south polar region of Mars. These layers have been considered, for the past three decades, to consist of a mixture of dust and ice. The Mars Polar Lander (MPL) mission was designed to test this hypothesis. However, sadly, MPL was lost during descent in December 1999. This exposure of south polar layered material is located near 86.3oS, 187.7oW. The image covers an area 3 km (1.9 mi) wide and is illuminated by sunlight from the upper left.

Extraction of solubles from plant biomass for use as microbial growth stimulant and methods related thereto

DOEpatents

Lau, Ming Woei

2015-12-08

A method for producing a microbial growth stimulant (MGS) from a plant biomass is described. In one embodiment, an ammonium hydroxide solution is used to extract a solution of proteins and ammonia from the biomass. Some of the proteins and ammonia are separated from the extracted solution to provide the MGS solution. The removed ammonia can be recycled and the proteins are useful as animal feeds. In one embodiment, the method comprises extracting solubles from pretreated lignocellulosic biomass with a cellulase enzyme-producing growth medium (such T. reesei) in the presence of water and an aqueous extract.

Frost in Charitum Montes

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-387, 10 June 2003

This is a Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) wide angle view of the Charitum Montes, south of Argyre Planitia, in early June 2003. The seasonal south polar frost cap, composed of carbon dioxide, has been retreating southward through this area since spring began a month ago. The bright features toward the bottom of this picture are surfaces covered by frost. The picture is located near 57oS, 43oW. North is at the top, south is at the bottom. Sunlight illuminates the scene from the upper left. The area shown is about 217 km (135 miles) wide.

An Investigation of the Correlation of Water-Ice and Dust Retrievals Via the MGS TES Data Set

NASA Technical Reports Server (NTRS)

Qu, Z.; Tamppari, L. K.; Smith, M. D.; Bass, Deborah; Hale, A. S.

2004-01-01

Water-ice in the Martian atmosphere was first identified in the Mariner 9 Infrared Interferometer Spectrometer (IRIS) spectra. The Viking Imaging Subsystem (VIS) instruments aboard the Viking orbiter also observed water-ice clouds and hazes in the Martian atmosphere. The MGS TES instrument is an infrared inferometer/spectrometer which covers the spectral range 6-50 micron with a selectable sampling resolution of either 5 or 10 per cm. Using the relatively independent and distinct spectral signatures for dust and water-ice, these two retrieved quantities have been retrieved simultaneously. Although the interrelations among the two quantities have been analyzed by Smith et al. and the retrievals are thought to be robust, understanding the impact of each quantity on the other during their retrievals as well as the impact from the surface for retrievals is important for correctly interpreting the science, and therefore requires close examination. An understanding of the correlation or a-correlation between dust and water-ice would aid in understanding the physical processes responsible for the transport of aerosols in the Martian atmosphere. In this presentation, we present an investigation of the correlation between water-ice and dust in the MGS TES data set.

A Search for Unconfined Fluvial Outflow Deposits on Mars

NASA Technical Reports Server (NTRS)

Zimbelman, J. R.; Bourke, M. C.

2000-01-01

Fluvial processes have been active during a large portion of Martian history, as evidenced by a variety of erosional features, ranging from concentrations of small channels to scour features generated by floods that affected enormous areas on Mars. Most research efforts prior to Mars Global Surveyor (MGS) focused on channelized reaches since these were some of the most convincing fluvial features on the planet. Since MGS reached its planned mapping orbit in 1999, a new era of Mars exploration has been opened. The m-scale resolution of the Mars Orbiter Camera (MOC), the precise elevation measurements of the Mars Orbiter Laser Altimeter (MOLA), and the compositional constraints derived from the Thermal Emission Spectrometer (TES) allows one now to search for deposits as well as erosional landforms. Here we describe our initial efforts at a search for deposits on Mars where flow was no longer confined within a topographic channel. We are using both new MGS and existing Viking data, in conjunction with field results of fluvial deposits in unconfined reaches from central Australia and elsewhere as analogues for the deposit characteristics to search for on Mars. Additional information is contained in the original extended abstract.

Local microstructure evolution at shear bands in metallic glasses with nanoscale phase separation

PubMed Central

He, Jie; Kaban, Ivan; Mattern, Norbert; Song, Kaikai; Sun, Baoan; Zhao, Jiuzhou; Kim, Do Hyang; Eckert, Jürgen; Greer, A. Lindsay

2016-01-01

At room temperature, plastic flow of metallic glasses (MGs) is sharply localized in shear bands, which are a key feature of the plastic deformation in MGs. Despite their clear importance and decades of study, the conditions for formation of shear bands, their structural evolution and multiplication mechanism are still under debate. In this work, we investigate the local conditions at shear bands in new phase-separated bulk MGs containing glassy nanospheres and exhibiting exceptional plasticity under compression. It is found that the glassy nanospheres within the shear band dissolve through mechanical mixing driven by the sharp strain localization there, while those nearby in the matrix coarsen by Ostwald ripening due to the increased atomic mobility. The experimental evidence demonstrates that there exists an affected zone around the shear band. This zone may arise from low-strain plastic deformation in the matrix between the bands. These results suggest that measured property changes originate not only from the shear bands themselves, but also from the affected zones in the adjacent matrix. This work sheds light on direct visualization of deformation-related effects, in particular increased atomic mobility, in the region around shear bands. PMID:27181922

Suppression of abnormal morphology and extracytoplasmic function sigma activity in Bacillus subtilis ugtP mutant cells by expression of heterologous glucolipid synthases from Acholeplasma laidlawii.

PubMed

Matsuoka, Satoshi; Seki, Takahiro; Matsumoto, Kouji; Hara, Hiroshi

2016-12-01

Glucolipids in Bacillus subtilis are synthesized by UgtP processively transferring glucose from UDP-glucose to diacylglycerol. Here we conclude that the abnormal morphology of a ugtP mutant is caused by lack of glucolipids, since the same morphology arises after abolition of glucolipid production by disruption of pgcA and gtaB, which are involved in UDP-glucose synthesis. Conversely, expression of a monoglucosyldiacylglycerol (MGlcDG) produced by 1,2-diacylglycerol 3-glucosyltransferase from Acholeplasma laidlawii (alMGS) almost completely suppressed the ugtP disruptant phenotype. Activation of extracytoplasmic function (ECF) sigmas (SigM, SigV, and SigX) in the ugtP mutant was decreased by alMGS expression, and was suppressed to low levels by MgSO 4 addition. When alMGS and alDGS (A. laidlawii 1,2-diacylglycerol-3-glucose (1-2)-glucosyltransferase producing diglucosyldiacylglycerol (DGlcDG)) were simultaneously expressed, SigX activation was repressed to wild type level. These observations suggest that MGlcDG molecules are required for maintenance of B. subtilis cell shape and regulation of ECF sigmas, and DGlcDG regulates SigX activity.

Thermophysical properties of the MER and Beagle II landing site regions on Mars

NASA Astrophysics Data System (ADS)

Jakosky, Bruce M.; Hynek, Brian M.; Pelkey, Shannon M.; Mellon, Michael T.; Martínez-Alonso, Sara; Putzig, Nathaniel E.; Murphy, Nate; Christensen, Philip R.

2006-08-01

We analyzed remote-sensing observations of the Isidis Basin, Gusev Crater, and Meridiani Planum landing sites for Beagle II, MER-A Spirit, and MER-B Opportunity spacecraft, respectively. We emphasized the thermophysical properties using daytime and nighttime radiance measurements from the Mars Global Surveyor (MGS) Thermal Emission Spectrometer and Mars Odyssey Thermal Emission Imaging System (THEMIS) and thermal inertias derived from nighttime data sets. THEMIS visible images, MGS Mars Orbiter Camera (MOC) narrow-angle images, and MGS Mars Orbiter Laser Altimeter (MOLA) data are incorporated as well. Additionally, the remote-sensing data were compared with ground-truth at the MER sites. The Isidis Basin surface layer has been shaped by aeolian processes and erosion by slope winds coming off of the southern highlands and funneling through notches between massifs. In the Gusev region, surface materials of contrasting thermophysical properties have been interpreted as rocks or bedrock, duricrust, and dust deposits; these are consistent with a complex geological history dominated by volcanic and aeolian processes. At Meridiani Planum the many layers having different thermophysical and erosional properties suggest periodic deposition of differing sedimentological facies possibly related to clast size, grain orientation and packing, or mineralogy.

The Critical Criterion on Runaway Shear Banding in Metallic Glasses

PubMed Central

Sun, B. A.; Yang, Y.; Wang, W. H.; Liu, C. T.

2016-01-01

The plastic flow of metallic glasses (MGs) in bulk is mediated by nanoscale shear bands, which is known to proceed in a stick-slip manner until reaching a transition state causing catastrophic failures. Such a slip-to-failure transition controls the plasticity of MGs and resembles many important phenomena in natural science and engineering, such as friction, lubrication and earthquake, therefore has attracted tremendous research interest over past decades. However, despite the fundamental and practical importance, the physical origin of this slip-to-failure transition is still poorly understood. By tracking the behavior of a single shear band, here we discover that the final fracture of various MGs during compression is triggered as the velocity of the dominant shear band rises to a critical value, the magnitude of which is independent of alloy composition, sample size, strain rate and testing frame stiffness. The critical shear band velocity is rationalized with the continuum theory of liquid instability, physically originating from a shear-induced cavitation process inside the shear band. Our current finding sheds a quantitative insight into deformation and fracture in disordered solids and, more importantly, is useful to the design of plastic/tough MG-based materials and structures. PMID:26893196

The Minnesota Grading System of eye bank eyes for age-related macular degeneration.

PubMed

Olsen, Timothy W; Feng, Xiao

2004-12-01

The Minnesota Grading System (MGS) is a method to evaluate human eye bank eyes and determine the level of age-related macular degeneration (AMD), by using criteria and definitions from the Age-Related Eye Disease Study (AREDS). Donor eyes (108 pairs) from the Minnesota Lions Eye Bank were cut circumferentially at the pars plana to remove the anterior segment. A 1000 +/- 2.5-microm ruby sphere was placed on the optic nerve as a size reference. A digital, high-resolution, color macular photograph was taken through a dissecting microscope. The neurosensory retina was removed from one globe of the pair. The underlying retinal pigment epithelium was rephotographed, localizing the fovea with a proportional triangle. A grid was superimposed in the macular photographs and images were graded according to AREDS criteria. Twenty pairs were dissected bilaterally and graded for symmetry. Eighty-eight globes were graded into one of four MGS categories. Nineteen (95%) of 20 globes had symmetric grades. The MGS provides a methodology to grade donor tissue from eye bank eyes to correspond to the AREDS classification system. Donor tissue may be used for subsequent molecular analysis, including genomics and proteomics.

A magnetically responsive nanocomposite scaffold combined with Schwann cells promotes sciatic nerve regeneration upon exposure to magnetic field

PubMed Central

Huang, Liangliang; Sun, Zhen; Zeng, Wen; Huang, Jinghui; Luo, Zhuojing

2017-01-01

Peripheral nerve repair is still challenging for surgeons. Autologous nerve transplantation is the acknowledged therapy; however, its application is limited by the scarcity of available donor nerves, donor area morbidity, and neuroma formation. Biomaterials for engineering artificial nerves, particularly materials combined with supportive cells, display remarkable promising prospects. Schwann cells (SCs) are the absorbing seeding cells in peripheral nerve engineering repair; however, the attenuated biologic activity restricts their application. In this study, a magnetic nanocomposite scaffold fabricated from magnetic nanoparticles and a biodegradable chitosan–glycerophosphate polymer was made. Its structure was evaluated and characterized. The combined effects of magnetic scaffold (MG) with an applied magnetic field (MF) on the viability of SCs and peripheral nerve injury repair were investigated. The magnetic nanocomposite scaffold showed tunable magnetization and degradation rate. The MGs synergized with the applied MF to enhance the viability of SCs after transplantation. Furthermore, nerve regeneration and functional recovery were promoted by the synergism of SCs-loaded MGs and MF. Based on the current findings, the combined application of MGs and SCs with applied MF is a promising therapy for the engineering of peripheral nerve regeneration. PMID:29123395

Antecedent Synoptic Environments Conducive to North American Polar/Subtropical Jet Superpositions

NASA Astrophysics Data System (ADS)

Winters, A. C.; Keyser, D.; Bosart, L. F.

2017-12-01

The atmosphere often exhibits a three-step pole-to-equator tropopause structure, with each break in the tropopause associated with a jet stream. The polar jet stream (PJ) typically resides in the break between the polar and subtropical tropopause and is positioned atop the strongly baroclinic, tropospheric-deep polar front around 50°N. The subtropical jet stream (STJ) resides in the break between the subtropical and the tropical tropopause and is situated on the poleward edge of the Hadley cell around 30°N. On occasion, the latitudinal separation between the PJ and the STJ can vanish, resulting in a vertical jet superposition. Prior case study work indicates that jet superpositions are often attended by a vigorous transverse vertical circulation that can directly impact the production of extreme weather over North America. Furthermore, this work suggests that there is considerable variability among antecedent environments conducive to the production of jet superpositions. These considerations motivate a comprehensive study to examine the synoptic-dynamic mechanisms that operate within the double-jet environment to produce North American jet superpositions. This study focuses on the identification of North American jet superposition events in the CFSR dataset during November-March 1979-2010. Superposition events will be classified into three characteristic types: "Polar Dominant" events will consist of events during which only the PJ is characterized by a substantial excursion from its climatological latitude band; "Subtropical Dominant" events will consist of events during which only the STJ is characterized by a substantial excursion from its climatological latitude band; and "Hybrid" events will consist of those events characterized by an excursion of both the PJ and STJ from their climatological latitude bands. Following their classification, frequency distributions of jet superpositions will be constructed to highlight the geographical locations most often associated with jet superpositions for each event type. PV inversion and composite analysis will also be performed on each event type in an effort to illustrate the antecedent environments and the dominant synoptic-dynamic mechanisms that favor the production of North American jet superpositions for each event type.

Optimal subsystem approach to multi-qubit quantum state discrimination and experimental investigation

NASA Astrophysics Data System (ADS)

Xue, ShiChuan; Wu, JunJie; Xu, Ping; Yang, XueJun

2018-02-01

Quantum computing is a significant computing capability which is superior to classical computing because of its superposition feature. Distinguishing several quantum states from quantum algorithm outputs is often a vital computational task. In most cases, the quantum states tend to be non-orthogonal due to superposition; quantum mechanics has proved that perfect outcomes could not be achieved by measurements, forcing repetitive measurement. Hence, it is important to determine the optimum measuring method which requires fewer repetitions and a lower error rate. However, extending current measurement approaches mainly aiming at quantum cryptography to multi-qubit situations for quantum computing confronts challenges, such as conducting global operations which has considerable costs in the experimental realm. Therefore, in this study, we have proposed an optimum subsystem method to avoid these difficulties. We have provided an analysis of the comparison between the reduced subsystem method and the global minimum error method for two-qubit problems; the conclusions have been verified experimentally. The results showed that the subsystem method could effectively discriminate non-orthogonal two-qubit states, such as separable states, entangled pure states, and mixed states; the cost of the experimental process had been significantly reduced, in most circumstances, with acceptable error rate. We believe the optimal subsystem method is the most valuable and promising approach for multi-qubit quantum computing applications.

Non-classical State via Superposition of Two Opposite Coherent States

NASA Astrophysics Data System (ADS)

Ren, Gang; Du, Jian-ming; Yu, Hai-jun

2018-04-01

We study the non-classical properties of the states generated by superpositions of two opposite coherent states with the arbitrary relative phase factors. We show that the relative phase factors plays an important role in these superpositions. We demonstrate this result by discussing their squeezing properties, quantum statistical properties and fidelity in principle.

Ultrafast creation of large Schrödinger cat states of an atom.

PubMed

Johnson, K G; Wong-Campos, J D; Neyenhuis, B; Mizrahi, J; Monroe, C

2017-09-26

Mesoscopic quantum superpositions, or Schrödinger cat states, are widely studied for fundamental investigations of quantum measurement and decoherence as well as applications in sensing and quantum information science. The generation and maintenance of such states relies upon a balance between efficient external coherent control of the system and sufficient isolation from the environment. Here we create a variety of cat states of a single trapped atom's motion in a harmonic oscillator using ultrafast laser pulses. These pulses produce high fidelity impulsive forces that separate the atom into widely separated positions, without restrictions that typically limit the speed of the interaction or the size and complexity of the resulting motional superposition. This allows us to quickly generate and measure cat states larger than previously achieved in a harmonic oscillator, and create complex multi-component superposition states in atoms.Generation of mesoscopic quantum superpositions requires both reliable coherent control and isolation from the environment. Here, the authors succeed in creating a variety of cat states of a single trapped atom, mapping spin superpositions into spatial superpositions using ultrafast laser pulses.

Practical purification scheme for decohered coherent-state superpositions via partial homodyne detection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Suzuki, Shigenari; Department of Electronics and Electrical Engineering, Keio University, 3-14-1, Hiyoshi, Kohoku-ku, Yokohama, 223-8522; Takeoka, Masahiro

2006-04-15

We present a simple protocol to purify a coherent-state superposition that has undergone a linear lossy channel. The scheme constitutes only a single beam splitter and a homodyne detector, and thus is experimentally feasible. In practice, a superposition of coherent states is transformed into a classical mixture of coherent states by linear loss, which is usually the dominant decoherence mechanism in optical systems. We also address the possibility of producing a larger amplitude superposition state from decohered states, and show that in most cases the decoherence of the states are amplified along with the amplitude.

The principle of superposition and its application in ground-water hydraulics

USGS Publications Warehouse

Reilly, Thomas E.; Franke, O. Lehn; Bennett, Gordon D.

1987-01-01

The principle of superposition, a powerful mathematical technique for analyzing certain types of complex problems in many areas of science and technology, has important applications in ground-water hydraulics and modeling of ground-water systems. The principle of superposition states that problem solutions can be added together to obtain composite solutions. This principle applies to linear systems governed by linear differential equations. This report introduces the principle of superposition as it applies to ground-water hydrology and provides background information, discussion, illustrative problems with solutions, and problems to be solved by the reader.

The principle of superposition and its application in ground-water hydraulics

USGS Publications Warehouse

Reilly, T.E.; Franke, O.L.; Bennett, G.D.

1984-01-01

The principle of superposition, a powerful methematical technique for analyzing certain types of complex problems in many areas of science and technology, has important application in ground-water hydraulics and modeling of ground-water systems. The principle of superposition states that solutions to individual problems can be added together to obtain solutions to complex problems. This principle applies to linear systems governed by linear differential equations. This report introduces the principle of superposition as it applies to groundwater hydrology and provides background information, discussion, illustrative problems with solutions, and problems to be solved by the reader. (USGS)

Hidden Statistics Approach to Quantum Simulations

NASA Technical Reports Server (NTRS)

Zak, Michail

2010-01-01

Recent advances in quantum information theory have inspired an explosion of interest in new quantum algorithms for solving hard computational (quantum and non-quantum) problems. The basic principle of quantum computation is that the quantum properties can be used to represent structure data, and that quantum mechanisms can be devised and built to perform operations with this data. Three basic non-classical properties of quantum mechanics superposition, entanglement, and direct-product decomposability were main reasons for optimism about capabilities of quantum computers that promised simultaneous processing of large massifs of highly correlated data. Unfortunately, these advantages of quantum mechanics came with a high price. One major problem is keeping the components of the computer in a coherent state, as the slightest interaction with the external world would cause the system to decohere. That is why the hardware implementation of a quantum computer is still unsolved. The basic idea of this work is to create a new kind of dynamical system that would preserve the main three properties of quantum physics superposition, entanglement, and direct-product decomposability while allowing one to measure its state variables using classical methods. In other words, such a system would reinforce the advantages and minimize limitations of both quantum and classical aspects. Based upon a concept of hidden statistics, a new kind of dynamical system for simulation of Schroedinger equation is proposed. The system represents a modified Madelung version of Schroedinger equation. It preserves superposition, entanglement, and direct-product decomposability while allowing one to measure its state variables using classical methods. Such an optimal combination of characteristics is a perfect match for simulating quantum systems. The model includes a transitional component of quantum potential (that has been overlooked in previous treatment of the Madelung equation). The role of the transitional potential is to provide a jump from a deterministic state to a random state with prescribed probability density. This jump is triggered by blowup instability due to violation of Lipschitz condition generated by the quantum potential. As a result, the dynamics attains quantum properties on a classical scale. The model can be implemented physically as an analog VLSI-based (very-large-scale integration-based) computer, or numerically on a digital computer. This work opens a way of developing fundamentally new algorithms for quantum simulations of exponentially complex problems that expand NASA capabilities in conducting space activities. It has been illustrated that the complexity of simulations of particle interaction can be reduced from an exponential one to a polynomial one.

Teleportation of Unknown Superpositions of Collective Atomic Coherent States

NASA Astrophysics Data System (ADS)

Zheng, Shi-Biao

2001-06-01

We propose a scheme to teleport an unknown superposition of two atomic coherent states with different phases. Our scheme is based on resonant and dispersive atom-field interaction. Our scheme provides a possibility of teleporting macroscopic superposition states of many atoms first time. The project supported by National Natural Science Foundation of China under Grant No. 60008003

Student Ability to Distinguish between Superposition States and Mixed States in Quantum Mechanics

ERIC Educational Resources Information Center

Passante, Gina; Emigh, Paul J.; Shaffer, Peter S.

2015-01-01

Superposition gives rise to the probabilistic nature of quantum mechanics and is therefore one of the concepts at the heart of quantum mechanics. Although we have found that many students can successfully use the idea of superposition to calculate the probabilities of different measurement outcomes, they are often unable to identify the…

Nonclassical Properties of Q-Deformed Superposition Light Field State

NASA Technical Reports Server (NTRS)

Ren, Min; Shenggui, Wang; Ma, Aiqun; Jiang, Zhuohong

1996-01-01

In this paper, the squeezing effect, the bunching effect and the anti-bunching effect of the superposition light field state which involving q-deformation vacuum state and q-Glauber coherent state are studied, the controllable q-parameter of the squeezing effect, the bunching effect and the anti-bunching effect of q-deformed superposition light field state are obtained.

Dosimetry audit simulation of treatment planning system in multicenters radiotherapy

NASA Astrophysics Data System (ADS)

Kasmuri, S.; Pawiro, S. A.

2017-07-01

Treatment Planning System (TPS) is an important modality that determines radiotherapy outcome. TPS requires input data obtained through commissioning and the potentially error occurred. Error in this stage may result in the systematic error. The aim of this study to verify the TPS dosimetry to know deviation range between calculated and measurement dose. This study used CIRS phantom 002LFC representing the human thorax and simulated all external beam radiotherapy stages. The phantom was scanned using CT Scanner and planned 8 test cases that were similar to those in clinical practice situation were made, tested in four radiotherapy centers. Dose measurement using 0.6 cc ionization chamber. The results of this study showed that generally, deviation of all test cases in four centers was within agreement criteria with average deviation about -0.17±1.59 %, -1.64±1.92 %, 0.34±1.34 % and 0.13±1.81 %. The conclusion of this study was all TPS involved in this study showed good performance. The superposition algorithm showed rather poor performance than either analytic anisotropic algorithm (AAA) and convolution algorithm with average deviation about -1.64±1.92 %, -0.17±1.59 % and -0.27±1.51 % respectively.

Quantum-Inspired Maximizer

NASA Technical Reports Server (NTRS)

Zak, Michail

2008-01-01

A report discusses an algorithm for a new kind of dynamics based on a quantum- classical hybrid-quantum-inspired maximizer. The model is represented by a modified Madelung equation in which the quantum potential is replaced by different, specially chosen 'computational' potential. As a result, the dynamics attains both quantum and classical properties: it preserves superposition and entanglement of random solutions, while allowing one to measure its state variables, using classical methods. Such optimal combination of characteristics is a perfect match for quantum-inspired computing. As an application, an algorithm for global maximum of an arbitrary integrable function is proposed. The idea of the proposed algorithm is very simple: based upon the Quantum-inspired Maximizer (QIM), introduce a positive function to be maximized as the probability density to which the solution is attracted. Then the larger value of this function will have the higher probability to appear. Special attention is paid to simulation of integer programming and NP-complete problems. It is demonstrated that the problem of global maximum of an integrable function can be found in polynomial time by using the proposed quantum- classical hybrid. The result is extended to a constrained maximum with applications to integer programming and TSP (Traveling Salesman Problem).

Trackside acoustic diagnosis of axle box bearing based on kurtosis-optimization wavelet denoising

NASA Astrophysics Data System (ADS)

Peng, Chaoyong; Gao, Xiaorong; Peng, Jianping; Wang, Ai

2018-04-01

As one of the key components of railway vehicles, the operation condition of the axle box bearing has a significant effect on traffic safety. The acoustic diagnosis is more suitable than vibration diagnosis for trackside monitoring. The acoustic signal generated by the train axle box bearing is an amplitude modulation and frequency modulation signal with complex train running noise. Although empirical mode decomposition (EMD) and some improved time-frequency algorithms have proved to be useful in bearing vibration signal processing, it is hard to extract the bearing fault signal from serious trackside acoustic background noises by using those algorithms. Therefore, a kurtosis-optimization-based wavelet packet (KWP) denoising algorithm is proposed, as the kurtosis is the key indicator of bearing fault signal in time domain. Firstly, the geometry based Doppler correction is applied to signals of each sensor, and with the signal superposition of multiple sensors, random noises and impulse noises, which are the interference of the kurtosis indicator, are suppressed. Then, the KWP is conducted. At last, the EMD and Hilbert transform is applied to extract the fault feature. Experiment results indicate that the proposed method consisting of KWP and EMD is superior to the EMD.

Numerical research on the lateral global buckling characteristics of a high temperature and pressure pipeline with two initial imperfections

PubMed Central

Liu, Wenbin; Liu, Aimin

2018-01-01

With the exploitation of offshore oil and gas gradually moving to deep water, higher temperature differences and pressure differences are applied to the pipeline system, making the global buckling of the pipeline more serious. For unburied deep-water pipelines, the lateral buckling is the major buckling form. The initial imperfections widely exist in the pipeline system due to manufacture defects or the influence of uneven seabed, and the distribution and geometry features of initial imperfections are random. They can be divided into two kinds based on shape: single-arch imperfections and double-arch imperfections. This paper analyzed the global buckling process of a pipeline with 2 initial imperfections by using a numerical simulation method and revealed how the ratio of the initial imperfection’s space length to the imperfection’s wavelength and the combination of imperfections affects the buckling process. The results show that a pipeline with 2 initial imperfections may suffer the superposition of global buckling. The growth ratios of buckling displacement, axial force and bending moment in the superposition zone are several times larger than no buckling superposition pipeline. The ratio of the initial imperfection’s space length to the imperfection’s wavelength decides whether a pipeline suffers buckling superposition. The potential failure point of pipeline exhibiting buckling superposition is as same as the no buckling superposition pipeline, but the failure risk of pipeline exhibiting buckling superposition is much higher. The shape and direction of two nearby imperfections also affects the failure risk of pipeline exhibiting global buckling superposition. The failure risk of pipeline with two double-arch imperfections is higher than pipeline with two single-arch imperfections. PMID:29554123

Endohedral Metallofullerene as Molecular High Spin Qubit: Diverse Rabi Cycles in Gd2@C79N.

PubMed

Hu, Ziqi; Dong, Bo-Wei; Liu, Zheng; Liu, Jun-Jie; Su, Jie; Yu, Changcheng; Xiong, Jin; Shi, Di-Er; Wang, Yuanyuan; Wang, Bing-Wu; Ardavan, Arzhang; Shi, Zujin; Jiang, Shang-Da; Gao, Song

2018-01-24

An anisotropic high-spin qubit with long coherence time could scale the quantum system up. It has been proposed that Grover's algorithm can be implemented in such systems. Dimetallic aza[80]fullerenes M 2 @C 79 N (M = Y or Gd) possess an unpaired electron located between two metal ions, offering an opportunity to manipulate spin(s) protected in the cage for quantum information processing. Herein, we report the crystallographic determination of Gd 2 @C 79 N for the first time. This molecular magnet with a collective high-spin ground state (S = 15/2) generated by strong magnetic coupling (J Gd-Rad = 350 ± 20 cm -1 ) has been unambiguously validated by magnetic susceptibility experiments. Gd 2 @C 79 N has quantum coherence and diverse Rabi cycles, allowing arbitrary superposition state manipulation between each adjacent level. The phase memory time reaches 5 μs at 5 K by dynamic decoupling. This molecule fulfills the requirements of Grover's searching algorithm proposed by Leuenberger and Loss.

On the Use of Material-Dependent Damping in ANSYS for Mode Superposition Transient Analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nie, J.; Wei, X.

