Probabilistic 3-D time-lapse inversion of magnetotelluric data: application to an enhanced geothermal system

NASA Astrophysics Data System (ADS)

Rosas-Carbajal, M.; Linde, N.; Peacock, J.; Zyserman, F. I.; Kalscheuer, T.; Thiel, S.

2015-12-01

Surface-based monitoring of mass transfer caused by injections and extractions in deep boreholes is crucial to maximize oil, gas and geothermal production. Inductive electromagnetic methods, such as magnetotellurics, are appealing for these applications due to their large penetration depths and sensitivity to changes in fluid conductivity and fracture connectivity. In this work, we propose a 3-D Markov chain Monte Carlo inversion of time-lapse magnetotelluric data to image mass transfer following a saline fluid injection. The inversion estimates the posterior probability density function of the resulting plume, and thereby quantifies model uncertainty. To decrease computation times, we base the parametrization on a reduced Legendre moment decomposition of the plume. A synthetic test shows that our methodology is effective when the electrical resistivity structure prior to the injection is well known. The centre of mass and spread of the plume are well retrieved. We then apply our inversion strategy to an injection experiment in an enhanced geothermal system at Paralana, South Australia, and compare it to a 3-D deterministic time-lapse inversion. The latter retrieves resistivity changes that are more shallow than the actual injection interval, whereas the probabilistic inversion retrieves plumes that are located at the correct depths and oriented in a preferential north-south direction. To explain the time-lapse data, the inversion requires unrealistically large resistivity changes with respect to the base model. We suggest that this is partly explained by unaccounted subsurface heterogeneities in the base model from which time-lapse changes are inferred.

Probabilistic 3-D time-lapse inversion of magnetotelluric data: Application to an enhanced geothermal system

USGS Publications Warehouse

Rosas-Carbajal, Marina; Linde, Nicolas; Peacock, Jared R.; Zyserman, F. I.; Kalscheuer, Thomas; Thiel, Stephan

2015-01-01

Surface-based monitoring of mass transfer caused by injections and extractions in deep boreholes is crucial to maximize oil, gas and geothermal production. Inductive electromagnetic methods, such as magnetotellurics, are appealing for these applications due to their large penetration depths and sensitivity to changes in fluid conductivity and fracture connectivity. In this work, we propose a 3-D Markov chain Monte Carlo inversion of time-lapse magnetotelluric data to image mass transfer following a saline fluid injection. The inversion estimates the posterior probability density function of the resulting plume, and thereby quantifies model uncertainty. To decrease computation times, we base the parametrization on a reduced Legendre moment decomposition of the plume. A synthetic test shows that our methodology is effective when the electrical resistivity structure prior to the injection is well known. The centre of mass and spread of the plume are well retrieved.We then apply our inversion strategy to an injection experiment in an enhanced geothermal system at Paralana, South Australia, and compare it to a 3-D deterministic time-lapse inversion. The latter retrieves resistivity changes that are more shallow than the actual injection interval, whereas the probabilistic inversion retrieves plumes that are located at the correct depths and oriented in a preferential north-south direction. To explain the time-lapse data, the inversion requires unrealistically large resistivity changes with respect to the base model. We suggest that this is partly explained by unaccounted subsurface heterogeneities in the base model from which time-lapse changes are inferred.

Time-Lapse Electrical Geophysical Monitoring of Amendment-Based Biostimulation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Versteeg, Roelof; Day-Lewis, Frederick D.

Biostimulation is increasingly used to accelerate microbial remediation of recalcitrant groundwater contaminants. Effective application of biostimulation requires successful emplacement of amendment in the contaminant target zone. Verification of remediation performance requires postemplacement assessment and contaminant monitoring. Sampling based approaches are expensive and provide low-density spatial and temporal information. Time-lapse electrical resistivity tomography (ERT) is an effective geophysical method for determining temporal changes in subsurface electrical conductivity. Because remedial amendments and biostimulation-related biogeochemical processes often change subsurface electrical conductivity, ERT can complement and enhance sampling-based approaches for assessing emplacement and monitoring biostimulation-based remediation. Field studies demonstrating the ability of time-lapse ERTmore » to monitor amendment emplacement and behavior were performed during a biostimulation remediation effort conducted at the Department of Defense Reutilization and Marketing Office (DRMO) Yard, in Brandywine, Maryland, United States. Geochemical fluid sampling was used to calibrate a petrophysical relation in order to predict groundwater indicators of amendment distribution. The petrophysical relations were field validated by comparing predictions to sequestered fluid sample results, thus demonstrating the potential of electrical geophysics for quantitative assessment of amendment-related geochemical properties. Crosshole radar zero-offset profile and borehole geophysical logging were also performed to augment the data set and validate interpretation. In addition to delineating amendment transport in the first 10 months after emplacement, the time-lapse ERT results show later changes in bulk electrical properties interpreted as mineral precipitation. Results support the use of more cost-effective surfacebased ERT in conjunction with limited field sampling to improve spatial and temporal monitoring of amendment emplacement and remediation performance.« less

Coastal Permafrost Bluff Response to Summer Warming, Barter Island, NE Alaska

NASA Astrophysics Data System (ADS)

Richmond, B. M.; Gibbs, A.; Johnson, C. D.; Swarzenski, P. W.; Oberle, F. J.; Tulaczyk, S. M.; Lorenson, T. D.

2016-12-01

Observations of warming air and sea temperatures in the Arctic are leading to longer periods of permafrost thaw and ice-free conditions during summer, which lead to increased exposure to coastal storm surge, wave impacts, and heightened erosion. Recently collected air and soil (bluff) temperatures, atmospheric pressure, water levels, time-lapse photography, aerial photography and satellite imagery, and electrical resistivity tomography (ERT) surveys were used to document coastal bluff morphological response to seasonal warming. Data collection instruments and time-lapse cameras installed overlooking a bluff face on the exposed open ocean coast and within an erosional gully were used to create an archive of hourly air temperature, pressure, bluff morphology, and sea-state conditions allowing for documentation of individual bluff failure events and coincident meteorology. Permafrost boreholes as deep as 6 m from the upper bluff tundra surface were fitted with thermistor arrays to record a high resolution temperature record that spanned an initial frozen state, a summer thaw cycle, and subsequent re-freezing. Late summer ERT surveys were used to link temperature observations to subsurface electrical resistivities and active-layer dynamics. Preliminary observations suggest surface warming and active layer growth are responsible for a significant amount of bluff face failures that are exacerbated in the shore perpendicular gullies and along the exposed ocean coast. Electrical resistivity surveys and geochemical data reveal concentrated brines at depth, which likely contribute to enhanced, localized erosion in weakened strata.

Forward modeling to investigate inversion artifacts resulting from time-lapse electrical resistivity tomography during rainfall simulations

NASA Astrophysics Data System (ADS)

Carey, Austin M.; Paige, Ginger B.; Carr, Bradley J.; Dogan, Mine

2017-10-01

Time-lapse electrical resistivity tomography (ERT) is commonly used as a minimally invasive tool to study infiltration processes. In 2014, we conducted field studies coupling variable intensity rainfall simulation with high-resolution ERT to study the real-time partitioning of rainfall into surface and subsurface response. The significant contrast in resistivity in the subsurface from large changes in subsurface moisture resulted in artifacts during the inversion process of the time-lapse ERT data collected using a dipole-dipole electrode array. These artifacts, which are not representative of real subsurface moisture dynamics, have been shown to arise during time-lapse inversion of ERT data and may be subject to misinterpretation. Forward modeling of the infiltration process post field experiments using a two-layer system (saprolite overlain by a soil layer) was used to generate synthetic datasets. The synthetic data were used to investigate the influence of both changes in volumetric moisture content and electrode configuration on the development of the artifacts identified in the field datasets. For the dipole-dipole array, we found that a decrease in the resistivity of the bottom layer by 67% resulted in a 50% reduction in artifact development. Artifacts for the seven additional array configurations tested, ranged from a 19% increase in artifact development (using an extended dipole-dipole array) to as much as a 96% decrease in artifact development (using a wenner-alpha array), compared to that of the dipole-dipole array. Moreover, these arrays varied in their ability to accurately delineate the infiltration front. Model results showed that the modified pole-dipole array was able to accurately image the infiltration zone and presented fewer artifacts for our experiments. In this study, we identify an optimal array type for imaging rainfall-infiltration dynamics that reduces artifacts. The influence of moisture contrast between the infiltrating water and the bulk subsurface material was characterized and shown to be a major factor in contributing to artifact development. Through forward modeling, this study highlights the importance of considering array type and subsurface moisture conditions when using time-lapse resistivity to obtain reliable estimates of vadose zone flow processes during rainfall-infiltration events.

Monitoring water flows with time-lapse Electrical Resistivity Tomography on the Super-Sauze landslide

NASA Astrophysics Data System (ADS)

Gance, J.; Sailhac, P.; Malet, J.-P.; Grandjean, G.; Supper, R.; Jochum, B.; Ottowitz, D.

2012-04-01

This work presents results of a permanent hydro-geophysical monitoring of an active landslide developed in clay-shales. Hydrology has been proved to be a major factor controlling the Super-Sauze earthflow behavior, but it knowledge still limited mainly because of the importance of spatial heterogeneities. The geometry of the bedrock creates internal crests and gullies that can guide waterflows or create a lock and engender an excess of pore water pressure; the soil surface characteristics plays also a large role in the surface hydraulic conductivity, and therefore, on the infiltration pattern. To understand in detail these processes, it is therefore important to monitor spatially at large scale (with high resolution) those phenomena and to overcome the monitoring difficulties inherent to a fast-moving clayey earthflow. The objectives of the survey are to identify and characterize spatially and temporarily the water flow circulation within the landslide body over a period of one year. The studied profile measures 114 m long and is surveyed with 93 electrodes spaced from 0.5, 1 or 2 meter according the soil surface cracking. Four resistivity datasets of 4300 measurements are acquired each day using a gradient array since May 2011. The monitoring is performed with the GEOMON4D system, developed by the Geological Survey of Austria. To facilitate the interpretation, humidity, conductivity, temperature, and piezometer sensors are placed along the profile. Two dGPS antenna placed upstream and downstream the profile allow to correlate the results with soil displacement. Lefranc tests and granulometry results realized on several samples have shown the important heterogeneities of the near surface. The objective of this work is to present the data processing strategy for the analysis of long periods time-lapse ERT survey of natural rain events taking into account changes through time of the position of the electrodes, changes in the soil surface state and important changes in sub-surface soil temperature. Two high-resolution optical cameras are installed on stable crests on the side of the cross-sections and time-lapse stereoscopy is used to reconstruct the displacement field to locate the electrodes in space and time (in order to take into account changes in the dipole geometry). The apparent electrical resistivity values were inverted with a time-lapse approach using an initial model constructed from statistical analysis of resistivity data and a priori knowledge on the landslide structure from a previous geotechnical model. The near surface apparent resistivity can vary of ten percent without any input of water. This shows the importance of temperature effect on the measurement. The temperature correction is handled from a complete study of the soil temperature propagation solving the heat equation with several temperature probes placed at different depths in soil and in the water table. The results are interpreted in combination to hydrological data (rain, water table level). The acquisition of 8 ERT all over the studied area, in different directions permits to create by interpolation a 3D electrical resistivity model of the area. This model shows the importance of the bedrock topography because high water content areas are visible at the theoretical hydrological network computed from the 3D geotechnical model of Travelletti and Malet (2011). Transversal waterflow circulation not predicted are also visible and permit to interpret the results taking into account the 3D structure of the landslide. A 250 m long P-wave tomography acquired on the studied profile and inversed with a quasi-Newton algorithm that uses Fresnel wavepaths and the finite bandwidth of the source signal, specially developed for the study of very heterogeneous soils, shows a very good correlation with electrical resistivity and permits to propose a geotechnical model of the profile. Spatially heterogeneous water flow patterns are identified and the presence of a deep water supply is hypothesized downstream of the investigated profile. The presentation will focus on some key factors and parameters to take into account for the analysis of time-lapse resistivity data. This work was supported by the Austrian Science Fund (FWF) (contract TRP 175-N21) and the French National Research Agency (ANR).

PFLOTRAN-E4D: A parallel open source PFLOTRAN module for simulating time-lapse electrical resistivity data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Hammond, Glenn E.; Chen, Xingyuan

Time-lapse electrical resistivity tomography (ERT) is finding increased application for remotely monitoring processes occurring in the near subsurface in three-dimensions (i.e. 4D monitoring). However, there are few codes capable of simulating the evolution of subsurface resistivity and corresponding tomographic measurements arising from a particular process, particularly in parallel and with an open source license. Herein we describe and demonstrate an electrical resistivity tomography module for the PFLOTRAN subsurface flow and reactive transport simulation code, named PFLOTRAN-E4D. The PFLOTRAN-E4D module operates in parallel using a dedicated set of compute cores in a master-slave configuration. At each time step, the master processesmore » receives subsurface states from PFLOTRAN, converts those states to bulk electrical conductivity, and instructs the slave processes to simulate a tomographic data set. The resulting multi-physics simulation capability enables accurate feasibility studies for ERT imaging, the identification of the ERT signatures that are unique to a given process, and facilitates the joint inversion of ERT data with hydrogeological data for subsurface characterization. PFLOTRAN-E4D is demonstrated herein using a field study of stage-driven groundwater/river water interaction ERT monitoring along the Columbia River, Washington, USA. Results demonstrate the complex nature of subsurface electrical conductivity changes, in both the saturated and unsaturated zones, arising from river stage fluctuations and associated river water intrusion into the aquifer. Furthermore, the results also demonstrate the sensitivity of surface based ERT measurements to those changes over time.« less

PFLOTRAN-E4D: A parallel open source PFLOTRAN module for simulating time-lapse electrical resistivity data

DOE PAGES

Johnson, Timothy C.; Hammond, Glenn E.; Chen, Xingyuan

2016-09-22

Time-lapse electrical resistivity tomography (ERT) is finding increased application for remotely monitoring processes occurring in the near subsurface in three-dimensions (i.e. 4D monitoring). However, there are few codes capable of simulating the evolution of subsurface resistivity and corresponding tomographic measurements arising from a particular process, particularly in parallel and with an open source license. Herein we describe and demonstrate an electrical resistivity tomography module for the PFLOTRAN subsurface flow and reactive transport simulation code, named PFLOTRAN-E4D. The PFLOTRAN-E4D module operates in parallel using a dedicated set of compute cores in a master-slave configuration. At each time step, the master processesmore » receives subsurface states from PFLOTRAN, converts those states to bulk electrical conductivity, and instructs the slave processes to simulate a tomographic data set. The resulting multi-physics simulation capability enables accurate feasibility studies for ERT imaging, the identification of the ERT signatures that are unique to a given process, and facilitates the joint inversion of ERT data with hydrogeological data for subsurface characterization. PFLOTRAN-E4D is demonstrated herein using a field study of stage-driven groundwater/river water interaction ERT monitoring along the Columbia River, Washington, USA. Results demonstrate the complex nature of subsurface electrical conductivity changes, in both the saturated and unsaturated zones, arising from river stage fluctuations and associated river water intrusion into the aquifer. Furthermore, the results also demonstrate the sensitivity of surface based ERT measurements to those changes over time.« less

Time-lapse three-dimensional inversion of complex conductivity data using an active time constrained (ATC) approach

USGS Publications Warehouse

Karaoulis, M.; Revil, A.; Werkema, D.D.; Minsley, B.J.; Woodruff, W.F.; Kemna, A.

2011-01-01

Induced polarization (more precisely the magnitude and phase of impedance of the subsurface) is measured using a network of electrodes located at the ground surface or in boreholes. This method yields important information related to the distribution of permeability and contaminants in the shallow subsurface. We propose a new time-lapse 3-D modelling and inversion algorithm to image the evolution of complex conductivity over time. We discretize the subsurface using hexahedron cells. Each cell is assigned a complex resistivity or conductivity value. Using the finite-element approach, we model the in-phase and out-of-phase (quadrature) electrical potentials on the 3-D grid, which are then transformed into apparent complex resistivity. Inhomogeneous Dirichlet boundary conditions are used at the boundary of the domain. The calculation of the Jacobian matrix is based on the principles of reciprocity. The goal of time-lapse inversion is to determine the change in the complex resistivity of each cell of the spatial grid as a function of time. Each model along the time axis is called a 'reference space model'. This approach can be simplified into an inverse problem looking for the optimum of several reference space models using the approximation that the material properties vary linearly in time between two subsequent reference models. Regularizations in both space domain and time domain reduce inversion artefacts and improve the stability of the inversion problem. In addition, the use of the time-lapse equations allows the simultaneous inversion of data obtained at different times in just one inversion step (4-D inversion). The advantages of this new inversion algorithm are demonstrated on synthetic time-lapse data resulting from the simulation of a salt tracer test in a heterogeneous random material described by an anisotropic semi-variogram. ?? 2011 The Authors Geophysical Journal International ?? 2011 RAS.

Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring, SoilCAM project highlights

NASA Astrophysics Data System (ADS)

French, H. K.; Van Der Zee, S. E.; Wehrer, M.; Godio, A.; Pedersen, L. B.; Tsocano, G.

2013-12-01

The SoilCAM project (2008- 2012, EU-FP7-212663) aimed at improving methods for monitoring subsurace contaminant distribution and biodegradation. Two test sites were chosen, Oslo airport Gardermoen, Norway where de-icing agents infiltrate the soil during snowmelt and the Trecate site in Italy where an inland crude oil spill occurred in 1994. A number of geophysical investigation techniques were combined with soil and water sampling techniques. Data obtained from time-lapse measurements were further analysed by numerical modelling of flow and transport at different scales in order to characterise transport processes in the unsaturated and saturated zones. Laboratory experiments provided physical and biogeochemical data for model parameterisation and to select remediation methods. The geophysical techniques were used to map geological heterogeneities and to conduct time-lapse measurements of processes in the unsaturated zone. Both cross borehole and surface electrodes were used for electrical resistivity and induced polarisation surveys. Results showed clear indications of areas highly affected by de-icing chemicals along the runway at Oslo airport. The time lapse measurements along the runway at the airport showed infiltration patterns during snowmelt and were used to validate 2D unsaturated flow and transport simulations using SUTRA. The simulations illustrate the effect of layering geological structures and membranes, buried parallel to the runway, on the flow pattern. Complex interaction between bio-geo-chemical processes in a 1D vertical profile along the runway were described with the ORCHESTRA model. Smaller scale field site measurements revealed increase of iron and manganese during degradation of de-icing chemicals. At the Trecate site a combination of georadar, electrical resistivity and radio magneto telluric provided a broad outline of the geology down to 50 m. Anomalies in the Induced polarisation and electrical resistivity data from the cross borehole measurements indicate where the remaining crude oil can be found. Water samples from multilevel samplers reveal crude oil present in emulsion in the zone of groundwater fluctuations, highlighting the importance of colloidal transport. Modelling of multiphase flow of the fluctuating groundwater level explains the lack of horizontal displacement of the plume in the area. Geochemistry of the groundwater clearly indicates degradation of hydrocarbons under iron- and sulphate reducing conditions, but changes were too slow to be mapped by time-lapse geophysical measurements during the project period. MODFLOW was used to simulate the regional groundwater flow and transport in the area. Highlights of the results from both test sites will be presented as an integrated overview. Snow removal at Oslo airport

Near-Surface Geophysical Mapping of the Hydrological Response to an Intense Rainfall Event at the Field Scale

NASA Astrophysics Data System (ADS)

Martínez, G.; Vanderlinden, K.; Giraldez, J. V.; Espejo, A. J.; Muriel, J. L.

2009-12-01

Soil moisture plays an important role in a wide variety of biogeochemical fluxes in the soil-plant-atmosphere system and governs the (eco)hydrological response of a catchment to an external forcing such as rainfall. Near-surface electromagnetic induction (EMI) sensors that measure the soil apparent electrical conductivity (ECa) provide a fast and non-invasive means for characterizing this response at the field or catchment scale through high-resolution time-lapse mapping. Here we show how ECa maps, obtained before and after an intense rainfall event of 125 mm h-1, elucidate differences in soil moisture patterns and hydrologic response of an experimental field as a consequence of differed soil management. The dryland field (Vertisol) was located in SW Spain and cropped with a typical wheat-sunflower-legume rotation. Both, near-surface and subsurface ECa (ECas and ECad, respectively), were measured using the EM38-DD EMI sensor in a mobile configuration. Raw ECa measurements and Mean Relative Differences (MRD) provided information on soil moisture patterns while time-lapse maps were used to evaluate the hydrologic response of the field. ECa maps of the field, measured before and after the rainfall event showed similar patterns. The field depressions where most of water and sediments accumulated had the highest ECa and MRD values. The SE-oriented soil, which was deeper and more exposed to sun and wind, showed the lowest ECa and MRD. The largest differences raised in the central part of the field where a high ECa and MRD area appeared after the rainfall event as a consequence of the smaller soil depth and a possible subsurface flux concentration. Time-lapse maps of both ECa and MRD were also similar. The direct drill plots showed higher increments of ECa and MRD as a result of the smaller runoff production. Time-lapse ECa increments showed a bimodal distribution differentiating clearly the direct drill from the conventional and minimum tillage plots. However this kind of distribution could not be shown using MRD differences since they come from standardized distributions. Field-extend time-lapse ECa maps can provide useful images of the hydrological response of agricultural fields which can be used to evaluate different soil management strategies or to aid the assessment of biogeochemical fluxes at the field scale.

Time Lapse Electrical Resistivity to Connect Evapotranspiration and Groundwater Fluxes in the Critical Zone

NASA Astrophysics Data System (ADS)

Jarvis, S. K.; Harmon, R. E.; Barnard, H. R.; Randall, J.; Singha, K.

2017-12-01

The critical zone (CZ)—an open system extending from canopy top to the base of groundwater—is a highly dynamic and heterogeneous environment. In forested terrain, trees make up a large component of the CZ. This work aims to quantify the connection between vegetation and subsurface water storage at a hillslope scale within a forested watershed in the H.J. Andrews Experimental Forest, Oregon. To identify the mechanism(s) controlling the connection at the hillslope scale, we observe patterns in electrical conductivity using 2D-time lapse-DC resistivity. To compare inversions through time a representative error model was determined using L-curve criterion. Inverted data show high spatial variability in ground electrical conductivity and variation at both diel and seasonal timescales. These changes are most pronounced in areas corresponding to dense vegetation. The diel pattern in electrical conductivity is also observed in monitored sap flow sensors, water-level gauges, tensiometers, and sediment thermal probes. To quantify the temporal connection between these data over the course of the growing season a cross correlation analysis was conducted. Preliminary data show that over the course of the growing season transpiration becomes decoupled from both groundwater and soil moisture. Further decomposition of the inverted time lapse data will highlight spatial variability in electrical conductivity providing insight into the where, when, and how(s) of tree-modified subsurface storage.

PFLOTRAN-E4D: A parallel open source PFLOTRAN module for simulating time-lapse electrical resistivity data

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Hammond, Glenn E.; Chen, Xingyuan

Time-lapse electrical resistivity tomography (ERT) is finding increased application for remotely monitoring processes occurring in the near subsurface in three-dimensions (i.e. 4D monitoring). However, there are few codes capable of simulating the evolution of subsurface resistivity and corresponding tomographic measurements arising from a particular process, particularly in parallel and with an open source license. Herein we describe and demonstrate an electrical resistivity tomography module for the PFLOTRAN subsurface simulation code, named PFLOTRAN-E4D. The PFLOTRAN-E4D module operates in parallel using a dedicated set of compute cores in a master-slave configuration. At each time step, the master processes receives subsurface states frommore » PFLOTRAN, converts those states to bulk electrical conductivity, and instructs the slave processes to simulate a tomographic data set. The resulting multi-physics simulation capability enables accurate feasibility studies for ERT imaging, the identification of the ERT signatures that are unique to a given process, and facilitates the joint inversion of ERT data with hydrogeological data for subsurface characterization. PFLOTRAN-E4D is demonstrated herein using a field study of stage-driven groundwater/river water interaction ERT monitoring along the Columbia River, Washington, USA. Results demonstrate the complex nature of changes subsurface electrical conductivity, in both the saturated and unsaturated zones, arising from water table changes and from river water intrusion into the aquifer. The results also demonstrate the sensitivity of surface based ERT measurements to those changes over time. PFLOTRAN-E4D is available with the PFLOTRAN development version with an open-source license at https://bitbucket.org/pflotran/pflotran-dev .« less

PFLOTRAN-E4D: A parallel open source PFLOTRAN module for simulating time-lapse electrical resistivity data

NASA Astrophysics Data System (ADS)

Johnson, Timothy C.; Hammond, Glenn E.; Chen, Xingyuan

2017-02-01

Time-lapse electrical resistivity tomography (ERT) is finding increased application for remotely monitoring processes occurring in the near subsurface in three-dimensions (i.e. 4D monitoring). However, there are few codes capable of simulating the evolution of subsurface resistivity and corresponding tomographic measurements arising from a particular process, particularly in parallel and with an open source license. Herein we describe and demonstrate an electrical resistivity tomography module for the PFLOTRAN subsurface flow and reactive transport simulation code, named PFLOTRAN-E4D. The PFLOTRAN-E4D module operates in parallel using a dedicated set of compute cores in a master-slave configuration. At each time step, the master processes receives subsurface states from PFLOTRAN, converts those states to bulk electrical conductivity, and instructs the slave processes to simulate a tomographic data set. The resulting multi-physics simulation capability enables accurate feasibility studies for ERT imaging, the identification of the ERT signatures that are unique to a given process, and facilitates the joint inversion of ERT data with hydrogeological data for subsurface characterization. PFLOTRAN-E4D is demonstrated herein using a field study of stage-driven groundwater/river water interaction ERT monitoring along the Columbia River, Washington, USA. Results demonstrate the complex nature of subsurface electrical conductivity changes, in both the saturated and unsaturated zones, arising from river stage fluctuations and associated river water intrusion into the aquifer. The results also demonstrate the sensitivity of surface based ERT measurements to those changes over time. PFLOTRAN-E4D is available with the PFLOTRAN development version with an open-source license at https://bitbucket.org/pflotran/pflotran-dev.

Geophysical Monitoring Methods Evaluation for the FutureGen 2.0 Project

DOE PAGES

Strickland, Chris E.; USA, Richland Washington; Vermeul, Vince R.; ...

2014-12-31

A comprehensive monitoring program will be needed in order to assess the effectiveness of carbon sequestration at the FutureGen 2.0 carbon capture and storage (CCS) field-site. Geophysical monitoring methods are sensitive to subsurface changes that result from injection of CO 2 and will be used for: (1) tracking the spatial extent of the free phase CO 2 plume, (2) monitoring advancement of the pressure front, (3) identifying or mapping areas where induced seismicity occurs, and (4) identifying and mapping regions of increased risk for brine or CO 2 leakage from the reservoir. Site-specific suitability and cost effectiveness were evaluated formore » a number of geophysical monitoring methods including: passive seismic monitoring, reflection seismic imaging, integrated surface deformation, time-lapse gravity, pulsed neutron capture logging, cross-borehole seismic, electrical resistivity tomography, magnetotellurics and controlled source electromagnetics. The results of this evaluation indicate that CO 2 injection monitoring using reflection seismic methods would likely be difficult at the FutureGen 2.0 site. Electrical methods also exhibited low sensitivity to the expected CO 2 saturation changes and would be affected by metallic infrastructure at the field site. Passive seismic, integrated surface deformation, time-lapse gravity, and pulsed neutron capture monitoring were selected for implementation as part of the FutureGen 2.0 storage site monitoring program.« less

Geophysical Monitoring Methods Evaluation for the FutureGen 2.0 Project

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strickland, Chris E.; USA, Richland Washington; Vermeul, Vince R.

A comprehensive monitoring program will be needed in order to assess the effectiveness of carbon sequestration at the FutureGen 2.0 carbon capture and storage (CCS) field-site. Geophysical monitoring methods are sensitive to subsurface changes that result from injection of CO 2 and will be used for: (1) tracking the spatial extent of the free phase CO 2 plume, (2) monitoring advancement of the pressure front, (3) identifying or mapping areas where induced seismicity occurs, and (4) identifying and mapping regions of increased risk for brine or CO 2 leakage from the reservoir. Site-specific suitability and cost effectiveness were evaluated formore » a number of geophysical monitoring methods including: passive seismic monitoring, reflection seismic imaging, integrated surface deformation, time-lapse gravity, pulsed neutron capture logging, cross-borehole seismic, electrical resistivity tomography, magnetotellurics and controlled source electromagnetics. The results of this evaluation indicate that CO 2 injection monitoring using reflection seismic methods would likely be difficult at the FutureGen 2.0 site. Electrical methods also exhibited low sensitivity to the expected CO 2 saturation changes and would be affected by metallic infrastructure at the field site. Passive seismic, integrated surface deformation, time-lapse gravity, and pulsed neutron capture monitoring were selected for implementation as part of the FutureGen 2.0 storage site monitoring program.« less

Mechatronical systems and experimental methods for investigations on tribology of electrical contacts

NASA Astrophysics Data System (ADS)

Franek, Friedrich; Neuhaus, Alexander; Reichart, Martin; Schrank, Clemens

2008-08-01

The investigation of electrical low power switching contacts, including dry-circuit, is characterized as a highly interdisciplinary research field. The knowledge of plasma physics, the influence of kinetics on contact phenomena, material science and metallurgy, as well as thermal aspects and tribology, is demanded. The methods usually used at the Austrian Center of Competence for Tribology are e.g. defined contact make and break along two-independent axis using model switches, high-resolution measurement of displacement and electrical values, including the detection of arcs, contact force measurement in the kHz and cN range (one-axis and two-axis systems), on-line optical investigations (especially time lapse movie systems), state of the art 3D surface topography measurement of eroded contact surfaces, and (electron-) microscopical evaluation of metallographic cross sections. Some aspects of this methodology are presented in this paper.

Assessing clogging processes caused by biofilm growth and organic particle accumulation in constructed wetlands using time-lapse electrical resistivity tomography method

NASA Astrophysics Data System (ADS)

Mahjoub, Himi; Tapias, Josefina C.; Lovera, Raúl; Rivero, Lluís; Font, Xavier; Casas, Albert

2016-04-01

Constructed wetlands for removing pollutants from wastewater in small communities are growing rapidly in many regions of the world. The advantages over conventional mechanical sanitation systems, where land availability is not a limiting factor, are low energy requirements, easy operation and maintenance, low sludge production and cost-effectivity. Nevertheless, with time the cleaning process can result in gradual clogging of the porous layer by suspended solids, bacterial film, chemical precipitates and compaction. The clogging development causes decrease of hydraulic conductivity, reduced oxygen supply and further leads to a rapid decrease of the treatment performance. As the investment involved in reversing clogging can represent a substantial fraction of the cost of a new system it is essential to assess in advance the evolution of clogging process and detect potential failures in the system. Since there is a lack of experiences for monitoring the functionality of constructed wetlands time-lapse electrical resistivity tomography studies have been conducted at horizontal sub-surface flow municipal wastewater treatment wetlands of Catalonia (Spain). The results of this research show that electrical resistivity tomography can be a very useful technique for assessing the extent of silting up processes that clog the subsurface flow constructed wetlands through the gravel layer. In the unsaturated zone, the electrical resistivity is greater at the end of the filter, since the pores contains air which is dielectric, while at the beginning of the filter the resistivity is lower because the electrical conduction of organic matter around the mineral grains. Conversely, in the saturated zone, the electrical resistivity is lower at the end of the filter, since pores contain a higher proportion of high ionic conductivity wastewater, while at the beginning of the filter the electrical resistivity is higher because of the lower porosity due to the clogging process.

Time-lapse processing of 2D seismic profiles with testing of static correction methods at the CO2 injection site Ketzin (Germany)

NASA Astrophysics Data System (ADS)

Bergmann, Peter; Yang, Can; Lüth, Stefan; Juhlin, Christopher; Cosma, Calin

2011-09-01

The Ketzin project provides an experimental pilot test site for the geological storage of CO2. Seismic monitoring of the Ketzin site comprises 2D and 3D time-lapse experiments with baseline experiments in 2005. The first repeat 2D survey was acquired in 2009 after 22 kt of CO2 had been injected into the Stuttgart Formation at approximately 630 m depth. Main objectives of the 2D seismic surveys were the imaging of geological structures, detection of injected CO2, and comparison with the 3D surveys. Time-lapse processing highlighted the importance of detailed static corrections to account for travel time delays, which are attributed to different near-surface velocities during the survey periods. Compensation for these delays has been performed using both pre-stack static corrections and post-stack static corrections. The pre-stack method decomposes the travel time delays of baseline and repeat datasets in a surface consistent manner, while the latter cross-aligns baseline and repeat stacked sections along a reference horizon. Application of the static corrections improves the S/N ratio of the time-lapse sections significantly. Based on our results, it is recommended to apply a combination of both corrections when time-lapse processing faces considerable near-surface velocity changes. Processing of the datasets demonstrates that the decomposed solution of the pre-stack static corrections can be used for interpretation of changes in near-surface velocities. In particular, the long-wavelength part of the solution indicates an increase in soil moisture or a shallower groundwater table in the repeat survey. Comparison with the processing results of 2D and 3D surveys shows that both image the subsurface, but with local variations which are mainly associated to differences in the acquisition geometry and source types used. Interpretation of baseline and repeat stacks shows that no CO2 related time-lapse signature is observable where the 2D lines allow monitoring of the reservoir. This finding is consistent with the time-lapse results of the 3D surveys, which show an increase in reflection amplitude centered around the injection well. To further investigate any potential CO2 signature, an amplitude versus offset (AVO) analysis was performed. The time-lapse analysis of the AVO does not indicate the presence of CO2, as expected, but shows signs of a pressure response in the repeat data.

Impact of small-scale saline tracer heterogeneity on electrical resistivity monitoring in fully and partially saturated porous media: Insights from geoelectrical milli-fluidic experiments

NASA Astrophysics Data System (ADS)

Jougnot, Damien; Jiménez-Martínez, Joaquín; Legendre, Raphaël; Le Borgne, Tanguy; Méheust, Yves; Linde, Niklas

2018-03-01

Time-lapse electrical resistivity tomography (ERT) is a geophysical method widely used to remotely monitor the migration of electrically-conductive tracers and contaminant plumes in the subsurface. Interpretations of time-lapse ERT inversion results are generally based on the assumption of a homogeneous solute concentration below the resolution limits of the tomogram depicting inferred electrical conductivity variations. We suggest that ignoring small-scale solute concentration variability (i.e., at the sub-resolution scale) is a major reason for the often-observed apparent loss of solute mass in ERT tracer studies. To demonstrate this, we developed a geoelectrical milli-fluidic setup where the bulk electric conductivity of a 2D analogous porous medium, consisting of cylindrical grains positioned randomly inside a Hele-Shaw cell, is monitored continuously in time while saline tracer tests are performed through the medium under fully and partially saturated conditions. High resolution images of the porous medium are recorded with a camera at regular time intervals, and provide both the spatial distribution of the fluid phases (aqueous solution and air), and the saline solute concentration field (where the solute consists of a mixture of salt and fluorescein, the latter being used as a proxy for the salt concentration). Effective bulk electrical conductivities computed numerically from the measured solute concentration field and the spatial distributions of fluid phases agree well with the measured bulk conductivities. We find that the effective bulk electrical conductivity is highly influenced by the connectivity of high electrical conductivity regions. The spatial distribution of air, saline tracer fingering, and mixing phenomena drive temporal changes in the effective bulk electrical conductivity by creating preferential paths or barriers for electrical current at the pore-scale. The resulting heterogeneities in the solute concentrations lead to strong anisotropy of the effective bulk electrical conductivity, especially for partially saturated conditions. We highlight how these phenomena contribute to the typically large apparent mass loss observed when conducting field-scale time-lapse ERT.

Monitoring CO 2 Storage at Cranfield, Mississippi with Time-Lapse Offset VSP – Using Integration and Modeling to Reduce Uncertainty

DOE PAGES

Daley, Thomas M.; Hendrickson, Joel; Queen, John H.

2014-12-31

A time-lapse Offset Vertical Seismic Profile (OVSP) data set was acquired as part of a subsurface monitoring program for geologic sequestration of CO 2. The storage site at Cranfield, near Natchez, Mississippi, is part of a detailed area study (DAS) site for geologic carbon sequestration operated by the U.S. Dept. of Energy’s Southeast Regional Carbon Sequestration Partnership (SECARB). The DAS site includes three boreholes, an injection well and two monitoring wells. The project team selected the DAS site to examine CO 2 sequestration multiphase fluid flow and pressure at the interwell scale in a brine reservoir. The time-lapse (TL) OVSPmore » was part of an integrated monitoring program that included well logs, crosswell seismic, electrical resistance tomography and 4D surface seismic. The goals of the OVSP were to detect the CO 2 induced change in seismic response, give information about the spatial distribution of CO 2 near the injection well and to help tie the high-resolution borehole monitoring to the 4D surface data. The VSP data were acquired in well CFU 31-F1, which is the ~3200 m deep CO 2 injection well at the DAS site. A preinjection survey was recorded in late 2009 with injection beginning in December 2009, and a post injection survey was conducted in Nov 2010 following injection of about 250 kT of CO 2. The sensor array for both surveys was a 50-level, 3-component, Sercel MaxiWave system with 15 m (49 ft) spacing between levels. The source for both surveys was an accelerated weight drop, with different source trucks used for the two surveys. Consistent time-lapse processing was applied to both data sets. Time-lapse processing generated difference corridor stacks to investigate CO 2 induced reflection amplitude changes from each source point. Corridor stacks were used for amplitude analysis to maximize the signal-to-noise ratio (S/N) for each shot point. Spatial variation in reflectivity (used to ‘map’ the plume) was similar in magnitude to the corridor stacks but, due to relatively lower S/N, the results were less consistent and more sensitive to processing and therefore are not presented. We examined the overall time-lapse repeatability of the OVSP data using three methods, the NRMS and Predictability (Pred) measures of Kragh and Christie (2002) and the signal-to-distortion ratio (SDR) method of Cantillo (2011). Because time-lapse noise was comparable to the observed change, multiple methods were used to analyze data reliability. The reflections from the top and base reservoir were identified on the corridor stacks by correlation with a synthetic response generated from the well logs. A consistent change in the corridor stack amplitudes from pre- to post-CO 2 injection was found for both the top and base reservoir reflections on all ten shot locations analyzed. In addition to the well-log synthetic response, a finite-difference elastic wave propagation model was built based on rock/fluid properties obtained from well logs, with CO 2 induced changes guided by time-lapse crosswell seismic tomography (Ajo-Franklin, et al., 2013) acquired at the DAS site. Time-lapse seismic tomography indicated that two reservoir zones were affected by the flood. The modeling established that interpretation of the VSP trough and peak event amplitudes as reflectivity from the top and bottom of reservoir is appropriate even with possible tuning effects. Importantly, this top/base change gives confidence in an interpretation that these changes arise from within the reservoir, not from bounding lithology. The modeled time-lapse change and the observed field data change from 10 shotpoints are in agreement for both magnitude and polarity of amplitude change for top and base of reservoir. Therefore, we conclude the stored CO 2 has been successfully detected and, furthermore, the observed seismic reflection change can be applied to Cranfield’s 4D surface seismic for spatially delineating the CO 2/brine interface.« less

Effect of Forest Age on Rainwater Infiltration in the Lowland Humid Tropics

NASA Astrophysics Data System (ADS)

Kempema, E. W.; Mojica, A.; Litt, G.; Carey, A. M.; Ogden, F. L.

2015-12-01

We are working in the headwaters of the Rio Agua Salud catchment in central Panama to test the hypothesis that varying land uses, including time since afforestation, have significant impacts on rainfall infiltration, runoff generation and groundwater recharge. Increased infiltration and groundwater recharge during the wet season may result in increased groundwater flow during the dry season, the "sponge effect hypothesis". We irrigate a 6m by 2m test plot with slightly saline water at varying applied rainfall intensities using an ARS-type rainfall simulator, which has an oscillating boom mounted 2m above the forest floor, and four spray nozzles. We install 10cm tall lawn edging at the bottom of the test plot to direct surface water runoff to a small flume where runoff rates are recorded over time. In addition, we use time lapse ERI (electrical resistivity imaging) to map the vertical and downslope flow paths. We add NaCl to the applied water at a concentration of 200 mg/l, tagged with 10 mg/l LiBr as a salinity/conductivity contrast. Because ERI is highly sensitivity to changes in the electrical conductivity of soils and solute, we obtain a clear time-lapse image of flow path and bulk flow velocities. In this presentation we compare and contrast results of observations collected in an actively grazed cattle pasture adjacent ~10-12 year and >25 year old secondary forest plots using data collected during the 2015 wet season.

Surface time-lapse electrical resistivity tomography (TLERT) monitoring of an SRS injection and associated biogeochemical processes, Oak Ridge National Laboratory, Tennessee USA

NASA Astrophysics Data System (ADS)

Baker, G. S.; Wu, Y.; Hubbard, S. S.; Wu, W.; Gaines, D. P.; Pratt, J. C.; Modi, A. L.; Watson, D.; Jardine, P.

2009-05-01

We present results from surface time-lapse electrical resistivity tomography (TLERT) data collected within a uranium-contaminated unconfined aquifer underlying the Oak Ridge Field Research Center (ORFRC) located at the Oak Ridge National Laboratory (ORNL) in Tennessee. As part of an Integrated Field Research Challenge (IFRC) project supported by the DOE Environmental Remediation Sciences Program (ERSP), bioreduction of U(VI) to U(IV) with ethanol as an electron donor has been tested during the last four years. Low U concentration (below US EPA MCL of 0.03 mg/L) can be achieved by frequent injection of electron donor. To reduce the costs and improve the sustainability for remediation and site maintenance, our IFRC team is exploring the effectiveness of a slowly degrading substrate such as commercial emulsified vegetable oil substrate (EVO) as alternative electron donor sources. Laboratory batch and flow-through column experiments were carried out to investigate the sensitivity of various physical properties (e.g., electrical conductivity) to EVO injection to test the applicability of geophysics as a monitoring tool at the field scale. Results revealed increased electrical conductivity during both EVO injection and subsequent degradation of surfactant with an overall increase in conductivity of ˜35%; thus, surface TLERT was selected as a monitoring tool to supplement well fluid samples. The field stimulation test began at Area 2 during early February 2009. Prior to the injection of the EVO, preliminary characterization completed, including a geochemical survey of the ground water from ˜50 wells, microbial samples of groundwater and sediment collected from selected wells, and site hydrology characterized by bromide tracer test and surface ERT methods. On February 9, 2009, diluted EVO solution (20% concentration, 900 gal vol) was injected into three injection wells within 1.5 hours. Distribution of the injected EVO and accompanying biogeochemical processes has been monitored since injection through analysis of numerous well fluid samples and TLERT data from 2 profiles. Initial TLERT data were collected at the 2 profiles over a two-week period at 12 different time steps. The surface profiles, situated parallel to and perpendicular to the major flow direction (as delineated by tracer tests), are each 40 m long and consist of 52 electrodes spaced at 0.75 m. Initial analysis indicate good correlation between well fluid samples and TLERT data and allow for improved extrapolation of well data to the field scale. Long-term monitoring is in place to track the continuing hydrologic dynamics and reduction duration in this test area throughout Spring 2009.

Correlation-based static correction of 4D seismic data with a demonstration at the Ketzin CO2 storage site, Germany

NASA Astrophysics Data System (ADS)

Bergmann, P.; Kashubin, A.; Ivandic, M.; Lueth, S.; Juhlin, C.

2013-12-01

Statics are time-shifts that occur in reflection seismic trace data and are generally considered to be mainly due to shallow velocity variations. Since the refraction static correction is most often based on first break picking and subsequent velocity model estimation, it is even today a labor-consuming and error-prone procedure. Time-lapse seismic also faces this issue in a temporal sense, since changes in statics, due to temporally variable near-surface conditions, are known to be first-order contributors to time-lapse noise. Considerable changes in the statics of repeated on-shore seismic surveys can occur due to precipitation-related changes in soil moisture and in the groundwater table, or may be due to man-made earthworks. Production-related or injection-related processes can cause considerable velocity changes, which leave time-shift imprints on time-lapse seismic data that can be very similar to that of near-surface velocity variations. In this context it is crucial to consider that refraction static corrections are in many cases of limited use, as they aim to enhance the stack coherency of the individual time-lapse data sets only. As an alternative, we propose a time-lapse difference (TLD) static correction that is focused on the accommodation of static changes between the time-lapse data sets. This TLD static correction decomposes the static differences that are determined from cross-correlations in a surface-consistent manner. It therefore does not require first break picking and inversion for velocities from repeat data sets. We tested the TLD static correction for a 4D case study from the Ketzin CO2 storage site, Germany. As a reference we used the results that were obtained from a recent processing in which refraction static corrections were performed individually on the time-lapse data sets. Although the TLD static corrections method is considerably less time-consuming, we found that it is providing a stack difference with enhanced S/N. This is particularly demonstrated for a 4D seismic signature that is proven to be due to injected CO2. This Ketzin case study shows further that the pattern of the TLD statics is highly consistent with patterns in the cumulative precipitation data. This observation confirms that near-surface velocity changes are due to changes in the soil-moisture saturation and that an efficient compensation for them can be achieved by the TLD static correction.

Imaging hydrological processes in headwater riparian seeps with time-lapse electrical resistivity

USDA-ARS?s Scientific Manuscript database

The activation of subsurface seepage in response to precipitation events represents a potentially important pathway of nitrogen (N) delivery to streams in agricultural catchments. We used electrical resistivity imaging (ERI) and shallow piezometers to elucidate how seep and non-seep areas within the...

Time-lapse 3D imaging of calcite precipitation in a microporous column

NASA Astrophysics Data System (ADS)

Godinho, Jose R. A.; Withers, Philip J.

2018-02-01

Time-lapse X-ray computed tomography is used to image the evolution of calcite precipitation during flow through microporous quartz over the course of 400 h. The growth rate decreases by more than seven times, which is linked to the clogging of flow paths that restricts flow to some regions of the column. Fewer precipitates are observed as a function of column depth, which is found to be related to a differential nucleation density along the sample. A higher nucleation density closer to the inlet implies more crystal volume increase per unit of time without affecting the rate if normalized to the surface area of crystals. Our overall growth rates measured in porous media are orders of magnitude slower than growth rates derived from traditional precipitation experiments on free surfaces. Based on our time-lapse results we hypothesize a scenario where the evolving distribution of precipitates within a pore structure during precipitation progressively modifies the local transport through the pores. Within less permeable regions the saturation index may be lower than along the main flow paths. Therefore, the reactive crystal surfaces within those regions grow at a slower rate than that expected from the bulk fluid composition. Since the amount of reactive surface area within these less permeable regions increases over time, the overall growth rate decreases without a necessary significant change of the bulk fluid composition along more permeable flow paths. In conclusion, the overall growth rates in an evolving porous media expected from bulk fluid compositions alone can be overestimated due to the development of stagnant sub-regions where the reactive surface area is bath by a solution with lower saturation index. In this context we highlight the value of time-lapse 3D studies for understanding the dynamics of mineral precipitation in porous media.

Estimating spatial variations in water content of clay soils from time-lapse electrical conductivity surveys

USDA-ARS?s Scientific Manuscript database

Soil water content (theta) is one of the most important drivers for many biogeochemical fluxes at different temporal and spatial scales. Hydrogeophysical non-invasive sensors that measure the soil apparent electrical conductivity (ECa) have been widely used to infer spatial and temporal patterns of...

Strategies for improving the resolution of electrical and electromagnetic geophysical measurements for three-dimensional inverse modeling of CO2 movement

NASA Astrophysics Data System (ADS)

Commer, M.; Kowalsky, M. B.; Dafflon, B.; Wu, Y.; Hubbard, S. S.

2013-12-01

Geologic carbon sequestration is being evaluated as a means to mitigate the effects of greenhouse gas emissions. Efforts are underway to identify adequate reservoirs and to evaluate the behavior of injected CO2 over time; time-lapse geophysical methods are considered effective tools for these purposes. Pilot studies have shown that the invasion of CO2 into a background pore fluid can alter the electrical resistivity, with increases from CO2 in the super-critical or gaseous phase, and decreases from CO2 dissolved in groundwater (especially when calcite dissolution is occurring). Because of their sensitivity to resistivity changes, electrical and electromagnetic (EM) methods have been used in such studies for indirectly assessing CO2 saturation changes. While the electrical resistance tomography (ERT) method is a well-established technique for both crosswell and surface applications, its usefulness is limited by the relatively low-resolution information it provides. Controlled-source EM methods, including both frequency-domain and time-domain (transient EM) methods, can offer improved resolution. We report on three studies that aim to maximize the information content of electrical and electromagnetic measurements in inverse modeling applications that target the monitoring of resistivity changes due to CO2 migration and/or leakage. The first study considers a three-dimensional crosswell data set collected at an analogue site used for investigating CO2 distribution and geochemical reactivity within a shallow formation. We invert both resistance and phase data using a gradient-weighting method for descent-based inversion algorithms. This method essentially steers the search direction in the model space using low-cost non-linear conjugate gradient methods towards the more computationally expensive Gauss-Newton direction. The second study involves ERT data that were collected at the SECARB Cranfield site near Natchez, Mississippi, at depths exceeding 3000 m. We employ a ratio data inversion scheme, where the time-lapse input data are given by the measured ERT data normalized by their baseline values. We investigate whether three-dimensional time-lapse inversions yield improved results compared to two-dimensional results that were previously reported. Finally, we present a synthetic study that investigates a novel time-domain controlled-source EM method that has the potential for exploiting the resolution properties of vertically oriented source antennas while avoiding their logistical difficulties. A vertical source is replaced by an array of multiple horizontal dipoles arranged in a circle such that all dipoles have a common endpoint in the center. Overall, this study presents significant advances in developing adequate geophysical techniques to monitor CO2 migration and/or potential leaks in geological reservoirs.

Using Digital Time-Lapse Videos to Teach Geomorphic Processes to Undergraduates

NASA Astrophysics Data System (ADS)

Clark, D. H.; Linneman, S. R.; Fuller, J.

2004-12-01

We demonstrate the use of relatively low-cost, computer-based digital imagery to create time-lapse videos of two distinct geomorphic processes in order to help students grasp the significance of the rates, styles, and temporal dependence of geologic phenomena. Student interviews indicate that such videos help them to understand the relationship between processes and landform development. Time-lapse videos have been used extensively in some sciences (e.g., biology - http://sbcf.iu.edu/goodpract/hangarter.html, meteorology - http://www.apple.com/education/hed/aua0101s/meteor/, chemistry - http://www.chem.yorku.ca/profs/hempsted/chemed/home.html) to demonstrate gradual processes that are difficult for many students to visualize. Most geologic processes are slower still, and are consequently even more difficult for students to grasp, yet time-lapse videos are rarely used in earth science classrooms. The advent of inexpensive web-cams and computers provides a new means to explore the temporal dimension of earth surface processes. To test the use of time-lapse videos in geoscience education, we are developing time-lapse movies that record the evolution of two landforms: a stream-table delta and a large, natural, active landslide. The former involves well-known processes in a controlled, repeatable laboratory experiment, whereas the latter tracks the developing dynamics of an otherwise poorly understood slope failure. The stream-table delta is small and grows in ca. 2 days; we capture a frame on an overhead web-cam every 3 minutes. Before seeing the video, students are asked to hypothesize how the delta will grow through time. The final time-lapse video, ca. 20-80 MB, elegantly shows channel migration, progradation rates, and formation of major geomorphic elements (topset, foreset, bottomset beds). The web-cam can also be "zoomed-in" to show smaller-scale processes, such as bedload transfer, and foreset slumping. Post-lab tests and interviews with students indicate that these time-lapse videos significantly improve student interest in the material, and comprehension of the processes. In contrast, the natural landslide is relatively unconstrained, and its processes of movement, both gradual and catastrophic, are essentially impossible to observe directly without the aid of time-lapse imagery. We are constructing a remote digital camera, mounted in a tree, which will capture 1-2 photos/day of the toe. The toe is extremely active geomorphically, and the time-lapse movie should help us (and the students) to constrain the style, frequency, and rates of movement, surface slumping, and debris-flow generation. Because we have also installed a remote weather station on the landslide, we will be able to test the links between these processes and local climate conditions.

Electrical resistivity tomography as monitoring tool for unsaturated zone transport: an example of preferential transport of deicing chemicals.

PubMed

Wehrer, Markus; Lissner, Heidi; Bloem, Esther; French, Helen; Totsche, Kai Uwe

2014-01-01

Non-invasive spatially resolved monitoring techniques may hold the key to observe heterogeneous flow and transport behavior of contaminants in soils. In this study, time-lapse electrical resistivity tomography (ERT) was employed during an infiltration experiment with deicing chemical in a small field lysimeter. Deicing chemicals like potassium formate, which frequently impact soils on airport sites, were infiltrated during snow melt. Chemical composition of seepage water and the electrical response was recorded over the spring period 2010. Time-lapse electrical resistivity tomographs are able to show the infiltration of the melt water loaded with ionic constituents of deicing chemicals and their degradation product hydrogen carbonate. The tomographs indicate early breakthrough behavior in parts of the profile. Groundtruthing with pore fluid conductivity and water content variations shows disagreement between expected and observed bulk conductivity. This was attributed to the different sampling volume of traditional methods and ERT due to a considerable fraction of immobile water in the soil. The results show that ERT can be used as a soil monitoring tool on airport sites if assisted by common soil monitoring techniques.

Lapse-time-dependent coda-wave depth sensitivity to local velocity perturbations in 3-D heterogeneous elastic media

NASA Astrophysics Data System (ADS)

Obermann, Anne; Planès, Thomas; Hadziioannou, Céline; Campillo, Michel

2016-10-01

In the context of seismic monitoring, recent studies made successful use of seismic coda waves to locate medium changes on the horizontal plane. Locating the depth of the changes, however, remains a challenge. In this paper, we use 3-D wavefield simulations to address two problems: first, we evaluate the contribution of surface- and body-wave sensitivity to a change at depth. We introduce a thin layer with a perturbed velocity at different depths and measure the apparent relative velocity changes due to this layer at different times in the coda and for different degrees of heterogeneity of the model. We show that the depth sensitivity can be modelled as a linear combination of body- and surface-wave sensitivity. The lapse-time-dependent sensitivity ratio of body waves and surface waves can be used to build 3-D sensitivity kernels for imaging purposes. Second, we compare the lapse-time behaviour in the presence of a perturbation in horizontal and vertical slabs to address, for instance, the origin of the velocity changes detected after large earthquakes.

Spatiotemporal monitoring of soil water content profiles in an irrigated field using probabilistic inversion of time-lapse EMI data

NASA Astrophysics Data System (ADS)

Moghadas, Davood; Jadoon, Khan Zaib; McCabe, Matthew F.

2017-12-01

Monitoring spatiotemporal variations of soil water content (θ) is important across a range of research fields, including agricultural engineering, hydrology, meteorology and climatology. Low frequency electromagnetic induction (EMI) systems have proven to be useful tools in mapping soil apparent electrical conductivity (σa) and soil moisture. However, obtaining depth profile water content is an area that has not been fully explored using EMI. To examine this, we performed time-lapse EMI measurements using a CMD mini-Explorer sensor along a 10 m transect of a maize field over a 6 day period. Reference data were measured at the end of the profile via an excavated pit using 5TE capacitance sensors. In order to derive a time-lapse, depth-specific subsurface image of electrical conductivity (σ), we applied a probabilistic sampling approach, DREAM(ZS) , on the measured EMI data. The inversely estimated σ values were subsequently converted to θ using the Rhoades et al. (1976) petrophysical relationship. The uncertainties in measured σa, as well as inaccuracies in the inverted data, introduced some discrepancies between estimated σ and reference values in time and space. Moreover, the disparity between the measurement footprints of the 5TE and CMD Mini-Explorer sensors also led to differences. The obtained θ permitted an accurate monitoring of the spatiotemporal distribution and variation of soil water content due to root water uptake and evaporation. The proposed EMI measurement and modeling technique also allowed for detecting temporal root zone soil moisture variations. The time-lapse θ monitoring approach developed using DREAM(ZS) thus appears to be a useful technique to understand spatiotemporal patterns of soil water content and provide insights into linked soil moisture vegetation processes and the dynamics of soil moisture/infiltration processes.

Highlights from the SoilCAM project: Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring

NASA Astrophysics Data System (ADS)

French, H. K.; van der Zee, S. E. A. T. M.; Wehrer, M.; Godio, A.; Pedersen, L. B.; Toscano, G.

2012-04-01

The SoilCAM project (Soil Contamination, Advanced integrated characterisation and time-lapse Monitoring 2008-2012, EU-FP7-212663) is aimed at improving current methods for monitoring contaminant distribution and biodegradation in the subsurface. At two test sites, Oslo airport Gardermoen in Norway and the Trecate site in Italy, a number of geophysical techniques, lysimeter and other soil and water sampling techniques as well as numerical flow and transport modelling have been combined at different scales in order to characterise flow transport processes in the unsaturated and saturated zones. Laboratory experiments have provided data on physical and bio-geo-chemical parameters for use in models and to select remediation methods. The geophysical techniques were used to map geological heterogeneities and also conduct time-lapse measurements of processes in the unsaturated zone. Both cross borehole and surface electrodes were used for electrical resistivity and induced polarisation surveys. The geophysical surveys showed clear indications of areas highly affected by de-icing chemicals along the runway at Oslo airport. The time lapse measurements along the runway at the airport show infiltration patterns during snowmelt and are used to validate 2D unsaturated flow and transport simulations using SUTRA. The Orchestra model is used to describe the complex interaction between bio-geo-chemical processes in a 1D profile along the runway. The presence of installations such as a membrane along the runway highly affects the flow pattern and challenges the capacity of the numerical code. Smaller scale field site measurements have revealed the increase of iron and manganese during degradation of de-icing chemicals. The use of Nitrate to increase red-ox potential was tested, but results have not been analysed yet. So far it cannot be concluded that degradation process can be quantified indirectly by geophysical monitoring. At the Trecate site a combination of georadar, electrical resistivity and radio magneto telluric provided a broad outline of the geology down to 50 m, there is a good consistency in the data in the overlapping part, and more deep samples would be required to validate the geological interpretation of the data. Anomalies in the Induced polarisation and electrical resistivity data from the cross borehole measurements indicate where the remaining crude oil can be found. Water samples from multilevel samplers reveal crude oil present in emulsion in the zone of groundwater fluctuations, highlighting the importance of colloidal transport. Geochemistry of the groundwater clearly indicates degradation of hydrocarbons under iron- and sulphate reducing conditions. Modflow has been used to simulate the regional groundwater flow and transport in the area. An overview of the work that has been conducted and main highlights of the results so far will be presented.

Integrating Terrestrial Time-Lapse Photography with Laser Scanning to Distinguish the Drivers of Movement at Sólheimajökull, Iceland

NASA Astrophysics Data System (ADS)

How, P.; James, M. R.; Wynn, P.

2014-12-01

Glacier movement is attributed to a sensitive configuration of driving forces. Here, we present an approach designed to evaluate the drivers of movement at Sólheimajökull, an outlet glacier from the Myrdalsjökull ice cap, Iceland, through combining terrestrial time-lapse photography and laser scanning (TLS). A time-lapse camera (a dSLR with intervalometer and solar-recharged battery power supply) collected hourly data over the summer of 2013. The data are subject to all the difficulties that are usually present in long time-lapse sequences, such as highly variable illumination and visibility conditions, evolving surfaces, and camera instabilities. Feature-tracking software [1] was used to: 1) track regions of static topography (e.g. the skyline) from which camera alignment could be continuously updated throughout the sequence; and 2) track glacial surface features for velocity estimation. Absolute georeferencing of the image sequence was carried out by registering the camera to a TLS survey acquired at the beginning of the monitoring period. A second TLS survey (July 2013) provided an additional 3D surface. By assuming glacial features moved in approximately planimetrically straight lines between the two survey dates, combining the two TLS surfaces with the monoscopic feature tracking allows 3D feature tracks to be derived. Such tracks will enable contributions from different drivers (e.g. surface melting) to be extracted, even in imagery that is acquired not perpendicular to glacier motion. At Sólheimajökull, our aim is to elucidate any volcanic contribution to the observed movement.[1] http://www.lancaster.ac.uk/staff/jamesm/software/pointcatcher.htm

Freeze core sampling to validate time-lapse resistivity monitoring of the hyporheic zone.

PubMed

Toran, Laura; Hughes, Brian; Nyquist, Jonathan; Ryan, Robert

2013-01-01

A freeze core sampler was used to characterize hyporheic zone storage during a stream tracer test. The pore water from the frozen core showed tracer lingered in the hyporheic zone after the tracer had returned to background concentration in collocated well samples. These results confirmed evidence of lingering subsurface tracer seen in time-lapse electrical resistivity tomographs. The pore water exhibited brine exclusion (ion concentrations in ice lower than source water) in a sediment matrix, despite the fast freezing time. Although freeze core sampling provided qualitative evidence of lingering tracer, it proved difficult to quantify tracer concentration because the amount of brine exclusion during freezing could not be accurately determined. Nonetheless, the additional evidence for lingering tracer supports using time-lapse resistivity to detect regions of low fluid mobility within the hyporheic zone that can act as chemically reactive zones of importance in stream health. © 2012, The Author(s). GroundWater © 2012, National Ground Water Association.

Time-lapse CO2 monitoring using ambient-noise seismic interferometry: a feasibility study from Ketzin, Germany

NASA Astrophysics Data System (ADS)

Boullenger, Boris; Verdel, Arie; Paap, Bob; Thorbecke, Jan; Draganov, Deyan

2015-04-01

Seismic interferometry applied to ambient-noise measurements allows retrieval of the Green's function between two seismic receivers, by cross-correlating their recordings, as if from a source at one of the receivers. We propose to use ambient-noise seismic interferometry (ANSI) to retrieve reflection data. The time-lapse differences between different vintages of the retrieved data may help characterize property changes within a geologic reservoir with varying CO2 saturation. We test the feasibility of this time-lapse passive seismic method with numerical experiments based on the CO2-storage site of Ketzin, Germany. Ambient-noise recordings from Ketzin exhibit significant passive body-wave energy (from natural tremors or induced seismicity in the vicinity of the reservoir), which is advantageous to retrieve reflections with ANSI. The ANSI numerical experiments aim to understand what the requirements are for the recorded body-wave noise to retrieve the time-lapse reflection signal caused by an increase of CO2 saturation in the reservoir. For this purpose, we design two velocity scenarios at Ketzin: a base scenario before the injection of CO2, and a repeat scenario corresponding to a P-wave velocity decline in the reservoir by 20 percent. For both scenarios, we simulate passive seismic experiments of body-wave noise recordings that may take several days or months to record in the field. The passive recordings are obtained by modelling global (direct wave, internal and surface multiples) transmission responses from band-limited subsurface noise sources, randomly triggered in space and time. The time-lapse reflection signal is obtained by taking the differences between the base and the repeat retrieved reflection data (virtual common-shot gathers). We found that the time-lapse signal is still recovered with ANSI even if the base and repeat retrieved reflection data are partially polluted with artifacts. This means that uneven illumination of the array does not necessarily exclude acceptable time-lapse signal retrieval. Furthermore, the clarity of the time-lapse signal at the reservoir level increases with increasing repeatability of the two passive experiments. The increase in repeatability is achieved when the contributing noise sources form denser clusters that share analogous spatial coverage. To support the merits of the numerical experiments, we applied ANSI (by auto-correlation) to three days of Ketzin passive field-data and compare the retrieved responses with the modelling results. The data are recorded at a permanent array of sensors (hydrophones and geophones) installed above the injection site. We used the records from the buried line of the array that consists of sensors lying at 50-meters depth. These records are less contaminated with surface noise and preserve passive body-wave events better than surface-recorded data. The retrieved responses exhibit significant correspondence with the existing active-seismic field data as well as with our modelled ANSI and active responses. Key reflection events seem to be retrieved at the expected arrival times and support the idea that the settings and characteristics of the ambient noise at Ketzin offer good potential for time-lapse ANSI to monitor CO2 sequestration.

Greenland outlet glacier dynamics from Extreme Ice Survey (EIS) photogrammetry

NASA Astrophysics Data System (ADS)

Hawbecker, P.; Box, J. E.; Balog, J. D.; Ahn, Y.; Benson, R. J.

2010-12-01

Time Lapse cameras fill gaps in our observational capabilities: 1. By providing much higher temporal resolution than offered by conventional airborne or satellite remote sensing. 2. While GPS or auto-theodolite observations can provide higher time resolution data than from photogrammetry, survival of these instruments on the hazardous glacier surface is limited, plus, the maintenance of such systems can be more expensive than the maintenance of a terrestrial photogrammetry installation. 3. Imagery provide a high spatial density of observations across the glacier surface, higher than is realistically available from GPS or other in-situ observations. 4. time lapse cameras provide observational capabilities in Eulerian and Lagrangian frames while GPS or theodolite targets, going along for a ride on the glacier, provide only Lagrangian data. Photogrammetry techniques are applied to a year-plus of images from multiple west Greenland glaciers to determine the glacier front horizontal velocity variations at hourly to seasonal time scales. The presentation includes comparisons between glacier front velocities and: 1. surface melt rates inferred from surface air temperature and solar radiation observations; 2. major calving events identified from camera images; 3. surface and near-surface ocean temperature; 4. land-fast sea ice breakup; 5. tidal variations; 6. supra-glacial melt lake drainage events observed in daily optical satellite imagery; and 7.) GPS data. Extreme Ice Survey (EIS) time lapse camera overlooking the Petermann glacier, installed to image glacier dynamics and to capture the predicted ice "island" detachment.

Tracking tracer breakthrough in the hyporheic zone using time‐lapse DC resistivity, Crabby Creek, Pennsylvania

USGS Publications Warehouse

Nyquist, Jonathan E.; Toran, Laura; Fang, Allison C.; Ryan, Robert J.; Rosenberry, Donald O.

2010-01-01

Characterization of the hyporheic zone is of critical importance for understanding stream ecology, contaminant transport, and groundwater‐surface water interaction. A salt water tracer test was used to probe the hyporheic zone of a recently re‐engineered portion of Crabby Creek, a stream located near Philadelphia, PA. The tracer solution was tracked through a 13.5 meter segment of the stream using both a network of 25 wells sampled every 5–15 minutes and time‐lapse electrical resistivity tomographs collected every 11 minutes for six hours, with additional tomographs collected every 100 minutes for an additional 16 hours. The comparison of tracer monitoring methods is of keen interest because tracer tests are one of the few techniques available for characterizing this dynamic zone, and logistically it is far easier to collect resistivity tomographs than to install and monitor a dense network of wells. Our results show that resistivity monitoring captured the essential shape of the breakthrough curve and may indicate portions of the stream where the tracer lingered in the hyporheic zone. Time‐lapse resistivity measurements, however, represent time averages over the period required to collect a tomographic data set, and spatial averages over a volume larger than captured by a well sample. Smoothing by the resistivity data inversion algorithm further blurs the resulting tomograph; consequently resistivity monitoring underestimates the degree of fine‐scale heterogeneity in the hyporheic zone.

Determination of water saturation using gas phase partitioning tracers and time-lapse electrical conductivity measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Oostrom, Martinus; Truex, Michael J.

2013-05-21

Water saturation is an important indicator of contaminant distribution and plays a governing role in contaminant transport within the vadose zone. Understanding the water saturation distribution is critical for both remediation and contaminant flux monitoring in unsaturated environments. In this work we propose and demonstrate a method of remotely determining water saturation levels using gas phase partitioning tracers and time-lapse bulk electrical conductivity measurements. The theoretical development includes the partitioning chemistry for the tracers we demonstrate (ammonia and carbon dioxide), as well as a review of the petrophysical relationship governing how these tracers influence bulk conductivity. We also investigate methodsmore » of utilizing secondary information provided by electrical conductivity breakthrough magnitudes induced by the tracers. We test the method on clean, well characterized, intermediate-scale sand columns under controlled conditions. Results demonstrate the capability to predict partitioning coefficients and accurately monitor gas breakthrough curves along the length of the column according to the corresponding electrical conductivity response, leading to accurate water saturation estimates. This work is motivated by the need to develop effective characterization and monitoring techniques for contaminated deep vadose zone environments, and provides a proof-of-concept toward uniquely characterizing and monitoring water saturation levels at the field scale and in three-dimensions using electrical resistivity tomography.« less

Time-lapse seismic waveform inversion for monitoring near-surface microbubble injection

NASA Astrophysics Data System (ADS)

Kamei, R.; Jang, U.; Lumley, D. E.; Mouri, T.; Nakatsukasa, M.; Takanashi, M.

2016-12-01

Seismic monitoring of the Earth provides valuable information regarding the time-varying changes in subsurface physical properties that are caused by natural or man-made processes. However, the resulting changes in subsurface properties are often small both in terms of magnitude and spatial extent, leading to seismic data differences that are difficult to detect at typical non-repeatable noise levels. In order to better extract information from the time-lapse data, exploiting the full seismic waveform information can be critical, since detected amplitude or traveltime changes may be minimal. We explore methods of waveform inversion that estimate an optimal model of time-varying elastic parameters at the wavelength scale to fit the observed time-lapse seismic data with modelled waveforms based on numerical solutions of the wave equation. We apply acoustic waveform inversion to time-lapse cross-well monitoring surveys of 64-m well intervals, and estimate the velocity changes that occur during the injection of microbubble water into shallow unconsolidated Quaternary sediments in the Kanto basin of Japan at a depth of 25 m below the surface. Microbubble water is comprised of water infused with air bubbles of a diameter less than 0.1mm, and may be useful to improve resistance to ground liquefaction during major earthquakes. Monitoring the space-time distribution and physical properties of microbubble injection is therefore important to understanding the full potential of the technique. Repeated monitoring surveys (>10) reveal transient behaviours in waveforms during microbubble injection. Time-lapse waveform inversion detects changes in P-wave velocity of less than 1 percent, initially as velocity increases and subsequently as velocity decreases. The velocity changes are mainly imaged within a thin (1 m) layer between the injection and the receiver well, inferring the fluid-flow influence of the fluvial sediment depositional environment. The resulting velocity models fit the observed waveforms very well, supporting the validity of the estimated velocity changes. In order to further improve the estimation of velocity changes, we investigate the limitations of acoustic waveform inversion, and apply elastic waveform inversion to the time-lapse data set.

Time-lapse electrical resistivity tomography: a powerful tool for landslide monitoring?

NASA Astrophysics Data System (ADS)

Perrone, A.