The mode superposition method is often used for dynamic analysis of complex structures, such as the seismic Category I structures in nuclear power plants, in place of the less efficient full method, which uses the full system matrices for calculation of the transient responses. In such applications, specification of material-dependent damping is usually desirable because complex structures can consist of multiple types of materials that may have different energy dissipation capabilities. A recent review of the ANSYS manual for several releases found that the use of material-dependent damping is not clearly explained for performing a mode superposition transient dynamic analysis.more » This paper includes several mode superposition transient dynamic analyses using different ways to specify damping in ANSYS, in order to determine how material-dependent damping can be specified conveniently in a mode superposition transient dynamic analysis.« less

Testing the quantum superposition principle: matter waves and beyond

NASA Astrophysics Data System (ADS)

Ulbricht, Hendrik

2015-05-01

New technological developments allow to explore the quantum properties of very complex systems, bringing the question of whether also macroscopic systems share such features, within experimental reach. The interest in this question is increased by the fact that, on the theory side, many suggest that the quantum superposition principle is not exact, departures from it being the larger, the more macroscopic the system. Testing the superposition principle intrinsically also means to test suggested extensions of quantum theory, so-called collapse models. We will report on three new proposals to experimentally test the superposition principle with nanoparticle interferometry, optomechanical devices and by spectroscopic experiments in the frequency domain. We will also report on the status of optical levitation and cooling experiments with nanoparticles in our labs, towards an Earth bound matter-wave interferometer to test the superposition principle for a particle mass of one million amu (atomic mass unit).

Using Directional Emissivity as a Probe of Particle Microphysical Properties

NASA Astrophysics Data System (ADS)

Pitman, K. M.; Wolff, M. J.; Bandfield, J. L.; Clayton, G. C.

2002-09-01

Real surfaces are not expected to be diffuse emitters, thus observed emissivity values are a function of viewing geometry. This fact has strong implications for analyses of the MGS/TES emission phase function (EPF) sequences and the upcoming Mars Exploration Rover mini-TES dataset. As reviewed previously [1], in the absence of strong thermal gradients, directional emissivity may be obtained via a combination of reciprocity and Kirchhoff's Law. Here we focus on the potential utility of directional emissivity as a direct probe of surface particle microphysical properties. We explore the effects of particle size and composition on observed radiances in the TES spectral regime using a combination of multiple scattering radiative transfer and Mie scattering algorithms. Comparisons of these simulated spectra to TES EPF observations of typical surface units (e.g., high and low albedo regions) will also be made. This work is supported through NASA grant NAGS-9820 (MJW) and LSU Board of Regents (KMP). [1] Pitman, K.M., et al. (2001), AAS-DPS meeting # 33, # 36.01.

Rocks Exposed on Slope in Aram Chaos

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-550, 20 November 2003

This spectacular vista of sedimentary rocks outcropping on a slope in Aram Chaos was acquired by the Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) on 14 November 2003. Dark piles of coarse talus have come down the slopes as these materials continue to erode over time. Note that there are no small meteor impact craters in this image, indicating that erosion of these outcrops has been recent, if not on-going. This area is located near 2.8oS, 20.5oW. The 200 meter scale bar is about 656 feet across. Sunlight illuminates the scene from the lower right.

Cycloidal Dust Devil Track

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-382, 5 June 2003

The spiraling feature near the center of this Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image is known as a cycloidal marking. Patterns like this can also occur on Earth. On Mars, the cycloidalpattern--and all of the other dark streaks in this picture--are thought to have been formed by passing dust devils. On Earth, cycloidal markings have been observed to result from some tornadoes. The pattern is created when more than one vortex (spinning column of air) is traveling, and spinning, together. This picture is near 62.9oS, 234.7oW. Sunlight illuminates the scene from the upper left.

Polar Cap Pits

NASA Technical Reports Server (NTRS)

2005-01-01

17 August 2005 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows kidney bean-shaped pits, and other pits, formed by erosion in a landscape of frozen carbon dioxide. This images shows one of about a dozen different patterns that are common in various locations across the martian south polar residual cap, an area that has been receiving intense scrutiny by the MGS MOC this year, because it is visible on every orbit and in daylight for most of 2005.

Location near: 86.9oS, 6.9oW Image width: width: 3 km (1.9 mi) Illumination from: upper left Season: Southern Spring

Defrosting Gully Aprons

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-398, 21 June 2003

This is a late winter Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) picture of frost-covered gullies in a crater in the martian southern hemisphere. The dark spots are areas where the frost has begun to change or sublime away. The gullies are formed by a combination of mass movement (landsliding) and possibly fluid flow through the channels--whether the fluid was liquid water or some other material is unknown. Today, the surfaces are dry and subjected to the seasonal coming-and-going of carbon dioxide frost. The image is located near 71.0oS, 95.5oW. Sunlight illuminates the scene from the upper left.

Studies of MGS TES and MPF MET Data

NASA Technical Reports Server (NTRS)

Barnes, Jeff R.

2003-01-01

The work supported by this grant was divided into two broad areas: (1) mesoscale modeling of atmospheric circulations and analyses of Pathfinder, Viking, and other Mars data, and (2) analyses of MGS TES temperature data. The mesoscale modeling began with the development of a suitable Mars mesoscale model based upon the terrestrial MM5 model, which was then applied to the simulation of the meteorological observations at the Pathfinder and Viking Lander 1 sites during northern summer. This extended study served a dual purpose: to validate the new mesoscale model with the best of the available in-situ data, and to use the model to aid in the interpretation of the surface meteorological data.

Streamlined Island

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-514, 15 October 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) picture shows a streamlined island in Marte Vallis, a large outflow channel system that crosses the 180oW meridian between the Elysium and Amazonis regions of Mars. The flow patterns on the floor of Marte Vallis might be the remains of lava flows or mud flows. Marte is the Spanish word for Mars. Most of the largest valleys on the red planet are named for 'Mars' in various languages. This island is located near 21.8oN, 175.3oW. The picture covers an area 3 km (1.9 mi) wide and is illuminated by sunlight from the lower left.

South Polar 'Poodle'

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-422, 15 July 2003

Have you ever stared up at the clouds in the sky and seen the shapes of animals, people, or objects? Sometimes when the Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) team is looking at newly-returned pictures from Mars, the same thing happens. This is a picture of pits and scarps in the frozen south polar carbon dioxide ice cap. Sunlight illuminates the scene from the upper right. At the bottom of the picture is a feature that resembles a long, thin poodle; its head faces to the left, the tail to the right. This picture is located near 86.9oS, 55.8oW.

Quantum state engineering by a coherent superposition of photon subtraction and addition

NASA Astrophysics Data System (ADS)

Lee, Su-Yong; Nha, Hyunchul

2011-10-01

We study a coherent superposition tâ+r↠of field annihilation and creation operator acting on continuous variable systems and propose its application for quantum state engineering. We propose an experimental scheme to implement this elementary coherent operation and discuss its usefulness to produce an arbitrary superposition of number states involving up to two photons.

Comparison of linear and square superposition hardening models for the surface nanoindentation of ion-irradiated materials

NASA Astrophysics Data System (ADS)

Xiao, Xiazi; Yu, Long

2018-05-01

Linear and square superposition hardening models are compared for the surface nanoindentation of ion-irradiated materials. Hardening mechanisms of both dislocations and defects within the plasticity affected region (PAR) are considered. Four sets of experimental data for ion-irradiated materials are adopted to compare with theoretical results of the two hardening models. It is indicated that both models describe experimental data equally well when the PAR is within the irradiated layer; whereas, when the PAR is beyond the irradiated region, the square superposition hardening model performs better. Therefore, the square superposition model is recommended to characterize the hardening behavior of ion-irradiated materials.

Composite and case study analyses of the large-scale environments associated with West Pacific Polar and subtropical vertical jet superposition events

NASA Astrophysics Data System (ADS)

Handlos, Zachary J.

Though considerable research attention has been devoted to examination of the Northern Hemispheric polar and subtropical jet streams, relatively little has been directed toward understanding the circumstances that conspire to produce the relatively rare vertical superposition of these usually separate features. This dissertation investigates the structure and evolution of large-scale environments associated with jet superposition events in the northwest Pacific. An objective identification scheme, using NCEP/NCAR Reanalysis 1 data, is employed to identify all jet superpositions in the west Pacific (30-40°N, 135-175°E) for boreal winters (DJF) between 1979/80 - 2009/10. The analysis reveals that environments conducive to west Pacific jet superposition share several large-scale features usually associated with East Asian Winter Monsoon (EAWM) northerly cold surges, including the presence of an enhanced Hadley Cell-like circulation within the jet entrance region. It is further demonstrated that several EAWM indices are statistically significantly correlated with jet superposition frequency in the west Pacific. The life cycle of EAWM cold surges promotes interaction between tropical convection and internal jet dynamics. Low potential vorticity (PV), high theta e tropical boundary layer air, exhausted by anomalous convection in the west Pacific lower latitudes, is advected poleward towards the equatorward side of the jet in upper tropospheric isentropic layers resulting in anomalous anticyclonic wind shear that accelerates the jet. This, along with geostrophic cold air advection in the left jet entrance region that drives the polar tropopause downward through the jet core, promotes the development of the deep, vertical PV wall characteristic of superposed jets. West Pacific jet superpositions preferentially form within an environment favoring the aforementioned characteristics regardless of EAWM seasonal strength. Post-superposition, it is shown that the west Pacific jet extends eastward and is associated with an upper tropospheric cyclonic (anticyclonic) anomaly in its left (right) exit region. A downstream ridge is present over northwest Canada, and within the strong EAWM environment, a wavier flow over North America is observed relative to the neutral EAWM environment. Preliminary investigation of the two weak EAWM season superpositions reveals a Kona Low type feature post-superposition. This is associated with anomalous convection reminiscent of an atmospheric river southwest of Mexico.

Improving spacecraft design using a multidisciplinary design optimization methodology

NASA Astrophysics Data System (ADS)

Mosher, Todd Jon

2000-10-01

Spacecraft design has gone from maximizing performance under technology constraints to minimizing cost under performance constraints. This is characteristic of the "faster, better, cheaper" movement that has emerged within NASA. Currently spacecraft are "optimized" manually through a tool-assisted evaluation of a limited set of design alternatives. With this approach there is no guarantee that a systems-level focus will be taken and "feasibility" rather than "optimality" is commonly all that is achieved. To improve spacecraft design in the "faster, better, cheaper" era, a new approach using multidisciplinary design optimization (MDO) is proposed. Using MDO methods brings structure to conceptual spacecraft design by casting a spacecraft design problem into an optimization framework. Then, through the construction of a model that captures design and cost, this approach facilitates a quicker and more straightforward option synthesis. The final step is to automatically search the design space. As computer processor speed continues to increase, enumeration of all combinations, while not elegant, is one method that is straightforward to perform. As an alternative to enumeration, genetic algorithms are used and find solutions by reviewing fewer possible solutions with some limitations. Both methods increase the likelihood of finding an optimal design, or at least the most promising area of the design space. This spacecraft design methodology using MDO is demonstrated on three examples. A retrospective test for validation is performed using the Near Earth Asteroid Rendezvous (NEAR) spacecraft design. For the second example, the premise that aerobraking was needed to minimize mission cost and was mission enabling for the Mars Global Surveyor (MGS) mission is challenged. While one might expect no feasible design space for an MGS without aerobraking mission, a counterintuitive result is discovered. Several design options that don't use aerobraking are feasible and cost effective. The third example is an original commercial lunar mission entitled Eagle-eye. This example shows how an MDO approach is applied to an original mission with a larger feasible design space. It also incorporates a simplified business case analysis.

Data compressive paradigm for multispectral sensing using tunable DWELL mid-infrared detectors.

PubMed

Jang, Woo-Yong; Hayat, Majeed M; Godoy, Sebastián E; Bender, Steven C; Zarkesh-Ha, Payman; Krishna, Sanjay

2011-09-26

While quantum dots-in-a-well (DWELL) infrared photodetectors have the feature that their spectral responses can be shifted continuously by varying the applied bias, the width of the spectral response at any applied bias is not sufficiently narrow for use in multispectral sensing without the aid of spectral filters. To achieve higher spectral resolutions without using physical spectral filters, algorithms have been developed for post-processing the DWELL's bias-dependent photocurrents resulting from probing an object of interest repeatedly over a wide range of applied biases. At the heart of these algorithms is the ability to approximate an arbitrary spectral filter, which we desire the DWELL-algorithm combination to mimic, by forming a weighted superposition of the DWELL's non-orthogonal spectral responses over a range of applied biases. However, these algorithms assume availability of abundant DWELL data over a large number of applied biases (>30), leading to large overall acquisition times in proportion with the number of biases. This paper reports a new multispectral sensing algorithm to substantially compress the number of necessary bias values subject to a prescribed performance level across multiple sensing applications. The algorithm identifies a minimal set of biases to be used in sensing only the relevant spectral information for remote-sensing applications of interest. Experimental results on target spectrometry and classification demonstrate a reduction in the number of required biases by a factor of 7 (e.g., from 30 to 4). The tradeoff between performance and bias compression is thoroughly investigated. © 2011 Optical Society of America

SU-F-T-444: Quality Improvement Review of Radiation Therapy Treatment Planning in the Presence of Dental Implants

DOE Office of Scientific and Technical Information (OSTI.GOV)

Parenica, H; Ford, J; Mavroidis, P

Purpose: To quantify and compare the effect of metallic dental implants (MDI) on dose distributions calculated using Collapsed Cone Convolution Superposition (CCCS) algorithm or a Monte Carlo algorithm (with and without correcting for the density of the MDI). Methods: Seven previously treated patients to the head and neck region were included in this study. The MDI and the streaking artifacts on the CT images were carefully contoured. For each patient a plan was optimized and calculated using the Pinnacle3 treatment planning system (TPS). For each patient two dose calculations were performed, a) with the densities of the MDI and CTmore » artifacts overridden (12 g/cc and 1 g/cc respectively) and b) without density overrides. The plans were then exported to the Monaco TPS and recalculated using Monte Carlo dose calculation algorithm. The changes in dose to PTVs and surrounding Regions of Interest (ROIs) were examined between all plans. Results: The Monte Carlo dose calculation indicated that PTVs received 6% lower dose than the CCCS algorithm predicted. In some cases, the Monte Carlo algorithm indicated that surrounding ROIs received higher dose (up to a factor of 2). Conclusion: Not properly accounting for dental implants can impact both the high dose regions (PTV) and the low dose regions (OAR). This study implies that if MDI and the artifacts are not appropriately contoured and given the correct density, there is potential significant impact on PTV coverage and OAR maximum doses.« less

Short-term secular change in height, body mass and Tanner-Whitehouse 3 skeletal maturity of Madeira youth, Portugal.

PubMed

Freitas, Duarte; Malina, Robert M; Maia, José; Lefevre, Johan; Stasinopoulos, Mikis; Gouveia, Élvio; Claessens, Albrecht; Thomis, Martine; Lausen, Berthold

2012-05-01

Secular trends in height and weight are reasonably well documented in Europe. Corresponding observations for skeletal maturation are lacking. To assess secular trends in height, body mass and skeletal maturity of Portuguese children and adolescents and to provide updated reference values for skeletal maturity scores (SMSs). Data for 2856 children and adolescents of 4-17 years, 1412 boys and 1444 girls, from The 'Madeira Growth Study' (MGS; 1996-1998) and from the'Healthy Growth of Madeira Children Study' (CRES; 2006) were used. Height and body mass were measured. Skeletal maturity was assessed with the Tanner-Whitehouse 2 and 3 methods. Children from CRES were taller and heavier than peers from MGS. Differences in height reached 5.8 cm in boys and 5.5 cm in girls. RUS SMSs did not differ consistently between surveys boys, while higher RUS scores were observed in CRES girls. Adult RUS SMSs for MGS and CRES combined were attained at 15.8 years in boys and 14.8 years in girls. Corresponding ages for adult Carpal SMSs were 14.4 and 14.0, respectively. The short-term trends for height and mass were not entirely consistent with the trends in RUS and Carpal SMSs and SAs.

Surveillance and reconnaissance ground system architecture

NASA Astrophysics Data System (ADS)

Devambez, Francois

2001-12-01

Modern conflicts induces various modes of deployment, due to the type of conflict, the type of mission, and phase of conflict. It is then impossible to define fixed architecture systems for surveillance ground segments. Thales has developed a structure for a ground segment based on the operational functions required, and on the definition of modules and networks. Theses modules are software and hardware modules, including communications and networks. This ground segment is called MGS (Modular Ground Segment), and is intended for use in airborne reconnaissance systems, surveillance systems, and U.A.V. systems. Main parameters for the definition of a modular ground image exploitation system are : Compliance with various operational configurations, Easy adaptation to the evolution of theses configurations, Interoperability with NATO and multinational forces, Security, Multi-sensors, multi-platforms capabilities, Technical modularity, Evolutivity Reduction of life cycle cost The general performances of the MGS are presented : type of sensors, acquisition process, exploitation of images, report generation, data base management, dissemination, interface with C4I. The MGS is then described as a set of hardware and software modules, and their organization to build numerous operational configurations. Architectures are from minimal configuration intended for a mono-sensor image exploitation system, to a full image intelligence center, for a multilevel exploitation of multi-sensor.

Sterilization of Escherichia coli O157:H7 using micro corona ionizer.

PubMed

Chua, Beelee; Son, Ahjeong

2014-06-01

We demonstrated in vitro sterilization of Escherichia coli O157:H7 bacteria on agar by a pin-between-planes micro corona ionizer. The gap between the pin and the grid was ~1.1 mm, the length of the grid was ~2.1 mm and the height was ~1.0 mm. The effective pin radius and discharge length were both approximated to be 200 μm. Ozone generation rates of ~2.3 × 10(-3) mg/s, ~2.7 × 10(-3) mg/s and ~3.5 × 10(-3) mg/s at 1,500 V were calculated for relative humidity (RH) of 35 %, 25 % and 10 % respectively. Analytical ozone generation rate increases as RH decreases and it is consistent with experimental observations. Using target and control petri dishes with E. coli plated agar, the sterilization capability of the micro corona ionizer at 37 °C for 24 h was evaluated. A ~60 % reduction in bacterial colony was shown with plate counting and its kill radius could be tuned from ~ 20 mm to ~5 mm by reducing the duty cycle from 100 % to 50 % with 30 min pulse width. The results suggested that the micro corona ionizer might be suitable as a tunable ozone source in wound dressing for chronic wound management.

Preliminary Correlations of Gravity and Topography from Mars Global Surveyor

NASA Technical Reports Server (NTRS)

Zuber, M. T.; Tyler, G. L.; Smith, D. E.; Balmino, G. S.; Johnson, G. L.; Lemoine, F. G.; Neumann, G. A.; Phillips, R. J.; Sjogren, W. L.; Solomon, S. C.

1999-01-01

The Mars Global Surveyor (MGS) spacecraft is currently in a 400-km altitude polar mapping orbit and scheduled to begin global mapping of Mars in March of 1999. Doppler tracking data collected in this Gravity Calibration Orbit prior to the nominal mapping mission combined with observations from the MGS Science Phasing Orbit in Spring - Summer 1999 and the Viking and mariner 9 orbiters has led to preliminary high resolution gravity fields. Spherical harmonic expansions have been performed to degree and order 70 and are characterized by the first high spatial resolution coverage of high latitudes. Topographic mapping by the Mars Orbiter Laser Altimeter on MGS is providing measurements of the height of the martian surface with sub-meter vertical resolution and 5-30 m absolute accuracy. Data obtained during the circular mapping phase are expected to provide the first high resolution measurements of surface heights in the southern hemisphere. The combination of gravity and topography measurements provides information on the structure of the planetary interior, i.e. the rigidity and distribution of internal density. The observations can also be used to address the mechanisms of support of surface topography. Preliminary results of correlations of gravity and topography at long planetary wavelengths will be presented and the implications for internal structure will be addressed.

Monoglyceride lipase as a drug target: At the crossroads of arachidonic acid metabolism and endocannabinoid signaling.

PubMed

Grabner, Gernot F; Zimmermann, Robert; Schicho, Rudolf; Taschler, Ulrike

2017-07-01

Monoglyerides (MGs) are short-lived, intermediary lipids deriving from the degradation of phospho- and neutral lipids, and monoglyceride lipase (MGL), also designated as monoacylglycerol lipase (MAGL), is the major enzyme catalyzing the hydrolysis of MGs into glycerol and fatty acids. This distinct function enables MGL to regulate a number of physiological and pathophysiological processes since both MGs and fatty acids can act as signaling lipids or precursors thereof. The most prominent MG species acting as signaling lipid is 2-arachidonoyl glycerol (2-AG) which is the most abundant endogenous agonist of cannabinoid receptors in the body. Importantly, recent observations demonstrate that 2-AG represents a quantitatively important source for arachidonic acid, the precursor of prostaglandins and other inflammatory mediators. Accordingly, MGL-mediated 2-AG degradation affects lipid signaling by cannabinoid receptor-dependent and independent mechanisms. Recent genetic and pharmacological studies gave important insights into MGL's role in (patho-)physiological processes, and the enzyme is now considered as a promising drug target for a number of disorders including cancer, neurodegenerative and inflammatory diseases. This review summarizes the basics of MG (2-AG) metabolism and provides an overview on the therapeutic potential of MGL. Copyright © 2017 Elsevier Inc. All rights reserved.

Common variants on chromosome 6p22.1 are associated with schizophrenia

PubMed Central

Shi, Jianxin; Levinson, Douglas F.; Duan, Jubao; Sanders, Alan R.; Zheng, Yonglan; Pe'er, Itsik; Dudbridge, Frank; Holmans, Peter A.; Whittemore, Alice S.; Mowry, Bryan J.; Olincy, Ann; Amin, Farooq; Cloninger, C. Robert; Silverman, Jeremy M.; Buccola, Nancy G.; Byerley, William F.; Black, Donald W.; Crowe, Raymond R.; Oksenberg, Jorge R.; Mirel, Daniel B.; Kendler, Kenneth S.; Freedman, Robert; Gejman, Pablo V.

2009-01-01

Schizophrenia, a devastating psychiatric disorder, has a prevalence of 0.5–1%, with high heritability (80–85%) and complex transmission.1 Recent studies implicate rare, large, high-penetrance copy number variants (CNVs) in some cases2, but it is not known what genes or biological mechanisms underlie susceptibility. Here we show that schizophrenia is significantly associated with single nucleotide polymorphisms (SNPs) in the extended Major Histocompatibility Complex (MHC) region on chromosome 6. We carried out a genome-wide association study (GWAS) of common SNPs in the Molecular Genetics of Schizophrenia (MGS) case-control sample, and then a meta-analysis of data from the MGS, International Schizophrenia Consortium (ISC) and SGENE datasets. No MGS finding achieved genome-wide statistical significance. In the meta-analysis of European-ancestry subjects (8,008 cases, 19,077 controls), significant association with schizophrenia was observed in a region of linkage disequilibrium on chromosome 6p22.1 (P = 9.54 × 10−9). This region includes a histone gene cluster and several immunity-related genes, possibly implicating etiologic mechanisms involving chromatin modification, transcriptional regulation, auto-immunity and/or infection. These results demonstrate that common schizophrenia susceptibility alleles can be detected. The characterization of these signals will suggest important directions for research on susceptibility mechanisms. PMID:19571809

The Martian crustal magnetic field as seen from MGS and MAVEN

NASA Astrophysics Data System (ADS)

Langlais, B.; Thebault, E.

2017-12-01

We present a new model of the Martian crustal magnetic field. This model combines constraints from all available measurements made by Mars Global Surveyor (1997-2006) and MAVEN (2014-). This is the first time a planet (besides the Earth) is flown twice with spacecraft providing high quality vector magnetic field measurements over its entire surface. Both missions have pros and cons which are fully taken into account and exploited. The constant altitude and local time of MGS during its (high altitude) mapping orbit phases allows to separate static, internal fields from transient, external fields. Low altitude measurements (below 250 km) by MAVEN allow to a posteriori validate MGS magnetic field measurements both on the day and night sides. The indirect estimates of the field intensity by the Electron Reflectometer experiment completes the dataset. The new model in constructed with carefully selected measurements, using local and extrapolated proxies to estimate the level of the external field activity. Tracks are individually checked to remove spurious or noisy measurements. The final model has a horizontal resolution close to 100 km. At a local scale, anomalies are better defined, which should ease their interpretation in terms of magnetization properties and processes. During this presentation we will compare this model to previous ones and discuss its new findings.

Continuous intensity map optimization (CIMO): A novel approach to leaf sequencing in step and shoot IMRT

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cao Daliang; Earl, Matthew A.; Luan, Shuang

2006-04-15

A new leaf-sequencing approach has been developed that is designed to reduce the number of required beam segments for step-and-shoot intensity modulated radiation therapy (IMRT). This approach to leaf sequencing is called continuous-intensity-map-optimization (CIMO). Using a simulated annealing algorithm, CIMO seeks to minimize differences between the optimized and sequenced intensity maps. Two distinguishing features of the CIMO algorithm are (1) CIMO does not require that each optimized intensity map be clustered into discrete levels and (2) CIMO is not rule-based but rather simultaneously optimizes both the aperture shapes and weights. To test the CIMO algorithm, ten IMRT patient cases weremore » selected (four head-and-neck, two pancreas, two prostate, one brain, and one pelvis). For each case, the optimized intensity maps were extracted from the Pinnacle{sup 3} treatment planning system. The CIMO algorithm was applied, and the optimized aperture shapes and weights were loaded back into Pinnacle. A final dose calculation was performed using Pinnacle's convolution/superposition based dose calculation. On average, the CIMO algorithm provided a 54% reduction in the number of beam segments as compared with Pinnacle's leaf sequencer. The plans sequenced using the CIMO algorithm also provided improved target dose uniformity and a reduced discrepancy between the optimized and sequenced intensity maps. For ten clinical intensity maps, comparisons were performed between the CIMO algorithm and the power-of-two reduction algorithm of Xia and Verhey [Med. Phys. 25(8), 1424-1434 (1998)]. When the constraints of a Varian Millennium multileaf collimator were applied, the CIMO algorithm resulted in a 26% reduction in the number of segments. For an Elekta multileaf collimator, the CIMO algorithm resulted in a 67% reduction in the number of segments. An average leaf sequencing time of less than one minute per beam was observed.« less

Multichannel Polarization-Controllable Superpositions of Orbital Angular Momentum States.

PubMed

Yue, Fuyong; Wen, Dandan; Zhang, Chunmei; Gerardot, Brian D; Wang, Wei; Zhang, Shuang; Chen, Xianzhong

2017-04-01

A facile metasurface approach is shown to realize polarization-controllable multichannel superpositions of orbital angular momentum (OAM) states with various topological charges. By manipulating the polarization state of the incident light, four kinds of superpositions of OAM states are realized using a single metasurface consisting of space-variant arrays of gold nanoantennas. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Mars Atmospheric CO2 Condensation Above the North and South Poles as Revealed by Radio Occultation, Climate Sounder, and Laser Ranging Observations

NASA Technical Reports Server (NTRS)

Hu, Renyu; Cahoy, Kerri; Zuber, Maria T.

2012-01-01

We study the condensation of CO2 in Mars atmosphere using temperature profilesretrieved from radio occultation measurements from Mars Global Surveyor (MGS) as wellas the climate sounding instrument onboard the Mars Reconnaissance Orbiter (MRO),and detection of reflective clouds by the MGS Mars Orbiter Laser Altimeter (MOLA). Wefind 11 events in 1999 where MGS temperature profiles indicate CO2 condensation andMOLA simultaneously detects reflective clouds. We thus provide causal evidence thatMOLA non-ground returns are associated with CO2 condensation, which strongly indicatestheir nature being CO2 clouds. The MGS and MRO temperature profiles together revealthe seasonal expansion and shrinking of the area and the vertical extent of atmosphericsaturation. The occurrence rate of atmospheric saturation is maximized at high latitudes inthe middle of winter. The atmospheric saturation in the northern polar region exhibits moreintense seasonal variation than in the southern polar region. In particular, a shrinking ofsaturation area and thickness from LS 270 to 300 in 2007 is found; this is probablyrelated to a planet-encircling dust storm. Furthermore, we integrate the condensation areaand the condensation occurrence rate to estimate cumulative masses of CO2 condensatesdeposited onto the northern and southern seasonal polar caps. The precipitation flux isapproximated by the particle settling flux which is estimated using the impulse responses ofMOLA filter channels. With our approach, the total atmospheric condensation mass canbe estimated from these observational data sets with average particle size as the onlyfree parameter. By comparison with the seasonal polar cap masses inferred from thetime-varying gravity of Mars, our estimates indicate that the average condensate particleradius is 822 mm in the northern hemisphere and 413 mm in the southern hemisphere.Our multi-instrument data analysis provides new constraints on modeling the global climateof Mars.

Measuring Mars' Atmospheric Neutral Density from 160 to 220km with the MGS Electron Reflectometer

NASA Astrophysics Data System (ADS)

Lillis, R.; Engel, J.; Mitchell, D.; Brain, D.; Lin, R.; Bougher, S.; Acuna, M.

2005-08-01

The Magnetometer/Electron Reflectometer (MAG/ER) experiment aboard Mars Global Surveyor (MGS) samples the local electron population's distribution in energy and pitch angle (angle between electron velocity and local magnetic field direction) at the mapping orbit altitude of ˜400km. We develop a single-particle model of the electrons' interaction with the neutral atmosphere and motion along open field-lines connecting the solar wind to remnant crustal magnetization. Electron reflection from magnetic gradients and absorption due to inelastic collisons with atmospheric neutrals results in characteristic pitch angle (PA) distributions for open field lines. By assuming the validity of spherical harmonic expansions (Cain et al, 2003) in the strongest field regions of Mars (such as Terra Sirenum), we trace the electron paths and fit these PA distributions to our model to constrain the scale height and density of the neutral atmosphere in the region of greatest absorption, 160-220km. We analyse almost 3 martian years of MGS mapping Orbit Data and present the first measurements of Mars' neutral density above 180km. Although the uncertainties in single measurements are quite large, averaging over many measurements over a period of weeks allows us to see long-term trends. Major results are: 1) a mean density of 0.03 kg/km3 at 160km with a month-averaged variation of ˜40%, 2) a very strong annual seasonal variation, confirmed by periodogram and least-squares fit and 3) increasing seasonal density variability with distance from the equator. We see broad general agreement with predictions from Mars Thermosphere Global Circulation Model (MTGCM) simulations [Bougher et al, 2004] and with inferred densities from MGS Doppler tracking data [Tracadas et al, 2001]. Our results will help to constrain the upper boundaries of GCMs and assist orbital decay calculations for low-orbiting spacecraft, such as the 2005 Mars Reconnaissance Orbiter. We thank the NASA Jet Propulsion Laboratory for funding assistance for this research.

Mars atmospheric CO2 condensation above the north and south poles as revealed by radio occultation, climate sounder, and laser ranging observations

NASA Astrophysics Data System (ADS)

Hu, Renyu; Cahoy, Kerri; Zuber, Maria T.

2012-07-01

We study the condensation of CO2 in Mars' atmosphere using temperature profiles retrieved from radio occultation measurements from Mars Global Surveyor (MGS) as well as the climate sounding instrument onboard the Mars Reconnaissance Orbiter (MRO), and detection of reflective clouds by the MGS Mars Orbiter Laser Altimeter (MOLA). We find 11 events in 1999 where MGS temperature profiles indicate CO2 condensation and MOLA simultaneously detects reflective clouds. We thus provide causal evidence that MOLA non-ground returns are associated with CO2 condensation, which strongly indicates their nature being CO2 clouds. The MGS and MRO temperature profiles together reveal the seasonal expansion and shrinking of the area and the vertical extent of atmospheric saturation. The occurrence rate of atmospheric saturation is maximized at high latitudes in the middle of winter. The atmospheric saturation in the northern polar region exhibits more intense seasonal variation than in the southern polar region. In particular, a shrinking of saturation area and thickness from LS ˜ 270° to ˜300° in 2007 is found; this is probably related to a planet-encircling dust storm. Furthermore, we integrate the condensation area and the condensation occurrence rate to estimate cumulative masses of CO2 condensates deposited onto the northern and southern seasonal polar caps. The precipitation flux is approximated by the particle settling flux which is estimated using the impulse responses of MOLA filter channels. With our approach, the total atmospheric condensation mass can be estimated from these observational data sets with average particle size as the only free parameter. By comparison with the seasonal polar cap masses inferred from the time-varying gravity of Mars, our estimates indicate that the average condensate particle radius is 8-22 μm in the northern hemisphere and 4-13 μm in the southern hemisphere. Our multi-instrument data analysis provides new constraints on modeling the global climate of Mars.

Electron density distribution and solar plasma correction of radio signals using MGS, MEX, and VEX spacecraft navigation data and its application to planetary ephemerides

NASA Astrophysics Data System (ADS)

Verma, A. K.; Fienga, A.; Laskar, J.; Issautier, K.; Manche, H.; Gastineau, M.

2013-02-01

The Mars Global Surveyor (MGS), Mars Express (MEX), and Venus Express (VEX) experienced several superior solar conjunctions. These conjunctions cause severe degradations of radio signals when the line of sight between the Earth and the spacecraft passes near to the solar corona region. The primary objective of this work is to deduce a solar corona model from the spacecraft navigation data acquired at the time of solar conjunctions and to estimate its average electron density. The corrected or improved data are then used to fit the dynamical modeling of the planet motions, called planetary ephemerides. We analyzed the radio science raw data of the MGS spacecraft using the orbit determination software GINS. The range bias, obtained from GINS and provided by ESA for MEX and VEX, are then used to derive the electron density profile. These profiles are obtained for different intervals of solar distances: from 12 R⊙ to 215 R⊙ for MGS, 6 R⊙ to 152 R⊙ for MEX, and from 12 R⊙ to 154 R⊙ for VEX. They are acquired for each spacecraft individually, for ingress and egress phases separately and both phases together, for different types of solar winds (fast, slow), and for solar activity phases (minimum, maximum). We compared our results with the previous estimations that were based on in situ measurements, and on solar type III radio and radio science studies made at different phases of solar activity and at different solar wind states. Our results are consistent with estimations obtained by these different methods. Moreover, fitting the planetary ephemerides including complementary data that were corrected for the solar corona perturbations, noticeably improves the extrapolation capability of the planetary ephemerides and the estimation of the asteroids masses. Tables 5, 6 and Appendix A are available in electronic form at http://www.aanda.org

Multifunctional microstructured polymer films for boosting solar power generation of silicon-based photovoltaic modules.

PubMed

Leem, Jung Woo; Choi, Minkyu; Yu, Jae Su

2015-02-04

We propose two-dimensional periodic conical micrograting structured (MGS) polymer films as a multifunctional layer (i.e., light harvesting and self-cleaning) at the surface of outer polyethylene terephthalate (PET) cover-substrates for boosting the solar power generation in silicon (Si)-based photovoltaic (PV) modules. The surface of ultraviolet-curable NOA63 MGS polymer films fabricated by the soft imprint lithography exhibits a hydrophobic property with water contact angle of ∼121° at no inclination and dynamic advancing/receding water contact angles of ∼132°/111° at the inclination angle of 40°, respectively, which can remove dust particles or contaminants on the surface of PV modules in real outdoor environments (i.e., self-cleaning). The NOA63 MGS film coated on the bare PET leads to the reduction of reflection as well as the enhancement of both the total and diffuse transmissions at wavelengths of 300-1100 nm, indicating lower solar weighted reflectance (RSW) of ∼8.2%, higher solar weighted transmittance (TSW) of ∼93.1%, and considerably improved average haze ratio (HAvg) of ∼88.3% as compared to the bare PET (i.e., RSW ≈ 13.5%, TSW ≈ 86.9%, and HAvg ≈ 9.1%), respectively. Additionally, it shows a relatively good durability at temperatures of ≤160 °C. The resulting Si PV module with the NOA63 MGS/PET has an enhanced power conversion efficiency (PCE) of 13.26% (cf., PCE = 12.55% for the reference PV module with the bare PET) due to the mainly improved short circuit current from 49.35 to 52.01 mA, exhibiting the PCE increment percentage of ∼5.7%. For light incident angle-dependent PV module current-voltage characteristics, superior solar energy conversion properties are also obtained in a broad angle range of 10-80°.

New Crustal Field Models of Mars

NASA Astrophysics Data System (ADS)

Mittelholz, A.; Morschhauser, A.; Johnson, C.

2017-12-01

The crustal magnetic field on Mars has been subject of extensive analysis, as it provides us with information about the history of the dynamo, the iron mineralogy of the crust, and the processes that have affected the acquisition and any subsequent modification of crustal magnetization. Mars Global Surveyor (MGS) measured strong, localized crustal magnetic fields, mostly occurring in the southern hemisphere. MGS data were taken mostly at altitudes of 360 - 440 km, with limited (geographically and in local time) observations obtained at lower altitudes. The Mars Atmosphere and Volatile EvolutioN (MAVEN) spacecraft has been in orbit since 2014. MAVEN magnetic field data complement those from MGS by globally expanding the spatial data distribution down to altitudes of 130 km, thus constraining shorter-wavelength structure in the field. Morschhauser et al. (2014) used the full MGS data set to build a spherical harmonic model for the crustal magnetic field up to spherical harmonic degree (l) and order (m) 110 ( λ≈195 km), while accounting for large-scale fields of non-crustal origin. We adopt a similar modeling approach, incorporating MAVEN data and inverting to higher l,m (e.g., λ≈130 km corresponds to l≈165). In order to avoid leakage of external field signals into the crustal field model, we select only nighttime data, use a modified Huber-Norm to treat data outliers and co-estimate a time-variable external field. We have also used another technique to model the field regionally. In this Equivalent Source Dipole (ESD) approach we solve for the magnetization of an assumed uniformly-magnetized layer, represented by equidistant dipoles placed at a single source depth. The ESD inversions indicate that shorter wavelength, weak signals are indeed resolvable in the MAVEN data. A comparison of the field models resulting from the two inversion techniques allows us to confidently identify new lithospheric field information available from the MAVEN observations.

Progressive Transformation between Two Magnetic Ground States for One Crystal Structure of a Chiral Molecular Magnet.

PubMed

Li, Li; Nishihara, Sadafumi; Inoue, Katsuya; Kurmoo, Mohamedally

2016-03-21

We report the exceptional observation of two different magnetic ground states (MGS), spin glass (SG, T(B) = 7 K) and ferrimagnet (FI, T(C) = 18 K), for one crystal structure of [{Mn(II)(D/L-NH2ala)}3{Mn(III)(CN)6}]·3H2O obtained from [Mn(CN)6](3-) and D/L-aminoalanine, in contrast to one MGS for [{Mn(II)(L-NH2ala)}3{Cr(III)(CN)6}]·3H2O. They consist of three Mn(NH2ala) helical chains bridged by M(III)(CN)6 to give the framework with disordered water molecules in channels and between the M(III)(CN)6. Both MGS are characterized by a negative Weiss constant, bifurcation in ZFC-FC magnetizations, blocking of the moments, both components of the ac susceptibilities, and hysteresis. They differ in the critical temperatures, absolute magnetization for 5 Oe FC (lack of spontaneous magnetization for the SG), and the shapes of the hysteresis and coercive fields. While isotropic pressure increases both T(crit) and the magnetizations linearly and reversibly in each case, dehydration progressively transforms the FI into the SG as followed by concerted in situ magnetic measurements and single-crystal diffraction. The relative strengths of the two moderate Mn(III)-CN-Mn(II) antiferromagnetic (J1 and J2), the weak Mn(II)-OCO-Mn(II) (J3), and Dzyaloshinkii-Moriya antisymmetric (DM) interactions generate the two sets of characters. Examination of the bond lengths and angles for several crystals and their corresponding magnetic properties reveals a correlation between the distortion of Mn(III)(CN)6 and the MGS. SG is favored by higher magnetic anisotropy by less distorted Mn(III)(CN)6 in good accordance with the Mn-Cr system. This conclusion is also born out of the magnetization measurements on orientated single crystals with fields parallel and perpendicular to the unique c axis of the hexagonal space group.

Orthopyroxene as a recorder of lunar crust evolution: An ion microprobe investigations of Mg-suite norites. [Abstract only

NASA Technical Reports Server (NTRS)

Papike, J. J.; Fowler, G. W.; Shearer, C. K.

1994-01-01

The lunar Mg suite, which includes dunites, troctolites, and norites, could make up 20-30% of the Moon's crust down to a depth of 60 km. The remainder is largely anorthositic. This report focuses on norites because we have found that the chemical characteristics of orthopyroxene are effective recorders of their parental melt compositions. Many of the samples representing the Mg suite are small and unrepresentative. In addition, they are cumulates and thus are difficult to study by whole-rock techniques. Therefore, we decided to study these rocks by SIMS techniques to analyze a suite of trace elements in orthopyroxene. The 12 norite samples were selected from a recent compilation by Warren who attempted to select the best candidate samples from the standpoint of their pristine character. Our present database includes greater than 300 superior Electromagnetic Pulse (EMP) analyses and greater than 50 scanning ion mass spectroscopy (SIMS) analyses for 8 Rare Earth Elements (REE), Zr, Y, and Sr. The Mg#s for the parental melts calculated from Mg#s in orthopyroxene show that most melts have Mg#s in the range of 0.36-0.60. This compares with a range of Mg#s for lunar volcanic picritic glass beads of 0.4-0.68. Therefore, although the cumulate whole-rock compositions of the Mg suite can be extremely magnesian, the calculated parental melts are not anomalously high in Mg. A chemical characteristic of the Mg-suite norites that is more difficult to explain is the high KREEP content of the calculated parental melts. The REE contents for the calculated norite parental melts have REE that match or exceed the high-K KREEP component of Warren. Therefore, mixing of a KREEP component and a picritic melt cannot, by itself, explain the high estimated REE contents of the melts parental to norites. Advanced crystallization following KREEP incorporation, especially of plagiclase, may also be required.

Complexity of Quantum Impurity Problems

NASA Astrophysics Data System (ADS)

Bravyi, Sergey; Gosset, David

2017-12-01

We give a quasi-polynomial time classical algorithm for estimating the ground state energy and for computing low energy states of quantum impurity models. Such models describe a bath of free fermions coupled to a small interacting subsystem called an impurity. The full system consists of n fermionic modes and has a Hamiltonian {H=H_0+H_{imp}}, where H 0 is quadratic in creation-annihilation operators and H imp is an arbitrary Hamiltonian acting on a subset of O(1) modes. We show that the ground energy of H can be approximated with an additive error {2^{-b}} in time {n^3 \\exp{[O(b^3)]}}. Our algorithm also finds a low energy state that achieves this approximation. The low energy state is represented as a superposition of {\\exp{[O(b^3)]}} fermionic Gaussian states. To arrive at this result we prove several theorems concerning exact ground states of impurity models. In particular, we show that eigenvalues of the ground state covariance matrix decay exponentially with the exponent depending very mildly on the spectral gap of H 0. A key ingredient of our proof is Zolotarev's rational approximation to the {√{x}} function. We anticipate that our algorithms may be used in hybrid quantum-classical simulations of strongly correlated materials based on dynamical mean field theory. We implemented a simplified practical version of our algorithm and benchmarked it using the single impurity Anderson model.

Highest-Resolution View of 'Face on Mars'

NASA Technical Reports Server (NTRS)

2001-01-01

A key aspect of the Mars Global Surveyor (MGS) Extended Mission is the opportunity to turn the spacecraft and point the Mars Orbiter Camera (MOC) at specific features of interest. A chance to point the spacecraft comes about ten times a week. Throughout the Primary Mission (March 1999 - January 2001), nearly all MGS operations were conducted with the spacecraft pointing 'nadir'--that is, straight down. In this orientation, opportunities to hit a specific small feature of interest were in some cases rare, and in other cases non-existent. In April 1998, nearly a year before MGS reached its Primary Mission mapping orbit, several tests of the spacecraft's ability to be pointed at specific features was conducted with great success (e.g., Mars Pathfinder landing site, Viking 1 site, and Cydonia landforms). When the Mars Polar Lander was lost in December 1999, this capability was again employed to search for the missing lander. Following the lander search activities, a plan to conduct similar off-nadir observations during the MGS Extended Mission was put into place. The Extended Mission began February 1, 2001. On April 8, 2001, the first opportunity since April 1998 arose to turn the spacecraft and point the MOC at the popular 'Face on Mars' feature.

Viking orbiter images acquired in 1976 showed that one of thousands of buttes, mesas, ridges, and knobs in the transition zone between the cratered uplands of western Arabia Terra and the low, northern plains of Mars looked somewhat like a human face. The feature was subsequently popularized as a potential 'alien artifact' in books, tabloids, radio talk shows, television, and even a major motion picture. Given the popularity of this landform, a new high-resolution view was targeted by pointing the spacecraft off-nadir on April 8, 2001. On that date at 20:54 UTC (8:54 p.m., Greenwich time zone), the MGS was rolled 24.8o to the left so that it was looking at the 'face' 165 km to the side from a distance of about 450 km. The resulting image has a resolution of about 2 meters (6.6 feet) per pixel. If present on Mars, objects the size of typical passenger jet airplanes would be distinguishable in an image of this scale. The large 'face' picture covers an area about 3.6 kilometers (2.2 miles) on a side. Sunlight illuminates the images from the left/lower left.

Osmium isotope and highly siderophile element systematics of the lunar crust

NASA Astrophysics Data System (ADS)

Day, James M. D.; Walker, Richard J.; James, Odette B.; Puchtel, Igor S.

2010-01-01

Coupled 187Os/ 188Os and highly siderophile element (HSE: Os, Ir, Ru, Pt, Pd, and Re) abundance data are reported for pristine lunar crustal rocks 60025, 62255, 65315 (ferroan anorthosites, FAN) and 76535, 78235, 77215 and a norite clast in 15455 (magnesian-suite rocks, MGS). Osmium isotopes permit more refined discrimination than previously possible of samples that have been contaminated by meteoritic additions and the new results show that some rocks, previously identified as pristine, contain meteorite-derived HSE. Low HSE abundances in FAN and MGS rocks are consistent with derivation from a strongly HSE-depleted lunar mantle. At the time of formation, the lunar floatation crust, represented by FAN, had 1.4 ± 0.3 pg g - 1 Os, 1.5 ± 0.6 pg g - 1 Ir, 6.8 ± 2.7 pg g - 1 Ru, 16 ± 15 pg g - 1 Pt, 33 ± 30 pg g - 1 Pd and 0.29 ± 0.10 pg g - 1 Re (˜ 0.00002 × CI) and Re/Os ratios that were modestly elevated ( 187Re/ 188Os = 0.6 to 1.7) relative to CI chondrites. MGS samples are, on average, characterised by more elevated HSE abundances (˜ 0.00007 × CI) compared with FAN. This either reflects contrasting mantle-source HSE characteristics of FAN and MGS rocks, or different mantle-crust HSE fractionation behaviour during production of these lithologies. Previous studies of lunar impact-melt rocks have identified possible elevated Ru and Pd in lunar crustal target rocks. The new results provide no supporting evidence for such enrichments. If maximum estimates for HSE in the lunar mantle are compared with FAN and MGS averages, crust-mantle concentration ratios ( D-values) must be ≤ 0.3. Such D-values are broadly similar to those estimated for partitioning between the terrestrial crust and upper mantle, with the notable exception of Re. Given the presumably completely different mode of origin for the primary lunar floatation crust and tertiary terrestrial continental crust, the potential similarities in crust-mantle HSE partitioning for the Earth and Moon are somewhat surprising. Low HSE abundances in the lunar crust, coupled with estimates of HSE concentrations in the lunar mantle implies there may be a 'missing component' of late-accreted materials (as much as 95%) to the Moon if the Earth/Moon mass-flux estimates are correct and terrestrial mantle HSE abundances were established by late accretion.

Osmium isotope and highly siderophile element systematics of the lunar crust

USGS Publications Warehouse

Day, J.M.D.; Walker, R.J.; James, O.B.; Puchtel, I.S.

2010-01-01

Coupled 187Os/188Os and highly siderophile element (HSE: Os, Ir, Ru, Pt, Pd, and Re) abundance data are reported for pristine lunar crustal rocks 60025, 62255, 65315 (ferroan anorthosites, FAN) and 76535, 78235, 77215 and a norite clast in 15455 (magnesian-suite rocks, MGS). Osmium isotopes permit more refined discrimination than previously possible of samples that have been contaminated by meteoritic additions and the new results show that some rocks, previously identified as pristine, contain meteorite-derived HSE. Low HSE abundances in FAN and MGS rocks are consistent with derivation from a strongly HSE-depleted lunar mantle. At the time of formation, the lunar floatation crust, represented by FAN, had 1.4 ?? 0.3 pg g- 1 Os, 1.5 ?? 0.6 pg g- 1 Ir, 6.8 ?? 2.7 pg g- 1 Ru, 16 ?? 15 pg g- 1 Pt, 33 ?? 30 pg g- 1 Pd and 0.29 ?? 0.10 pg g- 1 Re (??? 0.00002 ?? CI) and Re/Os ratios that were modestly elevated (187Re/188Os = 0.6 to 1.7) relative to CI chondrites. MGS samples are, on average, characterised by more elevated HSE abundances (??? 0.00007 ?? CI) compared with FAN. This either reflects contrasting mantle-source HSE characteristics of FAN and MGS rocks, or different mantle-crust HSE fractionation behaviour during production of these lithologies. Previous studies of lunar impact-melt rocks have identified possible elevated Ru and Pd in lunar crustal target rocks. The new results provide no supporting evidence for such enrichments. If maximum estimates for HSE in the lunar mantle are compared with FAN and MGS averages, crust-mantle concentration ratios (D-values) must be ??? 0.3. Such D-values are broadly similar to those estimated for partitioning between the terrestrial crust and upper mantle, with the notable exception of Re. Given the presumably completely different mode of origin for the primary lunar floatation crust and tertiary terrestrial continental crust, the potential similarities in crust-mantle HSE partitioning for the Earth and Moon are somewhat surprising. Low HSE abundances in the lunar crust, coupled with estimates of HSE concentrations in the lunar mantle implies there may be a 'missing component' of late-accreted materials (as much as 95%) to the Moon if the Earth/Moon mass-flux estimates are correct and terrestrial mantle HSE abundances were established by late accretion. ?? 2009 Elsevier B.V. All rights reserved.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Volkoff, T. J., E-mail: adidasty@gmail.com

We motivate and introduce a class of “hierarchical” quantum superposition states of N coupled quantum oscillators. Unlike other well-known multimode photonic Schrödinger-cat states such as entangled coherent states, the hierarchical superposition states are characterized as two-branch superpositions of tensor products of single-mode Schrödinger-cat states. In addition to analyzing the photon statistics and quasiprobability distributions of prominent examples of these nonclassical states, we consider their usefulness for highprecision quantum metrology of nonlinear optical Hamiltonians and quantify their mode entanglement. We propose two methods for generating hierarchical superpositions in N = 2 coupled microwave cavities, exploiting currently existing quantum optical technology formore » generating entanglement between spatially separated electromagnetic field modes.« less

Space-variant polarization patterns of non-collinear Poincaré superpositions

NASA Astrophysics Data System (ADS)

Galvez, E. J.; Beach, K.; Zeosky, J. J.; Khajavi, B.

2015-03-01

We present analysis and measurements of the polarization patterns produced by non-collinear superpositions of Laguerre-Gauss spatial modes in orthogonal polarization states, which are known as Poincaré modes. Our findings agree with predictions (I. Freund Opt. Lett. 35, 148-150 (2010)), that superpositions containing a C-point lead to a rotation of the polarization ellipse in 3-dimensions. Here we do imaging polarimetry of superpositions of first- and zero-order spatial modes at relative beam angles of 0-4 arcmin. We find Poincaré-type polarization patterns showing fringes in polarization orientation, but which preserve the polarization-singularity index for all three cases of C-points: lemons, stars and monstars.

Non-coaxial superposition of vector vortex beams.

PubMed

Aadhi, A; Vaity, Pravin; Chithrabhanu, P; Reddy, Salla Gangi; Prabakar, Shashi; Singh, R P

2016-02-10

Vector vortex beams are classified into four types depending upon spatial variation in their polarization vector. We have generated all four of these types of vector vortex beams by using a modified polarization Sagnac interferometer with a vortex lens. Further, we have studied the non-coaxial superposition of two vector vortex beams. It is observed that the superposition of two vector vortex beams with same polarization singularity leads to a beam with another kind of polarization singularity in their interaction region. The results may be of importance in ultrahigh security of the polarization-encrypted data that utilizes vector vortex beams and multiple optical trapping with non-coaxial superposition of vector vortex beams. We verified our experimental results with theory.

Oblique superposition of two elliptically polarized lightwaves using geometric algebra: is energy-momentum conserved?

PubMed

Sze, Michelle Wynne C; Sugon, Quirino M; McNamara, Daniel J

2010-11-01

In this paper, we use Clifford (geometric) algebra Cl(3,0) to verify if electromagnetic energy-momentum density is still conserved for oblique superposition of two elliptically polarized plane waves with the same frequency. We show that energy-momentum conservation is valid at any time only for the superposition of two counter-propagating elliptically polarized plane waves. We show that the time-average energy-momentum of the superposition of two circularly polarized waves with opposite handedness is conserved regardless of the propagation directions of the waves. And, we show that the resulting momentum density of the superposed waves generally has a vector component perpendicular to the momentum densities of the individual waves.

Catabolic regulation analysis of Escherichia coli and its crp, mlc, mgsA, pgi and ptsG mutants

PubMed Central

2011-01-01

Background Most bacteria can use various compounds as carbon sources. These carbon sources can be either co-metabolized or sequentially metabolized, where the latter phenomenon typically occurs as catabolite repression. From the practical application point of view of utilizing lignocellulose for the production of biofuels etc., it is strongly desirable to ferment all sugars obtained by hydrolysis from lignocellulosic materials, where simultaneous consumption of sugars would benefit the formation of bioproducts. However, most organisms consume glucose prior to consumption of other carbon sources, and exhibit diauxic growth. It has been shown by fermentation experiments that simultaneous consumption of sugars can be attained by ptsG, mgsA mutants etc., but its mechanism has not been well understood. It is strongly desirable to understand the mechanism of metabolic regulation for catabolite regulation to improve the performance of fermentation. Results In order to make clear the catabolic regulation mechanism, several continuous cultures were conducted at different dilution rates of 0.2, 0.4, 0.6 and 0.7 h-1 using wild type Escherichia coli. The result indicates that the transcript levels of global regulators such as crp, cra, mlc and rpoS decreased, while those of fadR, iclR, soxR/S increased as the dilution rate increased. These affected the metabolic pathway genes, which in turn affected fermentation result where the specific glucose uptake rate, the specific acetate formation rate, and the specific CO2 evolution rate (CER) were increased as the dilution rate was increased. This was confirmed by the 13C-flux analysis. In order to make clear the catabolite regulation, the effect of crp gene knockout (Δcrp) and crp enhancement (crp+) as well as mlc, mgsA, pgi and ptsG gene knockout on the metabolism was then investigated by the continuous culture at the dilution rate of 0.2 h-1 and by some batch cultures. In the case of Δcrp (and also Δmlc) mutant, TCA cycle and glyoxylate were repressed, which caused acetate accumulation. In the case of crp+ mutant, glycolysis, TCA cycle, and gluconeogenesis were activated, and simultaneous consumption of multiple carbon sources can be attained, but the glucose consumption rate became less due to repression of ptsG and ptsH by the activation of Mlc. Simultaneous consumption of multiple carbon sources could be attained by mgsA, pgi, and ptsG mutants due to increase in crp as well as cyaA, while glucose consumption rate became lower. Conclusions The transcriptional catabolite regulation mechanism was made clear for the wild type E. coli, and its crp, mlc, ptsG, pgi, and mgsA gene knockout mutants. The results indicate that catabolite repression can be relaxed and crp as well as cyaA can be increased by crp+, mgsA, pgi, and ptsG mutants, and thus simultaneous consumption of multiple carbon sources including glucose can be made, whereas the glucose uptake rate became lower as compared to wild type due to inactivation of ptsG in all the mutants considered. PMID:21831320

The effect of tandem-ovoid titanium applicator on points A, B, bladder, and rectum doses in gynecological brachytherapy using 192Ir.

PubMed

Sadeghi, Mohammad Hosein; Sina, Sedigheh; Mehdizadeh, Amir; Faghihi, Reza; Moharramzadeh, Vahed; Meigooni, Ali Soleimani

2018-02-01

The dosimetry procedure by simple superposition accounts only for the self-shielding of the source and does not take into account the attenuation of photons by the applicators. The purpose of this investigation is an estimation of the effects of the tandem and ovoid applicator on dose distribution inside the phantom by MCNP5 Monte Carlo simulations. In this study, the superposition method is used for obtaining the dose distribution in the phantom without using the applicator for a typical gynecological brachytherapy (superposition-1). Then, the sources are simulated inside the tandem and ovoid applicator to identify the effect of applicator attenuation (superposition-2), and the dose at points A, B, bladder, and rectum were compared with the results of superposition. The exact dwell positions, times of the source, and positions of the dosimetry points were determined in images of a patient and treatment data of an adult woman patient from a cancer center. The MCNP5 Monte Carlo (MC) code was used for simulation of the phantoms, applicators, and the sources. The results of this study showed no significant differences between the results of superposition method and the MC simulations for different dosimetry points. The difference in all important dosimetry points was found to be less than 5%. According to the results, applicator attenuation has no significant effect on the calculated points dose, the superposition method, adding the dose of each source obtained by the MC simulation, can estimate the dose to points A, B, bladder, and rectum with good accuracy.