2011-12-01

The extreme rainfall events and the quick snowmelt occurrences play an important role in the triggering of the landslides. The occurrence of one of these factors can determine the variation of water content in the first layers of the subsoil and as a consequence a quick soil saturation inducing both an increase in pore-water pressures and the overloaded of the slopes progressively collapsing. The electrical resistivity, self-potential, electromagnetic induction and GPR methods can be considered as the most appropriate for assessing the presence of water in the underground. Such methods allow us to study the behavior of water content over much wider and deeper areas than those offered by traditional methods (thermo-gravimetric, tensiometric, TDR, etc) based on spot measures and concerning small volumes. In particular, the Electrical Resistivity Tomography (ERT), which has already proved to be a powerful tool both for the geometrical reconstruction of a landslide body (location of sliding surface, estimation of the thickness of the slide material) and the individuation of high water content areas, can be considered as an alternative tool to be employed for a qualitative and quantitative water content monitoring in the first layers of the subsoil. Indeed, time-lapse 2D ERT can be tested in order to gather information on the temporal and spatial patterns of water infiltration processes and water content variation. This work reports the preliminary results from a new prototype system planned to obtain time-lapse 2D ERTs, TDR and precipitation measurements in two landslide areas located in the Southern Apennine chain (Italy). The system was planned with the aim to estimate the variation of the resistivity parameter on a long period considering the water content variation, the rain water infiltration and the seasonal changes. The prototype system, linked to a pc used for storing data and managing the time interval acquisition, consists of: a resistivimeter connected to a multichannel cable, 48 steel electrodes buried in the soil at a depth of about 0.5 m at a distance of 1 or 5 m; a TDR system linked to 4 probes 20 cm length, buried at different depths along the same profile of the geoelectrical one; while a weather station consists of a rain gauge to quantify the amount of rain falling on that area, one sensor to measure the temperature and another to determine the speed and direction of the wind. At the beginning the time-lapse ERT were analysed to verify the functionality and stability of the system and to decide the measurement time intervals. After that, the statistical analysis of the results obtained was performed with the aim to define the water content variation in the first layers of the subsoil, in particular in the vadose zone. The results were compared with the TDR ones and the piezometric measurements were performed in the area thanks to the presence of equipped boreholes. The correlation between the variation of the parameters measured (electrical resistivity, water content and piezometric level) and the rain-gauge measurements was also considered. The preliminary results seem to be encouraged also if the analysis of the data acquired on a longer period could better highlight the capability of the system.

Time-lapse 3D electrical resistivity tomography to monitor soil-plant interactions

NASA Astrophysics Data System (ADS)

Boaga, Jacopo; Rossi, Matteo; Cassiani, Giorgio; Putti, Mario

2013-04-01

In this work we present the application of time-lapse non-invasive 3D micro- electrical tomography (ERT) to monitor soil-plant interactions in the root zone in the framework of the FP7 Project CLIMB (Climate Induced Changes on the Hydrology of Mediterranean Basins). The goal of the study is to gain a better understanding of the soil-vegetation interactions by the use of non-invasive techniques. We designed, built and installed a 3D electrical tomography apparatus for the monitoring of the root zone of a single apple tree in an orchard located in the Trentino region, Northern Italy. The micro-ERT apparatus consists of 48 buried electrodes on 4 instrumented micro boreholes plus 24 mini-electrodes on the surface spaced 0.1 m on a square grid. We collected repeated ERT and TDR soil moisture measurements for one year and performed two different controlled irrigation tests: one during a very dry Summer and one during a very wet and highly dynamic plant growing Spring period. We also ran laboratory analyses on soil specimens, in order to evaluate the electrical response at different saturation steps. The results demonstrate that 3D micro-ERT is capable of characterizing subsoil conditions and monitoring root zone activities, especially in terms of root zone suction regions. In particular, we note that in very dry conditions, 3D micro ERT can image water plumes in the shallow subsoil produced by a drip irrigation system. In the very dynamic growing season, under abundant irrigation, micro 3D ERT can detect the main suction zones caused by the tree root activity. Even though the quantitative use of this technique for moisture content balance suffers from well-known inversion difficulties, even the pure imaging of the active root zone is a valuable contribution. However the integration of the measurements in a fully coupled hydrogeophysical inversion is the way forward for a better understanding of subsoil interactions between biomass, hydrosphere and atmosphere.

3D time-lapse Electrical Resistivity Tomography (ERT) to monitor subsurface flow processes during a sprinkling and injection experiment on a mountain slope

NASA Astrophysics Data System (ADS)

Inauen, C.; Green, A.; Rabenstein, L.; Greenhalgh, S.; Kinzelbach, W.; Doetsch, J.; Hertrich, M.; Smoorenburg, M.; Volze, N.

2012-04-01

Understanding the relationships between precipitation volumes, surface runoff and subsurface storage, drainage and flow processes on mountain slopes is critical for flood management in alpine regions. In the Schächen catchment (central Switzerland) an unexpectedly delayed and heavy flood reaction to a long duration rainfall event was observed in 2005. It is believed that the steep creeping landmass slopes with thick soils were responsible for the delay. To better comprehend and visualise water infiltration and runoff formation we conducted a 3D time-lapse ERT experiment during a water sprinkling and injection experiment on the side of a hill in the Schächental region presumed representative of soil and other conditions associated with the delayed flood. Constant sprinkling at a rate of about 10mm/h was applied to a plot of area 30m x 5m. The electrical conductivity of the sprinkled water was approximately that of the pore water (25mS/m). A total of 33 consecutive ERT data sets, each comprising 3521 measured electrode configurations, were recorded with a 96-electrode array over an area of 27.5m x 14m, which included two thirds of the sprinkled area. Each electrode configuration was measured at a repeat interval of 2 to 2.8 hours. The entire 3D ERT monitoring experiment was divided into two separate time intervals: (1) the initial 25 hour period involving only freshwater sprinkling, until steady state was reached, (2) the following 35 hour period during which, in addition to the sprinkling, salt water was injected in two boreholes at a depth of 1m (unsaturated zone). The salt water injections were separated by 17 hours, and monitored until 14 hours after sprinkling stopped. During the first interval all changes in the subsurface resistivity are caused by changes in the water saturation and the temperature of the fluid, whereas in the second interval they are mainly due to changes in salt concentration of the pore fluid. Supplementary measurements of water table elevation and fluid electric conductivity were made in several boreholes. To image the subsurface resistivity changes, we inverted the ratios of time-lapse resistances to their background (pre-sprinkling) values. The sprinkling during time interval 1 allowed us to examine near-surface infiltration. Even from the first time window, the emergence of a shallow wetting front could be observed in the inverted depth sections as a decrease in bulk resistivity. Both salt water plumes during interval 2 were found to move laterally as well as vertically through the soil into a zone of fissured Flysch. Below the water table, the plume could be tracked further as a weaker ERT signal, which shows a flow component parallel to the water table in the downslope direction where it eventually breaks the surface. 3D ERT monitoring has proven to be a powerful tool to monitor water sprinkling and injection experiments. Due to its advantageous ability to resolve changes, both in time and in space, it captured most of the soil moisture and flow dynamics. Processes, such as infiltration and drainage, which are important for the understanding of runoff formation, could be readily visualized.

Real-time 4D ERT monitoring of river water intrusion into a former nuclear disposal site using a transient warping-mesh water table boundary (Invited)

NASA Astrophysics Data System (ADS)

Johnson, T.; Hammond, G. E.; Versteeg, R. J.; Zachara, J. M.

2013-12-01

The Hanford 300 Area, located adjacent to the Columbia River in south-central Washington, USA, is the site of former research and uranium fuel rod fabrication facilities. Waste disposal practices at site included discharging between 33 and 59 metric tons of uranium over a 40 year period into shallow infiltration galleries, resulting in persistent uranium contamination within the vadose and saturated zones. Uranium transport from the vadose zone to the saturated zone is intimately linked with water table fluctuations and river water intrusion driven by upstream dam operations. As river stage increases, the water table rises into the vadose zone and mobilizes contaminated pore water. At the same time, river water moves inland into the aquifer, and river water chemistry facilitates further mobilization by enabling uranium desorption from contaminated sediments. As river stage decreases, flow moves toward the river, ultimately discharging contaminated water at the river bed. River water specific conductance at the 300 Area varies around 0.018 S/m whereas groundwater specific conductance varies around 0.043 S/m. This contrast provides the opportunity to monitor groundwater/river water interaction by imaging changes in bulk conductivity within the saturated zone using time-lapse electrical resistivity tomography. Previous efforts have demonstrated this capability, but have also shown that disconnecting regularization constraints at the water table is critical for obtaining meaningful time-lapse images. Because the water table moves with time, the regularization constraints must also be transient to accommodate the water table boundary. This was previously accomplished with 2D time-lapse ERT imaging by using a finely discretized computational mesh within the water table interval, enabling a relatively smooth water table to be defined without modifying the mesh. However, in 3D this approach requires a computational mesh with an untenable number of elements. In order to accommodate the water table boundary in 3D, we propose a time-lapse warping mesh inversion, whereby mesh elements that traverse the water table are modified to generate a smooth boundary at the known water table position, enabling regularization constraints to be accurately disconnected across the water table boundary at a given time. We demonstrate the approach using a surface ERT array installed adjacent to the Columbia River at the 300 Area, consisting of 352 electrodes and covering an area of approximately 350 m x 350 m. Using autonomous data collection, transmission, and filtering tools coupled with high performance computing resources, the 4D imaging process is automated and executed in real time. Each time lapse survey consists of approximately 40,000 measurements and 4 surveys are collected and processed per day from April 1st , 2013 to September 30th, 2013. The data are inverted on an unstructured tetrahedral mesh that honors LiDAR-based surface topography and is comprised of approximately 905,000 elements. Imaging results show the dynamic 4D extent of river water intrusion, and are validated with well-based fluid conductivity measurements at each monitoring well within the imaging domain.

Assessment of local hydraulic properties from electrical resistivity tomography monitoring of a three-dimensional synthetic tracer test experiment

NASA Astrophysics Data System (ADS)

Camporese, M.; Cassiani, G.; Deiana, R.; Salandin, P.

2011-12-01

In recent years geophysical methods have become increasingly popular for hydrological applications. Time-lapse electrical resistivity tomography (ERT) represents a potentially powerful tool for subsurface solute transport characterization since a full picture of the spatiotemporal evolution of the process can be obtained. However, the quantitative interpretation of tracer tests is difficult because of the uncertainty related to the geoelectrical inversion, the constitutive models linking geophysical and hydrological quantities, and the a priori unknown heterogeneous properties of natural formations. Here an approach based on the Lagrangian formulation of transport and the ensemble Kalman filter (EnKF) data assimilation technique is applied to assess the spatial distribution of hydraulic conductivity K by incorporating time-lapse cross-hole ERT data. Electrical data consist of three-dimensional cross-hole ERT images generated for a synthetic tracer test in a heterogeneous aquifer. Under the assumption that the solute spreads as a passive tracer, for high Peclet numbers the spatial moments of the evolving plume are dominated by the spatial distribution of the hydraulic conductivity. The assimilation of the electrical conductivity 4D images allows updating of the hydrological state as well as the spatial distribution of K. Thus, delineation of the tracer plume and estimation of the local aquifer heterogeneity can be achieved at the same time by means of this interpretation of time-lapse electrical images from tracer tests. We assess the impact on the performance of the hydrological inversion of (i) the uncertainty inherently affecting ERT inversions in terms of tracer concentration and (ii) the choice of the prior statistics of K. Our findings show that realistic ERT images can be integrated into a hydrological model even within an uncoupled inverse modeling framework. The reconstruction of the hydraulic conductivity spatial distribution is satisfactory in the portion of the domain directly covered by the passage of the tracer. Aside from the issues commonly affecting inverse models, the proposed approach is subject to the problem of the filter inbreeding and the retrieval performance is sensitive to the choice of K prior geostatistical parameters.

The Effect of Elevation Bias in Interpolated Air Temperature Data Sets on Surface Warming in China During 1951-2015

NASA Astrophysics Data System (ADS)

Wang, Tingting; Sun, Fubao; Ge, Quansheng; Kleidon, Axel; Liu, Wenbin

2018-02-01

Although gridded air temperature data sets share much of the same observations, different rates of warming can be detected due to different approaches employed for considering elevation signatures in the interpolation processes. Here we examine the influence of varying spatiotemporal distribution of sites on surface warming in the long-term trend and over the recent warming hiatus period in China during 1951-2015. A suspicious cooling trend in raw interpolated air temperature time series is found in the 1950s, and 91% of which can be explained by the artificial elevation changes introduced by the interpolation process. We define the regression slope relating temperature difference and elevation difference as the bulk lapse rate of -5.6°C/km, which tends to be higher (-8.7°C/km) in dry regions but lower (-2.4°C/km) in wet regions. Compared to independent experimental observations, we find that the estimated monthly bulk lapse rates work well to capture the elevation bias. Significant improvement can be achieved in adjusting the interpolated original temperature time series using the bulk lapse rate. The results highlight that the developed bulk lapse rate is useful to account for the elevation signature in the interpolation of site-based surface air temperature to gridded data sets and is necessary for avoiding elevation bias in climate change studies.

Monitoring electrical properties for improving the lithological and hydrological characterization of landslides

NASA Astrophysics Data System (ADS)

Malet, J. P.; Gance, J.; Lajaunie, M.; Gallistl, J.; Denchik, N.; Flores Orozco, A.; Ottowitz, D.; Supper, R.; Sailhac, P.; Gautier, S.; Schmutz, M.

2017-12-01

Imaging water flows in landslides is of critical importance as the distribution of pore-fluid pressures controls the dynamics (acceleration, deceleration) of the material. Detecting and imaging water is a difficult task, not only because of the complex topography and the small dimensions of the geological structures, but also because the landslide material consists of unsaturated porous and heterogeneous fractured media, leading to multi-scale water-flow properties. Further, these properties can change in time, in relation to temperature, rainfall and biological forcings. Electrical properties are relevant proxies of the sub-surface hydrological properties. In order to image water in landslide bodies, we propose to combine multi-frequency electrical and electromagnetic measurements using campaigns or permanent instruments, and surface/boreole investigations, installed on several unstable slopes in France. To evaluate the information gained from electrical properties for different geological conditions, we discuss electrical and electro-magnetic imaging results for data collected at four different landslides located in France (Super-Sauze and La Valette in the South East Alps, Lodève lin the southern border of the Massif Central Massif, and Séchilienne in the North French Alps). Time-lapse electrical DC resistivity observations, complex electrical conductivity (conduction and polarization/chargeability) measured by IP imaging methods, and controlled-source electromagnetic (CS-AMT) methods are discussed. Imaging results demonstrate an improved lithological characterization of the landslide structures (delineation of the sliding planes, identification of the fractures, discrimination of clay lenses with enhanced resolution); further, water infiltration within the soil matrix and/or the fractures is discriminated allowing better modelling of the hydrological regime of the landslides at the slope scale. This research is conducted in the frame of the project HYDROSLIDE - Hydrogeophysical Monitoring of Clay-Rich Landslides funded by the Austrian Science Fund (FWF) and the French Research Agency (ANR).

Evaluating time-lapse ERT for monitoring DNAPL remediation via numerical simulation

NASA Astrophysics Data System (ADS)

Power, C.; Karaoulis, M.; Gerhard, J.; Tsourlos, P.; Giannopoulos, A.

2012-12-01

Dense non-aqueous phase liquids (DNAPLs) remain a challenging geoenvironmental problem in the near subsurface. Numerous thermal, chemical, and biological treatment methods are being applied at sites but without a non-destructive, rapid technique to map the evolution of DNAPL mass in space and time, the degree of remedial success is difficult to quantify. Electrical resistivity tomography (ERT) has long been presented as highly promising in this context but has not yet become a practitioner's tool due to challenges in interpreting the survey results at real sites where the initial condition (DNAPL mass, DNAPL distribution, subsurface heterogeneity) is typically unknown. Recently, a new numerical model was presented that couples DNAPL and ERT simulation at the field scale, providing a tool for optimizing ERT application and interpretation at DNAPL sites (Power et al., 2011, Fall AGU, H31D-1191). The objective of this study is to employ this tool to evaluate the effectiveness of time-lapse ERT to monitor DNAPL source zone remediation, taking advantage of new inversion methodologies that exploit the differences in the target over time. Several three-dimensional releases of chlorinated solvent DNAPLs into heterogeneous clayey sand at the field scale were generated, varying in the depth and complexity of the source zone (target). Over time, dissolution of the DNAPL in groundwater was simulated with simultaneous mapping via periodic ERT surveys. Both surface and borehole ERT surveys were conducted for comparison purposes. The latest four-dimensional ERT inversion algorithms were employed to generate time-lapse isosurfaces of the DNAPL source zone for all cases. This methodology provided a qualitative assessment of the ability of ERT to track DNAPL mass removal for complex source zones in realistically heterogeneous environments. In addition, it provided a quantitative comparison between the actual DNAPL mass removed and that interpreted by ERT as a function of depth below the water table, as well as an estimate of the minimum DNAPL saturation changes necessary for an observable response from ERT.

Time-Lapse Measurement of Wellbore Integrity

NASA Astrophysics Data System (ADS)

Duguid, A.

2017-12-01

Well integrity is becoming more important as wells are used longer or repurposed. For CO2, shale gas, and other projects it has become apparent that wells represent the most likely unintended migration pathway for fluids out of the reservoir. Comprehensive logging programs have been employed to determine the condition of legacy wells in North America. These studies provide examples of assessment technologies. Logging programs have included pulsed neutron logging, ultrasonic well mapping, and cement bond logging. While these studies provide examples of what can be measured, they have only conducted a single round of logging and cannot show if the well has changed over time. Recent experience with time-lapse logging of three monitoring wells at a US Department of Energy sponsored CO2 project has shown the full value of similar tools. Time-lapse logging has shown that well integrity changes over time can be identified. It has also shown that the inclusion of and location of monitoring technologies in the well and the choice of construction materials must be carefully considered. Two of the wells were approximately eight years old at the time of study; they were constructed with steel and fiberglass casing sections and had lines on the outside of the casing running to the surface. The third well was 68 years old when it was studied and was originally constructed as a production well. Repeat logs were collected six or eight years after initial logging. Time-lapse logging showed the evolution of the wells. The results identified locations where cement degraded over time and locations that showed little change. The ultrasonic well maps show clearly that the lines used to connect the monitoring technology to the surface are visible and have a local effect on cement isolation. Testing and sampling was conducted along with logging. It provided insight into changes identified in the time-lapse log results. Point permeability testing was used to provide an in-situ point estimate of the cement isolating capacity. Cased-hole sidewall cores in the steel and fiberglass casing sections allowed analysis of bulk cement and the cement at the casing- and formation-interface. This presentation will cover how time-lapse logging was conducted, how the results may be applicable to other wells, and how monitoring well design may affect wellbore integrity.

Time-lapse changes of P- and S-wave velocities and shear wave splitting in the first year after the 2011 Tohoku earthquake, Japan: shallow subsurface

NASA Astrophysics Data System (ADS)

Sawazaki, Kaoru; Snieder, Roel

2013-04-01

We detect time-lapse changes in P- and S-wave velocities (hereafter, VP and VS, respectively) and shear wave splitting parameters associated with the 2011 Tohoku earthquake, Japan, at depths between 0 and 504 m. We estimate not only medium parameters but also the 95 per cent confidence interval of the estimated velocity change by applying a new least squares inversion scheme to the deconvolution analysis of KiK-net vertical array records. Up to 6 per cent VS reduction is observed at more than half of the analysed KiK-net stations in northeastern Japan with over 95 per cent confidence in the first month after the main shock. There is a considerable correlation between the S-wave traveltime delay and the maximum horizontal dynamic strain (MDS) by the main shock motion when the strain exceeds 5 × 10- 4 on the ground surface. This correlation is not clearly observed for MDS at the borehole bottom. On the contrary, VP and shear wave splitting parameters do not show systematic changes after the Tohoku earthquake. These results indicate that the time-lapse change is concentrated near the ground surface, especially in loosely packed soil layers. We conclude that the behaviour of VP, VS and shear wave splitting parameters are explained by the generation of omnidirectional cracks near the ground surface and by the diffusion of water in the porous subsurface. Recovery of VS should be related to healing of the crack which is proportional to the logarithm of the lapse time after the main shock and/or to decompaction after shaking.

Monitoring of In-Situ Remediation By Time Lapse 3D Geo-Electric Measurements

NASA Astrophysics Data System (ADS)

Kanli, A. I.; Tildy, P.; Neducza, B.; Nagy, P.; Hegymegi, C.

2017-12-01

Injection of chemical oxidant solution to degrade the subsurface contaminants can be used for hydrocarbon contamination remediation. In this study, we developed a non-destructive measurement strategy to monitor oxidative in-situ remediation processes. The difficulties of the presented study originate from the small volume of conductive solution that can be used due to environmental considerations. Due to the effect of conductive groundwater and the high clay content of the targeted layer and the small volume of conductive solution that can be used due to environmental considerations, a site specific synthetic modelling is necessary for measurement design involving the results of preliminary 2D ERT measurements, electrical conductivity measurements of different active agents and expected resistivity changes calculated by soil resistivity modelling. Because of chemical biodegradation, the results of soil resistivity modelling have suggested that the reagent have complex effects on contaminated soils. As a result the plume of resistivity changes caused by the injected agent was determined showing strong fracturing effect because of the high pressure of injection. 3D time-lapse geo-electric measurements were proven to provide a usable monitoring tool for in-situ remediation as a result of our sophisticated tests and synthetic modelling.

4D inversion of time-lapse magnetotelluric data sets for monitoring geothermal reservoir

NASA Astrophysics Data System (ADS)

Nam, Myung Jin; Song, Yoonho; Jang, Hannuree; Kim, Bitnarae

2017-06-01

The productivity of a geothermal reservoir, which is a function of the pore-space and fluid-flow path of the reservoir, varies since the properties of the reservoir changes with geothermal reservoir production. Because the variation in the reservoir properties causes changes in electrical resistivity, time-lapse (TL) three-dimensional (3D) magnetotelluric (MT) methods can be applied to monitor the productivity variation of a geothermal reservoir thanks to not only its sensitivity to the electrical resistivity but also its deep depth of survey penetration. For an accurate interpretation of TL MT-data sets, a four-dimensional (4D) MT inversion algorithm has been developed to simultaneously invert all vintage data considering time-coupling between vintages. However, the changes in electrical resistivity of deep geothermal reservoirs are usually small generating minimum variation in TL MT responses. Maximizing the sensitivity of inversion to the changes in resistivity is critical in the success of 4D MT inversion. Thus, we further developed a focused 4D MT inversion method by considering not only the location of a reservoir but also the distribution of newly-generated fractures during the production. For the evaluation of the 4D MT algorithm, we tested our 4D inversion algorithms using synthetic TL MT-data sets.

Surface-downhole and crosshole geoelectrics for monitoring of brine injection at the Ketzin CO2 storage site

NASA Astrophysics Data System (ADS)

Rippe, Dennis; Bergmann, Peter; Labitzke, Tim; Wagner, Florian; Schmidt-Hattenberger, Cornelia

2016-04-01

The Ketzin pilot site in Germany is the longest operating on-shore CO2 storage site in Europe. From June 2008 till August 2013, a total of ˜67,000 tonnes of CO2 were safely stored in a saline aquifer at depths of 630 m to 650 m. The storage site has now entered the abandonment phase, and continuation of the multi-disciplinary monitoring as part of the national project "CO2 post-injection monitoring and post-closure phase at the Ketzin pilot site" (COMPLETE) provides the unique chance to participate in the conclusion of the complete life cycle of a CO2 storage site. As part of the continuous evaluation of the functionality and integrity of the CO2 storage in Ketzin, from October 12, 2015 till January 6, 2015 a total of ˜2,900 tonnes of brine were successfully injected into the CO2 reservoir, hereby simulating in time-lapse the natural backflow of brine and the associated displacement of CO2. The main objectives of this brine injection experiment include investigation of how much of the CO2 in the pore space can be displaced by brine and if this displacement of CO2 during the brine injection differs from the displacement of formation fluid during the initial CO2 injection. Geophysical monitoring of the brine injection included continuous geoelectric measurements accompanied by monitoring of pressure and temperature conditions in the injection well and two adjacent observation wells. During the previous CO2 injection, the geoelectrical monitoring concept at the Ketzin pilot site consisted of permanent crosshole measurements and non-permanent large-scale surveys (Kiessling et al., 2010). Time-lapse geoelectrical tomographies derived from the weekly crosshole data at near-wellbore scale complemented by six surface-downhole surveys at a scale of 1.5 km showed a noticeable resistivity signature within the target storage zone, which was attributed to the CO2 plume (Schmidt-Hattenberger et al., 2011) and interpreted in terms of relative CO2 and brine saturations (Bergmann et al., 2012). During the brine injection, usage of a new data acquisition unit allowed the daily collection of an extended crosshole data set. This data set was complemented by an alternative surface-downhole acquisition geometry, which for the first time allowed for regular current injections from three permanent surface electrodes into the existing electrical resistivity downhole array without the demand of an extensive field survey. This alternative surface-downhole acquisition geometry is expected to be characterized by good data quality and well confined sensitivity to the target storage zone. Time-lapse geoelectrical tomographies have been derived from both surface-downhole and crosshole data and show a conductive signature around the injection well associated with the displacement of CO2 by the injected brine. In addition to the above mentioned objectives of this brine injection experiment, comparative analysis of the surface-downhole and crosshole data provides the opportunity to evaluate the alternative surface-downhole acquisition geometry with respect to its resolution within the target storage zone and its ability to quantitatively constrain the displacement of CO2 during the brine injection. These results will allow for further improvement of the deployed alternative surface-downhole acquisition geometries. References Bergmann, P., Schmidt-Hattenberger, C., Kiessling, D., Rücker, C., Labitzke, T., Henninges, J., Baumann, G., Schütt, H. (2012). Surface-Downhole Electrical Resistivity Tomography applied to Monitoring of the CO2 Storage Ketzin (Germany). Geophysics, 77, B253-B267. Kiessling, D., Schmidt-Hattenberger, C., Schuett, H., Schilling, F., Krueger, K., Schoebel, B., Danckwardt, E., Kummerow, J., CO2SINK Group (2010). Geoelectrical methods for monitoring geological CO2 storage: First results from cross-hole and surface-downhole measurements from the CO2SINK test site at Ketzin (Germany). International Journal of Greenhouse Gas Control, 4(5), 816-826. Schmidt-Hattenberger, C., Bergmann, P., Kießling, D., Krüger, K., Rücker, C., Schütt, H., Ketzin Group (2011). Application of a Vertical Electrical Resistivity Array (VERA) for monitoring CO2 migration at the Ketzin site: First performance evaluation. Energy Procedia, 4, 3363-3370.

Time-lapse Inversion of Electrical Resistivity Data

NASA Astrophysics Data System (ADS)

Nguyen, F.; Kemna, A.

2005-12-01

Time-lapse geophysical measurements (also known as monitoring, repeat or multi-frame survey) now play a critical role for monitoring -non-destructively- changes induced by human, as reservoir compaction, or to study natural processes, as flow and transport in porous media. To invert such data sets into time-varying subsurface properties, several strategies are found in different engineering or scientific fields (e.g., in biomedical, process tomography, or geophysical applications). Indeed, for time-lapse surveys, the data sets and the models at each time frame have the particularity to be closely related to their "neighbors", if the process does not induce chaotic or very high variations. Therefore, the information contained in the different frames can be used for constraining the inversion in the others. A first strategy consists in imposing constraints to the model based on prior estimation, a priori spatiotemporal or temporal behavior (arbitrary or based on a law describing the monitored process), restriction of changes in certain areas, or data changes reproducibility. A second strategy aims to invert directly the model changes, where the objective function penalizes those models whose spatial, temporal, or spatiotemporal behavior differs from a prior assumption or from a computed a priori. Clearly, the incorporation of time-lapse a priori information, determined from data sets or assumed, in the inversion process has been proven to improve significantly the resolving capability, mainly by removing artifacts. However, there is a lack of comparison of these methods. In this paper, we focus on Tikhonov-like inversion approaches for electrical tomography imaging to evaluate the capability of the different existing strategies, and to propose new ones. To evaluate the bias inevitably introduced by time-lapse regularization, we quantified the relative contribution of the different approaches to the resolving power of the method. Furthermore, we incorporated different noise levels and types (random and/or systematic) to determine the strategies' ability to cope with real data. Introducing additional regularization terms yields also more regularization parameters to compute. Since this is a difficult and computationally costly task, we propose that it should be proportional to the velocity of the process. To achieve these objectives, we tested the different methods using synthetic models, and experimental data, taking noise and error propagation into account. Our study shows that the choice of the inversion strategy highly depends on the nature and magnitude of noise, whereas the choice of the regularization term strongly influences the resulting image according to the a priori assumption. This study was developed under the scope of the European project ALERT (GOCE-CT-2004-505329).

Evolution of the electrical resistivity anisotropy during saline tracer tests: insights from geoelectrical milli-fluidic experiments

NASA Astrophysics Data System (ADS)

Jougnot, D.; Jimenez-Martinez, J.; Legendre, R.; Le Borgne, T.; Meheust, Y.; Linde, N.

2017-12-01

The use of time-lapse electrical resistivity tomography has been largely developed in environmental studies to remotely monitor water saturation and contaminant plumes migration. However, subsurface heterogeneities, and corresponding preferential transport paths, yield a potentially large anisotropy in the electrical properties of the subsurface. In order to study this effect, we have used a newly developed geoelectrical milli-fluidic experimental set-up with a flow cell that contains a 2D porous medium consisting of a single layer of cylindrical solid grains. We performed saline tracer tests under full and partial water saturations in that cell by jointly injecting air and aqueous solutions with different salinities. The flow cell is equipped with four electrodes to measure the bulk electrical resistivity at the cell's scale. The spatial distribution of the water/air phases and the saline solute concentration field in the water phase are captured simultaneously with a high-resolution camera by combining a fluorescent tracer with the saline solute. These data are used to compute the longitudinal and transverse effective electrical resistivity numerically from the measured spatial distributions of the fluid phases and the salinity field. This approach is validated as the computed longitudinal effective resistivities are in good agreement with the laboratory measurements. The anisotropy in electrical resistivity is then inferred from the computed longitudinal and transverse effective resistivities. We find that the spatial distribution of saline tracer, and potentially air phase, drive temporal changes in the effective resistivity through preferential paths or barriers for electrical current at the pore scale. The resulting heterogeneities in the solute concentrations lead to strong anisotropy of the effective bulk electrical resistivity, especially for partially saturated conditions. Therefore, considering the electrical resistivity as a tensor could improve our understanding of transport properties from field-scale time-lapse ERT.

In situ monitoring of corrosion mechanisms and phosphate inhibitor surface deposition during corrosion of zinc-magnesium-aluminium (ZMA) alloys using novel time-lapse microscopy.

PubMed

Sullivan, James; Cooze, Nathan; Gallagher, Callum; Lewis, Tom; Prosek, Tomas; Thierry, Dominique

2015-01-01

In situ time-lapse optical microscopy was used to examine the microstructural corrosion mechanisms in three zinc-magnesium-aluminium (ZMA) alloy coated steels immersed in 1% NaCl pH 7. Preferential corrosion of MgZn(2) lamellae within the eutectic phases was observed in all the ZMA alloys followed by subsequent dissolution of Zn rich phases. The total extent and rate of corrosion, measured using time-lapse image analysis and scanning vibrating electrode technique (SVET) estimated mass loss, decreased as Mg and Al alloying additions were increased up to a level of 3 wt% Mg and 3.7 wt% Al. This was probably due to the increased presence of MgO and Al(2)O(3) at the alloy surface retarding the kinetics of cathodic oxygen reduction. The addition of 1 × 10(-2) mol dm(-3) Na(3)PO(4) to 1% NaCl pH 7 had a dramatic influence on the corrosion mechanism for a ZMA with passivation of anodic sites through phosphate precipitation observed using time-lapse image analysis. Intriguing rapid precipitation of filamentous phosphate was also observed and it is postulated that these filaments nucleate and grow due to super saturation effects. Polarisation experiments showed that the addition of 1 × 10(-2) mol dm(-3) Na(3)PO(4) to the 1% NaCl electrolyte promoted an anodic shift of 50 mV in open circuit potential for the ZMA alloy with a reduction in anodic current of 2.5 orders of magnitude suggesting that it was acting primarily as an anodic inhibitor supporting the inferences from the time-lapse investigations. These phosphate additions resulted in a 98% reduction in estimated mass loss as measured by SVET demonstrating the effectiveness of phosphate inhibitors for this alloy system.

High-frequency HYDRO-geophysical observations for an advanced understanding of clayey landSLIDES: the HYDROSLIDE research project

NASA Astrophysics Data System (ADS)

Malet, Jean-Philippe; Supper, Robert; Flores-Orozco, Adrian; Gautier, Stéphanie; Bogaard, Thom

2017-04-01

As a consequence of change in hydrological cycles and the increase of exposed goods, the risk of landslides is globally growing all over the world. As a consequence, short-time landslide prediction is a fundamental tool for risk mitigation. To this aim, real-time monitoring and interpretation methods aiming at a full exploitation of the available landslide information are needed, including further development of sensor technology and use of advanced numerical modeling. The most commonly used warning parameters are direct measurements of slope displacement and pore-water pressures. However, recent research on landslide controlled by slope hydrology has shown that other parameters (e.g. soil moisture) can be used and other methods (e.g. electrical resistivity tomography, electrical spontaneous potential) are available, which might give indications on triggering even before an actual displacement is measureable and thus could possibly be used as physical precursors for short-term warning. The CNRS - Ecole et Observatoire des Sciences de la Terre (EOST) and the Geological Survey of Austria - Geophysical Division (GBA) started successfully to evaluate time-lapse resistivity measurements for monitoring changes in water content/flows in landslides at different monitoring sites. At the same period, CNRS also started to establish the French Observatory on Landslides (OMIV: omiv.unistra.fr), which task is the long term monitoring and data sharing of landslide parameters (geodesy, hydrology, seismic). Results from these projects proved that electrical resistivity monitoring can be successfully applied to detect changes in water storage and to understand water circulation in complex landslide bodies. However, especially for clayey landslides, this method is only applicable with limitation, since the resistivity of clays shows almost the same values as the resistivity of the saturated soil (15-20 O.m). Consequently, the change in water content expressed in the electrical resistivity is difficult to identify. Therefore the extension of the concept of resistivity to Induced Polarization (IP) (both in the time and spectral domains) is proposed in order to better understand the relationships between physical and hydro(geo)logical properties of the slope material. To understand the landslide triggering mechanisms, surface and in-depth deformation have to be monitored. Up to now, most of the landslides monitoring sites are equipped with GNSS receivers and total station benchmarks at the surface or inclinometers at depths, which provide only point (1D) information and/or have limitations at high displacement rates. To solve interpretation ambiguities and to account for spatial changes, not only point information, but also horizontally and vertically (borehole) distributed displacement/strain observations are necessary. New approaches are suggested in the project, namely temperature and strain monitoring at high frequency with Fiber-Optic (FO) cables both at the surface and in boreholes, sensing of surface deformation with Ultra-High Resolution (UHR, 20 cm) optical images (time-lapse ground based cameras). The combined application of these methods for landslide monitoring is very rare and has not been tested rigorously. Further, the joint interpretation of electrical resistivity, soil temperature, hydrological and strain data need to be supported by coupled multi-physical modelling in order to quantitatively establish petrophysical relationships for several slope configurations, material properties and groundwater conditions. The applicability of the approach is discussed for landslide sites representative of different hydrological forcings: La Valette (South French Alps; Alpes-de-Haute-Provence) and Lodève (South Central Massif, Hérault).

Pinpoint Delivery of Molecules by Using Electron Beam Addressing Virtual Cathode Display.

PubMed

Hoshino, Takayuki; Yoshioka, Moto; Wagatsuma, Akira; Miyazako, Hiroki; Mabuchi, Kunihiko

2018-03-01

Electroporation, a physical transfection method to introduce genomic molecules in selective living cells, could be implemented by microelectrode devices. A local electric field generated by a finer electrode can induces cytomembrane poration in the electrode vicinity. To employ fine, high-speed scanning electrodes, we developed a fine virtual cathode pattern, which was generated on a cell adhesive surface of 100-nm-thick SiN membrane by inverted-electron beam lithography. The SiN membrane works as both a vacuum barrier and the display screen of the virtual cathode. The kinetic energy of the incident primary electrons to the SiN membrane was completely blocked, whereas negative charges and leaking electric current appeared on the surface of the dielectric SiN membrane within a region of 100 nm. Locally controlled transmembrane molecular delivery was demonstrated on adhered C2C12 myoblast cells in a culturing medium with fluorescent dye propidium iodide (PI). Increasing fluorescence of pre-diluted PI indicated local poration and transmembrane inflow at the virtual cathode position, as well as intracellular diffusion. The transmembrane inflows depended on beam duration time and acceleration voltage. At the post-molecular delivery, a slight decrease in intracellular PI fluorescence intensity indicates membrane recovery from the poration. Cell viability was confirmed by time-lapse cell imaging of post-exposure cell migration.

Time-lapse electrical resistivity imaging of the thermally affected zone of a Borehole Thermal Energy Storage system near Torino (Northern Italy)

NASA Astrophysics Data System (ADS)

Giordano, N.; Arato, A.; Comina, C.; Mandrone, G.

2017-05-01

A Borehole Thermal Energy Storage living lab was built up nearby Torino (Northern Italy). This living lab aims at testing the ability of the alluvial deposits of the north-western Po Plain to store the thermal energy collected by solar thermal panels and the efficiency of energy storage systems in this climatic context. Different monitoring approaches have been tested and analyzed since the start of the thermal injection in April 2014. Underground temperature monitoring is constantly undertaken by means of several temperature sensors located along the borehole heat exchangers and within the hydraulic circuit. Nevertheless, this can provide only pointwise information about underground temperature distribution. For this reason, a geophysical approach is proposed in order to image the thermally affected zone (TAZ) caused by the heat injection: surface electrical resistivity measurements were carried out with this purpose. In the present paper, results of time-lapse acquisitions during a heating day are reported with the aim of imaging the thermal plume evolution within the subsoil. Resistivity data, calibrated on local temperature measurements, have shown their potentiality in imaging the heated plume of the system and depicting its evolution throughout the day. Different types of data processing were adopted in order to face issues mainly related to a highly urbanized environment. The use of apparent resistivity proved to be in valid agreement with the results of different inversion approaches. The inversion processes did not significantly improve the qualitative and quantitative TAZ imaging in comparison to the pseudo-sections. This suggested the usefulness of apparent resistivity data alone for a rough monitoring of TAZ in this kind of applications.

MONITORING EROSION OF STONE SURFACES USING TIME-LAPSE AND PTM PHOTOGRAPHY: FIELD STUDY OF A 14TH CENTURY MONASTERY IN YORKSHIRE

NASA Astrophysics Data System (ADS)

Doehne, E.; Pinchin, S.

2009-12-01

Evaluating stone weathering rates and their relationship to environmental fluctuations is an important challenge in understanding the critical zone and also in efforts to prevent the loss of important cultural heritage in stone, such as monuments, sculpture and archaeological sites. Repeat photography has been widely used to evaluate geological processes such as the retreat of glaciers and the weathering of stone surfaces. However, a fundamental difficulty is that the images are often shot under differing lighting conditions, making the interpretation of stone surface loss particularly challenging. Two developments in photographic documentation show promise for improving the situation. One is the use of digital time-lapse methods to provide more frequent images to correlate stone surface loss with ongoing environmental changes. The other is a relatively new method known as polynomial transform mapping (PTM), which integrates multiple photographs taken at different angles to document more comprehensively the texture of stone surfaces. Using Java-based software, the viewer can control the precise angle of the light source in an interpolated, high-quality image. PTM can produce raking light images from any angle, as well as images with ‘normal’ illumination. We present here results based on several years of macro-photography, time-lapse imaging, and PTM imaging of rapidly eroding stone surfaces at the site of Howden Minster in Yorkshire, UK, which suffers from salt weathering. The images show that surface loss is episodic rather than continuous and in some cases is related to unusual environmental conditions, such as high winds and condensation events. Damage was also found to be synchronous, with surface change (flaking, granular disintegration, and loss of flakes) occurring at the same time in different stone blocks. Crystallization pressure from phase transitions in magnesium sulfate salts appears to be the main cause of the loss of stone surfaces.

Real-time 4D electrical resistivity imaging of tracer transport within an energically stimulated fracture zone

NASA Astrophysics Data System (ADS)

Johnson, T. C.

2016-12-01

Hydraulic fracture stimulation is used extensively in the subsurface energy sector to improve access between energy bearing formations and production boreholes. However, large uncertainties exist concerning the location and extent of stimulated fractures, and concerning the behavior of flow within those fractures. This uncertainty often results in significant risks, including induced seismicity and contamination of potable groundwater aquifers. Time-lapse electrical resistivity tomography (ERT) is a proven method of imaging fluid flow within fracture networks, by imaging the change in bulk conductivity induced by the presence of an electrically anomalous tracer within the fracture. In this work we demonstrate characterization and flow monitoring of a stimulated fracture using real-time four-dimensional ERT imaging within an unsaturated rhyolite formation. After stimulation, a conductive tracer was injected into the fracture zone. ERT survey data were continuously and autonomously collected, pre-processed on site, submitted to an off-site high performance computing system for inversion, and returned to the field for inspection. Surveys were collected at approximately 12 minute intervals. Data transmission and inversion required approximately 2 minutes per survey. The time-lapse imaging results show the dominant flow-paths within the stimulated fracture zone, thereby revealing the location and extent of the fracture, and the behavior of tracer flow within the fracture. Ultimately real-time imaging will enable site operators to better understand stimulation operations, and control post-stimulation reservoir operations for optimal performance and environmental protection.

A study of possible ``reef effects'' caused by a long-term time-lapse camera in the deep North Pacific

NASA Astrophysics Data System (ADS)

Vardaro, M. F.; Parmley, D.; Smith, K. L.

2007-08-01

The aggregation response of fish populations following the addition of artificial structures to seafloor habitats has been well documented in shallow-water reefs and at deeper structures such as oil extraction platforms. A long-term time-lapse camera was deployed for 27 four-month deployment periods at 4100 m in the eastern North Pacific to study abyssal megafauna activity and surface-benthos connections. The unique time-series data set provided by this research presented an opportunity to examine how deep-sea benthopelagic fish and epibenthic megafauna populations were affected by an isolated artificial structure and whether animal surveys at this site were biased by aggregation behavior. Counts were taken of benthopelagic grenadiers, Coryphaenoides spp., observed per week as well as numbers of the epibenthic echinoid Echinocrepis rostrata. No significant correlation ( rs=-0.39; p=0.11) was found between the duration of deployment (in weeks) and the average number of Coryphaenoides observed at the site. There was also no evidence of associative behavior around the time-lapse camera by E. rostrata ( rs=-0.32; p=0.19). The results of our study suggest that abyssal fish and epibenthic megafauna do not aggregate around artificial structures and that long-term time-lapse camera studies should not be impacted by aggregation response behaviors.

Rock Slope Monitoring from 4D Time-Lapse Structure from Motion Analysis

NASA Astrophysics Data System (ADS)

Kromer, Ryan; Abellan, Antonio; Chyz, Alex; Hutchinson, Jean

2017-04-01

Structure from Motion (SfM) photogrammetry has become an important tool for studying earth surface processes because of its flexibility, ease of use, low cost and its capability of producing high quality 3-D surface models. A major benefit of SfM is that model accuracy is fit for purpose and surveys can be designed to meet a large range of spatial and temporal scales. In the Earth sciences, research in time-lapse SfM photogrammetry or videogrammetry is an area that is difficult to undertake due to complexities in acquiring, processing and managing large 4D datasets and represents an area with significant advancement potential (Eltner et al. 2016). In this study, we investigate the potential of 4D time-lapse SfM to monitor unstable rock slopes. We tested an array of statically mounted cameras collecting time-lapse photos of a limestone rock slope located along a highway in Canada. Our setup consisted of 8 DSLR cameras with 50 mm prime lenses spaced 2-3 m apart at a distance of 10 m from the slope. The portion of the rock slope monitored was 20 m wide and 6 m high. We collected data in four phases, each having 50 photographs taken simultaneously by each camera. The first phase of photographs was taken of the stable slope. In each successive phase, we gradually moved small, discrete blocks within the rock slope by 5-15 mm, simulating pre-failure deformation of rockfall. During the last phase we also removed discrete rock blocks, simulating rockfall. We used Agisoft Photoscan's 4D processing functionality and timeline tools to create 3D point clouds from the time-lapse photographs. These tools have the benefit of attaining better accuracy photo alignments as a greater number of photos are used. For change detection, we used the 4D filtering and calibration technique proposed by Kromer et al. (2015), which takes advantage of high degrees of spatial and temporal point redundancy to decrease measurement uncertainty. Preliminary results show that it is possible to attain more accurate 3D models using time-lapse photos taken from an array of cameras than photos taken from a single camera from multiple positions. For this survey setup, it was possible to detect mm to cm level of changes, which is of sufficient accuracy to detect the pre-failure stage of rockfalls, as well as small rockfall events. Additionally, cameras mounted in a static array can be operated remotely and automatically. Time-lapse SfM photogrammetry can be a cost effective alternative to terrestrial laser scanning for rockfall prone areas and facilitates the study of surface processes with high spatial and temporal detail. We gratefully acknowledge support from the NSERC collaborative research and development grant. References Eltner, A., Kaiser, A., Castillo, C.; Rock, G., Neugirg, F., Abellán, A. Image-based surface reconstruction in geomorphometry—Merits, limits and developments. Earth Surf. Dyn. 2016, 4, 359-389. Kromer, R. A., Abellán, A., Hutchinson, D. J., Lato, M., Edwards, T., & Jaboyedoff, M. A 4D filtering and calibration technique for small-scale point cloud change detection with a terrestrial laser scanner. Remote Sensing 2015, 7(10), 13029-13052.

3D Time-lapse Imaging and Quantification of Mitochondrial Dynamics

NASA Astrophysics Data System (ADS)

Sison, Miguel; Chakrabortty, Sabyasachi; Extermann, Jérôme; Nahas, Amir; James Marchand, Paul; Lopez, Antonio; Weil, Tanja; Lasser, Theo

2017-02-01

We present a 3D time-lapse imaging method for monitoring mitochondrial dynamics in living HeLa cells based on photothermal optical coherence microscopy and using novel surface functionalization of gold nanoparticles. The biocompatible protein-based biopolymer coating contains multiple functional groups which impart better cellular uptake and mitochondria targeting efficiency. The high stability of the gold nanoparticles allows continuous imaging over an extended time up to 3000 seconds without significant cell damage. By combining temporal autocorrelation analysis with a classical diffusion model, we quantify mitochondrial dynamics and cast these results into 3D maps showing the heterogeneity of diffusion parameters across the whole cell volume.

Characterizing Uncertainty In Electrical Resistivity Tomography Images Due To Subzero Temperature Variability

NASA Astrophysics Data System (ADS)

Herring, T.; Cey, E. E.; Pidlisecky, A.

2017-12-01

Time-lapse electrical resistivity tomography (ERT) is used to image changes in subsurface electrical conductivity (EC), e.g. due to a saline contaminant plume. Temperature variation also produces an EC response, which interferes with the signal of interest. Temperature compensation requires the temperature distribution and the relationship between EC and temperature, but this relationship at subzero temperatures is not well defined. The goal of this study is to examine how uncertainty in the subzero EC/temperature relationship manifests in temperature corrected ERT images, especially with respect to relevant plume parameters (location, contaminant mass, etc.). First, a lab experiment was performed to determine the EC of fine-grained glass beads over a range of temperatures (-20° to 20° C) and saturations. The measured EC/temperature relationship was then used to add temperature effects to a hypothetical EC model of a conductive plume. Forward simulations yielded synthetic field data to which temperature corrections were applied. Varying the temperature/EC relationship used in the temperature correction and comparing the temperature corrected ERT results to the synthetic model enabled a quantitative analysis of the error of plume parameters associated with temperature variability. Modeling possible scenarios in this way helps to establish the feasibility of different time-lapse ERT applications by quantifying the uncertainty associated with parameter(s) of interest.

Geophysical Monitoring at the CO2SINK Site: Combining Seismic and Geoelectric Data

NASA Astrophysics Data System (ADS)

Giese, R.; Lüth, S.; Cosma, C.; Juhlin, C.; Kiessling, D.; Schütt, H.; Schöbel, B.; Schmidt-Hattenberger, C.; Schilling, F.; Co2SINK Group

2009-04-01

The CO2SINK project at the German town of Ketzin (near Berlin), is aimed at a pilot storage of CO2, and at developing and testing efficient integrated monitoring procedures (physical, chemical, and biological observations) for assessing the processes triggered within the reservoir by a long term injection operation. In particular, geophysical methods as seismic and geoelectric measurements have delivered the structural framework, and they enable to observe the reaction of the reservoir and the caprock to CO2 propagation at locations which are not accessible for direct observations. We report on the seismic monitoring program of the CO2SINK project which comprises baseline and repeat observations at different scales in time and space, combined with comprehensive geoelectrical monitoring performed in the Ketzin wells and on the surface. The main objectives of the 3D seismic survey (carried out in spring 2005) were to provide the structural model around the location of the Ketzin wells, to verify earlier geologic interpretations of structure based on vintage 2D seismic and borehole data, as well as providing a baseline for future seismic surveys. The uppermost 1000 m are well imaged and show an anticlinal structure with an east-west striking central graben on its top. The 3D baseline survey was extended by VSP (vertical seismic profiling), MSP (moving source profiling) on 7 profiles, and crosshole tomographic measurements. 2D "star" measurements were carried out on the 7 MSP profiles in order to tie-in the down-hole surveys with the 3D baseline survey. These measurements provide enhanced resolution in time (faster and more cost effective than a full 3D survey) and space (higher source and receiver frequencies). Three crosshole measurements were performed, one baseline survey in May 2008, and two repeats in July and August 2008, respectively. A third crosshole repeat is planned for a later stage in the project when a steady state situation has been reached in the reservoir between the two observation boreholes Ktzi 200 and Ktzi 202. The interpretation of the time lapse crosshole seismic measurements is still work in progress. A time lapse effect can be recognized on cross correlations of baseline and repeat data indicating that considering the full wave form of the recordings does have the potential to locate subtle changes in the seismic properties of the reservoir due to CO2 injection. In addition, we show the results of the site-specific geoelectrical monitoring concept VERA (Vertical Electrical Resistivity Array), which covers electrical resistivity measurements in all three Ketzin wells. The array consists of 45 permanent electrodes (15 in each well), placed on the electrically insulated casings of the wells in the 600 m to 750 m depth range with a spacing of 10 m. This layout has been designed according to numerical forward modeling assuming electrical properties of pre- and post-injection scenarios. In addition to the geoelectric downhole measurement setup, surface to surface, and surface to downhole measurements are added in order to enlarge the area of observation between the three Ketzin wells to a hemispherical area (with a radius of about 1.5 km) around the wells. First results of the Electrical Resistivity Tomography (ERT) fit the expected reservoir behaviour. Higher resistivity values (presently up to factor 3 compared to other horizons) represent the intervals of the sandstone reservoir as preferred pathways of the CO2 propagation.

Time-lapse ERT and DTS for seasonal and short-term monitoring of an alpine river hyporheic zone

NASA Astrophysics Data System (ADS)

Boaga, Jacopo; Laura, Busato; Mariateresa, Perri; Giorgio, Cassiani

2016-04-01

The hyporheic zone (HZ) is the area located beneath and adjacent to rivers and streams, where the interactions between surface water and groundwater take place. This complex physical domain allows the transport of several substances from a stream to the unconfined aquifer below, and vice versa, thus playing a fundamental role in the river ecosystem. The importance of the hyporheic zone makes its characterization a goal shared by several disciplines, which range from applied geophysics to biogeochemistry, from hydraulics to ecology. The frontier field of HZ characterization stays in applied non-invasive methodologies as Electrical Resistivity Tomography - ERT - and Distributed Temperature Sensing - DTS. ERT is commonly applied in cross-well configuration or with a superficial electrodes deployment while DTS is used in hydro-geophysics in the last decade, revealing a wide applicability to the typical issues of this field of study. DTS for hydro-geophysics studies is based on Raman scattering and employs heat as tracer and uses a fiber-optic cable to acquire temperature values. We applied both techniques for an alpine river case studies located in Val di Sole, TN, Italy. The collected measurements allow high-resolution characterization of the hyporheic zone, overcoming the critical problem of invasive measurements under riverbeds. In this work, we present the preliminary results regarding the characterization of the hyporheic zone of the alpine river obtained combining ERT and DTS time-lapse measurements. The data collection benefits from an innovative instrumentation deployment, which consists of both an ERT multicore cable and a DTS fiber-optic located in two separated boreholes drilled 5m under the watercourse and perpendicular to it. In particular we present the first year monitoring results and a short time-lapse monitoring experiment conducted during summer 2015. The site and the results here described are part of the EU FP7 CLIMB (Climate Induced Changes on the Hydrology of Mediterranean Basins) project.

Time-lapse photogrammetry in geomorphic studies

NASA Astrophysics Data System (ADS)

Eltner, Anette; Kaiser, Andreas

2017-04-01

Image based approaches to reconstruct the earth surface (Structure from Motion - SfM) are establishing as a standard technology for high resolution topographic data. This is amongst other advantages due to the comparatively ease of use and flexibility of data generation. Furthermore, the increased spatial resolution led to its implementation at a vast range of applications from sub-mm to tens-of-km scale. Almost fully automatic calculation of referenced digital elevation models allows for a significant increase of temporal resolution, as well, potentially up to sub-second scales. Thereby, the setup of a time-lapse multi-camera system is necessary and different aspects need to be considered: The camera array has to be temporary stable or potential movements need to be compensated by temporary stable reference targets/areas. The stability of the internal camera geometry has to be considered due to a usually significantly lower amount of images of the scene, and thus redundancy for parameter estimation, compared to more common SfM applications. Depending on the speed of surface change, synchronisation has to be very accurate. Due to the usual application in the field, changing environmental conditions important for lighting and visual range are also crucial factors to keep in mind. Besides these important considerations much potential is comprised by time-lapse photogrammetry. The integration of multi-sensor systems, e.g. using thermal cameras, enables the potential detection of other processes not visible with RGB-images solely. Furthermore, the implementation of low-cost sensors allows for a significant increase of areal coverage and their setup at locations, where a loss of the system cannot be ruled out. The usage of micro-computers offers smart camera triggering, e.g. acquiring images with increased frequency controlled by a rainfall-triggered sensor. In addition these micro-computers can enable on-site data processing, e.g. recognition of increased surface movement, and thus might be used as warning system in the case of natural hazards. A large variety of applications are suitable with time-lapse photogrammetry, i.e. change detection of all sorts; e.g. volumetric alterations, movement tracking or roughness changes. The multi-camera systems can be used for slope investigations, soil studies, glacier observation, snow cover measurement, volcanic surveillance or plant growth monitoring. A conceptual workflow is introduced highlighting the limits and potentials of time-lapse photogrammetry.

Continuous TDEM for monitoring shale hydraulic fracturing

NASA Astrophysics Data System (ADS)

Yan, Liang-Jun; Chen, Xiao-Xiong; Tang, Hao; Xie, Xing-Bing; Zhou, Lei; Hu, Wen-Bao; Wang, Zhong-Xin

2018-03-01

Monitoring and delineating the spatial distribution of shale fracturing is fundamentally important to shale gas production. Standard monitoring methods, such as time-lapse seismic, cross-well seismic and micro-seismic methods, are expensive, timeconsuming, and do not show the changes in the formation with time. The resistivities of hydraulic fracturing fluid and reservoir rocks were measured. The results suggest that the injection fluid and consequently the injected reservoir are characterized by very low resistivity and high chargeability. This allows using of the controlled-source electromagnetic method (CSEM) to monitor shale gas hydraulic fracturing. Based on the geoelectrical model which was proposed according to the well-log and seismic data in the test area the change rule of the reacted electrical field was studied to account for the change of shale resistivity, and then the normalized residual resistivity method for time lapse processing was given. The time-domain electromagnetic method (TDEM) was used to continuously monitor the shale gas fracturing at the Fulin shale gas field in southern China. A high-power transmitter and multi-channel transient electromagnetic receiver array were adopted. 9 h time series of Ex component of 224 sites which were laid out on the surface and over three fracturing stages of a horizontal well at 2800 m depth was recorded. After data processing and calculation of the normalized resistivity residuals, the changes in the Ex signal were determined and a dynamic 3D image of the change in resistivity was constructed. This allows modeling the spatial distribution of the fracturing fluid. The model results suggest that TDEM is promising for monitoring hydraulic fracturing of shale.

Control for monitoring thickness of high temperature refractory

DOEpatents

Caines, M.J.

1982-11-23

This invention teaches an improved monitoring device for detecting the changes in thickness of high-temperature refractory, the device consists of a probe having at least two electrically conductive generally parallel elements separated by a dielectric material. The probe is implanted or embedded directly in the refractory and is elongated to extend in line with the refractory thickness to be measured. Electrical inputs to the conductive elements provide that either or both the electrical conductance or capacitance can be found, so that charges over lapsed time periods can be compared in order to detect changes in the thickness of the refractory.

Seismic Signatures of Brine Release at Blood Falls, Taylor Glacier, Antarctica

NASA Astrophysics Data System (ADS)

Carr, C. G.; Pettit, E. C.; Carmichael, J.

2017-12-01

Blood Falls is created by the release of subglacially-sourced, iron-rich brine at the surface of Taylor Glacier, McMurdo Dry Valleys, Antarctica. The supraglacial portion of this hydrological feature is episodically active. Englacial liquid brine flow occurs despite ice temperatures of -17°C and we document supraglacial liquid brine release despite ambient air temperatures average -20°C. In this study, we use data from a seismic network, time-lapse cameras, and publicly available weather station data to address the questions: what are the characteristics of seismic events that occur during Blood Falls brine release and how do these compare with seismic events that occur during times of Blood Falls quiescence? How are different processes observable in the time-lapse imagery represented in the seismic record? Time-lapse photography constrains the timing of brine release events during the austral winter of 2014. We use a noise-adaptive digital power detector to identify seismic events and cluster analysis to identify repeating events based on waveform similarity across the network. During the 2014 wintertime brine release, high-energy repeated seismic events occurred proximal to Blood Falls. We investigate the ground motions associated with these clustered events, as well as their spatial distribution. We see evidence of possible tremor during the brine release periods, an indicator of fluid movement. If distinctive seismic signatures are associated with Blood Falls brine release they could be identified based solely on seismic data without any aid from time-lapse cameras. Passive seismologic monitoring has the benefit of continuity during the polar night and other poor visibility conditions, which make time-lapse imagery unusable.

Near-surface temperature lapse rates in a mountainous catchment in the Chilean Andes

NASA Astrophysics Data System (ADS)

Ayala; Schauwecker, S.; Pellicciotti, F.; McPhee, J. P.

2011-12-01

In mountainous areas, and in the Chilean Andes in particular, the irregular and sparse distribution of recording stations resolves insufficiently the variability of climatic factors such as precipitation, temperature and relative humidity. Assumptions about air temperature variability in space and time have a strong effect on the performance of hydrologic models that represent snow processes such as accumulation and ablation. These processes have large diurnal variations, and assumptions that average over longer time periods (days, weeks or months) may reduce the predictive capacity of these models under different climatic conditions from those for which they were calibrated. They also introduce large uncertainties when such models are used to predict processes with strong subdiurnal variability such as snowmelt dynamics. In many applications and modeling exercises, temperature is assumed to decrease linearly with elevation, using the free-air moist adiabatic lapse rate (MALR: 0.0065°C/m). Little evidence is provided for this assumption, however, and recent studies have shown that use of lapse rates that are uniform in space and constant in time is not appropriate. To explore the validity of this approach, near-surface (2 m) lapse rates were calculated and analyzed at different temporal resolution, based on a new data set of spatially distributed temperature sensors setup in a high elevation catchment of the dry Andes of Central Chile (approx. 33°S). Five minutes temperature data were collected between January 2011 and April 2011 in the Ojos de Agua catchment, using two Automatic Weather Stations (AWSs) and 13 T-loggers (Hobo H8 Pro Temp with external data logger), ranging in altitude from 2230 to 3590 m.s.l.. The entire catchment was snow free during our experiment. We use this unique data set to understand the main controls over temperature variability in time and space, and test whether lapse rates can be used to describe the spatial variations of air temperature in a high elevation catchment. Our main result is that the assumption of a MALR is appropriate to describe the average variability of temperature over the entire measurement period (and possibly for daily scales), but that hourly near-surface lapse rates vary considerably and can deviate strongly from the MALR. This diurnal variability in lapse rates is associated with changes in wind direction and variations in wind velocity. Shallow lapse rates, in particular, occur during the morning, in correspondence to low wind speeds and change in wind direction from katabatic wind to valley wind and are associated with a weaker correlation between air temperature and elevation, while steeper lapse rates (meaning by this that temperature decreases more with elevation) closer to the MALR are typical of the afternoon hours from 13.00 on (and correspond to high wind speed), and are representative of a more linear dependency between air temperature and elevation. The steepest LRs, however, occur in the evening at 20.00-21.00, when wind velocity drops again and wind direction changes from valley wind to katabatic wind. It is clear that the wind regime is the main controls on LRs variability, and it is important to validate these findings with data sets from a second season.

Quantitative Estimation of Seismic Velocity Changes Using Time-Lapse Seismic Data and Elastic-Wave Sensitivity Approach

NASA Astrophysics Data System (ADS)

Denli, H.; Huang, L.

2008-12-01

Quantitative monitoring of reservoir property changes is essential for safe geologic carbon sequestration. Time-lapse seismic surveys have the potential to effectively monitor fluid migration in the reservoir that causes geophysical property changes such as density, and P- and S-wave velocities. We introduce a novel method for quantitative estimation of seismic velocity changes using time-lapse seismic data. The method employs elastic sensitivity wavefields, which are the derivatives of elastic wavefield with respect to density, P- and S-wave velocities of a target region. We derive the elastic sensitivity equations from analytical differentiations of the elastic-wave equations with respect to seismic-wave velocities. The sensitivity equations are coupled with the wave equations in a way that elastic waves arriving in a target reservoir behave as a secondary source to sensitivity fields. We use a staggered-grid finite-difference scheme with perfectly-matched layers absorbing boundary conditions to simultaneously solve the elastic-wave equations and the elastic sensitivity equations. By elastic-wave sensitivities, a linear relationship between relative seismic velocity changes in the reservoir and time-lapse seismic data at receiver locations can be derived, which leads to an over-determined system of equations. We solve this system of equations using a least- square method for each receiver to obtain P- and S-wave velocity changes. We validate the method using both surface and VSP synthetic time-lapse seismic data for a multi-layered model and the elastic Marmousi model. Then we apply it to the time-lapse field VSP data acquired at the Aneth oil field in Utah. A total of 10.5K tons of CO2 was injected into the oil reservoir between the two VSP surveys for enhanced oil recovery. The synthetic and field data studies show that our new method can quantitatively estimate changes in seismic velocities within a reservoir due to CO2 injection/migration.

Reconsidering the Device in the Drawer: Lapses as a Design Opportunity in Personal Informatics

PubMed Central

Epstein, Daniel A.; Kang, Jennifer H.; Pina, Laura R.; Fogarty, James; Munson, Sean A.

2017-01-01

People stop using personal tracking tools over time, referred to as the lapsing stage of their tool use. We explore how designs can support people when they lapse in tracking, considering how to design data representations for a person who lapses in Fitbit use. Through a survey of 141 people who had lapsed in using Fitbit, we identified three use patterns and four perspectives on tracking. Participants then viewed seven visual representations of their Fitbit data and seven approaches to framing this data. Participant Fitbit use and perspective on tracking influenced their preference, which we surface in a series of contrasts. Specifically, our findings guide selecting appropriate aggregations from Fitbit use (e.g., aggregate more when someone has less data), choosing an appropriate framing technique from tracking perspective (e.g., ensure framing aligns with how the person feels about tracking), and creating appropriate social comparisons (e.g., portray the person positively compared to peers). We conclude by discussing how these contrasts suggest new designs and opportunities in other tracking domains. PMID:28516173

Oersted: The Beginnings of Electromagnetism. Experiment No. 17.

ERIC Educational Resources Information Center

Devons, Samuel

Presented is a discussion of the events of the 20-year lapse between the invention of the pile in 1800 by Volta, and Hans Christian Oersted's famous definitive paper "Effects of a Current of Electricity on the Magnetic Needle." Students are thus enabled to appreciate the climate of the time and the manner and significance of Oersted's discovery.…

A clustering approach applied to time-lapse ERT interpretation - Case study of Lascaux cave

NASA Astrophysics Data System (ADS)

Xu, Shan; Sirieix, Colette; Riss, Joëlle; Malaurent, Philippe

2017-09-01

The Lascaux cave, located in southwest France, is one of the most important prehistoric cave in the world that shows Paleolithic paintings. This study aims to characterize the structure of the weathered epikarst setting located above the cave using Time-Lapse Electrical Resistivity Tomography (ERT) combined with local hydrogeological and climatic environmental data. Twenty ERT profiles were carried out for two years and helped us to record the seasonal and spatial variations of the electrical resistivity of the hydraulic upstream area of the Lascaux cave. The 20 interpreted resistivity models were merged into a single synthetic model using a multidimensional statistical method (Hierarchical Agglomerative Clustering). The individual blocks from the synthetic model associated with a similar resistivity variability were gathered into 7 clusters. We combined the resistivity temporal variations with climatic and hydrogeological data to propose a geo-electrical model that relates to a conceptual geological model. We provide a geological interpretation for each cluster regarding epikarst features. The superficial clusters (no 1 & 2) are linked to effective rainfall and trees, probably a fractured limestone. Another two clusters (no 6 & 7) are linked to detrital formations (sand and clay respectively). The cluster 3 may correspond to a marly limestone that forms a non-permeable horizon. Finally, the electrical behavior of the last two clusters (no 4 & 5) is correlated with the variation of flow rate; they may be a privileged feed zone of the flow in the cave.

Estimation of seismically detectable portion of a gas plume: CO2CRC Otway project case study

NASA Astrophysics Data System (ADS)

Pevzner, Roman; Caspari, Eva; Bona, Andrej; Galvin, Robert; Gurevich, Boris

2013-04-01

CO2CRC Otway project comprises of several experiments involving CO2/CH4 or pure CO2 gas injection into different geological formations at the Otway test site (Victoria, Australia). During the first stage of the project, which was finished in 2010, more than 64,000 t of gas were injected into the depleted gas reservoir at ~2 km depth. At the moment, preparations for the next stage of the project aiming to examine capabilities of seismic monitoring of small scale injection (up to 15,000 t) into saline formation are ongoing. Time-lapse seismic is one of the most typical methods for CO2 geosequestration monitoring. Significant experience was gained during the first stage of the project through acquisition and analysis of the 4D surface seismic and numerous time-lapse VSP surveys. In order to justify the second stage of the project and optimise parameters of the experiment, several modelling studies were conducted. In order to predict seismic signal we populate realistic geological model with elastic properties, model their changes using fluid substitution technique applied to the fluid flow simulation results and compute synthetic seismic baseline and monitor volumes. To assess detectability of the time-lapse signal caused by the injection, we assume that the time-lapse noise level will be equivalent to the level of difference between the last two Otway 3D surveys acquired in 2009 and 2010 using conventional surface technique (15,000 lbs vibroseis sources and single geophones as the receivers). In order to quantify the uncertainties in plume imaging/visualisation due to the time-lapse noise realisation we propose to use multiple noise realisations with the same F-Kx-Ky amplitude spectra as the field noise for each synthetic signal volume. Having signal detection criterion defined in the terms of signal/time- lapse noise level on a single trace we estimate visible portion of the plume as a function of this criterion. This approach also gives an opportunity to attempt to evaluate probability of the signal detection. The authors acknowledge the funding provided by the Australian government through its CRC program to support this CO2CRC research project. We also acknowledge the CO2CRC's corporate sponsors and the financial assistance provided through Australian National Low Emissions Coal Research and Development (ANLEC R&D). ANLEC R&D is supported by Australian Coal Association Low Emissions Technology Limited and the Australian Government through the Clean Energy Initiative.

Analysis of absorption and spreading of moisturizer on the microscopic region of the skin surface with near-infrared imaging.

PubMed

Arimoto, H; Yanai, M; Egawa, M

2016-11-01

Near-infrared (NIR) light with high water absorption enables us to visualize the water content distribution appeared in the superficial skin layer. The light penetration depth with the wavelength of 1920 nm is almost 100 μm from the skin surface. Thus, the water distribution in the stratum corneum can be effectively imaged by detecting the wavelength band around 1920 nm. The aim of this article was to measure the time-lapse behavior of the tiny droplet of the moisturizer spreading on the skin surface by imaging in 1920 nm wavelength band for investigating the correlation with the traditional index of the skin condition such as the water content and transepidermal water loss (TEWL). Experiment is performed with three moisturizer products and seven volunteer subjects. The NIR image is acquired by an originally designed imaging scope equipped with the white light of the strong brightness [super continuum (SC) light], the bandpass filter with the center wavelength of 1920 nm, and the NIR image sensor. A tiny droplet of the moisturizer is put on the surface of the skin and the time-lapse images are saved. Each acquired image is analyzed from a view point of the droplet area and elapsed time for absorption into the skin. The water content and TEWL of all subjects are measured by the conventional electrical method for investigating the relationship with the measured droplet dynamics parameters. Elapsed time for moisturizer droplet to be absorbed into the skin, the droplet area just before absorption for three moisturizer products, skin water contents, and TEWL for seven subjects were measured and correlation coefficients for each parameters were calculated. It was found that the skin with higher water contents or lower TEWL absorbed the moisturizer faster and spreads moisturizer wider. Also absorption and spreading speed depend on moisturizer property (moisturizing or fresh) which is originated from the moisturizer constituents. The correlation values between the moisturizer dynamics on the skin surface and the traditional index of the skin property were clarified. It was found that the skin with the high water content or low TEWL absorbs the moisturizer droplet fast. The spreading area depends not only on the skin property but on the constituents of the moisturizers. © 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Fuel Cell Backup Power Geographical Visualization Map (Fact Sheet)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

2012-12-01

This NREL Hydrogen and Fuel Cell Technical Highlight describes a time-lapse geographical visualization map of early market use of fuel cells for telecommunications backup power. The map synthesizes data being analyzed by NREL's Technology Validation team for the U.S. Department of Energy (DOE) Fuel Cell Technologies Program with DOE's publicly available annual summaries of electric disturbance events.

Field Evaluation of Two Geophysical Techniques for Real-Time Mapping of Smouldering Remediation (STAR)

NASA Astrophysics Data System (ADS)

Trento, L. M.; Tsourlos, P.; McMaster, M.; Liefl, D.; Sims, A.; Dominguez, J. L. G.; Vidumsky, J.; Gerhard, J.

2016-12-01

Self-sustaining Treatment for Active Remediation (STAR) technology destroys non-aqueous phase liquid (NAPL) in situ using principles of smouldering combustion. It involves propagating an exothermic (400-1000C) oxidation reaction outwards from an ignition well. A full-scale STAR system is currently being applied at an industrial site contaminated with coal tar below the water table in New Jersey, USA. STAR is typically tracked using multi-level thermocouples, which are discrete and sparse in space and time. This study evaluates two surface-based geophysical methods - Electrical Resistivity Tomography (ERT) and Self-Potential (SP) - for the ability to map the STAR reaction in real time at the New Jersey site. Both techniques involve placing electrode arrays on the surface and monitoring electrical signals over time (i.e., time-lapse). It is hypothesized that ERT should be able to monitor the resistive dry zone that precedes the reaction front and/or the growing NAPL-depleted zone. SP is expected to be able to detect the potential difference associated with thermal gradients generated by the reaction. Approximately 72 ERT electrodes in a "swiss cross" pattern plus 10 SP electrodes will be emplaced over single STAR treatment cell (six ignition wells). This setup will be employed to monitor both a deep (25 feet) and shallow (8 feet) STAR treatments. The geophysics will be complemented by in situ temperature measurements, continuous gas measurements, and pre- and post-treatment coring. The primary goal of this research is to evaluate the effectiveness of using ERT and SP for STAR under field conditions. The tests will be conducted in August 2016.

Geophysical Assessment of the Control of a Jetty on a Barrier Beach and Estuary System

NASA Astrophysics Data System (ADS)

Ulrich, C.; Hubbard, S. S.; Peterson, J.; Blom, K.; Black, W.; Delaney, C.; Mendoza, J.