Aram and Iani Chaos

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-344, 28 April 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image mosaic was constructed from data acquired by the MOC red wide angle camera. The large, circular feature in the upper left is Aram Chaos, an ancient impact crater filled with layered sedimentary rock that was later disrupted and eroded to form a blocky, 'chaotic' appearance. To the southeast of Aram Chaos, in the lower right of this picture, is Iani Chaos. The light-toned patches amid the large blocks of Iani Chaos are known from higher-resolution MOC images to be layered, sedimentary rock outcrops. The picture center is near 0.5oN, 20oW. Sunlight illuminates the scene from the left/upper left.

South Polar Scarps

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-438, 31 July 2003

The terrain of the south polar residual ice cap, made up mostly of frozen carbon dioxide, has come to be known by many as 'swiss cheese terrain,' because many areas of the cap resemble slices of swiss cheese. However, not all of the south polar cap looks like a tasty lunch food. This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a series of curving scarps formed by erosion and sublimation of carbon dioxide from the south polar cap. This area is located near 86.3oS, 51.2oW. The image is illuminated by sunlight from the upper left; the area is about 1.5 km (0.9 mi) wide.

MOLA TOPOGRAPHIC MAP

NASA Technical Reports Server (NTRS)

1999-01-01

The context image shows the latest MOLA topographic map of Mars' from latitude 55o S to the south pole. Values of elevation on the color scale are in meters. The along-track resolution of MOLA profiles is 330 m. Vertical precision of individual elevations approaches 37 cm. Absolute accuracy of the grid with respect to Mars' center of mass is <10 m. Note that there is a gap in data within 2.8o of the south pole due to the inclination of the MGS orbit. This gap will be filled in later this month by tilting the MGS spacecraft to an off-nadir ranging configuration. The MPL landing site region is between latitudes 72o and 78o S and longitudes 130o to 190o E.

Percentage depth dose calculation accuracy of model based algorithms in high energy photon small fields through heterogeneous media and comparison with plastic scintillator dosimetry.

PubMed

Alagar, Ananda Giri Babu; Mani, Ganesh Kadirampatti; Karunakaran, Kaviarasu

2016-01-08

Small fields smaller than 4 × 4 cm2 are used in stereotactic and conformal treatments where heterogeneity is normally present. Since dose calculation accuracy in both small fields and heterogeneity often involves more discrepancy, algorithms used by treatment planning systems (TPS) should be evaluated for achieving better treatment results. This report aims at evaluating accuracy of four model-based algorithms, X-ray Voxel Monte Carlo (XVMC) from Monaco, Superposition (SP) from CMS-Xio, AcurosXB (AXB) and analytical anisotropic algorithm (AAA) from Eclipse are tested against the measurement. Measurements are done using Exradin W1 plastic scintillator in Solid Water phantom with heterogeneities like air, lung, bone, and aluminum, irradiated with 6 and 15 MV photons of square field size ranging from 1 to 4 cm2. Each heterogeneity is introduced individually at two different depths from depth-of-dose maximum (Dmax), one setup being nearer and another farther from the Dmax. The central axis percentage depth-dose (CADD) curve for each setup is measured separately and compared with the TPS algorithm calculated for the same setup. The percentage normalized root mean squared deviation (%NRMSD) is calculated, which represents the whole CADD curve's deviation against the measured. It is found that for air and lung heterogeneity, for both 6 and 15 MV, all algorithms show maximum deviation for field size 1 × 1 cm2 and gradually reduce when field size increases, except for AAA. For aluminum and bone, all algorithms' deviations are less for 15 MV irrespective of setup. In all heterogeneity setups, 1 × 1 cm2 field showed maximum deviation, except in 6MV bone setup. All algorithms in the study, irrespective of energy and field size, when any heterogeneity is nearer to Dmax, the dose deviation is higher compared to the same heterogeneity far from the Dmax. Also, all algorithms show maximum deviation in lower-density materials compared to high-density materials.

Entanglement and quantum superposition induced by a single photon

NASA Astrophysics Data System (ADS)

Lü, Xin-You; Zhu, Gui-Lei; Zheng, Li-Li; Wu, Ying

2018-03-01

We predict the occurrence of single-photon-induced entanglement and quantum superposition in a hybrid quantum model, introducing an optomechanical coupling into the Rabi model. Originally, it comes from the photon-dependent quantum property of the ground state featured by the proposed hybrid model. It is associated with a single-photon-induced quantum phase transition, and is immune to the A2 term of the spin-field interaction. Moreover, the obtained quantum superposition state is actually a squeezed cat state, which can significantly enhance precision in quantum metrology. This work offers an approach to manipulate entanglement and quantum superposition with a single photon, which might have potential applications in the engineering of new single-photon quantum devices, and also fundamentally broaden the regime of cavity QED.

MGS Contingency Science Passes

NASA Technical Reports Server (NTRS)

1997-01-01

The Jet Propulsion Laboratory's Mars Surveyor Operations Project operates the Mars Global Surveyor spacecraft with its industrial partner, Lockheed Martin Astronautics, from facilities in Pasadena, CA and Denver, CO.

Estimating Concentrations of Road-Salt Constituents in Highway-Runoff from Measurements of Specific Conductance

USGS Publications Warehouse

Granato, Gregory E.; Smith, Kirk P.

1999-01-01

Discrete or composite samples of highway runoff may not adequately represent in-storm water-quality fluctuations because continuous records of water stage, specific conductance, pH, and temperature of the runoff indicate that these properties fluctuate substantially during a storm. Continuous records of water-quality properties can be used to maximize the information obtained about the stormwater runoff system being studied and can provide the context needed to interpret analyses of water samples. Concentrations of the road-salt constituents calcium, sodium, and chloride in highway runoff were estimated from theoretical and empirical relations between specific conductance and the concentrations of these ions. These relations were examined using the analysis of 233 highwayrunoff samples collected from August 1988 through March 1995 at four highway-drainage monitoring stations along State Route 25 in southeastern Massachusetts. Theoretically, the specific conductance of a water sample is the sum of the individual conductances attributed to each ionic species in solution-the product of the concentrations of each ion in milliequivalents per liter (meq/L) multiplied by the equivalent ionic conductance at infinite dilution-thereby establishing the principle of superposition. Superposition provides an estimate of actual specific conductance that is within measurement error throughout the conductance range of many natural waters, with errors of less than ?5 percent below 1,000 microsiemens per centimeter (?S/cm) and ?10 percent between 1,000 and 4,000 ?S/cm if all major ionic constituents are accounted for. A semi-empirical method (adjusted superposition) was used to adjust for concentration effects-superposition-method prediction errors at high and low concentrations-and to relate measured specific conductance to that calculated using superposition. The adjusted superposition method, which was developed to interpret the State Route 25 highway-runoff records, accounts for contributions of constituents other than calcium, sodium, and chloride in dilute waters. The adjusted superposition method also accounts for the attenuation of each constituent's contribution to conductance as ionic strength increases. Use of the adjusted superposition method generally reduced predictive error to within measurement error throughout the range of specific conductance (from 37 to 51,500 ?S/cm) in the highway runoff samples. The effects of pH, temperature, and organic constituents on the relation between concentrations of dissolved constituents and measured specific conductance were examined but these properties did not substantially affect interpretation of the Route 25 data set. Predictive abilities of the adjusted superposition method were similar to results obtained by standard regression techniques, but the adjusted superposition method has several advantages. Adjusted superposition can be applied using available published data about the constituents in precipitation, highway runoff, and the deicing chemicals applied to a highway. This semi-empirical method can be used as a predictive and diagnostic tool before a substantial number of samples are collected, but the power of the regression method is based upon a large number of water-quality analyses that may be affected by a bias in the data.

Viscous Effects in the Elastodynamics of Thick Beams

NASA Technical Reports Server (NTRS)

Johnson, A. R.; Tessler, A.

1997-01-01

A viscoelastic higher-order thick beam finite element formulation is extended to include elastodynamic deformations. The material constitutive law is a special differential form of the Maxwell solid. In the constitutive model, the elastic strains and the conjugate viscous strains are coupled through a system of first- order ordinary differential equations. The total time-dependent stress is the superposition of its elastic and viscous components. The elastodynamic equations of motion are derived from the virtual work principle. Computational examples are carried out for a thick orthotropic cantilevered beam. A quasi-static relaxation problem is employed as a validation test for the elastodynamic algorithm. The elastodynamic code is demonstrated by analyzing the damped vibrations of the beam which is deformed and then released to freely vibrate.

The effect of tandem-ovoid titanium applicator on points A, B, bladder, and rectum doses in gynecological brachytherapy using 192Ir

PubMed Central

Sadeghi, Mohammad Hosein; Mehdizadeh, Amir; Faghihi, Reza; Moharramzadeh, Vahed; Meigooni, Ali Soleimani

2018-01-01

Purpose The dosimetry procedure by simple superposition accounts only for the self-shielding of the source and does not take into account the attenuation of photons by the applicators. The purpose of this investigation is an estimation of the effects of the tandem and ovoid applicator on dose distribution inside the phantom by MCNP5 Monte Carlo simulations. Material and methods In this study, the superposition method is used for obtaining the dose distribution in the phantom without using the applicator for a typical gynecological brachytherapy (superposition-1). Then, the sources are simulated inside the tandem and ovoid applicator to identify the effect of applicator attenuation (superposition-2), and the dose at points A, B, bladder, and rectum were compared with the results of superposition. The exact dwell positions, times of the source, and positions of the dosimetry points were determined in images of a patient and treatment data of an adult woman patient from a cancer center. The MCNP5 Monte Carlo (MC) code was used for simulation of the phantoms, applicators, and the sources. Results The results of this study showed no significant differences between the results of superposition method and the MC simulations for different dosimetry points. The difference in all important dosimetry points was found to be less than 5%. Conclusions According to the results, applicator attenuation has no significant effect on the calculated points dose, the superposition method, adding the dose of each source obtained by the MC simulation, can estimate the dose to points A, B, bladder, and rectum with good accuracy. PMID:29619061

Accuracy of a teleported squeezed coherent-state superposition trapped into a high-Q cavity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sales, J. S.; Silva, L. F. da; Almeida, N. G. de

2011-03-15

We propose a scheme to teleport a superposition of squeezed coherent states from one mode of a lossy cavity to one mode of a second lossy cavity. Based on current experimental capabilities, we present a calculation of the fidelity demonstrating that accurate quantum teleportation can be achieved for some parameters of the squeezed coherent states superposition. The signature of successful quantum teleportation is present in the negative values of the Wigner function.

Accuracy of a teleported squeezed coherent-state superposition trapped into a high-Q cavity

NASA Astrophysics Data System (ADS)

Sales, J. S.; da Silva, L. F.; de Almeida, N. G.

2011-03-01

We propose a scheme to teleport a superposition of squeezed coherent states from one mode of a lossy cavity to one mode of a second lossy cavity. Based on current experimental capabilities, we present a calculation of the fidelity demonstrating that accurate quantum teleportation can be achieved for some parameters of the squeezed coherent states superposition. The signature of successful quantum teleportation is present in the negative values of the Wigner function.

Acceptance test of a commercially available software for automatic image registration of computed tomography (CT), magnetic resonance imaging (MRI) and 99mTc-methoxyisobutylisonitrile (MIBI) single-photon emission computed tomography (SPECT) brain images.

PubMed

Loi, Gianfranco; Dominietto, Marco; Manfredda, Irene; Mones, Eleonora; Carriero, Alessandro; Inglese, Eugenio; Krengli, Marco; Brambilla, Marco

2008-09-01

This note describes a method to characterize the performances of image fusion software (Syntegra) with respect to accuracy and robustness. Computed tomography (CT), magnetic resonance imaging (MRI), and single-photon emission computed tomography (SPECT) studies were acquired from two phantoms and 10 patients. Image registration was performed independently by two couples composed of one radiotherapist and one physicist by means of superposition of anatomic landmarks. Each couple performed jointly and saved the registration. The two solutions were averaged to obtain the gold standard registration. A new set of estimators was defined to identify translation and rotation errors in the coordinate axes, independently from point position in image field of view (FOV). Algorithms evaluated were local correlation (LC) for CT-MRI, normalized mutual information (MI) for CT-MRI, and CT-SPECT registrations. To evaluate accuracy, estimator values were compared to limiting values for the algorithms employed, both in phantoms and in patients. To evaluate robustness, different alignments between images taken from a sample patient were produced and registration errors determined. LC algorithm resulted accurate in CT-MRI registrations in phantoms, but exceeded limiting values in 3 of 10 patients. MI algorithm resulted accurate in CT-MRI and CT-SPECT registrations in phantoms; limiting values were exceeded in one case in CT-MRI and never reached in CT-SPECT registrations. Thus, the evaluation of robustness was restricted to the algorithm of MI both for CT-MRI and CT-SPECT registrations. The algorithm of MI proved to be robust: limiting values were not exceeded with translation perturbations up to 2.5 cm, rotation perturbations up to 10 degrees and roto-translational perturbation up to 3 cm and 5 degrees.

Poster — Thur Eve — 76: Dosimetric Comparison of Pinnacle and iPlan Algorithms with an Anthropomorphic Lung Phantom

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lopez, P.; Tambasco, M.; LaFontaine, R.

2014-08-15

Our goal is to compare the dosimetric accuracy of the Pinnacle-3 9.2 Collapsed Cone Convolution Superposition (CCCS) and the iPlan 4.1 Monte Carlo (MC) and Pencil Beam (PB) algorithms in an anthropomorphic lung phantom using measurement as the gold standard. Ion chamber measurements were taken for 6, 10, and 18 MV beams in a CIRS E2E SBRT Anthropomorphic Lung Phantom, which mimics lung, spine, ribs, and tissue. The plan implemented six beams with a 5×5 cm{sup 2} field size, delivering a total dose of 48 Gy. Data from the planning systems were computed at the treatment isocenter in the leftmore » lung, and two off-axis points, the spinal cord and the right lung. The measurements were taken using a pinpoint chamber. The best results between data from the algorithms and our measurements occur at the treatment isocenter. For the 6, 10, and 18 MV beams, iPlan 4.1 MC software performs the best with 0.3%, 0.2%, and 4.2% absolute percent difference from measurement, respectively. Differences between our measurements and algorithm data are much greater for the off-axis points. The best agreement seen for the right lung and spinal cord is 11.4% absolute percent difference with 6 MV iPlan 4.1 PB and 18 MV iPlan 4.1 MC, respectively. As energy increases absolute percent difference from measured data increases up to 54.8% for the 18 MV CCCS algorithm. This study suggests that iPlan 4.1 MC computes peripheral dose and target dose in the lung more accurately than the iPlan 4.1 PB and Pinnicale CCCS algorithms.« less

Organic Seston Dynamics in Upland Neotropical Streams: Implications for Amphibian Declines

NASA Astrophysics Data System (ADS)

Peterson, S. D.; Colon-Gaud, C.; Whiles, M. R.; Hunte-Brown, M.; Connelly, S.; Kilham, S.; Pringle, C. M.; Lips, K. R.; Brenes, R.

2005-05-01

Organic seston represents food for filter feeders and a mechanism for downstream transport of energy and nutrients. As part of a study assessing the ecological impacts of stream-breeding anuran extirpations, we examined seston dynamics in 2 stream reaches with tadpoles (El Cope) and 2 without (Fortuna) in the Panamanian uplands. All reaches are high gradient with annual average discharge ranging from 46-102 L/s. Samples were collected multiple times per month at various discharges, sieved into fine (<754μm, >98μm) and very fine (<98μm, >1.6μm) fractions, and processed to estimate ash-free dry mass (AFDM), total C, and total N. Average annual concentrations ranged from 0.52- 2.51 mg/L (fine) and 2.04-3.14 mg/L (very fine), and total export ranged from 0.27-7,981 mg/s across all streams. On average, very fine particles comprised 78% of export from El Cope sites and 61% from Fortuna streams. Average total N export ranged from 5.32-30.53 mg/s in El Cope sites and 1.71-6.04 mg/s at Fortuna. Average particle quality (C/N) in El Cope streams was higher (7.6) than Fortuna streams (11.5). Lower export of very fine particles and lower seston quality in Fortuna streams suggests the loss of tadpoles may influence seston dynamics and quality in these systems.

Distinguishing spinocerebellar ataxia with pure cerebellar manifestation from multiple system atrophy (MSA-C) through saccade profiles.

PubMed

Terao, Yasuo; Fukuda, Hideki; Tokushige, Shin-Ichi; Inomata-Terada, Satomi; Yugeta, Akihiro; Hamada, Masashi; Ugawa, Yoshikazu

2017-01-01

Patients with spinocerebellar ataxia with pure cerebellar presentation (SCD) and multiple system atrophy (MSA-C) show similar symptoms at early stages, although cerebellofugal pathology predominates in SCD, and cerebellopetal pathology in MSA-C. We studied whether saccade velocity profiles, which reflect the accelerating and braking functions of the cerebellum, can differentiate these two disorders. We recorded visually guided (VGS) and memory guided saccades (MGS) in 29 MSA-C patients, 12 SCD patients, and 92 age-matched normal subjects, and compared their amplitude, peak velocity and duration (accelerating and decelerating phases). Hypometria predominated in VGS and MGS of MSA-C, whereas hypometria was less marked in SCD, with hypermetria frequently noted in MGS. Peak velocity was reduced, and deteriorated with advancing disease both in SCD and MSA-C groups at smaller target eccentricities. The deceleration phase was prolonged in SCD compared to MSA-C and normal groups at larger target eccentricities, which deteriorated with advancing disease. Saccades in MSA-C were characterized by a more prominent acceleration deficit and those in SCD by a more prominent braking defect, possibly caused by the cerebellopetal and cerebellofugal pathologies, respectively. Saccade profiles provide important information regarding the accelerating and braking signals of the cerebellum in spinocerebellar ataxia. Copyright © 2016 International Federation of Clinical Neurophysiology. Published by Elsevier Ireland Ltd. All rights reserved.

Mars on 25 December 2003

NASA Technical Reports Server (NTRS)

2004-01-01

8 January 2004 This is how Mars appeared to the Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) wide angle system on 25 December 2003, the day that Beagle 2 and Mars Express reached the red planet. The large, dark region just left of center is Syrtis Major, a persistent low albedo terrain known to astronomers for nearly four centuries before the first spacecraft went to Mars. Immediately to the right (east) of Syrtis Major is the somewhat circular plain, Isidis Planitia. Beagle 2 arrived in Isidis Planitia only about 18 minutes before Mars Global Surveyor flew over the region and acquired a portion of this global view. Relative to other global images of Mars acquired by MGS over the past several martian years, the surface features were not as sharp and distinct on 25 December 2003 because of considerable haze kicked up by large dust storms in the western and southern hemispheres during th previous two weeks. The picture is a composite of several MGS MOC red and blue daily global images that have been map-projected and digitally wrapped to a sphere. Although the effect here is minor, inspection of this mosaic shows zones that appear smudged or blurry. The high dust opacity on 25 December impacted MOC's oblique viewing geometry toward the edges of each orbit's daily global mapping image, thus emphasizing the 'blurry' zones between images acquired on successive orbits.

GPU-Based Point Cloud Superpositioning for Structural Comparisons of Protein Binding Sites.

PubMed

Leinweber, Matthias; Fober, Thomas; Freisleben, Bernd

2018-01-01

In this paper, we present a novel approach to solve the labeled point cloud superpositioning problem for performing structural comparisons of protein binding sites. The solution is based on a parallel evolution strategy that operates on large populations and runs on GPU hardware. The proposed evolution strategy reduces the likelihood of getting stuck in a local optimum of the multimodal real-valued optimization problem represented by labeled point cloud superpositioning. The performance of the GPU-based parallel evolution strategy is compared to a previously proposed CPU-based sequential approach for labeled point cloud superpositioning, indicating that the GPU-based parallel evolution strategy leads to qualitatively better results and significantly shorter runtimes, with speed improvements of up to a factor of 1,500 for large populations. Binary classification tests based on the ATP, NADH, and FAD protein subsets of CavBase, a database containing putative binding sites, show average classification rate improvements from about 92 percent (CPU) to 96 percent (GPU). Further experiments indicate that the proposed GPU-based labeled point cloud superpositioning approach can be superior to traditional protein comparison approaches based on sequence alignments.

Coherent superposition of propagation-invariant laser beams

NASA Astrophysics Data System (ADS)

Soskind, R.; Soskind, M.; Soskind, Y. G.

2012-10-01

The coherent superposition of propagation-invariant laser beams represents an important beam-shaping technique, and results in new beam shapes which retain the unique property of propagation invariance. Propagation-invariant laser beam shapes depend on the order of the propagating beam, and include Hermite-Gaussian and Laguerre-Gaussian beams, as well as the recently introduced Ince-Gaussian beams which additionally depend on the beam ellipticity parameter. While the superposition of Hermite-Gaussian and Laguerre-Gaussian beams has been discussed in the past, the coherent superposition of Ince-Gaussian laser beams has not received significant attention in literature. In this paper, we present the formation of propagation-invariant laser beams based on the coherent superposition of Hermite-Gaussian, Laguerre-Gaussian, and Ince-Gaussian beams of different orders. We also show the resulting field distributions of the superimposed Ince-Gaussian laser beams as a function of the ellipticity parameter. By changing the beam ellipticity parameter, we compare the various shapes of the superimposed propagation-invariant laser beams transitioning from Laguerre-Gaussian beams at one ellipticity extreme to Hermite-Gaussian beams at the other extreme.

Bäcklund transformations for the Boussinesq equation and merging solitons

NASA Astrophysics Data System (ADS)

Rasin, Alexander G.; Schiff, Jeremy

2017-08-01

The Bäcklund transformation (BT) for the ‘good’ Boussinesq equation and its superposition principles are presented and applied. Unlike other standard integrable equations, the Boussinesq equation does not have a strictly algebraic superposition principle for 2 BTs, but it does for 3. We present this and discuss associated lattice systems. Applying the BT to the trivial solution generates both standard solitons and what we call ‘merging solitons’—solutions in which two solitary waves (with related speeds) merge into a single one. We use the superposition principles to generate a variety of interesting solutions, including superpositions of a merging soliton with 1 or 2 regular solitons, and solutions that develop a singularity in finite time which then disappears at a later finite time. We prove a Wronskian formula for the solutions obtained by applying a general sequence of BTs on the trivial solution. Finally, we obtain the standard conserved quantities of the Boussinesq equation from the BT, and show how the hierarchy of local symmetries follows in a simple manner from the superposition principle for 3 BTs.

A modified homotopy perturbation method and the axial secular frequencies of a non-linear ion trap.

PubMed

Doroudi, Alireza

2012-01-01

In this paper, a modified version of the homotopy perturbation method, which has been applied to non-linear oscillations by V. Marinca, is used for calculation of axial secular frequencies of a non-linear ion trap with hexapole and octopole superpositions. The axial equation of ion motion in a rapidly oscillating field of an ion trap can be transformed to a Duffing-like equation. With only octopole superposition the resulted non-linear equation is symmetric; however, in the presence of hexapole and octopole superpositions, it is asymmetric. This modified homotopy perturbation method is used for solving the resulting non-linear equations. As a result, the ion secular frequencies as a function of non-linear field parameters are obtained. The calculated secular frequencies are compared with the results of the homotopy perturbation method and the exact results. With only hexapole superposition, the results of this paper and the homotopy perturbation method are the same and with hexapole and octopole superpositions, the results of this paper are much more closer to the exact results compared with the results of the homotopy perturbation method.

Phylogenetic Copy-Number Factorization of Multiple Tumor Samples.

PubMed

Zaccaria, Simone; El-Kebir, Mohammed; Klau, Gunnar W; Raphael, Benjamin J

2018-04-16

Cancer is an evolutionary process driven by somatic mutations. This process can be represented as a phylogenetic tree. Constructing such a phylogenetic tree from genome sequencing data is a challenging task due to the many types of mutations in cancer and the fact that nearly all cancer sequencing is of a bulk tumor, measuring a superposition of somatic mutations present in different cells. We study the problem of reconstructing tumor phylogenies from copy-number aberrations (CNAs) measured in bulk-sequencing data. We introduce the Copy-Number Tree Mixture Deconvolution (CNTMD) problem, which aims to find the phylogenetic tree with the fewest number of CNAs that explain the copy-number data from multiple samples of a tumor. We design an algorithm for solving the CNTMD problem and apply the algorithm to both simulated and real data. On simulated data, we find that our algorithm outperforms existing approaches that either perform deconvolution/factorization of mixed tumor samples or build phylogenetic trees assuming homogeneous tumor samples. On real data, we analyze multiple samples from a prostate cancer patient, identifying clones within these samples and a phylogenetic tree that relates these clones and their differing proportions across samples. This phylogenetic tree provides a higher resolution view of copy-number evolution of this cancer than published analyses.

Demonstration of two-qubit algorithms with a superconducting quantum processor.

PubMed

DiCarlo, L; Chow, J M; Gambetta, J M; Bishop, Lev S; Johnson, B R; Schuster, D I; Majer, J; Blais, A; Frunzio, L; Girvin, S M; Schoelkopf, R J

2009-07-09

Quantum computers, which harness the superposition and entanglement of physical states, could outperform their classical counterparts in solving problems with technological impact-such as factoring large numbers and searching databases. A quantum processor executes algorithms by applying a programmable sequence of gates to an initialized register of qubits, which coherently evolves into a final state containing the result of the computation. Building a quantum processor is challenging because of the need to meet simultaneously requirements that are in conflict: state preparation, long coherence times, universal gate operations and qubit readout. Processors based on a few qubits have been demonstrated using nuclear magnetic resonance, cold ion trap and optical systems, but a solid-state realization has remained an outstanding challenge. Here we demonstrate a two-qubit superconducting processor and the implementation of the Grover search and Deutsch-Jozsa quantum algorithms. We use a two-qubit interaction, tunable in strength by two orders of magnitude on nanosecond timescales, which is mediated by a cavity bus in a circuit quantum electrodynamics architecture. This interaction allows the generation of highly entangled states with concurrence up to 94 per cent. Although this processor constitutes an important step in quantum computing with integrated circuits, continuing efforts to increase qubit coherence times, gate performance and register size will be required to fulfil the promise of a scalable technology.

Superposition Quantification

NASA Astrophysics Data System (ADS)

Chang, Li-Na; Luo, Shun-Long; Sun, Yuan

2017-11-01

The principle of superposition is universal and lies at the heart of quantum theory. Although ever since the inception of quantum mechanics a century ago, superposition has occupied a central and pivotal place, rigorous and systematic studies of the quantification issue have attracted significant interests only in recent years, and many related problems remain to be investigated. In this work we introduce a figure of merit which quantifies superposition from an intuitive and direct perspective, investigate its fundamental properties, connect it to some coherence measures, illustrate it through several examples, and apply it to analyze wave-particle duality. Supported by Science Challenge Project under Grant No. TZ2016002, Laboratory of Computational Physics, Institute of Applied Physics and Computational Mathematics, Beijing, Key Laboratory of Random Complex Structures and Data Science, Chinese Academy of Sciences, Grant under No. 2008DP173182

Zephyria Channel System

NASA Technical Reports Server (NTRS)

2004-01-01

10 September 2004 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a portion of an outflow channel system located in the Zephyria region, south of Cerberus, from which vast quantities of rough-surfaced material flowed. The channel system has no name and was not known prior to the MGS mission. The material that flowed through this system may have been extremely fluid lava, or it may have been water-rich mud. Research by members of the Mars science community regarding the nature and origin of flow materials in the Cerberus, Zephyria, and Marte Vallis regions of Mars is on-going. This image is located near 4.6oN, 204.1oW. The image covers an area approximately 3 km (1.9 mi) across and is illuminated by sunlight from the left/lower left.

Valley Near Nilus Chaos

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-504, 5 October 2003

This August 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a valley near Nilus Chaos, around 25.2oN, 80.3oW. The scene has a uniform albedo, indicating that all of the landforms are probably mantled by fine, bright dust. Dark streaks on the valley walls indicate places where recent dust avalanches have occurred. The ripple-like dune features on the valley floor were formed by wind, but today they are inactive and covered with dust. A few craters, created by impacting debris, have formed on the dunes, again attesting to their inactivity in the modern martian environment. The image covers an area 3 km (1.9 mi) wide; it is illuminated by sunlight from the lower left.

Carbon Dioxide Landscape

NASA Technical Reports Server (NTRS)

2005-01-01

23 July 2005 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a view of some of the widely-varied terrain of the martian south polar residual cap. The landforms here are composed mainly of frozen carbon dioxide. Each year since MGS arrived in 1997, the scarps that bound each butte and mesa, or line the edges of each pit, in the south polar region, have changed a little bit as carbon dioxide is sublimed away. The scarps retreat at a rate of about 3 meters (3 yards) per martian year. Most of the change occurs during each southern summer.

Location near: 86.7oS, 9.8oW Image width: width: 3 km (1.9 mi) Illumination from: upper left Season: Southern Spring

Dust Devil Art

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-541, 11 November 2003

In some regions of Mars, dust devils create streaks by disrupting or removing thin coatings of fine, bright dust from the surface. This summertime view of terrain in southern Noachis Terra, acquired by the Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC), provides an example. Streak patterns such as these are commonly created during the spring and summer in the southern hemisphere; in autumn and winter they are often erased--perhaps by deposition of a new coating of dust--and then a completely different pattern is formed the following spring and summer. This image is located near 59.6oS, 328.8oW. The picture is 3 km (1.9 mi) wide and illuminated by sunlight from the upper left.

Summertime Dust Devil

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-464, 26 August 2003

Dust devils are spinning, columnar vortices of air that move across a landscape, picking up dust as they go. They are common occurrences during summer on Mars. This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image, acquired during northern summer, shows a dust devil in the Phlegra region of Mars near 32.0oN, 182.1oW. Sunlight illuminates the scene from the lower left; the dust devil is casting a columnar shadow toward the upper right. Some dust devils on Mars make streaks as they disrupt the fine coating of dust on the surface--but others do not make streaks. This one did not make a streak. The view shown here is 3 km (1.9 mi) wide.

Carbon Dioxide Landscape

NASA Technical Reports Server (NTRS)

2004-01-01

7 July 2004 This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a mid-summer view of the south polar residual cap at full MOC resolution, 1.5 m (5 ft) per pixel. During each of the three summers since the start of the MGS mapping mission in March 1999, the scarps that form mesas and pits in the 'Swiss cheese'-like south polar terrain have retreated an average of about 3 meters (1 yard). The material is frozen carbon dioxide; another 3 meters or so of each scarp is expected to be removed during the next summer, in late 2005. This image is located near 86.0oS, 350.8oW, and covers an area about 1.5 km (0.9 mi) wide. Sunlight illuminates the scene from the top/upper left.

South Polar Artwork

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-456, 18 August 2003

Nature has created some interesting artwork on the south polar residual cap of Mars. This July 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows an example. The patterns in this picture are formed by erosion and sublimation of multiple layers of frozen carbon dioxide. The artwork is ephemeral and changing with each passing summer. By the end of the coming southern summer, the scarps in this area will have retreated an average of 3 meters (3.3 yards); some of the smaller buttes and ridges will have vanished. This picture covers an area 3 km (1.9 mi) wide and is located near 86.6oS, 358.2oW. Sunlight illuminates the scene from the upper left.

Performance of magnetic field‐guided navigation system for interventional neurosurgical and cardiac procedures

PubMed Central

Chu, James C.H.; Hsi, Wen Chien; Hubbard, Lincoln; Zhang, Yunkai; Bernard, Damian; Reeder, Pamela; Lopes, Demetrius

2005-01-01

A hospital‐based magnetic guidance system (MGS) was installed to assist a physician in navigating catheters and guide wires during interventional cardiac and neurosurgical procedures. The objective of this study is to examine the performance of this magnetic field‐guided navigation system. Our results show that the system's radiological imaging components produce images with quality similar to that produced by other modern fluoroscopic devices. The system's magnetic navigation components also deflect the wire and catheter tips toward the intended direction. The physician, however, will have to oversteer the wire or catheter when defining the steering angle during the procedure. The MGS could be clinically useful in device navigation deflection and vessel access. PACS numbers: 07.55.Db, 07.85.‐m PMID:16143799

Direct imaging and new technologies to search for substellar companions around MGs cool dwarfs

NASA Astrophysics Data System (ADS)

Gálvez-Ortiz, M. C.; Clarke, J. R. A.; Pinfield, D. J.; Folkes, S. L.; Jenkins, J. S.; García Pérez, A. E.; Burningham, B.; Day-Jones, A. C.; Jones, H. R. A.

2011-07-01

We describe here our project based in a search for sub-stellar companions (brown dwarfs and exo-planets) around young ultra-cool dwarfs (UCDs) and characterise their properties. We will use current and future technology (high contrast imaging, high-precision Doppler determinations) from the ground and space (VLT, ELT and JWST), to find companions to young objects. Members of young moving groups (MGs) have clear advantages in this field. We compiled a catalogue of young UCD objects and studied their membership to five known young moving groups: Local Association (Pleiades moving group, 20-150 Myr), Ursa Mayor group (Sirius supercluster, 300 Myr), Hyades supercluster (600 Myr), IC 2391 supercluster (35 Myr) and Castor moving group (200 Myr). To assess them as members we used different kinematic and spectroscopic criteria.

Finite-Length Line Source Superposition Model (FLLSSM)

NASA Astrophysics Data System (ADS)

1980-03-01

A linearized thermal conduction model was developed to economically determine media temperatures in geologic repositories for nuclear wastes. Individual canisters containing either high level waste or spent fuel assemblies were represented as finite length line sources in a continuous media. The combined effects of multiple canisters in a representative storage pattern were established at selected points of interest by superposition of the temperature rises calculated for each canister. The methodology is outlined and the computer code FLLSSM which performs required numerical integrations and superposition operations is described.

Construction Method of Analytical Solutions to the Mathematical Physics Boundary Problems for Non-Canonical Domains

NASA Astrophysics Data System (ADS)

Mobarakeh, Pouyan Shakeri; Grinchenko, Victor T.

2015-06-01

The majority of practical cases of acoustics problems requires solving the boundary problems in non-canonical domains. Therefore construction of analytical solutions of mathematical physics boundary problems for non-canonical domains is both lucrative from the academic viewpoint, and very instrumental for elaboration of efficient algorithms of quantitative estimation of the field characteristics under study. One of the main solving ideologies for such problems is based on the superposition method that allows one to analyze a wide class of specific problems with domains which can be constructed as the union of canonically-shaped subdomains. It is also assumed that an analytical solution (or quasi-solution) can be constructed for each subdomain in one form or another. However, this case implies some difficulties in the construction of calculation algorithms, insofar as the boundary conditions are incompletely defined in the intervals, where the functions appearing in the general solution are orthogonal to each other. We discuss several typical examples of problems with such difficulties, we study their nature and identify the optimal methods to overcome them.

FoldMiner and LOCK 2: protein structure comparison and motif discovery on the web.

PubMed

Shapiro, Jessica; Brutlag, Douglas

2004-07-01

The FoldMiner web server (http://foldminer.stanford.edu/) provides remote access to methods for protein structure alignment and unsupervised motif discovery. FoldMiner is unique among such algorithms in that it improves both the motif definition and the sensitivity of a structural similarity search by combining the search and motif discovery methods and using information from each process to enhance the other. In a typical run, a query structure is aligned to all structures in one of several databases of single domain targets in order to identify its structural neighbors and to discover a motif that is the basis for the similarity among the query and statistically significant targets. This process is fully automated, but options for manual refinement of the results are available as well. The server uses the Chime plugin and customized controls to allow for visualization of the motif and of structural superpositions. In addition, we provide an interface to the LOCK 2 algorithm for rapid alignments of a query structure to smaller numbers of user-specified targets.

Ultrasound-based measurement of liquid-layer thickness: A novel time-domain approach

NASA Astrophysics Data System (ADS)

Praher, Bernhard; Steinbichler, Georg

2017-01-01

Measuring the thickness of a thin liquid layer between two solid materials is important when the adequate separation of metallic parts by a lubricant film (e.g., in bearings or mechanical seals) is to be assessed. The challenge in using ultrasound-based systems for such measurements is that the signal from the liquid layer is a superposition of multiple reflections. We have developed an algorithm for reconstructing this superimposed signal in the time domain. By comparing simulated and measured signals, the time-of-flight of the ultrasonic pulse in a layer can be estimated. With the longitudinal sound velocity known, the layer thickness can then be calculated. In laboratory measurements, we validate successfully (maximum relative error 4.9%) our algorithm for layer thicknesses ranging from 30 μm to 200 μm. Furthermore, we tested our method in the high-temperature environment of polymer processing by measuring the clearance between screw and barrel in the plasticisation unit of an injection moulding machine. The results of such measurements can indicate (i) the wear status of the tribo-mechanical screw-barrel system and (ii) unsuitable process conditions.

Quantum mechanics over sets

NASA Astrophysics Data System (ADS)

Ellerman, David

2014-03-01

In models of QM over finite fields (e.g., Schumacher's ``modal quantum theory'' MQT), one finite field stands out, Z2, since Z2 vectors represent sets. QM (finite-dimensional) mathematics can be transported to sets resulting in quantum mechanics over sets or QM/sets. This gives a full probability calculus (unlike MQT with only zero-one modalities) that leads to a fulsome theory of QM/sets including ``logical'' models of the double-slit experiment, Bell's Theorem, QIT, and QC. In QC over Z2 (where gates are non-singular matrices as in MQT), a simple quantum algorithm (one gate plus one function evaluation) solves the Parity SAT problem (finding the parity of the sum of all values of an n-ary Boolean function). Classically, the Parity SAT problem requires 2n function evaluations in contrast to the one function evaluation required in the quantum algorithm. This is quantum speedup but with all the calculations over Z2 just like classical computing. This shows definitively that the source of quantum speedup is not in the greater power of computing over the complex numbers, and confirms the idea that the source is in superposition.

Resolving coiled shapes reveals new reorientation behaviors in C. elegans

PubMed Central

Broekmans, Onno D; Rodgers, Jarlath B; Ryu, William S; Stephens, Greg J

2016-01-01

We exploit the reduced space of C. elegans postures to develop a novel tracking algorithm which captures both simple shapes and also self-occluding coils, an important, yet unexplored, component of 2D worm behavior. We apply our algorithm to show that visually complex, coiled sequences are a superposition of two simpler patterns: the body wave dynamics and a head-curvature pulse. We demonstrate the precise Ω-turn dynamics of an escape response and uncover a surprising new dichotomy in spontaneous, large-amplitude coils; deep reorientations occur not only through classical Ω-shaped postures but also through larger postural excitations which we label here as δ-turns. We find that omega and delta turns occur independently, suggesting a distinct triggering mechanism, and are the serpentine analog of a random left-right step. Finally, we show that omega and delta turns occur with approximately equal rates and adapt to food-free conditions on a similar timescale, a simple strategy to avoid navigational bias. DOI: http://dx.doi.org/10.7554/eLife.17227.001 PMID:27644113

A model-based spike sorting algorithm for removing correlation artifacts in multi-neuron recordings.

PubMed

Pillow, Jonathan W; Shlens, Jonathon; Chichilnisky, E J; Simoncelli, Eero P

2013-01-01

We examine the problem of estimating the spike trains of multiple neurons from voltage traces recorded on one or more extracellular electrodes. Traditional spike-sorting methods rely on thresholding or clustering of recorded signals to identify spikes. While these methods can detect a large fraction of the spikes from a recording, they generally fail to identify synchronous or near-synchronous spikes: cases in which multiple spikes overlap. Here we investigate the geometry of failures in traditional sorting algorithms, and document the prevalence of such errors in multi-electrode recordings from primate retina. We then develop a method for multi-neuron spike sorting using a model that explicitly accounts for the superposition of spike waveforms. We model the recorded voltage traces as a linear combination of spike waveforms plus a stochastic background component of correlated Gaussian noise. Combining this measurement model with a Bernoulli prior over binary spike trains yields a posterior distribution for spikes given the recorded data. We introduce a greedy algorithm to maximize this posterior that we call "binary pursuit". The algorithm allows modest variability in spike waveforms and recovers spike times with higher precision than the voltage sampling rate. This method substantially corrects cross-correlation artifacts that arise with conventional methods, and substantially outperforms clustering methods on both real and simulated data. Finally, we develop diagnostic tools that can be used to assess errors in spike sorting in the absence of ground truth.

A Model-Based Spike Sorting Algorithm for Removing Correlation Artifacts in Multi-Neuron Recordings

PubMed Central

Chichilnisky, E. J.; Simoncelli, Eero P.

2013-01-01

We examine the problem of estimating the spike trains of multiple neurons from voltage traces recorded on one or more extracellular electrodes. Traditional spike-sorting methods rely on thresholding or clustering of recorded signals to identify spikes. While these methods can detect a large fraction of the spikes from a recording, they generally fail to identify synchronous or near-synchronous spikes: cases in which multiple spikes overlap. Here we investigate the geometry of failures in traditional sorting algorithms, and document the prevalence of such errors in multi-electrode recordings from primate retina. We then develop a method for multi-neuron spike sorting using a model that explicitly accounts for the superposition of spike waveforms. We model the recorded voltage traces as a linear combination of spike waveforms plus a stochastic background component of correlated Gaussian noise. Combining this measurement model with a Bernoulli prior over binary spike trains yields a posterior distribution for spikes given the recorded data. We introduce a greedy algorithm to maximize this posterior that we call “binary pursuit”. The algorithm allows modest variability in spike waveforms and recovers spike times with higher precision than the voltage sampling rate. This method substantially corrects cross-correlation artifacts that arise with conventional methods, and substantially outperforms clustering methods on both real and simulated data. Finally, we develop diagnostic tools that can be used to assess errors in spike sorting in the absence of ground truth. PMID:23671583

Active disturbance rejection control for output force creep characteristics of ionic polymer metal composites

NASA Astrophysics Data System (ADS)

Xiong, Yan; Chen, Yang; Sun, Zhiyong; Hao, Lina; Dong, Jie

2014-07-01

Ionic polymer metal composites (IPMCs) are a type of electroactive polymer (EAP) that can be used as both sensors and actuators. An IPMC has enormous potential application in the field of biomimetic robotics, medical devices, and so on. However, an IPMC actuator has a great number of disadvantages, such as creep and time-variation, making it vulnerable to external disturbances. In addition, the complex actuation mechanism makes it difficult to model and the demand of the control algorithm is laborious to implement. In this paper, we obtain a creep model of the IPMC by means of model identification based on the method of creep operator linear superposition. Although the mathematical model is not approximate to the IPMC accurate model, it is accurate enough to be used in MATLAB to prove the control algorithm. A controller based on the active disturbance rejection control (ADRC) method is designed to solve the drawbacks previously given. Because the ADRC controller is separate from the mathematical model of the controlled plant, the control algorithm has the ability to complete disturbance estimation and compensation. Some factors, such as all external disturbances, uncertainty factors, the inaccuracy of the identification model and different kinds of IPMCs, have little effect on controlling the output block force of the IPMC. Furthermore, we use the particle swarm optimization algorithm to adjust ADRC parameters so that the IPMC actuator can approach the desired block force with unknown external disturbances. Simulations and experimental examples validate the effectiveness of the ADRC controller.

Towards quantum superposition of a levitated nanodiamond with a NV center

NASA Astrophysics Data System (ADS)

Li, Tongcang

2015-05-01

Creating large Schrödinger's cat states with massive objects is one of the most challenging goals in quantum mechanics. We have previously achieved an important step of this goal by cooling the center-of-mass motion of a levitated microsphere from room temperature to millikelvin temperatures with feedback cooling. To generate spatial quantum superposition states with an optical cavity, however, requires a very strong quadratic coupling that is difficult to achieve. We proposed to optically trap a nanodiamond with a nitrogen-vacancy (NV) center in vacuum, and generate large spatial superposition states using the NV spin-optomechanical coupling in a strong magnetic gradient field. The large spatial superposition states can be used to study objective collapse theories of quantum mechanics. We have optically trapped nanodiamonds in air and are working towards this goal.

Mars Gravity Field and Upper Atmosphere from MGS, Mars Odyssey, and MRO

NASA Astrophysics Data System (ADS)

Genova, A.; Goossens, S. J.; Lemoine, F. G.; Mazarico, E.; Neumann, G. A.; Smith, D. E.; Zuber, M. T.

2015-12-01

The NASA orbital missions Mars Global Surveyor (MGS), Mars Odyssey (ODY), and Mars Reconnaissance Orbiter (MRO) have been exploring and monitoring the planet Mars since 1997. MGS executed its mapping mission between 1999 and 2006 in a frozen sun-synchronous, near-circular, polar orbit with the periapsis altitude at ~370 km and the dayside equatorial crossing at 2 pm Local Solar Time (LST). The spacecraft was equipped with onboard instrumentation to acquire radio science data and to measure spacecraft ranges to the Martian surface (Mars Orbiter Laser Altimeter). These measurements resulted in static and time-varying gravity field and high-resolution global topography of the planet. ODY and MRO are still orbiting about Mars in two different sun-synchronous orbits, providing radio tracking data that indirectly measure both the static and time-varying gravity field and the atmospheric density. The orbit of ODY has its periapsis at ~390 km altitude and descending node at 4-5 pm LST. However, the spacecraft also collected measurements at lower altitudes (~220 km) in 2002 prior to the mapping phase. Since November 2006, MRO is in a low-altitude orbit with a periapsis altitude of 255 km and descending node at 3 pm LST. Radio data from MRO help improve the resolution of the static gravity field and measure the mass distribution of the polar caps, but the atmospheric drag at those altitudes may limit the benefits of these radio tracking observations. We present a combined solution of the Martian gravity field to degree and order 110 and atmospheric density profiles with radio tracking data from MGS, ODY and MRO. The gravity field solution is combined with the MOLA topography yielding an updated map of Mars crustal thickness. We also show our solution of the Love number k2 and time-variable gravity zonal harmonics (C20 and C30, in particular). The recovered atmospheric density profiles may be used in atmospheric models to constrain the long-term variability of the constituents in the upper atmosphere.

Local structure and structural signature underlying properties in metallic glasses and supercooled liquids

NASA Astrophysics Data System (ADS)

Ding, Jun

Metallic glasses (MGs), discovered five decades ago as a newcomer in the family of glasses, are of current interest because of their unique structures and properties. There are also many fundamental materials science issues that remain unresolved for metallic glasses, as well as their predecessor above glass transition temperature, the supercooled liquids. In particular, it is a major challenge to characterize the local structure and unveil the structure-property relationship for these amorphous materials. This thesis presents a systematic study of the local structure of metallic glasses as well as supercooled liquids via classical and ab initio molecular dynamics simulations. Three typical MG models are chosen as representative candidate, Cu64 Zr36, Pd82Si18 and Mg65Cu 25Y10 systems, while the former is dominant with full icosahedra short-range order and the prism-type short-range order dominate for latter two. Furthermore, we move to unravel the underlying structural signature among several properties in metallic glasses. Firstly, the temperature dependence of specific heat and liquid fragility between Cu-Zr and Mg-Cu-Y (also Pd-Si) in supercooled liquids are quite distinct: gradual versus fast evolution of specific heat and viscosity/relaxation time with undercooling. Their local structural ordering are found to relate with the temperature dependence of specific heat and relaxation time. Then elastic heterogeneity has been studied to correlate with local structure in Cu-Zr MGs. Specifically, this part covers how the degree of elastic deformation correlates with the internal structure at the atomic level, how to quantitatively evaluate the local solidity/liquidity in MGs and how the network of interpenetrating connection of icosahedra determine the corresponding shear modulus. Finally, we have illustrated the structure signature of quasi-localized low-frequency vibrational normal modes, which resides the intriguing vibrational properties in MGs. Specifically, the local atomic packing structure in a model MG strongly correlate with the corresponding participation fraction in quasi-localized soft modes, while the highest and lowest participation correspond to geometrically unfavored motifs and ISRO respectively. In addition, we clearly demonstrate that quasi-localized low-frequency vibrational modes correlate strongly with fertile sites for shear transformations in a MG.

A novel variant of DNA polymerase ζ, Rev3ΔC, highlights differential regulation of Pol32 as a subunit of polymerase δ versus ζ in Saccharomyces cerevisiae

PubMed Central

Siebler, Hollie M.; Lada, Artem G.; Baranovskiy, Andrey G.; Tahirov, Tahir H.; Pavlov, Youri I.

2014-01-01

Unrepaired DNA lesions often stall replicative DNA polymerases and are bypassed by translesion synthesis (TLS) to prevent replication fork collapse. Mechanisms of TLS are lesion- and species-specific, with a prominent role of specialized DNA polymerases with relaxed active sites. After nucleotide(s) are incorporated across from the altered base(s), the aberrant primer termini are typically extended by DNA polymerase ζ (pol ζ). As a result, pol ζ is responsible for most DNA damage-induced mutations. The mechanisms of sequential DNA polymerase switches in vivo remain unclear. The major replicative DNA polymerase δ (pol δ) shares two accessory subunits, called Pol31/Pol32 in yeast, with pol ζ. Inclusion of Pol31/Pol32 in the pol δ/pol ζ holoenzymes requires a [4Fe–4S] cluster in C-termini of the catalytic subunits. Disruption of this cluster in Pol ζ or deletion of POL32 attenuates induced mutagenesis. Here we describe a novel mutation affecting the catalytic subunit of pol ζ, rev3ΔC, which provides insight into the regulation of pol switches. Strains with Rev3ΔC, lacking the entire C-terminal domain and therefore the platform for Pol31/Pol32 binding, are partially proficient in Pol32-dependent UV-induced mutagenesis. This suggests an additional role of Pol32 in TLS, beyond being a pol ζ subunit, related to pol δ. In search for members of this regulatory pathway, we examined the effects of Maintenance of Genome Stability 1 (Mgs1) protein on mutagenesis in the absence of Rev3–Pol31/Pol32 interaction. Mgs1 may compete with Pol32 for binding to PCNA. Mgs1 overproduction suppresses induced mutagenesis, but had no effect on UV-mutagenesis in the rev3ΔC strain, suggesting that Mgs1 exerts its inhibitory effect by acting specifically on Pol32 bound to pol ζ. The evidence for differential regulation of Pol32 in pol δ and pol ζ emphasizes the complexity of polymerase switches. PMID:24819597

Temperatures and aerosol opacities of the Mars atmosphere at aphelion: Validation and inter-comparison of limb sounding profiles from MRO/MCS and MGS/TES

NASA Astrophysics Data System (ADS)

Shirley, James H.; McConnochie, Timothy H.; Kass, David M.; Kleinböhl, Armin; Schofield, John T.; Heavens, Nicholas G.; McCleese, Daniel J.; Benson, Jennifer; Hinson, David P.; Bandfield, Joshua L.

2015-05-01

We exploit the relative stability and repeatability of the Mars atmosphere at aphelion for an inter-comparison of Mars Global Surveyor/Thermal Emission Spectrometer (MGS/TES) and Mars Reconnaissance Orbiter/Mars Climate Sounder (MRO/MCS) nighttime temperature profiles and aerosol opacity profiles in Mars years 25, 26, 29, 30, and 31. Cross-calibration of these datasets is important, as they together provide an extended climatology for this planetary atmosphere. As a standard of comparison we employ temperature profiles obtained by radio occultation methods during the MGS mission in Mars years 24, 25, and 26. We first compare both zonal mean TES limb sounding profiles and zonal mean MCS limb sounding profiles with zonal means of radio occultation temperature profiles for the same season (Ls = 70-80°) and latitudes (55-70°N). We employ a statistical z test for quantifying the degree of agreement of temperature profiles by pressure level. For pressures less than 610 Pa (altitudes > 3 km), the ensemble mean temperature difference between the radio occultation and TES limb sounding profiles found in these comparisons was 1.7 ± 0.7 K. The ensemble mean temperature difference between radio occultation and MCS profiles was 1.4 ± 1.0 K. These differences fall within the formal error estimates for both TES and MCS, validating the accuracy of the instruments and their respective retrieval algorithms. In the second phase of our investigation, we compare aphelion season zonal mean TES limb sounding temperature, water ice opacity, and dust opacity profiles with those obtained at the same latitudes in different years by MCS. The ensemble mean temperature difference found for three comparisons between TES and MCS zonal mean temperature profiles was 2.8 ± 2.1 K. MCS and TES temperatures between 610 Pa and 5 Pa from 55 to 70°N are largely in agreement (with differences < 2 K) when water ice aerosol opacities are comparable. Temperature differences increase when the opacities are dissimilar; TES profiles exhibit colder temperatures when TES water ice opacities are greater than those observed by MCS. Our comparisons reveal a possible systematic offset of TES and MCS temperatures at the highest altitudes resolved in the TES retrievals; TES temperatures are consistently colder than the corresponding MCS temperatures at pressures ⩽ 1 Pa (altitudes ⩾ 58 km). We otherwise find no evidence of systematic bias between TES limb sounding and MCS retrieved atmospheric quantities between 610 Pa and 1 Pa. Inter-annual variability is noted in comparisons of latitudinal temperature gradients from 55 to 70°N, in the amplitude of inversions linked with thermal tides in the middle atmosphere, and in the abundance and vertical distribution of water ice aerosols from 55 to 70°N during the aphelion season.

MetalS(3), a database-mining tool for the identification of structurally similar metal sites.

PubMed

Valasatava, Yana; Rosato, Antonio; Cavallaro, Gabriele; Andreini, Claudia

2014-08-01

We have developed a database search tool to identify metal sites having structural similarity to a query metal site structure within the MetalPDB database of minimal functional sites (MFSs) contained in metal-binding biological macromolecules. MFSs describe the local environment around the metal(s) independently of the larger context of the macromolecular structure. Such a local environment has a determinant role in tuning the chemical reactivity of the metal, ultimately contributing to the functional properties of the whole system. The database search tool, which we called MetalS(3) (Metal Sites Similarity Search), can be accessed through a Web interface at http://metalweb.cerm.unifi.it/tools/metals3/ . MetalS(3) uses a suitably adapted version of an algorithm that we previously developed to systematically compare the structure of the query metal site with each MFS in MetalPDB. For each MFS, the best superposition is kept. All these superpositions are then ranked according to the MetalS(3) scoring function and are presented to the user in tabular form. The user can interact with the output Web page to visualize the structural alignment or the sequence alignment derived from it. Options to filter the results are available. Test calculations show that the MetalS(3) output correlates well with expectations from protein homology considerations. Furthermore, we describe some usage scenarios that highlight the usefulness of MetalS(3) to obtain mechanistic and functional hints regardless of homology.

Aeolis Yardangs

NASA Image and Video Library

2006-01-12

This MGS MOC image shows a group of tapered ridges, known as yardangs, which formed by wind erosion of a relatively easily-eroded material, most likely sedimentary rock or volcanic ash deposits containing some fraction of sand-sized grains

Dunes in Brashear

NASA Image and Video Library

2006-01-08

This Mars Global Surveyor MGS Mars Orbiter Camera MOC image shows a field of dark sand dunes on the northwestern floor of Brashear Crater. The dunes formed largely from winds that blew from the southeast lower right

Participation in the Mars Orbiting Laser Altimeter Experiment

NASA Technical Reports Server (NTRS)

Pettengil, Gordon H.; Ford, Peter

2004-01-01

The Mars Orbiting Laser Altimeter (MOLA) instrument [1,2] carried aboard the Mars Global Surveyor (MGS) spacecraft, has observed strong echoes from cloud tops at 1.064 microns on 61% of its orbital passes over the winter north pole (235deg L(sub S), < 315deg) and on 58% of the passes over the winter south pole (45deg < L(sub S), < 135deg). The clouds are unlikely to be composed of water ice since the vapor pressure of H2O is very low at the Martian nighttime polar temperatures measured by the Thermal Emission Spectrometer (TES) [3], and by an analysis of MGS radio occultations [4]. Dust clouds can also be ruled out since no correlation is seen between clouds and global dust storms. The virtually certain composition for the winter polar clouds is CO2 ice.

Landslide!

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-486, 17 September 2003

This August 2003 Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows part of a deposit created by a landslide off the wall of a crater near 12.3oN, 21.3oW. The crater wall is not shown; it is several kilometers to the left of this picture. The debris that slid from the crater wall came from the left/upper left (northwest) and moved toward the lower right (southeast). The crater floor onto which the debris was deposited has more small meteor craters on it than does the landslide material; this indicates that there was a considerable interval between the time when the crater floor formed, and when the landslide occurred. This picture covers an area 3 km (1.9 mi) wide. Sunlight illuminates the scene from the lower left.

A Reassessment of the Mars Ocean Hypothesis

NASA Technical Reports Server (NTRS)

Parker, T. J.

2004-01-01

Initial work on the identification and mapping of potential ancient shorelines on Mars was based on Viking Orbiter image data (Parker et al., 1987, 1989, 1993). The Viking Orbiters were designed to locate landing site for the two landers and were not specifically intended to map the entire planet. Fortunately, they mapped the entire planet. Unfortunately, they did so at an average resolution of greater than 200m/pixel. Higher resolution images, even mosaics of interesting regions, are available, but relatively sparse. Mapping of shorelines on Earth requires both high-resolution aerial photos or satellite images and good topographic information. Three significant sources of additional data from missions subsequent to Viking are useful for reassessing the ocean hypothesis. These are: MGS MOC images; MGS MOLA topography; Odyssey THEMIS IR and VIS images; and MER surface geology at Meridiani and Gusev. Okay, my mistake: Four.