2014-12-01

An evaluation is underway at the Goat Rock State Park, located at the mouth of the Russian River near Jenner, CA, to quantify the influence of a man made jetty on the functioning of a barrier beach and associated implications for estuary fish habitat and flood control. Flow through the beach results from water level differences between the estuary and the ocean. When the estuary is closed or perched, one of the major sources of outflow from the lagoon is seepage flow through the barrier beach. The location and design of the jetty could be altering subsurface flow paths through the jetty and possibly impeding subsurface flow where the jetty is still intact. This will result in unnatural connectivity between the ocean and the estuary leading to atypical surface water elevations and possibly salinity imbalance. We are monitoring seepage through the jetty and beach berm with multiple surface and borehole geophysical methods, including: electrical resistivity (ERT), seismic refraction (SR), ground penetrating radar (GPR), and electromagnetic methods (EM). We use SR data to characterize deeper bedrock controls on beach barrier functioning; ERT and EM methods to characterize the beach sediment layers that could contribute to preferential flow paths during tide cycles in addition to preferential flow paths created by the jetty structure; time-lapse ERT and EM data to monitor moisture changes and mixing of saline and fresh water within the beach berm, and borehole ERT and GPR data to delineate the geometry of the (often buried) jetty. Preliminary ERT and EM results indicate two preferential flow paths through zones of missing jetty structure, while time-lapse borehole ERT data is expected to image saltwater flow impedance in zones of intact jetty structure. All data are being integrated with topography, tidal, borehole, and hydrological information and the results of the assessment will enable the Sonoma County Water Agency to develop the feasibility of alternatives to the existing jetty that may help achieve target estuarine water surface elevations.

Fundamental Study of Energy Storage for Electric Railway Combining Electric Double-layer Capacitors and Battery

NASA Astrophysics Data System (ADS)

Konishi, Takeshi; Hase, Shin-Ichi; Nakamichi, Yoshinobu; Nara, Hidetaka; Uemura, Tadashi

The methods to stabilize power sources, which are the measures against voltage drop, power loading fluctuation, regenerative power lapse and so on, have been important issues in DC railway feeding circuits. Therefore, an energy storage medium that uses power efficiently and reduces above-mentioned problems is much concerned about. Electric double-layer capacitors (EDLC) can be charged and discharged rapidly in a short time with large power. On the other hand, a battery has a high energy density so that it is proper to be charged and discharged for a long time. Therefore, from a viewpoint of load pattern for electric railway, hybrid energy storage system combining both energy storage media may be effective. This paper introduces two methods for hybrid energy system theoretically, and describes the results of the fundamental tests.

Spatial and temporal variations of thaw layer thickness and its controlling factors identified using time-lapse electrical resistivity tomography and hydro-thermal modeling

NASA Astrophysics Data System (ADS)

Tran, Anh Phuong; Dafflon, Baptiste; Bisht, Gautam; Hubbard, Susan S.

2018-06-01

Quantitative understanding of controls on thaw layer thickness (TLT) dynamics in the Arctic peninsula is essential for predictive understanding of permafrost degradation feedbacks to global warming and hydrobiochemical processes. This study jointly interprets electrical resistivity tomography (ERT) measurements and hydro-thermal numerical simulation results to assess spatiotemporal variations of TLT and to determine its controlling factors in Barrow, Alaska. Time-lapse ERT measurements along a 35-m transect were autonomously collected from 2013 to 2015 and inverted to obtain soil electrical resistivity. Based on several probe-based TLT measurements and co-located soil electrical resistivity, we estimated the electrical resistivity thresholds associated with the boundary between the thaw layer and permafrost using a grid search optimization algorithm. Then, we used the obtained thresholds to derive the TLT from all soil electrical resistivity images. The spatiotemporal analysis of the ERT-derived TLT shows that the TLT at high-centered polygons (HCPs) is smaller than that at low-centered polygons (LCPs), and that both thawing and freezing occur earlier at the HCPs compared to the LCPs. In order to provide a physical explanation for dynamics in the thaw layer, we performed 1-D hydro-thermal simulations using the community land model (CLM). Simulation results showed that air temperature and precipitation jointly govern the temporal variations of TLT, while the topsoil organic content (SOC) and polygon morphology are responsible for its spatial variations. When the topsoil SOC and its thickness increase, TLT decreases. Meanwhile, at LCPs, a thicker snow layer and saturated soil contribute to a thicker TLT and extend the time needed for TLT to freeze and thaw. This research highlights the importance of combination of measurements and numerical modeling to improve our understanding spatiotemporal variations and key controls of TLT in cold regions.

Finding buried metallic pipes using a non-destructive approach based on 3D time-domain induced polarization data

NASA Astrophysics Data System (ADS)

Shao, Zhenlu; Revil, André; Mao, Deqiang; Wang, Deming

2018-04-01

The location of buried utility pipes is often unknown. We use the time-domain induced polarization method to non-intrusively localize metallic pipes. A new approach, based on injecting a primary electrical current between a pair of electrodes and measuring the time-lapse voltage response on a set of potential electrodes after shutting down this primary current is used. The secondary voltage is measured on all the electrodes with respect to a single electrode used as a reference for the electrical potential, in a way similar to a self-potential time lapse survey. This secondary voltage is due to the formation of a secondary current density in the ground associated with the polarization of the metallic pipes. An algorithm is designed to localize the metallic object using the secondary voltage distribution by performing a tomography of the secondary source current density associated with the polarization of the pipes. This algorithm is first benchmarked on a synthetic case. Then, two laboratory sandbox experiments are performed with buried metallic pipes located in a sandbox filled with some clean sand. In Experiment #1, we use a horizontal copper pipe while in Experiment #2 we use an inclined stainless steel pipe. The result shows that the method is effective in localizing these two pipes. At the opposite, electrical resistivity tomography is not effective in localizing the pipes because they may appear resistive at low frequencies. This is due to the polarization of the metallic pipes which blocks the charge carriers at its external boundaries.

Near-surface air temperature lapse rates in Xinjiang, northwestern China

NASA Astrophysics Data System (ADS)

Du, Mingxia; Zhang, Mingjun; Wang, Shengjie; Zhu, Xiaofan; Che, Yanjun

2018-02-01

Lapse rates of near-surface (2 m) air temperature are important parameters in hydrologic and climate simulations, especially for the mountainous areas without enough in-situ observations. In Xinjiang, northwestern China, the elevations range from higher than 7000 m to lower than sea level, but the existing long-term meteorological measurements are limited and distributed unevenly. To calculate lapse rates in Xinjiang, the daily data of near-surface air temperature ( T min, T ave, and T max) were measured by automatic weather stations from 2012 to 2014. All the in situ observation stations were gridded into a network of 1.5° (latitude) by 1.5° (longitude), and the spatial distribution and the daily, monthly, seasonal variations of lapse rates for T min, T ave, and T max in Xinjiang are analyzed. The Urumqi River Basin has been considered as a case to study the influence of elevation, aspect, and the wet and dry air conditions to the T min, T ave, and T max lapse rates. Results show that (1) the lapse rates for T min, T ave, and T max vary spatially during the observation period. The spatial diversity of T min lapse rates is larger than that of T ave, and that of T max is the smallest. For each season, T max lapse rates have more negative values than T ave lapse rates which are steeper than T min lapse rates. The weakest spatial diversity usually appears in July throughout a year. (2) The comparison for the three subregions (North, Middle, and South region) exhibits that lapse rates have similar day-to-day and month-to-month characteristics which present shallower values in winter months and steeper values in summer months. The T ave lapse rates in North region are shallower than those in Middle and South region, and the steepest T ave lapse rates of the three regions all appear in April. T min lapse rates are shallower than T max lapse rates. The maximum medians of T min and T max lapse rates for each grid in the three regions all appear in January, whereas the minimum medians all concentrate in July. (3) The seasonality of T min, T ave, and T max in Xinjiang is also observed. An increasing trend from summer to winter and a decreasing trend from winter to next summer can be seen clearly. (4) The inversion phenomenon is obvious in the Urumqi River Basin and appears in March, November, December, January, and February. The great inversion phenomenon days (24 days) and persistent inversion phenomenon days (12 days) present in January. The influences of elevation and aspect are complex. Lapse rates for T ave, T min, and T max are steeper under humid air conditions, while dry air conditions lead to shallower lapse rates.

Predictors of lapse in first week of smoking abstinence in PTSD and non-PTSD smokers.

PubMed

Beckham, Jean C; Calhoun, Patrick S; Dennis, Michelle F; Wilson, Sarah M; Dedert, Eric A

2013-06-01

Retrospective research suggests smokers with posttraumatic stress disorder (PTSD) lapse more quickly after their quit date. Ecological momentary assessment (EMA) research is needed to confirm the presence of early smoking lapse in PTSD and form conceptualizations that inform intervention. Smokers with (n = 55) and without (n = 52) PTSD completed alarm-prompted EMA of situational and psychiatric variables the week before and after a quit date, and self-initiated EMA following smoking lapses. Blood samples at baseline and on the quit date allowed assessment of dehydroepiandrosterone (DHEA) and dehydroepiandrosterone sulfate (DHEA(S)). PTSD was related to shorter time to lapse (hazard ratio [HR] = 1.677, 95% CI: 1.106-2.544). Increased smoking abstinence self-efficacy was related to longer time to lapse (HR = 0.608, 95% CI: 0.430-0.860). Analyses of participants' real-time reports revealed that smokers with PTSD were more likely to attribute first-time lapses to negative affect ( = 5.412, p = .020), and trauma reminders (Fisher's exact p = .003**). Finally, the quit date decrease in DHEA(S) was related to shorter time to lapse (HR = 1.009, 95% CI: 1.000-1.018, p < .05). Results provide evidence of shorter time to first smoking lapse in PTSD, and add to evidence that early lapse occasions are more strongly related to trauma reminders, negative affect, and cravings in smokers with PTSD.

One year analysis of time-lapse electrical data on a clayey landslide: identification of elementary hydrological processes

NASA Astrophysics Data System (ADS)

Gance, Julien; Sailhac, Pascal; Malet, Jean-Philippe; Supper, Robert; Jochum, Birgit; Ottowittz, David; Grandjean, Gilles

2014-05-01

Water infiltration, evaporation and runoff are responsible of changes in the topsoil water content and can influence slope stability which is very often the main controlling factor of landslide triggering. In this work, time-lapse monitoring of electrical conductivity is used to observe variations in soil water contents. Based on recent work which demonstrated the possibility of monitoring the hydrological response of a clayey slope to controlled rainfall experiments, we installed an electrical monitoring system at the Super-Sauze landslide for long-term observation. We used the GEOMON4D resistivimeter (developed by the Austrian Geological Surve) and specifically designed for experiments needing high rate of data acquisition, records of full signal samples for noise detection, remote controlled management and automatic data transfer. The electrode positions varying with time, we installed two cameras to control the position of the electrodes. Several hydrological sensors were also installed along the profile to measure soil temperature, groundwater temperature, groundwater level, groundwater conductivity and soil humidity. The challenge is the processing of 4.2 million of electrical resistivity data. In this difficult context, the possible factors controlling changes in resistivity values are the movement of the electrodes, the soil and water temperature, the change of porosity due to compaction and the soil degree of saturation. Therefore, before any inversion, the presence of possible 3D effects, and the measurement accuracy and uncertainty are assessed. A threshold in apparent resistivity change that could correspond to a change in soil saturation is determined. From those results, we investigate variations in the apparent resistivity. Responses to different hydrological processes (soil freezing/thawing, snow-melting, intense rainfall) occurring during the period of study are detected on resistivity values inversed on short periods.

Electrical Imaging of Infiltration in Agricultural Soils on Long Island, New York

NASA Astrophysics Data System (ADS)

Lampousis, A.; Kenyon, P. M.; Sanwald, K.; Steiner, N.

2007-12-01

High resolution electrical resistivity imaging of vadose zone infiltration experiments was conducted on agricultural soils by the City College and Graduate Center of CUNY, in cooperation with Cornell University's Agricultural Stewardship Program and Long Island Horticultural Research and Extension Center (LIHREC) in Riverhead, New York. Measurements were made in active vineyards with a commercial resistivity imaging system, using a half- meter electrode spacing. Soils considered were Riverhead sandy loam (RdA), Haven loam (HaA), and Bridgehampton silty loam (BgA). The Riverhead and Haven soils are the most common types found on eastern Long Island. The Bridgehampton is considered the most fertile. Soil samples and measurements of soil compaction were collected at the same time as the geophysical measurements. In addition, remote sensing data were obtained for the three sites and processed to produce normalized difference vegetation index (NDVI) data to evaluate potential correlations between vegetation vigor, soil texture and water migration patterns. Applications of this study include continuous water content monitoring in high value cash crops (precision agriculture). Changes in electrical resistivity during infiltration are clearly visible at all three locations. Preliminary analysis of the results shows correlations of baseline resistivity with particle size distributions and correlations between changes in resistivity during infiltration and soil compaction data. Time-lapse electrical images of the three sites will also be compared with published properties for these soils, including particle size distribution, saturated hydraulic conductivity, available water capacity, and surface texture.

Time-Lapse 3D Inversion of Complex Conductivity Data Using an Active Time Constrained (ATC) Approach

EPA Science Inventory

Induced polarization (more precisely the magnitude and the phase of the impedance of the subsurface) is measured using a network of electrodes located at the ground surface or in boreholes. This method yields important information related to the distribution of permeability and ...

Capturing change: the duality of time-lapse imagery to acquire data and depict ecological dynamics

USGS Publications Warehouse

Brinley Buckley, Emma M.; Allen, Craig R.; Forsberg, Michael; Farrell, Michael; Caven, Andrew J.

2017-01-01

We investigate the scientific and communicative value of time-lapse imagery by exploring applications for data collection and visualization. Time-lapse imagery has a myriad of possible applications to study and depict ecosystems and can operate at unique temporal and spatial scales to bridge the gap between large-scale satellite imagery projects and observational field research. Time-lapse data sequences, linking time-lapse imagery with data visualization, have the ability to make data come alive for a wider audience by connecting abstract numbers to images that root data in time and place. Utilizing imagery from the Platte Basin Timelapse Project, water inundation and vegetation phenology metrics are quantified via image analysis and then paired with passive monitoring data, including streamflow and water chemistry. Dynamic and interactive time-lapse data sequences elucidate the visible and invisible ecological dynamics of a significantly altered yet internationally important river system in central Nebraska.

Time-lapse cinemicrography and scanning electron microscopy of platelet formation by megakaryocytes.

PubMed

Haller, C J; Radley, J M

1983-01-01

The surface architecture of megakaryocytes undergoing platelet formation in vitro has been examined by time-lapse cinemicrography and scanning electron microscopy. Fragments of mouse bone marrow were placed in culture medium and incubated at 37 degrees C. After several hours mature megakaryocytes migrated out of the marrow and some underwent shape changes so that they eventually appeared as a relatively small central body, housing the nucleus, from which emerged a number of thin processes which resembled platelet chains. Scanning electron microscopy showed that initially the megakaryocyte surface was ruffled but with development of processes it became smoother. Circumferential folds of small amplitude were found on the surface of developing constrictions which separated putative platelets. It is thought they may be associated with the mechanism of extension, but could have a role in establishing the topography of membrane components. Rupture of the chains and release of platelets was not observed; this permits the number of putative platelets formed by individual megakaryocytes to be determined. The putative platelets exhibited features common to circulating platelets when exposed to a glass surface including the development of pseudopodia and, eventually, flattening on to the surface.

Challenges of using electrical resistivity method to locate karst conduits-A field case in the Inner Bluegrass Region, Kentucky

USGS Publications Warehouse

Zhu, J.; Currens, J.C.; Dinger, J.S.

2011-01-01

Conduits serve as major pathways for groundwater flow in karst aquifers. Locating them from the surface, however, is one of the most challenging tasks in karst research. Geophysical methods are often deployed to help locate voids by mapping variations of physical properties of the subsurface. Conduits can cause significant contrasts of some physical properties that can be detected; other subsurface features such as water-bearing fractures often yield similar contrasts, which are difficult to distinguish from the effects of the conduits. This study used electrical resistivity method to search for an unmapped karst conduit that recharges Royal Spring in the Inner Bluegrass karst region, Kentucky, USA. Three types of resistivity techniques (surface 2D survey, quasi-3D survey, and time-lapse survey) were used to map and characterize resistivity anomalies. Some of the major anomalies were selected as drilling targets to verify the existence of the conduits. Drilling near an anomaly identified by an electrical resistivity profile resulted in successful penetration of a major water-filled conduit. The drilling results also suggest that, in this study area, low resistivity anomalies in general are associated with water-bearing features. However, differences in the anomaly signals between the water-filled conduit and other water-bearing features such as water-filled fracture zones were undistinguishable. The electrical resistivity method is useful in conduit detection by providing potential drilling targets. Knowledge of geology and hydrogeology about the site and professional judgment also played important roles in locating the major conduit. ?? 2011 Elsevier B.V.

Validation of satellite-retrieved MBL cloud properties using DOE ARM AMF measurements at the Azores

NASA Astrophysics Data System (ADS)

Xi, B.; Dong, X.; Minnis, P.; Sun-Mack, S.

2013-05-01

Marine Boundary Layer (MBL) cloud properties derived for the Clouds and the Earth's Radiant Energy System (CERES) Project using Terra and Aqua Moderate Resolution Imaging Spectroradiometer (MODIS) data are compared with observations taken at the Atmospheric Radiation Measurement (ARM) AMF AZORES site from June 2009 through December 2010. Retrievals from ARM surface-based data were averaged over a 1-hour interval centered at the time of each satellite overpass, and the CERES-MODIS Ed4 cloud properties were averaged within a 30-km x 30-km box centered on the ARM AZORES site. Two datasets were analyzed: all of the single-layered unbroken decks (SL) and those cases without temperature inversions. The CERES-MODIS cloud top/base heights were determined from cloud top/base temperature by using a lapse rate method normalized to the 24-h mean surface air temperature. The preliminary results show: for all SL MBL at daytime, they are, on average, 0.148 km (cloud top) and 0.087 km (cloud base) higher than the ARM radar-lidar observed cloud top and base, respectively. At nighttime, they are 0.446 km (cloud top) and 0.334 km (cloud base). For those cases without temperature inversions, the comparisons are close to their SL counterparts. For cloud temperatures, the MODIS-derived cloud-top and -base temperatures are 1.6 K lower and 0.4 K higher than the surface values with correlations of 0.92 during daytime. At nighttime, the differences are slightly larger and correlations are lower than daytime comparisons. Variations in the height difference are mainly caused by uncertainties in the surface air temperatures and lapse rates. Based on a total of 61 daytime and 87 nighttime samples (ALL SL cases), the temperature inversion layers occur about 72% during daytime and 83% during nighttime. The difference of surface-observed lapse rate and the satellite derived lapse rate can be 1.6 K/km for daytime and 3.3K/km for nighttime. From these lapse rates, we can further analyze the surface air temperature difference that used to calculate these lapse rate, which are ~3K difference between surface-observed and the satellite derived during the daytime and 5.1 K during nighttime. Further studies of the cause of the temperature inversions that may help the cloud heights retrievals by satellite. The preliminary comparisons in MBL microphysical properties have shown that the averaged CERES-MODIS derived MBL cloud-droplet effective radius is only 1.5 μm larger than ARM retrieval (13.2 μm), and LWP values are also very close to each other (112 vs. 124 gm-2) with a relative large difference in optical depth (10.6 vs. 14.4).

Monitoring the spatial and temporal evolution of slope instability with Digital Image Correlation

NASA Astrophysics Data System (ADS)

Manconi, Andrea; Glueer, Franziska; Loew, Simon

2017-04-01

The identification and monitoring of ground deformation is important for an appropriate analysis and interpretation of unstable slopes. Displacements are usually monitored with in-situ techniques (e.g., extensometers, inclinometers, geodetic leveling, tachymeters and D-GPS), and/or active remote sensing methods (e.g., LiDAR and radar interferometry). In particular situations, however, the choice of the appropriate monitoring system is constrained by site-specific conditions. Slope areas can be very remote and/or affected by rapid surface changes, thus hardly accessible, often unsafe, for field installations. In many cases the use of remote sensing approaches might be also hindered because of unsuitable acquisition geometries, poor spatial resolution and revisit times, and/or high costs. The increasing availability of digital imagery acquired from terrestrial photo and video cameras allows us nowadays for an additional source of data. The latter can be exploited to visually identify changes of the scene occurring over time, but also to quantify the evolution of surface displacements. Image processing analyses, such as Digital Image Correlation (known also as pixel-offset or feature-tracking), have demonstrated to provide a suitable alternative to detect and monitor surface deformation at high spatial and temporal resolutions. However, a number of intrinsic limitations have to be considered when dealing with optical imagery acquisition and processing, including the effects of light conditions, shadowing, and/or meteorological variables. Here we propose an algorithm to automatically select and process images acquired from time-lapse cameras. We aim at maximizing the results obtainable from large datasets of digital images acquired with different light and meteorological conditions, and at retrieving accurate information on the evolution of surface deformation. We show a successful example of application of our approach in the Swiss Alps, more specifically in the Great Aletsch area, where slope instability was recently reactivated due to the progressive glacier retreat. At this location, time-lapse cameras have been installed during the last two years, ranging from low-cost and low-resolution webcams to more expensive high-resolution reflex cameras. Our results confirm that time-lapse cameras provide quantitative and accurate measurements of surface deformation evolution over space and time, especially in situations when other monitoring instruments fail.

Hydrogeophysical monitoring of water infiltration processes

NASA Astrophysics Data System (ADS)

Bevilacqua, Ivan; Cassiani, Giorgio; Deiana, Rita; Canone, Davide; Previati, Maurizio

2010-05-01

Non-invasive subsurface monitoring is growing in the last years. Techniques like ground-penetrating radar (GPR) and electrical resistivity tomography (ERT) can be useful in soil water content monitoring (e.g., Vereecken et al., 2006). Some problems remain (e.g. spatial resolution), but the scale is consistent with many applications and hydrological models. The research has to to provide even more quantitative tools, without remaining in the qualitative realm. This is a very crucial step in the way to provide data useful for hydrological modeling. In this work a controlled field infiltration experiment has been done in August 2009 in the experimental site of Grugliasco, close to the Agricultural Faculty of the University of Torino, Italy. The infiltration has been monitored in time lapse by ERT, GPR, and TDR (Time Domain Reflectometry). The sandy soil characteristics of the site has been already described in another experiment [Cassiani et al. 2009a].The ERT was èperformed in dipole-dipole configuration, while the GPR had 100 MHz and 500 MHz antennas in WARR configuration. The TDR gages had different lengths. The amount of water which was sprinkled was also monitored in time.Irrigation intensity has been always smaller than infiltration capacity, in order not toh ave any surface ponding. Spectral induced polarization has been used to infer constitutive parameters from soil samples [Cassiani et al. 2009b]. 2D Richards equation model (Manzini and Ferraris, 2004) has been then calibrated with the measurements. References. Cassiani, G., S. Ferraris, M. Giustiniani, R. Deiana and C.Strobbia, 2009a, Time-lapse surface-to-surface GPR measurements to monitor a controlled infiltration experiment, in press, Bollettino di Geofisica Teorica ed Applicata, Vol. 50, 2 Marzo 2009, pp. 209-226. Cassiani, G., A. Kemna, A.Villa, and E. Zimmermann, 2009b, Spectral induced polarization for the characterization of free-phase hydrocarbon contamination in sediments with low clay content, Near Surface Geophysics, special issue on Hydrogeophysics, p. 547-562. Manzini G., and Ferraris S. 2004. Mass-conservative finite-volume methods on 2-D unstructured grids for the Richards equation, 'Advances in Water Resources' 27(12):1199-1215, 2004. content with ground penetrating radar: A review. Vadose Zone Journal 2, 476-491. Vereecken H., Binley A., Cassiani G., Kharkhordin I., Revil A. and Titov K. 2006. Applied Hydrogeophysics. Springer-Verlag.

Using Intensive Longitudinal Data Collected via Mobile Phone to Detect Imminent Lapse in Smokers Undergoing a Scheduled Quit Attempt.

PubMed

Businelle, Michael S; Ma, Ping; Kendzor, Darla E; Frank, Summer G; Wetter, David W; Vidrine, Damon J

2016-10-17

Mobile phone‒based real-time ecological momentary assessments (EMAs) have been used to record health risk behaviors, and antecedents to those behaviors, as they occur in near real time. The objective of this study was to determine if intensive longitudinal data, collected via mobile phone, could be used to identify imminent risk for smoking lapse among socioeconomically disadvantaged smokers seeking smoking cessation treatment. Participants were recruited into a randomized controlled smoking cessation trial at an urban safety-net hospital tobacco cessation clinic. All participants completed in-person EMAs on mobile phones provided by the study. The presence of six commonly cited lapse risk variables (ie, urge to smoke, stress, recent alcohol consumption, interaction with someone smoking, cessation motivation, and cigarette availability) collected during 2152 prompted or self-initiated postcessation EMAs was examined to determine whether the number of lapse risk factors was greater when lapse was imminent (ie, within 4 hours) than when lapse was not imminent. Various strategies were used to weight variables in efforts to improve the predictive utility of the lapse risk estimator. Participants (N=92) were mostly female (52/92, 57%), minority (65/92, 71%), 51.9 (SD 7.4) years old, and smoked 18.0 (SD 8.5) cigarettes per day. EMA data indicated significantly higher urges (P=.01), stress (P=.002), alcohol consumption (P<.001), interaction with someone smoking (P<.001), and lower cessation motivation (P=.03) within 4 hours of the first lapse compared with EMAs collected when lapse was not imminent. Further, the total number of lapse risk factors present within 4 hours of lapse (mean 2.43, SD 1.37) was significantly higher than the number of lapse risk factors present during periods when lapse was not imminent (mean 1.35, SD 1.04), P<.001. Overall, 62% (32/52) of all participants who lapsed completed at least one EMA wherein they reported ≥3 lapse risk factors within 4 hours of their first lapse. Differentially weighting lapse risk variables resulted in an improved risk estimator (weighted area=0.76 vs unweighted area=0.72, P<.004). Specifically, 80% (42/52) of all participants who lapsed had at least one EMA with a lapse risk score above the cut-off within 4 hours of their first lapse. Real-time estimation of smoking lapse risk is feasible and may pave the way for development of mobile phone‒based smoking cessation treatments that automatically tailor treatment content in real time based on presence of specific lapse triggers. Interventions that identify risk for lapse and automatically deliver tailored messages or other treatment components in real time could offer effective, low cost, and highly disseminable treatments to individuals who do not have access to other more standard cessation treatments.

Surface geophysical methods for characterising frozen ground in transitional permafrost landscapes

USGS Publications Warehouse

Briggs, Martin A.; Campbell, Seth; Nolan, Jay; Walvoord, Michelle Ann; Ntarlagiannis, Dimitrios; Day-Lewis, Frederick D.; Lane, John W.

2017-01-01

The distribution of shallow frozen ground is paramount to research in cold regions, and is subject to temporal and spatial changes influenced by climate, landscape disturbance and ecosystem succession. Remote sensing from airborne and satellite platforms is increasing our understanding of landscape-scale permafrost distribution, but typically lacks the resolution to characterise finer-scale processes and phenomena, which are better captured by integrated surface geophysical methods. Here, we demonstrate the use of electrical resistivity imaging (ERI), electromagnetic induction (EMI), ground penetrating radar (GPR) and infrared imaging over multiple summer field seasons around the highly dynamic Twelvemile Lake, Yukon Flats, central Alaska, USA. Twelvemile Lake has generally receded in the past 30 yr, allowing permafrost aggradation in the receded margins, resulting in a mosaic of transient frozen ground adjacent to thick, older permafrost outside the original lakebed. ERI and EMI best evaluated the thickness of shallow, thin permafrost aggradation, which was not clear from frost probing or GPR surveys. GPR most precisely estimated the depth of the active layer, which forward electrical resistivity modelling indicated to be a difficult target for electrical methods, but could be more tractable in time-lapse mode. Infrared imaging of freshly dug soil pit walls captured active-layer thermal gradients at unprecedented resolution, which may be useful in calibrating emerging numerical models. GPR and EMI were able to cover landscape scales (several kilometres) efficiently, and new analysis software showcased here yields calibrated EMI data that reveal the complicated distribution of shallow permafrost in a transitional landscape.

Time-lapse 3-D measurements of a glucose biosensor in multicellular spheroids by light sheet fluorescence microscopy in commercial 96-well plates

NASA Astrophysics Data System (ADS)

Maioli, Vincent; Chennell, George; Sparks, Hugh; Lana, Tobia; Kumar, Sunil; Carling, David; Sardini, Alessandro; Dunsby, Chris

2016-11-01

Light sheet fluorescence microscopy has previously been demonstrated on a commercially available inverted fluorescence microscope frame using the method of oblique plane microscopy (OPM). In this paper, OPM is adapted to allow time-lapse 3-D imaging of 3-D biological cultures in commercially available glass-bottomed 96-well plates using a stage-scanning OPM approach (ssOPM). Time-lapse 3-D imaging of multicellular spheroids expressing a glucose Förster resonance energy transfer (FRET) biosensor is demonstrated in 16 fields of view with image acquisition at 10 minute intervals. As a proof-of-principle, the ssOPM system is also used to acquire a dose response curve with the concentration of glucose in the culture medium being varied across 42 wells of a 96-well plate with the whole acquisition taking 9 min. The 3-D image data enable the FRET ratio to be measured as a function of distance from the surface of the spheroid. Overall, the results demonstrate the capability of the OPM system to measure spatio-temporal changes in FRET ratio in 3-D in multicellular spheroids over time in a multi-well plate format.

Time-lapse 3-D measurements of a glucose biosensor in multicellular spheroids by light sheet fluorescence microscopy in commercial 96-well plates.

PubMed

Maioli, Vincent; Chennell, George; Sparks, Hugh; Lana, Tobia; Kumar, Sunil; Carling, David; Sardini, Alessandro; Dunsby, Chris

2016-11-25

Light sheet fluorescence microscopy has previously been demonstrated on a commercially available inverted fluorescence microscope frame using the method of oblique plane microscopy (OPM). In this paper, OPM is adapted to allow time-lapse 3-D imaging of 3-D biological cultures in commercially available glass-bottomed 96-well plates using a stage-scanning OPM approach (ssOPM). Time-lapse 3-D imaging of multicellular spheroids expressing a glucose Förster resonance energy transfer (FRET) biosensor is demonstrated in 16 fields of view with image acquisition at 10 minute intervals. As a proof-of-principle, the ssOPM system is also used to acquire a dose response curve with the concentration of glucose in the culture medium being varied across 42 wells of a 96-well plate with the whole acquisition taking 9 min. The 3-D image data enable the FRET ratio to be measured as a function of distance from the surface of the spheroid. Overall, the results demonstrate the capability of the OPM system to measure spatio-temporal changes in FRET ratio in 3-D in multicellular spheroids over time in a multi-well plate format.

Time-lapse 3-D measurements of a glucose biosensor in multicellular spheroids by light sheet fluorescence microscopy in commercial 96-well plates

PubMed Central

Maioli, Vincent; Chennell, George; Sparks, Hugh; Lana, Tobia; Kumar, Sunil; Carling, David; Sardini, Alessandro; Dunsby, Chris

2016-01-01

Light sheet fluorescence microscopy has previously been demonstrated on a commercially available inverted fluorescence microscope frame using the method of oblique plane microscopy (OPM). In this paper, OPM is adapted to allow time-lapse 3-D imaging of 3-D biological cultures in commercially available glass-bottomed 96-well plates using a stage-scanning OPM approach (ssOPM). Time-lapse 3-D imaging of multicellular spheroids expressing a glucose Förster resonance energy transfer (FRET) biosensor is demonstrated in 16 fields of view with image acquisition at 10 minute intervals. As a proof-of-principle, the ssOPM system is also used to acquire a dose response curve with the concentration of glucose in the culture medium being varied across 42 wells of a 96-well plate with the whole acquisition taking 9 min. The 3-D image data enable the FRET ratio to be measured as a function of distance from the surface of the spheroid. Overall, the results demonstrate the capability of the OPM system to measure spatio-temporal changes in FRET ratio in 3-D in multicellular spheroids over time in a multi-well plate format. PMID:27886235

Time-Lapse Monitoring with 4D Seismic Coda Waves in Active, Passive and Ambient Noise Data

NASA Astrophysics Data System (ADS)

Lumley, D. E.; Kamei, R.; Saygin, E.; Shragge, J. C.

2017-12-01

The Earth's subsurface is continuously changing, due to temporal variations in fluid flow, stress, temperature, geomechanics and geochemistry, for example. These physical changes occur at broad tectonic and earthquake scales, and also at very detailed near-surface and reservoir scales. Changes in the physical states of the earth cause time-varying changes in the physical properties of rocks and fluids, which can be monitored with natural or manmade seismic waves. Time-lapse (4D) seismic monitoring is important for applications related to natural and induced seismicity, hydrocarbon and groundwater reservoir depletion, CO2 sequestration etc. An exciting new research area involves moving beyond traditional methods in order to use the full complex time-lapse scattered wavefield (4D coda waves) for both manmade active-source 3D/4D seismic data, and also to use continuous recordings of natural-source passive seismic data, especially (micro) earthquakes and ocean ambient noise. This research involves full wave-equation approaches including waveform inversion (FWI), interferometry, Large N sensor arrays, "big data" information theory, and high performance supercomputing (HPC). I will present high-level concepts and recent data results that are quite spectacular and highly encouraging.

Corrosion Control Through a Better Understanding of the Metallic Substrate/Organic Coating/Interface.

DTIC Science & Technology

1981-11-01

and the cyclohexane over molecular sieves, -79- pm NO pAalB hION fl i4a and then measuring the ppm of water in the cyclohexane using the Karl Fischer ... potentiometric titration using a method outlined by Bell [J. Polymer Sci. 8, 417-36 (1970)]. The procedure for epoxy groups involves the re- action with...with time, earliest stages of coating delamination, and secondary processes that occur was obtained by time lapse photography. Electrical methods are

Utilizing time-lapse micro-CT-correlated bisphosphonate binding kinetics and soft tissue-derived input functions to differentiate site-specific changes in bone metabolism in vivo.

PubMed

Tower, R J; Campbell, G M; Müller, M; Glüer, C C; Tiwari, S

2015-05-01

The turnover of bone is a tightly regulated process between bone formation and resorption to ensure skeletal homeostasis. This process differs between bone types, with trabecular bone often associated with higher turnover than cortical bone. Analyses of bone by micro-computed tomography (micro-CT) reveal changes in structure and mineral content, but are limited in the study of metabolic activity at a single time point, while analyses of serum markers can reveal changes in bone metabolism, but cannot delineate the origin of any aberrant findings. To obtain a site-specific assessment of bone metabolic status, bisphosphonate binding kinetics were utilized. Using a fluorescently-labeled bisphosphonate, we show that early binding kinetics monitored in vivo using fluorescent molecular tomography (FMT) can monitor changes in bone metabolism in response to bone loss, stimulated by ovariectomy (OVX), or bone gain, resulting from treatment with the anabolic bone agent parathyroid hormone (PTH), and is capable of distinguishing different, metabolically distinct skeletal sites. Using time-lapse micro-CT, longitudinal bone turnover was quantified. The spine showed a significantly greater percent resorbing volume and surface in response to OVX, while mice treated with PTH showed significantly greater resorbing volume per bone surface in the spine and significantly greater forming surfaces in the knee. Correlation studies between binding kinetics and micro-CT suggest that forming surfaces, as assessed by time-lapse micro-CT, are preferentially reflected in the rate constant values while forming and resorbing bone volumes primarily affect plateau values. Additionally, we developed a blood pool correction method which now allows for quantitative multi-compartment analyses to be conducted using FMT. These results further expand our understanding of bisphosphonate binding and the use of bisphosphonate binding kinetics as a tool to monitor site-specific changes in bone metabolism in vivo. Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

Ambient Seismic Noise Monitoring of Time-lapse Velocity Changes During CO2 Injection at Otway, South Australia

NASA Astrophysics Data System (ADS)

Saygin, E.; Lumley, D. E.

2017-12-01

We use continuous seismic data recorded with an array of 909 buried geophones at Otway, South Australia, to investigate the potential of using ambient seismic noise for time-lapse monitoring of the subsurface. The array was installed prior to a 15,000 ton CO2 injection in 2016-17, in order to detect and monitor the evolution of the injected CO2 plume, and any associated microseismic activity. Continuously recorded data from the vertical components of the geophone array were cross-correlated to retrieve the inter-station Green's functions. The dense collection of Green's functions contains diving body waves and surface Rayleigh waves. Green's Functions were then compared with each other at different time frames including the pre-injection period to track subtle changes in the travel times due to the CO2 injection. Our results show a clear change in the velocities of Green's functions at the start of injection for both body waves and surface waves for wave paths traversing the injection area, whereas the observed changes are much smaller for areas which are far from the injection well.

Presentation of a High Resolution Time Lapse 3D Groundwater Model of Metsähovi for Calculating the Gravity Effect of Groundwater in Local Scale

NASA Astrophysics Data System (ADS)

Hokkanen, T. M.; Hartikainen, A.; Raja-Halli, A.; Virtanen, H.; Makinen, J.

2015-12-01

INTRODUCTION The aim of this study is to construct a fine resolution time lapse groundwater (GW) model of Metsähovi (MH). GW, geological, and soil moisture (SM) data were collected for several years to achieve the goal. The knowledge of the behavior of the GW at local scale is essential for superconductive gravimeter (SG) investigations performing in MH. DESCRIPTION OF THE DATA Almost 50 sensors have been recorded SM data some 6 years with 1 to 5 minutes sampling frequency. The GW table has been monitored, both in bedrock and in soil, in many stages with all together 15 piezometers. Two geological sampling campaigns were conducted to get the knowledge of hydrological properties of soil in the study area of 200×200 m2 around SG station in MH. PRINCIPLE OF TIME LAPSE 3D HYDROGEOLOGICAL MODEL The model of study site consists of the surfaces of ground and bedrock gridded with 2×2 m2 resolution. The height of GW table was interpolated to 2×2×0.1 m3 grid between GW and SM monitoring points. Close to the outline of the study site and areas lacking of sensors GW table was defined by extrapolation and considering the geological information of the area. The bedrock porosity is 2% and soil porosity determined by geological information and SM recordings is from 5 to 35%. Only fully saturated media is considered in the time lapse model excluding unsaturated one. BENEFICIERS With a new model the fluctuation of GW table can be followed with ranging time lapses from 1 minute to 1 month. The gravity effect caused by the variation of GW table can be calculated more accurate than before in MH. Moreover, the new model can be validated and refined by measured gravity, i.e. hydrological model can be improved by SG recordings (Figure 1).

Time-lapse electric resistivity in a stressed mangrove forest to image the role of the root zone in porewater salt distribution

NASA Astrophysics Data System (ADS)

Downs, C. M.; Krauss, K.; Kruse, S.

2017-12-01

The movement and storage of porewater salts is poorly understood in mangrove forests with limited surface water exchange between the forest and neighboring lagoon. These mangroves are often the most stressed, and have the most unfavorable salinity balance that often transition to mortality during extreme drought. A time-lapse resistivity survey was conducted in a stressed mangrove forest over a diel period. Resistivity is sensitive to the entire soil volume, including fine roots. The objective was to image changes in porewater salinity structures around both mangrove trees, where roots can be a prolific contributor to soil volume, and a salt pan with little or no vegetation. Throughout the diel period, salt pan conductivities remained relatively constant. The most significant temporal changes occur in the root zone around mangrove trees. Particularly interesting is a drop in resistivity (increased conductivity) at sunset when transpiration from individual trees decreases (or even ceases), potentially identifying a cumulative concentration of salts around the mangrove root zone after a full day of transpiration. The resistivity gradient decreases immediately after its peak at sunset, potentially identifying the consequences of hydraulic redistribution in diluting soils surrounding trees immediately after transpiration ceases. This is quicker than expected, and may imply a very strong and rapid eco-hydrological connection in the tree-facilitated salinity balance essential to their survival under the most salinity-stressed environments. At sunrise, resistivity increases, further suggesting dilution of salts via hydraulic redistribution of fresh water from the tree into the upper soil layers, or suggests an accumulation of salts within roots when presumably less water is moving through the trees. Repeated electric resistivity arrays provide spatial and temporal information about these salts and contribute to an overall understanding of how stressed mangrove forests behave. The mangrove ecophysiology literature has suggested that such a balance should exist between tree water use and soil salinity concentration. Here, we document the diel pattern from the perspective of the soil for the first time, but need more surveys to develop conclusive ecosystem level impacts.

In Vivo Analysis of Alternative Modes of Breast Cancer Cell Invasion

DTIC Science & Technology

2010-05-01

mouse mammary tumor cells was characterized in 3-D culture by time-lapse videomicroscopy . Bright field time-lapse videomicroscopy revealed that the...role that cell signalling pathways play in tumor cell behavior. Working with 3-D gels and time-lapse videomicroscopy I have also gained an

Electromagnetic Measurements in an Active Oilfield Environment

NASA Astrophysics Data System (ADS)

Weiss, C. J.; Aur, K. A.; Schramm, K. A.; Aldridge, D. F.; O'rourke, W. T.

2016-12-01

An important issue in oilfield development is mapping fracture distributions (either natural or man-made) controlling subsurface fluid flow. Although microseismic monitoring has been successful in constraining fracture system geometry and dynamics, accurate interpretation of microseismic data can be confounded by factors such as complex or poorly-understood velocity distributions, reactivation of previously unknown faults and fractures, and the problem of relating flow patterns to the cloud of hypocenter locations. For the particular problem of hydrocarbon production, the question of which fractures remain sufficiently "open" to allow economical fluid extraction is critical. As a supplement to microseismic analysis, we are investigating a novel electromagnetic (EM) technique for detecting and mapping hydraulic fractures in a hydrocarbon or geothermal reservoir by introducing an electrically conductive contrast agent into the fracturing fluid. In the field experiment presented here, a proppant-filled fracture zone is illuminated by a large engineered antenna consisting of an insulated current-carrying cable, grounded to `Earth' near the wellhead, and grounded at the other end to the steel-cased borehole near the target. Time-lapse measurements of horizontal electric field are subsequently made on Earth's surface to map the change in subsurface conductivity due to proppant emplacement. As predicted by 3D numerical modelling, observed differences in electric field values are very small. While these numbers are above the noise floor of electric field sensors, pervasive anthropogenic EM noise and regional-scale magnetotelluric signals make extraction of the differences from the observed time series especially difficult. We present field-acquired data on ambient EM noise in an active oilfield environment and demonstrate techniques for extracting the difference signal due to proppant emplacement. These techniques include classical spectral methods along with estimation of time-domain Green's function by regularized, linear least squares methods.

A Modular and Affordable Time-Lapse Imaging and Incubation System Based on 3D-Printed Parts, a Smartphone, and Off-The-Shelf Electronics

PubMed Central

Schwan, Emil; Fatsis-Kavalopoulos, Nikos; Kreuger, Johan

2016-01-01

Time-lapse imaging is a powerful tool for studying cellular dynamics and cell behavior over long periods of time to acquire detailed functional information. However, commercially available time-lapse imaging systems are expensive and this has limited a broader implementation of this technique in low-resource environments. Further, the availability of time-lapse imaging systems often present workflow bottlenecks in well-funded institutions. To address these limitations we have designed a modular and affordable time-lapse imaging and incubation system (ATLIS). The ATLIS enables the transformation of simple inverted microscopes into live cell imaging systems using custom-designed 3D-printed parts, a smartphone, and off-the-shelf electronic components. We demonstrate that the ATLIS provides stable environmental conditions to support normal cell behavior during live imaging experiments in both traditional and evaporation-sensitive microfluidic cell culture systems. Thus, the system presented here has the potential to increase the accessibility of time-lapse microscopy of living cells for the wider research community. PMID:28002463

A Modular and Affordable Time-Lapse Imaging and Incubation System Based on 3D-Printed Parts, a Smartphone, and Off-The-Shelf Electronics.

PubMed

Hernández Vera, Rodrigo; Schwan, Emil; Fatsis-Kavalopoulos, Nikos; Kreuger, Johan

2016-01-01

Time-lapse imaging is a powerful tool for studying cellular dynamics and cell behavior over long periods of time to acquire detailed functional information. However, commercially available time-lapse imaging systems are expensive and this has limited a broader implementation of this technique in low-resource environments. Further, the availability of time-lapse imaging systems often present workflow bottlenecks in well-funded institutions. To address these limitations we have designed a modular and affordable time-lapse imaging and incubation system (ATLIS). The ATLIS enables the transformation of simple inverted microscopes into live cell imaging systems using custom-designed 3D-printed parts, a smartphone, and off-the-shelf electronic components. We demonstrate that the ATLIS provides stable environmental conditions to support normal cell behavior during live imaging experiments in both traditional and evaporation-sensitive microfluidic cell culture systems. Thus, the system presented here has the potential to increase the accessibility of time-lapse microscopy of living cells for the wider research community.

Time-Lapse Videos for Physics Education: Specific Examples

ERIC Educational Resources Information Center

Vollmer, Michael; Möllmann, Klaus-Peter

2018-01-01

There are many physics experiments with long time scales such that they are usually neither shown in the physics class room nor in student labs. However, they can be easily recorded with time-lapse cameras and the respective time-lapse videos allow qualitative and/or quantitative analysis of the underlying physics. Here, we present some examples…

Multi-frequency electrical and electromagnetic measurements for imaging water flows: application to catchment and landslide hydrology.

NASA Astrophysics Data System (ADS)

Lajaunie, Myriam; Sailhac, Pascal; Malet, Jean-Philippe; Larnier, Hugo; Gance, Julien; Gautier, Stéphanie; Pierret, Marie-Claire

2017-04-01

Imaging water flows in mountainous watersheds is a difficult task, not only because of the topography and the dimensions of the existing structures, but also because the soils and rocks consist of unsaturated porous and heterogeneous fractured media, leading to multi-scale water-flow properties. In addition, these properties can change in time, in relation to temperature, rainfall and biological forcings. Electrical properties are relevant proxies of the subsurface hydrological properties. In order to image water flows, we consider measurements of the complex electrical conductivity (conduction and polarization/chargeability effects) which translate into a frequency dependance of the conductivity at the sample scale. We further discuss the combined use of electromagnetic (CS-AMT) and electric (DC and IP) measurements at the slope scale. The solving of processing, calibration and modelling issues allows the estimation of hydrological properties (i.e. permeability, soil humidity) giving master constraints for slope-scale hydrological modelling. We illustrate the application of these methods for the identification of the hydrological role of weathered structures of granitic catchments (e.g. Strengbach, Vosges mountains, ca. 80 km from Strasbourg, North East France) where new AMT processing has been developed in the AMT dead band to improve DC electrical imaging. We also illustrate the use of these methods to document the seasonal regime of the groundwater of the Lodève landslide (unstable slope located at Pégairolles, foot of the Cévennes mountain, ca. 80 km from Montpellier, South of France) where a new detailed time-lapse DC and IP setup (surface and borehole) is being tested. The works are supported by the research projects HYDROCRISZTO and HYDROSLIDE, and the large infrastructure project CRITEX.

Time-lapse seismic waveform modelling and attribute analysis using hydromechanical models for a deep reservoir undergoing depletion

NASA Astrophysics Data System (ADS)

He, Y.-X.; Angus, D. A.; Blanchard, T. D.; Wang, G.-L.; Yuan, S.-Y.; Garcia, A.

2016-04-01

Extraction of fluids from subsurface reservoirs induces changes in pore pressure, leading not only to geomechanical changes, but also perturbations in seismic velocities and hence observable seismic attributes. Time-lapse seismic analysis can be used to estimate changes in subsurface hydromechanical properties and thus act as a monitoring tool for geological reservoirs. The ability to observe and quantify changes in fluid, stress and strain using seismic techniques has important implications for monitoring risk not only for petroleum applications but also for geological storage of CO2 and nuclear waste scenarios. In this paper, we integrate hydromechanical simulation results with rock physics models and full-waveform seismic modelling to assess time-lapse seismic attribute resolution for dynamic reservoir characterization and hydromechanical model calibration. The time-lapse seismic simulations use a dynamic elastic reservoir model based on a North Sea deep reservoir undergoing large pressure changes. The time-lapse seismic traveltime shifts and time strains calculated from the modelled and processed synthetic data sets (i.e. pre-stack and post-stack data) are in a reasonable agreement with the true earth models, indicating the feasibility of using 1-D strain rock physics transform and time-lapse seismic processing methodology. Estimated vertical traveltime shifts for the overburden and the majority of the reservoir are within ±1 ms of the true earth model values, indicating that the time-lapse technique is sufficiently accurate for predicting overburden velocity changes and hence geomechanical effects. Characterization of deeper structure below the overburden becomes less accurate, where more advanced time-lapse seismic processing and migration is needed to handle the complex geometry and strong lateral induced velocity changes. Nevertheless, both migrated full-offset pre-stack and near-offset post-stack data image the general features of both the overburden and reservoir units. More importantly, the results from this study indicate that integrated seismic and hydromechanical modelling can help constrain time-lapse uncertainty and hence reduce risk due to fluid extraction and injection.

In Vivo Analysis of Alternative Modes of Breast Cancer Cell Invasion

DTIC Science & Technology

2008-05-01

characterized in 3-D culture by time-lapse videomicroscopy . Bright field time-lapse videomicroscopy revealed that the MMTV-neu cells moved as both rounded...intricacies of cell signalling, and the role that cell signalling pathways play in tumor cell behavior. Working with 3-D gels and time-lapse videomicroscopy

Revealing the secret life of pre-implantation embryos by time-lapse monitoring: A review

PubMed Central

Faramarzi, Azita; Khalili, Mohammad Ali; Micara, Giulietta; Agha-Rahimi, Azam

2017-01-01

High implantation success following in vitro fertilization cycles are achieved via the transfer of embryos with the highest developmental competence. Multiple pregnancies as a result of the transfer of several embryos per cycle accompany with various complication. Thus, single-embryo transfer (SET) is the preferred practice in assisted reproductive technique (ART) treatment. In order to improve the pregnancy rate for SET, embryologists need reliable biomarkers to aid their selection of embryos with the highest developmental potential. Time-lapse technology is a noninvasive alternative conventional microscopic assessment. It provides uninterrupted and continues the survey of embryo development to transfer day. Today, there are four time-lapse systems that are commercially available for ART centers. In world and Iran, the first time lapse babies were born in 2010 and 2015, respectively, conceived by SET. Here, we review the use of time-lapse monitoring in the observation of embryogenesis as well as its role in SET. Although, the findings from our review support common use of time-lapse monitoring in ART centers; but, future large studies assessing this system in well-designed trials are necessary. PMID:28744520

High Lapse Rates in AIRS Retrieved Temperatures in Cold Air Outbreaks

NASA Technical Reports Server (NTRS)

Fetzer, Eric J.; Kahn, Brian; Olsen, Edward T.; Fishbein, Evan

2004-01-01

The Atmospheric Infrared Sounder (AIRS) experiment, on NASA's Aqua spacecraft, uses a combination of infrared and microwave observations to retrieve cloud and surface properties, plus temperature and water vapor profiles comparable to radiosondes throughout the troposphere, for cloud cover up to 70%. The high spectral resolution of AIRS provides sensitivity to important information about the near-surface atmosphere and underlying surface. A preliminary analysis of AIRS temperature retrievals taken during January 2003 reveals extensive areas of superadiabatic lapse rates in the lowest kilometer of the atmosphere. These areas are found predominantly east of North America over the Gulf Stream, and, off East Asia over the Kuroshio Current. Accompanying the high lapse rates are low air temperatures, large sea-air temperature differences, and low relative humidities. Imagery from a Visible / Near Infrared instrument on the AIRS experiment shows accompanying clouds. These lines of evidence all point to shallow convection in the bottom layer of a cold air mass overlying warm water, with overturning driven by heat flow from ocean to atmosphere. An examination of operational radiosondes at six coastal stations in Japan shows AIRS to be oversensitive to lower tropospheric lapse rates due to systematically warm near-surface air temperatures. The bias in near-surface air temperature is seen to be independent of sea surface temperature, however. AIRS is therefore sensitive to air-sea temperature difference, but with a warm atmospheric bias. A regression fit to radiosondes is used to correct AIRS near-surface retrieved temperatures, and thereby obtain an estimate of the true atmosphere-ocean thermal contrast in five subtropical regions across the north Pacific. Moving eastward, we show a systematic shift in this air-sea temperature differences toward more isothermal conditions. These results, while preliminary, have implications for our understanding of heat flow from ocean to atmosphere. We anticipate future improvements in the AIRS retrieval algorithm will lead to improved understanding of the exchange of sensible and latent heat from ocean to atmosphere, and more realistic near-surface lapse rates.

Identification of biogeochemical hot spots using time-lapse hydrogeophysics

NASA Astrophysics Data System (ADS)

Franz, T. E.; Loecke, T.; Burgin, A.

2016-12-01

The identification and monitoring of biogeochemical hot spots and hot moments is difficult using point based sampling techniques and sensors. Without proper monitoring and accounting of water, energy, and trace gas fluxes it is difficult to assess the environmental footprint of land management practices. One key limitation is optimal placement of sensors/chambers that adequately capture the point scale fluxes and thus a reasonable integration to landscape scale flux. In this work we present time-lapse hydrogeophysical imaging at an old agricultural field converted into a wetland mitigation bank near Dayton, Ohio. While the wetland was previously instrumented with a network of soil sensors and surface chambers to capture a suite of state variables and fluxes, we hypothesize that time-lapse hydrogeophysical imaging is an underutilized and critical reconnaissance tool for effective network design and landscape scaling. Here we combine the time-lapse hydrogeophysical imagery with the multivariate statistical technique of Empirical Orthogonal Functions (EOF) in order to isolate the spatial and temporal components of the imagery. Comparisons of soil core information (e.g. soil texture, soil carbon) from around the study site and organized within like spatial zones reveal statistically different mean values of soil properties. Moreover, the like spatial zones can be used to identify a finite number of future sampling locations, evaluation of the placement of existing sensors/chambers, upscale/downscale observations, all of which are desirable techniques for commercial use in precision agriculture. Finally, we note that combining the EOF analysis with continuous monitoring from point sensors or remote sensing products may provide a robust statistical framework for scaling observations through time as well as provide appropriate datasets for use in landscape biogeochemical models.

An ecological momentary intervention for smoking cessation: The associations of just-in-time, tailored messages with lapse risk factors.

PubMed

Hébert, Emily T; Stevens, Elise M; Frank, Summer G; Kendzor, Darla E; Wetter, David W; Zvolensky, Michael J; Buckner, Julia D; Businelle, Michael S

2018-03-01

Smartphone apps can provide real-time, tailored interventions for smoking cessation. The current study examines the effectiveness of a smartphone-based smoking cessation application that assessed risk for imminent smoking lapse multiple times per day and provided messages tailored to current smoking lapse risk and specific lapse triggers. Participants (N=59) recruited from a safety-net hospital smoking cessation clinic completed phone-based ecological momentary assessments (EMAs) 5 times/day for 3 consecutive weeks (1week pre-quit, 2weeks post-quit). Risk for smoking lapse was estimated in real-time using a novel weighted lapse risk estimator. With each EMA, participants received messages tailored to current level of risk for imminent smoking lapse and self-reported presence of smoking urge, stress, cigarette availability, and motivation to quit. Generalized linear mixed model analyses determined whether messages tailored to specific lapse risk factors were associated with greater reductions in these triggers than messages not tailored to specific triggers. Overall, messages tailored to smoking urge, cigarette availability, or stress corresponded with greater reductions in those triggers than messages that were not tailored to specific triggers (p's=0.02 to <0.001). Although messages tailored to stress were associated with greater reductions in stress than messages not tailored to stress, the association was non-significant (p=0.892) when only moments of high stress were included in the analysis. Mobile technology can be used to conduct real-time smoking lapse risk assessment and provide tailored treatment content. Findings provide initial evidence that tailored content may impact users' urge to smoke, stress, and cigarette availability. Copyright © 2017 Elsevier Ltd. All rights reserved.

Time-lapse imaging of neural development: zebrafish lead the way into the fourth dimension.

PubMed

Rieger, Sandra; Wang, Fang; Sagasti, Alvaro

2011-07-01

Time-lapse imaging is often the only way to appreciate fully the many dynamic cell movements critical to neural development. Zebrafish possess many advantages that make them the best vertebrate model organism for live imaging of dynamic development events. This review will discuss technical considerations of time-lapse imaging experiments in zebrafish, describe selected examples of imaging studies in zebrafish that revealed new features or principles of neural development, and consider the promise and challenges of future time-lapse studies of neural development in zebrafish embryos and adults. Copyright © 2011 Wiley-Liss, Inc.

[Embryo selection in IVF/ICSI cycles using time-lapse microscopy and the clinical outcomes].

PubMed

Chen, Minghao; Huang, Jun; Zhong, Ying; Quan, Song

2015-12-01

To compare the clinical outcomes of embryos selected using time-lapse microscopy and traditional morphological method in IVF/ICSI cycles and evaluate the clinical value of time-lapse microscopy in early embryo monitoring and selection. e retrospectively analyzed the clinical data of 139 IVF/ICSI cycles with embryo selection based on time-lapse monitoring (TLM group, n=68) and traditional morphological method (control group, n=71). The βHCG-positive rate, clinical pregnancy rate and embryo implantation rate were compared between the 2 groups. Subgroup analysis was performed in view of female patients age and the fertilization type. The βHCG-positive rate, clinical pregnancy rate and implantation rate were 66.2%, 61.8% and 47.1% in TLM group, significantly higher than those in the control group (47.9%, 43.7% and 30.3%, respectively; P<0.05). Compared with patients below 30 years of age, patients aged between 31 and 35 years benefited more from time-lapse monitoring with improved clinical outcomes. time-lapse monitoring significantly increased the βHCG-positive rate, clinical pregnancy rate and implantation rate for patients undergoing IVF cycles, but not for those undergoing ICSI or TESA cycles. Compared with those selected using traditional morphological method, the embryos selected with time-lapse microscopy have better clinical outcomes, especially in older patients (31-35 years of age) and in IVF cycles.

Exploring Time-Lapse Photography as a Means for Qualitative Data Collection

ERIC Educational Resources Information Center

Persohn, Lindsay

2015-01-01

Collecting information via time-lapse photography is nothing new. Scientists and artists have been using this kind of data since the late 1800s. However, my research and experiments with time-lapse have shown that great potential may lie in its application to educational and social scientific research methods. This article is part history, part…

A Method for Partitioning Surface and Subsurface Flow Using Rainfall Simulaton and Two-Dimensional Surface Electrical Resistivity Imaging

NASA Astrophysics Data System (ADS)

Carey, A. M.; Paige, G. B.; Miller, S. N.; Carr, B. J.; Holbrook, W. S.

2014-12-01

In semi-arid rangeland environments understanding how surface and subsurface flow processes and their interactions are influenced by watershed and rainfall characteristics is critical. However, it is difficult to resolve the temporal variations between mechanisms controlling these processes and challenging to obtain field measurements that document their interactions. Better insight into how these complex systems respond hydrologically is necessary in order to refine hydrologic models and decision support tools. We are conducting field studies integrating high resolution, two-dimensional surface electrical resistivity imaging (ERI) with variable intensity rainfall simulation, to quantify real-time partitioning of rainfall into surface and subsurface response. These studies are being conducted at the hillslope scale on long-term runoff plots on four different ecological sites in the Upper Crow Creek Watershed in southeastern Wyoming. Variable intensity rainfall rates were applied using the Walnut Gulch Rainfall Simulator in which intensities were increased incrementally from 49 to 180 mm hr-1 and steady-state runoff rates for each intensity were measured. Two 13.5 m electrode arrays at 0.5 m spacing were positioned on the surface perpendicular to each plot and potentials were measured at given time intervals prior to, during and following simulations using a dipole-dipole array configuration. The configuration allows for a 2.47 m depth of investigation in which magnitude and direction of subsurface flux can be determined. We used the calculated steady state infiltration rates to quantify the variability in the partial area runoff response on the ecological sites. Coupling this information with time-lapse difference inversions of ERI data, we are able to track areas of increasing and decreasing resistivity in the subsurface related to localized areas of infiltration during and following rainfall events. We anticipate implementing this method across a variety of ecological sites in the Upper Crow Creek in order to characterize the variable hydrologic response of this complex rangeland watershed. This information is being used to refine current physically based hydrologic models and watershed assessment tools.

Time-lapse videos for physics education: specific examples

NASA Astrophysics Data System (ADS)

Vollmer, Michael; Möllmann, Klaus-Peter

2018-05-01

There are many physics experiments with long time scales such that they are usually neither shown in the physics class room nor in student labs. However, they can be easily recorded with time-lapse cameras and the respective time-lapse videos allow qualitative and/or quantitative analysis of the underlying physics. Here, we present some examples from thermal physics (melting, evaporation, cooling) as well as diffusion processes

On the Resolvability of Steam Assisted Gravity Drainage Reservoirs Using Time-Lapse Gravity Gradiometry

NASA Astrophysics Data System (ADS)

Elliott, E. Judith; Braun, Alexander

2017-11-01

Unconventional heavy oil resource plays are important contributors to oil and gas production, as well as controversial for posing environmental hazards. Monitoring those reservoirs before, during, and after operations would assist both the optimization of economic benefits and the mitigation of potential environmental hazards. This study investigates how gravity gradiometry using superconducting gravimeters could resolve depletion areas in steam assisted gravity drainage (SAGD) reservoirs. This is achieved through modelling of a SAGD reservoir at 1.25 and 5 years of operation. Specifically, the density change structure identified from geological, petrological, and seismic observations is forward modelled for gravity and gradients. Three main parameters have an impact on the resolvability of bitumen depletion volumes and are varied through a suitable parameter space: well pair separation, depth to the well pairs, and survey grid sampling. The results include a resolvability matrix, which identifies reservoirs that could benefit from time-lapse gravity gradiometry monitoring. After 1.25 years of operation, during the rising phase, the resolvable maximum reservoir depth ranges between the surface and 230 m, considering a well pair separation between 80 and 200 m. After 5 years of production, during the spreading phase, the resolvability of depletion volumes around single well pairs is greatly compromised as the depletion volume is closer to the surface, which translates to a larger portion of the gravity signal. The modelled resolvability matrices were derived from visual inspection and spectral analysis of the gravity gradient signatures and can be used to assess the applicability of time-lapse gradiometry to monitor reservoir density changes.

HYDROGRAV - Hydrological model calibration and terrestrial water storage monitoring from GRACE gravimetry and satellite altimetry - First results

NASA Astrophysics Data System (ADS)

Andersen, O. B.; Krogh, P. E.; Michailovsky, C.; Bauer-Gottwein, P.; Christiansen, L.; Berry, P.; Garlick, J.

2008-12-01

Space-borne and ground-based time-lapse gravity observations provide new data for water balance monitoring and hydrological model calibration in the future. The HYDROGRAV project (www.hydrograv.dk) will explore the utility of time-lapse gravity surveys for hydrological model calibration and terrestrial water storage monitoring. Merging remote sensing data from GRACE with other remote sensing data like satellite altimetry and also ground based observations are important to hydrological model calibration and water balance monitoring of large regions and can serve as either supplement or as vital information in un-gauged regions. A system of GRACE custom designed Mass Concentration blocks (Mascons) have been designed to model time-variable gravity changes for the largest basins in Southern Africa (Zambezi, Okavango, Limpopo and Orange) covering an area of 9 mill km2 with a resolution of 1 by 1.25 degree. Satellite altimetry have been used to derive high resolution point-wise river height in some of the un-gauged rivers in the region by using dedicated retracking to recovers nearly un-interrupted time series over these rivers. First result from the HYDROGRAV project analyzing GRACE derived mass change from 2002 to 2008 along with in-situ gravity time-lapse observations and radar altimetry monitoring of surface water for the southern Africa river basins will be presented.

High-Resolution Time-Lapse Monitoring of Unsaturated Flow using Automated GPR Data Collection

NASA Astrophysics Data System (ADS)

Mangel, A. R.; Moysey, S. M.; Lytle, B. A.; Bradford, J. H.

2015-12-01

High-resolution ground-penetrating radar (GPR) data provide the detailed information required to image subsurface structures. Recent advances in GPR monitoring now also make it possible to study transient hydrologic processes, but high-speed data acquisition is critical for this application. We therefore highlight the capabilities of our automated system to acquire time-lapse, high-resolution multifold GPR data during infiltration of water into soils. The system design allows for fast acquisition of constant-offset (COP) and common-midpoint profiles (CMP) to monitor unsaturated flow at multiple locations. Qualitative interpretation of the unprocessed COPs can provide substantial information regarding the hydrologic response of the system, such as the complexities of patterns associated with the wetting of the soil and geophysical evidence of non-uniform propagation of a wetting front. While we find that unprocessed images are informative, we show that the spatial variability of velocity introduced by infiltration events can complicate the images and that migration of the data is an effective tool to improve interpretability of the time-lapse images. The ability of the system to collect high density CMP data also introduces the potential for improving the velocity model along with the image via reflection tomography in the post-migrated domain. We show that for both simulated and empirical time-lapse GPR profiles we can resolve a propagating wetting front in the soil that is in good agreement with the response of in-situ soil moisture measurements. The data from these experiments illustrate the importance of high-speed, high-resolution GPR data acquisition for obtaining insight about the dynamics of hydrologic events. Continuing research is aimed at improving the quantitative analysis of surface-based GPR monitoring data for identifying preferential flow in soils.

Disturbances of stem circumnutations evoked by wound-induced variation potentials in Helianthus annuus L.

PubMed

Stolarz, Maria; Dziubińska, Halina; Krupa, Maciej; Buda, Agnieszka; Trebacz, Kazimierz; Zawadzki, Tadeusz

2003-01-01

The relationship between evoked electrical activity and stem movements in three-week old sunflowers was demonstrated. Electrical potential changes (recorded by Ag/AgCl extracellular electrodes) and time-lapse images (from a top view camera) were recorded and analyzed. A heat stimulus applied to the tip of one of the second pair of leaves evoked a variation potential, transmitted basipetally along one side of the stem. After stimulation, disturbances of circumnutations occurred. They included: changes in the period, disorders in the elliptical shape, and, in some cases, reversion of direction (of movement). We suggest that asymmetrically propagated variation potential induces asymmetric stem shrinking and bending, which strongly disturbs circumnutations. Our results confirm the involvement of electrical potential changes in the mechanism of stem nutations.

A High-Latitude Winter Continental Low Cloud Feedback Suppresses Arctic Air Formation in Warmer Climates

NASA Astrophysics Data System (ADS)

Cronin, T.; Tziperman, E.; Li, H.

2015-12-01

High latitude continents have warmed much more rapidly in recent decades than the rest of the globe, especially in winter, and the maintenance of warm, frost-free conditions in continental interiors in winter has been a long-standing problem of past equable climates. It has also been found that the high-latitude lapse rate feedback plays an important role in Arctic amplification of climate change in climate model simulations, but we have little understanding of why lapse rates at high latitudes change so strongly with warming. To better understand these problems, we study Arctic air formation - the process by which a high-latitude maritime air mass is advected over a continent during polar night, cooled at the surface by radiation, and transformed into a much colder continental polar air mass - and its sensitivity to climate warming. We use a single-column version of the WRF model to conduct two-week simulations of the cooling process across a wide range of initial temperature profiles and microphysics schemes, and find that a low cloud feedback suppresses Arctic air formation in warmer climates. This cloud feedback consists of an increase in low cloud amount with warming, which shields the surface from radiative cooling, and increases the continental surface air temperature by roughly two degrees for each degree increase of the initial maritime surface air temperature. The time it takes for the surface air temperature to drop below freezing increases nonlinearly to ~10 days for initial maritime surface air temperatures of 20 oC. Given that this is about the time it takes an air mass starting over the Pacific to traverse the north American continent, this suggests that optically thick stratus cloud decks could help to maintain frost-free winter continental interiors in equable climates. We find that CMIP5 climate model runs show large increases in cloud water path and surface cloud longwave forcing in warmer climates, consistent with the proposed low-cloud feedback. The suppression of Arctic air formation with warming may act as a significant amplifier of climate change at high latitudes, and offers a mechanistic perspective on the high-latitude "lapse rate feedback" diagnosed in climate models.

Ecohydrologic Investigations of Shallow Lateral Subsurface Flow in Tropical Soils using Time-Lapse Surface Electrical Resistivity Tomography

NASA Astrophysics Data System (ADS)

Ogden, F. L.; Mojica, A.; Abebe, N. A.; Smithsonian Tropical Research Institute, Panama Canal Watershed Experiment, Agua Salud Project

2010-12-01

The hydrologic effects of deforestation and aforestation in the tropics remain an area of active research. Hydrologic predictions of land-use change effects remain elusive. One of the unique features of catchment hydrology in the tropics is the effect of intense, continuous biological activity by insects, shrubs, trees, and small mammals. Sapprolitic soils derived from weathered bedrock cover widespread areas. These soils have low matrix permeabilities on the order of 1 mm/h, are 10 to 20 m in thickness and have relatively low activity because they have been depleted of light cations by annual rainfall over 2000 mm. As part of the Smithsonian Tropical Research Institute, Panama Canal Watershed Experiment, Agua Salud Project, we have observed shallow subsurface flow in tropical soils in central Panama using an introduced salinity contrast and surface electrical resistivity tomography (ERT). In 2009 and 2010, experiments were conducted in a 30 year-old secondary succession forest, and in two former pasture sites that were planted with native timber species and teak, respectively, in 2008. At each site, saline water (NaCl tagged with LiBr) was introduced to the soil using two different methods: soil pits and ponded surface applications. Results showed the strongest response in the case of ponded surface applications with observed changes in resistivity between -50% and 50%. In soil pit applications, the change in electrical resistivity varied from -10% to 10%. Results suggest that in the case of surface application, a transient perched water table is created near the bottom of the bioturbation layer that activates the downslope macropore network and results in bulk flow velocities that are significantly higher than observed soil matrix permeabilities. When heavy rainfall occurred during tests, increased mobility of the salinity contrast more clearly showed the active layer where most flow occurred. Time-series ERT observations enabled measurements of downslope bulk flow velocities over 1 m/h, presumably due to the existing downslope macroporosity network. These observations are being used to estimate macroporosity network properties and constrain hydrologic model parameters in different land uses. These results show that these non-invasive tests are a useful tool to determine the distribution of downslope lateral flow generated from pit and surface-applied saline solutions. ERT experimental results from a hillslope-scale experiment in central Panama, showing change in electrical conductivity from 30-minutes to 330-minutes after continuous injection of salinity contrast at x=0.

In Vivo Analysis of Alternative Modes of Breast Cancer Cell Invasion

DTIC Science & Technology

2009-05-01

lapse videomicroscopy . Bright field time-lapse videomicroscopy revealed that the MMTV-neu cells moved as both round ed and e longated cells on a...behavior. Working with 3-D gel s and time-lapse videomicroscopy I hav e also gained an apprec iation of the way in which mammary tumor cells

Challenges in Extracting Information From Large Hydrogeophysical-monitoring Datasets

NASA Astrophysics Data System (ADS)

Day-Lewis, F. D.; Slater, L. D.; Johnson, T.