The Need for High-Resolution Crustal Magnetic Field Data on Mars

NASA Technical Reports Server (NTRS)

Raymond, C. A.; Russell, C. T.; Purucker, M. E.; Smrekar, S. E.

2000-01-01

Magnetometer observations from the Mars Global Surveyor spacecraft (MAG/ER on MGS) have confirmed that Mars does not presently have an internally-generated dipole magnetic field, and have also revealed intense remanent magnetism in the Martian crust. The remanent magnetic anomalies, most prevalent in the southern highlands region, are a record of the past history of the internal Mars dipole field. The MAG/ER data constitute a valuable data set for constraining the early thermal evolution of Mars and the history of the planetary magnetic field. However, the data lack the resolution needed to draw definite conclusions regarding the time history of the field. High-resolution magnetometer observations, obtained at low-altitude, are needed to complement and extend the MGS/ER data set and allow a definitive time history of the internal Mars dynamo to be constructed.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Góźdź, A., E-mail: andrzej.gozdz@umcs.lublin.pl; Góźdź, M., E-mail: mgozdz@kft.umcs.lublin.pl

The theory of neutrino oscillations rests on the assumption, that the interaction basis and the physical (mass) basis of neutrino states are different. Therefore neutrino is produced in a certain welldefined superposition of three mass eigenstates, which propagate separately and may be detected as a different superposition. This is called flavor oscillations. It is, however, not clear why neutrinos behave this way, i.e., what is the underlying mechanism which leads to the production of a superposition of physical states in a single reaction. In this paper we argue, that one of the reasons may be connected with the temporal structuremore » of the process. In order to discuss the role of time in processes on the quantum level, we use a special formulation of the quantum mechanics, which is based on the projection time evolution. We arrive at the conclusion, that for short reaction times the formation of a superposition of states of similar masses is natural.« less

Transient Response of Shells of Revolution by Direct Integration and Modal Superposition Methods

NASA Technical Reports Server (NTRS)

Stephens, W. B.; Adelman, H. M.

1974-01-01

The results of an analytical effort to obtain and evaluate transient response data for a cylindrical and a conical shell by use of two different approaches: direct integration and modal superposition are described. The inclusion of nonlinear terms is more important than the inclusion of secondary linear effects (transverse shear deformation and rotary inertia) although there are thin-shell structures where these secondary effects are important. The advantages of the direct integration approach are that geometric nonlinear and secondary effects are easy to include and high-frequency response may be calculated. In comparison to the modal superposition technique the computer storage requirements are smaller. The advantages of the modal superposition approach are that the solution is independent of the previous time history and that once the modal data are obtained, the response for repeated cases may be efficiently computed. Also, any admissible set of initial conditions can be applied.

Mars Gravity Field Model Development from Mars Global Surveyor Tracking Data

NASA Technical Reports Server (NTRS)

Lemoine, F. G.; Zuber, M. T.

1999-01-01

Since Feb. 99 the MGS spacecraft has been in a near circular orbit at about 400 km altitude. The MGS has been regularly tracked by the Deep Space Network (DSN) at X-band and for a 3 week period in February was tracked almost continuously for an intensive gravity modeling activity that would form the basis of the orbital computations for the rest of the mission. The data collected during this calibration period and the earlier SPO and Hiatus periods have now been used to develop a new gravity field model for Mars that is showing considerable new detail in both the northern and southern hemispheres. Until February no data at 400 km altitude or lower had been acquired on any previous mission south of about 35S and all the previous data were of significantly lower quality. Low altitude data (-170 km) were obtained over the higher latitudes of the northern hemisphere during the SPO periods but because of the high eccentricity of the orbit nothing of similar quality was obtainable for the southern hemisphere. The new models are of spherical harmonic degree and order 70 or higher and are suggesting large anomalies are often associated with the large impact features. Gravity data have also been obtained over both the northern and southern polar ice caps. The MGS orbit quality resulting from the use of these newer models is better than any previous Mars missions and is approaching the ten's of meter level that had been hoped would be eventually realizable.

Cell cycle inhibition limits development and maintenance of neuropathic pain following spinal cord injury

PubMed Central

Wu, Junfang; Zhao, Zaorui; Zhu, Xiya; Renn, Cynthia L.; Dorsey, Susan G.; Faden, Alan I.

2016-01-01

Chronic pain after spinal cord injury (SCI) may present as hyperalgesia, allodynia, and/or spontaneous pain and is often resistant to conventional pain medications. Identifying more effective interventions to manage SCI-Pain requires improved understanding of the pathophysiological mechanisms involved. Cell cycle activation (CCA) has been implicated as a key pathophysiological event following SCI. We have shown that early central or systemic administration of a cell cycle inhibitor reduces CCA, prevents glial changes, and limits SCI-induced hyperesthesia. Here we compared the effects of early versus late treatment with the pan-cyclin dependent kinase inhibitor flavopiridol on allodynia as well as spontaneous pain. Adult C57BL/6 male mice subjected to moderate SCI were treated with intraperitoneal injections of flavopiridol (1 mg/kg), daily for 7 days beginning either 3 h or 5 weeks after injury. Mechanical/thermal allodynia was evaluated, as well as spontaneous pain using the mouse grimace scale (MGS). We show that sensitivity to mechanical and thermal stimulation, and locomotor dysfunction were significantly reduced by early flavopiridol treatment compared to vehicle treated controls. SCI caused robust and extended increases of MGS up to 3 weeks after trauma. Early administration of flavopiridol significantly shortened duration of MGS changes. Late flavopiridol intervention significantly limited hyperesthesia at 7 days after treatment, associated with reduced glial changes, but without effect on locomotion. Thus, our data suggest that cell cycle modulation may provide an effective therapeutic strategy to reduce hyperesthesia after SCI, with a prolonged therapeutic window. PMID:26797506

Improved respirable fraction of budesonide powder for dry powder inhaler formulations produced by advanced supercritical CO2 processing and use of a novel additive.

PubMed

Miyazaki, Yuta; Aruga, Naoki; Kadota, Kazunori; Tozuka, Yuichi; Takeuchi, Hirofumi

2017-08-07

A budesonide (BDS) suspension was obtained via advanced supercritical carbon dioxide (scCO 2 ) processing. Thereafter, the suspension was freeze-dried (FD) to produce BDS particles for dry powder inhaler formulations (scCO 2 /FD processing). The scCO 2 /FD processed BDS powder showed low crystallinity by powder X-ray diffraction and a rough surface by scanning electron microscopy. The respirable fraction of BDS was assessed using a twin impinger and revealed that the amount of the scCO 2 /FD processed sample that reached stage 2 was 4-fold higher than that of the supplied powder. To extend the utility of scCO 2 processing, BDS particles for dry powder inhalers were fabricated by combining the scCO 2 system with various additives. When BDS was processed via scCO 2 /FD in the presence of the novel additive, namely, monoglyceride stearate (MGS), the residual BDS/MGS particles remaining in the capsule and devices decreased, followed by an increase in the respirable fraction of BDS 6-fold higher than with the supplied powder. The scCO 2 /FD processed BDS/MGS particles had a smooth surface, in contrast to the scCO 2 /FD processed BDS particles. A combination of BDS and an appropriate additive in scCO 2 treatment may induce changes in particle surface morphology, leading to an improvement in the inhalation properties of BDS. Copyright © 2017 Elsevier B.V. All rights reserved.

Thulium fiber laser lithotripsy using small spherical distal fiber tips

NASA Astrophysics Data System (ADS)

Wilson, Christopher R.; Hardy, Luke A.; Kennedy, Joshua D.; Irby, Pierce B.; Fried, Nathaniel M.

2016-02-01

This study tests a 100-μm-core fiber with 300-μm-diameter ball tip during Thulium fiber laser (TFL) lithotripsy. The TFL was operated at 1908 nm wavelength with 35-mJ pulse energy, 500-μs pulse duration, and 300-Hz pulse rate. Calcium oxalate/phosphate stone samples were weighed, laser procedure times measured, and ablation rates calculated for ball tip fibers, with comparison to bare tip fibers. Photographs of ball tips were taken before and after each procedure to observe ball tip degradation and determine number of procedures completed before need to replace fiber. Saline irrigation rates and ureteroscope deflection were measured with and without TFL fiber present. There was no statistical difference (P > 0.05) between stone ablation rates for single-use ball tip fiber (1.3 +/- 0.4 mg/s) (n=10), multiple-use ball tip fiber (1.3 +/- 0.5 mg/s) (n=44), and conventional single-use bare tip fibers (1.3 +/- 0.2 mg/s) (n=10). Ball tip durability varied widely, but fibers averaged > 4 stone procedures before decline in stone ablation rates due to mechanical damage at front surface of ball tip. The small fiber diameter did not impact ureteroscope deflection or saline flow rates. The miniature ball tip fiber may provide a cost-effective design for safe fiber insertion through the ureteroscope working channel and the ureter without risk of scope damage or tissue perforation, and without compromising stone ablation efficiency during TFL ablation of kidney stones.

A Martian Telecommunications Network: UHF Relay Support of the Mars Exploration Rovers by the Mars Global Surveyor, Mars Odyssey, and Mars Express Orbiters

NASA Technical Reports Server (NTRS)

Edwards, Charles D., Jr.; Barbieri, A.; Brower, E.; Estabrook, P.; Gibbs, R.; Horttor, R.; Ludwinski, J.; Mase, R.; McCarthy, C.; Schmidt, R.;

Strain gradient drives shear banding in metallic glasses

NASA Astrophysics Data System (ADS)

Tian, Zhi-Li; Wang, Yun-Jiang; Chen, Yan; Dai, Lan-Hong

2017-09-01

Shear banding is a nucleation-controlled process in metallic glasses (MGs) involving multiple temporal-spatial scales, which hinders a concrete understanding of its structural origin down to the atomic scale. Here, inspired by the morphology of composite materials, we propose a different perspective of MGs as a hard particle-reinforced material based on atomic-scale structural heterogeneity. The local stable structures indicated by a high level of local fivefold symmetry (L5FS) act as hard "particles" which are embedded in the relatively soft matrix. We demonstrate this concept by performing atomistic simulations of shear banding in CuZr MG. A shear band is prone to form in a sample with a high degree of L5FS which is slowly quenched from the liquid. An atomic-scale analysis on strain and the structural evolution reveals that it is the strain gradient effect that has originated from structural heterogeneity that facilitates shear transformation zones (STZs) to mature shear bands. An artificial composite model with a high degree of strain gradient, generated by inserting hard MG strips into a soft MG matrix, demonstrates a great propensity for shear banding. It therefore confirms the critical role strain gradient plays in shear banding. The strain gradient effect on shear banding is further quantified with a continuum model and a mechanical instability analysis. These physical insights might highlight the strain gradient as the hidden driving force in transforming STZs into shear bands in MGs.

QUANTIFYING OBSERVATIONAL PROJECTION EFFECTS USING MOLECULAR CLOUD SIMULATIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beaumont, Christopher N.; Offner, Stella S.R.; Shetty, Rahul

2013-11-10

The physical properties of molecular clouds are often measured using spectral-line observations, which provide the only probes of the clouds' velocity structure. It is hard, though, to assess whether and to what extent intensity features in position-position-velocity (PPV) space correspond to 'real' density structures in position-position-position (PPP) space. In this paper, we create synthetic molecular cloud spectral-line maps of simulated molecular clouds, and present a new technique for measuring the reality of individual PPV structures. Using a dendrogram algorithm, we identify hierarchical structures in both PPP and PPV space. Our procedure projects density structures identified in PPP space into correspondingmore » intensity structures in PPV space and then measures the geometric overlap of the projected structures with structures identified from the synthetic observation. The fractional overlap between a PPP and PPV structure quantifies how well the synthetic observation recovers information about the three-dimensional structure. Applying this machinery to a set of synthetic observations of CO isotopes, we measure how well spectral-line measurements recover mass, size, velocity dispersion, and virial parameter for a simulated star-forming region. By disabling various steps of our analysis, we investigate how much opacity, chemistry, and gravity affect measurements of physical properties extracted from PPV cubes. For the simulations used here, which offer a decent, but not perfect, match to the properties of a star-forming region like Perseus, our results suggest that superposition induces a ∼40% uncertainty in masses, sizes, and velocity dispersions derived from {sup 13}CO (J = 1-0). As would be expected, superposition and confusion is worst in regions where the filling factor of emitting material is large. The virial parameter is most affected by superposition, such that estimates of the virial parameter derived from PPV and PPP information typically disagree by a factor of ∼2. This uncertainty makes it particularly difficult to judge whether gravitational or kinetic energy dominate a given region, since the majority of virial parameter measurements fall within a factor of two of the equipartition level α ∼ 2.« less

gWEGA: GPU-accelerated WEGA for molecular superposition and shape comparison.

PubMed

Yan, Xin; Li, Jiabo; Gu, Qiong; Xu, Jun

2014-06-05

Virtual screening of a large chemical library for drug lead identification requires searching/superimposing a large number of three-dimensional (3D) chemical structures. This article reports a graphic processing unit (GPU)-accelerated weighted Gaussian algorithm (gWEGA) that expedites shape or shape-feature similarity score-based virtual screening. With 86 GPU nodes (each node has one GPU card), gWEGA can screen 110 million conformations derived from an entire ZINC drug-like database with diverse antidiabetic agents as query structures within 2 s (i.e., screening more than 55 million conformations per second). The rapid screening speed was accomplished through the massive parallelization on multiple GPU nodes and rapid prescreening of 3D structures (based on their shape descriptors and pharmacophore feature compositions). Copyright © 2014 Wiley Periodicals, Inc.

A non-orthogonal decomposition of flows into discrete events

NASA Astrophysics Data System (ADS)

Boxx, Isaac; Lewalle, Jacques

1998-11-01

This work is based on the formula for the inverse Hermitian wavelet transform. A signal can be interpreted as a (non-unique) superposition of near-singular, partially overlapping events arising from Dirac functions and/or its derivatives combined with diffusion.( No dynamics implied: dimensionless diffusion is related to the definition of the analyzing wavelets.) These events correspond to local maxima of spectral energy density. We successfully fitted model events of various orders on a succession of fields, ranging from elementary signals to one-dimensional hot-wire traces. We document edge effects, event overlap and its implications on the algorithm. The interpretation of the discrete singularities as flow events (such as coherent structures) and the fundamental non-uniqueness of the decomposition are discussed. The dynamics of these events will be examined in the companion paper.

A multi-institutional study of independent calculation verification in inhomogeneous media using a simple and effective method of heterogeneity correction integrated with the Clarkson method.

PubMed

Jinno, Shunta; Tachibana, Hidenobu; Moriya, Shunsuke; Mizuno, Norifumi; Takahashi, Ryo; Kamima, Tatsuya; Ishibashi, Satoru; Sato, Masanori

2018-05-21

In inhomogeneous media, there is often a large systematic difference in the dose between the conventional Clarkson algorithm (C-Clarkson) for independent calculation verification and the superposition-based algorithms of treatment planning systems (TPSs). These treatment site-dependent differences increase the complexity of the radiotherapy planning secondary check. We developed a simple and effective method of heterogeneity correction integrated with the Clarkson algorithm (L-Clarkson) to account for the effects of heterogeneity in the lateral dimension, and performed a multi-institutional study to evaluate the effectiveness of the method. In the method, a 2D image reconstructed from computed tomography (CT) images is divided according to lines extending from the reference point to the edge of the multileaf collimator (MLC) or jaw collimator for each pie sector, and the radiological path length (RPL) of each line is calculated on the 2D image to obtain a tissue maximum ratio and phantom scatter factor, allowing the dose to be calculated. A total of 261 plans (1237 beams) for conventional breast and lung treatments and lung stereotactic body radiotherapy were collected from four institutions. Disagreements in dose between the on-site TPSs and a verification program using the C-Clarkson and L-Clarkson algorithms were compared. Systematic differences with the L-Clarkson method were within 1% for all sites, while the C-Clarkson method resulted in systematic differences of 1-5%. The L-Clarkson method showed smaller variations. This heterogeneity correction integrated with the Clarkson algorithm would provide a simple evaluation within the range of -5% to +5% for a radiotherapy plan secondary check.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kieselmann, J; Bartzsch, S; Oelfke, U

Purpose: Microbeam Radiation Therapy is a preclinical method in radiation oncology that modulates radiation fields on a micrometre scale. Dose calculation is challenging due to arising dose gradients and therapeutically important dose ranges. Monte Carlo (MC) simulations, often used as gold standard, are computationally expensive and hence too slow for the optimisation of treatment parameters in future clinical applications. On the other hand, conventional kernel based dose calculation leads to inaccurate results close to material interfaces. The purpose of this work is to overcome these inaccuracies while keeping computation times low. Methods: A point kernel superposition algorithm is modified tomore » account for tissue inhomogeneities. Instead of conventional ray tracing approaches, methods from differential geometry are applied and the space around the primary photon interaction is locally warped. The performance of this approach is compared to MC simulations and a simple convolution algorithm (CA) for two different phantoms and photon spectra. Results: While peak doses of all dose calculation methods agreed within less than 4% deviations, the proposed approach surpassed a simple convolution algorithm in accuracy by a factor of up to 3 in the scatter dose. In a treatment geometry similar to possible future clinical situations differences between Monte Carlo and the differential geometry algorithm were less than 3%. At the same time the calculation time did not exceed 15 minutes. Conclusion: With the developed method it was possible to improve the dose calculation based on the CA method with respect to accuracy especially at sharp tissue boundaries. While the calculation is more extensive than for the CA method and depends on field size, the typical calculation time for a 20×20 mm{sup 2} field on a 3.4 GHz and 8 GByte RAM processor remained below 15 minutes. Parallelisation and optimisation of the algorithm could lead to further significant calculation time reductions.« less

Percentage depth dose calculation accuracy of model based algorithms in high energy photon small fields through heterogeneous media and comparison with plastic scintillator dosimetry

PubMed Central

Mani, Ganesh Kadirampatti; Karunakaran, Kaviarasu

2016-01-01

Small fields smaller than 4×4 cm2 are used in stereotactic and conformal treatments where heterogeneity is normally present. Since dose calculation accuracy in both small fields and heterogeneity often involves more discrepancy, algorithms used by treatment planning systems (TPS) should be evaluated for achieving better treatment results. This report aims at evaluating accuracy of four model‐based algorithms, X‐ray Voxel Monte Carlo (XVMC) from Monaco, Superposition (SP) from CMS‐Xio, AcurosXB (AXB) and analytical anisotropic algorithm (AAA) from Eclipse are tested against the measurement. Measurements are done using Exradin W1 plastic scintillator in Solid Water phantom with heterogeneities like air, lung, bone, and aluminum, irradiated with 6 and 15 MV photons of square field size ranging from 1 to 4 cm2. Each heterogeneity is introduced individually at two different depths from depth‐of‐dose maximum (Dmax), one setup being nearer and another farther from the Dmax. The central axis percentage depth‐dose (CADD) curve for each setup is measured separately and compared with the TPS algorithm calculated for the same setup. The percentage normalized root mean squared deviation (%NRMSD) is calculated, which represents the whole CADD curve's deviation against the measured. It is found that for air and lung heterogeneity, for both 6 and 15 MV, all algorithms show maximum deviation for field size 1×1 cm2 and gradually reduce when field size increases, except for AAA. For aluminum and bone, all algorithms' deviations are less for 15 MV irrespective of setup. In all heterogeneity setups, 1×1 cm2 field showed maximum deviation, except in 6 MV bone setup. All algorithms in the study, irrespective of energy and field size, when any heterogeneity is nearer to Dmax, the dose deviation is higher compared to the same heterogeneity far from the Dmax. Also, all algorithms show maximum deviation in lower‐density materials compared to high‐density materials. PACS numbers: 87.53.Bn, 87.53.kn, 87.56.bd, 87.55.Kd, 87.56.jf PMID:26894345

SUPERPOSITION OF POLYTROPES IN THE INNER HELIOSHEATH

DOE Office of Scientific and Technical Information (OSTI.GOV)

Livadiotis, G., E-mail: glivadiotis@swri.edu

2016-03-15

This paper presents a possible generalization of the equation of state and Bernoulli's integral when a superposition of polytropic processes applies in space and astrophysical plasmas. The theory of polytropic thermodynamic processes for a fixed polytropic index is extended for a superposition of polytropic indices. In general, the superposition may be described by any distribution of polytropic indices, but emphasis is placed on a Gaussian distribution. The polytropic density–temperature relation has been used in numerous analyses of space plasma data. This linear relation on a log–log scale is now generalized to a concave-downward parabola that is able to describe themore » observations better. The model of the Gaussian superposition of polytropes is successfully applied in the proton plasma of the inner heliosheath. The estimated mean polytropic index is near zero, indicating the dominance of isobaric thermodynamic processes in the sheath, similar to other previously published analyses. By computing Bernoulli's integral and applying its conservation along the equator of the inner heliosheath, the magnetic field in the inner heliosheath is estimated, B ∼ 2.29 ± 0.16 μG. The constructed normalized histogram of the values of the magnetic field is similar to that derived from a different method that uses the concept of large-scale quantization, bringing incredible insights to this novel theory.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dubrovsky, V. G.; Topovsky, A. V.

New exact solutions, nonstationary and stationary, of Veselov-Novikov (VN) equation in the forms of simple nonlinear and linear superpositions of arbitrary number N of exact special solutions u{sup (n)}, n= 1, Horizontal-Ellipsis , N are constructed via Zakharov and Manakov {partial_derivative}-dressing method. Simple nonlinear superpositions are represented up to a constant by the sums of solutions u{sup (n)} and calculated by {partial_derivative}-dressing on nonzero energy level of the first auxiliary linear problem, i.e., 2D stationary Schroedinger equation. It is remarkable that in the zero energy limit simple nonlinear superpositions convert to linear ones in the form of the sums ofmore » special solutions u{sup (n)}. It is shown that the sums u=u{sup (k{sub 1})}+...+u{sup (k{sub m})}, 1 Less-Than-Or-Slanted-Equal-To k{sub 1} < k{sub 2} < Horizontal-Ellipsis < k{sub m} Less-Than-Or-Slanted-Equal-To N of arbitrary subsets of these solutions are also exact solutions of VN equation. The presented exact solutions include as superpositions of special line solitons and also superpositions of plane wave type singular periodic solutions. By construction these exact solutions represent also new exact transparent potentials of 2D stationary Schroedinger equation and can serve as model potentials for electrons in planar structures of modern electronics.« less

Superposition of Polytropes in the Inner Heliosheath

NASA Astrophysics Data System (ADS)

Livadiotis, G.

2016-03-01

This paper presents a possible generalization of the equation of state and Bernoulli's integral when a superposition of polytropic processes applies in space and astrophysical plasmas. The theory of polytropic thermodynamic processes for a fixed polytropic index is extended for a superposition of polytropic indices. In general, the superposition may be described by any distribution of polytropic indices, but emphasis is placed on a Gaussian distribution. The polytropic density-temperature relation has been used in numerous analyses of space plasma data. This linear relation on a log-log scale is now generalized to a concave-downward parabola that is able to describe the observations better. The model of the Gaussian superposition of polytropes is successfully applied in the proton plasma of the inner heliosheath. The estimated mean polytropic index is near zero, indicating the dominance of isobaric thermodynamic processes in the sheath, similar to other previously published analyses. By computing Bernoulli's integral and applying its conservation along the equator of the inner heliosheath, the magnetic field in the inner heliosheath is estimated, B ˜ 2.29 ± 0.16 μG. The constructed normalized histogram of the values of the magnetic field is similar to that derived from a different method that uses the concept of large-scale quantization, bringing incredible insights to this novel theory.

Limited data tomographic image reconstruction via dual formulation of total variation minimization

NASA Astrophysics Data System (ADS)

Jang, Kwang Eun; Sung, Younghun; Lee, Kangeui; Lee, Jongha; Cho, Seungryong

2011-03-01

The X-ray mammography is the primary imaging modality for breast cancer screening. For the dense breast, however, the mammogram is usually difficult to read due to tissue overlap problem caused by the superposition of normal tissues. The digital breast tomosynthesis (DBT) that measures several low dose projections over a limited angle range may be an alternative modality for breast imaging, since it allows the visualization of the cross-sectional information of breast. The DBT, however, may suffer from the aliasing artifact and the severe noise corruption. To overcome these problems, a total variation (TV) regularized statistical reconstruction algorithm is presented. Inspired by the dual formulation of TV minimization in denoising and deblurring problems, we derived a gradient-type algorithm based on statistical model of X-ray tomography. The objective function is comprised of a data fidelity term derived from the statistical model and a TV regularization term. The gradient of the objective function can be easily calculated using simple operations in terms of auxiliary variables. After a descending step, the data fidelity term is renewed in each iteration. Since the proposed algorithm can be implemented without sophisticated operations such as matrix inverse, it provides an efficient way to include the TV regularization in the statistical reconstruction method, which results in a fast and robust estimation for low dose projections over the limited angle range. Initial tests with an experimental DBT system confirmed our finding.

Dosimetric verification of radiation therapy including intensity modulated treatments, using an amorphous-silicon electronic portal imaging device

NASA Astrophysics Data System (ADS)

Chytyk-Praznik, Krista Joy

Radiation therapy is continuously increasing in complexity due to technological innovation in delivery techniques, necessitating thorough dosimetric verification. Comparing accurately predicted portal dose images to measured images obtained during patient treatment can determine if a particular treatment was delivered correctly. The goal of this thesis was to create a method to predict portal dose images that was versatile and accurate enough to use in a clinical setting. All measured images in this work were obtained with an amorphous silicon electronic portal imaging device (a-Si EPID), but the technique is applicable to any planar imager. A detailed, physics-motivated fluence model was developed to characterize fluence exiting the linear accelerator head. The model was further refined using results from Monte Carlo simulations and schematics of the linear accelerator. The fluence incident on the EPID was converted to a portal dose image through a superposition of Monte Carlo-generated, monoenergetic dose kernels specific to the a-Si EPID. Predictions of clinical IMRT fields with no patient present agreed with measured portal dose images within 3% and 3 mm. The dose kernels were applied ignoring the geometrically divergent nature of incident fluence on the EPID. A computational investigation into this parallel dose kernel assumption determined its validity under clinically relevant situations. Introducing a patient or phantom into the beam required the portal image prediction algorithm to account for patient scatter and attenuation. Primary fluence was calculated by attenuating raylines cast through the patient CT dataset, while scatter fluence was determined through the superposition of pre-calculated scatter fluence kernels. Total dose in the EPID was calculated by convolving the total predicted incident fluence with the EPID-specific dose kernels. The algorithm was tested on water slabs with square fields, agreeing with measurement within 3% and 3 mm. The method was then applied to five prostate and six head-and-neck IMRT treatment courses (˜1900 clinical images). Deviations between the predicted and measured images were quantified. The portal dose image prediction model developed in this thesis work has been shown to be accurate, and it was demonstrated to be able to verify patients' delivered radiation treatments.

Improved Data Analysis Tools for the Thermal Emission Spectrometer

NASA Astrophysics Data System (ADS)

Rodriguez, K.; Laura, J.; Fergason, R.; Bogle, R.

2017-06-01

We plan to stand up three different database systems for testing of a new datastore for MGS TES data allowing for more accessible tools supporting high throughput data analysis on the high-dimensionality hyperspectral data set.

Ripple Trap

NASA Image and Video Library

2006-04-03

This Mars Global Surveyor MGS Mars Orbiter Camera MOC image shows the margin of a lava flow on a cratered plain in the Athabasca Vallis region of Mars. Remarkably, the cratered plain in this scene is essentially free of bright, windblown ripples

Polygons near Lyot Crater

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-564, 4 December 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows patterned ground, arranged in the form of polygons, on the undulating plains associated with ejecta from the Lyot impact crater on the martian northern plains. This picture was acquired in October 2003 and shows that the polygon margins are ridges with large boulders--shown here as dark dots--on them. On Earth, polygon patterns like this are created in arctic and antarctic regions where there is ice in the ground. The seasonal and longer-term cycles of freezing and thawing of the ice-rich ground cause these features to form over time. Whether the same is true for Mars is unknown. The polygons are located near 54.6oN, 326.6oW. The image covers an area 3 km (1.9 mi) wide and is illuminated from the lower left.

Marte Vallis Platy Flows

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-442, 4 August 2003

The Marte Vallis system, located east of Cerberus and west of Amazonis Planitia, is known for its array of broken, platy flow features. This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a close-up view of some of these plates; they appear to be like puzzle pieces that have been broken apart and moved away from each other. The Mars science community has been discussing these features for the past several years--either the flows in Marte Vallis are lava flows, or mud flows. In either case, the material was very fluid and had a thin crust on its surface. As the material continued to flow through the valley system, the crust broke up into smaller plates that were then rafted some distance down the valley. This picture is located near 6.9oN, 182.8oW. It is illuminated by sunlight from the left.