2012-12-01

Over the last decade, new automated geophysical data-acquisition systems have enabled collection of increasingly large and information-rich geophysical datasets. Concurrent advances in field instrumentation, web services, and high-performance computing have made real-time processing, inversion, and visualization of large three-dimensional tomographic datasets practical. Geophysical-monitoring datasets have provided high-resolution insights into diverse hydrologic processes including groundwater/surface-water exchange, infiltration, solute transport, and bioremediation. Despite the high information content of such datasets, extraction of quantitative or diagnostic hydrologic information is challenging. Visual inspection and interpretation for specific hydrologic processes is difficult for datasets that are large, complex, and (or) affected by forcings (e.g., seasonal variations) unrelated to the target hydrologic process. New strategies are needed to identify salient features in spatially distributed time-series data and to relate temporal changes in geophysical properties to hydrologic processes of interest while effectively filtering unrelated changes. Here, we review recent work using time-series and digital-signal-processing approaches in hydrogeophysics. Examples include applications of cross-correlation, spectral, and time-frequency (e.g., wavelet and Stockwell transforms) approaches to (1) identify salient features in large geophysical time series; (2) examine correlation or coherence between geophysical and hydrologic signals, even in the presence of non-stationarity; and (3) condense large datasets while preserving information of interest. Examples demonstrate analysis of large time-lapse electrical tomography and fiber-optic temperature datasets to extract information about groundwater/surface-water exchange and contaminant transport.

Analysis of sources of bulk conductivity change in saturated silica sand after unbuffered TCE oxidation by permanganate.

PubMed

Hort, Ryan D; Revil, André; Munakata-Marr, Junko

2014-09-01

Time lapse resistivity surveys could potentially improve monitoring of permanganate-based in situ chemical oxidation (ISCO) of organic contaminants such as trichloroethene (TCE) by tracking changes in subsurface conductivity that result from injection of permanganate and oxidation of the contaminant. Bulk conductivity and pore fluid conductivity changes during unbuffered TCE oxidation using permanganate are examined through laboratory measurements and conductivity modeling using PHREEQC in fluid samples and porous media samples containing silica sand. In fluid samples, oxidation of one TCE molecule produces three chloride ions and one proton, resulting in an increase in fluid electrical conductivity despite the loss of two permanganate ions in the reaction. However, in saturated sand samples in which up to 8mM TCE was oxidized, at least 94% of the fluid conductivity associated with the presence of protons was removed within 3h of sand contact, most likely through protonation of silanol groups found on the surface of the sand grains. Minor conductivity effects most likely associated with pH-dependent reductive dissolution of manganese dioxide were also observed but not accounted for in pore-fluid conductivity modeling. Unaccounted conductivity effects resulted in an under-calculation of post-reaction pore fluid conductivity of 2.1% to 5.5%. Although small increases in the porous media formation factor resulting from precipitation of manganese dioxide were detected (about 3%), these increases could not be confirmed to be statistically significant. Both injection of permanganate and oxidation of TCE cause increases in bulk conductivity that would be detectable through time-lapse resistivity surveys in field conditions. Copyright © 2014 Elsevier B.V. All rights reserved.

Use of small scale electrical resistivity tomography to identify soil-root interactions during deficit irrigation

NASA Astrophysics Data System (ADS)

Vanella, D.; Cassiani, G.; Busato, L.; Boaga, J.; Barbagallo, S.; Binley, A.; Consoli, S.

2018-01-01

Plant roots activity affect the exchanges of mass and energy between the soil and atmosphere. However, it is challenging to monitor the activity of the root-zone because roots are not visible from the soil surface, and root systems undergo spatial and temporal variations in response to internal and external conditions. Therefore, measurements of the activity of root systems are interesting to ecohydrologists in general, and are especially important for specific applications, such as irrigation water management. This study demonstrates the use of small scale three-dimensional (3-D) electrical resistivity tomography (ERT) to monitor the root-zone of orange trees irrigated by two different regimes: (i) full rate, in which 100% of the crop evapotranspiration (ETc) is provided; and (ii) partial root-zone drying (PRD), in which 50% of ETc is supplied to alternate sides of the tree. We performed time-lapse 3-D ERT measurements on these trees from 5 June to 24 September 2015, and compared the long-term and short-term changes before, during, and after irrigation events. Given the small changes in soil temperature and pore water electrical conductivity, we interpreted changes of soil electrical resistivity from 3-D ERT data as proxies for changes in soil water content. The ERT results are consistent with measurements of transpiration flux and soil temperature. The changes in electrical resistivity obtained from ERT measurements in this case study indicate that root water uptake (RWU) processes occur at the 0.1 m scale, and highlight the impact of different irrigation schemes.

Combined time-lapse cinematography and immuno-electron microscopy.

PubMed

Balfour, B M; Goscicka, T; MacKenzie, J L; Gautam, A; Tate, M; Clark, J

1990-04-01

A method was developed to record interactions between mobile non-adherent immunocytes by time-lapse cinematography and then to study the same cells by immuno-electron microscopy, using monoclonal antibodies against surface components. For this purpose a modified stage was designed to fit an inverted microscope. The attachment included a device to cool the culture chamber with N2 gas, a micro-injector for monoclonal antibody and immuno-gold treatment, and two pairs of washing needles to change the medium without disturbance. The technique was first employed to study the formation of aggregates around the antigen-presenting cells in cultures containing cells from hyper-immunized animals. Recently peripheral blood cells from normal subjects and patients with immune deficiency syndromes were stimulated with pokeweed mitogen, cluster formation was recorded, and the cells were processed for immuno-electron microscopy.

Spray Irrigation Effects on Surface-Layer Stability in an Experimental Citrus Orchard during Winter Freezes.

NASA Astrophysics Data System (ADS)

Cooper, Harry J.; Smith, Eric A.; Martsolf, J. David

1997-02-01

Observations taken by two surface radiation and energy budget stations deployed in the University of Florida/Institute for Food and Agricultural Service experimental citrus orchard in Gainesville, Florida, have been analyzed to identify the effects of sprayer irrigation on thermal stability and circulation processes within the orchard during three 1992 winter freeze episodes. Lapse rates of temperature observed from a micrometeorological tower near the center of the orchard were also recorded during periods of irrigation for incorporation into the analysis. Comparisons of the near-surface temperature lapse rates observed with the two energy budget stations show consistency between the two sites and with the tower-based lapse rates taken over a vertical layer from 1.5 to 15 m above ground level. A theoretical framework was developed that demonstrates that turbulent-scale processes originating within the canopy, driven by latent heat release associated with condensation and freezing processes from water vapor and liquid water released from sprayer nozzles, can destabilize lapse rates and promote warm air mixing above the orchard canopy. The orchard data were then analyzed in the context of the theory for evidence of local overturning and displacement of surface-layer air, with warmer air from aloft driven by locally buoyant plumes generated by water vapor injected into the orchard during the irrigation periods. It was found that surface-layer lapse rates were lower during irrigation periods than under similar conditions when irrigation was not occurring, indicating a greater degree of vertical mixing of surface-layer air with air from above treetops, as a result of local convective overturning induced by the condensation heating of water vapor released at the nozzles of the sprinklers. This provides an additional explanation to the well-accepted heat of fusion release effect, of how undertree irrigation of a citrus orchard during a freeze period helps protect crops against frost damage.

Stunning Aurora Borealis from Space - Ultra-High Definition 4K

NASA Image and Video Library

2016-04-17

NASA Television’s newest offering, NASA TV UHD, brings ultra-high definition video to a new level with the kind of imagery only the world’s leader in space exploration could provide. Harmonic produced this show exclusively for NASA TV UHD, using time-lapses shot from the International Space Station, showing both the Aurora Borealis and Aurora Australis phenomena that occur when electrically charged electrons and protons in the Earth's magnetic field collide with neutral atoms in the upper atmosphere.

A multidisciplinary investigation of groundwater fluctuations and their control on river chemistry - Insights from time-lapse active seismic experiments during flood events

NASA Astrophysics Data System (ADS)

Dangeard, M.; Bodet, L.; Kuessner, M.; Bouchez, J.; Thiesson, J.; Lucas, A.; Gayer, E.; Frick, D. A.

2017-12-01

With seismic methods, the indirect estimation of VP/VS or Poisson's ratio classically permit imaging fluids in rocks. But this strategy remains underused in near-surface applications, hence in hydrogeophysics. Yet, the combined use of P-wave traveltime data and surface-wave dispersion analysis recently proved to be efficient in the characterization of the Critical Zone (CZ) and in the study of various hydrosystems. We now suggest a time-lapse application of this approach in order to help the understanding of the vadose zone/aquifer continuum processes. Seismic experiments were performed on the granitic Sapine catchment (southeastern edge of the Massif Central - France) at different space (along the slope and at the stream-aquifer interface) and time (high-low water cycle and during storm/flood events) scales. Spatial and temporal variations of seismic data were clearly observed and indicated marked changes of the mechanical properties in the CZ. We were able, to not only image the thickness of the weathered layer, but also to discriminate several preferential infiltration and saturation areas, to be linked with hydrological and geochemical data and models.

Joint inversion of time-lapse VSP data for monitoring CO2 injection at the Farnsworth EOR field in Texas

NASA Astrophysics Data System (ADS)

Zhang, M.; Gao, K.; Balch, R. S.; Huang, L.

2016-12-01

During the Development Phase (Phase III) of the U.S. Southwest Regional Partnership on Carbon Sequestration (SWP), time-lapse 3D vertical seismic profiling (VSP) data were acquired to monitor CO2 injection/migration at the Farnsworth Enhanced Oil Recovery (EOR) field, in partnership with the industrial partner Chaparral Energy. The project is to inject a million tons of carbon dioxide into the target formation, the deep oil-bearing Morrow Formation in the Farnsworth Unit EOR field. Quantitative time-lapse seismic monitoring has the potential to track CO2 movement in geologic carbon storage sites. Los Alamos National Laboratory (LANL) has recently developed new full-waveform inversion methods to jointly invert time-lapse seismic data for changes in elastic and anisotropic parameters in target monitoring regions such as a CO2 reservoir. We apply our new joint inversion methods to time-lapse VSP data acquired at the Farnsworth EOR filed, and present some preliminary results showing geophysical properties changes in the reservoir.

4-D imaging of seepage in earthen embankments with time-lapse inversion of self-potential data constrained by acoustic emissions localization

NASA Astrophysics Data System (ADS)

Rittgers, J. B.; Revil, A.; Planes, T.; Mooney, M. A.; Koelewijn, A. R.

2015-02-01

New methods are required to combine the information contained in the passive electrical and seismic signals to detect, localize and monitor hydromechanical disturbances in porous media. We propose a field experiment showing how passive seismic and electrical data can be combined together to detect a preferential flow path associated with internal erosion in a Earth dam. Continuous passive seismic and electrical (self-potential) monitoring data were recorded during a 7-d full-scale levee (earthen embankment) failure test, conducted in Booneschans, Netherlands in 2012. Spatially coherent acoustic emissions events and the development of a self-potential anomaly, associated with induced concentrated seepage and internal erosion phenomena, were identified and imaged near the downstream toe of the embankment, in an area that subsequently developed a series of concentrated water flows and sand boils, and where liquefaction of the embankment toe eventually developed. We present a new 4-D grid-search algorithm for acoustic emissions localization in both time and space, and the application of the localization results to add spatially varying constraints to time-lapse 3-D modelling of self-potential data in the terms of source current localization. Seismic signal localization results are utilized to build a set of time-invariant yet spatially varying model weights used for the inversion of the self-potential data. Results from the combination of these two passive techniques show results that are more consistent in terms of focused ground water flow with respect to visual observation on the embankment. This approach to geophysical monitoring of earthen embankments provides an improved approach for early detection and imaging of the development of embankment defects associated with concentrated seepage and internal erosion phenomena. The same approach can be used to detect various types of hydromechanical disturbances at larger scales.

Source Repeatability of Time-Lapse Offset VSP Surveys for Monitoring CO2 Injection

NASA Astrophysics Data System (ADS)

Zhang, Z.; Huang, L.; Rutledge, J. T.; Denli, H.; Zhang, H.; McPherson, B. J.; Grigg, R.

2009-12-01

Time-lapse vertical seismic profiling (VSP) surveys have the potential to remotely track the migration of injected CO2 within a geologic formation. To accurately detect small changes due to CO2 injection, the sources of time-lapse VSP surveys must be located exactly at the same positions. However, in practice, the source locations can vary from one survey to another survey. Our numerical simulations demonstrate that a variation of a few meters in the VSP source locations can result in significant changes in time-lapse seismograms. To address the source repeatability issue, we apply double-difference tomography to downgoing waves of time-lapse offset VSP data to invert for the source locations and the velocity structures simultaneously. In collaboration with Resolute Natural Resources, Navajo National Oil and Gas Company, and the Southwest Regional Partnership on Carbon Sequestration under the support of the U.S. Department of Energy’s National Energy Technology Laboratory, one baseline and two repeat offset VSP datasets were acquired in 2007-2009 for monitoring CO2 injection at the Aneth oil field in Utah. A cemented geophone string was used to acquire the data for one zero-offset and seven offset source locations. During the data acquisition, there was some uncertainty in the repeatability of the source locations relative to the baseline survey. Our double-difference tomography results of the Aneth time-lapse VSP data show that the source locations for different surveys are separated up to a few meters. Accounting for these source location variations during VSP data analysis will improve reliability of time-lapse VSP monitoring.

Application of time-lapse ERT to characterize soil-water-disease interactions of young citrus trees

NASA Astrophysics Data System (ADS)

Peddinti, S. R.; Kbvn, D. P.; Ranjan, S.; R M, P. G.

2016-12-01

Vidarbha region in Maharashtra, India is witnessing a continuous decrease in orange crop due to the propagation of `Phytopthora root rot', a water mold disease. Under favorable conditions, the disease causing bacteria can attack the plant root system and propagates to the surface (where first visual impression is made), making difficult to regain the plant health. This research aims at co-relating eco-hydrological fluxes with disease sensing parameters of orange trees. Two experimental plots around a healthy-young and declined-young orange trees were selected for our analysis. A 3-dimentional electrical resistivity tomography (ERT) (Figure) was carried at each plot to quantify the soil moisture distribution at a vadose zone. Pedo-electric relations were obtained considering modified Archie's law parameters. ERT derived moisture data was validated with time domain reflectometry (TDR) point observations. Soil moisture profiles derived from ERT were observed to be differ marginally between the two plots. Disease quantification was done by estimating the density of Phytopthora spp. inoculum in soils sampled along the root zone. Identification of Phytopthora spp. was done in the laboratory using taxonomic and morphologic criteria of the colonies. Spatio-temporal profiles of soil moisture and inoculum density were then co-related to comment on the eco-hydrological fluxes contributing to the health propagation of root rot in orange tree for implementing effective water management practices.

Composite time-lapse computed tomography and micro finite element simulations: A new imaging approach for characterizing cement flows and mechanical benefits of vertebroplasty.

PubMed

Stadelmann, Vincent A; Zderic, Ivan; Baur, Annick; Unholz, Cynthia; Eberli, Ursula; Gueorguiev, Boyko

2016-02-01

Vertebroplasty has been shown to reinforce weak vertebral bodies and reduce fracture risks, yet cement leakage is a major problem that can cause severe complications. Since cement flow is nearly impossible to control during surgery, small volumes of cement are injected, but then mechanical benefits might be limited. A better understanding of cement flows within bone structure is required to further optimize vertebroplasty and bone augmentation in general. We developed a novel imaging method, composite time-lapse CT, to characterize cement flow during injection. In brief, composite-resolution time-lapse CT exploits the qualities of microCT and clinical CT. The method consists in overlaying low-resolution time-lapse CT scans acquired during injection onto pre-operative high-resolution microCT scans, generating composite-resolution time-lapse CT series of cement flow within bone. In this in vitro study, composite-resolution time-lapse CT was applied to eight intact and five artificially fractured cadaveric vertebrae during vertebroplasty. The time-lapse scans were acquired at one-milliliter cement injection steps until a total of 10 ml cement was injected. The composite-resolution series were then converted into micro finite element models to compute strains distribution under virtual axial loading. Relocation of strain energy density within bone structure was observed throughout the progression of the procedure. Interestingly, the normalized effect of cement injection on the overall stiffness of the vertebrae was similar between intact and fractured specimens, although at different orders of magnitude. In conclusion, composite time-lapse CT can picture cement flows during bone augmentation. The composite images can also be easily converted into finite element models to compute virtual strain distributions under loading at every step of an injection, providing deeper understanding on the biomechanics of vertebroplasty. Copyright © 2015 IPEM. Published by Elsevier Ltd. All rights reserved.

Analysis of Snow Line and Albedo Conditions By Means of Time-Lapse Photography on Tapado Glacier, Chile

NASA Astrophysics Data System (ADS)

Vivero, S.; MacDonell, S.; McPhee, J. P.

2014-12-01

In the semiarid Coquimbo Region of Chile, high-altitude glaciers and seasonal snow are important sources of freshwater for irrigated agriculture and urban consumption. Due to the aridity of the environment, losses due to sublimation are large which means that accurate melt modelling is essential in order to reliably estimate streamflow. Since 2008, the CEAZA glaciology group has been studying the energy and mass balance of the largest glacier in the catchment, the Tapado Glacier using field and remote sensing measurements, and numerical modelling. The Tapado glacier system (30°08' S, 69°55' W) is a complex assemblage of uncovered and debris-covered ice located at the head of the Elqui basin between 4500 and 5536 m a.s.l. Energy balance modelling studies at the site have been limited in scope due to the development of ice pinnacles or penitentes on snow and ice surfaces. These features complicate energy distribution across the surface, due to modifications of parameters such as albedo. In this paper, we use time-lapse photography and automatic weather station (AWS) measurements to investigate how the development of penitentes impacts the spatial and temporal variability of albedo across the glacier surface and whether terrestrial photography is appropriate for use at such locations. Oblique photographs obtained from a high vantage point were georeferenced using a high resolution digital elevation model available for the entire glacier and its environs. By comparing the photographic data with point albedo measurements made at an AWS, distributed albedo maps were produced. Preliminary results suggest that distributed albedo values may be underestimated by the formation and development of penitentes during the ablation season. Moreover, it was observed that the evolution of the snow line during summer was not only topographically controlled but also modified by occasional convective snowfalls. Time-lapse photography provided to be a cost-effective tool for monitoring remote and high-altitude glaciers at high temporal resolution.

Time-lapse Mise-á-la-Masse measurements and modeling for tracer test monitoring in a shallow aquifer

NASA Astrophysics Data System (ADS)

Perri, Maria Teresa; De Vita, Pantaleone; Masciale, Rita; Portoghese, Ivan; Chirico, Giovanni Battista; Cassiani, Giorgio

2018-06-01

The main goal of this study is to evaluate the reliability of the Mise-á-la-Masse (MALM) technique associated with saline tracer tests for the characterization of groundwater flow direction and velocity. The experimental site is located in the upper part of the Alento River alluvial plain (Campania Region, Southern Italy). In this paper we present the hydrogeological setting, the experimental setup and the relevant field results. Subsequently, we compare those data against the simulated results obtained with a 3D resistivity model of the test area, coupled with a model describing the Advection - Dispersion equation for continuous tracer injection. In particular, we calculate a series of 3D forward solutions starting from a reference model, all derived from electrical tomography results, but taking into consideration different values of mean flow velocity and directions. Each electrical resistivity 3D model is used to produce synthetic voltage maps for MALM surveys. Finally, the synthetic MALM voltage maps are compared with the ones measured in the field in order to assess the information content of the MALM dataset with respect to the groundwater field characteristics. The results demonstrate that the information content of the MALM data is sufficient to define important characteristics of the aquifer geometry and properties. This work shows how a combination of three-dimensional time-lapse modeling of flow, tracer transport and electrical current can substantially contribute towards a quantitative interpretation of MALM measurements during a saline tracer test. This approach can thus revive the use of MALM as a practical, low cost field technique for tracer test monitoring and aquifer hydrodynamic characterization.

Relations among affect, abstinence motivation and confidence, and daily smoking lapse risk.

PubMed

Minami, Haruka; Yeh, Vivian M; Bold, Krysten W; Chapman, Gretchen B; McCarthy, Danielle E

2014-06-01

This study tested the hypothesis that changes in momentary affect, abstinence motivation, and confidence would predict lapse risk over the next 12-24 hr using Ecological Momentary Assessment (EMA) data from smokers attempting to quit smoking. One hundred and three adult, daily, treatment-seeking smokers recorded their momentary affect, motivation to quit, abstinence confidence, and smoking behaviors in near real time with multiple EMA reports per day using electronic diaries postquit. Multilevel models indicated that initial levels of negative affect were associated with smoking, even after controlling for earlier smoking status, and that short-term increases in negative affect predicted lapses up to 12, but not 24, hr later. Positive affect had significant effects on subsequent abstinence confidence, but not motivation to quit. High levels of motivation appeared to reduce increases in lapse risk that occur over hours although momentary changes in confidence did not predict lapse risk over 12 hr. Negative affect had short-lived effects on lapse risk, whereas higher levels of motivation protected against the risk of lapsing that accumulates over hours. An increase in positive affect was associated with greater confidence to quit, but such changes in confidence did not reduce short-term lapse risk, contrary to expectations. Relations observed among affect, cognitions, and lapse seem to depend critically on the timing of assessments.

Time-lapse gravity and levelling in the sinkhole-endangered urban area of Bad Frankenhausen, Germany

NASA Astrophysics Data System (ADS)

Kobe, Martin; Gabriel, Gerald; Weise, Adelheid; Krawczyk, Charlotte; Vogel, Detlef

2017-04-01

Sinkholes, resulting from subrosion in the subsurface, can reach diameters of several hundred meters and thus pose a severe hazard for infrastructure and inhabitants in urban areas. Subrosion is the leaching of readily-soluble rocks, such as rock salt, gypsum, anhydrite and limestone by ground or meteoric water and leads to mass transport and relocation. Two scenarios of sinkhole evolution are conceivable: First, the surface subsides continuously in order to compensate for the mass loss. Second, the mass relocation leads to development of subsurface cavities. If they reach a critical size and the cover layers are not supported anymore, the surface collapses abruptly. To improve the understanding of subrosion processes and the related surface deformation a case study is conducted in Bad Frankenhausen, Germany, where subrosion leaches the Zechstein evaporates of the Permian. One part of the study is to analyse the spatiotemporal development of sinkholes by applying time-lapse observations. Therefore, we established a monitoring network consisting of 15 gravity and additional levelling points covering the main sinkhole areas in the city centre. In March 2014, the baseline survey was carried out. Since then, quarterly measurement campaigns are performed. In each campaign four different gravity meters are used to collect a statistical significant amount of data and to control the plausibility of our data. The gravity measurements are complemented by levelling surveys. The rectification of the time-lapse gravity data comprises the correction for jumps and systematic errors, as well as for well calculable influences, such as earth tides and air pressure changes. Furthermore, special interest was applied to seasonal changes of hydrological parameters such as soil moisture or groundwater level. We found the hydrological influence to be in the single digit up to the lower two-digit µGal range, depending on the season and the station. The standard deviations of the adjusted gravity differences are in the range of 2-7 µGal, depending on the gravity meter, and this leads to a significance of the correction for hydrological influences. Another challenge comes from anthropogenic activities. For example, the influence of urban development near one of our gravity stations provides ca. 10 µGal. The gravity acceleration changes in the range of 0 to 15 µGal over a timespan of three years. A subsidence of 0 to 15 mm is found from levelling at the gravity stations in the sinkhole-related areas of Bad Frankenhausen, mainly around the leaning spire. We show the feasibility of the time-lapse gravity method by observing the mass loss in subrosion-dominated areas. Gravity measurements in addition to levelling may be useful to improve the knowledge about local surface deformation. Both methods could be part of an early recognition system for sinkholes.

Improving time-lapse seismic repeatability: CO2CRC Otway site permanent geophone array field trials

NASA Astrophysics Data System (ADS)

Pevzner, Roman; Dupuis, Christian; Shulakova, Valeriya; Urosevic, Milovan; Lumley, David

2013-04-01

The proposed Stage 2C of the CO2CRC Otway project involves injection of a small amount (around 15,000 tonnes) of CO2/CH4 gas mixture into saline acquifer (Paaratte formation) at the depth of ~1.5 km. The seismic time-lapse signal will depend largely on the formation properties and the injection scenario, but is likely to be relatively weak. In order to improve time-lapse seismic monitoring capabilities by decreasing the noise level, a buried receiver arrays can be used. A small-scale trial of such an array was conducted at Otway site in June 2012. A set of 25 geophones was installed in 3 m deep boreholes in parallel to the same number of surface geophones. In addition, four geophones were placed into boreholes of 1 to 12 m depth. In order to assess the gain in the signal-to-noise ratio and repeatability, both active and passive seismic surveys were carried out. The surveys were conducted in relatively poor weather conditions, with rain, strong wind and thunderstorms increasing the noise level. We found that noise level for buried geophones is on average 20 dB lower compared to the surface ones. Furthermore, the combination of active and passive experiments has allowed us to perform a detailed classification of various noise sources. Acknowledgement The authors acknowledge the funding provided by the Australian government through its CRC program to support this CO2CRC research project. We also acknowledge the CO2CRC's corporate sponsors and the financial assistance provided through Australian National Low Emissions Coal Research and Development (ANLEC R&D). ANLEC R&D is supported by Australian Coal Association Low Emissions Technology Limited and the Australian Government through the Clean Energy Initiative.

Modeling of time-lapse multi-scale seismic monitoring of CO2 injected into a fault zone to enhance the characterization of permeability in enhanced geothermal systems

NASA Astrophysics Data System (ADS)

Zhang, R.; Borgia, A.; Daley, T. M.; Oldenburg, C. M.; Jung, Y.; Lee, K. J.; Doughty, C.; Altundas, B.; Chugunov, N.; Ramakrishnan, T. S.

2017-12-01

Subsurface permeable faults and fracture networks play a critical role for enhanced geothermal systems (EGS) by providing conduits for fluid flow. Characterization of the permeable flow paths before and after stimulation is necessary to evaluate and optimize energy extraction. To provide insight into the feasibility of using CO2 as a contrast agent to enhance fault characterization by seismic methods, we model seismic monitoring of supercritical CO2 (scCO2) injected into a fault. During the CO2 injection, the original brine is replaced by scCO2, which leads to variations in geophysical properties of the formation. To explore the technical feasibility of the approach, we present modeling results for different time-lapse seismic methods including surface seismic, vertical seismic profiling (VSP), and a cross-well survey. We simulate the injection and production of CO2 into a normal fault in a system based on the Brady's geothermal field and model pressure and saturation variations in the fault zone using TOUGH2-ECO2N. The simulation results provide changing fluid properties during the injection, such as saturation and salinity changes, which allow us to estimate corresponding changes in seismic properties of the fault and the formation. We model the response of the system to active seismic monitoring in time-lapse mode using an anisotropic finite difference method with modifications for fracture compliance. Results to date show that even narrow fault and fracture zones filled with CO2 can be better detected using the VSP and cross-well survey geometry, while it would be difficult to image the CO2 plume by using surface seismic methods.

Geoelectrical Tomography for landslide monitoring: state-of-the-art and future challenges.

NASA Astrophysics Data System (ADS)

Lapenna, V.; Perrone, A.; Piscitelli, S.

2011-12-01

Recently, novel algorithms for tomographic data inversion, robust models for describing the hydrogeophysical processes and new sensor networks for the field data acquisition have rapidly transformed the geoelectrical methods in a powerful and cost-effective tool for geo-hazard monitoring. These technological and methodological improvements disclose the way for a wide spectra of interesting and challenging applications in geo-hazards monitoring: reconstruction of landslide geometry; identification of fluid and gas uprising in volcanic areas; electrical imaging of seismic faults etc.. We briefly resume the current state-of-the-art of the geoelectrical methods in landslide monitoring and introduce new and emerging applications of the geoelectrical tomographic methods. An overview of the more interesting results obtained in different areas of Italian territory affected by wide and diffuse hydrogeological instability phenomena will be presented and discussed. We will focus the attention to some recent results obtained in the frame of national and international projects (Morfeo, Eurorisk/Preview, DORIS). One of the key challenges for the future will be the integration of active (Resistivity) and passive (Self-Potential) measurements for obtaining 2D, 3D and 4D (time-lapse) electrical tomographies able to follow the spatial and temporal dynamics of electrical parameters (i.e. resistivity, self-potential) inside the landslide body. The resistivity imaging can be applied for illuminating the sliding surfaces and for mapping the time-dependent changes of water content in vadose zones, while the Self Potential imaging could give a significant contribute for delineating the groundwater circulation patterns and to the early identification of triggering factors.

Enhanced monitoring of hazardous waste site remediation: Electrical conductivity tomography and citizen monitoring of remediation through the EPA's community advisory group program

NASA Astrophysics Data System (ADS)

Hort, Ryan D.

In situ chemical oxidation using permanganate has become a common method for degrading trichloroethene (TCE) in contaminated aquifers. Its effectiveness, however, is dependent upon contact between the oxidant and contaminant. Monitoring permanganate movement after injection is often hampered by aquifer heterogeneity and insufficient well coverage. Time lapse electrical conductivity tomography increases the spatial extent of monitoring beyond well locations. This technique can create two- or three-dimensional images of the electrical conductivity within the aquifer to monitor aquifer chemistry changes caused by permanganate injection and oxidation reactions. In-phase and quadrature electrical conductivity were measured in homogeneous aqueous and porous media samples to determine the effects of TCE and humate oxidation by permanganate on both measures of conductivity. Further effects of clean sand, 10% kaolinite (v/v), and 10% smectite (v/v) on both types of conductivity were studied as well. Finally, in-phase electrical conductivity was measured over time after injecting permanganate solution into two-dimensional tanks containing artificial groundwater with and without TCE to observe the movement of the permanganate plume and its interaction with TCE and to examine the effectiveness of time-lapse conductivity tomography for monitoring the plume's movement. In-phase electrical conductivity after oxidation reactions involving permanganate, TCE, and humate could be accurately modeled in homogeneous batch samples. Use of forward modeling of in-phase conductivity from permanganate concentrations may be useful for improving recovery of conductivity values during survey inversion, but further work is needed combining the chemistry modeling with solute transport models. Small pH-related quadrature conductivity decreases were observed after TCE oxidation, and large quadrature conductivity increases were observed as a result of sodium ion addition; however, quadrature conductivity could not be related to concentrations of permanganate or reaction products. Additionally, EPA Superfund sites participating in the Community Advisory Group (CAG) program were examined to determine how communities may have benefitted from the program. While CAG participation was correlated with slower achievement of EPA cleanup milestones, many CAGs successfully achieved five standardized social goals. CAGs that achieved these social goals varied in composition but were similar in their focus on community outreach and ability to extend their influence beyond CAG meetings.

Multiview robotic microscope reveals the in-plane kinematics of amphibian neurulation.

PubMed

Veldhuis, Jim H; Brodland, G Wayne; Wiebe, Colin J; Bootsma, Gregory J

2005-06-01

A new robotic microscope system, called the Frogatron 3000, was developed to collect time-lapse images from arbitrary viewing angles over the surface of live embryos. Embryos are mounted at the center of a horizontal, fluid-filled, cylindrical glass chamber around which a camera with special optics traverses. To hold them at the center of the chamber and revolve them about a vertical axis, the embryos are placed on the end of a small vertical glass tube that is rotated under computer control. To demonstrate operation of the system, it was used to capture time-lapse images of developing axolotl (amphibian) embryos from 63 viewing angles during the process of neurulation and the in-plane kinematics of the epithelia visible at the center of each view was calculated. The motions of points on the surface of the embryo were determined by digital tracking of their natural surface texture, and a least-squares algorithm was developed to calculate the deformation-rate tensor from the motions of these surface points. Principal strain rates and directions were extracted from this tensor using decomposition and eigenvector techniques. The highest observed principal true strain rate was 28 +/- 5% per hour, along the midline of the neural plate during developmental stage 14, while the greatest contractile true strain rate was--35 +/- 5% per hour, normal to the embryo midline during stage 15.

Long-term observations of bottom conditions and sediment movement on the Atlantic continental shelf; time-lapse photography from instrumented tripod

USGS Publications Warehouse

Butman, Bradford; Bryden, Cynthia G.; Pfirman, Stephanie L.; Strahle, William J.; Noble, Marlene A.

1984-01-01

An instrument system that measures bottom current, temperature, light transmission, and pressure, and that photographs the bottom at 2- to 6-hour intervals has been developed to study sediment transport on the Atlantic Continental Shelf. Instruments have been deployed extensively along the United States East Coast Continental Shelf for periods of from 2 to 6 months to study the frequency, direction, and rate of bottom sediment movement, and the processes causing movement. The time-lapse photographs are used to (1) characterize the bottom benthic community and surface microtopography; (2) monitor changes in the bottom topography and near-bottom water column caused by currents and storms (for example, ripple generation and migration, sediment resuspension); and (3) monitor seasonal changes in the bottom benthic community and qualitative effects of this community on the bottom sediments.

Time-lapse monitoring of zona pellucida-free embryos obtained through in vitro fertilization: a retrospective case series.

PubMed

Bodri, Daniel; Kato, Ryutaro; Kondo, Masae; Hosomi, Naoko; Katsumata, Yoshinari; Kawachiya, Satoshi; Matsumoto, Tsunekazu

2015-05-01

To report time-lapse monitoring of human oocytes in which the damaged zona pellucida was removed, producing zona-free (ZF) oocytes that were cultured until the blastocyst stage in time-lapse incubators. Retrospective case series. Private infertility clinic. Infertile patients (n = 32) undergoing minimal ovarian stimulation or natural cycle IVF treatment between October 2012 and June 2014. Intracytoplasmic sperm injection (ICSI) fertilization of ZF oocytes, prolonged embryo culture in time-lapse incubators, elective vitrification, and subsequent single vitrified-thawed blastocyst transfer (SVBT). Rate of fertilization, cleavage and blastocyst development, live-birth rate per SVBT cycle. In spite of advanced maternal age (39 ± 4.2; range, 30-46 years), good fertilization (94%), cleavage (94%), and blastocyst development rates (38%) were reached after fertilization and culturing of ZF oocytes/embryos. All thawed ZF blastocysts survived, and up to this date seven SVBT transfers were performed, yielding three (43%) term live births with healthy newborns. Time-lapse imagery gives a unique insight into the dynamics of embryo development in ZF embryos. Moreover, our case series demonstrate that an oocyte with a damaged zona pellucida that has been removed could be successfully fertilized with ICSI, cultured until blastocyst stage in a time-lapse incubator and vitrified electively for subsequent use. Copyright © 2015 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

Relationship between electrical conductivity anisotropy and fabric anisotropy in granular materials during drained triaxial compressive tests: a numerical approach

NASA Astrophysics Data System (ADS)

Niu, Qifei; Revil, André; Li, Zhaofeng; Wang, Yu-Hsing

2017-07-01

The anisotropy of granular media and its evolution during shearing are important aspects required in developing physics-based constitutive models in Earth sciences. The development of relationships between geoelectrical properties and the deformation of porous media has applications to the monitoring of faulting and landslides. However, such relationships are still poorly understood. In this study, we first investigate the definition of the electrical conductivity anisotropy tensor of granular materials in presence of surface conductivity of the grains. Fabric anisotropy is related to the components of the fabric tensor. We define an electrical anisotropy factor based on the Archie's exponent second-order symmetric tensor m of granular materials. We use numerical simulations to confirm a relationship between the evolution of electrical and fabric anisotropy factors during shearing. To realize the simulations, we build a virtual laboratory in which we can easily perform synthetic experiments. We first simulate drained compressive triaxial tests of loose and dense granular materials (porosity 0.45 and 0.38, respectively) using the discrete element method. Then, the electrical conductivity tensor of a set of deformed synthetic samples is computed using the finite-difference method. The numerical results show that shear strains are responsible for a measurable anisotropy in the bulk conductivity of granular media. The observed electrical anisotropy response, during shearing, is distinct for dense and loose synthetic samples. Electrical and fabric anisotropy factors exhibit however a unique linear correlation, regardless of the shear strain and the initial state (porosity) of the synthetic samples. The practical implication of this finding confirms the usefulness of the electrical conductivity method in studying the fabric tensor of granular media. This result opens the door in using time-lapse electrical resistivity to study non-intrusively the evolution of anisotropy of soils and granular rocks during deformation, for instance during landslides, and to use the evolution of the conductivity tensor to monitor mechanical properties.

Optimization of a Time-Lapse Gravity Network for Carbon Sequestration

NASA Astrophysics Data System (ADS)

Appriou, D.; Strickland, C. E.; Ruprecht Yonkofski, C. M.

2017-12-01

The objective of this study is to evaluate what could be a comprehensive and optimal state of the art gravity monitoring network that would meet the UIC class VI regulation and insure that 90% of the CO2 injected remain underground. Time-lapse gravity surveys have a long history of effective applications of monitoring temporal density changes in the subsurface. For decades, gravity measurements have been used for a wide range of applications. The interest of time-lapse gravity surveys for monitoring carbon sequestration sites started recently. The success of their deployment in such sites depends upon a combination of favorable conditions, such as the reservoir geometry, depth, thickness, density change over time induced by the CO2 injection and the location of the instrument. In most cases, the density changes induced by the CO2 plume in the subsurface are not detectable from the surface but the use of borehole gravimeters can provide excellent results. In the framework of the National Assessment and Risk Partnership (NRAP) funded by the Department of Energy, the evaluation of the effectiveness of the gravity monitoring of a CO2 storage site has been assessed using multiple synthetic scenarios implemented on a community model developed for the Kimberlina site (e.g., fault leakage scenarios, borehole leakage). The Kimberlina carbon sequestration project was a pilot project located in southern San Joaquin Valley, California, aimed to safely inject 250,000 t CO2/yr for four years. Although the project was cancelled in 2012, the site characterization efforts resulted in the development of a geologic model. In this study, we present the results of the time-lapse gravity monitoring applied on different multiphase flow and reactive transport models developed by Lawrence Berkeley National Laboratory (i.e., no leakage, permeable fault zone, wellbore leakage). Our monitoring approach considers an ideal network, consisting of multiple vertical and horizontal instrumented boreholes that could be used to track the CO2 plume and potential leaks. A preliminary cost estimate will also be provided.

CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data.

PubMed

Bray, Mark-Anthony; Carpenter, Anne E

2015-11-04

Time-lapse analysis of cellular images is an important and growing need in biology. Algorithms for cell tracking are widely available; what researchers have been missing is a single open-source software package to visualize standard tracking output (from software like CellProfiler) in a way that allows convenient assessment of track quality, especially for researchers tuning tracking parameters for high-content time-lapse experiments. This makes quality assessment and algorithm adjustment a substantial challenge, particularly when dealing with hundreds of time-lapse movies collected in a high-throughput manner. We present CellProfiler Tracer, a free and open-source tool that complements the object tracking functionality of the CellProfiler biological image analysis package. Tracer allows multi-parametric morphological data to be visualized on object tracks, providing visualizations that have already been validated within the scientific community for time-lapse experiments, and combining them with simple graph-based measures for highlighting possible tracking artifacts. CellProfiler Tracer is a useful, free tool for inspection and quality control of object tracking data, available from http://www.cellprofiler.org/tracer/.

Relations among Affect, Abstinence Motivation and Confidence, and Daily Smoking Lapse Risk

PubMed Central

Minami, Haruka; Yeh, Vivian M.; Bold, Krysten W.; Chapman, Gretchen B.; McCarthy, Danielle E.

2016-01-01

Aims This study tested the hypothesis that changes in momentary affect, abstinence motivation, and confidence would predict lapse risk over the next 12–24 hours using Ecological Momentary Assessment (EMA) data from smokers attempting to quit smoking. Method 103 adult, daily, treatment-seeking smokers recorded their momentary affect, motivation to quit, abstinence confidence, and smoking behaviors in near real time with multiple EMA reports per day using electronic diaries post-quit. Results Multilevel models indicated that initial levels of negative affect were associated with smoking, even after controlling for earlier smoking status, and that short-term increases in negative affect predicted lapses up to 12, but not 24, hours later. Positive affect had significant effects on subsequent abstinence confidence, but not motivation to quit. High levels of motivation appeared to reduce increases in lapse risk that occur over hours while momentary changes in confidence did not predict lapse risk over 12 hours. Conclusion Negative affect had short-lived effects on lapse risk, whereas higher levels of motivation protected against the risk of lapsing that accumulates over hours. An increase in positive affect was associated with greater confidence to quit, but such changes in confidence did not reduce short-term lapse risk, contrary to expectations. Relations observed among affect, cognitions, and lapse seem to depend critically on the timing of assessments. PMID:24955665

Return of the JITAI: Applying a Just-in-Time Adaptive Intervention Framework to the Development of m-Health Solutions for Addictive Behaviors

PubMed Central

Evans, Brittney C.; Flack, Daniel; Juarascio, Adrienne; Manasse, Stephanie; Zhang, Fengqing; Forman, Evan M.

2018-01-01

Purpose Lapses are strong indicators of later relapse among individuals with addictive disorders, and thus are an important intervention target. However, lapse behavior has proven resistant to change due to the complex interplay of lapse triggers that are present in everyday life. It could be possible to prevent lapses before they occur by using m-Health solutions to deliver interventions in real-time. Method Just-in-time adaptive intervention (JITAI) is an intervention design framework that could be delivered via mobile app to facilitate in-the-moment monitoring of triggers for lapsing, and deliver personalized coping strategies to the user to prevent lapses from occurring. An organized framework is key for successful development of a JITAI. Results Nahum-Shani and colleagues (2014) set forth six core elements of a JITAI and guidelines for designing each: distal outcomes, proximal outcomes, tailoring variables, decision points, decision rules, and intervention options. The primary aim of this paper is to illustrate the use of this framework as it pertains to developing a JITAI that targets lapse behavior among individuals following a weight control diet. Conclusion We will detail our approach to various decision points during the development phases, report on preliminary findings where applicable, identify problems that arose during development, and provide recommendations for researchers who are currently undertaking their own JITAI development efforts. Issues such as missing data, the rarity of lapses, advantages/disadvantages of machine learning, and user engagement are discussed. PMID:28083725

Return of the JITAI: Applying a Just-in-Time Adaptive Intervention Framework to the Development of m-Health Solutions for Addictive Behaviors.

PubMed

Goldstein, Stephanie P; Evans, Brittney C; Flack, Daniel; Juarascio, Adrienne; Manasse, Stephanie; Zhang, Fengqing; Forman, Evan M

2017-10-01

Lapses are strong indicators of later relapse among individuals with addictive disorders, and thus are an important intervention target. However, lapse behavior has proven resistant to change due to the complex interplay of lapse triggers that are present in everyday life. It could be possible to prevent lapses before they occur by using m-Health solutions to deliver interventions in real-time. Just-in-time adaptive intervention (JITAI) is an intervention design framework that could be delivered via mobile app to facilitate in-the-moment monitoring of triggers for lapsing, and deliver personalized coping strategies to the user to prevent lapses from occurring. An organized framework is key for successful development of a JITAI. Nahum-Shani and colleagues (2014) set forth six core elements of a JITAI and guidelines for designing each: distal outcomes, proximal outcomes, tailoring variables, decision points, decision rules, and intervention options. The primary aim of this paper is to illustrate the use of this framework as it pertains to developing a JITAI that targets lapse behavior among individuals following a weight control diet. We will detail our approach to various decision points during the development phases, report on preliminary findings where applicable, identify problems that arose during development, and provide recommendations for researchers who are currently undertaking their own JITAI development efforts. Issues such as missing data, the rarity of lapses, advantages/disadvantages of machine learning, and user engagement are discussed.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e260338 - iss042e261334). Shows night time Earth views taken from the Cupola module.

Automatic segmentation of time-lapse microscopy images depicting a live Dharma embryo.

PubMed

Zacharia, Eleni; Bondesson, Maria; Riu, Anne; Ducharme, Nicole A; Gustafsson, Jan-Åke; Kakadiaris, Ioannis A

2011-01-01

Biological inferences about the toxicity of chemicals reached during experiments on the zebrafish Dharma embryo can be greatly affected by the analysis of the time-lapse microscopy images depicting the embryo. Among the stages of image analysis, automatic and accurate segmentation of the Dharma embryo is the most crucial and challenging. In this paper, an accurate and automatic segmentation approach for the segmentation of the Dharma embryo data obtained by fluorescent time-lapse microscopy is proposed. Experiments performed in four stacks of 3D images over time have shown promising results.

A time-series method for automated measurement of changes in mitotic and interphase duration from time-lapse movies.

PubMed

Sigoillot, Frederic D; Huckins, Jeremy F; Li, Fuhai; Zhou, Xiaobo; Wong, Stephen T C; King, Randall W

2011-01-01

Automated time-lapse microscopy can visualize proliferation of large numbers of individual cells, enabling accurate measurement of the frequency of cell division and the duration of interphase and mitosis. However, extraction of quantitative information by manual inspection of time-lapse movies is too time-consuming to be useful for analysis of large experiments. Here we present an automated time-series approach that can measure changes in the duration of mitosis and interphase in individual cells expressing fluorescent histone 2B. The approach requires analysis of only 2 features, nuclear area and average intensity. Compared to supervised learning approaches, this method reduces processing time and does not require generation of training data sets. We demonstrate that this method is as sensitive as manual analysis in identifying small changes in interphase or mitotic duration induced by drug or siRNA treatment. This approach should facilitate automated analysis of high-throughput time-lapse data sets to identify small molecules or gene products that influence timing of cell division.

Monitoring snowmelt and solute transport at Oslo airport by combining time-lapse electrical resistivity, soil water sampling and tensiometer measurements

NASA Astrophysics Data System (ADS)

Bloem, E.; French, H. K.

2013-12-01

Monitoring contaminant transport at contaminated sites requires optimization of the configuration of a limited number of samplings points combined with heterogeneous flow and preferential flowpaths. Especially monitoring processes in the unsaturated zone is a major challenge due to the limited volume monitored by for example suction cups and their risk to clog in a highly active degradation zone. To make progress on soil contamination assessment and site characterization there is a strong need to integrate field-sale extensively instrumented tools, with non-invasive (geophysical) methods which provide spatially integrated measurements also in the unsaturated zone. Examples of sites that might require monitoring activities in the unsaturated zone are airports with winter frost where large quantities of de-icing chemicals are used each winter; salt and contaminant infiltration along roads; constructed infiltration systems for treatment of sewerage or landfill seepage. Electrical resistivity methods have proved to be useful as an indirect measurement of subsurface properties and processes at the field-scale. The non-uniqueness of the interpretation techniques can be reduced by constraining the inversion through the addition of independent geophysical measurements along the same profile. Or interpretation and understanding of geophysical images can be improved by the combination with classical measurements of soil physical properties, soil suction, contaminant concentration and temperatures. In our experiment, at the research field station at Gardermoen, Oslo airport, we applied a degradable de-icing chemical and an inactive tracer to the snow cover prior to snowmelt. To study the solute transport processes in the unsaturated zone time-lapse cross borehole electrical resistivity tomography (ERT) measurements were conducted at the same time as soil water samples were extracted at multiple depths with suction cups. Measurements of soil temperature, and soil tension were also carried out during the monitoring period. We present a selection of results from the snowmelt experiments and how the combination of measurement techniques can help interpret and understand the relative importance of the various contributions to the bulk electrical conductivity during snowmelt and solute transport.

Air and wet bulb temperature lapse rates and their impact on snowmaking in a Pyrenean ski resort

NASA Astrophysics Data System (ADS)

López-Moreno, Juan Ignacio; Navarro-Serrano, F.; Azorín-Molina, C.; Sánchez-Navarrete, P.; Alonso-González, E.; Rico, I.; Morán-Tejeda, E.; Buisan, S.; Revuelto, J.; Pons, M.; Vicente-Serrano, S. M.

2018-03-01

A set of 17 air temperature and relative humidity sensors were used to analyze the temporal variability of surface air temperature (Tair), wet bulb temperature (Twb), and daily snowmaking hours (SM, number of hours per day with Twb < - 2 °C), lapse rates, and the occurrence of thermal inversions at the Formigal ski resort (Spanish Pyrenees) from December to March during three consecutive ski seasons (2012-2013, 2013-2014, and 2014-2015). The Tair and Twb lapse rates showed strong hourly and daily variability, with both exhibiting almost identical temporal fluctuations. The Twb exhibited average lapse rates that were slightly steeper (- 5.2 °C/km) than those observed for Tair (- 4.9 °C/km). The less steep lapse rates and most thermal inversions were observed in December. Days having less (more) steep Tair and Twb lapse rates were observed under low (high) wind speeds and high (low) relative humidity and air pressure. The temporal dynamics of the SM lapse rates was more complex, as this involved consideration of the average Tair in the ski resort, in addition to the driving factors of the spatio-temporal variability of Twb. Thus, on a number of cold (warm) days, snowmaking was feasible at all elevations at the ski resort, independently of the slopes of the lapse rates. The SM exhibited an average daily lapse rate of 8.2 h/km, with a progressive trend of increase from December to March. Weather types over the Iberian Peninsula tightly control the driving factors of the Tair, Twb, and SM lapse rates (wind speed, relative humidity, and Tair), so the slopes of the lapse rates and the frequency of inversions in relation to elevation for the three variables are very dependent on the occurrence of specific weather types. The less steep lapse rates occurred associated with advections from the southeast, although low lapse rates also occurred during advections from the east and south, and under anticyclonic conditions. The steepest Tair and Twb lapse rates were observed during north and northwest advections, while the steepest rates for SM were observed during days of cyclonic circulation and advections from the northeast.

Time-Lapse Acoustic Impedance Inversion in CO2 Sequestration Study (Weyburn Field, Canada)

NASA Astrophysics Data System (ADS)

Wang, Y.; Morozov, I. B.

2016-12-01

Acoustic-impedance (AI) pseudo-logs are useful for characterising subtle variations of fluid content during seismic monitoring of reservoirs undergoing enhanced oil recovery and/or geologic CO2 sequestration. However, highly accurate AI images are required for time-lapse analysis, which may be difficult to achieve with conventional inversion approaches. In this study, two enhancements of time-lapse AI analysis are proposed. First, a well-known uncertainty of AI inversion is caused by the lack of low-frequency signal in reflection seismic data. To resolve this difficulty, we utilize an integrated AI inversion approach combining seismic data, acoustic well logs and seismic-processing velocities. The use of well logs helps stabilizing the recursive AI inverse, and seismic-processing velocities are used to complement the low-frequency information in seismic records. To derive the low-frequency AI from seismic-processing velocity data, an empirical relation is determined by using the available acoustic logs. This method is simple and does not require subjective choices of parameters and regularization schemes as in the more sophisticated joint inversion methods. The second improvement to accurate time-lapse AI imaging consists in time-variant calibration of reflectivity. Calibration corrections consist of time shifts, amplitude corrections, spectral shaping and phase rotations. Following the calibration, average and differential reflection amplitudes are calculated, from which the average and differential AI are obtained. The approaches are applied to a time-lapse 3-D 3-C dataset from Weyburn CO2 sequestration project in southern Saskatchewan, Canada. High quality time-lapse AI volumes are obtained. Comparisons with traditional recursive and colored AI inversions (obtained without using seismic-processing velocities) show that the new method gives a better representation of spatial AI variations. Although only early stages of monitoring seismic data are available, time-lapse AI variations mapped within and near the reservoir zone suggest correlations with CO2 injection. By extending this procedure to elastic impedances, additional constraints on the variations of physical properties within the reservoir can be obtained.

Evaluation of High Density Surface Observations in Complex Terrain and Their Contribution to the MM5 Model

DTIC Science & Technology

2007-03-01

westerly surface winds, the existence of a dry-adiabatic lapse rate, and often the appearance of wave cloud features (Oard, 1993). For a long time...indicate that a large-scale mountain wave feature was present across almost the entire western United States. The GFS indicates this was a standing 31... wave and not a propagating feature since it persisted with very little movement from about 0600 UTC 6 Mar until about 0000 UTC 7 Mar. A cross

Livelihoods Poised Between Cold and Dry: Modeling Land Surface Phenologies and Phenometric Lapse Rates in Central Asian Highland Pastures

NASA Astrophysics Data System (ADS)

Henebry, G. M.; Tomaszewska, M. A.; Krehbiel, C. P.; Kelgenbaeva, K.

2016-12-01

To explore the vulnerability of high-elevation communities in the Kyrgyz Republic and in Uzbekistan to changing climatic, sociodemographic, and socioeconomic conditions, we assembled image time series to characterize the condition of pastures near villages at high elevation (>2000 masl) and in remote pastures at higher elevations. Here we describe the application of the convex quadratic (CxQ) model of land surface phenology to highland pasturelands for selected oblasts in the Kyrgyz Republic and in eastern Uzbekistan. We used 16 years (2000-2015) of Landsat normalized difference vegetation index (NDVI) data with MODIS land surface temperature data processed into accumulated growing degree-days. The peak height of the NDVI and the thermal time to peak are two key phenological metrics derived analytically from the fitted parameter coefficients of the CxQ model for each pixel time series. Both exhibited sensitivity to elevation, which we describe in terms of phenometric lapse rates (PLRs). Interannual variation in PLRs was expressed differently for the peak NDVI and the thermal time to peak. Peak NDVI increased with elevation up to a point but also exhibited more spatial variation in dry years than in wetter years. Thermal time to peak exhibited strong, highly significant negative linear relationships to elevation with steeper slopes in drier years. Both types of PLRs were modulated by aspect. These relationships and the associated CxQ models by elevation and aspect can provide expectations against which to detect changes in pasture status as a result of management or weather.

Four-dimensional ultrasound current source density imaging of a dipole field

NASA Astrophysics Data System (ADS)

Wang, Z. H.; Olafsson, R.; Ingram, P.; Li, Q.; Qin, Y.; Witte, R. S.

2011-09-01

Ultrasound current source density imaging (UCSDI) potentially transforms conventional electrical mapping of excitable organs, such as the brain and heart. For this study, we demonstrate volume imaging of a time-varying current field by scanning a focused ultrasound beam and detecting the acoustoelectric (AE) interaction signal. A pair of electrodes produced an alternating current distribution in a special imaging chamber filled with a 0.9% NaCl solution. A pulsed 1 MHz ultrasound beam was scanned near the source and sink, while the AE signal was detected on remote recording electrodes, resulting in time-lapsed volume movies of the alternating current distribution.

Time-lapse camera observations of gas piston activity at Pu`u `Ō`ō, Kīlauea volcano, Hawai`i

NASA Astrophysics Data System (ADS)

Orr, Tim R.; Rea, James C.

2012-12-01

Gas pistoning is a type of eruptive behavior described first at Kīlauea volcano and characterized by the (commonly) cyclic rise and fall of the lava surface within a volcanic vent or lava lake. Though recognized for decades, its cause continues to be debated, and determining why and when it occurs has important implications for understanding vesiculation and outgassing processes at basaltic volcanoes. Here, we describe gas piston activity that occurred at the Pu`u `Ō`ō cone, in Kīlauea's east rift zone, during June 2006. Direct, detailed measurements of lava level, made from time-lapse camera images captured at close range, show that the gas pistons during the study period lasted from 2 to 60 min, had volumes ranging from 14 to 104 m3, displayed a slowing rise rate of the lava surface, and had an average gas release duration of 49 s. Our data are inconsistent with gas pistoning models that invoke gas slug rise or a dynamic pressure balance but are compatible with models which appeal to gas accumulation and loss near the top of the lava column, possibly through the generation and collapse of a foam layer.

Investigating glide snow avalanche release using seismic monitoring in combination with time-lapse photography

NASA Astrophysics Data System (ADS)

van Herwijnen, Alec; Failletaz, Jerome; Berhod, Nicole; Mitterer, Christoph

2013-04-01

Glide avalanches occur when the entire snowpack glides over the ground until an avalanche releases. These avalanches are difficult to forecast since the gliding process can take place over a few hours up to several weeks or months. The presence of liquid water at the interface between the snow cover and the ground surface is of primary importance as it reduces frictional support. Glide avalanches are often preceded by the opening of a tensile crack in the snow cover, called a glide crack. Past research has shown that glide crack opening accelerates prior to avalanche release. During the winter of 2012-2013, we monitored glide crack expansion using time-lapse photography in combination with a seismic sensor and two heat flux sensors on a slope with well documented glide avalanche activity in the Eastern Swiss Alps above Davos, Switzerland. To track changes in glide rates, the number of dark pixels in an area around the glide crack is counted in each image. Using this technique, we observed an increase in glide rates prior to avalanche release. Since the field site is located very close to the town of Davos, the seismic data was very noisy. Nevertheless, the accelerated snow gliding observed in the time-lapse images coincided with increased seismic activity. Overall, these results show that a combination of time-lapse photography with seismic monitoring could provide valuable insight into glide avalanche release. Recordings of the heat flux plates show that the energy input from the soil is fairly small and constant throughout the observed period. The results suggest that ground heat flux is a minor contributor to the water production at the snow-soil interface. Instead, the presence of water at the base of the snowpack is probably due to a strong hydraulic pressure gradient at the snow-soil interface.

Time-Lapse Video Microscopy for Assessment of EYFP-Parkin Aggregation as a Marker for Cellular Mitophagy

PubMed Central

Di Sante, Gabriele; Casimiro, Mathew C.; Pestell, Timothy G.; Pestell, Richard G.

2016-01-01

Time-lapse video microscopy can be defined as the real time imaging of living cells. This technique relies on the collection of images at different time points. Time intervals can be set through a computer interface that controls the microscope-integrated camera. This kind of microscopy requires both the ability to acquire very rapid events and the signal generated by the observed cellular structure during these events. After the images have been collected, a movie of the entire experiment is assembled to show the dynamic of the molecular events of interest. Time-lapse video microscopy has a broad range of applications in the biomedical research field and is a powerful and unique tool for following the dynamics of the cellular events in real time. Through this technique, we can assess cellular events such as migration, division, signal transduction, growth, and death. Moreover, using fluorescent molecular probes we are able to mark specific molecules, such as DNA, RNA or proteins and follow them through their molecular pathways and functions. Time-lapse video microscopy has multiple advantages, the major one being the ability to collect data at the single-cell level, that make it a unique technology for investigation in the field of cell biology. However, time-lapse video microscopy has limitations that can interfere with the acquisition of high quality images. Images can be compromised by both external factors; temperature fluctuations, vibrations, humidity and internal factors; pH, cell motility. Herein, we describe a protocol for the dynamic acquisition of a specific protein, Parkin, fused with the enhanced yellow fluorescent protein (EYFP) in order to track the selective removal of damaged mitochondria, using a time-lapse video microscopy approach. PMID:27168174

Time-Lapse Video Microscopy for Assessment of EYFP-Parkin Aggregation as a Marker for Cellular Mitophagy.

PubMed

Di Sante, Gabriele; Casimiro, Mathew C; Pestell, Timothy G; Pestell, Richard G

2016-05-04

Time-lapse video microscopy can be defined as the real time imaging of living cells. This technique relies on the collection of images at different time points. Time intervals can be set through a computer interface that controls the microscope-integrated camera. This kind of microscopy requires both the ability to acquire very rapid events and the signal generated by the observed cellular structure during these events. After the images have been collected, a movie of the entire experiment is assembled to show the dynamic of the molecular events of interest. Time-lapse video microscopy has a broad range of applications in the biomedical research field and is a powerful and unique tool for following the dynamics of the cellular events in real time. Through this technique, we can assess cellular events such as migration, division, signal transduction, growth, and death. Moreover, using fluorescent molecular probes we are able to mark specific molecules, such as DNA, RNA or proteins and follow them through their molecular pathways and functions. Time-lapse video microscopy has multiple advantages, the major one being the ability to collect data at the single-cell level, that make it a unique technology for investigation in the field of cell biology. However, time-lapse video microscopy has limitations that can interfere with the acquisition of high quality images. Images can be compromised by both external factors; temperature fluctuations, vibrations, humidity and internal factors; pH, cell motility. Herein, we describe a protocol for the dynamic acquisition of a specific protein, Parkin, fused with the enhanced yellow fluorescent protein (EYFP) in order to track the selective removal of damaged mitochondria, using a time-lapse video microscopy approach.

Function of the alpha 6 Integrins in Breast Carcinoma

DTIC Science & Technology

2001-10-01

motility on laminin-1. Time-lapse was resistant to solubilization with Triton X-100. Cy- videomicroscopy of clone A cells on laminin-1 revealed...represent SEM. The Integrin a6/34 Participates in the Dynamic Formation of Actin-based Motility Structures: Filopodia lapse videomicroscopy in serum-free...threefold greater time-lapse videomicroscopy to understand how the cu6P34 than on an equivalent concentration of collagen type I, integrin contributes to

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e196791 - iss042e197504). Shows Earth views. Day time views turn into night time views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e190769 - iss042e191096). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e330173 - iss042e331530). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e238532 - iss042e239150). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e177446 - iss042e178444 ). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e110489 - iss042e111902). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e212874 - iss042e213080). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e285752 - iss042e286830). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e116561 - iss042e117265). Shows Earth views. Solar Array Wing (SAW) in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (iss042e071550 - iss042e072050). Shows Earth views over Africa, Sinai, Saudi Arabia, Jordan and Israel.

Lapse time and frequency-dependent coda wave attenuation for Delhi and its surrounding regions

NASA Astrophysics Data System (ADS)

Das, Rabin; Mukhopadhyay, Sagarika; Singh, Ravi Kant; Baidya, Pushap R.

2018-07-01

Attenuation of seismic wave energy of Delhi and its surrounding regions has been estimated using coda of local earthquakes. Estimated quality factor (Qc) values are strongly dependent on frequency and lapse time. Frequency dependence of Qc has been estimated from the relationship Qc(f) = Q0fn for different lapse time window lengths. Q0 and n values vary from 73 to 453 and 0.97 to 0.63 for lapse time window lengths of 15 s to 90 s respectively. Average estimated frequency dependent relation is, Qc(f) = 135 ± 8f0.96±0.02 for the entire region for a window length of 30 s, where the average Qc value varies from 200 at 1.5 Hz to 1962 at 16 Hz. These values show that the region is seismically active and highly heterogeneous. The entire study region is divided into two sub-regions according to the geology of the area to investigate if there is a spatial variation in attenuation characteristics in this region. It is observed that at smaller lapse time both regions have similar Qc values. However, at larger lapse times the rate of increase of Qc with frequency is larger for Region 2 compared to Region 1. This is understandable, as it is closer to the tectonically more active Himalayan ranges and seismically more active compared to Region 1. The difference in variation of Qc with frequencies for the two regions is such that at larger lapse time and higher frequencies Region 2 shows higher Qc compared to Region 1. For lower frequencies the opposite situation is true. This indicates that there is a systematic variation in attenuation characteristics from the south (Region 1) to the north (Region 2) in the deeper part of the study area. This variation can be explained in terms of an increase in heat flow and a decrease in the age of the rocks from south to north.

Combined interpretation of radar, hydraulic, and tracer data from a fractured-rock aquifer near Mirror Lake, New Hampshire, USA

USGS Publications Warehouse

Day-Lewis, F. D.; Lane, J.W.; Gorelick, S.M.

2006-01-01

An integrated interpretation of field experimental cross-hole radar, tracer, and hydraulic data demonstrates the value of combining time-lapse geophysical monitoring with conventional hydrologic measurements for improved characterization of a fractured-rock aquifer. Time-lapse difference-attenuation radar tomography was conducted during saline tracer experiments at the US Geological Survey Fractured Rock Hydrology Research Site near Mirror Lake, Grafton County, New Hampshire, USA. The presence of electrically conductive saline tracer effectively illuminates permeable fractures or pathways for geophysical imaging. The geophysical results guide the construction of three-dimensional numerical models of ground-water flow and solute transport. In an effort to explore alternative explanations for the tracer and tomographic data, a suite of conceptual models involving heterogeneous hydraulic conductivity fields and rate-limited mass transfer are considered. Calibration data include tracer concentrations, the arrival time of peak concentration at the outlet, and steady-state hydraulic head. Results from the coupled inversion procedure suggest that much of the tracer mass migrated outside the three tomographic image planes, and that solute is likely transported by two pathways through the system. This work provides basic and site-specific insights into the control of permeability heterogeneity on ground-water flow and solute transport in fractured rock. ?? Springer-Verlag 2004.

A-3 Construction Time Lapse

NASA Technical Reports Server (NTRS)

2009-01-01

A time lapse from start to finish of steel erection for the 235-foot tall A-3 Test Stand. Ground work for the stand was broken in August 2008 and the final structural steel beam was placed April 9, 2009.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

s time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e207712 - iss042e209132 ). Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e203119 - iss042e203971). Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e334978 - iss042e335976). Shows Earth views. Solar Array Wing (SAW) comes into view.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e324104 - iss042e325631). Shows Earth views. Soyuz and Progress spacecrafts come into view.

Soil Moisture Monitoring using Surface Electrical Resistivity measurements

NASA Astrophysics Data System (ADS)

Calamita, Giuseppe; Perrone, Angela; Brocca, Luca; Straface, Salvatore

2017-04-01

The relevant role played by the soil moisture (SM) for global and local natural processes results in an explicit interest for its spatial and temporal estimation in the vadose zone coming from different scientific areas - i.e. eco-hydrology, hydrogeology, atmospheric research, soil and plant sciences, etc... A deeper understanding of natural processes requires the collection of data on a higher number of points at increasingly higher spatial scales in order to validate hydrological numerical simulations. In order to take the best advantage of the Electrical Resistivity (ER) data with their non-invasive and cost-effective properties, sequential Gaussian geostatistical simulations (sGs) can be applied to monitor the SM distribution into the soil by means of a few SM measurements and a densely regular ER grid of monitoring. With this aim, co-located SM measurements using mobile TDR probes (MiniTrase), and ER measurements, obtained by using a four-electrode device coupled with a geo-resistivimeter (Syscal Junior), were collected during two surveys carried out on a 200 × 60 m2 area. Two time surveys were carried out during which Data were collected at a depth of around 20 cm for more than 800 points adopting a regular grid sampling scheme with steps (5 m) varying according to logistic and soil compaction constrains. The results of this study are robust due to the high number of measurements available for either variables which strengthen the confidence in the covariance function estimated. Moreover, the findings obtained using sGs show that it is possible to estimate soil moisture variations in the pedological zone by means of time-lapse electrical resistivity and a few SM measurements.

Lab-X-ray multidimensional imaging of processes inside porous media

NASA Astrophysics Data System (ADS)

Godinho, Jose

2017-04-01

Time-lapse and other multidimensional X-ray imaging techniques have mostly been applied using synchrotron radiation, which limits accessibility and complicates data analysis. Here, we present new time-lapse imaging approaches using laboratory X-ray computed microtomography (CT) to study transformations inside porous media. Specifically, three methods will be presented: 1) Quantitative time-lapse radiography to study sub-second processes. For example to study the penetration of particles into fractures and pores, which is essential to understand how proppants keep fractures opened during hydraulic fracturing and how filter cakes form during borehole drilling. 2) Combination of time-lapse CT with diffraction tomography to study the transformation between bio-inspired polymorphs in 6D, e.g. mineral phase transformation between ACC, Vaterite and Calcite - CaCO3, and between ACS, Anhydrite and Gypsum - CaSO4. Crystals can be resolved in nanopores down to 7 nm (over 100 times smaller than the resolution of CT), which allows studying the effect of confinement on phase stability and growth rates. 3) Fast iterative helical micro-CT scanning to study samples of high ratio height to width (e.g. long cores) with optimal resolution. Here we show how this can be useful to study the distribution of the products from fluid-mediated mineral reactions throughout longer reaction paths and more representative volumes. Using state of the art reconstruction algorithms allows reducing the scanning times from over ten hours to below two hours enabling time-lapse studies. It is expected that these new techniques will open new possibilities for time-lapse imaging of a wider range of geological processes using laboratory X-ray CT, thereby increasing the accessibility of multidimensional imaging to a larger number of users and applications in geology.

Momentary factors during marijuana use as predictors of lapse during attempted abstinence in young adults.

PubMed

Shrier, Lydia A; Sarda, Vishnudas; Jonestrask, Cassandra; Harris, Sion Kim

2018-08-01

Young adults using marijuana heavily often try multiple times to quit on their own. We sought to identify momentary experiences during marijuana use that could aid in predicting lapse when young adults subsequently attempt abstinence. Young adults (N=34) age 18-25 using marijuana ≥5days/week and planning to quit completed a survey of sociodemographic characteristics, substance use, marijuana expectancies, use motives, perceived social support, and confidence to abstain. They completed ecological momentary assessment (EMA) smartphone reports several times/day for two weeks prior to, then during two weeks of attempted abstinence. Use period EMA reports assessed affect, craving, accessibility, situational permissibility, use, and motivation to abstain. Baseline survey and EMA data were examined in relation to subsequent lapse during attempted abstinence. Nearly 3 in 4 participants (73.5%) reported lapsing during attempted abstinence from marijuana. On bivariate analyses, lower baseline dependence severity score, negative effect expectancies, perceived family support, and confidence to abstain were each associated with lapse. Of the use period EMA variables, greater percent of days with marijuana use, reports of easy accessibility, and reports of situational permissibility were each associated with lapse. Modeled together, negative effect expectancies, perceived family support, confidence to abstain, and situational permissibility during use were highly accurate in predicting lapse during attempted abstinence. Momentary factors may add to conventionally-surveyed characteristics to enhance prediction of lapse during attempted abstinence among young adults with heavy marijuana use. Momentary assessment prior to a quit attempt may thus enable more effective personalized approaches to preventing lapse. Copyright © 2018 Elsevier Ltd. All rights reserved.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e103580 - iss042e104044). Shows night time Earth views. Solar Array Wing (SAW) and Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e211498 - iss042e212135). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e162807 - iss042e163936). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e308288 - iss042e309536). Shows Earth views taken from a window aboard the International Space Station (ISS).

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e210380 - iss042e211441). Shows Earth views. Solar Array Wing (SAW) in and out of view.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e193144 - iss042e194102). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e209133 - iss042e210379). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e215401 -iss042e215812). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e290689 - iss042e291289). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e249923 - iss042e250759). Shows Earth views. Space Station Remote Manipulator system (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e170341 - iss042e171462). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e244330 - iss042e245101). Shows Earth views. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

2D Time-lapse Seismic Tomography Using An Active Time Constraint (ATC) Approach

EPA Science Inventory

We propose a 2D seismic time-lapse inversion approach to image the evolution of seismic velocities over time and space. The forward modeling is based on solving the eikonal equation using a second-order fast marching method. The wave-paths are represented by Fresnel volumes rathe...

Compact multi-band fluorescent microscope with an electrically tunable lens for autofocusing

PubMed Central

Wang, Zhaojun; Lei, Ming; Yao, Baoli; Cai, Yanan; Liang, Yansheng; Yang, Yanlong; Yang, Xibin; Li, Hui; Xiong, Daxi

2015-01-01

Autofocusing is a routine technique in redressing focus drift that occurs in time-lapse microscopic image acquisition. To date, most automatic microscopes are designed on the distance detection scheme to fulfill the autofocusing operation, which may suffer from the low contrast of the reflected signal due to the refractive index mismatch at the water/glass interface. To achieve high autofocusing speed with minimal motion artifacts, we developed a compact multi-band fluorescent microscope with an electrically tunable lens (ETL) device for autofocusing. A modified searching algorithm based on equidistant scanning and curve fitting is proposed, which no longer requires a single-peak focus curve and then efficiently restrains the impact of external disturbance. This technique enables us to achieve an autofocusing time of down to 170 ms and the reproductivity of over 97%. The imaging head of the microscope has dimensions of 12 cm × 12 cm × 6 cm. This portable instrument can easily fit inside standard incubators for real-time imaging of living specimens. PMID:26601001

O-Ring Installation for Underwater Components and Applications

DTIC Science & Technology

1982-04-15

cure is effected and the heat source removed. AGING -- To undergo changes in physical properties with age or lapse of time. AIR CHECKS -- Surface...the use of heat and pressure, resulting in greatly increased strength and elasticity of rubber -like materials. VULCANIZING AGENT -- A material that...Cross Section Dia -- Diameter EP, EPM, EPDM -- Ethylene-Propylene Rubber F or ’F -- Degrees Fahrenheit FED -- Federal Specification FPM -- Fluorocarbon

Local modification of the surface state properties at dilute coverages: CO/Cu(111)

NASA Astrophysics Data System (ADS)

Zaum, Ch.; Meyer-auf-der-Heide, K. M.; Morgenstern, K.

2018-04-01

We follow the diffusion of CO molecules on Cu(111) by time-lapsed low-temperature scanning tunneling microscopy. The diffusivity of individual CO molecules oscillates with the distance to its nearest neighbor due to the long-range interaction mediated by the surface state electrons. The markedly different wavelengths of the oscillation at a coverage of 0.6% ML as compared to the one at 6% ML coverage correspond to two different wavelengths of the surface state electrons, consistent with a shift of the surface state by 340 meV. This surprisingly large shift as compared to results of averaging methods suggests a local modification of the surface state properties.

A Geophysical Characterization & Monitoring Strategy for Determining Hydrologic Processes in the Hyporheic Corridor at the Hanford 300-Area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Slater, Lee; Day-Lewis, Frederick; Lane, John

2011-08-31

The primary objective of this research was to advance the prediction of solute transport between the Uranium contaminated Hanford aquifer and the Columbia River at the Hanford 300 Area by improving understanding of how fluctuations in river stage, combined with subsurface heterogeneity, impart spatiotemporal complexity to solute exchange along the Columbia River corridor. Our work explored the use of continuous waterborne electrical imaging (CWEI), in conjunction with fiber-optic distributed temperature sensor (FO-DTS) and time-lapse resistivity monitoring, to improve the conceptual model for how groundwater/surface water exchange regulates uranium transport. We also investigated how resistivity and induced polarization can be usedmore » to generate spatially rich estimates of the variation in depth to the Hanford-Ringold (H-R) contact between the river and the 300 Area Integrated Field Research Challenge (IFRC) site. Inversion of the CWEI datasets (a data rich survey containing {approx}60,000 measurements) provided predictions of the distributions of electrical resistivity and polarizability, from which the spatial complexity of the primary hydrogeologic units along the river corridor was reconstructed. Variation in the depth to the interface between the overlying coarse-grained, high permeability Hanford Formation and the underlying finer-grained, less permeable Ringold Formation, an important contact that limits vertical migration of contaminants, has been resolved along {approx}3 km of the river corridor centered on the IFRC site in the Hanford 300 Area. Spatial variability in the thickness of the Hanford Formation captured in the CWEI datasets indicates that previous studies based on borehole projections and drive-point and multi-level sampling likely overestimate the contributing area for uranium exchange within the Columbia River at the Hanford 300 Area. Resistivity and induced polarization imaging between the river and the 300 Area IFRC further imaged spatial variability in the depth to the Hanford-Ringold inland over a critical region where borehole information is absent, identifying evidence for a continuous depression in the H-R contact between the IFRC and the river corridor. Strong natural contrasts in temperature and specific conductance of river water compared to groundwater at this site, along with periodic river stage fluctuations driven by dam operations, were exploited to yield new insights into the dynamics of groundwater-surface water interaction. Whereas FO-DTS datasets have provided meter-scale measurements of focused groundwater discharge at the riverbed along the corridor, continuous resistivity monitoring has non-invasively imaged spatiotemporal variation in the resistivity inland driven by river stage fluctuations. Time series and time-frequency analysis of FO-DTS and 3D resistivity datasets has provided insights into the role of forcing variables, primarily daily dam operations, in regulating the occurrence of focused exchange at the riverbed and its extension inland. High amplitudes in the DTS and 3D resistivity signals for long periods that dominate the stage time series identify regions along the corridor where stage-driven exchange is preferentially focused. Our work has demonstrated how time-series analysis of both time-lapse resistivity and DTS datasets, in conjunction with resistivity/IP imaging of lithology, can improve understanding of groundwater-surface water exchange along river corridors, offering unique opportunities to connect stage-driven groundwater discharge observed with DTS on the riverbed to stage-driven groundwater and solute fluctuations captured with resistivity inland.« less

FINAL PROJECT REPORT: A Geophysical Characterization & Monitoring Strategy for Determining Hydrologic Processes in the Hyporheic Corridor at the Hanford 300-Area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lee Slater

2011-08-15

The primary objective of this research was to advance the prediction of solute transport between the Uranium contaminated Hanford aquifer and the Columbia River at the Hanford 300 Area by improving understanding of how fluctuations in river stage, combined with subsurface heterogeneity, impart spatiotemporal complexity to solute exchange along the Columbia River corridor. Our work explored the use of continuous waterborne electrical imaging (CWEI), in conjunction with fiber-optic distributed temperature sensor (FO-DTS) and time-lapse resistivity monitoring, to improve the conceptual model for how groundwater/surface water exchange regulates uranium transport. We also investigated how resistivity and induced polarization can be usedmore » to generate spatially rich estimates of the variation in depth to the Hanford-Ringold (H-R) contact between the river and the 300 Area Integrated Field Research Challenge (IFRC) site. Inversion of the CWEI datasets (a data rich survey containing ~60,000 measurements) provided predictions of the distributions of electrical resistivity and polarizability, from which the spatial complexity of the primary hydrogeologic units along the river corridor was reconstructed. Variation in the depth to the interface between the overlying coarse-grained, high permeability Hanford Formation and the underlying finer-grained, less permeable Ringold Formation, an important contact that limits vertical migration of contaminants, has been resolved along ~3 km of the river corridor centered on the IFRC site in the Hanford 300 Area. Spatial variability in the thickness of the Hanford Formation captured in the CWEI datasets indicates that previous studies based on borehole projections and drive-point and multi-level sampling likely overestimate the contributing area for uranium exchange within the Columbia River at the Hanford 300 Area. Resistivity and induced polarization imaging between the river and the 300 Area IFRC further imaged spatial variability in the depth to the Hanford-Ringold inland over a critical region where borehole information is absent, identifying evidence for a continuous depression in the H-R contact between the IFRC and the river corridor. Strong natural contrasts in temperature and specific conductance of river water compared to groundwater at this site, along with periodic river stage fluctuations driven by dam operations, were exploited to yield new insights into the dynamics of groundwater-surface water interaction. Whereas FO-DTS datasets have provided meter-scale measurements of focused groundwater discharge at the riverbed along the corridor, continuous resistivity monitoring has non-invasively imaged spatiotemporal variation in the resistivity inland driven by river stage fluctuations. Time series and time-frequency analysis of FO-DTS and 3D resistivity datasets has provided insights into the role of forcing variables, primarily daily dam operations, in regulating the occurrence of focused exchange at the riverbed and its extension inland. High amplitudes in the DTS and 3D resistivity signals for long periods that dominate the stage time series identify regions along the corridor where stage-driven exchange is preferentially focused. Our work has demonstrated how time-series analysis of both time-lapse resistivity and DTS datasets, in conjunction with resistivity/IP imaging of lithology, can improve understanding of groundwater-surface water exchange along river corridors, offering unique opportunities to connect stage-driven groundwater discharge observed with DTS on the riverbed to stage-driven groundwater and solute fluctuations captured with resistivity inland.« less

Time-lapse microscopy using smartphone with augmented reality markers.

PubMed

Baek, Dongyoub; Cho, Sungmin; Yun, Kyungwon; Youn, Keehong; Bang, Hyunwoo

2014-04-01

A prototype system that replaces the conventional time-lapse imaging in microscopic inspection for use with smartphones is presented. Existing time-lapse imaging requires a video data feed between a microscope and a computer that varies depending on the type of image grabber. Even with proper hardware setups, a series of tedious and repetitive tasks is still required to relocate to the region-of-interest (ROI) of the specimens. In order to simplify the system and improve the efficiency of time-lapse imaging tasks, a smartphone-based platform utilizing microscopic augmented reality (μ-AR) markers is proposed. To evaluate the feasibility and efficiency of the proposed system, a user test was designed and performed, measuring the elapse time for a trial of the task starting from the execution of the application software to the completion of restoring and imaging of an ROI saved in advance. The results of the user test showed that the average elapse time was 65.3 ± 15.2 s with 6.86 ± 3.61 μm of position error and 0.08 ± 0.40 degrees of angle error. This indicates that the time-lapse imaging task was accomplished rapidly with a high level of accuracy. Thus, simplification of both the system and the task was achieved via our proposed system. Copyright © 2014 Wiley Periodicals, Inc.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2015-05-18

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss042e218184 - iss042e219070 ). Shows night time views over Egypt, Sinai, Saudi Arabia, Jordan and Israel. Space Station Remote Manipulator System (SSRMS) or Canadarm in foreground.

Active and passive electrical and seismic time-lapse monitoring of earthen embankments

NASA Astrophysics Data System (ADS)

Rittgers, Justin Bradley

In this dissertation, I present research involving the application of active and passive geophysical data collection, data assimilation, and inverse modeling for the purpose of earthen embankment infrastructure assessment. Throughout the dissertation, I identify several data characteristics, and several challenges intrinsic to characterization and imaging of earthen embankments and anomalous seepage phenomena, from both a static and time-lapse geophysical monitoring perspective. I begin with the presentation of a field study conducted on a seeping earthen dam, involving static and independent inversions of active tomography data sets, and self-potential modeling of fluid flow within a confined aquifer. Additionally, I present results of active and passive time-lapse geophysical monitoring conducted during two meso-scale laboratory experiments involving the failure and self-healing of embankment filter materials via induced vertical cracking. Identified data signatures and trends, as well as 4D inversion results, are discussed as an underlying motivation for conducting subsequent research. Next, I present a new 4D acoustic emissions source localization algorithm that is applied to passive seismic monitoring data collected during a full-scale embankment failure test. Acoustic emissions localization results are then used to help spatially constrain 4D inversion of collocated self-potential monitoring data. I then turn to time-lapse joint inversion of active tomographic data sets applied to the characterization and monitoring of earthen embankments. Here, I develop a new technique for applying spatiotemporally varying structural joint inversion constraints. The new technique, referred to as Automatic Joint Constraints (AJC), is first demonstrated on a synthetic 2D joint model space, and is then applied to real geophysical monitoring data sets collected during a full-scale earthen embankment piping-failure test. Finally, I discuss some non-technical issues related to earthen embankment failures from a Science, Technology, Engineering, and Policy (STEP) perspective. Here, I discuss how the proclaimed scientific expertise and shifting of responsibility (Responsibilization) by governing entities tasked with operating and maintaining water storage and conveyance infrastructure throughout the United States tends to create barriers for 1) public voice and participation in relevant technical activities and outcomes, 2) meaningful discussions with the public and media during crisis communication, and 3) public perception of risk and the associated resilience of downhill communities.

QueSST Time-lapse

NASA Image and Video Library

2017-02-27

Quiet Supersonic Technology (QueSST) X-plane in the 8x6 Supersonic Wind Tunnel at NASA Glenn Research Center. This time-lapse shows the model support structure buildup and balance checkout as well as the installation of the model in the test section.

ISS Expedition 42 Time Lapse Video of Earth

NASA Image and Video Library

2014-09-29

This time lapse video taken during ISS Expedition 42 is assembled from JSC still photo collection (still photos iss041e37762 - iss041e39788). Shows Earth and aurora views. Partial views of ISS in and out of view.

Photographer : JPL Range : 1 million kilometers Voyager 2 completed a dramatic 10 hour time lapse

NASA Technical Reports Server (NTRS)

1979-01-01

Photographer : JPL Range : 1 million kilometers Voyager 2 completed a dramatic 10 hour time lapse photo sequence to monitor the active volcanos on Jupiter's moon Io following the spacecraft's closest approach to Jupiter. This picture is one of about 200 images that will be used to generate a time lapse motion picture to illustrate Io's volcanic activity. On the bright limb, two of the plumes (P-5 & P-6) discovered in March by Voyager 1 are again visible. The plumes are spewing materials to a height of about 100 kilometers.

Selected time-lapse movies of the east rift zone eruption of KĪlauea Volcano, 2004–2008

USGS Publications Warehouse

Orr, Tim R.

2011-01-01

Since 2004, the U.S. Geological Survey's Hawaiian Volcano Observatory has used mass-market digital time-lapse cameras and network-enabled Webcams for visual monitoring and research. The 26 time-lapse movies in this report were selected from the vast collection of images acquired by these camera systems during 2004–2008. Chosen for their content and broad aesthetic appeal, these image sequences document a variety of flow-field and vent processes from Kīlauea's east rift zone eruption, which began in 1983 and is still (as of 2011) ongoing.

Localized time-lapse elastic waveform inversion using wavefield injection and extrapolation: 2-D parametric studies

NASA Astrophysics Data System (ADS)

Yuan, Shihao; Fuji, Nobuaki; Singh, Satish; Borisov, Dmitry

2017-06-01

We present a methodology to invert seismic data for a localized area by combining source-side wavefield injection and receiver-side extrapolation method. Despite the high resolving power of seismic full waveform inversion, the computational cost for practical scale elastic or viscoelastic waveform inversion remains a heavy burden. This can be much more severe for time-lapse surveys, which require real-time seismic imaging on a daily or weekly basis. Besides, changes of the structure during time-lapse surveys are likely to occur in a small area rather than the whole region of seismic experiments, such as oil and gas reservoir or CO2 injection wells. We thus propose an approach that allows to image effectively and quantitatively the localized structure changes far deep from both source and receiver arrays. In our method, we perform both forward and back propagation only inside the target region. First, we look for the equivalent source expression enclosing the region of interest by using the wavefield injection method. Second, we extrapolate wavefield from physical receivers located near the Earth's surface or on the ocean bottom to an array of virtual receivers in the subsurface by using correlation-type representation theorem. In this study, we present various 2-D elastic numerical examples of the proposed method and quantitatively evaluate errors in obtained models, in comparison to those of conventional full-model inversions. The results show that the proposed localized waveform inversion is not only efficient and robust but also accurate even under the existence of errors in both initial models and observed data.

Gliding Motility of Babesia bovis Merozoites Visualized by Time-Lapse Video Microscopy

PubMed Central

Asada, Masahito; Goto, Yasuyuki; Yahata, Kazuhide; Yokoyama, Naoaki; Kawai, Satoru; Inoue, Noboru; Kaneko, Osamu; Kawazu, Shin-ichiro

2012-01-01

Background Babesia bovis is an apicomplexan intraerythrocytic protozoan parasite that induces babesiosis in cattle after transmission by ticks. During specific stages of the apicomplexan parasite lifecycle, such as the sporozoites of Plasmodium falciparum and tachyzoites of Toxoplasma gondii, host cells are targeted for invasion using a unique, active process termed “gliding motility”. However, it is not thoroughly understood how the merozoites of B. bovis target and invade host red blood cells (RBCs), and gliding motility has so far not been observed in the parasite. Methodology/Principal Findings Gliding motility of B. bovis merozoites was revealed by time-lapse video microscopy. The recorded images revealed that the process included egress of the merozoites from the infected RBC, gliding motility, and subsequent invasion into new RBCs. The gliding motility of B. bovis merozoites was similar to the helical gliding of Toxoplasma tachyzoites. The trails left by the merozoites were detected by indirect immunofluorescence assay using antiserum against B. bovis merozoite surface antigen 1. Inhibition of gliding motility by actin filament polymerization or depolymerization indicated that the gliding motility was driven by actomyosin dependent process. In addition, we revealed the timing of breakdown of the parasitophorous vacuole. Time-lapse image analysis of membrane-stained bovine RBCs showed formation and breakdown of the parasitophorous vacuole within ten minutes of invasion. Conclusions/Significance This is the first report of the gliding motility of B. bovis. Since merozoites of Plasmodium parasites do not glide on a substrate, the gliding motility of B. bovis merozoites is a notable finding. PMID:22506073

The association of positive emotion and first smoking lapse: An ecological momentary assessment study.

PubMed

Vinci, Christine; Li, Liang; Wu, Cai; Lam, Cho Y; Guo, Lin; Correa-Fernández, Virmarie; Spears, Claire A; Hoover, Diana S; Etcheverry, Paul E; Wetter, David W

2017-11-01

Individuals attempting to quit smoking typically have poor success rates, and the majority fail to maintain long-term abstinence. Although a large body of evidence documents the impact of negative affect on reducing abstinence, there is a much smaller body of research on positive emotions, which could be an important mechanism that is associated with successful cessation. As such, this study examined positive emotions in real-time via ecological momentary assessment (EMA) to determine whether discrete positive emotions were uniquely related to 2 cessation milestones: quit day lapse and first lapse. Participants were 391 smokers who received tobacco cessation treatment. EMAs were completed pre- and postquit, and positive emotion was assessed with 3 items (enthusiastic, happy, and relaxed) rated on 5-point Likert scales. Analyses examined the associations of the means and slopes of each emotion on the current day with the likelihood of lapse on the following day. When controlling for relevant covariates, prequit positive emotions were not related to quit day lapse. However, postquit positive emotions were associated with first lapse. Specifically, high levels of happiness and relaxation, as well as increasing levels of enthusiasm, happiness, and relaxation were related to a lower likelihood of next day lapse. These are some of the first real-time, real-world data to demonstrate that distinct positive emotions are associated with a lower risk of lapse during the postquit period among smokers attempting to quit. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Analysis of one year time-lapse electrical data to unravel hydrological processes acting on a clayey landslide

NASA Astrophysics Data System (ADS)

Gance, J.; Sailhac, P.; Malet, J.; Supper, R.; Jochum, B.; Ottowitz, D.; Grandjean, G.

2013-12-01

Movements of water in the topsoil (infiltration, run-off and evaporation) influence changes in slope stability which is the main controlling factor of landslide triggering (e.g. van Asch et al., 1999). Among the petrophysical parameters that can provide time-lapse sections of the topsoil, we consider the electrical conductivity for its sensitivity to soil water contents. Based on recent works which showed the possibility of monitoring the hydrological response of a clay-shale slope to a controlled rainfall experiment (Travelletti et al., 2012), we installed a permanent electrical monitoring experiment at the Super-Sauze landslide for long-term monitoring (one year) of natural meteorological events. We used the GEOMON4D resistivimeter, developed by the Austrian Geological Survey (Vienna, Austria) for experiments needing high rate of data acquisition, records of full signal samples for noise detection, remote controlled management and automatic data transfer (Supper et al., 2002, 2003 & 2004). The electrode positions varying with time, we installed two terrestrial optical cameras to characterize the changes in dipole geometry. Several hydrological sensors were installed along the profile to measure soil temperature, water temperature and conductivity, ground water level and soil humidity in the vadose zone. The main challenge is the processing of ca. 4.2 million of electrical resistivity data. In this difficult context, the potential factors influencing electrical resistivity with time without modification of soil saturation are the relative changes in the dipole geometry (linked to the displacement of the electrodes), changes in soil and water temperature, change in material porosity due to compaction/dilatation caused by the landslide movement. Therefore, before any inversion of data, we verify the presence of possible 3D effects, and assess the measurement accuracy and uncertainty. An apparent resistivity variation threshold, from which a modification of the saturation can be attributed, is determined. From those first results, we first investigate changes in the apparent resistivity. Responses to different hydrological processes (such as soil freezing/thawing, snow melting, high intensity rainfall, debris flow events) occurring during the monitoring period are detectable on the inversed resistivities over short periods. For example The results of the study highlight the difficulty to monitor hydrological changes on a clay-shale landslide, and will permit to improve such future device. Although a quantitative interpretation of the apparent resistivity is impossible, typical responses are clearly detectable and allows a first qualitative interpretation of hydrological changes in the landslide

Application of LANDSAT MSS data to the study of oceanographical environment. [Seto Inland Sea

NASA Technical Reports Server (NTRS)

Maruyasu, T. (Principal Investigator); Tsuchiya, K.; Ochiai, H.; Takeda, K.

1977-01-01

The author has identified the following significant results. LANDSAT MSS data of a three year time lapse indicate change of sea surface condition in Seto Inland Sea and coastal region. The red tide which formerly concentrated in the bay or inland sea now extends into an open sea. A small ocean vortex similar to mesoscale atmospheric vortex is revealed by the band 4 image of the satellite data. A manual photographic method applied to a single band image of MSS is effective in detecting sea surface pollution.

Influence of supervision ratios by anesthesiologists on first-case starts and critical portions of anesthetics.

PubMed

Epstein, Richard H; Dexter, Franklin

2012-03-01

Anesthesia groups may wish to decrease the supervision ratio for nontrainee providers. Because hospitals offer many first-case starts and focus on starting these cases on time, the number of anesthesiologists needed is sensitive to this ratio. The number of operating rooms that an anesthesiologist can supervise concurrently is determined by the probability of multiple simultaneous critical portions of cases (i.e., requiring presence) and the availability of cross-coverage. A simulation study showed peak occurrence of critical portions during first cases, and frequent supervision lapses. These predictions were tested using real data from an anesthesia information management system. The timing and duration of critical portions of cases were determined from 1 yr of data at a tertiary care hospital. The percentages of days with at least one supervision lapse occurring at supervision ratios between 1:1 and 1:3 were determined. Even at a supervision ratio of 1:2, lapses occurred on 35% of days (lower 95% confidence limit = 30%). The peak incidence occurred before 8:00 AM, P < 0.0001 for the hypothesis that most (i.e., >50%) lapses occurred before this time. The average time from operating room entry until ready for prepping and draping (i.e., anesthesia release time) during first case starts was 22.2 min (95% confidence interval 21.8-22.8 min). Decreasing the supervision ratio from 1:2 to 1:3 has a large effect on supervision lapses during first-case starts. To mitigate such lapses, either staggered starts or additional anesthesiologists working at the start of the day would be required.

Time-Lapse and Slow-Motion Tracking of Temperature Changes: Response Time of a Thermometer

ERIC Educational Resources Information Center

Moggio, L.; Onorato, P.; Gratton, L. M.; Oss, S.

2017-01-01

We propose the use of a smartphone based time-lapse and slow-motion video techniques together with tracking analysis as valuable tools for investigating thermal processes such as the response time of a thermometer. The two simple experimental activities presented here, suitable also for high school and undergraduate students, allow one to measure…

3D lens-free time-lapse microscopy for 3D cell culture

NASA Astrophysics Data System (ADS)

Berdeu, Anthony; Momey, Fabien; Laperrousaz, Bastien; Bordy, Thomas; Gidrol, Xavier; Dinten, Jean-Marc; Picollet-D'hahan, Nathalie; Allier, Cédric

2017-07-01

We propose a new imaging platform based on lens-free time-lapse microscopy for 3D cell culture and its dedicated algorithm lying on a fully 3D regularized inverse problem approach. First 3D+t results are presented

Determination of sub-daily glacier uplift and horizontal flow velocity with time-lapse images using ImGRAFT

NASA Astrophysics Data System (ADS)

Egli, Pascal; Mankoff, Ken; Mettra, François; Lane, Stuart

2017-04-01

This study investigates the application of feature tracking algorithms to monitoring of glacier uplift. Several publications have confirmed the occurrence of an uplift of the glacier surface in the late morning hours of the mid to late ablation season. This uplift is thought to be caused by high sub-glacial water pressures at the onset of melt caused by overnight-deposited sediment that blocks subglacial channels. We use time-lapse images from a camera mounted in front of the glacier tongue of Haut Glacier d'Arolla during August 2016 in combination with a Digital Elevation Model and GPS measurements in order to investigate the phenomenon of glacier uplift using the feature tracking toolbox ImGRAFT. Camera position is corrected for all images and the images are geo-rectified using Ground Control Points visible in every image. Changing lighting conditions due to different sun angles create substantial noise and complicate the image analysis. A small glacier uplift of the order of 5 cm over a time span of 3 hours may be observed on certain days, confirming previous research.

Air motion determination by tracking humidity patterns in isentropic layers

NASA Technical Reports Server (NTRS)

Mancuso, R. L.; Hall, D. J.

1975-01-01

Determining air motions by tracking humidity patterns in isentropic layers was investigated. Upper-air rawinsonde data from the NSSL network and from the AVE-II pilot experiment were used to simulate temperature and humidity profile data that will eventually be available from geosynchronous satellites. Polynomial surfaces that move with time were fitted to the mixing-ratio values of the different isentropic layers. The velocity components of the polynomial surfaces are part of the coefficients that are determined in order to give an optimum fitting of the data. In the mid-troposphere, the derived humidity motions were in good agreement with the winds measured by rawinsondes so long as there were few or no clouds and the lapse rate was relatively stable. In the lower troposphere, the humidity motions were unreliable primarily because of nonadiabatic processes and unstable lapse rates. In the upper troposphere, the humidity amounts were too low to be measured with sufficient accuracy to give reliable results. However, it appears that humidity motions could be used to provide mid-tropospheric wind data over large regions of the globe.

Time-lapse joint AVO inversion using generalized linear method based on exact Zoeppritz equations

NASA Astrophysics Data System (ADS)

Zhi, L.; Gu, H.

2017-12-01

The conventional method of time-lapse AVO (Amplitude Versus Offset) inversion is mainly based on the approximate expression of Zoeppritz equations. Though the approximate expression is concise and convenient to use, it has certain limitations. For example, its application condition is that the difference of elastic parameters between the upper medium and lower medium is little and the incident angle is small. In addition, the inversion of density is not stable. Therefore, we develop the method of time-lapse joint AVO inversion based on exact Zoeppritz equations. In this method, we apply exact Zoeppritz equations to calculate the reflection coefficient of PP wave. And in the construction of objective function for inversion, we use Taylor expansion to linearize the inversion problem. Through the joint AVO inversion of seismic data in baseline survey and monitor survey, we can obtain P-wave velocity, S-wave velocity, density in baseline survey and their time-lapse changes simultaneously. We can also estimate the oil saturation change according to inversion results. Compared with the time-lapse difference inversion, the joint inversion has a better applicability. It doesn't need some assumptions and can estimate more parameters simultaneously. Meanwhile, by using the generalized linear method, the inversion is easily realized and its calculation amount is small. We use the Marmousi model to generate synthetic seismic records to test and analyze the influence of random noise. Without noise, all estimation results are relatively accurate. With the increase of noise, P-wave velocity change and oil saturation change are stable and less affected by noise. S-wave velocity change is most affected by noise. Finally we use the actual field data of time-lapse seismic prospecting to process and the results can prove the availability and feasibility of our method in actual situation.

Cell-substrate impedance fluctuations of single amoeboid cells encode cell-shape and adhesion dynamics

NASA Astrophysics Data System (ADS)

Leonhardt, Helmar; Gerhardt, Matthias; Höppner, Nadine; Krüger, Kirsten; Tarantola, Marco; Beta, Carsten

2016-01-01

We show systematic electrical impedance measurements of single motile cells on microelectrodes. Wild-type cells and mutant strains were studied that differ in their cell-substrate adhesion strength. We recorded the projected cell area by time-lapse microscopy and observed irregular oscillations of the cell shape. These oscillations were correlated with long-term variations in the impedance signal. Superposed to these long-term trends, we observed fluctuations in the impedance signal. Their magnitude clearly correlated with the adhesion strength, suggesting that strongly adherent cells display more dynamic cell-substrate interactions.

Efficiency of time-lapse intervals and simple baits for camera surveys of wild pigs

USGS Publications Warehouse

Williams, B.L.; Holtfreter, R.W.; Ditchkoff, S.S.; Grand, J.B.

2011-01-01

Growing concerns surrounding established and expanding populations of wild pigs (Sus scrofa) have created the need for rapid and accurate surveys of these populations. We conducted surveys of a portion of the wild pig population on Fort Benning, Georgia, to determine if a longer time-lapse interval than had been previously used in surveys of wild pigs would generate similar detection results. We concurrently examined whether use of soured corn at camera sites affected the time necessary for pigs to locate a new camera site or the time pigs remained at a site. Our results suggest that a 9-min time-lapse interval generated dependable detection results for pigs and that soured corn neither attracted pigs to a site any quicker than plain, dry, whole-kernel corn, nor held them at a site longer. Maximization of time-lapse interval should decrease data and processing loads, and use of a simple, available bait should decrease cost and effort associated with more complicated baits; combination of these concepts should increase efficiency of wild pig surveys. ?? 2011 The Wildlife Society.

Critical Zone Co-dynamics: Quantifying Interactions between Subsurface, Land Surface, and Vegetation Properties Using UAV and Geophysical Approaches

NASA Astrophysics Data System (ADS)

Dafflon, B.; Leger, E.; Peterson, J.; Falco, N.; Wainwright, H. M.; Wu, Y.; Tran, A. P.; Brodie, E.; Williams, K. H.; Versteeg, R.; Hubbard, S. S.

2017-12-01

Improving understanding and modelling of terrestrial systems requires advances in measuring and quantifying interactions among subsurface, land surface and vegetation processes over relevant spatiotemporal scales. Such advances are important to quantify natural and managed ecosystem behaviors, as well as to predict how watershed systems respond to increasingly frequent hydrological perturbations, such as droughts, floods and early snowmelt. Our study focuses on the joint use of UAV-based multi-spectral aerial imaging, ground-based geophysical tomographic monitoring (incl., electrical and electromagnetic imaging) and point-scale sensing (soil moisture sensors and soil sampling) to quantify interactions between above and below ground compartments of the East River Watershed in the Upper Colorado River Basin. We evaluate linkages between physical properties (incl. soil composition, soil electrical conductivity, soil water content), metrics extracted from digital surface and terrain elevation models (incl., slope, wetness index) and vegetation properties (incl., greenness, plant type) in a 500 x 500 m hillslope-floodplain subsystem of the watershed. Data integration and analysis is supported by numerical approaches that simulate the control of soil and geomorphic characteristic on hydrological processes. Results provide an unprecedented window into critical zone interactions, revealing significant below- and above-ground co-dynamics. Baseline geophysical datasets provide lithological structure along the hillslope, which includes a surface soil horizon, underlain by a saprolite layer and the fractured Mancos shale. Time-lapse geophysical data show very different moisture dynamics in various compartments and locations during the winter and growing season. Integration with aerial imaging reveals a significant linkage between plant growth and the subsurface wetness, soil characteristics and the topographic gradient. The obtained information about the organization and connectivity of the landscape is being transferred to larger regions using aerial imaging and will be used to constrain multi-scale, multi-physics hydro-biogeochemical simulations of the East River watershed response to hydrological perturbations.

Characteristics of liquid product from the pyrolysis of waste plastic mixture at low and high temperatures: influence of lapse time of reaction.

PubMed

Lee, Kyong-Hwan; Shin, Dae-Hyun

2007-01-01

Pyrolysis of a waste plastic mixture (high-density polyethylene: low-density polyethylene: polypropylene: polystyrene = 3:2:3:1) into a liquid product was carried out in a stirred semi-batch reactor at low (350 degrees C) and high (400 degrees C) temperatures. The effect of lapse time of reaction in the reactor and also degradation temperature on the characteristics of the liquid product from pyrolysis of the mixture was investigated. Liquid products were described by cumulative amount distribution, paraffin, olefin, naphthene and aromatic (PONA) distribution and molecular weight distribution. Their characteristic was quite differed with a lapse time of reaction and also at a low and high degradation temperatures, because of the different physicochemical properties of the plastic types in the mixture. With increase of lapse time of reaction, the order for the main products in PONA components obtained at 350 degrees C was firstly aromatic products and then olefin products, while at 400 degrees C the order was firstly aromatic products, then olefin products and finally paraffin products. The experiments also showed from the molecular weight distribution of liquid PONA components that the paraffin and olefin products had a wide distribution by mainly random scission of polymer, but in the case of olefin products were produced by an end-chain scission mechanism as well as random scission mechanism, as evidenced by much more light olefin products. This phenomenon was evident at a higher degradation temperature. Also, both the light olefin and naphthene products with a molecular weight of around 120, as a main product, showed a similar trend as a function of lapse time, which had a maximum fraction at 343 min (at 350 degrees C) and 83 min (at 400 degrees C). Among PONA components, the highest concentrations of aromatic products were obtained with a molecular weight of around 100 at the fastest lapse time of reaction, regardless of degradation temperature. It was concluded that the characteristics of liquid product on the pyrolysis of plastic mixtures were strongly influenced by lapse time of reaction and degradation temperature.

Time-lapse camera observations of gas piston activity at Pu‘u ‘Ō‘ō, Kīlauea volcano, Hawai‘i

USGS Publications Warehouse

Orr, Tim R.; Rea, James

2012-01-01

Gas pistoning is a type of eruptive behavior described first at Kīlauea volcano and characterized by the (commonly) cyclic rise and fall of the lava surface within a volcanic vent or lava lake. Though recognized for decades, its cause continues to be debated, and determining why and when it occurs has important implications for understanding vesiculation and outgassing processes at basaltic volcanoes. Here, we describe gas piston activity that occurred at the Pu‘u ‘Ō‘ō cone, in Kīlauea’s east rift zone, during June 2006. Direct, detailed measurements of lava level, made from time-lapse camera images captured at close range, show that the gas pistons during the study period lasted from 2 to 60 min, had volumes ranging from 14 to 104 m3, displayed a slowing rise rate of the lava surface, and had an average gas release duration of 49 s. Our data are inconsistent with gas pistoning models that invoke gas slug rise or a dynamic pressure balance but are compatible with models which appeal to gas accumulation and loss near the top of the lava column, possibly through the generation and collapse of a foam layer.

The use of FDEM in hydrogeophysics: A review

NASA Astrophysics Data System (ADS)

Boaga, Jacopo

2017-04-01

Hydrogeophysics is a rapidly evolving discipline emerging from geophysical methods. Geophysical methods are nowadays able to illustrate not only the fabric and the structure of the underground, but also the subsurface processes that occur within it, as fluids dynamic and biogeochemical reactions. This is a growing wide inter-disciplinary field, specifically dedicated to revealing soil properties and monitoring processes of change due to soil/bio/atmosphere interactions. The discipline involves environmental, hydrological, agricultural research and counts application for several engineering purposes. The most frequently used techniques in the hydrogeophysical framework are the electric and electromagnetic methods because they are highly sensitive to soil physical properties such as texture, salinity, mineralogy, porosity and water content. Non-invasive techniques are applied in a number of problems related to characterization of subsurface hydrology and groundwater dynamic processes. Ground based methods, as electrical tomography, proved to obtain considerable resolution but they are difficult to extend to wider exploration purposes due to their logistical limitation. Methods that don't need electrical contact with soil can be, on the contrary, easily applied to broad areas. Among these methods, a rapidly growing role is played by frequency domain electro-magnetic (FDEM) survey. This is due thanks to the improvement of multi-frequency and multi-coils instrumentation, simple time-lapse repeatability, cheap and accurate topographical referencing, and the emerging development of inversion codes. From raw terrain apparent conductivity meter, FDEM survey is becoming a key tool for 3D soil characterization and dynamics observation in near surface hydrological studies. Dozens of papers are here summarized and presented, in order to describe the promising potential of the technique.

Teaching Quantum Uncertainty

ERIC Educational Resources Information Center

Hobson, Art

2011-01-01

An earlier paper introduces quantum physics by means of four experiments: Youngs double-slit interference experiment using (1) a light beam, (2) a low-intensity light beam with time-lapse photography, (3) an electron beam, and (4) a low-intensity electron beam with time-lapse photography. It's ironic that, although these experiments demonstrate…

Time-Lapse Joint Inversion of Cross-Well DC Resistivity and Seismic Data: A Numerical Investigation

EPA Science Inventory

Time-lapse joint inversion of geophysical data is required to image the evolution of oil reservoirs during production and enhanced oil recovery, CO2 sequestration, geothermal fields during production, and to monitor the evolution of contaminant plumes. Joint inversion schemes red...

Application of Machine Learning to Predict Dietary Lapses During Weight Loss.

PubMed

Goldstein, Stephanie P; Zhang, Fengqing; Thomas, John G; Butryn, Meghan L; Herbert, James D; Forman, Evan M

2018-05-01

Individuals who adhere to dietary guidelines provided during weight loss interventions tend to be more successful with weight control. Any deviation from dietary guidelines can be referred to as a "lapse." There is a growing body of research showing that lapses are predictable using a variety of physiological, environmental, and psychological indicators. With recent technological advancements, it may be possible to assess these triggers and predict dietary lapses in real time. The current study sought to use machine learning techniques to predict lapses and evaluate the utility of combining both group- and individual-level data to enhance lapse prediction. The current study trained and tested a machine learning algorithm capable of predicting dietary lapses from a behavioral weight loss program among adults with overweight/obesity (n = 12). Participants were asked to follow a weight control diet for 6 weeks and complete ecological momentary assessment (EMA; repeated brief surveys delivered via smartphone) regarding dietary lapses and relevant triggers. WEKA decision trees were used to predict lapses with an accuracy of 0.72 for the group of participants. However, generalization of the group algorithm to each individual was poor, and as such, group- and individual-level data were combined to improve prediction. The findings suggest that 4 weeks of individual data collection is recommended to attain optimal model performance. The predictive algorithm could be utilized to provide in-the-moment interventions to prevent dietary lapses and therefore enhance weight losses. Furthermore, methods in the current study could be translated to other types of health behavior lapses.

Time-lapse culture with morphokinetic embryo selection improves pregnancy and live birth chances and reduces early pregnancy loss: a meta-analysis.

PubMed

Pribenszky, Csaba; Nilselid, Anna-Maria; Montag, Markus

2017-11-01

Embryo evaluation and selection is fundamental in clinical IVF. Time-lapse follow-up of embryo development comprises undisturbed culture and the application of the visual information to support embryo evaluation. A meta-analysis of randomized controlled trials was carried out to study whether time-lapse monitoring with the prospective use of a morphokinetic algorithm for selection of embryos improves overall clinical outcome (pregnancy, early pregnancy loss, stillbirth and live birth rate) compared with embryo selection based on single time-point morphology in IVF cycles. The meta-analysis of five randomized controlled trials (n = 1637) showed that the application of time-lapse monitoring was associated with a significantly higher ongoing clinical pregnancy rate (51.0% versus 39.9%), with a pooled odds ratio of 1.542 (P < 0.001), significantly lower early pregnancy loss (15.3% versus 21.3%; OR: 0.662; P = 0.019) and a significantly increased live birth rate (44.2% versus 31.3%; OR 1.668; P = 0.009). Difference in stillbirth was not significant between groups (4.7% versus 2.4%). Quality of the evidence was moderate to low owing to inconsistencies across the studies. Selective application and variability were also limitations. Although time-lapse is shown to significantly improve overall clinical outcome, further high-quality evidence is needed before universal conclusions can be drawn. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Small scale characterization of vine plant root zone via 3D electrical resistivity tomography and Mise-à-la-Masse method: a case study in a Bordeaux Vineyard

NASA Astrophysics Data System (ADS)

Mary, Benjamin; Peruzzo, Luca; Boaga, Jacopo; Schmutz, Myriam; Wu, Yuxin; Hubbard, Susan S.; Cassiani, Giorgio

2017-04-01

Nowadays, best viticulture practices require the joint interpretation of climate and soils data. However, information about the soil structure and subsoil processes is often lacking, as point measurements, albeit precise, cannot ensure sufficient spatial coverage and resolution. Non-invasive methods can provide spatially extensive, high resolution information that, supported by traditional point-like data, help complete the complex picture of subsoil static and dynamic reality. So far very little emphasis has been given to investigating the role of soil properties and even less of roots activity on winegrapes. Vine plant's root systems play an important role in providing the minerals to the plants, but also control the water uptake and thus the water state of the vines, which is a key factor determining the grape quality potential. In this contribution we report about the measurements conducted since June 2016 in a vineyard near Bordeaux (France, Pessac Leognan Chateau). Two neighbor plants of different sizes have been selected. In order to spot small scale soil variations and root zone physical structure at the vicinity of the vine plants, we applied a methodology using longitudinal 2D tomography, 3D borehole-based electrical resistivity tomography and a variation of the mise-à-la-masse method (MALM) to assess the effect of plant roots on the current injection in the ground. Time-lapse measurements are particularly informative about the plant dynamics, and the focus is particularly applied on this approach. The time-lapse 3D ERT and MALM results are presented, and the potential to assimilate these data into a hydrological model that can account for the root water uptake as a function of atmospheric conditions is discussed.

Time-lapse 3-D electrical resistance tomography inversion for crosswell monitoring of dissolved and supercritical CO 2 flow at two field sites: Escatawpa and Cranfield, Mississippi, USA

DOE PAGES

Commer, Michael; Doetsch, Joseph; Dafflon, Baptiste; ...

2016-06-01

In this study, we advance the understanding of three-dimensional (3-D) electrical resistivity tomography (ERT) for monitoring long-term CO 2 storage by analyzing two previously published field time-lapse data sets. We address two important aspects of ERT inversion-the issue of resolution decay, a general impediment to the ERT method, and the issue of potentially misleading imaging artifacts due to 2-D model assumptions. The first study analyzes data from a shallow dissolved-CO 2 injection experiment near Escatawpa (Mississippi), where ERT data were collected in a 3-D crosswell configuration. Here, we apply a focusing approach designed for crosswell configurations to counteract resolution lossmore » in the inter-wellbore area, with synthetic studies demonstrating its effectiveness. The 3-D field data analysis reveals an initially southwards-trending flow path development and a dispersing plume development in the downgradient inter-well region. The second data set was collected during a deep (over 3 km) injection of supercritical CO 2 near Cranfield (Mississippi). Comparative 2-D and 3-D inversions reveal the projection of off-planar anomalies onto the cross-section, a typical artifact introduced by 2-D model assumptions. Conforming 3-D images from two different algorithms support earlier hydrological investigations, indicating a conduit system where flow velocity variations lead to a circumvention of a close observation well and an onset of increased CO 2 saturation downgradient from this well. We relate lateral permeability variations indicated by an independently obtained hydrological analysis to this consistently observed pattern in the CO 2 spatial plume evolution.« less

High-speed transport-of-intensity phase microscopy with an electrically tunable lens.

PubMed

Zuo, Chao; Chen, Qian; Qu, Weijuan; Asundi, Anand

2013-10-07

We present a high-speed transport-of-intensity equation (TIE) quantitative phase microscopy technique, named TL-TIE, by combining an electrically tunable lens with a conventional transmission microscope. This permits the specimen at different focus position to be imaged in rapid succession, with constant magnification and no physically moving parts. The simplified image stack collection significantly reduces the acquisition time, allows for the diffraction-limited through-focus intensity stack collection at 15 frames per second, making dynamic TIE phase imaging possible. The technique is demonstrated by profiling of microlens array using optimal frequency selection scheme, and time-lapse imaging of live breast cancer cells by inversion the defocused phase optical transfer function to correct the phase blurring in traditional TIE. Experimental results illustrate its outstanding capability of the technique for quantitative phase imaging, through a simple, non-interferometric, high-speed, high-resolution, and unwrapping-free approach with prosperous applications in micro-optics, life sciences and bio-photonics.

Measuring fast gene dynamics in single cells with time-lapse luminescence microscopy

PubMed Central

Mazo-Vargas, Anyimilehidi; Park, Heungwon; Aydin, Mert; Buchler, Nicolas E.

2014-01-01

Time-lapse fluorescence microscopy is an important tool for measuring in vivo gene dynamics in single cells. However, fluorescent proteins are limited by slow chromophore maturation times and the cellular autofluorescence or phototoxicity that arises from light excitation. An alternative is luciferase, an enzyme that emits photons and is active upon folding. The photon flux per luciferase is significantly lower than that for fluorescent proteins. Thus time-lapse luminescence microscopy has been successfully used to track gene dynamics only in larger organisms and for slower processes, for which more total photons can be collected in one exposure. Here we tested green, yellow, and red beetle luciferases and optimized substrate conditions for in vivo luminescence. By combining time-lapse luminescence microscopy with a microfluidic device, we tracked the dynamics of cell cycle genes in single yeast with subminute exposure times over many generations. Our method was faster and in cells with much smaller volumes than previous work. Fluorescence of an optimized reporter (Venus) lagged luminescence by 15–20 min, which is consistent with its known rate of chromophore maturation in yeast. Our work demonstrates that luciferases are better than fluorescent proteins at faithfully tracking the underlying gene expression. PMID:25232010

Titanium Surface Chemical Composition Interferes in the Pseudomonas aeruginosa Biofilm Formation.

PubMed

Nunes Filho, Antonio; Aires, Michelle de Medeiros; Braz, Danilo Cavalcante; Hinrichs, Ruth; Macedo, Alexandre José; Alves, Clodomiro

2018-02-01

Bacterial adhesion on three different surfaces: untreated Ti, plasma nitriding, and plasma carbonitriding Ti substrates were investigated. The samples were placed in bacterial cultures of Pseudomonas aeruginosa to assess biofilm formation. The correlation between the amount of bacteria attached to the surface after a lapse of time with nanotopography and physicochemical properties was performed. TiN showed the highest capacity to avoid bacterial adhesion, while presenting intermediate roughness and wettability. Although the surface of TiCN had the highest surface roughness and low contact angle (high wettability), bacterial adhesion was intermediate on this sample. Untreated Ti, even though presenting a smooth surface and low wettability, had the highest tendency to form biofilms. © 2018 International Center for Artificial Organs and Transplantation and Wiley Periodicals, Inc.

Triatomine Infestation in Guatemala: Spatial Assessment after Two Rounds of Vector Control

PubMed Central

Manne, Jennifer; Nakagawa, Jun; Yamagata, Yoichi; Goehler, Alexander; Brownstein, John S.; Castro, Marcia C.

2012-01-01

In 2000, the Guatemalan Ministry of Health initiated a Chagas disease program to control Rhodnius prolixus and Triatoma dimidiata by periodic house spraying with pyrethroid insecticides to characterize infestation patterns and analyze the contribution of programmatic practices to these patterns. Spatial infestation patterns at three time points were identified using the Getis-Ord Gi*(d) test. Logistic regression was used to assess predictors of reinfestation after pyrethroid insecticide administration. Spatial analysis showed high and low clusters of infestation at three time points. After two rounds of spray, 178 communities persistently fell in high infestation clusters. A time lapse between rounds of vector control greater than 6 months was associated with 1.54 (95% confidence interval = 1.07–2.23) times increased odds of reinfestation after first spray, whereas a time lapse of greater than 1 year was associated with 2.66 (95% confidence interval = 1.85–3.83) times increased odds of reinfestation after first spray compared with localities where the time lapse was less than 180 days. The time lapse between rounds of vector control should remain under 1 year. Spatial analysis can guide targeted vector control efforts by enabling tracking of reinfestation hotspots and improved targeting of resources. PMID:22403315

Geophysical Assessment of the Control of a Jetty on a Barrier Beach and Estuary System

NASA Astrophysics Data System (ADS)

Ulrich, C.; Hubbard, S.; Delaney, C.; Seymour, D.; Blom, K.; Black, W.

2013-12-01

An evaluation is underway at the Goat Rock State Beach, which is located at the mouth of the Russian River near Jenner, CA. The study focuses on quantifying the influence of a man made jetty on the functioning of a barrier beach and associated implications for estuary fish habitat and flood control. Flow through the beach results from water level differences between the estuary and the ocean. When the estuary is closed or perched, one of the potential major sources of outflow from the lagoon is seepage flow through the barrier beach. The location and design of the jetty could be altering subsurface flow paths through the jetty and possibly impeding or enhancing subsurface flow where the jetty is still intact. This will result in unnatural connectivity between the ocean and the estuary leading to atypical surface water elevations and possibly salinity imbalance. Results of the assessment will enable the Sonoma County Water Agency to understand how the jetty affects formation of the barrier beach and water surface elevations within the estuary. As one aspect of the evaluation, we are using geophysical methods to monitor seepage through the jetty as well as through the beach berm. We are using multiple surface geophysical methods, including: electrical resistivity, seismic refraction, ground penetrating radar, and electromagnetic methods. In general, seismic data are being used to characterize deeper bedrock controls on beach barrier functioning such as, channeling of estuarine water beneath the barrier beach. Electrical and electromagnetic methods are being used to characterize the beach sediment layers that could contribute to preferential flow paths during tide cycles in addition to preferential flow paths created by the jetty structure. Time-lapse electrical and electromagnetic data are being used to monitor moisture changes and mixing of saline and fresh water within the beach berm. Ground penetrating radar data are being used to delineate the geometry of the (often buried) jetty. All data are being integrated with topography, tidal and hydrological information, and electrical conductivity and temperature data from monitoring wells. These results are expected to improve the overall understanding of the jetty's effects on beach permeability and will better improve the understanding of the jetty's influence on estuary habitats and flood risk.

Vibrio cholerae use pili and flagella synergistically to effect motility switching and conditional surface attachment

NASA Astrophysics Data System (ADS)

Utada, Andrew S.; Bennett, Rachel R.; Fong, Jiunn C. N.; Gibiansky, Maxsim L.; Yildiz, Fitnat H.; Golestanian, Ramin; Wong, Gerard C. L.

2014-09-01

We show that Vibrio cholerae, the causative agent of cholera, use their flagella and mannose-sensitive hemagglutinin (MSHA) type IV pili synergistically to switch between two complementary motility states that together facilitate surface selection and attachment. Flagellar rotation counter-rotates the cell body, causing MSHA pili to have periodic mechanical contact with the surface for surface-skimming cells. Using tracking algorithms at 5 ms resolution we observe two motility behaviours: ‘roaming', characterized by meandering trajectories, and ‘orbiting’, characterized by repetitive high-curvature orbits. We develop a hydrodynamic model showing that these phenotypes result from a nonlinear relationship between trajectory shape and frictional forces between pili and the surface: strong pili-surface interactions generate orbiting motion, increasing the local bacterial loiter time. Time-lapse imaging reveals how only orbiting mode cells can attach irreversibly and form microcolonies. These observations suggest that MSHA pili are crucial for surface selection, irreversible attachment, and ultimately microcolony formation.

Monitoring channel head erosion processes in response to an artificially induced abrupt base level change using time-lapse photography

NASA Astrophysics Data System (ADS)

Nichols, M. H.; Nearing, M.; Hernandez, M.; Polyakov, V. O.

2016-07-01

Gullies that terminate at a vertical-wall are ubiquitous throughout arid and semiarid regions. Multi-year assessments of gully evolution and headcut advance are typically accomplished using traditional ground surveys and aerial photographs, with much recent research focused on integrating data collected at very high spatial resolutions using new techniques such as aerial surveys with blimps or kites and ground surveys with LiDar scanners. However, knowledge of specific processes that drive headcut advance is limited due to inadequate observation and documentation of flash floods and subsequent erosion that can occur at temporal resolutions not captured through repeat surveys. This paper presents a method for using very-high temporal resolution ground-based time-lapse photography to capture short-duration flash floods and gully head evolution in response. In 2004, a base level controlling concrete weir was removed from the outlet of a 1.29 ha semiarid headwater drainage on the Walnut Gulch Experimental Watershed in southeastern Arizona, USA. During the ten year period from 2004 to 2014 the headcut migrated upchannel a total of 14.5 m reducing the contributing area at the headwall by 9.5%. Beginning in July 2012, time-lapse photography was employed to observe event scale channel evolution dynamics. The most frequent erosion processes observed during three seasons of time-lapse photography were plunge pool erosion and mass wasting through sidewall or channel headwall slumping that occurred during summer months. Geomorphic change during the ten year period was dominated by a single piping event in August 2014 that advanced the channel head 7.4 m (51% of the overall advance) and removed 11.3 m3 of sediment. High temporal resolution time-lapse photography was critical for identifying subsurface erosion processes, in the absence of time-lapse images piping would not have been identified as an erosion mechanism responsible for advancing the gully headwall at this site.

Geophysical Signitures From Hydrocarbon Contaminated Aquifers

NASA Astrophysics Data System (ADS)

Abbas, M.; Jardani, A.

2015-12-01

The task of delineating the contamination plumes as well as studying their impact on the soil and groundwater biogeochemical properties is needed to support the remediation efforts and plans. Geophysical methods including electrical resistivity tomography (ERT), induced polarization (IP), ground penetrating radar (GPR), and self-potential (SP) have been previously used to characterize contaminant plumes and investigate their impact on soil and groundwater properties (Atekwana et al., 2002, 2004; Benson et al., 1997; Campbell et al., 1996; Cassidy et al., 2001; Revil et al., 2003; Werkema et al., 2000). Our objective was to: estimate the hydrocarbon contamination extent in a contaminated site in northern France, and to adverse the effects of the oil spill on the groundwater properties. We aim to find a good combination of non-intrusive and low cost methods which we can use to follow the bio-remediation process, which is planned to proceed next year. We used four geophysical methods including electrical resistivity tomography, IP, GPR, and SP. The geophysical data was compared to geochemical ones obtained from 30 boreholes installed in the site during the geophysical surveys. Our results have shown: low electrical resistivity values; high chargeability values; negative SP anomalies; and attenuated GPR reflections coincident with groundwater contamination. Laboratory and field geochemical measurements have demonstrated increased groundwater electrical conductivity and increased microbial activity associated with hydrocarbon contamination of groundwater. Our study results support the conductive model suggested by studies such as Sauck (2000) and Atekwana et al., (2004), who suggest that biological alterations of hydrocarbon contamination can substantially modify the chemical and physical properties of the subsurface, producing a dramatic shift in the geo-electrical signature from resistive to conductive. The next stage of the research will include time lapse borehole and 3D geophysical measurements coupled to biological and chemical surface phase experiments in order to monitor the bioremediation processes.

A Rapid One-Step Process for Fabrication of Biomimetic Superhydrophobic Surfaces by Pulse Electrodeposition.

PubMed

Jiang, Shuzhen; Guo, Zhongning; Liu, Guixian; Gyimah, Glenn Kwabena; Li, Xiaoying; Dong, Hanshan

2017-10-25

Inspired by some typical plants such as lotus leaves, superhydrophobic surfaces are commonly prepared by a combination of low surface energy materials and hierarchical micro/nano structures. In this work, superhydrophobic surfaces on copper substrates were prepared by a rapid, facile one-step pulse electrodepositing process, with different duty ratios in an electrolyte containing lanthanum chloride (LaCl₃·6H₂O), myristic acid (CH₃(CH₂) 12 COOH), and ethanol. The equivalent electrolytic time was only 10 min. The surface morphology, chemical composition and superhydrophobic property of the pulse electrodeposited surfaces were fully investigated with SEM, EDX, XRD, contact angle meter and time-lapse photographs of water droplets bouncing method. The results show that the as-prepared surfaces have micro/nano dual scale structures mainly consisting of La[CH₃(CH₂) 12 COO]₃ crystals. The maximum water contact angle (WCA) is about 160.9°, and the corresponding sliding angle is about 5°. This method is time-saving and can be easily extended to other conductive materials, having a great potential for future applications.

A Rapid One-Step Process for Fabrication of Biomimetic Superhydrophobic Surfaces by Pulse Electrodeposition

PubMed Central

Jiang, Shuzhen; Guo, Zhongning; Liu, Guixian; Gyimah, Glenn Kwabena; Li, Xiaoying; Dong, Hanshan

2017-01-01

Inspired by some typical plants such as lotus leaves, superhydrophobic surfaces are commonly prepared by a combination of low surface energy materials and hierarchical micro/nano structures. In this work, superhydrophobic surfaces on copper substrates were prepared by a rapid, facile one-step pulse electrodepositing process, with different duty ratios in an electrolyte containing lanthanum chloride (LaCl3·6H2O), myristic acid (CH3(CH2)12COOH), and ethanol. The equivalent electrolytic time was only 10 min. The surface morphology, chemical composition and superhydrophobic property of the pulse electrodeposited surfaces were fully investigated with SEM, EDX, XRD, contact angle meter and time-lapse photographs of water droplets bouncing method. The results show that the as-prepared surfaces have micro/nano dual scale structures mainly consisting of La[CH3(CH2)12COO]3 crystals. The maximum water contact angle (WCA) is about 160.9°, and the corresponding sliding angle is about 5°. This method is time-saving and can be easily extended to other conductive materials, having a great potential for future applications. PMID:29068427

Assessing Uncertainty and Repeatability in Time-Lapse VSP Monitoring of CO2 Injection in a Brine Aquifer, Frio Formation, Texas (A Case Study)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nazari, Siamak; Daley, Thomas M.

2013-02-07

This study was done to assess the repeatability and uncertainty of time-lapse VSP response to CO 2 injection in the Frio formation near Houston Texas. A work flow was built to assess the effect of time-lapse injected CO 2 into two Frio brine reservoir intervals, the ‘C’ sand (Frio1) and the ‘Blue sand’ (Frio2). The time-lapse seismic amplitude variations with sensor depth for both reservoirs Frio1 and Frio2 were computed by subtracting the seismic response of the base survey from each of the two monitor seismic surveys. Source site 1 has been considered as one of the best sites formore » evaluating the time-lapse response after injection. For site 1, the computed timelapse NRMS levels after processing had been compared to the estimated time-lapse NRMS level before processing for different control reflectors, and for brine aquifers Frio1, and Frio2 to quantify detectability of amplitude difference. As the main interest is to analyze the time-lapse amplitude variations, different scenarios have been considered. Three different survey scenarios were considered: the base survey which was performed before injection, monitor1 performed after the first injection operation, and monitor2 which was after the second injection. The first scenario was base-monitor1, the second was basemonitor2, and the third was monitor1-monitor2. We considered three ‘control’ reflections above the Frio to assist removal of overburden changes, and concluded that third control reflector (CR3) is the most favorable for the first scenario in terms of NRMS response, and first control reflector (CR1) is the most favorable for the second and third scenarios in terms of NRMS response. The NRMS parameter is shown to be a useful measure to assess the effect of processing on time-lapse data. The overall NRMS for the Frio VSP data set was found to be in the range of 30% to 80% following basic processing. This could be considered as an estimated baseline in assessing the utility of VSP for CO 2 monitoring. This study shows that the CO 2 injection in brine reservoir Frio1 (the ‘C’ sand unit) does induce a relative change in amplitude response, and for Frio2 (the ‘Blue’ sand unit) an amplitude change has been also detected, but in both cases the uncertainty, as measured by NRMS indicates the reservoir changes are, at best, only slightly above the noise level, and often below the noise level of the overall data set.« less

Inter-laboratory agreement on embryo classification and clinical decision: Conventional morphological assessment vs. time lapse.

PubMed

Martínez-Granados, Luis; Serrano, María; González-Utor, Antonio; Ortíz, Nereyda; Badajoz, Vicente; Olaya, Enrique; Prados, Nicolás; Boada, Montse; Castilla, Jose A

2017-01-01

The aim of this study is to determine inter-laboratory variability on embryo assessment using time-lapse platform and conventional morphological assessment. This study compares the data obtained from a pilot study of external quality control (EQC) of time lapse, performed in 2014, with the classical EQC of the Spanish Society for the Study of Reproductive Biology (ASEBIR) performed in 2013 and 2014. In total, 24 laboratories (8 using EmbryoScope™, 15 using Primo Vision™ and one with both platforms) took part in the pilot study. The clinics that used EmbryoScope™ analysed 31 embryos and those using Primo Vision™ analysed 35. The classical EQC was implemented by 39 clinics, based on an analysis of 25 embryos per year. Both groups were required to evaluate various qualitative morphological variables (cell fragmentation, the presence of vacuoles, blastomere asymmetry and multinucleation), to classify the embryos in accordance with ASEBIR criteria and to stipulate the clinical decision taken. In the EQC time-lapse pilot study, the groups were asked to determine, as well as the above characteristics, the embryo development times, the number, opposition and size of pronuclei, the direct division of 1 into 3 cells and/or of 3 into 5 cells and false divisions. The degree of agreement was determined by calculating the intra-class correlation coefficients and the coefficient of variation for the quantitative variables and the Gwet index for the qualitative variables. For both EmbryoScope™ and Primo Vision™, two periods of greater inter-laboratory variability were observed in the times of embryo development events. One peak of variability was recorded among the laboratories addressing the first embryo events (extrusion of the second polar body and the appearance of pronuclei); the second peak took place between the times corresponding to the 8-cell and morula stages. In most of the qualitative variables analysed regarding embryo development, there was almost-perfect inter-laboratory agreement among conventional morphological assessment (CMA), EmbryoScope™ and Primo Vision™, except for false divisions, vacuoles and asymmetry (users of all methods) and multinucleation (users of Primo Vision™), where the degree of agreement was lower. The inter-laboratory agreement on embryo classification according to the ASEBIR criteria was moderate-substantial (Gwet 0.41-0.80) for the laboratories using CMA and EmbryoScope™, and fair-moderate (Gwet 0.21-0.60) for those using Primo Vision™. The inter-laboratory agreement for clinical decision was moderate (Gwet 0.41-0.60) on day 5 for CMA users and almost perfect (Gwet 0.81-1) for time-lapse users. In conclusion, time-lapse technology does not improve inter-laboratory agreement on embryo classification or the analysis of each morphological variable. Moreover, depending on the time-lapse platform used, inter-laboratory agreement may be lower than that obtained by CMA. However, inter-laboratory agreement on clinical decisions is improved with the use of time lapse, regardless of the platform used.

Inter-laboratory agreement on embryo classification and clinical decision: Conventional morphological assessment vs. time lapse

PubMed Central

Serrano, María; González-Utor, Antonio; Ortíz, Nereyda; Badajoz, Vicente; Olaya, Enrique; Prados, Nicolás; Boada, Montse; Castilla, Jose A.

2017-01-01

The aim of this study is to determine inter-laboratory variability on embryo assessment using time-lapse platform and conventional morphological assessment. This study compares the data obtained from a pilot study of external quality control (EQC) of time lapse, performed in 2014, with the classical EQC of the Spanish Society for the Study of Reproductive Biology (ASEBIR) performed in 2013 and 2014. In total, 24 laboratories (8 using EmbryoScope™, 15 using Primo Vision™ and one with both platforms) took part in the pilot study. The clinics that used EmbryoScope™ analysed 31 embryos and those using Primo Vision™ analysed 35. The classical EQC was implemented by 39 clinics, based on an analysis of 25 embryos per year. Both groups were required to evaluate various qualitative morphological variables (cell fragmentation, the presence of vacuoles, blastomere asymmetry and multinucleation), to classify the embryos in accordance with ASEBIR criteria and to stipulate the clinical decision taken. In the EQC time-lapse pilot study, the groups were asked to determine, as well as the above characteristics, the embryo development times, the number, opposition and size of pronuclei, the direct division of 1 into 3 cells and/or of 3 into 5 cells and false divisions. The degree of agreement was determined by calculating the intra-class correlation coefficients and the coefficient of variation for the quantitative variables and the Gwet index for the qualitative variables. For both EmbryoScope™ and Primo Vision™, two periods of greater inter-laboratory variability were observed in the times of embryo development events. One peak of variability was recorded among the laboratories addressing the first embryo events (extrusion of the second polar body and the appearance of pronuclei); the second peak took place between the times corresponding to the 8-cell and morula stages. In most of the qualitative variables analysed regarding embryo development, there was almost-perfect inter-laboratory agreement among conventional morphological assessment (CMA), EmbryoScope™ and Primo Vision™, except for false divisions, vacuoles and asymmetry (users of all methods) and multinucleation (users of Primo Vision™), where the degree of agreement was lower. The inter-laboratory agreement on embryo classification according to the ASEBIR criteria was moderate-substantial (Gwet 0.41–0.80) for the laboratories using CMA and EmbryoScope™, and fair-moderate (Gwet 0.21–0.60) for those using Primo Vision™. The inter-laboratory agreement for clinical decision was moderate (Gwet 0.41–0.60) on day 5 for CMA users and almost perfect (Gwet 0.81–1) for time-lapse users. In conclusion, time-lapse technology does not improve inter-laboratory agreement on embryo classification or the analysis of each morphological variable. Moreover, depending on the time-lapse platform used, inter-laboratory agreement may be lower than that obtained by CMA. However, inter-laboratory agreement on clinical decisions is improved with the use of time lapse, regardless of the platform used. PMID:28841654

New Marshall Center Test Stand 4697 Construction Time-Lapse

NASA Image and Video Library

2016-09-27

In less than two minutes watch structural Test Stand 4697 rise at NASA's Marshall Space Flight Center from the start of construction in May 2014 to the end of the stand's construction phase in September 2016. The stand will subject the 196,000-gallon liquid oxygen tank of the Space Launch System's massive core stage to the same stresses and pressures it must endure at launch and in flight. Now, Marshall teams are installing sophisticated fluid transfer and pressurization systems, hydraulic controls, electrical control and data systems, fiber optics cables and special test equipment to prepare for the arrival of the test tank in 2017. (NASA/MSFC/David Olive)

In Vivo Analysis of the Neurovascular Niche in the Developing Xenopus Brain

PubMed Central

Li, Jianli

2017-01-01

Abstract The neurovascular niche is a specialized microenvironment formed by the interactions between neural progenitor cells (NPCs) and the vasculature. While it is thought to regulate adult neurogenesis by signaling through vascular-derived soluble cues or contacted-mediated cues, less is known about the neurovascular niche during development. In Xenopus laevis tadpole brain, NPCs line the ventricle and extend radial processes tipped with endfeet to the vascularized pial surface. Using in vivo labeling and time-lapse imaging in tadpoles, we find that intracardial injection of fluorescent tracers rapidly labels Sox2/3-expressing NPCs and that vascular-circulating molecules are endocytosed by NPC endfeet. Confocal imaging indicates that about half of the endfeet appear to appose the vasculature, and time-lapse analysis of NPC proliferation and endfeet-vascular interactions suggest that proliferative activity does not correlate with stable vascular apposition. Together, these findings characterize the neurovascular niche in the developing brain and suggest that, while signaling to NPCs may occur through vascular-derived soluble cues, stable contact between NPC endfeet and the vasculature is not required for developmental neurogenesis. PMID:28795134

Sit still and pay attention: Using the Wii Balance-Board to detect lapses in concentration in children during psychophysical testing.

PubMed

Jones, Pete R

2018-05-16

During psychophysical testing, a loss of concentration can cause observers to answer incorrectly, even when the stimulus is clearly perceptible. Such lapses limit the accuracy and speed of many psychophysical measurements. This study evaluates an automated technique for detecting lapses based on body movement (postural instability). Thirty-five children (8-11 years of age) and 34 adults performed a typical psychophysical task (orientation discrimination) while seated on a Wii Fit Balance Board: a gaming device that measures center of pressure (CoP). Incorrect responses on suprathreshold catch trials provided the "reference standard" measure of when lapses in concentration occurred. Children exhibited significantly greater variability in CoP on lapse trials, indicating that postural instability provides a feasible, real-time index of concentration. Limitations and potential applications of this method are discussed.

Sources of Intermodel Spread in the Lapse Rate and Water Vapor Feedbacks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Po-Chedley, Stephen; Armour, Kyle C.; Bitz, Cecilia M.

Sources of intermodel differences in the global lapse rate (LR) and water vapor (WV) feedbacks are assessed using CO 2 forcing simulations from 28 general circulation models. Tropical surface warming leads to significant warming and moistening in the tropical and extratropical upper troposphere, signifying a nonlocal, tropical influence on extratropical radiation and feedbacks. Model spread in the locally defined LR and WV feedbacks is pronounced in the Southern Ocean because of large-scale ocean upwelling, which reduces surface warming and decouples the surface from the tropospheric response. The magnitude of local extratropical feedbacks across models and over time is well characterizedmore » using the ratio of tropical to extratropical surface warming. It is shown that model differences in locally defined LR and WV feedbacks, particularly over the southern extratropics, drive model variability in the global feedbacks. The cross-model correlation between the global LR and WV feedbacks therefore does not arise from their covariation in the tropics, but rather from the pattern of warming exerting a common control on extratropical feedback responses. Because local feedbacks over the Southern Hemisphere are an important contributor to the global feedback, the partitioning of surface warming between the tropics and the southern extratropics is a key determinant of the spread in the global LR and WV feedbacks. It is also shown that model Antarctic sea ice climatology influences sea ice area changes and southern extratropical surface warming. In conclusion, as a result, model discrepancies in climatological Antarctic sea ice area have a significant impact on the intermodel spread of the global LR and WV feedbacks.« less

Sources of Intermodel Spread in the Lapse Rate and Water Vapor Feedbacks

DOE PAGES

Po-Chedley, Stephen; Armour, Kyle C.; Bitz, Cecilia M.; ...

2018-03-23

Sources of intermodel differences in the global lapse rate (LR) and water vapor (WV) feedbacks are assessed using CO 2 forcing simulations from 28 general circulation models. Tropical surface warming leads to significant warming and moistening in the tropical and extratropical upper troposphere, signifying a nonlocal, tropical influence on extratropical radiation and feedbacks. Model spread in the locally defined LR and WV feedbacks is pronounced in the Southern Ocean because of large-scale ocean upwelling, which reduces surface warming and decouples the surface from the tropospheric response. The magnitude of local extratropical feedbacks across models and over time is well characterizedmore » using the ratio of tropical to extratropical surface warming. It is shown that model differences in locally defined LR and WV feedbacks, particularly over the southern extratropics, drive model variability in the global feedbacks. The cross-model correlation between the global LR and WV feedbacks therefore does not arise from their covariation in the tropics, but rather from the pattern of warming exerting a common control on extratropical feedback responses. Because local feedbacks over the Southern Hemisphere are an important contributor to the global feedback, the partitioning of surface warming between the tropics and the southern extratropics is a key determinant of the spread in the global LR and WV feedbacks. It is also shown that model Antarctic sea ice climatology influences sea ice area changes and southern extratropical surface warming. In conclusion, as a result, model discrepancies in climatological Antarctic sea ice area have a significant impact on the intermodel spread of the global LR and WV feedbacks.« less

Surface tension and modeling of cellular intercalation during zebrafish gastrulation.

PubMed

Calmelet, Colette; Sepich, Diane

2010-04-01

In this paper we discuss a model of zebrafish embryo notochord development based on the effect of surface tension of cells at the boundaries. We study the process of interaction of mesodermal cells at the boundaries due to adhesion and cortical tension, resulting in cellular intercalation. From in vivo experiments, we obtain cell outlines of time-lapse images of cell movements during zebrafish embryo development. Using Cellular Potts Model, we calculate the total surface energy of the system of cells at different time intervals at cell contacts. We analyze the variations of total energy depending on nature of cell contacts. We demonstrate that our model can be viable by calculating the total surface energy value for experimentally observed configurations of cells and showing that in our model these configurations correspond to a decrease in total energy values in both two and three dimensions.

Time-Lapse Motion Picture Technique Applied to the Study of Geological Processes.

PubMed

Miller, R D; Crandell, D R

1959-09-25

Light-weight, battery-operated timers were built and coupled to 16-mm motion-picture cameras having apertures controlled by photoelectric cells. The cameras were placed adjacent to Emmons Glacier on Mount Rainier. The film obtained confirms the view that exterior time-lapse photography can be applied to the study of slow-acting geologic processes.

TLM-Tracker: software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies.

PubMed

Klein, Johannes; Leupold, Stefan; Biegler, Ilona; Biedendieck, Rebekka; Münch, Richard; Jahn, Dieter

2012-09-01

Time-lapse imaging in combination with fluorescence microscopy techniques enable the investigation of gene regulatory circuits and uncovered phenomena like culture heterogeneity. In this context, computational image processing for the analysis of single cell behaviour plays an increasing role in systems biology and mathematical modelling approaches. Consequently, we developed a software package with graphical user interface for the analysis of single bacterial cell behaviour. A new software called TLM-Tracker allows for the flexible and user-friendly interpretation for the segmentation, tracking and lineage analysis of microbial cells in time-lapse movies. The software package, including manual, tutorial video and examples, is available as Matlab code or executable binaries at http://www.tlmtracker.tu-bs.de.

The 2011 collapse of Puu Oo pit crater, Hawaii: insights from digital image correlation and Discrete Element Method models

NASA Astrophysics Data System (ADS)

Holohan, E. P.; Walter, T. R.; Schöpfer, M. P. J.; Walsh, J. J.; Orr, T.; Poland, M.