Landslide in Kasei Valles

NASA Technical Reports Server (NTRS)

2003-01-01

The Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) continues in 2003 to return excellent, high resolution images of the red planet's surface. This nearly 1.5 meters (5 ft.) per pixel view of a landslide on a 200 meter-high (219 yards-high) slope in Kasei Valles was specifically targeted for scientific investigation by rotating the MGS spacecraft about 7.8o off-nadir in January 2003. The scar left by the landslide reveals layers in the bedrock at the top the slope and shows a plethora of dark-toned, house-sized boulders that rolled down the slope and collected at the base of the landslide scar. A few meteor impact craters have formed on the landslide deposit and within the scar, indicating that this landslide occurred a very long time ago. Sunlight illuminates this scene from the left/lower left; the landslide is located near 28.3oN, 71.9oW.

Dust Mantle Near Pavonis Mons

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-356, 10 May 2003

This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a thick mantle of dust covering lava flows north of Pavonis Mons so well that the flows are no longer visible. Flows are known to occur here because of the proximity to the volcano, and such flows normally have a very rugged surface. Fine dust, however, has settled out of the atmosphere over time and obscured the flows from view. The cliff at the top of the image faces north (up), the cliff in the middle of the image faces south (down), and the rugged slope at the bottom of the image faces north (up). The dark streak at the center-left was probably caused by an avalanche of dust sometime in the past few decades. The image is located near 4.1oN, 111.3oW. Sunlight illuminates the scene from the right/lower right.

Seasonal variations of snow depth on Mars.

PubMed

Smith, D E; Zuber, M T; Neumann, G A

2001-12-07

Using topography collected over one martian year from the Mars Orbiter Laser Altimeter on the Mars Global Surveyor (MGS) spacecraft, we have measured temporal changes in the elevation of the martian surface that correlate with the seasonal cycle of carbon dioxide exchange between the surface and atmosphere. The greatest elevation change (1.5 to 2 meters) occurs at high latitudes ( above 80 degrees ), whereas the bulk of the mass exchange occurs at lower latitudes (below 75 degrees N and below 73 degrees S). An unexpected period of sublimation was observed during northern hemisphere autumn, coincident with dust storms in the southern hemisphere. Analysis of MGS Doppler tracking residuals revealed temporal variations in the flattening of Mars that correlate with elevation changes. The combined changes in gravity and elevation constrain the average density of seasonally deposited carbon dioxide to be 910 +/- 230 kilograms per cubic meter, which is considerably denser than terrestrial snow.

Argyre Dust Devil Tracks

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-363, 17 May 2003

This summertime Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) view of the floor of Argyre Basin shows a plethora of dark streaks thought to have been created by the passage of dust devils. Dust devils are vortices of wind--just as a tornado is a vortex of wind associated with stormy weather on Earth, and the spiraling of water down a bathtub drain is a vortex in a liquid. Dust devils usually form on Mars on relatively calm, quiet, spring and summer afternoons. The passage of a dust devil picks up and disturbs the thin coatings of dust on the martian surface, forming streaks that mark the path that the moving dust devil took. This picture covers an area 3 km (1.9 mi) wide and is located near 48.5oS, 43.0oW. Sunlight illuminates the scene from the upper left.

Theoretical study of the alkali and alkaline-earth monosulfides

NASA Technical Reports Server (NTRS)

Partridge, Harry; Langhoff, Stephen R.; Bauschlicher, Charles W., Jr.

1988-01-01

Ab initio calculations have been used to obtain accurate spectroscopic constants for the X2Pi and A2Sigma(+) states of the alkali sulfides and the X1Sigma(+), a3Pi, and A1Pi states of the alkaline-earth sulfides. In contrast to the alkali oxides, the alkali sulfides are found to have X2Pi ground states, due to the larger electrostatic interaction. Dissociation energies of 3.27 eV for BeS, 2.32 eV for MgS, 3.29 eV for CaS, and 3.41 eV for SrS have been obtained for the X1Sigma(+) states of the alkaline-earth sulfides, in good agreement with experimental results. Core correlation is shown to increase the Te values for the a3Pi and A1Pi states of MgS, CaS, and SrS.

Spiders from Mars?

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-426, 19 July 2003

No, this is not a picture of a giant, martian spider web. This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a plethora of polygonal features on the floor of a northern hemisphere impact crater near 65.6oN, 327.7oW. The picture was acquired during spring, after the seasonal carbon dioxide frost cap had largely migrated through the region. At the time the picture was taken, remnants of seasonal frost remained on the crater rim and on the edges of the troughs that bound each of the polygons. Frost often provides a helpful hint as to where polygons and patterned ground occur. The polygons, if they were on Earth, would indicate the presence of freeze-thaw cycles in ground ice. Although uncertain, the same might be true of Mars. Sunlight illuminates the scene from the lower left.

Two new modified Gauss-Seidel methods for linear system with M-matrices

NASA Astrophysics Data System (ADS)

Zheng, Bing; Miao, Shu-Xin

2009-12-01

In 2002, H. Kotakemori et al. proposed the modified Gauss-Seidel (MGS) method for solving the linear system with the preconditioner [H. Kotakemori, K. Harada, M. Morimoto, H. Niki, A comparison theorem for the iterative method with the preconditioner () J. Comput. Appl. Math. 145 (2002) 373-378]. Since this preconditioner is constructed by only the largest element on each row of the upper triangular part of the coefficient matrix, the preconditioning effect is not observed on the nth row. In the present paper, to deal with this drawback, we propose two new preconditioners. The convergence and comparison theorems of the modified Gauss-Seidel methods with these two preconditioners for solving the linear system are established. The convergence rates of the new proposed preconditioned methods are compared. In addition, numerical experiments are used to show the effectiveness of the new MGS methods.

Universal structural parameter to quantitatively predict metallic glass properties

DOE PAGES

Ding, Jun; Cheng, Yong-Qiang; Sheng, Howard; ...

2016-12-12

Quantitatively correlating the amorphous structure in metallic glasses (MGs) with their physical properties has been a long-sought goal. Here we introduce flexibility volume' as a universal indicator, to bridge the structural state the MG is in with its properties, on both atomic and macroscopic levels. The flexibility volume combines static atomic volume with dynamics information via atomic vibrations that probe local configurational space and interaction between neighbouring atoms. We demonstrate that flexibility volume is a physically appropriate parameter that can quantitatively predict the shear modulus, which is at the heart of many key properties of MGs. Moreover, the new parametermore » correlates strongly with atomic packing topology, and also with the activation energy for thermally activated relaxation and the propensity for stress-driven shear transformations. These correlations are expected to be robust across a very wide range of MG compositions, processing conditions and length scales.« less

Engineering of Klebsiella oxytoca for production of 2,3-butanediol via simultaneous utilization of sugars from a Golenkinia sp. hydrolysate.

PubMed

Park, Jong Hyun; Choi, Min Ah; Kim, Yong Jae; Kim, Yeu-Chun; Chang, Yong Keun; Jeong, Ki Jun

2017-12-01

The Klebsiella oxytoca was engineered to produce 2,3-butanediol (2,3-BDO) simultaneously utilizing glucose and galactose obtained from a Golenkinia sp. hydrolysate. For efficient uptake of galactose at a high concentration of glucose, Escherichia coli galactose permease (GalP) was introduced, and the expression of galP under a weak-strength promoter resulted in simultaneous consumption of galactose and glucose. Next, to improve the sugar consumption, a gene encoding methylglyoxal synthase (MgsA) known as an inhibitor of multisugar metabolism was deleted, and the mgsA-null mutant showed much faster consumption of both sugars than the wild-type strain did. Finally, we demonstrated that the engineered K. oxytoca could utilize sugar extracts from a Golenkinia sp. hydrolysate and successfully produces 2,3-BDO. Copyright © 2017 Elsevier Ltd. All rights reserved.

Frosty Wind Streaks

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-532, 2 November 2003

As seasonal polar frosts sublime away each spring, winds may re-distribute some of the frost or move sediment exposed from beneath the frost. This action creates ephemeral wind streaks that can be used by scientists seeking to study the local circulation of the martian [missing text] surveyor (MGS) Mars Orbiter Camera (MOC) image shows a suite of wind streaks created in subliming carbon dioxide frost. These dark streaks appear to conform to the shape of the slopes on which they occur, suggesting that slope winds play a dominant role in creating and orienting these streaks. This picture is located near 73.8oS, 305.7oW. The image is illuminated by sunlight from the upper left and covers an area 3 km (1.9 mi) wide. Winds responsible for the streaks generally blew from the bottom/right (south/southeast) toward the top/upper left (north/northwest).

Boulder Track

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-408, 1 July 2003

If a boulder rolls down a slope on an uninhabited planet, does it make a sound? While we do not know the sound made by a boulder rolling down a slope in the martian region of Gordii Dorsum, we do know that it made an impression. This full-resolution Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows a series of depressions made on a dust-mantled slope as a boulder rolled down it, sometime in the recent past. The boulder track is located just right of center in this picture. The boulder sits at the end of the track. This picture was acquired in May 2003; it is located near 11.2oN, 147.8oW. North is toward the lower left, sunlight illuminates the scene from the right. The picture covers an area only 810 meters (about 886 yards) across.

Volcano Near Pavonis Mons

NASA Technical Reports Server (NTRS)

2003-01-01

MGS MOC Release No. MOC2-549, 19 November 2003

The volcanic plains to the east, southeast, and south of the giant Tharsis volcano, Pavonis Mons, are dotted by dozens of small volcanoes. This Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) image shows an example located near 2.1oS, 109.1oW. The elongate depression in the lower left (southwest) quarter of the image is the collapsed vent area for this small, unnamed volcano. A slightly sinuous, leveed channel runs from the depression toward the upper right (north-northeast); this is the trace of a collapsed lava tube. The entire scene has been mantled by dust, such that none of the original volcanic rocks are exposed--except minor occurrences on the steepest slopes in the vent area. The scene is 3 km (1.9 mi) wide and illuminated by sunlight from the left/upper left.

Implications of MOLA Global Roughness, Statistics, and Topography

NASA Technical Reports Server (NTRS)

Aharonson, O.; Zuber, M. T.; Neumann, G. A.

1999-01-01

New insights are emerging as the ongoing high-quality measurements of the Martian surface topography by Mars Orbiter Laser Altimeter (MOLA) on board the Mars Global Surveyor (MGS) spacecraft increase in coverage, resolution, and diversity. For the first time, a global characterization of the statistical properties of topography is possible. The data were collected during the aerobreaking hiatus, science phasing, and mapping orbits of MGS, and have a resolution of 300-400 m along track, a range resolution of 37.5 cm, a range precision of 1-10 m for surface slopes up to 30 deg., and an absolute accuracy of topography of 13 m. The spacecraft's orbit inclination dictates that nadir observations have latitude coverage of about 87.1S to 87.1N; the addition of observations obtained during a period of off-nadir pointing over the north pole extended coverage to 90N. Additional information is contained in the original extended abstract.

The Quantum Measurement Problem and Physical reality: A Computation Theoretic Perspective

NASA Astrophysics Data System (ADS)

Srikanth, R.

2006-11-01

Is the universe computable? If yes, is it computationally a polynomial place? In standard quantum mechanics, which permits infinite parallelism and the infinitely precise specification of states, a negative answer to both questions is not ruled out. On the other hand, empirical evidence suggests that NP-complete problems are intractable in the physical world. Likewise, computational problems known to be algorithmically uncomputable do not seem to be computable by any physical means. We suggest that this close correspondence between the efficiency and power of abstract algorithms on the one hand, and physical computers on the other, finds a natural explanation if the universe is assumed to be algorithmic; that is, that physical reality is the product of discrete sub-physical information processing equivalent to the actions of a probabilistic Turing machine. This assumption can be reconciled with the observed exponentiality of quantum systems at microscopic scales, and the consequent possibility of implementing Shor's quantum polynomial time algorithm at that scale, provided the degree of superposition is intrinsically, finitely upper-bounded. If this bound is associated with the quantum-classical divide (the Heisenberg cut), a natural resolution to the quantum measurement problem arises. From this viewpoint, macroscopic classicality is an evidence that the universe is in BPP, and both questions raised above receive affirmative answers. A recently proposed computational model of quantum measurement, which relates the Heisenberg cut to the discreteness of Hilbert space, is briefly discussed. A connection to quantum gravity is noted. Our results are compatible with the philosophy that mathematical truths are independent of the laws of physics.

Fast 3D dosimetric verifications based on an electronic portal imaging device using a GPU calculation engine.

PubMed

Zhu, Jinhan; Chen, Lixin; Chen, Along; Luo, Guangwen; Deng, Xiaowu; Liu, Xiaowei

2015-04-11

To use a graphic processing unit (GPU) calculation engine to implement a fast 3D pre-treatment dosimetric verification procedure based on an electronic portal imaging device (EPID). The GPU algorithm includes the deconvolution and convolution method for the fluence-map calculations, the collapsed-cone convolution/superposition (CCCS) algorithm for the 3D dose calculations and the 3D gamma evaluation calculations. The results of the GPU-based CCCS algorithm were compared to those of Monte Carlo simulations. The planned and EPID-based reconstructed dose distributions in overridden-to-water phantoms and the original patients were compared for 6 MV and 10 MV photon beams in intensity-modulated radiation therapy (IMRT) treatment plans based on dose differences and gamma analysis. The total single-field dose computation time was less than 8 s, and the gamma evaluation for a 0.1-cm grid resolution was completed in approximately 1 s. The results of the GPU-based CCCS algorithm exhibited good agreement with those of the Monte Carlo simulations. The gamma analysis indicated good agreement between the planned and reconstructed dose distributions for the treatment plans. For the target volume, the differences in the mean dose were less than 1.8%, and the differences in the maximum dose were less than 2.5%. For the critical organs, minor differences were observed between the reconstructed and planned doses. The GPU calculation engine was used to boost the speed of 3D dose and gamma evaluation calculations, thus offering the possibility of true real-time 3D dosimetric verification.

Using Musical Intervals to Demonstrate Superposition of Waves and Fourier Analysis

ERIC Educational Resources Information Center

LoPresto, Michael C.

2013-01-01

What follows is a description of a demonstration of superposition of waves and Fourier analysis using a set of four tuning forks mounted on resonance boxes and oscilloscope software to create, capture and analyze the waveforms and Fourier spectra of musical intervals.

Aerodynamic Analysis of the Truss-Braced Wing Aircraft Using Vortex-Lattice Superposition Approach

NASA Technical Reports Server (NTRS)

Ting, Eric Bi-Wen; Reynolds, Kevin Wayne; Nguyen, Nhan T.; Totah, Joseph J.

2014-01-01

The SUGAR Truss-BracedWing (TBW) aircraft concept is a Boeing-developed N+3 aircraft configuration funded by NASA ARMD FixedWing Project. This future generation transport aircraft concept is designed to be aerodynamically efficient by employing a high aspect ratio wing design. The aspect ratio of the TBW is on the order of 14 which is significantly greater than those of current generation transport aircraft. This paper presents a recent aerodynamic analysis of the TBW aircraft using a conceptual vortex-lattice aerodynamic tool VORLAX and an aerodynamic superposition approach. Based on the underlying linear potential flow theory, the principle of aerodynamic superposition is leveraged to deal with the complex aerodynamic configuration of the TBW. By decomposing the full configuration of the TBW into individual aerodynamic lifting components, the total aerodynamic characteristics of the full configuration can be estimated from the contributions of the individual components. The aerodynamic superposition approach shows excellent agreement with CFD results computed by FUN3D, USM3D, and STAR-CCM+.

Superposition-Based Analysis of First-Order Probabilistic Timed Automata

NASA Astrophysics Data System (ADS)

Fietzke, Arnaud; Hermanns, Holger; Weidenbach, Christoph

This paper discusses the analysis of first-order probabilistic timed automata (FPTA) by a combination of hierarchic first-order superposition-based theorem proving and probabilistic model checking. We develop the overall semantics of FPTAs and prove soundness and completeness of our method for reachability properties. Basically, we decompose FPTAs into their time plus first-order logic aspects on the one hand, and their probabilistic aspects on the other hand. Then we exploit the time plus first-order behavior by hierarchic superposition over linear arithmetic. The result of this analysis is the basis for the construction of a reachability equivalent (to the original FPTA) probabilistic timed automaton to which probabilistic model checking is finally applied. The hierarchic superposition calculus required for the analysis is sound and complete on the first-order formulas generated from FPTAs. It even works well in practice. We illustrate the potential behind it with a real-life DHCP protocol example, which we analyze by means of tool chain support.

On the sighted ancestry of blindness - exceptionally preserved eyes of Mesozoic polychelidan lobsters.

PubMed

Audo, Denis; Haug, Joachim T; Haug, Carolin; Charbonnier, Sylvain; Schweigert, Günter; Müller, Carsten H G; Harzsch, Steffen

2016-01-01

Modern representatives of Polychelida (Polychelidae) are considered to be entirely blind and have largely reduced eyes, possibly as an adaptation to deep-sea environments. Fossil species of Polychelida, however, appear to have well-developed compound eyes preserved as anterior bulges with distinct sculpturation. We documented the shapes and sizes of eyes and ommatidia based upon exceptionally preserved fossil polychelidans from Binton (Hettangian, United-Kingdom), Osteno (Sinemurian, Italy), Posidonia Shale (Toarcian, Germany), La Voulte-sur-Rhône (Callovian, France), and Solnhofen-type plattenkalks (Kimmeridgian-Tithonian, Germany). For purposes of comparison, sizes of the eyes of several other polychelidans without preserved ommatidia were documented. Sizes of ommatidia and eyes were statistically compared against carapace length, taxonomic group, and outcrop. Nine species possess eyes with square facets; Rosenfeldia oppeli (Woodward, 1866), however, displays hexagonal facets. The sizes of eyes and ommatidia are a function of carapace length. No significant differences were discerned between polychelidans from different outcrops; Eryonidae, however, have significantly smaller eyes than other groups. Fossil eyes bearing square facets are similar to the reflective superposition eyes found in many extant decapods. As such, they are the earliest example of superposition eyes. As reflective superposition is considered plesiomorphic for Reptantia, this optic type was probably retained in Polychelida. The two smallest specimens, a Palaeopentacheles roettenbacheri (Münster, 1839) and a Hellerocaris falloti (Van Straelen, 1923), are interpreted as juveniles. Both possess square-shaped facets, a typical post-larval feature. The eye morphology of these small specimens, which are far smaller than many extant eryoneicus larvae, suggests that Jurassic polychelidans did not develop via giant eryoneicus larvae. In contrast, another species we examined, Rosenfeldia oppeli (Woodward, 1866), did not possess square-shaped facets, but rather hexagonal ones, which suggests that this species did not possess reflective superposition eyes. The hexagonal facets may indicate either another type of superposition eye (refractive or parabolic superposition), or an apposition eye. As decapod larvae possess apposition eyes with hexagonal facets, it is most parsimonious to consider eyes of R. oppeli as apposition eyes evolved through paedomorphic heterochrony. Polychelidan probably originally had reflective superposition. R. oppeli, however, probably gained apposition eyes through paedomorphosis.

Aeroheating Thermal Model Correlation for Mars Global Surveyor (MGS) Solar Array

NASA Technical Reports Server (NTRS)

Amundsen, Ruth M.; Dec, John A.; George, Benjamin E.

2003-01-01

The Mars Global Surveyor (MGS) Spacecraft made use of aerobraking to gradually reduce its orbit period from a highly elliptical insertion orbit to its final science orbit. Aerobraking produces a high heat load on the solar arrays, which have a large surface area exposed to the airflow and relatively low mass. To accurately model the complex behavior during aerobraking, the thermal analysis needed to be tightly coupled to the spatially varying, time dependent aerodynamic heating. Also, the thermal model itself needed to accurately capture the behavior of the solar array and its response to changing heat load conditions. The correlation of the thermal model to flight data allowed a validation of the modeling process, as well as information on what processes dominate the thermal behavior. Correlation in this case primarily involved detailing the thermal sensor nodes, using as-built mass to modify material property estimates, refining solar cell assembly properties, and adding detail to radiation and heat flux boundary conditions. This paper describes the methods used to develop finite element thermal models of the MGS solar array and the correlation of the thermal model to flight data from the spacecraft drag passes. Correlation was made to data from four flight thermal sensors over three of the early drag passes. Good correlation of the model was achieved, with a maximum difference between the predicted model maximum and the observed flight maximum temperature of less than 5%. Lessons learned in the correlation of this model assisted in validating a similar model and method used for the Mars Odyssey solar array aeroheating analysis, which were used during onorbit operations.

Influence of the Interplanetary Convective Electric Field on the Distribution of Heavy Pickup Ions Around Mars

NASA Astrophysics Data System (ADS)

Johnson, B. C.; Liemohn, M. W.; Fränz, M.; Ramstad, R.; Stenberg Wieser, G.; Nilsson, H.

2018-01-01

This study obtains a statistical representation of 2-15 keV heavy ions outside of the Martian-induced magnetosphere and depicts their organization by the solar wind convective electric field (ESW). The overlap in the lifetime of Mars Global Surveyor (MGS) and Mars Express (MEX) provides a period of nearly three years during which magnetometer data from MGS can be used to estimate the direction of ESW in order to better interpret MEX ion data. In this paper we use MGS estimates of ESW to express MEX ion measurements in Mars-Sun-Electric field (MSE) coordinates. A new methodological technique used in this study is the limitation of the analysis to a particular instrument mode for which the overlap between proton contamination and plume observations is rare. This allows for confident energetic heavy ion identification outside the induced magnetosphere boundary. On the dayside, we observe high count rates of 2-15 keV heavy ions more frequently in the +ESW hemisphere (+ZMSE) than in the -ESW hemisphere, but on the nightside the reverse asymmetry was found. The results are consistent with planetary origin ions being picked up by the solar wind convective electric field. Though a field of view hole hinders quantification of plume fluxes and velocity space, this new energetic heavy ion identification technique means that Mars Express should prove useful in expanding the time period available to assess general plume loss variation with drivers.

Summary, synthesis, and significance: Chapter 6

USGS Publications Warehouse

Esque, Todd C.; Nussear, Kenneth E.; Inman, Richard D.; Matocq, Marjorie D.; Weisberg, Peter J.; Dilts, Thomas E.; Leitner, Phillip

2013-01-01

The initial habitat suitability model estimates pre‐European suitable habitat of the Mohave ground squirrel (MGS, Xerospermophilus mohavensis) covering 19,023 km2. Impact scenarios predicted that between 10 percent and 16 percent of suitable habitat has been lost to historical human disturbances, and up to an additional 10 percent may be affected by renewable energy development in the near future. These figures are the result of analyses conducted solely on public lands. State and private lands in the region also have pending proposals for renewable energy on 260 km2, and an additional 3,500 km2 may be available for renewable energy. The sum of potential habitat disturbance on public, State, and private lands could equal up to a quarter of historic suitable habitat from pre‐European settlement levels.   While the analyses conducted here consider direct impacts from the footprint of renewable energy and associated transmission corridors, there are many indirect sources of environmental disturbance related to renewable energy development (Lovich and Ennen 2011). Some of those potentially important to the MGS include: increased fugitive dust and the release of chemicals such as dust suppressants, insulating fluids, and herbicides throughout the operational life of facilities, auditory interference from the sound and vibrations of turbines, increases in predators and invasive species that further alter system processes, and changes in surface flow of water that also influence vegetation that is important in these habitats. However, there is little research in the broader context of these topics for the Mojave Desert ecosystem, and less, if any, about the MGS.  

Towards Stochastic Optimization-Based Electric Vehicle Penetration in a Novel Archipelago Microgrid.

PubMed

Yang, Qingyu; An, Dou; Yu, Wei; Tan, Zhengan; Yang, Xinyu

2016-06-17

Due to the advantage of avoiding upstream disturbance and voltage fluctuation from a power transmission system, Islanded Micro-Grids (IMG) have attracted much attention. In this paper, we first propose a novel self-sufficient Cyber-Physical System (CPS) supported by Internet of Things (IoT) techniques, namely "archipelago micro-grid (MG)", which integrates the power grid and sensor networks to make the grid operation effective and is comprised of multiple MGs while disconnected with the utility grid. The Electric Vehicles (EVs) are used to replace a portion of Conventional Vehicles (CVs) to reduce CO 2 emission and operation cost. Nonetheless, the intermittent nature and uncertainty of Renewable Energy Sources (RESs) remain a challenging issue in managing energy resources in the system. To address these issues, we formalize the optimal EV penetration problem as a two-stage Stochastic Optimal Penetration (SOP) model, which aims to minimize the emission and operation cost in the system. Uncertainties coming from RESs (e.g., wind, solar, and load demand) are considered in the stochastic model and random parameters to represent those uncertainties are captured by the Monte Carlo-based method. To enable the reasonable deployment of EVs in each MGs, we develop two scheduling schemes, namely Unlimited Coordinated Scheme (UCS) and Limited Coordinated Scheme (LCS), respectively. An extensive simulation study based on a modified 9 bus system with three MGs has been carried out to show the effectiveness of our proposed schemes. The evaluation data indicates that our proposed strategy can reduce both the environmental pollution created by CO 2 emissions and operation costs in UCS and LCS.

Towards Stochastic Optimization-Based Electric Vehicle Penetration in a Novel Archipelago Microgrid

PubMed Central

Yang, Qingyu; An, Dou; Yu, Wei; Tan, Zhengan; Yang, Xinyu

2016-01-01

Due to the advantage of avoiding upstream disturbance and voltage fluctuation from a power transmission system, Islanded Micro-Grids (IMG) have attracted much attention. In this paper, we first propose a novel self-sufficient Cyber-Physical System (CPS) supported by Internet of Things (IoT) techniques, namely “archipelago micro-grid (MG)”, which integrates the power grid and sensor networks to make the grid operation effective and is comprised of multiple MGs while disconnected with the utility grid. The Electric Vehicles (EVs) are used to replace a portion of Conventional Vehicles (CVs) to reduce CO2 emission and operation cost. Nonetheless, the intermittent nature and uncertainty of Renewable Energy Sources (RESs) remain a challenging issue in managing energy resources in the system. To address these issues, we formalize the optimal EV penetration problem as a two-stage Stochastic Optimal Penetration (SOP) model, which aims to minimize the emission and operation cost in the system. Uncertainties coming from RESs (e.g., wind, solar, and load demand) are considered in the stochastic model and random parameters to represent those uncertainties are captured by the Monte Carlo-based method. To enable the reasonable deployment of EVs in each MGs, we develop two scheduling schemes, namely Unlimited Coordinated Scheme (UCS) and Limited Coordinated Scheme (LCS), respectively. An extensive simulation study based on a modified 9 bus system with three MGs has been carried out to show the effectiveness of our proposed schemes. The evaluation data indicates that our proposed strategy can reduce both the environmental pollution created by CO2 emissions and operation costs in UCS and LCS. PMID:27322281

Real-time, high-resolution study of nanocrystallization and fatigue cracking in a cyclically strained metallic glass.

PubMed

Wang, Cheng-Cai; Mao, Yun-Wei; Shan, Zhi-Wei; Dao, Ming; Li, Ju; Sun, Jun; Ma, Evan; Suresh, Subra

2013-12-03

Metallic glasses (MGs) exhibit greater elastic limit and stronger resistance to plastic deformation than their crystalline metal counterparts. Their capacity to withstand plastic straining is further enhanced at submicrometer length scales. For a range of microelectromechanical applications, the resistance of MGs to damage and cracking from thermal and mechanical stress or strain cycling under partial or complete constraint is of considerable scientific and technological interest. However, to our knowledge, no real-time, high-resolution transmission electron microscopy observations are available of crystallization, damage, and failure from the controlled imposition of cyclic strains or displacements in any metallic glass. Here we present the results of a unique in situ study, inside a high-resolution transmission electron microscope, of glass-to-crystal formation and fatigue of an Al-based MG. We demonstrate that cyclic straining progressively leads to nanoscale surface roughening in the highly deformed region of the starter notch, causing crack nucleation and formation of nanocrystals. The growth of these nanograins during cyclic straining impedes subsequent crack growth by bridging the crack. In distinct contrast to this fatigue behavior, only distributed nucleation of smaller nanocrystals is observed with no surface roughening under monotonic deformation. We further show through molecular dynamics simulation that these findings can be rationalized by the accumulation of strain-induced nonaffine atomic rearrangements that effectively enhances diffusion through random walk during repeated strain cycling. The present results thus provide unique insights into fundamental mechanisms of fatigue of MGs that would help shape strategies for material design and engineering applications.

Effects of Gravity, Microgravity or Microgravity Simulation on Early Mammalian Development.