2012-04-01

In March 2011, a spectacular fissure eruption on Kilauea was associated with a major collapse event in the highly-active Puu Oo crater. Time-lapse cameras maintained by the Hawaii Volcano Observatory captured views of the crater in the moments before, during, and after the collapse. The 2011 event hence represents a unique opportunity to characterize the surface deformation related to the onset of a pit crater collapse and to understand what factors influence it. To do so, we used two approaches. First, we analyzed the available series of camera images by means of digital image correlation techniques. This enabled us to gain a semi-quantitative (pixel-unit) description of the surface displacements and the structural development of the collapsing crater floor. Secondly, we ran a series of 'true-scale' numerical pit-crater collapse simulations based on the two-dimensional Distinct Element Method (2D-DEM). This enabled us to gain insights into what geometric and mechanical factors could have controlled the observed surface displacement pattern and structural development. Our analysis of the time-lapse images reveals that the crater floor initially gently sagged, and then rapidly collapsed in association with the appearance of a large ring-like fault scarp. The observed structural development and surface displacement patterns of the March 2011 Puu Oo collapse are best reproduced in DEM models with a relatively shallow magma reservoir that is vertically elongated, and with a crater floor rock mass that is reasonably strong. In combining digital image correlation with DEM modeling, our study highlights the future potential of these relatively new techniques for understanding physical processes at active volcanoes.

Temporal and spatial coordination of chromosome movement, spindle formation, and nuclear envelope breakdown during prometaphase in Drosophila melanogaster embryos.

PubMed

Hiraoka, Y; Agard, D A; Sedat, J W

1990-12-01

The spatial and temporal dynamics of diploid chromosome organization, microtubule arrangement, and the state of the nuclear envelope have been analyzed in syncytial blastoderm embryos of Drosophila melanogaster during the transition from prophase to metaphase, by three-dimensional optical sectioning microscopy. Time-lapse, three-dimensional data recorded in living embryos revealed that congression of chromosomes (the process whereby chromosomes move to form the metaphase plate) at prometaphase occurs as a wave, starting at the top of the nucleus near the embryo surface and proceeding through the nucleus to the bottom. The time-lapse analysis was augmented by a high-resolution analysis of fixed embryos where it was possible to unambiguously trace the three-dimensional paths of individual chromosomes. In prophase, the centromeres were found to be clustered at the top of the nucleus while the telomeres were situated at the bottom of the nucleus or towards the embryo interior. This polarized centromere-telomere orientation, perpendicular to the embryo surface, was preserved during the process of prometaphase chromosome congression. Correspondingly, breakdown of the nuclear envelope started at the top of the nucleus with the mitotic spindle being formed at the positions of the partial breakdown of the nuclear envelope. Our observation provide an example in which nuclear structures are spatially organized and their functions are locally and coordinately controlled in three dimensions.

A new model for the spectral induced polarization signature of bacterial growth in porous media

NASA Astrophysics Data System (ADS)

Revil, A.; Atekwana, E.; Zhang, C.; Jardani, A.; Smith, S.

2012-09-01

The complex conductivity of porous materials and colloidal suspensions comprises two components: an in-phase conductivity associated with electromigration of the charge carriers and a quadrature conductivity associated with the reversible storage of the charges at some polarization length scales. We developed a quantitative model to investigate the frequency domain induced polarization response of suspensions of bacteria and bacteria growth in porous media. Induced polarization of bacteria (α polarization) is related to the properties of the electrical double layer of the bacteria. Surface conductivity and α polarization are due to the Stern layer of counterions occurring in a brush of polymers coating the surface of the bacteria. These phenomena can be related to their cation exchange capacity. The mobility of the counterions in this Stern layer is found to be very small (4.7 × 10-10 m2 s-1 V-1 at 25°C). This implies a very low relaxation frequency for the αpolarization of the bacteria cells (typically around 0.1-5 Hz), in agreement with experimental observations. This new model can be coupled to reactive transport modeling codes in which the evolution of bacterial populations are usually described by Monod kinetics. We show that the growth rate and endogenous decay coefficients of bacteria in a porous sand can be inferred nonintrusively from time-lapse frequency domain induced polarization data.

A Versatile Time-Lapse Camera System Developed by the Hawaiian Volcano Observatory for Use at Kilauea Volcano, Hawaii

USGS Publications Warehouse

Orr, Tim R.; Hoblitt, Richard P.

2008-01-01

Volcanoes can be difficult to study up close. Because it may be days, weeks, or even years between important events, direct observation is often impractical. In addition, volcanoes are often inaccessible due to their remote location and (or) harsh environmental conditions. An eruption adds another level of complexity to what already may be a difficult and dangerous situation. For these reasons, scientists at the U.S. Geological Survey (USGS) Hawaiian Volcano Observatory (HVO) have, for years, built camera systems to act as surrogate eyes. With the recent advances in digital-camera technology, these eyes are rapidly improving. One type of photographic monitoring involves the use of near-real-time network-enabled cameras installed at permanent sites (Hoblitt and others, in press). Time-lapse camera-systems, on the other hand, provide an inexpensive, easily transportable monitoring option that offers more versatility in site location. While time-lapse systems lack near-real-time capability, they provide higher image resolution and can be rapidly deployed in areas where the use of sophisticated telemetry required by the networked cameras systems is not practical. This report describes the latest generation (as of 2008) time-lapse camera system used by HVO for photograph acquisition in remote and hazardous sites on Kilauea Volcano.

Time-Lapse Micro-Tomography Measurements and Determination of Effective Transport Properties of Snow Metamorphism Under Advective Conditions

NASA Astrophysics Data System (ADS)

Ebner, P. P.; Grimm, S.; Steen-Larsen, H. C.; Schneebeli, M.; Steinfeld, A.

2014-12-01

The metamorphism of snow under advective air flow, with and without temperature gradient, was never experimentally investigated. We developed a new sample holder where metamorphism under advective conditions can be observed and measured using time-lapse micro-tomography [1]. Long-term experiments were performed and direct pore-level simulation (DPLS) [2,3] was directly applied on the extracted 3D digital geometry of the snow to calculate the effective transport properties by solving the governing fluid flow equations. The results showed no effect of isothermal advection, compared to rates typical for isothermal metamorphism. Appling a temperature gradient, the results showed increased snow metamorphism compared to rates typical for temperature gradient metamorphism. However, for both cases a change in the isotopic composition in the air as well as in the snow sample could be observed. These measurements could be influential to better understand snow-air exchange processes relevant for atmospheric chemistry and isotopic composition. REFERENCES[1] Ebner P. P., Grimm S., Schneebeli M., and Steinfeld A.: An instrumented sample holder for time-lapse micro-tomography measurements of snow under advective airflow. Geoscientific Instrumentation, Methods and Data Systems 4(2014), 353-373. [2] Zermatten E., Haussener S., Schneebeli M., and Steinfeld A.: Tomography-based determination of permeability and Dupuit-Forchheimer coefficient of characteristic snow samples. Journal of Glaciology 57(2011), 811-816. [3] Zermatten E., Schneebeli M., Arakawa H., and Steinfeld A.: Tomography-based determination of porosity, specific area and permeability of snow and comparison with measurements. Cold Regions Science and Technology 97 (2014), 33-40. Fig. 1: 3-D surface rendering of a refrozen wet snow sample with fluid flow streamline.

Things Forgotten: Simple Lapse or Serious Problem?

MedlinePlus

... part of the U.S. Department of Health and Human Services Search form Search ... went there. And misplaced your keys or eyeglasses at least a few times. Many people worry about these memory lapses. They fear they’re heading toward a ...

Time-lapse joint AVO inversion using generalized linear method based on exact Zoeppritz equations

NASA Astrophysics Data System (ADS)

Zhi, Longxiao; Gu, Hanming

2018-03-01

The conventional method of time-lapse AVO (Amplitude Versus Offset) inversion is mainly based on the approximate expression of Zoeppritz equations. Though the approximate expression is concise and convenient to use, it has certain limitations. For example, its application condition is that the difference of elastic parameters between the upper medium and lower medium is little and the incident angle is small. In addition, the inversion of density is not stable. Therefore, we develop the method of time-lapse joint AVO inversion based on exact Zoeppritz equations. In this method, we apply exact Zoeppritz equations to calculate the reflection coefficient of PP wave. And in the construction of objective function for inversion, we use Taylor series expansion to linearize the inversion problem. Through the joint AVO inversion of seismic data in baseline survey and monitor survey, we can obtain the P-wave velocity, S-wave velocity, density in baseline survey and their time-lapse changes simultaneously. We can also estimate the oil saturation change according to inversion results. Compared with the time-lapse difference inversion, the joint inversion doesn't need certain assumptions and can estimate more parameters simultaneously. It has a better applicability. Meanwhile, by using the generalized linear method, the inversion is easily implemented and its calculation cost is small. We use the theoretical model to generate synthetic seismic records to test and analyze the influence of random noise. The results can prove the availability and anti-noise-interference ability of our method. We also apply the inversion to actual field data and prove the feasibility of our method in actual situation.

Unscented Kalman filter assimilation of time-lapse self-potential data for monitoring solute transport

NASA Astrophysics Data System (ADS)

Cui, Yi-an; Liu, Lanbo; Zhu, Xiaoxiong

2017-08-01

Monitoring the extent and evolution of contaminant plumes in local and regional groundwater systems from existing landfills is critical in contamination control and remediation. The self-potential survey is an efficient and economical nondestructive geophysical technique that can be used to investigate underground contaminant plumes. Based on the unscented transform, we have built a Kalman filtering cycle to conduct time-lapse data assimilation for monitoring the transport of solute based on the solute transport experiment using a bench-scale physical model. The data assimilation was formed by modeling the evolution based on the random walk model and observation correcting based on the self-potential forward. Thus, monitoring self-potential data can be inverted by the data assimilation technique. As a result, we can reconstruct the dynamic process of the contaminant plume instead of using traditional frame-to-frame static inversion, which may cause inversion artifacts. The data assimilation inversion algorithm was evaluated through noise-added synthetic time-lapse self-potential data. The result of the numerical experiment shows validity, accuracy and tolerance to the noise of the dynamic inversion. To validate the proposed algorithm, we conducted a scaled-down sandbox self-potential observation experiment to generate time-lapse data that closely mimics the real-world contaminant monitoring setup. The results of physical experiments support the idea that the data assimilation method is a potentially useful approach for characterizing the transport of contamination plumes using the unscented Kalman filter (UKF) data assimilation technique applied to field time-lapse self-potential data.

Inversion of time-domain induced polarization data based on time-lapse concept

NASA Astrophysics Data System (ADS)

Kim, Bitnarae; Nam, Myung Jin; Kim, Hee Joon

2018-05-01

Induced polarization (IP) surveys, measuring overvoltage phenomena of the medium, are widely and increasingly performed not only for exploration of mineral resources but also for engineering applications. Among several IP survey methods such as time-domain, frequency-domain and spectral IP surveys, this study introduces a noble inversion method for time-domain IP data to recover the chargeability structure of target medium. The inversion method employs the concept of 4D inversion of time-lapse resistivity data sets, considering the fact that measured voltage in time-domain IP survey is distorted by IP effects to increase from the instantaneous voltage measured at the moment the source current injection starts. Even though the increase is saturated very fast, we can consider the saturated and instantaneous voltages as a time-lapse data set. The 4D inversion method is one of the most powerful method for inverting time-lapse resistivity data sets. Using the developed IP inversion algorithm, we invert not only synthetic but also field IP data to show the effectiveness of the proposed method by comparing the recovered chargeability models with those from linear inversion that was used for the inversion of the field data in a previous study. Numerical results confirm that the proposed inversion method generates reliable chargeability models even though the anomalous bodies have large IP effects.

Application of RVA and Time-Lapse Photography to Explore Effects of Extent of Chlorination, Milling Extraction Rate, and Particle-Size Reduction of Flour on Cake-Baking Functionality

USDA-ARS?s Scientific Manuscript database

Three factors (extent of chlorination, milling extraction rate and particle-size reduction) in the cake-bakeing functionality of Croplan 594W flour were explored by Rapid Visco-Analyzer (RVA) and time-lapse photography. The extent of chlorination and milling extraction rate showed dramatic effects,...

Monitoring channel head erosion processes in response to an artificially induced abrupt base level change using time-lapse photography 2301

USDA-ARS?s Scientific Manuscript database

Headcut and channel extension in response to an abrupt base level change in 2004 of approximately 1m was studied in a 1.29 ha semiarid headwater drainage on the Walnut Gulch Experimental Watershed (WGEW) in southeastern Arizona, USA. Field observations and time-lapse photography were coupled with hy...

Unsupervised automated high throughput phenotyping of RNAi time-lapse movies.

PubMed

Failmezger, Henrik; Fröhlich, Holger; Tresch, Achim

2013-10-04

Gene perturbation experiments in combination with fluorescence time-lapse cell imaging are a powerful tool in reverse genetics. High content applications require tools for the automated processing of the large amounts of data. These tools include in general several image processing steps, the extraction of morphological descriptors, and the grouping of cells into phenotype classes according to their descriptors. This phenotyping can be applied in a supervised or an unsupervised manner. Unsupervised methods are suitable for the discovery of formerly unknown phenotypes, which are expected to occur in high-throughput RNAi time-lapse screens. We developed an unsupervised phenotyping approach based on Hidden Markov Models (HMMs) with multivariate Gaussian emissions for the detection of knockdown-specific phenotypes in RNAi time-lapse movies. The automated detection of abnormal cell morphologies allows us to assign a phenotypic fingerprint to each gene knockdown. By applying our method to the Mitocheck database, we show that a phenotypic fingerprint is indicative of a gene's function. Our fully unsupervised HMM-based phenotyping is able to automatically identify cell morphologies that are specific for a certain knockdown. Beyond the identification of genes whose knockdown affects cell morphology, phenotypic fingerprints can be used to find modules of functionally related genes.

Correlation of Coseismic Velocity and Static Volumetric Strain Changes Induced by the 2010 Mw6.3 Jiasian Earthquake under the Southern Taiwan Orogenic Belt

NASA Astrophysics Data System (ADS)

Wu, S. M.; Hung, S. H.

2015-12-01

Earthquake-induced temporal changes in seismic velocity of the earth's crust have been demonstrated to be monitored effectively by the time-lapse shifts of coda waves recently. Velocity drop during the coseismic rupture has been explicitly observed in proximity to the epicenters of large earthquakes with different styles of faulting. The origin of such sudden perturbation in crustal properties is closely related to the damage and/or volumetric strain change influenced by seismic slip distribution. In this study, we apply a coda wave interferometry method to investigate potential velocity change in both space and time related to the moderate-sized (Mw6.3) 2010 Jiasian earthquake, which nucleated deeply in the crust (~23 km), ruptured and terminated around the depth of 10 km along a previously unidentified blind thrust fault near the lithotectonic boundary of the southern Taiwan orogenic belt. To decipher the surface and crustal response to this relatively deep rupture, we first measure relative time-lapse changes of coda between different short-term time frames spanning one year covering the pre- and post-seismic stages by using the Moving Window Cross Spectral Method. Rather than determining temporal velocity variations based on a long-term reference stack, we conduct a Bayesian least-squares inversion to obtain the optimal estimates by minimizing the inconsistency between the relative time-lapse shifts of individual short-term stacks. The results show the statistically significant velocity reduction immediately after the mainshock, which is most pronounced at the pairs with the interstation paths traversing through the hanging-wall block of the ruptured fault. The sensitivity of surface wave coda arrivals mainly in the periods of 3-5 s to shear wave speed perturbation is confined within the depth of 10 km, where the crust mostly experienced extensional strain changes induced by the slip distribution from the finite-fault model. Compared with coseismic slip distribution from GPS data and finite-fault inversion, peak ground velocity, and static volumetric strain field following the earthquake, the velocity decrease observed in the hanging wall side of the shallow crust is most likely attributed to pervasive dilatational strain changes induced by the slip rupture on the underlying blind thrust.

Molecular Transport Studies Through Unsupported Lipid Membranes

NASA Astrophysics Data System (ADS)

Rock, William; Parekh, Sapun; Bonn, Mischa

2014-03-01

Dendrimers, spherical polymeric nanoparticles made from branched monomers around a central core, show great promise as drug delivery vehicles. Dendrimer size, core contents, and surface functionality can be synthetically tuned, providing unprecedented versatility. Polyamidoamine (PAMAM) dendrimers have been shown to enter cells; however, questions remain about their biophysical interactions with the cell membrane, specifically about the presence and size of transient pores. We monitor dendrimer-lipid bilayer interactions using unsupported black lipid membranes (BLMs) as model cell membranes. Custom bilayer slides contain two vertically stacked aqueous chambers separated by a 25 μm Teflon sheet with a 120 μm aperture where the bilayer is formed. We vary the composition of model membranes (cholesterol content and lipid phase) to create biomimetic systems and study the interaction of PAMAM G6 and G3 dendrimers with these bilayers. Dendrimers, dextran cargo, and bilayers are monitored and quantified using time-lapse fluorescence imaging. Electrical capacitance measurements are simultaneously recorded to determine if the membrane is porous, and the pore size is deduced by monitoring transport of fluorescent dextrans of increasing molecular weight. These experiments shed light on the importance of cholesterol content and lipid phase on the interaction of dendrimer nanoparticles with membranes.

Understanding leachate flow in municipal solid waste landfills by combining time-lapse ERT and subsurface flow modelling - Part I: Analysis of infiltration shape on two different waste deposit cells.

PubMed

Audebert, M; Clément, R; Moreau, S; Duquennoi, C; Loisel, S; Touze-Foltz, N

2016-09-01

Landfill bioreactors are based on an acceleration of in-situ waste biodegradation by performing leachate recirculation. To quantify the water content and to evaluate the leachate injection system, in-situ methods are required to obtain spatially distributed information, usually electrical resistivity tomography (ERT). In a previous study, the MICS (multiple inversions and clustering strategy) methodology was proposed to improve the hydrodynamic interpretation of ERT results by a precise delimitation of the infiltration area. In this study, MICS was applied on two ERT time-lapse data sets recorded on different waste deposit cells in order to compare the hydrodynamic behaviour of leachate flow between the two cells. This comparison is based on an analysis of: (i) the volume of wetted waste assessed by MICS and the wetting rate, (ii) the infiltration shapes and (iii) the pore volume used by the leachate flow. This paper shows that leachate hydrodynamic behaviour is comparable from one waste deposit cell to another with: (i) a high leachate infiltration speed at the beginning of the infiltration, which decreases with time, (ii) a horizontal anisotropy of the leachate infiltration shape and (iii) a very small fraction of the pore volume used by the leachate flow. This hydrodynamic information derived from MICS results can be useful for subsurface flow modelling used to predict leachate flow at the landfill scale. Copyright © 2016 Elsevier Ltd. All rights reserved.

Determinants of return behavior: a comparison of current and lapsed donors.

PubMed

Germain, Marc; Glynn, Simone A; Schreiber, George B; Gélinas, Stéphanie; King, Melissa; Jones, Mike; Bethel, James; Tu, Yongling

2007-10-01

There is a need to identify factors explaining why some people stop donating blood. A random mail survey of first-time (FT) and repeat (RPT) current (donating within 6 months before survey) and lapsed (donating >2 years prior) donors was conducted. The self-administered questionnaire included questions on personal, social, and behavioral characteristics. Among 1280 current and 1672 lapsed donors with valid addresses, the participation rate was 66.8 and 39.2 percent, respectively. In FT donors, the odds of lapsing increased with education (odds ratio [OR], 2.18; 95% confidence interval [CI], 1.34-3.55 for college or higher vs. Grade 12 or less education). Lapsed FT donors were more often asked to donate (OR, 1.89; 95% CI, 1.32-2.70) and had less interest in incentives (p < 0.001) than current FT donors. In RPT donors, lapsed status was associated with being younger (p < 0.001) and female (OR, 1.19; 95% CI, 1.00-1.42). Lapsed status was inversely associated with satisfaction with the last donation experience in both FT (p = 0.043) and RPT (p < 0.001) donors. Lapsed and current donors did not differ in perceived need for blood, personal transfusion experience, or mean reported altruistic behavior score. A positive donation experience appears to be a major determinant of donor return behavior. Lapsed donors do not appear, on average, to engage in fewer altruistic behaviors than currently active donors. Retention marketing strategies that appeal solely to altruistic values need to be further evaluated for their effectiveness.

Spectroscopic Studies on the Effect of Some Ferrocene Derivatives in the Formation of Silver Nanoparticles.

PubMed

Sanyal, Manik Kumar; Biswas, Bipul; Chowdhury, Avijit; Mallik, Biswanath

2016-06-01

Silver nanoparticles were prepared by microwave assisted method using silver nitrate as precursor in the presence of some ferrocene derivatives. The formation of the silver nanoparticles was monitored using UV-Vis spectroscopy. The UV-Vis spectroscopy revealed the formation of silver nanoparticles by exhibiting typical surface plasmon absorption band. The position of plasmon band (406-429 nm) was observed to depend on the nature of a particular ferrocene derivative used. TEM images indicated that the nanoparticles were spherical in shape and well-dispersed. Quantum dots (3.2 nm) were prepared by using ferrocenecarboxylic acid. The surface plasmon absorption band has shown red shift with increasing concentration of ferrocene derivative. For different duration of microwave heating time, intensity of absorption spectra in general was found to increase except in presence of ferrocene carbaldehyde where it decreased. Time-dependent spectra have indicated almost stable position of the surface plasmon band with increasing time of observation confirming that the as prepared silver nanoparticles did not aggregate with lapse of time.

Does extinction of responses to cigarette cues occur during smoking cessation?

PubMed

O'Connell, Kathleen A; Shiffman, Saul; Decarlo, Lawrence T

2011-02-01

This study investigated whether Pavlovian extinction occurs during smoking cessation by determining whether experience abstaining from smoking in the presence of cigarette cues leads to decreased probability of lapsing and whether this effect is mediated by craving. Secondary analyses were carried out with data sets from two studies with correlational/observational designs. Data were collected in smokers' natural environments using ecological momentary assessment techniques. Sixty-one and 207 smokers who were attempting cessation participated. Multi-level path models were used to examine effects of prior experience abstaining in the presence of available cigarettes and while others were smoking on subsequent craving intensity and the probability of lapsing. Control variables included current cigarette availability, current exposure to others smoking, number of prior lapses and time in the study. Both currently available cigarettes [odds ratios (OR) = 36.60, 11.59] and the current presence of other smoking (OR = 5.00, 1.52) were powerful predictors of smoking lapse. Repeated exposure to available cigarettes without smoking was associated with a significantly lower probability of lapse in subsequent episodes (OR = 0.44, 0.52). However, exposure to others smoking was not a reliable predictor, being significant only in the smaller study (OR = 0.30). Craving functioned as a mediator between extinction of available cigarettes and lapsing only in the smaller study and was not a mediator for extinction of others smoking in either study. This study showed that exposure to available cigarettes is a large risk factor for lapsing, but that this risk can also be reduced over time by repeated exposures without smoking. Smoking cessation interventions should attempt to reduce cigarette exposure (by training cigarette avoidance) but recognize the potential advantage of unreinforced exposure to available cigarettes. © 2010 The Authors, Addiction © 2010 Society for the Study of Addiction.

Developing an EEG-based on-line closed-loop lapse detection and mitigation system

PubMed Central

Wang, Yu-Te; Huang, Kuan-Chih; Wei, Chun-Shu; Huang, Teng-Yi; Ko, Li-Wei; Lin, Chin-Teng; Cheng, Chung-Kuan; Jung, Tzyy-Ping

2014-01-01

In America, 60% of adults reported that they have driven a motor vehicle while feeling drowsy, and at least 15–20% of fatal car accidents are fatigue-related. This study translates previous laboratory-oriented neurophysiological research to design, develop, and test an On-line Closed-loop Lapse Detection and Mitigation (OCLDM) System featuring a mobile wireless dry-sensor EEG headgear and a cell-phone based real-time EEG processing platform. Eleven subjects participated in an event-related lane-keeping task, in which they were instructed to manipulate a randomly deviated, fixed-speed cruising car on a 4-lane highway. This was simulated in a 1st person view with an 8-screen and 8-projector immersive virtual-reality environment. When the subjects experienced lapses or failed to respond to events during the experiment, auditory warning was delivered to rectify the performance decrements. However, the arousing auditory signals were not always effective. The EEG spectra exhibited statistically significant differences between effective and ineffective arousing signals, suggesting that EEG spectra could be used as a countermeasure of the efficacy of arousing signals. In this on-line pilot study, the proposed OCLDM System was able to continuously detect EEG signatures of fatigue, deliver arousing warning to subjects suffering momentary cognitive lapses, and assess the efficacy of the warning in near real-time to rectify cognitive lapses. The on-line testing results of the OCLDM System validated the efficacy of the arousing signals in improving subjects' response times to the subsequent lane-departure events. This study may lead to a practical on-line lapse detection and mitigation system in real-world environments. PMID:25352773

Coupled thermo-geophysical inversion for high-latitude permafrost monitoring - assessment of the method and practical considerations

NASA Astrophysics Data System (ADS)

Tomaskovicova, Sonia; Paamand, Eskild; Ingeman-Nielsen, Thomas; Bauer-Gottwein, Peter

2013-04-01

The sedimentary settings of West Greenlandic towns with their fine-grained, often ice-rich marine deposits are of great concern in building and construction projects in Greenland, as they lose volume, strength and bearing capacity upon thaw. Since extensive permafrost thawing over large areas of inhabited Greenlandic coast has been predicted as a result of climate change, it is of great both technical and economical interest to assess the extent and thermal properties of such formations. Availability of methods able to determine the thermal parameters of permafrost and forecast its reaction to climate evolution is therefore crucial for sustainable infrastructure planning and development in the Arctic. We are developing a model of heat transport for permafrost able to assess the thermal properties of the ground based on calibration by surface geoelectrical measurements and ground surface temperature measurements. The advantages of modeling approach and use of exclusively surface measurements (in comparison with direct measurements on core samples) are smaller environmental impact, cheaper logistics, assessment of permafrost conditions over larger areas and possibility of forecasting of the fate of permafrost by application of climate forcing. In our approach, the heat model simulates temperature distribution in the ground based on ground surface temperature, specified proportions of the ground constituents and their estimated thermal parameters. The calculated temperatures in the specified model layers are governing the phase distribution between unfrozen water and ice. The changing proportion of unfrozen water content as function of temperature is the main parameter driving the evolution of electrical properties of the ground. We use a forward modeling scheme to calculate the apparent resistivity distribution of such a ground as if collected from a surface geoelectrical array. The calculated resistivity profile is compared to actual field measurements and a difference between the synthetic and the measured apparent resistivities is minimized in a least-squares inversion procedure by adjusting the thermal parameters of the heat model. A site-specific calibration is required since the relation between unfrozen water content and temperature is strongly dependent on the grain size of the soil. We present details of an automated permanent field measurement setup that has been established to collect the calibration data in Ilulissat, West Greenland. Considering the station location in high latitude environment, this setup is unique of its kind since the installation of automated geophysical stations in the Arctic conditions is a challenging task. The main issues are related to availability of adapted equipment, high demand on robustness of the equipment and method due to the harsh environment, remoteness of the field sites and related powering issues of such systems. By showing the results from the new-established geoelectrical station over the freezing period in autumn 2012, we prove the 2D time lapse resistivity tomography to be an effective method for permafrost monitoring in high latitudes. We demonstrate the effectivity of time lapse geoelectrical signal for petrophysical relationship calibration, which is enhanced comparing to sparse measurements.

Stimulant Treatment Reduces Lapses in Attention among Children with ADHD: The Effects of Methylphenidate on Intra-Individual Response Time Distributions

ERIC Educational Resources Information Center

Spencer, Sarah V.; Hawk, Larry W., Jr.; Richards, Jerry B.; Shiels, Keri; Pelham, William E., Jr.; Waxmonsky, James G.

2009-01-01

Recent research has suggested that intra-individual variability in reaction time (RT) distributions of children with ADHD is characterized by a particularly large rightward skew that may reflect lapses in attention. The purpose of the study was to provide the first randomized, placebo-controlled test of the effects of the stimulant methylphenidate…

Lapse of time effects on tax evasion in an agent-based econophysics model

NASA Astrophysics Data System (ADS)

Seibold, Götz; Pickhardt, Michael

2013-05-01

We investigate an inhomogeneous Ising model in the context of tax evasion dynamics where different types of agents are parameterized via local temperatures and magnetic fields. In particular, we analyze the impact of lapse of time effects (i.e. backauditing) and endogenously determined penalty rates on tax compliance. Both features contribute to a microfoundation of agent-based econophysics models of tax evasion.

Mesoscopic in vivo 3-D tracking of sparse cell populations using angular multiplexed optical projection tomography

PubMed Central

Chen, Lingling; Alexandrov, Yuriy; Kumar, Sunil; Andrews, Natalie; Dallman, Margaret J.; French, Paul M. W.; McGinty, James

2015-01-01

We describe an angular multiplexed imaging technique for 3-D in vivo cell tracking of sparse cell distributions and optical projection tomography (OPT) with superior time-lapse resolution and a significantly reduced light dose compared to volumetric time-lapse techniques. We demonstrate that using dual axis OPT, where two images are acquired simultaneously at different projection angles, can enable localization and tracking of features in 3-D with a time resolution equal to the camera frame rate. This is achieved with a 200x reduction in light dose compared to an equivalent volumetric time-lapse single camera OPT acquisition with 200 projection angles. We demonstrate the application of this technique to mapping the 3-D neutrophil migration pattern observed over ~25.5 minutes in a live 2 day post-fertilisation transgenic LysC:GFP zebrafish embryo following a tail wound. PMID:25909009

Mesoscopic in vivo 3-D tracking of sparse cell populations using angular multiplexed optical projection tomography.

PubMed

Chen, Lingling; Alexandrov, Yuriy; Kumar, Sunil; Andrews, Natalie; Dallman, Margaret J; French, Paul M W; McGinty, James

2015-04-01

We describe an angular multiplexed imaging technique for 3-D in vivo cell tracking of sparse cell distributions and optical projection tomography (OPT) with superior time-lapse resolution and a significantly reduced light dose compared to volumetric time-lapse techniques. We demonstrate that using dual axis OPT, where two images are acquired simultaneously at different projection angles, can enable localization and tracking of features in 3-D with a time resolution equal to the camera frame rate. This is achieved with a 200x reduction in light dose compared to an equivalent volumetric time-lapse single camera OPT acquisition with 200 projection angles. We demonstrate the application of this technique to mapping the 3-D neutrophil migration pattern observed over ~25.5 minutes in a live 2 day post-fertilisation transgenic LysC:GFP zebrafish embryo following a tail wound.

The effect of water storage, elapsed time and contaminants on the bond strength and interfacial polymerization of a nanohybrid composite.

PubMed

Perriard, Jean; Lorente, Maria Cattani; Scherrer, Susanne; Belser, Urs C; Wiskott, H W Anselm

2009-12-01

To systematically characterize the effect of time lapse, water storage, and selected contaminants on the bond strength of a nanofilled dental composite. Half-dumbbell-shaped samples were fabricated out of light-polymerizing composite resin. To function as substrates they were aged for 30 days in water. Prior to bonding, the substrates' surfaces were subjected to the following treatments: 1) Removing a 0.2- to 0.4-mm layer using a fluted carbide bur; 2) grit blasting with 50 microm alumina particles; 3) etching with phosphoric acid gel; 4) grit blasting followed by etching; 5) blasting with tribochemical particles followed by silane application; 6) sanding with 400-grit paper, air aging of the adherent half-sample before bonding; 7) surface contamination with saliva; 8) surface contamination with blood. In each group (n = 30), freshly polymerized (except in group 6) adherent half-samples were bonded to the substrate half-samples by a layer of unfilled adhesive resin. Fifteen full dumbbell-shaped specimens were subjected to tensile testing after 1 h and 15 after 7 days water storage. In a positive control group, freshly cured half-samples were bonded shortly after fabrication. The tensile strength was analyzed using Weibull statistics and presented in terms of the material's characteristic strength and shape parameter. Fractographs of the two weakest and strongest samples of each group were produced. The surfaces were searched to locate hackle, wake hackle and the origin of the fracture. Surface roughness and time lapse increased the bond strength of the repaired specimens. All groups in which surface roughness was produced before bonding increased in repair strength. Post-bonding aging improved strength. Fractographs yielded interpretable data whenever larger surfaces of single phase bonding resin were present. 1) Roughening and etching an aged composite's surface prior to applying a coat of unfilled resin and the filled material increases repair bond strength by up to 100%. 2) The repair bond strength of a roughened aged composite is 25% to 30% inferior to the tensile strength of solid specimens. 3) After 7 days' storage in water, no detrimental effect could be seen from saliva or blood contamination if the surfaces were properly rinsed.

Time-lapse and slow-motion tracking of temperature changes: response time of a thermometer

NASA Astrophysics Data System (ADS)

Moggio, L.; Onorato, P.; Gratton, L. M.; Oss, S.

2017-03-01

We propose the use of a smartphone based time-lapse and slow-motion video techniques together with tracking analysis as valuable tools for investigating thermal processes such as the response time of a thermometer. The two simple experimental activities presented here, suitable also for high school and undergraduate students, allow one to measure in a simple yet rigorous way the response time of an alcohol thermometer and show its critical dependence on the properties of the surrounding environment giving insight into instrument characteristics, heat transfer and thermal equilibrium concepts.

Review: Some low-frequency electrical methods for subsurface characterization and monitoring in hydrogeology

NASA Astrophysics Data System (ADS)

Revil, A.; Karaoulis, M.; Johnson, T.; Kemna, A.

2012-06-01

Low-frequency geoelectrical methods include mainly self-potential, resistivity, and induced polarization techniques, which have potential in many environmental and hydrogeological applications. They provide complementary information to each other and to in-situ measurements. The self-potential method is a passive measurement of the electrical response associated with the in-situ generation of electrical current due to the flow of pore water in porous media, a salinity gradient, and/or the concentration of redox-active species. Under some conditions, this method can be used to visualize groundwater flow, to determine permeability, and to detect preferential flow paths. Electrical resistivity is dependent on the water content, the temperature, the salinity of the pore water, and the clay content and mineralogy. Time-lapse resistivity can be used to assess the permeability and dispersivity distributions and to monitor contaminant plumes. Induced polarization characterizes the ability of rocks to reversibly store electrical energy. It can be used to image permeability and to monitor chemistry of the pore water-minerals interface. These geophysical methods, reviewed in this paper, should always be used in concert with additional in-situ measurements (e.g. in-situ pumping tests, chemical measurements of the pore water), for instance through joint inversion schemes, which is an area of fertile on-going research.

Sequential processing of quantitative phase images for the study of cell behaviour in real-time digital holographic microscopy.

PubMed

Zikmund, T; Kvasnica, L; Týč, M; Křížová, A; Colláková, J; Chmelík, R

2014-11-01

Transmitted light holographic microscopy is particularly used for quantitative phase imaging of transparent microscopic objects such as living cells. The study of the cell is based on extraction of the dynamic data on cell behaviour from the time-lapse sequence of the phase images. However, the phase images are affected by the phase aberrations that make the analysis particularly difficult. This is because the phase deformation is prone to change during long-term experiments. Here, we present a novel algorithm for sequential processing of living cells phase images in a time-lapse sequence. The algorithm compensates for the deformation of a phase image using weighted least-squares surface fitting. Moreover, it identifies and segments the individual cells in the phase image. All these procedures are performed automatically and applied immediately after obtaining every single phase image. This property of the algorithm is important for real-time cell quantitative phase imaging and instantaneous control of the course of the experiment by playback of the recorded sequence up to actual time. Such operator's intervention is a forerunner of process automation derived from image analysis. The efficiency of the propounded algorithm is demonstrated on images of rat fibrosarcoma cells using an off-axis holographic microscope. © 2014 The Authors Journal of Microscopy © 2014 Royal Microscopical Society.

Confocal microscopic observation of structural changes in glass-ionomer cements and tooth interfaces.

PubMed

Watson, T F; Pagliari, D; Sidhu, S K; Naasan, M A

1998-03-01

This study aimed to develop techniques to allow dynamic imaging of a cavity before, during and after placement of glass-ionomer restorative materials. Cavities were cut in recently extracted third molars and the teeth longitudinally sectioned. Each hemisected tooth surface was placed in green modelling compound at 90 to the optical axis of the microscope. The cavity surface was imaged using a video rate confocal microscope in conjunction with an internally focusable microscope objective. The sample on the stage was pushed up to the objective lens which 'clamped' the cover glass onto it. Water, glycerine or oil was placed below the coverglass, with oil above. Internal tooth structures were imaged by changing the internal focus of the objective. The restorative material was then placed into the cavity. Video images were stored either onto video tape or digitally, using a frame grabber, computer and mass memory storage. Software controls produced time-lapse recordings of the interface over time. Preliminary experiments have examined the placement and early maturation of conventional glass-ionomer cements and a syringeable resin-modified glass-ionomer cement. Initial contact of the cement matrix and glass particles was visible as the plastic material rolled past the enamel and dentine, before making a bond. Evidence for water movement from the dentine into the cement has also been seen. After curing, the early dimensional changes in the cements due to water flux were apparent using the time-lapse facility. This new technique enables examination of developing tooth/restoration interfaces and the tracking of movement in materials.

Stochastic Representation and Uncertainty Assessment of a Deep Geothermal Reservoir Using Cross-Borehole ERT: A 3D Synthetic Case

NASA Astrophysics Data System (ADS)

Brunet, P.; Gloaguen, E.

2014-12-01

Designing and monitoring of geothermal systems is a complex task which requires a multidisciplinary approach. Deep geothermal reservoir models are prone to greater uncertainty, with a lack of direct data and lower resolution of surface geophysical methods. However, recent technical advances have enabled the potential use of permanent downhole vertical resistivity arrays for monitoring fluid injection. As electrical resistivity is sensitive to temperature changes, such data could provide valuable information for deep geothermal reservoir characterization. The objective of this study is to assess the potential of time-lapse cross-borehole ERT to constrain 3D realizations of geothermal reservoir properties. The synthetic case of a permeable geothermal reservoir in a sedimentary basin was set up, as a confined deep and saline sandstone aquifer with intermediate reservoir temperatures (150ºC), depth (1 km) and 30m thickness. The reservoir permeability distribution is heterogeneous, as the result of a fluvial depositional environment. The ERT monitoring system design is a triangular arrangement of 3 wells at 150 m spacing, including 1 injection and 1 extraction well. The optimal number and spacing of electrodes of the ERT array design is site-specific and has been assessed through a sensibility study. Dipole-dipole and pole-pole electrode configurations were used. The study workflow was the following: 1) Generation of a reference reservoir model and 100 stochastic realizations of permeability; 2) Simulation of saturated single-phase flow and heat transport of reinjection of cooled formation fluid (50ºC) with TOUGH2 software; 3) Time-lapse forward ERT modeling on the reference model and all realizations (observed and simulated apparent resistivity change); 4) heuristic optimization on ERT computed and calculated data. Preliminary results show significant reduction of parameter uncertainty, hence realization space, with assimilation of cross-borehole ERT data. Loss in sensitivity of ERT between boreholes is compensated here by the stochastic modeling approach, rather than using a deterministic inversion scheme. Our results suggest stochastic reservoir simulations, together with assimilation of cross-borehole ERT data, could be useful tools for design and monitoring of deep geothermal systems.

Monitoring the evolution and migration of a methane gas plume in an unconfined sandy aquifer using time-lapse GPR and ERT.

PubMed

Steelman, Colby M; Klazinga, Dylan R; Cahill, Aaron G; Endres, Anthony L; Parker, Beth L

2017-10-01

Fugitive methane (CH 4 ) leakage associated with conventional and unconventional petroleum development (e.g., shale gas) may pose significant risks to shallow groundwater. While the potential threat of stray (CH 4 ) gas in aquifers has been acknowledged, few studies have examined the nature of its migration and fate in a shallow groundwater flow system. This study examines the geophysical responses observed from surface during a 72day field-scale simulated CH 4 leak in an unconfined sandy aquifer at Canadian Forces Base Borden, Canada, to better understand the transient behaviour of fugitive CH 4 gas in the subsurface. Time-lapse ground-penetrating radar (GPR) and electrical resistivity tomography (ERT) were used to monitor the distribution and migration of the gas-phase and assess any impacts to groundwater hydrochemistry. Geophysical measurements captured the transient formation of a CH 4 gas plume emanating from the injector, which was accompanied by an increase in total dissolved gas pressure (P TDG ). Subsequent reductions in P TDG were accompanied by reduced bulk resistivity around the injector along with an increase in the GPR reflectivity along horizontal bedding reflectors farther downgradient. Repeat temporal GPR reflection profiling identified three events with major peaks in reflectivity, interpreted to represent episodic lateral CH 4 gas release events into the aquifer. Here, a gradual increase in P TDG near the injector caused a sudden lateral breakthrough of gas in the direction of groundwater flow, causing free-phase CH 4 to migrate much farther than anticipated based on groundwater advection. CH 4 accumulated along subtle permeability boundaries demarcated by grain-scale bedding within the aquifer characteristic of numerous Borden-aquifer multi-phase flow experiments. Diminishing reflectivity over a period of days to weeks suggests buoyancy-driven migration to the vadose zone and/or CH 4 dissolution into groundwater. Lateral and vertical CH 4 migration was primarily governed by subtle, yet measurable heterogeneity and anisotropy in the aquifer. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Baseline seismic survey for the 2nd offshore methane hydrate production test in the Eastern Nankai Trough

NASA Astrophysics Data System (ADS)

Teranishi, Y.; Inamori, T.; Kobayashi, T.; Fujii, T.; Saeki, T.; Takahashi, H.; Kobayashi, F.

2017-12-01

JOGMEC carries out seismic monitoring surveys before and after the 2nd offshore methane hydrate (MH) production test in the Eastern Nankai Trough and evaluates MH dissociation behavior from the time-lapse seismic response. In 2016, JOGMEC deployed Ocean Bottom Cable (OBC) system provided by OCC in the Daini Atsumi Knoll with water depths of 900-1100 m. The main challenge of the seismic survey was to optimize the cable layout for ensuring an effective time-lapse seismic detectability while overcoming the following two issues: 1. OBC receiver lines were limited to only two lines. It was predicted that the imaging of shallow reflectors would suffer from lack of continuity and resolution due to this limitation of receiver lines. 2. The seafloor and shallow sedimentary layers including monitoring target are dipping to the Northwest direction. It was predicted that the refection points would laterally shift to up-dip direction (Southeast direction). In order to understand the impact of the issues above, the seismic survey was designed with elastic wave field simulation. The reflection seismic survey for baseline data was conducted in August 2016. A total of 70 receiver stations distributed along one cable were deployed successfully and a total of 9952 shots were fired. After the baseline seismic survey, the hydrophone and geophone vertical component datasets were processed as outlined below: designaturing, denoising, surface consistent deconvolution and surface consistent amplitude correction. High-frequency imaging with Reverse Time Migration (RTM) was introduced to these data sets. Improvements in imaging from the RTM are remarkable compared to the Kirchhoff migration and the existing Pre-stack time migration with 3D marine surface seismic data obtained and processed in 2002, especially in the following parts. The MH concentrated zone which has complex structures. Below the Bottom Simulating Reflector (BSR) which is present as a impedance-contrast boundary

Electromagnetic Monitoring of Hydraulic Fracturing: Relationship to Permeability, Seismicity, and Stress

NASA Astrophysics Data System (ADS)

Thiel, Stephan

2017-09-01

Hydraulic fracking is a geoengineering application designed to enhance subsurface permeability to maximize fluid and gas flow. Fracking is commonly used in enhanced geothermal systems (EGS), tight shale gas, and coal seam gas (CSG) plays and in CO_2 storage scenarios. Common monitoring methods include microseismics and mapping small earthquakes with great resolution associated with fracture opening at reservoir depth. Recently, electromagnetic (EM) methods have been employed in the field to provide an alternative way of direct detection of fluids as they are pumped in the ground. Surface magnetotelluric (MT) measurements across EGS show subtle yet detectable changes during fracking derived from time-lapse MT deployments. Changes are directional and are predominantly aligned with current stress field, dictating preferential fracture orientation, supported by microseismic monitoring of frack-related earthquakes. Modeling studies prior to the injection are crucial for survey design and feasibility of monitoring fracks. In particular, knowledge of sediment thickness plays a fundamental role in resolving subtle changes. Numerical forward modeling studies clearly favor some form of downhole measurement to enhance sensitivity; however, these have yet to be conclusively demonstrated in the field. Nevertheless, real surface-based monitoring examples do not necessarily replicate the expected magnitude of change derived from forward modeling and are larger than expected in some cases from EGS and CSG systems. It appears the injected fluid volume alone cannot account for the surface change in resistivity, but connectedness of pore space is also significantly enhanced and nonlinear. Recent numerical studies emphasize the importance of percolation threshold of the fracture network on both electrical resistivity and permeability, which may play an important role in accounting for temporal changes in surface EM measurements during hydraulic fracking.

Calixarenes and cations: a time-lapse photography of the big-bang.

PubMed

Casnati, Alessandro

2013-08-07

The outstanding cation complexation properties emerging from the pioneering studies on calixarene ligands during a five-year period in the early 1980s triggered a big-bang burst of publications on such macrocycles that is still lasting at a distance of more than 30 years. A time-lapse photography of this timeframe is proposed which allows the readers to pinpoint the contributions of the different research groups.

Time-lapse Raman imaging of osteoblast differentiation

PubMed Central

Hashimoto, Aya; Yamaguchi, Yoshinori; Chiu, Liang-da; Morimoto, Chiaki; Fujita, Katsumasa; Takedachi, Masahide; Kawata, Satoshi; Murakami, Shinya; Tamiya, Eiichi

2015-01-01

Osteoblastic mineralization occurs during the early stages of bone formation. During this mineralization, hydroxyapatite (HA), a major component of bone, is synthesized, generating hard tissue. Many of the mechanisms driving biomineralization remain unclear because the traditional biochemical assays used to investigate them are destructive techniques incompatible with viable cells. To determine the temporal changes in mineralization-related biomolecules at mineralization spots, we performed time-lapse Raman imaging of mouse osteoblasts at a subcellular resolution throughout the mineralization process. Raman imaging enabled us to analyze the dynamics of the related biomolecules at mineralization spots throughout the entire process of mineralization. Here, we stimulated KUSA-A1 cells to differentiate into osteoblasts and conducted time-lapse Raman imaging on them every 4 hours for 24 hours, beginning 5 days after the stimulation. The HA and cytochrome c Raman bands were used as markers for osteoblastic mineralization and apoptosis. From the Raman images successfully acquired throughout the mineralization process, we found that β-carotene acts as a biomarker that indicates the initiation of osteoblastic mineralization. A fluctuation of cytochrome c concentration, which indicates cell apoptosis, was also observed during mineralization. We expect time-lapse Raman imaging to help us to further elucidate osteoblastic mineralization mechanisms that have previously been unobservable. PMID:26211729

Time-lapse Raman imaging of osteoblast differentiation

NASA Astrophysics Data System (ADS)

Hashimoto, Aya; Yamaguchi, Yoshinori; Chiu, Liang-Da; Morimoto, Chiaki; Fujita, Katsumasa; Takedachi, Masahide; Kawata, Satoshi; Murakami, Shinya; Tamiya, Eiichi

2015-07-01

Osteoblastic mineralization occurs during the early stages of bone formation. During this mineralization, hydroxyapatite (HA), a major component of bone, is synthesized, generating hard tissue. Many of the mechanisms driving biomineralization remain unclear because the traditional biochemical assays used to investigate them are destructive techniques incompatible with viable cells. To determine the temporal changes in mineralization-related biomolecules at mineralization spots, we performed time-lapse Raman imaging of mouse osteoblasts at a subcellular resolution throughout the mineralization process. Raman imaging enabled us to analyze the dynamics of the related biomolecules at mineralization spots throughout the entire process of mineralization. Here, we stimulated KUSA-A1 cells to differentiate into osteoblasts and conducted time-lapse Raman imaging on them every 4 hours for 24 hours, beginning 5 days after the stimulation. The HA and cytochrome c Raman bands were used as markers for osteoblastic mineralization and apoptosis. From the Raman images successfully acquired throughout the mineralization process, we found that β-carotene acts as a biomarker that indicates the initiation of osteoblastic mineralization. A fluctuation of cytochrome c concentration, which indicates cell apoptosis, was also observed during mineralization. We expect time-lapse Raman imaging to help us to further elucidate osteoblastic mineralization mechanisms that have previously been unobservable.

40 CFR 60.2655 - How do I renew my lapsed operator qualification?

Code of Federal Regulations, 2014 CFR

2014-07-01

... PROGRAMS (CONTINUED) STANDARDS OF PERFORMANCE FOR NEW STATIONARY SOURCES Emissions Guidelines and Compliance Times for Commercial and Industrial Solid Waste Incineration Units Model Rule-Operator Training...) For a lapse of less than 3 years, you must complete a standard annual refresher course described in...

40 CFR 60.2655 - How do I renew my lapsed operator qualification?

Code of Federal Regulations, 2013 CFR

2013-07-01

... PROGRAMS (CONTINUED) STANDARDS OF PERFORMANCE FOR NEW STATIONARY SOURCES Emissions Guidelines and Compliance Times for Commercial and Industrial Solid Waste Incineration Units Model Rule-Operator Training...) For a lapse of less than 3 years, you must complete a standard annual refresher course described in...

Keratinocyte Motility Is Affected by UVA Radiation-A Comparison between Normal and Dysplastic Cells.

PubMed

Niculiţe, Cristina M; Nechifor, Marina T; Urs, Andreea O; Olariu, Laura; Ceafalan, Laura C; Leabu, Mircea

2018-06-07

UVA radiation induces multiple and complex changes in the skin, affecting epidermal cell behavior. This study reports the effects of UVA exposure on normal (HaCaT) and dysplastic (DOK) keratinocytes. The adherence, spreading and proliferation were investigated by time-lapse measurement of cell layer impedance on different matrix proteins. Prior to UVA exposure, the time required for adherence and spreading did not differ significantly for HaCaT and DOK cells, while spreading areas were larger for HaCaT cells. Under UVA exposure, HaCaT and DOK cells behavior differed in terms of movement and proliferation. The cells' ability to cover the denuded surface and individual cell trajectories were recorded by time-lapse videomicroscopy, during wound healing experiments. Dysplastic keratinocytes showed more sensitivity to UVA, exhibiting transient deficiencies in directionality of movement and a delay in re-coating the denuded area. The actin cytoskeleton displayed a cortical organization immediately after irradiation, in both cell lines, similar to mock-irradiated cells. Post-irradiation, DOK cells displayed a better organization of stress fibers, persistent filopodia, and new, stronger focal contacts. In conclusion, after UVA exposure HaCaT and DOK cells showed a different behavior in terms of adherence, spreading, motility, proliferation, and actin cytoskeleton dynamics, with the dyplastic keratinocytes being more sensitive.

The examination and identification of bite marks in foods using 3D scanning and 3D comparison methods.

PubMed

Naether, Silvio; Buck, Ursula; Campana, Lorenzo; Breitbeck, Robert; Thali, Michael

2012-01-01

Bite mark analysis offers the opportunity to identify the biter based on the individual characteristics of the dentitions. Normally, the main focus is on analysing bite mark injuries on human bodies, but also, bite marks in food may play an important role in the forensic investigation of a crime. This study presents a comparison of simulated bite marks in different kinds of food with the dentitions of the presumed biter. Bite marks were produced by six adults in slices of buttered bread, apples, different kinds of Swiss chocolate and Swiss cheese. The time-lapse influence of the bite mark in food, under room temperature conditions, was also examined. For the documentation of the bite marks and the dentitions of the biters, 3D optical surface scanning technology was used. The comparison was performed using two different software packages: the ATOS modelling and analysing software and the 3D studio max animation software. The ATOS software enables an automatic computation of the deviation between the two meshes. In the present study, the bite marks and the dentitions were compared, as well as the meshes of each bite mark which were recorded in the different stages of time lapse. In the 3D studio max software, the act of biting was animated to compare the dentitions with the bite mark. The examined food recorded the individual characteristics of the dentitions very well. In all cases, the biter could be identified, and the dentitions of the other presumed biters could be excluded. The influence of the time lapse on the food depends on the kind of food and is shown on the diagrams. However, the identification of the biter could still be performed after a period of time, based on the recorded individual characteristics of the dentitions.

Recreational use assessment of water-based activities, using time-lapse construction cameras.

PubMed

Sunger, Neha; Teske, Sondra S; Nappier, Sharon; Haas, Charles N

2012-01-01

Recreational exposure to surface waters during periods of increased pathogen concentration may lead to a significantly higher risk of illness. However, estimates of elementary exposure factors necessary to evaluate health risk (i.e., usage distributions and exposure durations) are not available for many non-swimming water-related activities. No prior studies have assessed non-swimming water exposure with respect to factors leading to impaired water quality from increased pathogen concentration, such as weather condition (rain events produce increased runoff and sewer overflows) and type of day (heavy recreational periods). We measured usage patterns and evaluated the effect of weather and type of day at eight water sites located within Philadelphia, by using a novel "time lapse photography" technology during three peak recreational seasons (May-September) 2008-2010. Camera observations validated with simultaneous in-person surveys exhibited a strong correlation (R(2)=0.81 to 0.96) between the two survey techniques, indicating that the application of remote photography in collecting human exposure data was appropriate. Recreational activities usage varied more on a temporal basis than due to inclement weather. Only 14% (6 out of 44) of the site-specific activity combinations showed dry weather preference, whereas 41.5% (17 out of 41) of the combinations indicated greater usage on weekends as compared with weekday. In general, the log normal distribution described the playing and wading duration distribution, while the gamma distribution was the best fit for fishing durations. Remote photography provided unbiased, real-time human exposure data and was less personnel intensive compared with traditional survey methods. However, there are potential limitations associated with remote surveillance data related to its limited view. This is the first study to report that time lapse cameras can be successfully applied to assess water-based human recreational patterns and can provide precise exposure statistics for non-swimming recreational exposures.

Variation in Phenometric Lapse Rates in Pasture Resources across Four Rayons in Kyrgyzstan

NASA Astrophysics Data System (ADS)

Henebry, G. M.; Tomaszewska, M. A.; Kelgenbaeva, K.

2017-12-01

High elevation pasture resources form the foundation of agro-pastoralist livelihoods in Kyrgyzstan and elsewhere in montane Central Asia. We explore the temporal and the topographical variation in phenometric lapse rates (PLRs: the change in a phenometric as a function of elevation) across four rayons in two oblasts of the Kyrgyz Republic—Alay, At-Bashy, Chong Alay, and Naryn—with the aim of identifying and quantifying robust generic patterns in the PLRs. We evaluate two fundamental phenometrics derived from the downward convex quadratic model of land surface phenology that links the NDVI to accumulated growing degree-day (AGDD). The peak height (PH) is the maximum NDVI value obtained from the fitted model. The thermal time to peak (TTP) is the amount of AGDD required to reach the PH. We fitted sixteen years of Landsat NDVI data at 30 m spatial resolution to annual AGDD progressions derived from MODIS land surface temperature time series at 1 km spatial resolution, yielding maps for each phenometric. If the coefficient of determination was less than 0.5, then the model fit was deemed a failure. We classified the reliability of pasture resources into five classes based on the number of years of successful model fit: very persistent (14-16 y); persistent (11-13 y); marginal (7-10 y); occasional (4-6); and rare (1-3). We explore the interactive roles of elevation, slope, aspect, latitude, and rayon on the PLRs and pasture resource persistence to identify critical areas for resource management.

Thermal erosion of a permafrost coastline: Improving process-based models using time-lapse photography

USGS Publications Warehouse

Wobus, C.; Anderson, R.; Overeem, I.; Matell, N.; Clow, G.; Urban, F.

2011-01-01

Coastal erosion rates locally exceeding 30 m y-1 have been documented along Alaska's Beaufort Sea coastline, and a number of studies suggest that these erosion rates have accelerated as a result of climate change. However, a lack of direct observational evidence has limited our progress in quantifying the specific processes that connect climate change to coastal erosion rates in the Arctic. In particular, while longer ice-free periods are likely to lead to both warmer surface waters and longer fetch, the relative roles of thermal and mechanical (wave) erosion in driving coastal retreat have not been comprehensively quantified. We focus on a permafrost coastline in the northern National Petroleum Reserve-Alaska (NPR-A), where coastal erosion rates have averaged 10-15 m y-1 over two years of direct monitoring. We take advantage of these extraordinary rates of coastal erosion to observe and quantify coastal erosion directly via time-lapse photography in combination with meteorological observations. Our observations indicate that the erosion of these bluffs is largely thermally driven, but that surface winds play a crucial role in exposing the frozen bluffs to the radiatively warmed seawater that drives melting of interstitial ice. To first order, erosion in this setting can be modeled using formulations developed to describe iceberg deterioration in the open ocean. These simple models provide a conceptual framework for evaluating how climate-induced changes in thermal and wave energy might influence future erosion rates in this setting.

Examining diel patterns of soil and xylem moisture using electrical resistivity imaging

NASA Astrophysics Data System (ADS)

Mares, Rachel; Barnard, Holly R.; Mao, Deqiang; Revil, André; Singha, Kamini

2016-05-01

The feedbacks among forest transpiration, soil moisture, and subsurface flowpaths are poorly understood. We investigate how soil moisture is affected by daily transpiration using time-lapse electrical resistivity imaging (ERI) on a highly instrumented ponderosa pine and the surrounding soil throughout the growing season. By comparing sap flow measurements to the ERI data, we find that periods of high sap flow within the diel cycle are aligned with decreases in ground electrical conductivity and soil moisture due to drying of the soil during moisture uptake. As sap flow decreases during the night, the ground conductivity increases as the soil moisture is replenished. The mean and variance of the ground conductivity decreases into the summer dry season, indicating drier soil and smaller diel fluctuations in soil moisture as the summer progresses. Sap flow did not significantly decrease through the summer suggesting use of a water source deeper than 60 cm to maintain transpiration during times of shallow soil moisture depletion. ERI captured spatiotemporal variability of soil moisture on daily and seasonal timescales. ERI data on the tree showed a diel cycle of conductivity, interpreted as changes in water content due to transpiration, but changes in sap flow throughout the season could not be interpreted from ERI inversions alone due to daily temperature changes.

Microfluidic device enabled quantitative time-lapse microscopic-photography for phenotyping vegetative and reproductive phases in Fusarium virguliforme, which is pathogenic to soybean.

PubMed

Marshall, Jill; Qiao, Xuan; Baumbach, Jordan; Xie, Jingyu; Dong, Liang; Bhattacharyya, Madan K

2017-03-15

Time-lapse microscopic-photography allows in-depth phenotyping of microorganisms. Here we report development of such a system using a microfluidic device, generated from polydimethylsiloxane and glass slide, placed on a motorized stage of a microscope for conducting time-lapse microphotography of multiple observations in 20 channels simultaneously. We have demonstrated the utility of the device in studying growth, germination and sporulation in Fusarium virguliforme that causes sudden death syndrome in soybean. To measure the growth differences, we developed a polyamine oxidase fvpo1 mutant in this fungus that fails to grow in minimal medium containing polyamines as the sole nitrogen source. Using this system, we demonstrated that the conidiospores of the pathogen take an average of five hours to germinate. During sporulation, it takes an average of 10.5 h for a conidiospore to mature and get detached from its conidiophore for the first time. Conidiospores are developed in a single conidiophore one after another. The microfluidic device enabled quantitative time-lapse microphotography reported here should be suitable for screening compounds, peptides, micro-organisms to identify fungitoxic or antimicrobial agents for controlling serious plant pathogens. The device could also be applied in identifying suitable target genes for host-induced gene silencing in pathogens for generating novel disease resistance in crop plants.

Time-lapse resistivity investigation of salinity changes at an ex-promontory land: a case study of Carey Island, Selangor, Malaysia.

PubMed

Tajul Baharuddin, Mohamad Faizal; Taib, Samsudin; Hashim, Roslan; Zainal Abidin, Mohd Hazreek; Ishak, Mohd Fakhrurrazi

2011-09-01

Time-lapse resistivity measurements and groundwater geochemistry were used to study salinity effect on groundwater aquifer at the ex-promontory-land of Carey Island in Malaysia. Resistivity was measured by ABEM Terrameter SAS4000 and ES10-64 electrode selector. Relationship between earth resistivity and total dissolved solids (TDS) was derived, and with resistivity images, used to identify water types: fresh (ρ ( e ) > 6.5 Ω m), brackish (3 Ω m < ρ ( e ) < 6.5 Ω m), or saline (ρ ( e ) < 3 Ω m). Long-term monitoring of the studied area's groundwater quality via measurements of its time-lapse resistivity showed salinity changes in the island's groundwater aquifers not conforming to seawater-freshwater hydraulic gradient. In some aquifers far from the coast, saline water was dominant, while in some others, freshwater 30 m thick showed groundwater potential. Land transformation is believed to have changed the island's hydrogeology, which receives saltwater pressure all the time, limiting freshwater recharge to the groundwater system. The time-lapse resistivity measurements showed active salinity changes at resistivity-image bottom moving up the image for two seasons' (wet and dry) conditions. The salinity changes are believed to have been caused by incremental tide passing through highly porous material in the active-salinity-change area. The study's results were used to plan a strategy for sustainable groundwater exploration of the island.

Activity patterns and monitoring numbers of Horned Puffins and Parakeet Auklets

USGS Publications Warehouse

Hatch, Shyla A.

2002-01-01

Nearshore counts of birds on the water and time-lapse photography were used to monitor seasonal activity patterns and interannual variation in numbers of Horned Puffins (Fratercula corniculata) and Parakeet Auklets (Aethia psittacula) at the Semidi Islands, Alaska. The best period for over-water counts was mid egg-laying through hatching in auklets and late prelaying through early hatching in puffins. Daily counts (07.00 h-09.30 h) varied widely, with peak numbers and days with few or no birds present occurring throughout the census period. Variation among annual means in four years amounted to 26% and 72% of total count variation in puffins and auklets, respectively. Time-lapse photography of nesting habitat in early incubation revealed a morning (08.00 h-12.00 h) peak in the number of puffins loitering on study plots. Birds recorded in time-lapse images never comprised more than a third of the estimated breeding population on a plot. Components of variance in the time-lapse study were 29% within hours, 9% among hours (08.00 h-12.00 h), and 62% among days (8-29 June). Variability of overwater and land-based counts is reduced by standardizing the time of day when counts are made, but weather conditions had little influence on either type of count. High international variation of population indices implies low power to detect numerical trends in crevice-nesting auklets and puffins.

Are seismic velocity time-lapse changes due to fluid substitution or matrix dissolution? A CO2 sequestration study at Pohokura Field, New Zealand

NASA Astrophysics Data System (ADS)

Adam, L.; Sim, C. Y.; Macfarlane, J.; van Wijk, K.; Shragge, J. C.; Higgs, K.

2015-12-01

Time-lapse seismic signatures can be used to quantify fluid saturation and pressure changes in a reservoir undergoing CO2 sequestration. However, the injection of CO2 acidifies the water, which may dissolve and/or precipitate minerals. Understanding the impact on the rock frame from field seismic time-lapse changes remains an outstanding challenge. Here, we study the effects of carbonate-CO2-water reactions on the physical and elastic properties of rock samples with variable volumes of carbonate cementation. The effects of fluid substitution alone (brine to CO2) and those due to the combination of fluid substitution and mineral dissolution on time-lapse seismic signatures are studied by combining laboratory data, geophysical well-log data and 1-D seismic modeling. Nine rocks from Pohokura Field (New Zealand) are reacted with carbonic acid. The elastic properties are measured using a high-density laser-ultrasonic setup. We observe that P-wave velocity changes up to -19% and correlate with sandstone grain size. Coarse-grained sandstones show greater changes in elastic wave velocities due to dissolution than fine-grained sandstones. To put this in perspective, this velocity change is comparable to the effect of fluid substitution from brine to CO2. This can potentially create an ambiguity in the interpretation of the physical processes responsible for time-lapse signatures in a CO2injection scenario. The laboratory information is applied onto well-log data to model changes in elastic properties of sandstones at the well-log scale. Well-logs and core petrographic analyses are used to find an elastic model that best describes the observed elastic waves velocities in the cemented reservoir sandstones. The Constant-cement rock physics model is found to predict the elastic behaviour of the cemented sandstones. A possible late-time sequestration scenario is that both mineral dissolution and fluid substitution occur in the reservoir. 1-D synthetic seismograms show that seismic amplitudes can change up to 126% in such a scenario. Our work shows that it is important to consider that time-lapse seismic signatures in carbonate-cemented reservoirs can result not only from fluid and pressure changes but also potentially from chemical reaction between CO2-water mixtures and carbonate cemented sandstones.

Application of time-lapse ERT to Characterize Soil-Water-Disease Interactions of Citrus Orchard - Case Study

NASA Astrophysics Data System (ADS)

Peddinti, S. R.; Kbvn, D. P.; Ranjan, S.; Suradhaniwar, S.; J, P. A.; R M, G.

2015-12-01

Vidarbha region in Maharashtra, India (home for mandarin Orange) experience severe climatic uncertainties resulting in crop failure. Phytopthora are the soil-borne fungal species that accumulate in the presence of moisture, and attack the root / trunk system of Orange trees at any stage. A scientific understanding of soil-moisture-disease relations within the active root zone under different climatic, irrigation, and crop cycle conditions can help in practicing management activities for improved crop yield. In this study, we developed a protocol for performing 3-D time-lapse electrical resistivity tomography (ERT) at micro scale resolution to monitor the changes in resistivity distribution within the root zone of Orange trees. A total of 40 electrodes, forming a grid of 3.5 m x 2 m around each Orange tree were used in ERT survey with gradient and Wenner configurations. A laboratory test on un-disturbed soil samples of the region was performed to plot the variation of electrical conductivity with saturation. Curve fitting techniques were applied to get the modified Archie's model parameters. The calibrated model was further applied to generate the 3-D soil moisture profiles of the study area. The point estimates of soil moisture were validated using TDR probe measurements at 3 different depths (10, 20, and 40 cm) near to the root zone. In order to understand the effect of soil-water relations on plant-disease relations, we performed ERT analysis at two locations, one at healthy and other at Phytopthora affected Orange tree during the crop cycle, under dry and irrigated conditions. The degree to which an Orange tree is affected by Phytopthora under each condition is evaluated using 'grading scale' approach following visual inspection of the canopy features. Spatial-temporal distribution of moisture profiles is co-related with grading scales to comment on the effect of climatic and irrigation scenarios on the degree and intensity of crop disease caused by Phytopthora.

Long Time-lapse Nanoscopy with Spontaneously Blinking Membrane Probes

PubMed Central

Takakura, Hideo; Zhang, Yongdeng; Erdmann, Roman S.; Thompson, Alexander D.; Lin, Yu; McNellis, Brian; Rivera-Molina, Felix; Uno, Shin-nosuke; Kamiya, Mako; Urano, Yasuteru; Rothman, James E.; Bewersdorf, Joerg; Schepartz, Alanna; Toomre, Derek

2017-01-01

Long time-lapse, diffraction-unlimited super-resolution imaging of cellular structures and organelles in living cells is highly challenging, as it requires dense labeling, bright, highly photostable dyes, and non-toxic conditions. We developed a set of high-density, environment-sensitive (HIDE) membrane probes based on HMSiR that assemble in situ and enable long time-lapse, live cell nanoscopy of discrete cellular structures and organelles with high spatio-temporal resolution. HIDE-enabled nanoscopy movies are up to 50x longer than movies obtained with labeled proteins, reveal the 2D dynamics of the mitochondria, plasma membrane, and filopodia, and the 2D and 3D dynamics of the endoplasmic reticulum in living cells. These new HIDE probes also facilitate the acquisition of live cell, two-color, super-resolution images, greatly expanding the utility of nanoscopy to visualize processes and structures in living cells. PMID:28671662

3-minute smartphone-based and tablet-based psychomotor vigilance tests for the assessment of reduced alertness due to sleep deprivation.

PubMed

Grant, Devon A; Honn, Kimberly A; Layton, Matthew E; Riedy, Samantha M; Van Dongen, Hans P A

2017-06-01

The psychomotor vigilance test (PVT) is widely used to measure reduced alertness due to sleep loss. Here, two newly developed, 3-min versions of the psychomotor vigilance test, one smartphone-based and the other tablet-based, were validated against a conventional 10-min laptop-based PVT. Sixteen healthy participants (ages 22-40; seven males, nine females) completed a laboratory study, which included a practice and a baseline day, a 38-h total sleep deprivation (TSD) period, and a recovery day, during which they performed the three different versions of the PVT every 3 h. For each version of the PVT, the number of lapses, mean response time (RT), and number of false starts showed statistically significant changes across the sleep deprivation and recovery days. The number of lapses on the laptop was significantly correlated with the numbers of lapses on the smartphone and tablet. The mean RTs were generally faster on the smartphone and tablet than on the laptop. All three versions of the PVT exhibited a time-on-task effect in RTs, modulated by time awake and time of day. False starts were relatively rare on all three PVTs. For the number of lapses, the effect sizes across 38 h of TSD were large for the laptop PVT and medium for the smartphone and tablet PVTs. These results indicate that the 3-min smartphone and tablet PVTs are valid instruments for measuring reduced alertness due to sleep deprivation and restored alertness following recovery sleep. The results also indicate that the loss of sensitivity on the 3-min PVTs may be mitigated by modifying the threshold defining lapses.

Evaluating lightning hazards to building environments using explicit numerical solutions of Maxwell's equations

NASA Astrophysics Data System (ADS)

Collier, Richard S.; McKenna, Paul M.; Perala, Rodney A.

1991-08-01

The objective here is to describe the lightning hazards to buildings and their internal environments using advanced formulations of Maxwell's Equations. The method described is the Three Dimensional Finite Difference Time Domain Solution. It can be used to solve for the lightning interaction with such structures in three dimensions with the inclusion of a considerable amount of detail. Special techniques were developed for including wire, plumbing, and rebar into the model. Some buildings have provisions for lightning protection in the form of air terminals connected to a ground counterpoise system. It is shown that fields and currents within these structures can be significantly high during a lightning strike. Time lapse video presentations were made showing the electric and magnetic field distributions on selected cross sections of the buildings during a simulated lightning strike.

Evaluating lightning hazards to building environments using explicit numerical solutions of Maxwell's equations

NASA Technical Reports Server (NTRS)

Collier, Richard S.; Mckenna, Paul M.; Perala, Rodney A.

1991-01-01

The objective here is to describe the lightning hazards to buildings and their internal environments using advanced formulations of Maxwell's Equations. The method described is the Three Dimensional Finite Difference Time Domain Solution. It can be used to solve for the lightning interaction with such structures in three dimensions with the inclusion of a considerable amount of detail. Special techniques were developed for including wire, plumbing, and rebar into the model. Some buildings have provisions for lightning protection in the form of air terminals connected to a ground counterpoise system. It is shown that fields and currents within these structures can be significantly high during a lightning strike. Time lapse video presentations were made showing the electric and magnetic field distributions on selected cross sections of the buildings during a simulated lightning strike.

Impact of Twitter intensity, time, and location on message lapse of bluebird's pursuit of fleas in Madagascar.

PubMed

Da'ar, Omar B; Yunus, Faisel; Md Hossain, Nassif; Househ, Mowafa

The recent outbreak of bubonic plague in Madagascar reminds us of the continuing public health challenges posed by such deadly diseases in various parts of the world years after their eradication. This study examines the role of Twitter in public health disease surveillance with special focus on how Twitter intensity, time, and location issues explain Twitter plague message delay. We retrospectively analyzed the Twitter feeds of the 2014 bubonic plague outbreak in Madagascar. The analyses are based on the plague-related data available in the public domain between November 19th and 27th 2014. The data were compiled in March 2015. We calculated the time differential between the tweets and retweets, and analyzed various characteristics of the Tweets including Twitter intensity of the users. A total of 6873 Twitter users were included in the study, of which 52% tweeted plague-related information during the morning hours (before mid-day), and 87% of the tweets came from the west of the epicenter of the plague. More importantly, while session of tweet lease and relative location had effect on message lapse, absolute location did not. Additionally, we found no evidence of differential effect of location on message lapse based on relative location i.e. tweets from west or east nor number of following. However, there is evidence that more intense Twitter use appears to have significant effect on message lapse such that as the number of tweets became more intense, time differential between the tweets and retweets increased while higher number of retweets diminished message lapse. This study affirms that Twitter can play an important role in ongoing disease surveillance and the timely dissemination of information during public health emergencies independent of the time and space restrictions. Further ways should be explored to embed social media channels in routine public health practice. Copyright © 2017 King Saud Bin Abdulaziz University for Health Sciences. Published by Elsevier Ltd. All rights reserved.

VSP Monitoring of CO2 Injection at the Aneth Oil Field in Utah

NASA Astrophysics Data System (ADS)

Huang, L.; Rutledge, J.; Zhou, R.; Denli, H.; Cheng, A.; Zhao, M.; Peron, J.

2008-12-01

Remotely tracking the movement of injected CO2 within a geological formation is critically important for ensuring safe and long-term geologic carbon sequestration. To study the capability of vertical seismic profiling (VSP) for remote monitoring of CO2 injection, a geophone string with 60 levels and 96 channels was cemented into a monitoring well at the Aneth oil field in Utah operated by Resolute Natural Resources and Navajo National Oil and Gas Company. The oil field is located in the Paradox Basin of southeastern Utah, and was selected by the Southwest Regional Partnership on Carbon Sequestration, supported by the U.S. Department of Energy, to demonstrate combined enhanced oil recovery (EOR) and CO2 sequestration. The geophones are placed at depths from 805 m to 1704 m, and the oil reservoir is located approximately from 1731 m to 1786 m in depth. A baseline VSP dataset with one zero-offset and seven offset source locations was acquired in October, 2007 before CO2 injection. The offsets/source locations are approximately 1 km away from the monitoring well with buried geophone string. A time-lapse VSP dataset with the same source locations was collected in July, 2008 after five months of CO2/water injection into a horizontal well adjacent to the monitoring well. The total amount of CO2 injected during the time interval between the two VSP surveys was 181,000 MCF (million cubic feet), or 10,500 tons. The time-lapse VSP data are pre-processed to balance the phase and amplitude of seismic events above the oil reservoir. We conduct wave-equation migration imaging and interferometry analysis using the pre-processed time-lapse VSP data. The results demonstrate that time-lapse VSP surveys with high-resolution migration imaging and scattering analysis can provide reliable information about CO2 migration. Both the repeatability of VSP surveys and sophisticated time-lapse data pre-processing are essential to make VSP as an effective tool for monitoring CO2 injection.

High-elevation amplification of warming since the Last Glacial Maximum in East Africa: New perspectives from biomarker paleotemperature reconstructions

NASA Astrophysics Data System (ADS)

Loomis, S. E.; Russell, J. M.; Kelly, M. A.; Eggermont, H.; Verschuren, D.

2013-12-01

Tropical lapse rate variability on glacial/interglacial time scales has been hotly debated since the publication of CLIMAP in 1976. Low-elevation paleotemperature reconstructions from the tropics have repeatedly shown less warming from the Last Glacial Maximum (LGM) to present than reconstructions from high elevations, leading to widespread difficulty in estimating the true LGM-present temperature change in the tropics. This debate is further complicated by the fact that most paleotemperature estimates from high elevations in the tropics are derived from pollen- and moraine-based reconstructions of altitudinal shifts in vegetation belts and glacial equilibrium line altitudes (ELAs). These traditional approaches rely on the assumption that lapse rates have remained constant through time. However, this assumption is problematic in the case of the LGM, when pervasive tropical aridity most likely led to substantial changes in lapse rates. Glycerol dialkyl glycerol tetraethers (GDGTs) can be used to reconstruct paleotemperatures independent of hydrological changes, making them the ideal proxy to reconstruct high elevation temperature change and assess lapse rate variability through time. Here we present two new equatorial paleotemperature records from high elevations in East Africa (Lake Rutundu, Mt. Kenya and Lake Mahoma, Rwenzori Mountains, Uganda) based on branched GDGTs. Our record from Lake Rutundu shows deglacial warming starting near 17 ka and a mid-Holocene thermal maximum near 5 ka. The overall amplitude of warming in the Lake Rutundu record is 6.8×1.0°C from the LGM to the present, with mid-Holocene temperatures 1.6×0.9°C warmer than modern. Our record from Lake Mahoma extends back to 7 ka and shows similar temperature trends to our record from Lake Rutundu, indicating similar temporal resolution of high-elevation temperature change throughout the region. Combining these new records with three previously published GDGT temperature records from different elevations in East Africa (Sacred Lake, Lake Tanganyika, and Lake Malawi), we are able to reconstruct a continuous record of lapse rates and freezing level heights (FLHs) back to the LGM. We find that tropical lapse rates have varied widely over the last 22 ky, with the largest (lowest) lapse rate (FLH) around the LGM, while the smallest (highest) lapse rate (FLH) occurs during the mid-Holocene, confirming the amplification of warming at high altitudes between the LGM and present. These lapse rate and FLH reconstructions match records of regional hydrological variability, confirming the importance of glacial/interglacial humidity variations on altitudinal temperature gradients in the tropics. Furthermore, the FLH record largely matches records of tropical glacier ELA changes, indicating that warming from LGM-present was likely amplified at high altitudes throughout the tropics.

Induced polarization and self-potential geophysical signature of bacterial activity in porous media (Invited)

NASA Astrophysics Data System (ADS)

Revil, A.

2013-12-01

The first part of the presentation will be dedicated to the spectral induced polarization signature of bacteria in porous media. We developed a quantitative model to investigate frequency-domain induced polarization response of suspensions of bacteria and bacteria growth in porous media. Induced polarization of bacteria (alpha-polarization) is related to the properties of the electrical double layer of the bacteria. Surface conductivity and alpha-polarization are due to the Stern layer of counterions occurring in a brush of polymers coating the surface of the bacteria. These phenomena can be related to the cation exchange capacity of the bacteria. The mobility of the counterions in this Stern layer is found to be very small (4.7×10-10 m2s-1 V-1 at 25°C). This implies a very low relaxation frequency for the alpha-polarization of the bacteria cells (typically around 0.1 to 5 Hertz) in agreement with experimental observations. This new model can be coupled to reactive transport modeling codes in which the evolution of bacterial populations are usually described by Monod kinetics. We show that the growth rate and endogenous decay coefficients of bacteria in a porous sand can be inferred non-intrusively from time lapse frequency-domain induced polarization data. The second part of the presentation will concern the biogeobattery mechanism showing new data, the concept of transient biogeobattery and the influence of the concentration of the electron acceptors in the process.

Financial Barriers and Lapses in Treatment and Care of HIV-Infected Adults in a Southern State in the United States.

PubMed

Wohl, David A; Kuwahara, Rita K; Javadi, Kamran; Kirby, Christine; Rosen, David L; Napravnik, Sonia; Farel, Claire

2017-11-01

Antiretroviral (ARV) adherence has largely been considered from the perspective of an individual's behavior with less attention given to potential structural causes for lapses in treatment, such as the cost of medications and care. HIV medication expense is typically covered by third party payers. However, private insurance premiums and deductibles may rise, or policies terminated such as with a change in employment. Likewise, a patient's eligibility for publicly funded coverage like state AIDS Drug Assistance Programs (ADAP) or Medicaid can also be lost. We conducted a one-time survey of a sample of 300 patients receiving HIV care at a single large academic center in the south of United States to examine lapses in HIV therapy due to financial reasons. We found that during the prior year, financial issues including medication cost or coverage led to a lapse in ARVs in 10% (n = 31) of participants. However, of the 42% (n = 125) participants who had been enrolled in ADAP at any time during the prior year, 21% (n = 26) reported an ARV lapse due to problems with ADAP or medication cost. Respondents cited ADAP's required semi-annual renewal process and other administrative issues as the cause of ARV lapses. The median duration of missed ARVs was 2 weeks (range of <1-23 weeks). Non-HIV medication and transportation to and from clinic costs were also identified as financial burdens to care by respondents. In conclusion, although conducted at a single medical center and one state, this study suggests that a significant minority of HIV-infected patients encounter financial barriers to ARV access, and this is paradoxically more common among those enrolled in the state ADAP. Streamlining, supporting, and simplifying ADAP renewal procedures will likely reduce lapses in ARV adherence and persistence.

Seismoelectric numerical modeling on a grid

USGS Publications Warehouse

Haines, S.S.; Pride, S.R.

2006-01-01

Our finite-difference algorithm provides a new method for simulating how seismic waves in arbitrarily heterogeneous porous media generate electric fields through an electrokinetic mechanism called seismoelectric coupling. As the first step in our simulations, we calculate relative pore-fluid/grain-matrix displacement by using existing poroelastic theory. We then calculate the electric current resulting from the grain/fluid displacement by using seismoelectric coupling theory. This electrofiltration current acts as a source term in Poisson's equation, which then allows us to calculate the electric potential distribution. We can safely neglect induction effects in our simulations because the model area is within the electrostatic near field for the depth of investigation (tens to hundreds of meters) and the frequency ranges (10 Hz to 1 kHz) of interest for shallow seismoelectric surveys.We can independently calculate the electric-potential distribution for each time step in the poroelastic simulation without loss of accuracy because electro-osmotic feedback (fluid flow that is perturbed by generated electric fields) is at least 105 times smaller than flow that is driven by fluid-pressure gradients and matrix acceleration, and is therefore negligible. Our simulations demonstrate that, distinct from seismic reflections, the seismoelectric interface response from a thin layer (at least as thin as one-twentieth of the seismic wavelength) is considerably stronger than the response from a single interface. We find that the interface response amplitude decreases as the lateral extent of a layer decreases below the width of the first Fresnel zone. We conclude, on the basis of our modeling results and of field results published elsewhere, that downhole and/or crosswell survey geometries and time-lapse applications are particularly well suited to the seismoelectric method. ?? 2006 Society of Exploration Geophysicists.

Very-high-resolution time-lapse photography for plant and ecosystems research.

PubMed

Nichols, Mary H; Steven, Janet C; Sargent, Randy; Dille, Paul; Schapiro, Joshua

2013-09-01

Traditional photography is a compromise between image detail and area covered. We report a new method for creating time-lapse sequences of very-high-resolution photographs to produce zoomable images that facilitate observation across a range of spatial and temporal scales. • A robotic camera mount and software were used to capture images of the growth and movement in Brassica rapa every 15 s in the laboratory. The resultant time-lapse sequence (http://timemachine.gigapan.org/wiki/Plant_Growth) captures growth detail such as circumnutation. A modified, solar-powered system was deployed at a remote field site in southern Arizona. Images were collected every 2 h over a 3-mo period to capture the response of vegetation to monsoon season rainfall (http://timemachine.gigapan.org/wiki/Arizona_Grasslands). • A technique for observing time sequences of both individual plant and ecosystem response at a range of spatial scales is available for use in the laboratory and in the field.

Very-high-resolution time-lapse photography for plant and ecosystems research1

PubMed Central

Nichols, Mary H.; Steven, Janet C.; Sargent, Randy; Dille, Paul; Schapiro, Joshua

2013-01-01

• Premise of the study: Traditional photography is a compromise between image detail and area covered. We report a new method for creating time-lapse sequences of very-high-resolution photographs to produce zoomable images that facilitate observation across a range of spatial and temporal scales. • Methods and Results: A robotic camera mount and software were used to capture images of the growth and movement in Brassica rapa every 15 s in the laboratory. The resultant time-lapse sequence (http://timemachine.gigapan.org/wiki/Plant_Growth) captures growth detail such as circumnutation. A modified, solar-powered system was deployed at a remote field site in southern Arizona. Images were collected every 2 h over a 3-mo period to capture the response of vegetation to monsoon season rainfall (http://timemachine.gigapan.org/wiki/Arizona_Grasslands). • Conclusions: A technique for observing time sequences of both individual plant and ecosystem response at a range of spatial scales is available for use in the laboratory and in the field. PMID:25202588

The influence of lapses of attention on working memory capacity.

PubMed

Unsworth, Nash; Robison, Matthew K

2016-02-01

In three experiments, the influence of lapses of attention on working memory (WM) capacity measures was examined. Participants performed various change detection tasks while also reporting whether they were focused on the current task or whether they were unfocused and mind-wandering. Participants reported that they were mind-wandering roughly 27% of the time, and when participants reported mind-wandering, their performance was worse compared to when they reported being on-task. Low WM capacity individuals reported more mind-wandering and lapses of attention than high WM capacity individuals, and mind-wandering and filtering abilities were shown to make independent contributions to capacity estimates. These results provide direct support for the notion that the ability to focus attention on-task and prevent lapses of attention is an important contributor to performance on measures of WM capacity.

Coda Wave Attenuation Characteristics for North Anatolian Fault Zone, Turkey

NASA Astrophysics Data System (ADS)

Sertcelik, Fadime; Guleroglu, Mehmet

2017-10-01

North Anatolian Fault Zone, on which large earthquakes have occurred in the past, migrates regularly from east to west, and it is one of the most active faults in the world. The purpose of this study is to estimate the coda wave quality factor (Qc) for each of the five sub regionsthat were determined according to the fault rupture of these large earthquakes and along the fault. 978 records have been analyzed for 1.5, 3, 6, 9, 12 and 18 Hz frequencies by Single Backscattering Method. Along the fault, the variations in the Qc with lapse time are determined via, Qc = (136±25)f(0.96±0.027), Qc = (208±22)f(0.85±0.02) Qc = (307±28)f(0.72±0.025) at 20, 30, 40 sec lapse times, respectively. The estimated average frequency-dependence quality factor for all lapse time are; Qc(f) = (189±26)f(0.86±0.02) for Karliova-Tokat region; Qc(f) = (216±19)f(0.76±0.018) for Tokat-Çorum region; Qc(f) = (232±18)f(0.76±0.019) for Çorum-Adapazari region; Qc(f) = (280±28)f(0.79±0.021) for Adapazari-Yalova region; Qc(f) = (252±26)f(0.81±0.022) for Yalova-Gulf of Saros region. The coda wave quality factor at all the lapse times and frequencies is Qc(f) = (206±15)f(0.85±0.012) in the study area. The most change of Qc with lapse time is determined at Yalova-Saros region. The result may be related to heterogeneity degree of rapidly decreases towards the deep crust like compared to the other sub region. Moreover, the highest Qc is calculated between Adapazari - Yalova. It was interpreted as a result of seismic energy released by 1999 Kocaeli Earthquake. Besides, it couldn't be established a causal relationship between the regional variation of Qc with frequency and lapse time associated to migration of the big earthquakes. These results have been interpreted as the attenuation mechanism is affected by both regional heterogeneity and consist of a single or multi strands of the fault structure.

Selection of competent blastocysts for transfer by combining time-lapse monitoring and array CGH testing for patients undergoing preimplantation genetic screening: a prospective study with sibling oocytes

PubMed Central

2014-01-01

Background Recent advances in time-lapse monitoring in IVF treatment have provided new morphokinetic markers for embryonic competence. However, there is still very limited information about the relationship between morphokinetic parameters, chromosomal compositions and implantation potential. Accordingly, this study aimed at investigating the effects of selecting competent blastocysts for transfer by combining time-lapse monitoring and array CGH testing on pregnancy and implantation outcomes for patients undergoing preimplantation genetic screening (PGS). Methods A total of 1163 metaphase II (MII) oocytes were retrieved from 138 PGS patients at a mean age of 36.6 ± 2.4 years. These sibling MII oocytes were then randomized into two groups after ICSI: 1) Group A, oocytes (n = 582) were cultured in the time-lapse system and 2) Group B, oocytes (n = 581) were cultured in the conventional incubator. For both groups, whole genomic amplification and array CGH testing were performed after trophectoderm biopsy on day 5. One to two euploid blastocysts within the most predictive morphokinetic parameters (Group A) or with the best morphological grade available (Group B) were selected for transfer to individual patients on day 6. Ongoing pregnancy and implantation rates were compared between the two groups. Results There were significant differences in clinical pregnancy rates between Group A and Group B (71.1% vs. 45.9%, respectively, p = 0.037). The observed implantation rate per embryo transfer significantly increased in Group A compared to Group B (66.2% vs. 42.4%, respectively, p = 0.011). Moreover, a significant increase in ongoing pregnancy rates was also observed in Group A compared to Group B (68.9% vs. 40.5%. respectively, p = 0.019). However, there was no significant difference in miscarriage rate between the time-lapse system and the conventional incubator (3.1% vs. 11.8%, respectively, p = 0.273). Conclusions This is the first prospective investigation using sibling oocytes to evaluate the efficiency of selecting competent blastocysts for transfer by combining time-lapse monitoring and array CGH testing for PGS patients. Our data clearly demonstrate that the combination of these two advanced technologies to select competent blastocysts for transfer results in improved implantation and ongoing pregnancy rates for PGS patients. PMID:24954518

Enhanced characterization of faults and fractures at EGS sites by CO2 injection coupled with active seismic monitoring, pressure-transient testing, and well logging

NASA Astrophysics Data System (ADS)

Oldenburg, C. M.; Daley, T. M.; Borgia, A.; Zhang, R.; Doughty, C.; Jung, Y.; Altundas, B.; Chugunov, N.; Ramakrishnan, T. S.

2016-12-01

Faults and fractures in geothermal systems are difficult to image and characterize because they are nearly indistinguishable from host rock using traditional seismic and well-logging tools. We are investigating the use of CO2 injection and production (push-pull) in faults and fractures for contrast enhancement for better characterization by active seismic, well logging, and push-pull pressure transient analysis. Our approach consists of numerical simulation and feasibility assessment using conceptual models of potential enhanced geothermal system (EGS) sites such as Brady's Hot Spring and others. Faults in the deep subsurface typically have associated damage and gouge zones that provide a larger volume for uptake of CO2 than the slip plane alone. CO2 injected for push-pull well testing has a preference for flowing in the fault and fractures because CO2 is non-wetting relative to water and the permeability of open fractures and fault gouge is much higher than matrix. We are carrying out numerical simulations of injection and withdrawal of CO2 using TOUGH2/ECO2N. Simulations show that CO2 flows into the slip plane and gouge and damage zones and is driven upward by buoyancy during the push cycle over day-long time scales. Recovery of CO2 during the pull cycle is limited because of buoyancy effects. We then use the CO2 saturation field simulated by TOUGH2 in our anisotropic finite difference code from SPICE-with modifications for fracture compliance-that we use to model elastic wave propagation. Results show time-lapse differences in seismic response using a surface source. Results suggest that CO2 can be best imaged using time-lapse differencing of the P-wave and P-to-S-wave scattering in a vertical seismic profile (VSP) configuration. Wireline well-logging tools that measure electrical conductivity show promise as another means to detect and image the CO2-filled fracture near the injection well and potential monitoring well(s), especially if a saline-water pre-flush is carried out to enhance conductivity contrast. Pressure-transient analysis is also carried out to further constrain fault zone characteristics. These multiple complementary characterization approaches are being used to develop working models of fault and fracture zone characteristics relevant to EGS energy recovery.

Voyager image processing at the Image Processing Laboratory

NASA Astrophysics Data System (ADS)

Jepsen, P. L.; Mosher, J. A.; Yagi, G. M.; Avis, C. C.; Lorre, J. J.; Garneau, G. W.

1980-09-01

This paper discusses new digital processing techniques as applied to the Voyager Imaging Subsystem and devised to explore atmospheric dynamics, spectral variations, and the morphology of Jupiter, Saturn and their satellites. Radiometric and geometric decalibration processes, the modulation transfer function, and processes to determine and remove photometric properties of the atmosphere and surface of Jupiter and its satellites are examined. It is exhibited that selected images can be processed into 'approach at constant longitude' time lapse movies which are useful in observing atmospheric changes of Jupiter. Photographs are included to illustrate various image processing techniques.

Voyager image processing at the Image Processing Laboratory

NASA Technical Reports Server (NTRS)

Jepsen, P. L.; Mosher, J. A.; Yagi, G. M.; Avis, C. C.; Lorre, J. J.; Garneau, G. W.

1980-01-01

This paper discusses new digital processing techniques as applied to the Voyager Imaging Subsystem and devised to explore atmospheric dynamics, spectral variations, and the morphology of Jupiter, Saturn and their satellites. Radiometric and geometric decalibration processes, the modulation transfer function, and processes to determine and remove photometric properties of the atmosphere and surface of Jupiter and its satellites are examined. It is exhibited that selected images can be processed into 'approach at constant longitude' time lapse movies which are useful in observing atmospheric changes of Jupiter. Photographs are included to illustrate various image processing techniques.

Noninvasive characterization of the Trecate (Italy) crude-oil contaminated site: links between contamination and geophysical signals.

PubMed

Cassiani, Giorgio; Binley, Andrew; Kemna, Andreas; Wehrer, Markus; Orozco, Adrian Flores; Deiana, Rita; Boaga, Jacopo; Rossi, Matteo; Dietrich, Peter; Werban, Ulrike; Zschornack, Ludwig; Godio, Alberto; JafarGandomi, Arash; Deidda, Gian Piero

2014-01-01

The characterization of contaminated sites can benefit from the supplementation of direct investigations with a set of less invasive and more extensive measurements. A combination of geophysical methods and direct push techniques for contaminated land characterization has been proposed within the EU FP7 project ModelPROBE and the affiliated project SoilCAM. In this paper, we present results of the investigations conducted at the Trecate field site (NW Italy), which was affected in 1994 by crude oil contamination. The less invasive investigations include ground-penetrating radar (GPR), electrical resistivity tomography (ERT), and electromagnetic induction (EMI) surveys, together with direct push sampling and soil electrical conductivity (EC) logs. Many of the geophysical measurements were conducted in time-lapse mode in order to separate static and dynamic signals, the latter being linked to strong seasonal changes in water table elevations. The main challenge was to extract significant geophysical signals linked to contamination from the mix of geological and hydrological signals present at the site. The most significant aspects of this characterization are: (a) the geometrical link between the distribution of contamination and the site's heterogeneity, with particular regard to the presence of less permeable layers, as evidenced by the extensive surface geophysical measurements; and (b) the link between contamination and specific geophysical signals, particularly evident from cross-hole measurements. The extensive work conducted at the Trecate site shows how a combination of direct (e.g., chemical) and indirect (e.g., geophysical) investigations can lead to a comprehensive and solid understanding of a contaminated site's mechanisms.

Selective neuronal lapses precede human cognitive lapses following sleep deprivation.

PubMed

Nir, Yuval; Andrillon, Thomas; Marmelshtein, Amit; Suthana, Nanthia; Cirelli, Chiara; Tononi, Giulio; Fried, Itzhak

2017-12-01

Sleep deprivation is a major source of morbidity with widespread health effects, including increased risk of hypertension, diabetes, obesity, heart attack, and stroke. Moreover, sleep deprivation brings about vehicle accidents and medical errors and is therefore an urgent topic of investigation. During sleep deprivation, homeostatic and circadian processes interact to build up sleep pressure, which results in slow behavioral performance (cognitive lapses) typically attributed to attentional thalamic and frontoparietal circuits, but the underlying mechanisms remain unclear. Recently, through study of electroencephalograms (EEGs) in humans and local field potentials (LFPs) in nonhuman primates and rodents it was found that, during sleep deprivation, regional 'sleep-like' slow and theta (slow/theta) waves co-occur with impaired behavioral performance during wakefulness. Here we used intracranial electrodes to record single-neuron activities and LFPs in human neurosurgical patients performing a face/nonface categorization psychomotor vigilance task (PVT) over multiple experimental sessions, including a session after full-night sleep deprivation. We find that, just before cognitive lapses, the selective spiking responses of individual neurons in the medial temporal lobe (MTL) are attenuated, delayed, and lengthened. These 'neuronal lapses' are evident on a trial-by-trial basis when comparing the slowest behavioral PVT reaction times to the fastest. Furthermore, during cognitive lapses, LFPs exhibit a relative local increase in slow/theta activity that is correlated with degraded single-neuron responses and with baseline theta activity. Our results show that cognitive lapses involve local state-dependent changes in neuronal activity already present in the MTL.

The Mechanosensitive Ca2+ Channel as a Central Regulator of Prostate Tumor Cell Migration and Invasiveness

DTIC Science & Technology

2010-01-01

Use time-lapse videomicroscopy and patch-clamp techniques to characterize the motility of eGFP-transfected PC-3 cells in which MScCa/TRPC1 has been...except for GsmTx-4 (Peptides International, Louisville, KY) and fluorescent agents (Invitrogen/Molecular Probes, Carlsbad, CA). Videomicroscopy ...and Ca2+-imaging. Cell migration was monitored at 37oC by time-lapse videomicroscopy using Nomarski optics with an Epifluorescent microscope (Nikon

Analysis of Electrokinetic Mixing Using AC Electric Field and Patchwise Surface Heterogeneities

NASA Astrophysics Data System (ADS)

Luo, Win-Jet; Yarn, Kao-Feng; Hsu, Shou-Ping

2007-04-01

In this paper, the authors investigate the use of an applied AC electric field and microchannel surface heterogeneities to carry out the microfluidic mixing of two-dimensional, time-dependent electroosmotic flows. The time-dependent flow fields within the microchannel are simulated using the backwards-Euler time-stepping numerical method. The mixing efficiencies obtained in microchannels with two different patchwise surface heterogeneity patterns are investigated. In general, the results show that the application of an AC electric field significantly reduces the required mixing length compared with the use of a DC electric field. Furthermore, the presence of oppositely charged surface heterogeneities on the microchannel walls results in the formation of localized flow circulation regions within the bulk flow. These circulation regions grow and decay periodically in accordance with the periodic variation of the AC electric field intensity and provide an effective means of enhancing species mixing in the microchannel. Consequently, the use of an AC electric field together with patchwise surface heterogeneities permits a significant reduction in both the mixing channel length and the retention time required to attain a homogeneous solution.

Late Pleistocene temperature, hydrology, and glaciation in equatorial East Africa

NASA Astrophysics Data System (ADS)

Russell, J. M.; Verschuren, D.; Kelly, M. A.; Loomis, S. E.; Jackson, M. S.; Morrill, C.; S Sinninghe Damsté, J.; Doughty, A. M.; De Cort, G.; Olago, D.; Street-Perrott, F. A.

2016-12-01

In the coming century the world's high tropical mountains are predicted to experience a magnitude of climate change second only to the Arctic due to amplification of warming with elevation in the tropics. Proxy data suggest that substantial changes in tropical temperature and hydroclimate also occurred during the last deglaciation, the most recent time period when rising atmospheric CO2 concentrations caused large changes in global climate. Determining whether the rate of temperature change with elevation (the lapse rate) was different from today during the Last Glacial Maximum (LGM) is therefore critical to understanding the future of tropical mountain environments and resources. Here we present a new 25,000-year temperature reconstruction based upon organic geochemical analyses of sediment cores from Lake Rutundu (3,078 m asl), Mount Kenya, East Africa. Through comparison with regional reconstructions of lower elevation temperature, we show that LGM cooling was amplified with elevation and hence that the lapse rate was significantly steeper than today. Comparison of our lapse rate reconstructions with equilibrium line altitude reconstructions from glacial moraines indicates that temperature, rather than precipitation, was the dominant control on tropical alpine glacier fluctuations at this time scale. Nevertheless, our results have important implications for the tropical hydrological cycle, as changes in the lapse rate are intimately linked with changes in atmospheric water vapour concentrations. Indeed, we attribute the steeper lapse rate to drying of the tropical ice-age atmosphere, a hypothesis supported by palaeoclimate models. However, comparison of our data to these simulations indicates that state-of-the-art models significantly underestimate tropical temperature changes at high elevation and therefore the lapse-rate change. Consequently, future high-elevation tropical warming may be even greater than currently predicted.

Time-lapse recordings of human corneal epithelial healing.

PubMed

Hardarson, Thorir; Hanson, Charles; Claesson, Margareta; Stenevi, Ulf

2004-04-01

The aim of this study was to design an experimental set-up for the study of human corneal epithelial wound healing in a controlled in vitro situation. A time-lapse set-up was used. This allowed for pictures to be captured with a magnification ranging from x 80 to x 1800. Pictures were captured at 1-min intervals during the observation period, which lasted up to 4 days. Human corneal tissue was obtained from the Eye Bank or from surgery. A small, rounded lesion was produced in the corneal epithelium with a miniature drill. The specimens were placed in a mini-incubator; the camera focused on the epithelial lesion and continuously observed using the time-lapse set-up. The healing process of human corneal epithelium could be followed for several days. The initial healing response could be divided into a slow, a rapid and a consolidating phase. The first two phases lasted about 12 hours, and by then, epithelial cells covered the lesion. Depending on the origin of the tissue and the placement of the lesion, variations in the healing response could be seen. The time-lapse technique makes it possible to study epithelial wound healing over time at the cellular level. Data collected in this way can fill the gap between in vivo studies, where, by nature, human wound healing studies are restricted, and cell culture techniques, where cellular responses in many cases differ from the in vivo situation.

Direct geoelectrical evidence of mass transfer at the laboratory scale

NASA Astrophysics Data System (ADS)

Swanson, Ryan D.; Singha, Kamini; Day-Lewis, Frederick D.; Binley, Andrew; Keating, Kristina; Haggerty, Roy

2012-10-01

Previous field-scale experimental data and numerical modeling suggest that the dual-domain mass transfer (DDMT) of electrolytic tracers has an observable geoelectrical signature. Here we present controlled laboratory experiments confirming the electrical signature of DDMT and demonstrate the use of time-lapse electrical measurements in conjunction with concentration measurements to estimate the parameters controlling DDMT, i.e., the mobile and immobile porosity and rate at which solute exchanges between mobile and immobile domains. We conducted column tracer tests on unconsolidated quartz sand and a material with a high secondary porosity: the zeolite clinoptilolite. During NaCl tracer tests we collected nearly colocated bulk direct-current electrical conductivity (σb) and fluid conductivity (σf) measurements. Our results for the zeolite show (1) extensive tailing and (2) a hysteretic relation between σf and σb, thus providing evidence of mass transfer not observed within the quartz sand. To identify best-fit parameters and evaluate parameter sensitivity, we performed over 2700 simulations of σf, varying the immobile and mobile domain and mass transfer rate. We emphasized the fit to late-time tailing by minimizing the Box-Cox power transformed root-mean square error between the observed and simulated σf. Low-field proton nuclear magnetic resonance (NMR) measurements provide an independent quantification of the volumes of the mobile and immobile domains. The best-fit parameters based on σf match the NMR measurements of the immobile and mobile domain porosities and provide the first direct electrical evidence for DDMT. Our results underscore the potential of using electrical measurements for DDMT parameter inference.

Direct geoelectrical evidence of mass transfer at the laboratory scale

USGS Publications Warehouse

Swanson, Ryan D.; Singha, Kamini; Day-Lewis, Frederick D.; Binley, Andrew; Keating, Kristina; Haggerty, Roy

2012-01-01

Previous field-scale experimental data and numerical modeling suggest that the dual-domain mass transfer (DDMT) of electrolytic tracers has an observable geoelectrical signature. Here we present controlled laboratory experiments confirming the electrical signature of DDMT and demonstrate the use of time-lapse electrical measurements in conjunction with concentration measurements to estimate the parameters controlling DDMT, i.e., the mobile and immobile porosity and rate at which solute exchanges between mobile and immobile domains. We conducted column tracer tests on unconsolidated quartz sand and a material with a high secondary porosity: the zeolite clinoptilolite. During NaCl tracer tests we collected nearly colocated bulk direct-current electrical conductivity (σb) and fluid conductivity (σf) measurements. Our results for the zeolite show (1) extensive tailing and (2) a hysteretic relation between σf and σb, thus providing evidence of mass transfer not observed within the quartz sand. To identify best-fit parameters and evaluate parameter sensitivity, we performed over 2700 simulations of σf, varying the immobile and mobile domain and mass transfer rate. We emphasized the fit to late-time tailing by minimizing the Box-Cox power transformed root-mean square error between the observed and simulated σf. Low-field proton nuclear magnetic resonance (NMR) measurements provide an independent quantification of the volumes of the mobile and immobile domains. The best-fit parameters based on σf match the NMR measurements of the immobile and mobile domain porosities and provide the first direct electrical evidence for DDMT. Our results underscore the potential of using electrical measurements for DDMT parameter inference.

Dirty Snow, Atmospheric Warming, and Climate Feedbacks from Boreal Black Carbon Emissions

NASA Astrophysics Data System (ADS)

Flanner, M. G.; Zender, C. S.; Randerson, J. T.; Jin, Y.

2005-12-01

Black carbon (BC) emitted from boreal fires darkens snow and sea-ice surfaces, increases solar absorption in the atmosphere, and decreases the incident flux at the surface. Although global surface forcing of darkened snow/ice is small relative to atmospheric forcing, the former directly triggers ice-albedo feedback, whereas the latter directly alters the atmospheric lapse rate. This highlights the importance of examining climate feedback strength as well as instantaneous forcings. We used a coupled land-atmosphere GCM (NCAR CAM3) to compare the relative forcings and climate feedbacks of BC emitted from a suite of boreal forest fires over the last decade, accounting for both enhanced snow/ice and atmospheric absorption by BC. The net change in absorbed energy at the surface was about three times greater than the instantaneous surface forcing when BC interactively heated the snow. Timing and location of fires determined the magnitude of darkened snow/ice feedback potential. We also assessed climate feedback strength from BC emitted globally during extreme high and low fire years, including the 1998 fire season.

Dynamic Association between Negative Affect and Alcohol Lapses following Alcohol Treatment

ERIC Educational Resources Information Center

Witkiewitz, Katie; Villarroel, Nadia Aracelliz

2009-01-01

Clinical research has found a strong association between negative affect and returning to alcohol use after a period of abstinence. Yet little is known about the probability of a lapse given a particular level of negative affect or whether there is a reciprocal relationship between negative affect and alcohol use across time. The goal of the…

Understanding hydrothermal circulation patterns at a low-enthalpy thermal spring using audio-magnetotelluric data: A case study from Ireland

NASA Astrophysics Data System (ADS)

Blake, Sarah; Henry, Tiernan; Muller, Mark R.; Jones, Alan G.; Moore, John Paul; Murray, John; Campanyà, Joan; Vozar, Jan; Walsh, John; Rath, Volker

2016-09-01

Kilbrook spring is a thermal spring in east-central Ireland. The temperatures in the spring are the highest recorded for any thermal spring in Ireland (maximum of 25 °C). The temperature is elevated with respect to average Irish groundwater temperatures (9.5-10.5 °C), and represents a geothermal energy potential, which is currently under evaluation. A multi-disciplinary investigation based upon an audio-magnetotelluric (AMT) survey, and hydrochemical analysis including time-lapse temperature and chemistry measurements, has been undertaken with the aims of investigating the provenance of the thermal groundwater and characterising the geological structures facilitating groundwater circulation in the bedrock. The three-dimensional (3-D) electrical resistivity model of the subsurface at Kilbrook spring was obtained by the inversion of AMT impedances and vertical magnetic transfer functions. The model is interpreted alongside high resolution temperature and electrical conductivity measurements, and a previous hydrochemical analysis. The hydrochemical analysis and time-lapse measurements suggest that the thermal waters have a relatively stable temperature and major ion hydrochemistry, and flow within the limestones of the Carboniferous Dublin Basin at all times. The 3-D resistivity model of the subsurface reveals a prominent NNW aligned structure within a highly resistive limestone lithology that is interpreted as a dissolutionally enhanced strike-slip fault, of Cenozoic age. The karstification of this structure, which extends to depths of at least 500 m directly beneath the spring, has provided conduits that facilitate the operation of a relatively deep hydrothermal circulation pattern (likely estimated depths between 560 and 1000 m) within the limestone succession of the Dublin Basin. The results of this study support the hypothesis that the winter thermal maximum and simultaneous increased discharge at Kilbrook spring is the result of rapid infiltration, heating and re-circulation of meteoric waters within this structurally controlled hydrothermal circulation system. This paper illustrates how AMT may be useful in a multi-disciplinary investigation of an intermediate-depth (100-1000 m), low-enthalpy, geothermal target, and shows how the different strands of inquiry from a multi-disciplinary investigation may be woven together to gain a deeper understanding of a complex hydrothermal system.

Time-lapse seismic - repeatability versus usefulness and 2D versus 3D

NASA Astrophysics Data System (ADS)

Landro, M.

2017-12-01

Time-lapse seismic has developed rapidly over the past decades, especially for monitoring of oil and gas reservoirs and subsurface storage of CO2. I will review and discuss some of the critical enabling factors for the commercial success of this technology. It was early realized that how well we are able to repeat our seismic experiment is crucial. However, it is always a question of detectability versus repeatability. For marine seismic, there are several factors limiting the repeatability: Weather conditions, positioning of sources and receivers and so on. I will discuss recent improvements in both acquisition and processing methods over the last decade. It is well known that repeated 3D seismic data is the most accurate tool for reservoir monitoring purposes. However, several examples show that 2D seismic data may be used for monitoring purposes despite lower repeatability. I will use examples from an underground blow out in the North Sea, and repeated 2D seismic lines acquired before and after the Tohoku earthquake in 2011 to illustrate this. A major challenge when using repeated 2D seismic for subsurface monitoring purposes is the lack of 3D calibration points and significantly less amount of data. For marine seismic acquisition, feathering issues and crossline dip effects become more critical compared to 3D seismic acquisition. Furthermore, the uncertainties arising from a non-ideal 2D seismic acquisition are hard to assess, since the 3D subsurface geometry has not been mapped. One way to shed more light on this challenge is to use 3D time lapse seismic modeling testing various crossline dips or geometries. Other ways are to use alternative data sources, such as bathymetry, time lapse gravity or electromagnetic data. The end result for all time-lapse monitoring projects is an interpretation associated with uncertainties, and for the 2D case these uncertainties are often large. The purpose of this talk is to discuss how to reduces and control these uncertainties as much as possible.

Monitoring Kilauea Volcano Using Non-Telemetered Time-Lapse Camera Systems

NASA Astrophysics Data System (ADS)

Orr, T. R.; Hoblitt, R. P.

2006-12-01

Systematic visual observations are an essential component of monitoring volcanic activity. At the Hawaiian Volcano Observatory, the development and deployment of a new generation of high-resolution, non- telemetered, time-lapse camera systems provides periodic visual observations in inaccessible and hazardous environments. The camera systems combine a hand-held digital camera, programmable shutter-release, and other off-the-shelf components in a package that is inexpensive, easy to deploy, and ideal for situations in which the probability of equipment loss due to volcanic activity or theft is substantial. The camera systems have proven invaluable in correlating eruptive activity with deformation and seismic data streams. For example, in late 2005 and much of 2006, Pu`u `O`o, the active vent on Kilauea Volcano`s East Rift Zone, experienced 10--20-hour cycles of inflation and deflation that correlated with increases in seismic energy release. A time-lapse camera looking into a skylight above the main lava tube about 1 km south of the vent showed an increase in lava level---an indicator of increased lava flux---during periods of deflation, and a decrease in lava level during periods of inflation. A second time-lapse camera, with a broad view of the upper part of the active flow field, allowed us to correlate the same cyclic tilt and seismicity with lava breakouts from the tube. The breakouts were accompanied by rapid uplift and subsidence of shatter rings over the tube. The shatter rings---concentric rings of broken rock---rose and subsided by as much as 6 m in less than an hour during periods of varying flux. Time-lapse imagery also permits improved assessment of volcanic hazards, and is invaluable in illustrating the hazards to the public. In collaboration with Hawaii Volcanoes National Park, camera systems have been used to monitor the growth of lava deltas at the entry point of lava into the ocean to determine the potential for catastrophic collapse.

Lava Lake Thermal Pattern Classification Using Self-Organizing Maps and Relationships to Eruption Processes at Kīlauea Volcano, Hawaii

NASA Astrophysics Data System (ADS)

Burzynski, A. M.; Anderson, S. W.; Morrison, K.; LeWinter, A. L.; Patrick, M. R.; Orr, T. R.; Finnegan, D. C.

2014-12-01

Nested within the Halema'uma'u Crater on the summit of Kīlauea Volcano, the active lava lake of Overlook Crater poses hazards to local residents and Hawaii Volcanoes National Park visitors. Since its formation in March 2008, the lava lake has enlarged to +28,500 m2 and has been closely monitored by researchers at the USGS Hawaiian Volcano Observatory (HVO). Time-lapse images, collected via visible and thermal infrared cameras, reveal thin crustal plates, separated by incandescent cracks, moving across the lake surface as lava circulates beneath. We hypothesize that changes in size, shape, velocity, and patterns of these crustal plates are related to other eruption processes at the volcano. Here we present a methodology to identify characteristic lava lake surface patterns from thermal infrared video footage using a self-organizing maps (SOM) algorithm. The SOM is an artificial neural network that performs unsupervised clustering and enables us to visualize the relationships between groups of input patterns on a 2-dimensional grid. In a preliminary trial, we input ~4 hours of thermal infrared time-lapse imagery collected on December 16-17, 2013 during a transient deflation-inflation deformation event at a rate of one frame every 10 seconds. During that same time period, we also acquired a series of one-second terrestrial laser scans (TLS) every 30 seconds to provide detailed topography of the lava lake surface. We identified clusters of characteristic thermal patterns using a self-organizing maps algorithm within the Matlab SOM Toolbox. Initial results from two SOMs, one large map (81 nodes) and one small map (9 nodes), indicate 4-6 distinct groups of thermal patterns. We compare these surface patterns with lava lake surface slope and crustal plate velocities derived from concurrent TLS surveys and with time series of other eruption variables, including outgassing rates and inflation-deflation events. This methodology may be applied to the continuous stream of thermal video footage at Kīlauea to expand the breadth of eruption information we are able to obtain from a remote thermal infrared camera and may potentially allow for the recognition of lava lake patterns as a proxy for other eruption parameters.

Attention lapses in children with spina bifida and hydrocephalus and children with attention-deficit/hyperactivity disorder.

PubMed

De la Torre, Gabriel G; Martin, Alba; Cervantes, Elizabeth; Guil, Rocio; Mestre, Jose M

2017-08-01

Attentional lapses are usually defined as temporary and often brief shifts of attention away from some primary task to unrelated internal information processing. This study addressed the incidence of attention lapses and differences in attentional functioning in 30 children with attention-deficit/hyperactivity disorder (ADHD), 26 healthy children, and 29 children with spina bifida myelomeningocele and hydrocephalus (SBH). Assessments were conducted using computerized tonic and phasic attention tests, the Symbol Digit Modalities Test (SDMT), and the Trail Making Test Form B (TMT-B). The group with SBH differed from normal controls on cognitive measures of attention and executive functions. The ADHD group obtained lower scores than the SBH group and healthy children. ANOVA results showed that there was an effect of shunt revisions and shunt-related infections on neuropsychological performance. Lapses of attention together with reaction time may thus represent important factors for the understanding of cognitive deficits in SBH.

Global dynamics of selective attention and its lapses in primary auditory cortex.

PubMed

Lakatos, Peter; Barczak, Annamaria; Neymotin, Samuel A; McGinnis, Tammy; Ross, Deborah; Javitt, Daniel C; O'Connell, Monica Noelle

2016-12-01

Previous research demonstrated that while selectively attending to relevant aspects of the external world, the brain extracts pertinent information by aligning its neuronal oscillations to key time points of stimuli or their sampling by sensory organs. This alignment mechanism is termed oscillatory entrainment. We investigated the global, long-timescale dynamics of this mechanism in the primary auditory cortex of nonhuman primates, and hypothesized that lapses of entrainment would correspond to lapses of attention. By examining electrophysiological and behavioral measures, we observed that besides the lack of entrainment by external stimuli, attentional lapses were also characterized by high-amplitude alpha oscillations, with alpha frequency structuring of neuronal ensemble and single-unit operations. Entrainment and alpha-oscillation-dominated periods were strongly anticorrelated and fluctuated rhythmically at an ultra-slow rate. Our results indicate that these two distinct brain states represent externally versus internally oriented computational resources engaged by large-scale task-positive and task-negative functional networks.

ARC-1979-A79-7094

NASA Image and Video Library

1979-07-09

Range : 1 million kilometers Voyager 2 completed a dramatic 10 hour time lapse photo sequence to monitor the active volcanos on Jupiter's moon Io following the spacecraft's closest approach to Jupiter. This picture is one of about 200 images that will be used to generate a time lapse motion picture to illustrate Io's volcanic activity. On the bright limb, two of the plumes (P-5 & P-6) discovered in March by Voyager 1 are again visible. The plumes are spewing materials to a height of about 100 kilometers.

Predicting the Initial Lapse Using a Mobile Health Application after Alcohol Detoxification

ERIC Educational Resources Information Center

Chih, Ming-Yuan

2013-01-01

The prediction and prevention of the initial lapse--which is defined as the first lapse after a period of abstinence--is important because the initial lapse often leads to subsequent lapses (within the same lapse episode) or relapse. The prediction of the initial lapse may allow preemptive intervention to be possible. This dissertation reports on…

In Vivo Time-Lapse Imaging in the Zebrafish Lateral Line: A Flexible, Open-Ended Research Project for an Undergraduate Neurobiology Laboratory Course.

PubMed

Marra, Molly H; Tobias, Zachary J C; Cohen, Hannah R; Glover, Greta; Weissman, Tamily A

2015-01-01

The lateral line sensory system in fish detects movements in the water and allows fish to respond to predators, prey, and other stimuli. As the lateral line forms in the first two days of zebrafish development, axons extend caudally along the lateral surface of the fish, eventually forming synapses with hair cells of neuromasts. Growing lateral line axons are located superficially under the skin and can be labeled in living zebrafish using fluorescent protein expression. This system provides a relatively straightforward approach for in vivo time-lapse imaging of neuronal development in an undergraduate setting. Here we describe an upper-level neurobiology laboratory module in which students investigate aspects of axonal development in the zebrafish lateral line system. Students learn to handle and image living fish, collect time-lapse videos of moving mitochondria, and quantitatively measure mitochondrial dynamics by generating and analyzing kymographs of their movements. Energy demands may differ between axons with extending growth cones versus axons that have already reached their targets and are forming synapses. Since relatively little is known about this process in developing lateral line axons, students generate and test their own hypotheses regarding how mitochondrial dynamics may differ at two different time points in axonal development. Students also learn to incorporate into their analysis a powerful yet accessible quantitative tool, the kymograph, which is used to graph movement over time. After students measure and quantify dynamics in living fish at 1 and 2 days post fertilization, this module extends into independent projects, in which students can expand their studies in a number of different, inquiry-driven directions. The project can also be pared down for courses that wish to focus solely on the quantitative analysis (without fish handling), or vice versa. This research module provides a useful approach for the design of open-ended laboratory research projects that integrate the scientific process into undergraduate Biology courses, as encouraged by the AAAS and NSF Vision and Change Initiative.

Attenuation Characteristics of the Armutlu Peninsula (NW Turkey) Using Coda Q

NASA Astrophysics Data System (ADS)

Yavuz, Evrim; Çaka, Deniz; Tunç, Berna; Woith, Heiko; Gottfried Lühr, Birger; Barış, Şerif

2016-04-01

Attenuation characteristic of seismic waves was determined using coda Q in the frame of MARsite (MARsite has received funding from the European Union's Seventh Programme for research, technological development and demonstration under grant agreement No 308417). Data from 82 earthquakes recorded in 2013-2014 in the Armutlu Peninsula and its vicinity by 9 ARNET seismic stations were used for processing. The earthquake magnitudes (Ml) and depths vary from 1.5 to 3.7 and 1.2-16.9 km, respectively. Epicentral distances closer than 90 km were selected to ensure better signal-to-noise ratios. Lapse times between 20 seconds and 40 seconds at intervals of 5 seconds were used for the calculation of the coda wave quality factor. The coda windows were filtered at central frequencies of 1.5, 3, 6, 9 and 12 Hz bandpass filter. To obtain reliable results, only data with signal-to-noise ratios greater than 5 and correlation coefficents higher than 0.7 were used. The SEISAN software and one of its subroutines (CODAQ) were used for data processing and analyses. In the whole study area, Qc=(51±4)f^(0.91±0.04) for 20 seconds, Qc=(77±7)f^(0.80±0.04) for 30 seconds and Qc=(112±13)f^(0.72±0.06) for 40 seconds lapse times are obtained for coda wave quality factor. The observed quality factor is dependent on frequency and lapse time. The results indicate that the upper lithosphere is more heterogeneous and seismically more active than the lower lithosphere as expected in the region which is tectonically complex refering to the effects of the North Anatolian Fault Zone. By considering earthquake clusters and recorded stations, the scattering area was drawn. The intersection of the scattered areas for 20 seconds lapse time is covering all stations. Quality factor in 1 Hz and frequency dependent values were calculated separately and for the intersection of all scattered areas. Calculated Qo and n values of the intersection area are 50 and 0.89, respectively. Hence, the Qo and n values which are calculated using all stations and both values of the intersection area are very close to each other. Additionally, in the detailed review of TRML station which located in Yalova Province Termal District; Qc=(46±3)f^(0.97±0.04) for 20 seconds, Qc=(61±6)f^(1.03±0.06), for 30 seconds and Qc=(74±6)f^(1.06±0.05) for 40 seconds lapse times are obtained for coda wave quality factor. With these results, both the lower Qo values increasing with lapse times demonstrate high tectonic activity. Furthermore, the increasing n value with lapse times is conformable with the geothermal sources, next to the TRML station.

Evaluating the potential for quantitative monitoring of in situ chemical oxidation of aqueous-phase TCE using in-phase and quadrature electrical conductivity

NASA Astrophysics Data System (ADS)

Hort, R. D.; Revil, A.; Munakata-Marr, J.; Mao, D.

2015-07-01

Electrical resistivity measurements can potentially be used to remotely monitor fate and transport of ionic oxidants such as permanganate (MnO4-) during in situ chemical oxidation (ISCO) of contaminants like trichloroethene (TCE). Time-lapse two-dimensional bulk conductivity and induced polarization surveys conducted during a sand tank ISCO simulation demonstrated that MnO4- plume movement could be monitored in a qualitative manner using bulk conductivity tomograms, although chargeability was below sensitivity limits. We also examined changes to in-phase and quadrature electrical conductivity resulting from ion injection, MnO2 and Cl- production, and pH change during TCE and humate oxidation by MnO4- in homogeneous aqueous solutions and saturated porous media samples. Data from the homogeneous samples demonstrated that inversion of the sand tank resistivity data using a common Tikhonov regularization approach was insufficient to recover an accurate conductivity distribution within the tank. While changes to in-phase conductivity could be successfully modeled, quadrature conductivity values could not be directly related to TCE oxidation product or MnO4- concentrations at frequencies consistent with field induced polarization surveys, limiting the utility of quadrature conductivity for monitoring ISCO.

Distortion effects in a switch array UWB radar for time-lapse imaging of human heartbeats

NASA Astrophysics Data System (ADS)

Brovoll, Sverre; Berger, Tor; Aardal, Åyvind; Lande, Tor S.; Hamran, Svein-Erik

2014-05-01

Cardiovascular diseases (CVD) are a major cause of deaths all over the world. Microwave radar can be an alternative sensor for heart diagnostics and monitoring in modern healthcare that aids early detection of CVD symptoms. In this paper measurements from a switch array radar system are presented. This UWB system operates below 3 GHz and does time-lapse imaging of the beating heart inside the human body. The array consists of eight fat dipole elements. With a switch system, every possible sequence of transmit/receive element pairs can be selected to build a radar image from the recordings. To make the radar waves penetrate the human tissue, the antenna array is placed in contact with the body. Removal of the direct signal leakage through the antennas and body surface are done by high-pass (HP) filtering of the data prior to image processing. To analyze the results, measurements of moving spheres in air and simulations are carried out. We see that removal of the direct signal introduces amplitude distortion in the images. In addition, the effect of small target motion between the collection times of data from the individual elements is analyzed. With low pulse repetition frequency (PRF) this motion will distort the image. By using data from real measurements of heart motion in simulations, we analyze how the PRF and the antenna geometry influence this distortions.

Detailed Monitoring of the 43-GHz SiO Maser Emission in S Per

NASA Astrophysics Data System (ADS)

Ostrowski-Fukuda, T. A.; Kemball, A. J.; Stencel, R. E.

2001-12-01

We report the preliminary results of a 3 year project to investigate the processes of SiO masers (v=1, J=1-0) in the extended atmosphere of S Per. Using the Very Long Baseline Array (VLBA) at 43-GHz the SiO masers act as probes of the gas motions and magnetic fields surrounding this late-type supergiant. Several epochs have been reduced and pieced together in a time-lapse movie fashion. This "preview" of the full movie already allows us to follow the motions of the individual maser regions. One of our main goals is to compare and contrast our findings from S Per to other similar stars. We are most interested in learning out about the structure, time evolution, mass-loss process, magnetic field structure, and the physical conditions in the inner regions of these types of stars. Just as in the case of TX Cam, (Diamond & Kemball, 1999), we have also found that our time-lapse images show that the gas motions of S Per are not uniform around the star. This allows us to also speculate that the rate of mass loss may not be the same for all regions of the star's surface. This work is supported by the University of Denver's Menzel Scholarship Fund and in conjunction with the National Radio Astronomy Observatory, Socorro, NM.

37 CFR 1.317 - Lapsed patents; delayed payment of balance of issue fee.

Code of Federal Regulations, 2011 CFR

2011-07-01

... payment of balance of issue fee. 1.317 Section 1.317 Patents, Trademarks, and Copyrights UNITED STATES... Processing Provisions Allowance and Issue of Patent § 1.317 Lapsed patents; delayed payment of balance of... is required at the time the issue fee is paid, any remaining balance of the issue fee is to be paid...

37 CFR 1.317 - Lapsed patents; delayed payment of balance of issue fee.

Code of Federal Regulations, 2010 CFR

2010-07-01

... payment of balance of issue fee. 1.317 Section 1.317 Patents, Trademarks, and Copyrights UNITED STATES... Processing Provisions Allowance and Issue of Patent § 1.317 Lapsed patents; delayed payment of balance of... is required at the time the issue fee is paid, any remaining balance of the issue fee is to be paid...

Investigating carbon flux variability in subtropical peat soils of the Everglades using hydrogeophysical methods

NASA Astrophysics Data System (ADS)

Comas, Xavier; Wright, William

2014-08-01

The spatial and temporal variability in accumulation and release of greenhouse gases (mainly methane and carbon dioxide) to the atmosphere from peat soils remains very uncertain. The use of near-surface geophysical methods such as ground penetrating radar (GPR) has proven useful during the last decade to expand scales of measurement as related to in situ gas distribution and dynamics beyond traditional methods (i.e., gas chambers). However, this approach has focused exclusively on boreal peatlands, while no studies in subtropical systems like the Everglades using these techniques exist. In this paper GPR is combined with gas traps, time-lapse cameras, gas chromatography, and surface deformation measurements to explore biogenic gas dynamics (mainly gas buildup and release) in two locations in the Everglades. Similar to previous studies in northern peatlands, our data in the Everglades show a statistically significant correlation between the following: (1) GPR-estimated gas content and gas fluxes, (2) GPR-estimated gas content and surface deformation, and (3) atmospheric pressure and both GPR-estimated gas content and gas flux. From these results several gas-releasing events ranging between 33.8 and 718.8 mg CH4 m-2 d-1 were detected as identified by the following: (1) decreases in GPR-estimated gas content within the peat matrix, (2) increases in gas fluxes captured by gas traps and time-lapse cameras, and (3) decreases in surface deformation. Furthermore, gas-releasing events corresponded to periods of high atmospheric pressure. Changes in gas accumulation and release were attributed to differences in seasonality and peat soil type between sites. These results suggest that biogenic gas releases in the Everglades are spatially and temporarily variable. For example, flux events measured at hourly scales were up to threefold larger when compared to daily fluxes, therefore suggesting that flux measurements decline when averaged over longer time spans. This research therefore questions what the appropriate spatial and temporal scale of measurement is necessary to properly capture the dynamics of biogenic gas release in subtropical peat soils.

Study of time-lapse processing for dynamic hydrologic conditions. [electronic satellite image analysis console for Earth Resources Technology Satellites imagery

NASA Technical Reports Server (NTRS)

Serebreny, S. M.; Evans, W. E.; Wiegman, E. J.

1974-01-01

The usefulness of dynamic display techniques in exploiting the repetitive nature of ERTS imagery was investigated. A specially designed Electronic Satellite Image Analysis Console (ESIAC) was developed and employed to process data for seven ERTS principal investigators studying dynamic hydrological conditions for diverse applications. These applications include measurement of snowfield extent and sediment plumes from estuary discharge, Playa Lake inventory, and monitoring of phreatophyte and other vegetation changes. The ESIAC provides facilities for storing registered image sequences in a magnetic video disc memory for subsequent recall, enhancement, and animated display in monochrome or color. The most unique feature of the system is the capability to time lapse the imagery and analytic displays of the imagery. Data products included quantitative measurements of distances and areas, binary thematic maps based on monospectral or multispectral decisions, radiance profiles, and movie loops. Applications of animation for uses other than creating time-lapse sequences are identified. Input to the ESIAC can be either digital or via photographic transparencies.

High-throughput microfluidics to control and measure signaling dynamics in single yeast cells

PubMed Central

Hansen, Anders S.; Hao, Nan; O'Shea, Erin K.

2015-01-01

Microfluidics coupled to quantitative time-lapse fluorescence microscopy is transforming our ability to control, measure, and understand signaling dynamics in single living cells. Here we describe a pipeline that incorporates multiplexed microfluidic cell culture, automated programmable fluid handling for cell perturbation, quantitative time-lapse microscopy, and computational analysis of time-lapse movies. We illustrate how this setup can be used to control the nuclear localization of the budding yeast transcription factor Msn2. Using this protocol, we generate oscillations of Msn2 localization and measure the dynamic gene expression response of individual genes in single cells. The protocol allows a single researcher to perform up to 20 different experiments in a single day, whilst collecting data for thousands of single cells. Compared to other protocols, the present protocol is relatively easy to adopt and higher-throughput. The protocol can be widely used to control and monitor single-cell signaling dynamics in other signal transduction systems in microorganisms. PMID:26158443

Time-lapse imaging of disease progression in deep brain areas using fluorescence microendoscopy

PubMed Central

Barretto, Robert P. J.; Ko, Tony H.; Jung, Juergen C.; Wang, Tammy J.; Capps, George; Waters, Allison C.; Ziv, Yaniv; Attardo, Alessio; Recht, Lawrence; Schnitzer, Mark J.

2013-01-01

The combination of intravital microscopy and animal models of disease has propelled studies of disease mechanisms and treatments. However, many disorders afflict tissues inaccessible to light microscopy in live subjects. Here we introduce cellular-level time-lapse imaging deep within the live mammalian brain by one- and two-photon fluorescence microendoscopy over multiple weeks. Bilateral imaging sites allowed longitudinal comparisons within individual subjects, including of normal and diseased tissues. Using this approach we tracked CA1 hippocampal pyramidal neuron dendrites in adult mice, revealing these dendrites' extreme stability (>8,000 day mean lifetime) and rare examples of their structural alterations. To illustrate disease studies, we tracked deep lying gliomas by observing tumor growth, visualizing three-dimensional vasculature structure, and determining microcirculatory speeds. Average erythrocyte speeds in gliomas declined markedly as the disease advanced, notwithstanding significant increases in capillary diameters. Time-lapse microendoscopy will be applicable to studies of numerous disorders, including neurovascular, neurological, cancerous, and trauma-induced conditions. PMID:21240263

Parts-based geophysical inversion with application to water flooding interface detection and geological facies detection

NASA Astrophysics Data System (ADS)

Zhang, Junwei

I built parts-based and manifold based mathematical learning model for the geophysical inverse problem and I applied this approach to two problems. One is related to the detection of the oil-water encroachment front during the water flooding of an oil reservoir. In this application, I propose a new 4D inversion approach based on the Gauss-Newton approach to invert time-lapse cross-well resistance data. The goal of this study is to image the position of the oil-water encroachment front in a heterogeneous clayey sand reservoir. This approach is based on explicitly connecting the change of resistivity to the petrophysical properties controlling the position of the front (porosity and permeability) and to the saturation of the water phase through a petrophysical resistivity model accounting for bulk and surface conductivity contributions and saturation. The distributions of the permeability and porosity are also inverted using the time-lapse resistivity data in order to better reconstruct the position of the oil water encroachment front. In our synthetic test case, we get a better position of the front with the by-products of porosity and permeability inferences near the flow trajectory and close to the wells. The numerical simulations show that the position of the front is recovered well but the distribution of the recovered porosity and permeability is only fair. A comparison with a commercial code based on a classical Gauss-Newton approach with no information provided by the two-phase flow model fails to recover the position of the front. The new approach could be also used for the time-lapse monitoring of various processes in both geothermal fields and oil and gas reservoirs using a combination of geophysical methods. A paper has been published in Geophysical Journal International on this topic and I am the first author of this paper. The second application is related to the detection of geological facies boundaries and their deforation to satisfy to geophysica data and prior distributions. We pose the geophysical inverse problem in terms of Gaussian random fields with mean functions controlled by petrophysical relationships and covariance functions controlled by a prior geological cross-section, including the definition of spatial boundaries for the geological facies. The petrophysical relationship problem is formulated as a regression problem upon each facies. The inversion is performed in a Bayesian framework. We demonstrate the usefulness of this strategy using a first synthetic case study, performing a joint inversion of gravity and galvanometric resistivity data with the stations all located at the ground surface. The joint inversion is used to recover the density and resistivity distributions of the subsurface. In a second step, we consider the possibility that the facies boundaries are deformable and their shapes are inverted as well. We use the level set approach to deform the facies boundaries preserving prior topological properties of the facies throughout the inversion. With the additional help of prior facies petrophysical relationships, topological characteristic of each facies, we make posterior inference about multiple geophysical tomograms based on their corresponding geophysical data misfits. The result of the inversion technique is encouraging when applied to a second synthetic case study, showing that we can recover the heterogeneities inside the facies, the mean values for the petrophysical properties, and, to some extent, the facies boundaries. A paper has been submitted to Geophysics on this topic and I am the first author of this paper. During this thesis, I also worked on the time lapse inversion problem of gravity data in collaboration with Marios Karaoulis and a paper was published in Geophysical Journal international on this topic. I also worked on the time-lapse inversion of cross-well geophysical data (seismic and resistivity) using both a structural approach named the cross-gradient approach and a petrophysical approach. A paper was published in Geophysics on this topic.

Electropermeabilization by uni- or bipolar nanosecond electric pulses: The impact of extracellular conductivity.

PubMed

Gianulis, Elena C; Casciola, Maura; Xiao, Shu; Pakhomova, Olga N; Pakhomov, Andrei G

2018-02-01

Cellular effects caused by nanosecond electric pulses (nsEP) can be reduced by an electric field reversal, a phenomenon known as bipolar cancellation. The reason for this cancellation effect remains unknown. We hypothesized that assisted membrane discharge is the mechanism for bipolar cancellation. CHO-K1 cells bathed in high (16.1mS/cm; HCS) or low (1.8mS/cm; LCS) conductivity solutions were exposed to either one unipolar (300-ns) or two opposite polarity (300+300-ns; bipolar) nsEP (4-40kV/cm) with increasing interpulse intervals (0.1-50μs). Time-lapse YO-PRO-1 (YP) uptake revealed enhanced membrane permeabilization in LCS compared to HCS at all tested voltages. The time-dependence of bipolar cancellation was similar in both solutions, using either identical (22kV/cm) or isoeffective nsEP treatments (12 and 32kV/cm for LCS and HCS, respectively). However, cancellation was significantly stronger in LCS when the bipolar nsEP had no, or very short (<1μs), interpulse intervals. Finally, bipolar cancellation was still present with interpulse intervals as long as 50μs, beyond the time expected for membrane discharge. Our findings do not support assisted membrane discharge as the mechanism for bipolar cancellation. Instead they exemplify the sustained action of nsEP that can be reversed long after the initial stimulus. Copyright © 2017 Elsevier B.V. All rights reserved.

Estimation of Coda Wave Attenuation in Northern Morocco

NASA Astrophysics Data System (ADS)

Boulanouar, Abderrahim; Moudnib, Lahcen El; Padhy, Simanchal; Harnafi, Mimoun; Villaseñor, Antonio; Gallart, Josep; Pazos, Antonio; Rahmouni, Abdelaali; Boukalouch, Mohamed; Sebbani, Jamal

2018-03-01

We studied the attenuation of coda waves and its frequency and lapse-time dependence in northern Morocco. We analysed coda waves of 66 earthquakes recorded in this region during 2008 for four lapse time windows of length 30, 40, 50, and 60 s, and at five frequency bands with central frequency in the range of 0.75-12 Hz. We determined the frequency dependent Q c relation for the horizontal (NS and EW) and vertical (Z) component seismograms. We analyzed three-component broadband seismograms of 66 local earthquakes for determining coda-Q based on the single back-scattering model. The Q c values show strong frequency dependence in 1.5-12 Hz that is related to high degree of heterogeneity of the medium. The lapse time dependence of Q c shows that Q 0 ( Q c at 1 Hz) significantly increases with lapse time that is related to the depth dependence of attenuation and hence of the level of heterogeneity of the medium. The average frequency-dependent Q c( f) values are Qc = (143.75 ± 1.09)f^{(0.864 ± 0.006)}, Qc = (149.12 ± 1.08)f^{(0.85 ± 0.005)} and Qc = (140.42 ± 1.81)f^{(0.902 ± 0.004)} for the vertical, north-south and east-west components of motion, respectively. The frequency-dependent Q c(f) relations are useful for evaluating source parameters (Singh et al. 2001), which are the key inputs for seismic hazard assessment of the region.

Time-lapse microscopy of lung endothelial cells under hypoxia

NASA Astrophysics Data System (ADS)

Mehrvar, Shima; Ghanian, Zahra; Kondouri, Ganesh; Camara, Amadou S.; Ranji, Mahsa

2017-02-01

Objective: This study utilizes fluorescence microscopy to assess the effect of the oxygen tension on the production of reactive oxygen species (ROS) in mitochondria of fetal pulmonary artery endothelial cells (FPAECs). Introduction: Hypoxia is a severe oxygen stress, which mostly causes irreversible injury in lung cells. However, in some studies, it is reported that hypoxia decreases the severity of injuries. In this study, ROS production level was examined in hypoxic FPAECs treated with pentachlorophenol (PCP, uncoupler). This work was accomplished by monitoring and quantifying the changes in the level of the produced ROS in hypoxic cells before and after PCP treatment. Materials and methods: The dynamic of the mitochondrial ROS production in two groups of FPAECs was measured over time using time-lapse microscopy. For the first group, cells were incubated in 3% hypoxic condition for 2 hours and then continuously were exposed to hypoxic condition for imaging as well. For the second group, cells were incubated in normal oxygen condition. Time lapse images of the cells loaded with Mito-SOX (ROS indicator) were acquired, and the red fluorescence intensity profile of the cells was calculated. Changes in the level of the fluorescence intensity profile while they are treated with PCP indicates the dynamics of the ROS level. Results: The intensity profiles of the PCP-treated cells in the first group showed 47% lower ROS production rate than the PCP-treated cells in the second group. Conclusion: Time lapse microscopy revealed that hypoxic cells have lower ROS generation while treated with PCP. Therefore, this result suggests that hypoxia decreased electron transport chain activity in uncoupled chain.

Can arousing feedback rectify lapses in driving? Prediction from EEG power spectra.

PubMed

Lin, Chin-Teng; Huang, Kuan-Chih; Chuang, Chun-Hsiang; Ko, Li-Wei; Jung, Tzyy-Ping

2013-10-01

This study explores the neurophysiological changes, measured using an electroencephalogram (EEG), in response to an arousing warning signal delivered to drowsy drivers, and predicts the efficacy of the feedback based on changes in the EEG. Eleven healthy subjects participated in sustained-attention driving experiments. The driving task required participants to maintain their cruising position and compensate for randomly induced lane deviations using the steering wheel, while their EEG and driving performance were continuously monitored. The arousing warning signal was delivered to participants who experienced momentary behavioral lapses, failing to respond rapidly to lane-departure events (specifically the reaction time exceeded three times the alert reaction time). The results of our previous studies revealed that arousing feedback immediately reversed deteriorating driving performance, which was accompanied by concurrent EEG theta- and alpha-power suppression in the bilateral occipital areas. This study further proposes a feedback efficacy assessment system to accurately estimate the efficacy of arousing warning signals delivered to drowsy participants by monitoring the changes in their EEG power spectra immediately thereafter. The classification accuracy was up 77.8% for determining the need for triggering additional warning signals. The findings of this study, in conjunction with previous studies on EEG correlates of behavioral lapses, might lead to a practical closed-loop system to predict, monitor and rectify behavioral lapses of human operators in attention-critical settings.

Prevalence of human immunodeficiency virus RNA and antibody in first-time, lapsed, and repeat blood donations across five international regions and relative efficacy of alternative screening scenarios.

PubMed

Bruhn, Roberta; Lelie, Nico; Custer, Brian; Busch, Michael; Kleinman, Steven

2013-10-01

Twenty-one blood organizations from five geographical regions provided HIV individual donation (ID)-NAT and serology data on 11,787,610 donations. Infections were classified as anti-HIV-/RNA+ window period (WP), anti-HIV+/RNA+ concordant positive (CP) or anti-HIV+/RNA- elite controller (EC). Residual risk and efficacy of several screening scenarios were estimated for first time, lapsed and repeat donations. WP residual risk estimates assumed a 50% infectious dose of 3.16 virions and a 50% detection limit of 2.7 HIV RNA copies/mL for ID-NAT and 10,000 copies/mL for p24Ag. Infectivity for CP (100%) and EC (2.2%) donations was estimated based on viral load distributions and 100-fold reduced infectivity by antibody neutralization as reported elsewhere. Efficacy was calculated as proportion of transmission risk removed from baseline (i.e. in absence of any screening). There was no significant difference in transmission risk between lapsed and repeat donations in any region. Risk was 3.8-fold higher in first time than combined lapsed/repeat donations in South Africa but not in other regions. Screening strategies were most efficacious at interdicting infectious transfusions in first time (98.7-99.8%) followed by lapsed (97.6-99.7%) and repeat (86.8-97.7%) donations in all regions combined. In each donor category the efficacy of ID-NAT alone (97.7-99.8%) was superior to that of minipool (MP)-NAT/anti-HIV (95.0-99.6%) and p24 Ag/anti-HIV (89.8-99.1%). Efficacy patterns were similar by donor/donation status in each region despite large differences in HIV prevalence and transmission risk. As similar data become available for HBV and HCV, this modeling may be useful in cost effectiveness analyses of alternative testing scenarios. © 2013 American Association of Blood Banks.

Which Triggers Produce the Most Erosive, Frequent, and Longest Runout Turbidity Currents on Deltas?

NASA Astrophysics Data System (ADS)

Hizzett, J. L.; Hughes Clarke, J. E.; Sumner, E. J.; Cartigny, M. J. B.; Talling, P. J.; Clare, M. A.

2018-01-01

Subaerial rivers and turbidity currents are the two most voluminous sediment transport processes on our planet, and it is important to understand how they are linked offshore from river mouths. Previously, it was thought that slope failures or direct plunging of river floodwater (hyperpycnal flow) dominated the triggering of turbidity currents on delta fronts. Here we reanalyze the most detailed time-lapse monitoring yet of a submerged delta; comprising 93 surveys of the Squamish Delta in British Columbia, Canada. We show that most turbidity currents are triggered by settling of sediment from dilute surface river plumes, rather than landslides or hyperpycnal flows. Turbidity currents triggered by settling plumes occur frequently, run out as far as landslide-triggered events, and cause the greatest changes to delta and lobe morphology. For the first time, we show that settling from surface plumes can dominate the triggering of hazardous submarine flows and offshore sediment fluxes.