PubMed

Ruden, Douglas M; Bolnick, Alan; Awonuga, Awoniyi; Abdulhasan, Mohammed; Perez, Gloria; Puscheck, Elizabeth E; Rappolee, Daniel A

2018-06-11

Plant and animal life forms evolved mechanisms for sensing and responding to gravity on Earth where homeostatic needs require responses. The lack of gravity, such as in the International Space Station (ISS), causes acute, intra-generational changes in the quality of life. These include maintaining calcium levels in bone, maintaining muscle tone, and disturbances in the vestibular apparatus in the ears. These problems decrease work efficiency and quality of life of humans not only during microgravity exposures but also after return to higher gravity on Earth or destinations such as Mars or the Moon. It has been hypothesized that lack of gravity during mammalian development may cause prenatal, postnatal and transgenerational effects that conflict with the environment, especially if the developing organism and its progeny are returned, or introduced de novo, into the varied gravity environments mentioned above. Although chicken and frog pregastrulation development, and plant root development, have profound effects due to orientation of cues by gravity-sensing mechanisms and responses, mammalian development is not typically characterized as gravity-sensing. Although no effects of microgravity simulation (MGS) on mouse fertilization were observed in two reports, negative effects of MGS on early mammalian development after fertilization and before gastrulation are presented in four reports that vary with the modality of MGS. This review will analyze the positive and negative mammalian early developmental outcomes, and enzymatic and epigenetic mechanisms known to mediate developmental responses to simulated microgravity on Earth and microgravity during spaceflight experiments. We will update experimental techniques that have already been developed or need to be developed for zero gravity molecular, cellular, and developmental biology experiments.

Geometric measure of pairwise quantum discord for superpositions of multipartite generalized coherent states

NASA Astrophysics Data System (ADS)

Daoud, M.; Ahl Laamara, R.

2012-07-01

We give the explicit expressions of the pairwise quantum correlations present in superpositions of multipartite coherent states. A special attention is devoted to the evaluation of the geometric quantum discord. The dynamics of quantum correlations under a dephasing channel is analyzed. A comparison of geometric measure of quantum discord with that of concurrence shows that quantum discord in multipartite coherent states is more resilient to dissipative environments than is quantum entanglement. To illustrate our results, we consider some special superpositions of Weyl-Heisenberg, SU(2) and SU(1,1) coherent states which interpolate between Werner and Greenberger-Horne-Zeilinger states.

Programmable superpositions of Ising configurations

NASA Astrophysics Data System (ADS)

Sieberer, Lukas M.; Lechner, Wolfgang

2018-05-01

We present a framework to prepare superpositions of bit strings, i.e., many-body spin configurations, with deterministic programmable probabilities. The spin configurations are encoded in the degenerate ground states of the lattice-gauge representation of an all-to-all connected Ising spin glass. The ground-state manifold is invariant under variations of the gauge degrees of freedom, which take the form of four-body parity constraints. Our framework makes use of these degrees of freedom by individually tuning them to dynamically prepare programmable superpositions. The dynamics combines an adiabatic protocol with controlled diabatic transitions. We derive an effective model that allows one to determine the control parameters efficiently even for large system sizes.

Application of the superposition principle to solar-cell analysis

NASA Technical Reports Server (NTRS)

Lindholm, F. A.; Fossum, J. G.; Burgess, E. L.

1979-01-01

The superposition principle of differential-equation theory - which applies if and only if the relevant boundary-value problems are linear - is used to derive the widely used shifting approximation that the current-voltage characteristic of an illuminated solar cell is the dark current-voltage characteristic shifted by the short-circuit photocurrent. Analytical methods are presented to treat cases where shifting is not strictly valid. Well-defined conditions necessary for superposition to apply are established. For high injection in the base region, the method of analysis accurately yields the dependence of the open-circuit voltage on the short-circuit current (or the illumination level).

Identification of family-specific residue packing motifs and their use for structure-based protein function prediction: I. Method development.

PubMed

Bandyopadhyay, Deepak; Huan, Jun; Prins, Jan; Snoeyink, Jack; Wang, Wei; Tropsha, Alexander

2009-11-01

Protein function prediction is one of the central problems in computational biology. We present a novel automated protein structure-based function prediction method using libraries of local residue packing patterns that are common to most proteins in a known functional family. Critical to this approach is the representation of a protein structure as a graph where residue vertices (residue name used as a vertex label) are connected by geometrical proximity edges. The approach employs two steps. First, it uses a fast subgraph mining algorithm to find all occurrences of family-specific labeled subgraphs for all well characterized protein structural and functional families. Second, it queries a new structure for occurrences of a set of motifs characteristic of a known family, using a graph index to speed up Ullman's subgraph isomorphism algorithm. The confidence of function inference from structure depends on the number of family-specific motifs found in the query structure compared with their distribution in a large non-redundant database of proteins. This method can assign a new structure to a specific functional family in cases where sequence alignments, sequence patterns, structural superposition and active site templates fail to provide accurate annotation.

Knowledge-Guided Docking of WW Domain Proteins and Flexible Ligands

NASA Astrophysics Data System (ADS)

Lu, Haiyun; Li, Hao; Banu Bte Sm Rashid, Shamima; Leow, Wee Kheng; Liou, Yih-Cherng

Studies of interactions between protein domains and ligands are important in many aspects such as cellular signaling. We present a knowledge-guided approach for docking protein domains and flexible ligands. The approach is applied to the WW domain, a small protein module mediating signaling complexes which have been implicated in diseases such as muscular dystrophy and Liddle’s syndrome. The first stage of the approach employs a substring search for two binding grooves of WW domains and possible binding motifs of peptide ligands based on known features. The second stage aligns the ligand’s peptide backbone to the two binding grooves using a quasi-Newton constrained optimization algorithm. The backbone-aligned ligands produced serve as good starting points to the third stage which uses any flexible docking algorithm to perform the docking. The experimental results demonstrate that the backbone alignment method in the second stage performs better than conventional rigid superposition given two binding constraints. It is also shown that using the backbone-aligned ligands as initial configurations improves the flexible docking in the third stage. The presented approach can also be applied to other protein domains that involve binding of flexible ligand to two or more binding sites.

A linear programming approach to reconstructing subcellular structures from confocal images for automated generation of representative 3D cellular models.

PubMed

Wood, Scott T; Dean, Brian C; Dean, Delphine

2013-04-01

This paper presents a novel computer vision algorithm to analyze 3D stacks of confocal images of fluorescently stained single cells. The goal of the algorithm is to create representative in silico model structures that can be imported into finite element analysis software for mechanical characterization. Segmentation of cell and nucleus boundaries is accomplished via standard thresholding methods. Using novel linear programming methods, a representative actin stress fiber network is generated by computing a linear superposition of fibers having minimum discrepancy compared with an experimental 3D confocal image. Qualitative validation is performed through analysis of seven 3D confocal image stacks of adherent vascular smooth muscle cells (VSMCs) grown in 2D culture. The presented method is able to automatically generate 3D geometries of the cell's boundary, nucleus, and representative F-actin network based on standard cell microscopy data. These geometries can be used for direct importation and implementation in structural finite element models for analysis of the mechanics of a single cell to potentially speed discoveries in the fields of regenerative medicine, mechanobiology, and drug discovery. Copyright © 2012 Elsevier B.V. All rights reserved.

Reversibility and measurement in quantum computing

NASA Astrophysics Data System (ADS)

Leãao, J. P.

1998-03-01

The relation between computation and measurement at a fundamental physical level is yet to be understood. Rolf Landauer was perhaps the first to stress the strong analogy between these two concepts. His early queries have regained pertinence with the recent efforts to developed realizable models of quantum computers. In this context the irreversibility of quantum measurement appears in conflict with the requirement of reversibility of the overall computation associated with the unitary dynamics of quantum evolution. The latter in turn is responsible for the features of superposition and entanglement which make some quantum algorithms superior to classical ones for the same task in speed and resource demand. In this article we advocate an approach to this question which relies on a model of computation designed to enforce the analogy between the two concepts instead of demarcating them as it has been the case so far. The model is introduced as a symmetrization of the classical Turing machine model and is then carried on to quantum mechanics, first as a an abstract local interaction scheme (symbolic measurement) and finally in a nonlocal noninteractive implementation based on Aharonov-Bohm potentials and modular variables. It is suggested that this implementation leads to the most ubiquitous of quantum algorithms: the Discrete Fourier Transform.

Fast inverse scattering solutions using the distorted Born iterative method and the multilevel fast multipole algorithm

PubMed Central

Hesford, Andrew J.; Chew, Weng C.

2010-01-01

The distorted Born iterative method (DBIM) computes iterative solutions to nonlinear inverse scattering problems through successive linear approximations. By decomposing the scattered field into a superposition of scattering by an inhomogeneous background and by a material perturbation, large or high-contrast variations in medium properties can be imaged through iterations that are each subject to the distorted Born approximation. However, the need to repeatedly compute forward solutions still imposes a very heavy computational burden. To ameliorate this problem, the multilevel fast multipole algorithm (MLFMA) has been applied as a forward solver within the DBIM. The MLFMA computes forward solutions in linear time for volumetric scatterers. The typically regular distribution and shape of scattering elements in the inverse scattering problem allow the method to take advantage of data redundancy and reduce the computational demands of the normally expensive MLFMA setup. Additional benefits are gained by employing Kaczmarz-like iterations, where partial measurements are used to accelerate convergence. Numerical results demonstrate both the efficiency of the forward solver and the successful application of the inverse method to imaging problems with dimensions in the neighborhood of ten wavelengths. PMID:20707438

Determination of the maximum MGS mounting height : phase I crash testing.

DOT National Transportation Integrated Search

2012-03-09

Post-and-rail guardrail systems encounter environmental conditions, such as severe frost heave or erosion, which : may drastically affect the post embedment depth and rail mounting height. In addition, guardrail systems may be designed : to accommoda...

Evidence for Weak Crustal Magnetic Fields over the Hellas, Chryse, and Acidalia Planitiae

NASA Astrophysics Data System (ADS)

Lee, C. O.; Mitchell, D. L.; Lillis, R.; Lin, R. P.; Reme, H.; Cloutier, P. A.; Acuna, M. H.

2003-04-01

The Electron Reflectometer (ER) onboard Mars Global Surveyor (MGS) detected a plasma boundary between the ionosphere and the solar wind as the latter is diverted around and past the planet [Mitchell et al., GRL, 27, 1871, 2000; Mitchell et al., JGR, 106, 23419, 2001]. Above this boundary the 10-1000 eV electron population is dominated by solar wind electrons, while below the boundary it is dominated by ionospheric photoelectrons. This "photoelectron boundary", or PEB, is sensitive to pressure variations and moves vertically in response to changes in the ionospheric pressure from below and the solar wind pressure from above. The PEB is also sensitive to crustal magnetic fields, which locally increase the total ionospheric pressure and positively bias the PEB altitude. We have empirically modeled and removed systematic variations in the PEB altitude associated with the solar wind interaction, thus isolating perturbations caused by crustal magnetic fields. A map of the PEB altitude perturbations closely resembles maps of the horizontal component of the crustal magnetic field measured at 400 km by the MGS Magnetometer (MAG). We find a PEB altitude bias over the Hellas basin that is consistent with a horizontal magnetic field with an intensity of several nanotesla at 400 km altitude. This is compatible with upper limits to the horizontal crustal field strength set by MGS MAG measurements. Since there is no evidence for significant crustal magnetic sources within the basin from MAG data obtained during aerobraking [Acuna et al. Science, 284, 790, 1999] or from electron reflection data obtained in the mapping orbit [Lillis et al., this conference], the most likely explanation is that the observed horizontal field originates from sources around the Hellas perimeter. No detectable PEB or magnetic signature is observed over the younger Argyre and Isidis Basins. There is also evidence for a significant enhancement (several nanoteslas) in the crustal field strength over Chryse Planitia and much of Acidalia Planitia, which are thought to contain hundreds of meters of material from the main outflow channels on Mars [Carr, Lunar Planetary Sci., 18, 155, 1987]. These fields appear to extend northward from a group of crustal magnetic sources along the dichotomy boundary that were mapped by the MGS Magnetometer.

Time-variable and static gravity field of Mars from MGS, Mars Odyssey, and MRO

NASA Astrophysics Data System (ADS)

Genova, Antonio; Goossens, Sander; Lemoine, Frank G.; Mazarico, Erwan; Neumann, Gregory A.; Smith, David E.; Zuber, Maria T.

2016-04-01

The Mars Global Surveyor (MGS), Mars Odyssey (ODY), and Mars Reconnaissance Orbiter (MRO) missions have significantly contributed to the determination of global high-resolution global gravity fields of Mars for the last 16 years. All three spacecraft were located in sun-synchronous, near-circular polar mapping orbits for their primary mission phases at different altitudes and Local Solar Time (LST). X-Band tracking data have been acquired from the NASA Deep Space Network (DSN) providing information on the time-variable and static gravity field of Mars. MGS operated between 1999 and 2006 at 390 km altitude. ODY and MRO are still orbiting Mars with periapsis altitudes of 400 km and 255 km, respectively. Before entering these mapping phases, all three spacecraft collected radio tracking data at lower altitudes (˜170-200 km) that help improve the resolution of the gravity field of Mars in specific regions. We analyzed the entire MGS radio tracking data set, and ODY and MRO radio data until 2015. These observations were processed using a batch least-squares filter through the NASA GSFC GEODYN II software. We combined all 2- and 3-way range rate data to estimate the global gravity field of Mars to degree and order 120, the seasonal variations of gravity harmonic coefficients C20, C30, C40 and C50 and the Love number k2. The gravity contribution of Mars atmospheric pressures on the surface of the planet has been discerned from the time-varying and static gravity harmonic coefficients. Surface pressure grids computed using the Mars-GRAM 2010 atmospheric model, with 2.5° x2.5° spatial and 2-h resolution, are converted into gravity spherical harmonic coefficients. Consequently, the estimated gravity and tides provide direct information on the solid planet. We will present the new Goddard Mars Model (GMM-3) of Mars gravity field in spherical harmonics to degree and order 120. The solution includes the Love number k2 and the 3-frequencies (annual, semi-annual, and tri-annual) time-variable coefficients of the gravity zonal harmonics C20, C30, C40 and C50. The seasonal gravity coefficients led us to determine the inter-annual mass exchange between the polar caps over ˜11 years from October 2002 to November 2014.

In vivo confocal microscopy of meibomian glands in primary blepharospasm: A prospective case-control study in a Chinese population.

PubMed

Lin, Tong; Gong, Lan

2016-06-01

The aim of the study was to evaluate the morphological changes of meibomian glands (MGs) in primary blepharospasm (PBS) by in vivo laser scanning confocal microscopy (LSCM) and to investigate the correlations between clinical data of PBS and LSCM parameters of MGs. This prospective and case-control study recruited 30 consecutive PBS patients and 30 age- and gender-matched healthy controls. After questionnaire assessments of ocular surface disease index (OSDI), Jankovic rating scale, and blepharospasm disability index, all subjects underwent blink rate evaluation, tear film break-up time (TBUT), corneal fluorescein staining (CFS), Schirmer test, MG expressibility, meibum quality, MG dropout, and LSCM examination of the MGs. The main LSCM outcomes included the mean MG acinar area and density, orifice diameter, meibum secretion reflectivity, acinar irregularity, and inhomogeneity of interstice and acinar wall. The PBS patients had significantly higher blink rate, higher OSDI and CFS scores, lower TBUT and Schirmer test value, and worse MG expressibility than the controls (All P < 0.05), whereas meibum quality showed no difference (P > 0.05). The PBS patients showed lower values of MG acinar area, orifice diameter and meibum secretion reflectivity, and higher scores of acinar irregularity and inhomogeneity of interstices than the controls (All P < 0.05). For the PBS patients, the severity of blepharospasm evaluated by JCR scale was strong correlated with MG acinar area (P < 0.001), orifice diameter (P = 0.002), meibum secretion reflectivity (P = 0.002), and MG acinar irregularity (P = 0.013). The MG expressibility was significantly correlated to MG acinar area (P = 0.039), orifice diameter (P < 0.001), and MG acinar irregularity (P = 0.014). The OSDI score was moderate correlated with MG acinar irregularity (P = 0.016), whereas the TBUT value was positively correlated with MG acinar area (P = 0.045) and negatively correlated to MG acinar irregularity (P = 0.016). The CFS score was negatively correlated to MG orifice diameter (P = 0.008). The LSCM provided a noninvasive tool for in vivo histopathologic studies of MGs in PBS patients. The excessive constriction of lid muscles closely related to MG morphological alterations of PBS, which offered a new research approach to interpret the interactional mechanism between dry eye and PBS.

Multi-Scale Modeling of Microstructural Evolution in Structural Metallic Systems

NASA Astrophysics Data System (ADS)

Zhao, Lei

Metallic alloys are a widely used class of structural materials, and the mechanical properties of these alloys are strongly dependent on the microstructure. Therefore, the scientific design of metallic materials with superior mechanical properties requires the understanding of the microstructural evolution. Computational models and simulations offer a number of advantages over experimental techniques in the prediction of microstructural evolution, because they can allow studies of microstructural evolution in situ, i.e., while the material is mechanically loaded (meso-scale simulations), and bring atomic-level insights into the microstructure (atomistic simulations). In this thesis, we applied a multi-scale modeling approach to study the microstructural evolution in several metallic systems, including polycrystalline materials and metallic glasses (MGs). Specifically, for polycrystalline materials, we developed a coupled finite element model that combines phase field method and crystal plasticity theory to study the plasticity effect on grain boundary (GB) migration. Our model is not only coupled strongly (i.e., we include plastic driving force on GB migration directly) and concurrently (i.e., coupled equations are solved simultaneously), but also it qualitatively captures such phenomena as the dislocation absorption by mobile GBs. The developed model provides a tool to study the microstructural evolution in plastically deformed metals and alloys. For MGs, we used molecular dynamics (MD) simulations to investigate the nucleation kinetics in the primary crystallization in Al-Sm system. We calculated the time-temperature-transformation curves for low Sm concentrations, from which the strong suppressing effect of Sm solute on Al nucleation and its influencing mechanism are revealed. Also, through the comparative analysis of both Al attachment and Al diffusion in MGs, it has been found that the nucleation kinetics is controlled by interfacial attachment of Al, and that the attachment behavior takes place collectively and heterogeneously, similarly to Al diffusion in MGs. Finally, we applied the MD technique to study the origin of five-fold twinning nucleation during the solidification of Al base alloys. We studied several model alloys and reported the observed nucleation pathway. We found that the key factors controlling the five-fold twinning are the twin boundary energy and the formation of pentagon structures, and the twin boundary energy plays the dominant role in the five-fold twinning in the model alloys studied.

In vivo confocal microscopy of meibomian glands in primary blepharospasm

PubMed Central

Lin, Tong; Gong, Lan

2016-01-01

Abstract The aim of the study was to evaluate the morphological changes of meibomian glands (MGs) in primary blepharospasm (PBS) by in vivo laser scanning confocal microscopy (LSCM) and to investigate the correlations between clinical data of PBS and LSCM parameters of MGs. This prospective and case–control study recruited 30 consecutive PBS patients and 30 age- and gender-matched healthy controls. After questionnaire assessments of ocular surface disease index (OSDI), Jankovic rating scale, and blepharospasm disability index, all subjects underwent blink rate evaluation, tear film break-up time (TBUT), corneal fluorescein staining (CFS), Schirmer test, MG expressibility, meibum quality, MG dropout, and LSCM examination of the MGs. The main LSCM outcomes included the mean MG acinar area and density, orifice diameter, meibum secretion reflectivity, acinar irregularity, and inhomogeneity of interstice and acinar wall. The PBS patients had significantly higher blink rate, higher OSDI and CFS scores, lower TBUT and Schirmer test value, and worse MG expressibility than the controls (All P < 0.05), whereas meibum quality showed no difference (P > 0.05). The PBS patients showed lower values of MG acinar area, orifice diameter and meibum secretion reflectivity, and higher scores of acinar irregularity and inhomogeneity of interstices than the controls (All P < 0.05). For the PBS patients, the severity of blepharospasm evaluated by JCR scale was strong correlated with MG acinar area (P < 0.001), orifice diameter (P = 0.002), meibum secretion reflectivity (P = 0.002), and MG acinar irregularity (P = 0.013). The MG expressibility was significantly correlated to MG acinar area (P = 0.039), orifice diameter (P < 0.001), and MG acinar irregularity (P = 0.014). The OSDI score was moderate correlated with MG acinar irregularity (P = 0.016), whereas the TBUT value was positively correlated with MG acinar area (P = 0.045) and negatively correlated to MG acinar irregularity (P = 0.016). The CFS score was negatively correlated to MG orifice diameter (P = 0.008). The LSCM provided a noninvasive tool for in vivo histopathologic studies of MGs in PBS patients. The excessive constriction of lid muscles closely related to MG morphological alterations of PBS, which offered a new research approach to interpret the interactional mechanism between dry eye and PBS. PMID:27281086

SU-E-T-465: Dose Calculation Method for Dynamic Tumor Tracking Using a Gimbal-Mounted Linac

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sugimoto, S; Inoue, T; Kurokawa, C

Purpose: Dynamic tumor tracking using the gimbal-mounted linac (Vero4DRT, Mitsubishi Heavy Industries, Ltd., Japan) has been available when respiratory motion is significant. The irradiation accuracy of the dynamic tumor tracking has been reported to be excellent. In addition to the irradiation accuracy, a fast and accurate dose calculation algorithm is needed to validate the dose distribution in the presence of respiratory motion because the multiple phases of it have to be considered. A modification of dose calculation algorithm is necessary for the gimbal-mounted linac due to the degrees of freedom of gimbal swing. The dose calculation algorithm for the gimbalmore » motion was implemented using the linear transformation between coordinate systems. Methods: The linear transformation matrices between the coordinate systems with and without gimbal swings were constructed using the combination of translation and rotation matrices. The coordinate system where the radiation source is at the origin and the beam axis along the z axis was adopted. The transformation can be divided into the translation from the radiation source to the gimbal rotation center, the two rotations around the center relating to the gimbal swings, and the translation from the gimbal center to the radiation source. After operating the transformation matrix to the phantom or patient image, the dose calculation can be performed as the no gimbal swing. The algorithm was implemented in the treatment planning system, PlanUNC (University of North Carolina, NC). The convolution/superposition algorithm was used. The dose calculations with and without gimbal swings were performed for the 3 × 3 cm{sup 2} field with the grid size of 5 mm. Results: The calculation time was about 3 minutes per beam. No significant additional time due to the gimbal swing was observed. Conclusions: The dose calculation algorithm for the finite gimbal swing was implemented. The calculation time was moderate.« less

The Evolution and Development of Neural Superposition

PubMed Central

Agi, Egemen; Langen, Marion; Altschuler, Steven J.; Wu, Lani F.; Zimmermann, Timo

2014-01-01

Visual systems have a rich history as model systems for the discovery and understanding of basic principles underlying neuronal connectivity. The compound eyes of insects consist of up to thousands of small unit eyes that are connected by photoreceptor axons to set up a visual map in the brain. The photoreceptor axon terminals thereby represent neighboring points seen in the environment in neighboring synaptic units in the brain. Neural superposition is a special case of such a wiring principle, where photoreceptors from different unit eyes that receive the same input converge upon the same synaptic units in the brain. This wiring principle is remarkable, because each photoreceptor in a single unit eye receives different input and each individual axon, among thousands others in the brain, must be sorted together with those few axons that have the same input. Key aspects of neural superposition have been described as early as 1907. Since then neuroscientists, evolutionary and developmental biologists have been fascinated by how such a complicated wiring principle could evolve, how it is genetically encoded, and how it is developmentally realized. In this review article, we will discuss current ideas about the evolutionary origin and developmental program of neural superposition. Our goal is to identify in what way the special case of neural superposition can help us answer more general questions about the evolution and development of genetically “hard-wired” synaptic connectivity in the brain. PMID:24912630

Impact of chemical plant start-up emissions on ambient ozone concentration

NASA Astrophysics Data System (ADS)

Ge, Sijie; Wang, Sujing; Xu, Qiang; Ho, Thomas

2017-09-01

Flare emissions, especially start-up flare emissions, during chemical plant operations generate large amounts of ozone precursors that may cause highly localized and transient ground-level ozone increment. Such an adverse ozone impact could be aggravated by the synergies of multiple plant start-ups in an industrial zone. In this paper, a systematic study on ozone increment superposition due to chemical plant start-up emissions has been performed. It employs dynamic flaring profiles of two olefin plants' start-ups to investigate the superposition of the regional 1-hr ozone increment. It also summaries the superposition trend by manipulating the starting time (00:00-10:00) of plant start-up operations and the plant distance (4-32 km). The study indicates that the ozone increment induced by simultaneous start-up emissions from multiple chemical plants generally does not follow the linear superposition of the ozone increment induced by individual plant start-ups. Meanwhile, the trend of such nonlinear superposition related to the temporal (starting time and operating hours of plant start-ups) and spatial (plant distance) factors is also disclosed. This paper couples dynamic simulations of chemical plant start-up operations with air-quality modeling and statistical methods to examine the regional ozone impact. It could be helpful for technical decision support for cost-effective air-quality and industrial flare emission controls.

The evolution and development of neural superposition.

PubMed

Agi, Egemen; Langen, Marion; Altschuler, Steven J; Wu, Lani F; Zimmermann, Timo; Hiesinger, Peter Robin

2014-01-01

Visual systems have a rich history as model systems for the discovery and understanding of basic principles underlying neuronal connectivity. The compound eyes of insects consist of up to thousands of small unit eyes that are connected by photoreceptor axons to set up a visual map in the brain. The photoreceptor axon terminals thereby represent neighboring points seen in the environment in neighboring synaptic units in the brain. Neural superposition is a special case of such a wiring principle, where photoreceptors from different unit eyes that receive the same input converge upon the same synaptic units in the brain. This wiring principle is remarkable, because each photoreceptor in a single unit eye receives different input and each individual axon, among thousands others in the brain, must be sorted together with those few axons that have the same input. Key aspects of neural superposition have been described as early as 1907. Since then neuroscientists, evolutionary and developmental biologists have been fascinated by how such a complicated wiring principle could evolve, how it is genetically encoded, and how it is developmentally realized. In this review article, we will discuss current ideas about the evolutionary origin and developmental program of neural superposition. Our goal is to identify in what way the special case of neural superposition can help us answer more general questions about the evolution and development of genetically "hard-wired" synaptic connectivity in the brain.

Hadron-rich cosmic-ray families detected by emulsion chamber.

NASA Astrophysics Data System (ADS)

Navia, C. E.; Augusto, C. R. K.; Pinto, F. A.; Shibuya, H.

1995-11-01

Observed hadrons in excess, larger-than-expected charged mesons (pions) in cosmic-ray families detected in emulsion chamber experiment at mountain altitude and produced in a cosmic-ray hadronic interaction not far from the PeV energy region are studied. The hypothesis that these extra hadrons could be a bundle of surviving nuclear fragments (nucleons) is verified through a simulation method using a hybrid code composed of a superposition model to describe the number of interacting nucleon-nucleon pairs in a nucleus-nucleus collision. Together with the UA5 algorithm to describe a nucleon-nucleon collision, atmospheric propagation structure is also considered. A comparison between simulation output with experimental data shows that the surviving-nuclear-fragments hypothesis is not enough to explain the non-pionic hadron excess, even if a heavy dominance composition in the primary flux is considered.

Entanglement by Path Identity.

PubMed

Krenn, Mario; Hochrainer, Armin; Lahiri, Mayukh; Zeilinger, Anton

2017-02-24

Quantum entanglement is one of the most prominent features of quantum mechanics and forms the basis of quantum information technologies. Here we present a novel method for the creation of quantum entanglement in multipartite and high-dimensional systems. The two ingredients are (i) superposition of photon pairs with different origins and (ii) aligning photons such that their paths are identical. We explain the experimentally feasible creation of various classes of multiphoton entanglement encoded in polarization as well as in high-dimensional Hilbert spaces-starting only from nonentangled photon pairs. For two photons, arbitrary high-dimensional entanglement can be created. The idea of generating entanglement by path identity could also apply to quantum entities other than photons. We discovered the technique by analyzing the output of a computer algorithm. This shows that computer designed quantum experiments can be inspirations for new techniques.

Entanglement by Path Identity

NASA Astrophysics Data System (ADS)

Krenn, Mario; Hochrainer, Armin; Lahiri, Mayukh; Zeilinger, Anton

2017-02-01

Quantum entanglement is one of the most prominent features of quantum mechanics and forms the basis of quantum information technologies. Here we present a novel method for the creation of quantum entanglement in multipartite and high-dimensional systems. The two ingredients are (i) superposition of photon pairs with different origins and (ii) aligning photons such that their paths are identical. We explain the experimentally feasible creation of various classes of multiphoton entanglement encoded in polarization as well as in high-dimensional Hilbert spaces—starting only from nonentangled photon pairs. For two photons, arbitrary high-dimensional entanglement can be created. The idea of generating entanglement by path identity could also apply to quantum entities other than photons. We discovered the technique by analyzing the output of a computer algorithm. This shows that computer designed quantum experiments can be inspirations for new techniques.