Time lapse seismic observations and effects of reservoir compressibility at Teal South oil field

NASA Astrophysics Data System (ADS)

Islam, Nayyer

One of the original ocean-bottom time-lapse seismic studies was performed at the Teal South oil field in the Gulf of Mexico during the late 1990's. This work reexamines some aspects of previous work using modern analysis techniques to provide improved quantitative interpretations. Using three-dimensional volume visualization of legacy data and the two phases of post-production time-lapse data, I provide additional insight into the fluid migration pathways and the pressure communication between different reservoirs, separated by faults. This work supports a conclusion from previous studies that production from one reservoir caused regional pressure decline that in turn resulted in liberation of gas from multiple surrounding unproduced reservoirs. I also provide an explanation for unusual time-lapse changes in amplitude-versus-offset (AVO) data related to the compaction of the producing reservoir which, in turn, changed an isotropic medium to an anisotropic medium. In the first part of this work, I examine regional changes in seismic response due to the production of oil and gas from one reservoir. The previous studies primarily used two post-production ocean-bottom surveys (Phase I and Phase II), and not the legacy streamer data, due to the unavailability of legacy prestack data and very different acquisition parameters. In order to incorporate the legacy data in the present study, all three post-stack data sets were cross-equalized and examined using instantaneous amplitude and energy volumes. This approach appears quite effective and helps to suppress changes unrelated to production while emphasizing those large-amplitude changes that are related to production in this noisy (by current standards) suite of data. I examine the multiple data sets first by using the instantaneous amplitude and energy attributes, and then also examine specific apparent time-lapse changes through direct comparisons of seismic traces. In so doing, I identify time-delays that, when corrected for, indicate water encroachment at the base of the producing reservoir. I also identify specific sites of leakage from various unproduced reservoirs, the result of regional pressure blowdown as explained in previous studies; those earlier studies, however, were unable to identify direct evidence of fluid movement. Of particular interest is the identification of one site where oil apparently leaked from one reservoir into a "new" reservoir that did not originally contain oil, but was ideally suited as a trap for fluids leaking from the neighboring spill-point. With continued pressure drop, oil in the new reservoir increased as more oil entered into the reservoir and expanded, liberating gas from solution. Because of the limited volume available for oil and gas in that temporary trap, oil and gas also escaped from it into the surrounding formation. I also note that some of the reservoirs demonstrate time-lapse changes only in the "gas cap" and not in the oil zone, even though gas must be coming out of solution everywhere in the reservoir. This is explained by interplay between pore-fluid modulus reduction by gas saturation decrease and dry-frame modulus increase by frame stiffening. In the second part of this work, I examine various rock-physics models in an attempt to quantitatively account for frame-stiffening that results from reduced pore-fluid pressure in the producing reservoir, searching for a model that would predict the unusual AVO features observed in the time-lapse prestack and stacked data at Teal South. While several rock-physics models are successful at predicting the time-lapse response for initial production, most fail to match the observations for continued production between Phase I and Phase II. Because the reservoir was initially overpressured and unconsolidated, reservoir compaction was likely significant, and is probably accomplished largely by uniaxial strain in the vertical direction; this implies that an anisotropic model may be required. Using Walton's model for anisotropic unconsolidated sand, I successfully model the time-lapse changes for all phases of production. This observation may be of interest for application to other unconsolidated overpressured reservoirs under production.

Gene gun bombardment-mediated expression and translocation of EGFP-tagged GLUT4 in skeletal muscle fibres in vivo.

PubMed

Lauritzen, Hans P M M; Reynet, Christine; Schjerling, Peter; Ralston, Evelyn; Thomas, Stephen; Galbo, Henrik; Ploug, Thorkil

2002-09-01

Cellular protein trafficking has been studied to date only in vitro or with techniques that are invasive and have a low time resolution. To establish a gentle method for analysis of glucose transporter-4 (GLUT4) trafficking in vivo in fully differentiated rat skeletal muscle fibres we combined the enhanced green fluorescent protein (EGFP) labelling technique with physical transfection methods in vivo: intramuscular plasmid injection or gene gun bombardment. During optimisation experiments with plasmid coding for the EGFP reporter alone EGFP-positive muscle fibres were counted after collagenase treatment of in vivo transfected flexor digitorum brevis (FDB) muscles. In contrast to gene gun bombardment, intramuscular injection produced EGFP expression in only a few fibres. Regardless of the transfection technique, EGFP expression was higher in muscles from 2-week-old rats than in those from 6-week-old rats and peaked around 1 week after transfection. The gene gun was used subsequently with a plasmid coding for EGFP linked to the C-terminus of GLUT4 (GLUT4-EGFP). Rats were anaesthetised 5 days after transfection and insulin given i.v. with or without accompanying electrical hindleg muscle stimulation. After stimulation, the hindlegs were fixed by perfusion. GLUT4-EGFP-positive FDB fibres were isolated and analysed by confocal microscopy. The intracellular distribution of GLUT4-EGFP under basal conditions as well as after translocation to the plasma membrane in response to insulin, contractions, or both, was in accordance with previous studies of endogenous GLUT4. Finally, GLUT4-EGFP trafficking in quadriceps muscle in vivo was studied using time-lapse microscopy analysis in anaesthetised mice and the first detailed time-lapse recordings of GLUT4-EGFP translocation in fully differentiated skeletal muscle in vivo were obtained.

Time-lapse imaging of mitosis after siRNA transfection.

PubMed

Mackay, Douglas R; Ullman, Katharine S; Rodesch, Christopher K

2010-06-06

Changes in cellular organization and chromosome dynamics that occur during mitosis are tightly coordinated to ensure accurate inheritance of genomic and cellular content. Hallmark events of mitosis, such as chromosome movement, can be readily tracked on an individual cell basis using time-lapse fluorescence microscopy of mammalian cell lines expressing specific GFP-tagged proteins. In combination with RNAi-based depletion, this can be a powerful method for pinpointing the stage(s) of mitosis where defects occur after levels of a particular protein have been lowered. In this protocol, we present a basic method for assessing the effect of depleting a potential mitotic regulatory protein on the timing of mitosis. Cells are transfected with siRNA, placed in a stage-top incubation chamber, and imaged using an automated fluorescence microscope. We describe how to use software to set up a time-lapse experiment, how to process the image sequences to make either still-image montages or movies, and how to quantify and analyze the timing of mitotic stages using a cell-line expressing mCherry-tagged histone H2B. Finally, we discuss important considerations for designing a time-lapse experiment. This strategy is complementary to other approaches and offers the advantages of 1) sensitivity to changes in kinetics that might not be observed when looking at cells as a population and 2) analysis of mitosis without the need to synchronize the cell cycle using drug treatments. The visual information from such imaging experiments not only allows the sub-stages of mitosis to be assessed, but can also provide unexpected insight that would not be apparent from cell cycle analysis by FACS.

Subsurface lateral preferential flow network revealed by time-lapse ground-penetrating radar in a hillslope

NASA Astrophysics Data System (ADS)

Guo, Li; Chen, Jin; Lin, Henry

2014-12-01

Subsurface lateral preferential flow (LPF) has been observed to contribute substantially to hillslope and catchment runoff. However, the complex nature of LPF and the lack of an appropriate investigation method have hindered direct LPF observation in the field. Thus, the initiation, persistence, and dynamics of LPF networks remain poorly understood. This study explored the application of time-lapse ground-penetrating radar (GPR) together with an artificial infiltration to shed light on the nature of LPF and its dynamics in a hillslope. Based on our enhanced field experimental setup and carefully refined GPR data postprocessing algorithms, we developed a new protocol to reconstruct LPF networks with centimeter resolution. This is the first time that a detailed LPF network and its dynamics have been revealed noninvasively along a hillslope. Real-time soil water monitoring and field soil investigation confirmed the locations of LPF mapped by time-lapse GPR surveys. Our results indicated the following: (1) Increased spatial variations of radar signals after infiltration suggested heterogeneous soil water changes within the studied soil, which reflected the generation and dynamics of LPF; (2) Two types of LPF networks were identified, the network at the location of soil permeability contrasts and that formed via a series of connected preferential flow paths; and (3) The formation and distribution of LPF networks were influenced by antecedent soil water condition. Overall, this study demonstrates clearly that carefully designed time-lapse GPR surveys with enhanced data postprocessing offer a practical and nondestructive way of mapping LPF networks in the field, thereby providing a potentially significant enhancement in our ability to study complex subsurface flow processes across the landscape.

Transient electroosmotic flow induced by AC electric field in micro-channel with patchwise surface heterogeneities.

PubMed

Luo, Win-Jet

2006-03-15

This paper investigates two-dimensional, time-dependent electroosmotic flow driven by an AC electric field via patchwise surface heterogeneities distributed along the micro-channel walls. The time-dependent flow fields through the micro-channel are simulated for various patchwise heterogeneous surface patterns using the backwards-Euler time stepping numerical method. Different heterogeneous surface patterns are found to create significantly different electrokinetic transport phenomena. The transient behavior characteristics of the generated electroosmotic flow are then discussed in terms of the influence of the patchwise surface heterogeneities, the direction of the applied AC electric field, and the velocity of the bulk flow. It is shown that the presence of oppositely charged surface heterogeneities on the micro-channel walls results in the formation of localized flow circulations within the bulk flow. These circulation regions grow and decay periodically in phase with the applied periodic AC electric field intensity. The location and rotational direction of the induced circulations are determined by the directions of the bulk flow velocity and the applied electric field.

Application of ERT, Saline Tracer and Numerical Studies to Delineate Preferential Paths in Fractured Granites.

PubMed

Sreeparvathy, Vijay; Kambhammettu, B V N P; Peddinti, Srinivasa Rao; Sarada, P S L

2018-03-22

Accurate quantification of in situ heterogeneity and flow processes through fractured geologic media remains elusive for hydrogeologists due to the complexity in fracture characterization and its multiscale behavior. In this research, we demonstrated the efficacy of tracer-electrical resistivity tomography (ERT) experiments combined with numerical simulations to characterize heterogeneity and delineate preferential flow paths in a fractured granite aquifer. A series of natural gradient saline tracer experiments were conducted from a depth window of 18 to 22 m in an injection well (IW) located inside the Indian Institute of Technology Hyderabad campus. Tracer migration was monitored in a time-lapse mode using two cross-sectional surface ERT profiles placed in the direction of flow gradient. ERT data quality was improved by considering stacking, reciprocal measurements, resolution indicators, and geophysical logs. Dynamic changes in subsurface electrical properties inferred via resistivity anomalies were used to highlight preferential flow paths of the study area. Temporal changes in electrical resistivity and tracer concentration were monitored along the vertical in an observation well located at 48 m to the east of the IW. ERT-derived tracer breakthrough curves were in agreement with geochemical sample measurements. Fracture geometry and hydraulic properties derived from ERT and pumping tests were further used to evaluate two mathematical conceptualizations that are relevant to fractured aquifers. Results of numerical analysis conclude that dual continuum model that combines matrix and fracture systems through a flow exchange term has outperformed equivalent continuum model in reproducing tracer concentrations at the monitoring wells (evident by a decrease in RMSE from 199 to 65 mg/L). A sensitivity analysis on model simulations conclude that spatial variability in hydraulic conductivity, local-scale dispersion, and flow exchange at fracture-matrix interface have a profound effect on model simulations. © 2018, National Ground Water Association.

Soil-plant interaction monitoring: Small scale example of an apple orchard in Trentino, North-Eastern Italy.

PubMed

Cassiani, Giorgio; Boaga, Jacopo; Rossi, Matteo; Putti, Mario; Fadda, Giuseppe; Majone, Bruno; Bellin, Alberto

2016-02-01

Accurate monitoring and modeling of soil-plant systems are a key unresolved issue that currently limits the development of a comprehensive view of the interactions between soil and atmosphere, with a number of practical consequences including the difficulties in predicting climatic change patterns. This paper presents a case study where time-lapse minimal-invasive 3D micro-electrical tomography (ERT) is used to monitor rhizosphere eco-hydrological processes in an apple orchard in the Trentino region, Northern Italy. In particular we aimed at gaining a better understanding of the soil-vegetation water exchanges in the shallow critical zone, as part of a coordinated effort towards predicting climate-induced changes on the hydrology of Mediterranean basins (EU FP7 CLIMB project). The adopted strategy relied upon the installation of a 3D electrical tomography apparatus consisting of four mini-boreholes carrying 12 electrodes each plus 24 mini-electrodes on the ground surface, arranged in order to image roughly a cubic meter of soil surrounding a single apple tree. The monitoring program was initially tested with repeated measurements over about one year. Subsequently, we performed three controlled irrigation tests under different conditions, in order to evaluate the water redistribution under variable root activities and climatic conditions. Laboratory calibration on soil samples allowed us to translate electrical resistivity variations into moisture content changes, supported also by in-situ TDR measurements. Richards equation modeling was used also to explain the monitoring evidence. The results clearly identified the effect of root water uptake and the corresponding subsoil region where active roots are present, but also marked the need to consider the effects of different water salinity in the water infiltration process. We also gained significant insight about the need to measure quantitatively the plant evapotranspiration in order to close the water balance and separate soil structure effects (primarily, hydraulic conductivity) from water dynamics induced by living plants. Copyright © 2015 Elsevier B.V. All rights reserved.

Elevation-dependent changes in n-alkane δD and soil GDGTs across the South Central Andes

NASA Astrophysics Data System (ADS)

Nieto-Moreno, Vanesa; Rohrmann, Alexander; van der Meer, Marcel T. J.; Sinninghe Damsté, Jaap S.; Sachse, Dirk; Tofelde, Stefanie; Niedermeyer, Eva M.; Strecker, Manfred R.; Mulch, Andreas

2016-11-01

Surface uplift of large plateaus may significantly influence regional climate and more specifically precipitation patterns and temperature, sometimes complicating paleoaltimetry interpretations. Thus, understanding the topographic evolution of tectonically active mountain belts benefits from continued development of reliable proxies to reduce uncertainties in paleoaltimetry reconstructions. Lipid biomarker-based proxies provide a novel approach to stable isotope paleoaltimetry and complement authigenic or pedogenic mineral proxy materials, in particular outside semi-arid climate zones where soil carbonates are not abundant but (soil) organic matter has a high preservation potential. Here we present δD values of soil-derived n-alkanes and mean annual air temperature (MAT) estimates based on branched glycerol dialkyl glycerol tetraether (brGDGT) distributions to assess their potential for paleoelevation reconstructions in the southern central Andes. We analyzed soil samples across two environmental and hydrological gradients that include a hillslope (26-28°S) and a valley (22-24°S) transect on the windward flanks of Central Andean Eastern Cordillera in NW Argentina. Our results show that present-day n-alkane δD values and brGDGT-based MAT estimates are both linearly related with elevation and in good agreement with present-day climate conditions. Soil n-alkanes show a δD lapse rate (Δ (δD)) of - 1.64 ‰ / 100 m (R2 = 0.91, p < 0.01) at the hillslope transect, within the range of δD lapse rates from precipitation and surface waters in other tropical regions in the Andes like the Eastern Cordillera in Colombia and Bolivia and the Equatorial and Peruvian Andes. BrGDGT-derived soil temperatures are similar to monitored winter temperatures in the region and show a lapse rate of ΔT = - 0.51 °C / 100 m (R2 = 0.91, p < 0.01), comparable with lapse rates from in situ soil temperature measurements, satellite-derived land-surface temperatures at this transect, and weather stations from the Eastern Cordillera at similar latitude. As a result of an increasing leeward sampling position along the valley transect lapse rates are biased towards lower values and display higher scatter (Δ (δD) = - 0.95 ‰ / 100 m, R2 = 0.76, p < 0.01 and ΔT = - 0.19 °C / 100 m, R2 = 0.48, p < 0.05). Despite this higher complexity, they are in line with lapse rates from stream-water samples and in situ soil temperature measurements along the same transect. Our results demonstrate that both soil n-alkane δD values and MAT reconstructions based on brGDGTs distributions from the hillslope transect (Δ (δD) = - 1.64 ‰ / 100 m, R2 = 0.91, p < 0.01 and ΔT = - 0.51 °C / 100 m, R2 = 0.91, p < 0.01) track the direct effects of orography on precipitation and temperature and hence the combined effects of local and regional hydrology as well as elevation.

Surface electric fields for North America during historical geomagnetic storms

USGS Publications Warehouse

Wei, Lisa H.; Homeier, Nichole; Gannon, Jennifer L.

2013-01-01

To better understand the impact of geomagnetic disturbances on the electric grid, we recreate surface electric fields from two historical geomagnetic storms—the 1989 “Quebec” storm and the 2003 “Halloween” storms. Using the Spherical Elementary Current Systems method, we interpolate sparsely distributed magnetometer data across North America. We find good agreement between the measured and interpolated data, with larger RMS deviations at higher latitudes corresponding to larger magnetic field variations. The interpolated magnetic field data are combined with surface impedances for 25 unique physiographic regions from the United States Geological Survey and literature to estimate the horizontal, orthogonal surface electric fields in 1 min time steps. The induced horizontal electric field strongly depends on the local surface impedance, resulting in surprisingly strong electric field amplitudes along the Atlantic and Gulf Coast. The relative peak electric field amplitude of each physiographic region, normalized to the value in the Interior Plains region, varies by a factor of 2 for different input magnetic field time series. The order of peak electric field amplitudes (largest to smallest), however, does not depend much on the input. These results suggest that regions at lower magnetic latitudes with high ground resistivities are also at risk from the effect of geomagnetically induced currents. The historical electric field time series are useful for estimating the flow of the induced currents through long transmission lines to study power flow and grid stability during geomagnetic disturbances.

Study of Osteoclast Adhesion to Cortical Bone Surfaces: A Correlative Microscopy Approach for Concomitant Imaging of Cellular Dynamics and Surface Modifications

PubMed Central

2015-01-01

Bone remodeling relies on the coordinated functioning of osteoblasts, bone-forming cells, and osteoclasts, bone-resorbing cells. The effects of specific chemical and physical bone features on the osteoclast adhesive apparatus, the sealing zone ring, and their relation to resorption functionality are still not well-understood. We designed and implemented a correlative imaging method that enables monitoring of the same area of bone surface by time-lapse light microscopy, electron microscopy, and atomic force microscopy before, during, and after exposure to osteoclasts. We show that sealing zone rings preferentially develop around surface protrusions, with lateral dimensions of several micrometers, and ∼1 μm height. Direct overlay of sealing zone rings onto resorption pits on the bone surface shows that the rings adapt to pit morphology. The correlative procedure presented here is noninvasive and performed under ambient conditions, without the need for sample labeling. It can potentially be applied to study various aspects of cell-matrix interactions. PMID:26682493

Forcing Mechanisms for the Variations of Near-surface Temperature Lapse Rates along the Himalayas, Tibetan Plateau (HTP) and Their Surroundings

NASA Astrophysics Data System (ADS)

Kattel, D. B.; Yao, T.; Ullah, K.; Islam, G. M. T.

2016-12-01

This study investigates the monthly characteristics of near-surface temperature lapse rates (TLRs) (i.e., governed by surface energy balance) based on the 176 stations 30-year (1980 to 2010) dataset covering a wide range of topography, climatic regime and relief (4801 m) in the HTP and its surroundings. Empirical analysis based on techniques in thermodynamics and hydrostatic system were used to obtain the results. Steepest TLRs in summer is due to strong dry convection and shallowest in winter is due to inversion effect is the general pattern of TLR that reported in previous studies in other mountainous region. Result of this study reports a contrast variation of TLRs from general patterns, and suggest distinct forcing mechanisms in an annual cycle. Shallower lapse rate occurs in summer throughout the regions is due to strong heat exchange process within the boundary layer, corresponding to the warm and moist atmospheric conditions. There is a systematic differences of TLRs in winter between the northern and southern slopes the Himalayas. Steeper TLRs in winter on the northern slopes is due to intense cooling at higher elevations, corresponding to the continental dry and cold air surges, and considerable snow-temperature feedback. The differences in elevation and topography, as well as the distinct variation of turbulent heating and cooling, explain the contrast TLRs (shallower) values in winter on the southern slopes. Distinct diurnal variations of TLRs and its magnitudes between alpine, dry, humid and coastal regions is due to the variations of adiabatic mixing during the daytime in the boundary layer i.e., associated with the variations in net radiations, elevation, surface roughness and sea surface temperature. The findings of this study is useful to determine the temperature range for accurately modelling in various field such as hydrology, glaciology, ecology, forestry, agriculture, as well as inevitable for climate downscaling in complex mountainous terrain.

Improvement of 2D ERT measurements conducted along a small earth-filled dyke using 3D topographic data and 3D computation of geometric factors

NASA Astrophysics Data System (ADS)

Bièvre, Grégory; Oxarango, Laurent; Günther, Thomas; Goutaland, David; Massardi, Michael

2018-06-01

In the framework of earth-filled dykes characterization and monitoring, Electrical Resistivity Tomography (ERT) turns out to be a commonly used method. 2D sections are generally acquired along the dyke crest thus putting forward the question of 3D artefacts in the inversion process. This paper proposes a methodology based on 3D direct numerical simulations of the ERT acquisition using a realistic topography of the study site. It allows computing ad hoc geometrical factors which can be used for the inversion of experimental ERT data. The method is first evaluated on a set of synthetic dyke configurations. Then, it is applied to experimental static and time-lapse ERT data set acquired before and after repair works carried out on a leaking zone of an earth-filled canal dyke in the centre of France. The computed geometric factors are lower than the analytic geometric factors in a range between -8% and - 18% for measurements conducted on the crest of the dyke. They exhibit a maximum under-estimation for intermediate electrode spacings in the Wenner and Schlumberger configurations. In the same way, for measurements conducted on the mid-slope of the dyke, the computed geometric factors are higher for short electrode spacings (+18%) and lower for lower for large electrode spacings (-8%). The 2D inversion of the synthetic data with these computed geometric factors provides a significant improvement of the agreement with the original resistivity. Two experimental profiles conducted on the same portion of the dyke but at different elevations also reveal a better agreement using this methodology. The comparison with apparent resistivity from EM31 profiling along the stretch of the dyke also supports this evidence. In the same way, some spurious effects which affected the time-lapse data were removed and improved the global readability of the time-lapse resistivity sections. The benefit on the structural interpretation of ERT images remains moderate but allows a better delineation of the repair work location. Therefore, and even if the 2D assumption cannot be considered valid in such a context, the proposed methodology could be applied easily to any dyke or strongly 3D-shaped structure using a realistic topographic model. It appears suitable for practical application.

A software solution for recording circadian oscillator features in time-lapse live cell microscopy.

PubMed

Sage, Daniel; Unser, Michael; Salmon, Patrick; Dibner, Charna

2010-07-06

Fluorescent and bioluminescent time-lapse microscopy approaches have been successfully used to investigate molecular mechanisms underlying the mammalian circadian oscillator at the single cell level. However, most of the available software and common methods based on intensity-threshold segmentation and frame-to-frame tracking are not applicable in these experiments. This is due to cell movement and dramatic changes in the fluorescent/bioluminescent reporter protein during the circadian cycle, with the lowest expression level very close to the background intensity. At present, the standard approach to analyze data sets obtained from time lapse microscopy is either manual tracking or application of generic image-processing software/dedicated tracking software. To our knowledge, these existing software solutions for manual and automatic tracking have strong limitations in tracking individual cells if their plane shifts. In an attempt to improve existing methodology of time-lapse tracking of a large number of moving cells, we have developed a semi-automatic software package. It extracts the trajectory of the cells by tracking theirs displacements, makes the delineation of cell nucleus or whole cell, and finally yields measurements of various features, like reporter protein expression level or cell displacement. As an example, we present here single cell circadian pattern and motility analysis of NIH3T3 mouse fibroblasts expressing a fluorescent circadian reporter protein. Using Circadian Gene Express plugin, we performed fast and nonbiased analysis of large fluorescent time lapse microscopy datasets. Our software solution, Circadian Gene Express (CGE), is easy to use and allows precise and semi-automatic tracking of moving cells over longer period of time. In spite of significant circadian variations in protein expression with extremely low expression levels at the valley phase, CGE allows accurate and efficient recording of large number of cell parameters, including level of reporter protein expression, velocity, direction of movement, and others. CGE proves to be useful for the analysis of widefield fluorescent microscopy datasets, as well as for bioluminescence imaging. Moreover, it might be easily adaptable for confocal image analysis by manually choosing one of the focal planes of each z-stack of the various time points of a time series. CGE is a Java plugin for ImageJ; it is freely available at: http://bigwww.epfl.ch/sage/soft/circadian/.

Preliminary observations on polar body extrusion and pronuclear formation in human oocytes using time-lapse video cinematography.

PubMed

Payne, D; Flaherty, S P; Barry, M F; Matthews, C D

1997-03-01

In this study, we have used time-lapse video cinematography to study fertilization in 50 human oocytes that had undergone intracytoplasmic sperm injection (ICSI). Time-lapse recording commenced shortly after ICSI and proceeded for 17-20 h. Oocytes were cultured in an environmental chamber which was maintained under standard culture conditions. Overall, 38 oocytes (76%) were fertilized normally, and the fertilization rate and embryo quality were not significantly different from 487 sibling oocytes cultured in a conventional incubator. Normal fertilization followed a defined course of events, although the timing of these events varied markedly between oocytes. In 35 of the 38 fertilized oocytes (92%), there were circular waves of granulation within the ooplasm which had a periodicity of 20-53 min. The sperm head decondensed during this granulation phase. The second polar body was then extruded, and this was followed by the central formation of the male pronucleus. The female pronucleus formed in the cytoplasm adjacent to the second polar body at the same time as, or slightly after, the male pronucleus, and was subsequently drawn towards the male pronucleus until the two abutted. Both pronuclei then increased in size, the nucleoli moved around within the pronuclei and some nucleoli coalesced. During pronuclear growth, the organelles contracted from the cortex towards the centre of the oocyte, leaving a clear cortical zone. The oocyte decreased in diameter from 112 to 106 microm (P < 0.0001) during the course of the observation period. The female pronucleus was significantly smaller in diameter than the male pronucleus (24.1 and 22.4 microm respectively, P = 0.008) and contained fewer nucleoli (4.2 and 7.0 respectively, P < 0.0001). After time-lapse recording, oocytes were cultured for 48 h prior to embryo transfer or cryopreservation. Embryo quality was related to fertilization events and periodicity of the cytoplasmic wave, and it was found that good quality embryos arose from oocytes that had more uniform timing from injection to pronuclear abuttal and tended to have a longer cytoplasmic wave. In conclusion, we have shown that time-lapse video cinematography is an excellent tool for studying fertilization and early embryo development, and have demonstrated that human fertilization comprises numerous complex dynamic events.

Momentary changes in craving predict smoking lapse behavior: a laboratory study.

PubMed

Motschman, Courtney A; Germeroth, Lisa J; Tiffany, Stephen T

2018-04-27

Current research on factors that predict smoking lapse behavior is limited in its ability to fully characterize the critical moments leading up to decisions to smoke. We used a validated and widely used experimental analogue for smoking lapse to assess how moment-to-moment dynamics of craving relate to decisions to smoke. Heavy smokers (N = 128, M age = 35.9) participated in a 50-min laboratory delay to smoking task on 2 consecutive days, earning money for each 5 min they remained abstinent or ending the task by choosing to smoke. Participants rated craving and negative affect levels immediately prior to each choice. Participants were randomized to smoking as usual (n = 50) or overnight abstinence (n = 50 successfully abstained, n = 22 failed abstaining) prior to session 2. Discrete-time hazard models were used to examine craving and negative affect as time-varying predictors of smoking. Higher craving levels prior to smoking opportunities predicted increased risk of smoking. When controlling for craving levels, incremental increases in craving predicted increased smoking risk. Increases in negative affect incrementally predicted increased smoking risk at session 2 only. Smokers who failed to abstain were at a higher risk of smoking than those who successfully abstained, whereas abstinent and non-abstinent smokers did not differ in smoking risk. Findings demonstrate an extension of the smoking lapse paradigm that can be utilized to capture momentary changes in craving that predict smoking behavior. Evaluations of nuanced craving experiences may inform clinical and pharmacological research on preventing smoking lapse and relapse.

Joint Use of ERT, Tracer, and Numerical Techniques to Image Preferential Flow Paths in a Fractured Granite Aquifer

NASA Astrophysics Data System (ADS)

Sanaga, S.; Vijay, S.; Kbvn, P.; Peddinti, S. R.; P S L, S.

2017-12-01

Fractured geologic media poses formidable challenges to hydrogeologists due of the strenuous mapping of fracture-matrix system and quantification of flow and transport processes. In this research, we demonstrated the efficacy of tracer-ERT studies coupled with numerical simulations to delineate preferential flow paths in a fractured granite aquifer of Deccan traps in India. A series of natural gradient saline tracer experiments were conducted from a depth window of 18 to 22 m in an injection well located inside the IIT Hyderabad campus. Tracer migration was monitored in a time-lapse mode using two cross-sectional surface ERT profiles placed in the direction of flow gradient. Dynamic changes in sub-surface electrical properties inferred via resistivity anomalies were used to highlight preferential flow paths of the study area. ERT-derived tracer breakthrough curves were in agreement with geochemical sample measurements (R2=0.74). Fracture geometry and hydraulic properties derived from ERT and pumping tests were then used to evaluate two mathematical conceptualizations that are relevant to fractured aquifers. Results of numerical analysis conclude that a dual continuum model that combines matrix and fracture systems through a flow exchange term has outperformed equivalent continuum model in reproducing tracer concentrations at the monitoring wells (evident by decrease in RMSE from 199 mg/l to 65 mg/l). A sensitivity analysis of the model parameters reveals that spatial variability in hydraulic conductivity, local-scale dispersion, and flow exchange at fracture-matrix interface have a profound effect on model simulations. Keywords: saline tracer, ERT, fractured granite, groundwater, preferential flow, numerical simulation

Monitoring of well integrity by magnetic imaging defectoscopy (MID) at the Ketzin pilot site, Germany

NASA Astrophysics Data System (ADS)

Zemke, Kornelia; Liebscher, Axel; Möller, Fabian

2017-04-01

One of the key requirements for safe CO2 storage operation is to ensure wellbore integrity. The CO2 triggered acid in-well environment may lead to pitting and/or surface corrosion and eventually to fatigue of well casings and cementation by this giving raise to wellbore leakage. Corrosion effects are conventionally monitored by measurement of inner casing surface, internal diameter and wall thickness. Caliper logging provides inner surface and internal diameter data while ultrasonic tools measure both the internal diameter and casing thickness as well as the bonding between casing and cement. However, both tools can only monitor and characterize the most inner casing and ultrasonic tools in addition can only be applied in fluid filled wells. At the Ketzin CO2 storage test site, Germany, about 67 kt of CO2 were injected between June 2008 and August 2013 and an interdisciplinary monitoring concept was developed with focus on the storage complex, the overburden, the surface and the wellbores. Four deep wells penetrate the reservoir and their integrity has been monitored by a combination of video inspection, pulsed neutron gamma logging PNG and magnetic imaging defectoscopy MID. MID is an advanced logging method for non-destructive testing and has the great advantages that it can be operated in gas filled boreholes and that it provides information also for outer casings. The MID tool generates electromagnetic pulsed transient eddy currents and records the response of the surrounding media. The distribution and strength of the eddy-currents is then converted into averaged, depth-resolved thicknesses of the individual casings. Run in time-lapse mode, MID provides a measure to detect changes in casing thickness and therefore hints to corrosion. At Ketzin, the four deep wells haven been monitored by repeat MID logging on a roughly annual basis in cooperation with VNG Gasspeicher GmbH (VGS) and GAZPROMENERGODIAGNOSTIKA, applying their in-house MID tool. The MID based depth-resolved casing thickness data clearly image the thickness of at least the two innermost casings and the depth positions of the pipe-connectors and of all downhole installations in perfect agreement with depth data from the drilling reports. Also the transition from steel casing to glass fiber reinforced casing in well Ktzi 203 is well resolved. The MID derived casing thicknesses are within the production specifications and also confirm to the API standards. Comparison between the different time-lapse data sets provides no hints to time dependent changes in casing thickness or to any other signs of corrosion. These results agree with the video inspection of the wells and the investigation of in-situ samples of pulled casing material recovered during abandoned of well Ktzi 202. The Ketzin time-lapse MID data set provides unique field experience on applicability of MID monitoring and longevity of wellbore steel casing under real CO2 storage environment. It thereby substantially improves our knowledge on CCS safety assessment due to the key role of well integrity during the entire storage lifecycle.

Lapse in embryo transfer training does not negatively affect clinical pregnancy rates for reproductive endocrinology and infertility fellows.

PubMed

Kresowik, Jessica; Sparks, Amy; Duran, Eyup H; Shah, Divya K

2015-03-01

To compare rates of clinical pregnancy (CPR) and live birth (LBR) following embryo transfer (ET) performed by reproductive endocrinology and infertility (REI) fellows before and after a prolonged lapse in clinical training due to an 18-month research rotation. Retrospective cohort study. Not applicable. All women undergoing in vitro fertilization (IVF) and IVF-intracytoplasmic sperm injection (ICSI) cycles with ET performed by REI fellows from August 2003 to July 2012. Eighteen-month lapse in clinical training of REI fellows. CPR and LBR before and after the lapse in clinical training were calculated and compared per fellow and as a composite group. Alternating logistic regression models were used to calculate the odds of clinical pregnancy and live birth following transfers performed before and after the lapse in training. Unadjusted odds of clinical pregnancy and live birth were similar between the two time periods both for individual fellows and for the composite group. Alternate logistic regression analysis revealed no significant difference in CPR (odds ratio [OR] 0.94, 95% confidence interval [CI] 0.83-1.07) or LBR (OR 1.05, 95% CI 0.94-1.18) after the lapse in training compared with before. A research rotation is common in REI fellowship training programs. This prolonged departure from clinical training does not appear to negatively affect pregnancy outcome following fellow ET. Copyright © 2015 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

Resolving precipitation-induced water content profiles through inversion of dispersive GPR data

NASA Astrophysics Data System (ADS)

Mangel, A. R.; Moysey, S. M.; Van Der Kruk, J.

2015-12-01

Ground-penetrating radar (GPR) has become a popular tool for monitoring hydrologic processes. When monitoring infiltration, the thin wetted zone that occurs near the ground surface at early times may act as a dispersive waveguide. This low-velocity layer traps the GPR waves, causing specific frequencies of the signal to travel at different phase velocities, confounding standard traveltime analysis. In a previous numerical study we demonstrated the potential of dispersion analysis for estimating the depth distribution of waveguide water contents. Here, we evaluate the effectiveness of the methodology when applying it to experimental time-lapse dispersive GPR data collected during a laboratory infiltration experiment in a relatively homogenous soil. A large sand-filled tank is equipped with an automated gantry to independently control the position of 1000 MHz source and receiver antennas. The system was programmed to repeatedly collect a common mid-point (CMP) profile at the center of the tank followed by two constant offset profiles (COP) in the x and y direction. Each collection was completed in 30 s and repeated 50 times during a 28 min experiment. Two minutes after the start of measurements, the surface of the sand was irrigated at a constant flux rate of 0.006 cm/sec for 23 minutes. Time-lapse COPs show increases in traveltime to reflectors in the tank associated with increasing water content, as well as the development of a wetting front reflection. From 4-10 min, the CMPs show a distinct shingling characteristic that is indicative of waveguide dispersion. Forward models where the waveguide is conceptualized as discrete layers and a piece-wise linear function were used to invert picked dispersion curves for waveguide properties. We show the results from both inversion approaches for multiple dispersive CMPs and show how the single layer model fails to represent the gradational nature of the wetting front.

Thermal imaging for cold air flow visualisation and analysis

NASA Astrophysics Data System (ADS)

Grudzielanek, M.; Pflitsch, A.; Cermak, J.

2012-04-01

In this work we present first applications of a thermal imaging system for animated visualization and analysis of cold air flow in field studies. The development of mobile thermal imaging systems advanced very fast in the last decades. The surface temperature of objects, which is detected with long-wave infrared radiation, affords conclusions in different problems of research. Modern thermal imaging systems allow infrared picture-sequences and a following data analysis; the systems are not exclusive imaging methods like in the past. Thus, the monitoring and analysing of dynamic processes became possible. We measured the cold air flow on a sloping grassland area with standard methods (sonic anemometers and temperature loggers) plus a thermal imaging system measuring in the range from 7.5 to 14µm. To analyse the cold air with the thermal measurements, we collected the surface infrared temperatures at a projection screen, which was located in cold air flow direction, opposite the infrared (IR) camera. The intention of using a thermal imaging system for our work was: 1. to get a general idea of practicability in our problem, 2. to assess the value of the extensive and more detailed data sets and 3. to optimise visualisation. The results were very promising. Through the possibility of generating time-lapse movies of the image sequences in time scaling, processes of cold air flow, like flow waves, turbulence and general flow speed, can be directly identified. Vertical temperature gradients and near-ground inversions can be visualised very well. Time-lapse movies will be presented. The extensive data collection permits a higher spatial resolution of the data than standard methods, so that cold air flow attributes can be explored in much more detail. Time series are extracted from the IR data series, analysed statistically, and compared to data obtained using traditional systems. Finally, we assess the usefulness of the additional measurement of cold air flow with thermal imaging systems.

Monitoring hillslope moisture dynamics with surface ERT for enhancing spatial significance of hydrometric point measurements

NASA Astrophysics Data System (ADS)

Hübner, R.; Heller, K.; Günther, T.; Kleber, A.

2015-01-01

Besides floodplains, hillslopes are basic units that mainly control water movement and flow pathways within catchments of subdued mountain ranges. The structure of their shallow subsurface affects water balance, e.g. infiltration, retention, and runoff. Nevertheless, there is still a gap in the knowledge of the hydrological dynamics on hillslopes, notably due to the lack of generalization and transferability. This study presents a robust multi-method framework of electrical resistivity tomography (ERT) in addition to hydrometric point measurements, transferring hydrometric data into higher spatial scales to obtain additional patterns of distribution and dynamics of soil moisture on a hillslope. A geoelectrical monitoring in a small catchment in the eastern Ore Mountains was carried out at weekly intervals from May to December 2008 to image seasonal moisture dynamics on the hillslope scale. To link water content and electrical resistivity, the parameters of Archie's law were determined using different core samples. To optimize inversion parameters and methods, the derived spatial and temporal water content distribution was compared to tensiometer data. The results from ERT measurements show a strong correlation with the hydrometric data. The response is congruent to the soil tension data. Water content calculated from the ERT profile shows similar variations as that of water content from soil moisture sensors. Consequently, soil moisture dynamics on the hillslope scale may be determined not only by expensive invasive punctual hydrometric measurements, but also by minimally invasive time-lapse ERT, provided that pedo-/petrophysical relationships are known. Since ERT integrates larger spatial scales, a combination with hydrometric point measurements improves the understanding of the ongoing hydrological processes and better suits identification of heterogeneities.

Improved characterisation of measurement errors in electrical resistivity tomography (ERT) surveys

NASA Astrophysics Data System (ADS)

Tso, C. H. M.; Binley, A. M.; Kuras, O.; Graham, J.

2016-12-01

Measurement errors can play a pivotal role in geophysical inversion. Most inverse models require users to prescribe a statistical model of data errors before inversion. Wrongly prescribed error levels can lead to over- or under-fitting of data, yet commonly used models of measurement error are relatively simplistic. With the heightening interests in uncertainty estimation across hydrogeophysics, better characterisation and treatment of measurement errors is needed to provide more reliable estimates of uncertainty. We have analysed two time-lapse electrical resistivity tomography (ERT) datasets; one contains 96 sets of direct and reciprocal data collected from a surface ERT line within a 24h timeframe, while the other is a year-long cross-borehole survey at a UK nuclear site with over 50,000 daily measurements. Our study included the characterisation of the spatial and temporal behaviour of measurement errors using autocorrelation and covariance analysis. We find that, in addition to well-known proportionality effects, ERT measurements can also be sensitive to the combination of electrodes used. This agrees with reported speculation in previous literature that ERT errors could be somewhat correlated. Based on these findings, we develop a new error model that allows grouping based on electrode number in additional to fitting a linear model to transfer resistance. The new model fits the observed measurement errors better and shows superior inversion and uncertainty estimates in synthetic examples. It is robust, because it groups errors together based on the number of the four electrodes used to make each measurement. The new model can be readily applied to the diagonal data weighting matrix commonly used in classical inversion methods, as well as to the data covariance matrix in the Bayesian inversion framework. We demonstrate its application using extensive ERT monitoring datasets from the two aforementioned sites.

Label-free imaging to study phenotypic behavioural traits of cells in complex co-cultures

NASA Astrophysics Data System (ADS)

Suman, Rakesh; Smith, Gabrielle; Hazel, Kathryn E. A.; Kasprowicz, Richard; Coles, Mark; O'Toole, Peter; Chawla, Sangeeta

2016-02-01

Time-lapse imaging is a fundamental tool for studying cellular behaviours, however studies of primary cells in complex co-culture environments often requires fluorescent labelling and significant light exposure that can perturb their natural function over time. Here, we describe ptychographic phase imaging that permits prolonged label-free time-lapse imaging of microglia in the presence of neurons and astrocytes, which better resembles in vivo microenvironments. We demonstrate the use of ptychography as an assay to study the phenotypic behaviour of microglial cells in primary neuronal co-cultures through the addition of cyclosporine A, a potent immune-modulator.

3D time-lapse analysis of Rab11/FIP5 complex: spatiotemporal dynamics during apical lumen formation.

PubMed

Mangan, Anthony; Prekeris, Rytis

2015-01-01

Fluorescent imaging of fixed cells grown in two-dimensional (2D) cultures is one of the most widely used techniques for observing protein localization and distribution within cells. Although this technique can also be applied to polarized epithelial cells that form three-dimensional (3D) cysts when grown in a Matrigel matrix suspension, there are still significant limitations in imaging cells fixed at a particular point in time. Here, we describe the use of 3D time-lapse imaging of live cells to observe the dynamics of apical membrane initiation site (AMIS) formation and lumen expansion in polarized epithelial cells.

Reconstructed imaging of acoustic cloak using time-lapse reversal method

NASA Astrophysics Data System (ADS)

Zhou, Chen; Cheng, Ying; Xu, Jian-yi; Li, Bo; Liu, Xiao-jun

2014-08-01

We proposed and investigated a solution to the inverse acoustic cloak problem, an anti-stealth technology to make cloaks visible, using the time-lapse reversal (TLR) method. The TLR method reconstructs the image of an unknown acoustic cloak by utilizing scattered acoustic waves. Compared to previous anti-stealth methods, the TLR method can determine not only the existence of a cloak but also its exact geometric information like definite shape, size, and position. Here, we present the process for TLR reconstruction based on time reversal invariance. This technology may have potential applications in detecting various types of cloaks with different geometric parameters.

Imaging the developing heart: synchronized time-lapse microscopy during developmental changes

NASA Astrophysics Data System (ADS)

Nelson, Carl J.; Buckley, Charlotte; Mullins, John J.; Denvir, Martin A.; Taylor, Jonathan

2018-02-01

How do you use imaging to analyse the development of the heart, which not only changes shape but also undergoes constant, high-speed, quasi-periodic changes? We have integrated ideas from prospective and retrospective optical gating to capture long-term, phase-locked developmental time-lapse videos. In this paper we demonstrate the success of this approach over a key developmental time period: heart looping, where large changes in heart shape prevent previous prospective gating approaches from capturing phase- locked videos. We use the comparison with other approaches to in vivo heart imaging to highlight the importance of collecting the most appropriate data for the biological question.

Understanding Patterns of Social Support and Their Relationship to an ART Adherence Intervention Among Adults in Rural Southwestern Uganda.

PubMed

Atukunda, Esther C; Musiimenta, Angella; Musinguzi, Nicholas; Wyatt, Monique A; Ashaba, Justus; Ware, Norma C; Haberer, Jessica E

2017-02-01

SMS is a widely used technology globally and may also improve ART adherence, yet SMS notifications to social supporters following real-time detection of missed doses showed no clear benefit in a recent pilot trial. We examine the demographic and social-cultural dynamics that may explain this finding. In the trial, 63 HIV-positive individuals initiating ART received a real-time adherence monitor and were randomized to two types of SMS reminder interventions versus a control (no SMS). SMS notifications were also sent to 45 patient-identified social supporters for sustained adherence lapses. Like participants, social supporters were interviewed at enrollment, following their matched participant's adherence lapse and at exit. Social supporters with regular income (RR = 0.27, P = 0.001) were significantly associated with fewer adherence lapses. Instrumental support was associated with fewer adherence lapses only among social supporters who were food secure (RR = 0.58, P = 0.003). Qualitative interview data revealed diverse and complex economic and relationship dynamics, affecting social support. Resource availability in emotionally positive relationships seemingly facilitated helpful support, while limited resources prevented active provision of support for many. Effective social support appeared subject to social supporters' food security, economic stability and a well-functioning social network dependent on trust and supportive disclosure.

Electrokinetically driven microfluidic mixing with patchwise surface heterogeneity and AC applied electric field

NASA Astrophysics Data System (ADS)

Luo, Win-Jet; Yue, Cheng-Feng

2004-12-01

This paper investigates two-dimensional, time-dependent electroosmotic flows driven by an AC electric field via patchwise surface heterogeneities distributed along the microchannel walls. The time-dependent flow fields through the microchannel are simulated for various patchwise heterogeneous surface patterns using the backwards-Euler time stepping numerical method. Different heterogeneous surface patterns are found to create significantly different electrokinetic transport phenomena. It is shown that the presence of oppositely charged surface heterogeneities on the microchannel walls results in the formation of localized flow circulations within the bulk flow. These circulation regions grow and decay periodically in accordance with the applied periodic AC electric field intensity. The circulations provide an effective means of enhancing species mixing in the microchannel. A suitable design of the patchwise heterogeneous surface pattern permits the mixing channel length and the retention time required to attain a homogeneous solution to be reduced significantly.

Time-lapse camera studies of sea-disposed chemical munitions in Hawaii

NASA Astrophysics Data System (ADS)

Edwards, Margo H.; Fornari, Daniel J.; Rognstad, Mark R.; Kelley, Christopher D.; Mah, Christopher L.; Davis, Logan K.; Flores, Kyle R. M.; Main, Erin L.; Bruso, Natalie L.

2016-06-01

The interactions between fauna and sea-disposed munitions provide important evidence regarding whether munitions constituents affect the health of the ocean environment and its inhabitants. To date few studies of these interactions have been conducted at deep-water disposal sites; typically observations of fauna in the vicinity of sea-disposed munitions are limited to the few minutes or hours required to collect physical samples at a specific location. During the 2012 Hawaii Undersea Military Munitions Assessment (HUMMA) field program we deployed two deep-sea time-lapse camera systems with the objectives of cataloging the diversity of fauna visiting sea-disposed chemical munitions and observing faunal behavior and physiology. Over the 1- and 3-day deployments we recorded 28 different species of fishes, crustaceans, mollusks, cnidarians, and echinoderms at the two sites. Both cameras captured the previously undocumented behavior of brisingid sea stars repositioning themselves along chemical munitions casings. Despite the fact that brisingid sea stars are able to move, for the duration of both time-lapse experiments they remained on chemical munitions casings. We interpret this result to indicate that the advantages of residing on a hard substrate slightly elevated above the seafloor outweigh the effects of chemical munitions constituents for brisingid sea stars. One type of physiological anomaly observed on several arms of the brisingid sea stars at the time-lapse sites led to the collection and examination of six specimens. As reported by Mah (2015. Deep Sea Res. II, 2015, XX-XX), these physiological features are the result of parasitic crustaceans and are not caused by chemical munitions constituents.

Grade and looseness of the inner cell mass may lead to the development of monochorionic diamniotic twins.

PubMed

Otsuki, Junko; Iwasaki, Toshiroh; Katada, Yuya; Sato, Haruka; Furuhashi, Kohyu; Tsuji, Yuta; Matsumoto, Yukiko; Shiotani, Masahide

2016-09-01

To examine the relationship between the inner cell mass (ICM) grade and its morphological configuration on the occurrence of monochorionic diamniotic (M-D) twinning. Retrospective embryo cohort study. Private IVF clinic. Evaluation of frozen-thawed single blastocyst transfers with hormone replacement treatment in 8,435. This cohort included 71 blastocysts and their ICMs observed by time-lapse photography. Any changes in configuration of the ICMs observed by time-lapse photography were analyzed retrospectively. The amount of loosening of blastomeres within the ICM was evaluated by time-lapse observations. The number of cells that were involved in the loosening process was also assessed. Both of these parameters were correlated with the type of monozygotic twinning that eventuated. The M-D twinning incidence resulting from blastocysts with a high grade ICM (grade A) were transferred was 0.38% (3/796), whereas it was significantly higher, 1.38% (34/2,463), when blastocysts with a poorer (B and C) grade ICM were transferred. Among 71 transferred frozen-thawed blastocysts that were studied with time-lapse photography, there were two dichorionic diamniotic and one M-D twins. Careful observations of the embryo that resulted in the one M-D case, revealed that the ICM acquired a looser appearance due to decompaction of at least eight cells. This type of decompaction was not observed in the ICMs of other transferred blastocysts. The occurrence of M-D twinning may be avoided by excluding blastocysts that contain decompacting ICMs. Copyright © 2016 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

An evaluation of inexpensive methods for root image acquisition when using rhizotrons.

PubMed

Mohamed, Awaz; Monnier, Yogan; Mao, Zhun; Lobet, Guillaume; Maeght, Jean-Luc; Ramel, Merlin; Stokes, Alexia

2017-01-01

Belowground processes play an essential role in ecosystem nutrient cycling and the global carbon budget cycle. Quantifying fine root growth is crucial to the understanding of ecosystem structure and function and in predicting how ecosystems respond to climate variability. A better understanding of root system growth is necessary, but choosing the best method of observation is complex, especially in the natural soil environment. Here, we compare five methods of root image acquisition using inexpensive technology that is currently available on the market: flatbed scanner, handheld scanner, manual tracing, a smartphone application scanner and a time-lapse camera. Using the five methods, root elongation rate (RER) was measured for three months, on roots of hybrid walnut ( Juglans nigra  ×  Juglans regia L.) in rhizotrons installed in agroforests. When all methods were compared together, there were no significant differences in relative cumulative root length. However, the time-lapse camera and the manual tracing method significantly overestimated the relative mean diameter of roots compared to the three scanning methods. The smartphone scanning application was found to perform best overall when considering image quality and ease of use in the field. The automatic time-lapse camera was useful for measuring RER over several months without any human intervention. Our results show that inexpensive scanning and automated methods provide correct measurements of root elongation and length (but not diameter when using the time-lapse camera). These methods are capable of detecting fine roots to a diameter of 0.1 mm and can therefore be selected by the user depending on the data required.

Adult subependymal neural precursors, but not differentiated cells, undergo rapid cathodal migration in the presence of direct current electric fields.

PubMed

Babona-Pilipos, Robart; Droujinine, Ilia A; Popovic, Milos R; Morshead, Cindi M

2011-01-01

The existence of neural stem and progenitor cells (together termed neural precursor cells) in the adult mammalian brain has sparked great interest in utilizing these cells for regenerative medicine strategies. Endogenous neural precursors within the adult forebrain subependyma can be activated following injury, resulting in their proliferation and migration toward lesion sites where they differentiate into neural cells. The administration of growth factors and immunomodulatory agents following injury augments this activation and has been shown to result in behavioural functional recovery following stroke. With the goal of enhancing neural precursor migration to facilitate the repair process we report that externally applied direct current electric fields induce rapid and directed cathodal migration of pure populations of undifferentiated adult subependyma-derived neural precursors. Using time-lapse imaging microscopy in vitro we performed an extensive single-cell kinematic analysis demonstrating that this galvanotactic phenomenon is a feature of undifferentiated precursors, and not differentiated phenotypes. Moreover, we have shown that the migratory response of the neural precursors is a direct effect of the electric field and not due to chemotactic gradients. We also identified that epidermal growth factor receptor (EGFR) signaling plays a role in the galvanotactic response as blocking EGFR significantly attenuates the migratory behaviour. These findings suggest direct current electric fields may be implemented in endogenous repair paradigms to promote migration and tissue repair following neurotrauma.

The Fate of Nascent APP in Hippocampal Neurons: A Live Cell Imaging Study.

PubMed

DelBove, Claire E; Deng, Xian-Zhen; Zhang, Qi

2018-06-21

Amyloid precursor protein (APP) is closely associated with Alzheimer's disease (AD) because its proteolytic products form amyloid plaques and its mutations are linked to familial AD patients. As a membrane protein, APP is involved in neuronal development and plasticity. However, it remains unclear how nascent APP is distributed and transported to designated membrane compartments to execute its diverse functions. Here, we employed a dual-tagged APP fusion protein in combination with a synaptic vesicle marker to study the surface trafficking and cleavage of APP in hippocampal neurons immediately after its synthesis. Using long-term time-lapse imaging, we found that a considerable amount of nascent APP was directly transported to the somatodendritic surface, from which it propagates to distal neurites. Some APP in the plasma membrane was endocytosed and some was cleaved by α-secretase. Hence, we conclude that surface transportation of APP is a major step preceding its proteolytic processing and neuritic distribution.

In-situ, time-lapse study of extracellular polymeric substance discharge in Streptococcus mutans biofilm.

PubMed

Liu, Bernard Haochih; Yu, Li-Chieh

2017-02-01

Streptococcus mutans is one of the main pathogens that cause tooth decay. By metabolizing carbohydrates, S. mutans emits extracellular polymeric substance (EPS) that adheres to the tooth surface and forms layers of biofilm. Periodontal disease occurs due to the low pH environment created by S. mutans biofilm, and such an acidic environment gradually erodes tooth enamel. Since the existence of EPS is essential in the formation of biofilm, the in-situ investigation of its generation and distribution in real time is the key to the control and suppression of S. mutans biofilm. Prior studies of the biofilm formation process by fluorescence microscope, scanning electron microscope, or spectroscope have roughly divided the mechanism into three stages: (1) initial attachment; (2) microcolonies; and (3) maturation. However, these analytical methods are incapable to observe real-time changes in different locations of the extracellular matrix, and to analyze mechanical properties for single bacteria in micro and nanoscale. Since atomic force microscopy (AFM) operates by precise control of tip-sample interaction forces in liquid and in air, living microorganisms can be analyzed under near-physiological conditions. Thus, analytical techniques based on AFM constitute powerful tools for the study of biological samples, both qualitatively and quantitatively. In this study, we used AFM to quantitatively track the changes of multiple nanomechanical properties of S. mutans, including dissipation energy, adhesion force, deformation, and elastic modulus at different metabolic stages. The data revealed that the bacterial extracellular matrix has a gradient distribution in stickiness, in which different stickiness indicates the variation of EPS compositions, freshness, and metabolic stages. In-situ, time-lapse AFM images showed the local generation and distribution of EPS at different times, in which the highest adhesion distributed along sides of the S. mutans cells. Through time-lapse analysis, we concluded that each contour layer is associated with a dynamic process of cell growth and nutrient consumption, and S. mutans is capable of controlling the priority of EPS secretion at specific locations. The live bacteria exhibited cyclic metabolic activities in the period of 23-34min at the maturation stage of biofilm formation. In addition, the discharge of EPS is responsive to the shear stress caused by the topographical change of biofilm to provide stronger mechanical support in the formation of 3D networked biofilm. Copyright © 2016 Elsevier B.V. All rights reserved.

Meteorological and snow distribution data in the Izas Experimental Catchment (Spanish Pyrenees) from 2011 to 2017

NASA Astrophysics Data System (ADS)

Revuelto, Jesús; Azorin-Molina, Cesar; Alonso-González, Esteban; Sanmiguel-Vallelado, Alba; Navarro-Serrano, Francisco; Rico, Ibai; López-Moreno, Juan Ignacio

2017-12-01

This work describes the snow and meteorological data set available for the Izas Experimental Catchment in the Central Spanish Pyrenees, from the 2011 to 2017 snow seasons. The experimental site is located on the southern side of the Pyrenees between 2000 and 2300 m above sea level, covering an area of 55 ha. The site is a good example of a subalpine environment in which the evolution of snow accumulation and melt are of major importance in many mountain processes. The climatic data set consists of (i) continuous meteorological variables acquired from an automatic weather station (AWS), (ii) detailed information on snow depth distribution collected with a terrestrial laser scanner (TLS, lidar technology) for certain dates across the snow season (between three and six TLS surveys per snow season) and (iii) time-lapse images showing the evolution of the snow-covered area (SCA). The meteorological variables acquired at the AWS are precipitation, air temperature, incoming and reflected solar radiation, infrared surface temperature, relative humidity, wind speed and direction, atmospheric air pressure, surface temperature (snow or soil surface), and soil temperature; all were taken at 10 min intervals. Snow depth distribution was measured during 23 field campaigns using a TLS, and daily information on the SCA was also retrieved from time-lapse photography. The data set (https://doi.org/10.5281/zenodo.848277) is valuable since it provides high-spatial-resolution information on the snow depth and snow cover, which is particularly useful when combined with meteorological variables to simulate snow energy and mass balance. This information has already been analyzed in various scientific studies on snow pack dynamics and its interaction with the local climatology or topographical characteristics. However, the database generated has great potential for understanding other environmental processes from a hydrometeorological or ecological perspective in which snow dynamics play a determinant role.

The turbulent life of juvenile icebergs: Observations from an array of high-rate time-lapse cameras in LeConte Bay, Alaska

NASA Astrophysics Data System (ADS)

Kienholz, C.; Amundson, J. M.; Jackson, R. H.; Motyka, R. J.; Nash, J. D.; Sutherland, D.

2017-12-01

Tidewater glacier behavior is driven by poorly understood processes occurring at the ice-ocean interface, including sedimentation and erosion, iceberg calving, and submarine melting. These processes are inherently difficult to observe, calling for innovative field techniques and numerical models. As part of a multi-year field effort to constrain ocean-glacier heat and mass exchange, we deployed an array of high-rate time-lapse cameras (sampling intervals between 15 seconds and 2 minutes) to monitor the terminus of LeConte Glacier and its proglacial fjord. The camera array has operated continuously for more than a year. Our high sampling rates enable tracking of iceberg motion with optical flow algorithms, which have been used widely in computer vision but less so in glaciology and oceanography. Such algorithms track individual features (e.g., corners of icebergs), which is ideal for iceberg-rich fjords, where motion can vary substantially over short temporal and spatial scales (e.g., due to complex surface currents or different iceberg sizes). We process our data to quantify subdaily to seasonal patterns in surface currents and relate them to forcing from tides, wind, and glacier runoff. Flow is most variable close to the glacier terminus due to frequent calving events and turbulent plume dynamics. Farther down fjord, more consistent patterns emerge, driven by tides, wind, and runoff and altered by fjord geometry. Our tracking results compare favorably to and complement our Acoustic Doppler Current Profiler measurements from boats and moorings. Given their high spatial and temporal resolution, our observations will place important surface constraints on forthcoming hydrodynamic modeling efforts. The deployment of the cameras in a harsh environment and the corresponding image processing provided an opportunity to test hardware and software thoroughly, which will prove useful for similar systems at other glaciers.

A laboratory validation study of the time-lapse oscillatory pumping test concept for leakage detection in geological repositories

NASA Astrophysics Data System (ADS)

Sun, A. Y.; Islam, A.; Lu, J.

2017-12-01

Time-lapse oscillatory pumping test (OPT) has been introduced recently as a pressure-based monitoring technique for detecting potential leakage in geologic repositories. By routinely conducting OPT at a number of pulsing frequencies, a site operator may identify the potential anomalies in the frequency domain, alleviating the ambiguity caused by reservoir noise and improving the signal-to-noise ratio. Building on previous theoretical and field studies, this work performed a series of laboratory experiments to validate the concept of time-lapse OPT using a custom made, stainless steel tank under relatively high pressures ( 120psi). The experimental configuration simulates a miniature geologic storage repository consisting of three layers (i.e., injection zone, caprock, and above-zone aquifer). Results show that leakage in the injection zone led to deviations in the power spectrum of observed pressure data, and the amplitude of which also increases with decreasing pulsing frequencies. The experimental results were further analyzed by developing a 3D flow model, using which the model parameters were estimated through frequency domain inversion.

Using a time lapse microgravity model for mapping seawater intrusion around Semarang

DOE Office of Scientific and Technical Information (OSTI.GOV)

Supriyadi,, E-mail: supriyadi@mail.unnes.ac.id; Khumaedi; Yusuf, M.

A modeling of time-lapse microgravity anomaly due to sea water intrusion has been conducted. It used field data of aquifer cross section, aquifer thickness and lithology of research area. Those data were then processed using Grav3D and Surfer. Modeling results indicated that the intrusion of sea water resulting in a time-lapse microgravity anomalies of 0.12 to 0.18 mGal, at soil layer density of 0.15 g/cm{sup 3} to 0.3 g/cm{sup 3} and at depth of 30 to 100 m. These imply that the areas experiencing seawater intrusion were Tanjung Mas, SPBE Bandarharjo, Brass, Old Market Boom and Johar as the microgravity measured there weremore » in the range of 0.12 to 0.18 mGal and the density contrast were at 0.15 g/cm{sup 3} to 0.28 g/cm{sup 3}. Areas that experienced fluid reduction were Puri Anjasmoro, Kenconowungu and Puspowarno with microgravity changes from -0.06 mGal to -0.18 mGal.« less

Intelligent data analysis to model and understand live cell time-lapse sequences.

PubMed

Paterson, Allan; Ashtari, M; Ribé, D; Stenbeck, G; Tucker, A

2012-01-01

One important aspect of cellular function, which is at the basis of tissue homeostasis, is the delivery of proteins to their correct destinations. Significant advances in live cell microscopy have allowed tracking of these pathways by following the dynamics of fluorescently labelled proteins in living cells. This paper explores intelligent data analysis techniques to model the dynamic behavior of proteins in living cells as well as to classify different experimental conditions. We use a combination of decision tree classification and hidden Markov models. In particular, we introduce a novel approach to "align" hidden Markov models so that hidden states from different models can be cross-compared. Our models capture the dynamics of two experimental conditions accurately with a stable hidden state for control data and multiple (less stable) states for the experimental data recapitulating the behaviour of particle trajectories within live cell time-lapse data. In addition to having successfully developed an automated framework for the classification of protein transport dynamics from live cell time-lapse data our model allows us to understand the dynamics of a complex trafficking pathway in living cells in culture.

Simultaneous Gram and viability staining on activated sludge exposed to erythromycin: 3D CLSM time-lapse imaging of bacterial disintegration.

PubMed

Louvet, Jean-Noël; Attik, Ghania; Dumas, Dominique; Potier, Olivier; Pons, Marie-Noëlle

2011-11-01

The effect of erythromycin on activated sludge bacteria according to their Gram type was investigated with 3-dimensional Confocal Laser Scanning Microscopy (CLSM) time-lapse imaging. The fluorescent stains SYTOX Green and Texas Red-X conjugate of wheat germ agglutinin stained dying bacteria and Gram(+) bacteria respectively. Time-lapse imaging allowed an understanding of the staining mechanism and the measurement of the death rate. In presence of erythromycin (10mg/L), Gram(+) bacteria had a higher mortality rate than the Gram(-) bacteria. This result suggests that antibiotic in wastewater could change the activated sludge bacteria composition, according to their Gram type by selecting the bacteria which are the least sensitive to the antibiotics. However bacterial death was followed by bacterial disintegration leading to a decrease in the fluorescence. Results suggested that the viability indicators based on membrane integrity should be used with a correct sampling method, which can give the initial quantity of living bacteria. Copyright © 2011 Elsevier GmbH. All rights reserved.

The Extreme Ice Survey: Capturing and Conveying Glacial Processes Through Time-Lapse Imagery and Narration

NASA Astrophysics Data System (ADS)

Balog, J. D.; Box, J. E.; Pfeffer, W. T.; Hood, E. W.; Fagre, D. B.; Anker, C.; O'Neel, S.

2010-12-01

The Extreme Ice Survey (EIS) uses time-lapse photography, conventional photography, and video to document rapid change in the Earth's glacial ice. The EIS team currently has 38 time-lapse cameras at sites in Greenland, Iceland, Alaska, the Rocky Mountains and Nepal. EIS supplements this ongoing record with annual repeat photography in British Columbia, Iceland, the Alps, and Bolivia. EIS imagery supplies basic knowledge in glacier dynamics to the science community, as well as compelling, engaging narratives to the general public about the immediacy of the Anthropocene and climate change. Visual materials from EIS have impacted more than 150 million people, ranging from White House staff, the U. S. Congress and government agency officials to globally influential corporate officers and all age strata of the general public. Media products include a National Geographic/NOVA special, two National Geographic magazine articles, a feature in Parade magazine (circulation 71 million), and numerous presentations on CNN, NBC, BBC and National Public Radio. Columbia Glacier, Alaska, June 2006, May 2007, June 2008 terminus indicated.

Time-lapse filming of newborn infants. A new technique in monitoring of behavioral states.

PubMed

Wallin, A

1984-05-01

Knowledge of the newborn infant's behavior is of great importance for an understanding of postnatal adaptation and the influence of exogenous stimuli, such as drugs. To date, however, the methods used have been to sophisticated and complex for use on a busy ward. Moreover, procedures for monitoring physiological parameters in this age group should be non-invasive and gentle for the infant, and acceptable to parents and personnel. In this paper, a simplified technique is presented where observation of the infant can be registered with an ordinary super-8 movie camera adapted to time-lapse. Heart rate, EMG and vocalization are recorded simultaneously. The time-lapse filming technique is relatively easy to learn, it is simple and economic and can be used even during routine clinical care. Assessments were made from the films only, from the recordings only and from a combination of films and recordings. All these modes of assessment were found to be satisfactorily reproducible. Filming combined with respiratory recording gives sufficient information to classify neonatal infant behavior.

Scattered surface wave energy in the seismic coda

USGS Publications Warehouse

Zeng, Y.

2006-01-01

One of the many important contributions that Aki has made to seismology pertains to the origin of coda waves (Aki, 1969; Aki and Chouet, 1975). In this paper, I revisit Aki's original idea of the role of scattered surface waves in the seismic coda. Based on the radiative transfer theory, I developed a new set of scattered wave energy equations by including scattered surface waves and body wave to surface wave scattering conversions. The work is an extended study of Zeng et al. (1991), Zeng (1993) and Sato (1994a) on multiple isotropic-scattering, and may shed new insight into the seismic coda wave interpretation. The scattering equations are solved numerically by first discretizing the model at regular grids and then solving the linear integral equations iteratively. The results show that scattered wave energy can be well approximated by body-wave to body wave scattering at earlier arrival times and short distances. At long distances from the source, scattered surface waves dominate scattered body waves at surface stations. Since surface waves are 2-D propagating waves, their scattered energies should in theory follow a common decay curve. The observed common decay trends on seismic coda of local earthquake recordings particular at long lapse times suggest that perhaps later seismic codas are dominated by scattered surface waves. When efficient body wave to surface wave conversion mechanisms are present in the shallow crustal layers, such as soft sediment layers, the scattered surface waves dominate the seismic coda at even early arrival times for shallow sources and at later arrival times for deeper events.

Estimating adolescent sleep need using dose-response modeling.

PubMed

Short, Michelle A; Weber, Nathan; Reynolds, Chelsea; Coussens, Scott; Carskadon, Mary A

2018-04-01

This study will (1) estimate the nightly sleep need of human adolescents, (2) determine the time course and severity of sleep-related deficits when sleep is reduced below this optimal quantity, and (3) determine whether sleep restriction perturbs the circadian system as well as the sleep homeostat. Thirty-four adolescents aged 15 to 17 years spent 10 days and nine nights in the sleep laboratory. Between two baseline nights and two recovery nights with 10 hours' time in bed (TIB) per night, participants experienced either severe sleep restriction (5-hour TIB), moderate sleep restriction (7.5-hour TIB), or no sleep restriction (10-hour TIB) for five nights. A 10-minute psychomotor vigilance task (PVT; lapse = response after 500 ms) and the Karolinska Sleepiness Scale were administered every 3 hours during wake. Salivary dim-light melatonin onset was calculated at baseline and after four nights of each sleep dose to estimate circadian phase. Dose-dependent deficits to sleep duration, circadian phase timing, lapses of attention, and subjective sleepiness occurred. Less TIB resulted in less sleep, more lapses of attention, greater subjective sleepiness, and larger circadian phase delays. Sleep need estimated from 10-hour TIB sleep opportunities was approximately 9 hours, while modeling PVT lapse data suggested that 9.35 hours of sleep is needed to maintain optimal sustained attention performance. Sleep restriction perturbs homeostatic and circadian systems, leading to dose-dependent deficits to sustained attention and sleepiness. Adolescents require more sleep for optimal functioning than typically obtained.

Respiratory problems and anxiety sensitivity in smoking lapse among treatment seeking smokers.

PubMed

Zvolensky, Michael J; Rodríguez-Cano, Rubén; Paulus, Daniel J; Kotov, Roman; Bromet, Evelyn; Gonzalez, Adam; Manning, Kara; Luft, Benjamin J

2017-12-01

The current study examined whether the interaction of lower respiratory symptoms and anxiety sensitivity is related to smoking lapse in the context of smoking cessation. Participants were adult daily smokers (N=60) exposed to the World Trade Center (WTC) disaster who were in a smoking cessation treatment program (75.0% male, 50.6years old [SD=9.2], and current smoking rate was 17.6 cigarettes per day (SD=10.6). Results indicated that the interaction between lower respiratory symptoms and anxiety sensitivity was a significant predictor of greater risk for lapse (i.e., lower survival time; B=0.005, OR=1.01, p=0.039). Follow-up analysis showed that greater respiratory symptoms were a significant predictor of lapse risk among those with high (B=0.116, OR=1.12, p=0.025), but not those with low (B=-0.048, OR=0.95, p=0.322), levels of anxiety sensitivity. The findings from the current study suggest that smokers with greater respiratory symptoms and higher levels of anxiety sensitivity may be associated with early lapse to smoking following smoking cessation treatment. Future work has the potential to inform the development of tailored cessation interventions for smokers who experience varying levels of lower respiratory symptoms and anxiety sensitivity. Copyright © 2017 Elsevier Ltd. All rights reserved.

Motion of particles adhering to the leading lamella of crawling cells

PubMed Central

1981-01-01

Time-lapsed films of particle motion on the leading lamella of chick heart fibroblasts and mouse peritoneal macrophages were analyzed. The particles were composed of powdered glass or powdered aminated polystyrene and were 0.5-1.0 micrometer in radius. Particle motions were described by steps in position from one frame to the time-lapse movies to the next. The statistics of the step-size distribution of the particles were consistent with a particle in Brownian motion subject to a constant force. From the Brownian movement, we have calculated the two-dimensional diffusion coefficient of different particles. These vary by more than an order of magnitude (10(-11)-10(-10) cm2/s) even for particles composed of the same material and located very close to each other on the surface of the cell. This variation was not correlated with particle size but is interpretable as a result of different numbers of adhesive bonds holding the particles to the cells. The constant component of particle movement can be interpreted as a result of a constant force acting on each particle (0.1-1.0 x 10(-8) dyn). Variations in the fractional coefficient for particles close to each other on the cell surface do not yield corresponding differences in velocity, suggesting that the frictional coefficient and the driving force vary together. This is consistent with the hypothesis that the particles are carried by flow of the membrane as a whole or by flow of some submembrane material. The utility of our methods for monitoring cell motile behavior in biologically interesting situations, such as a chemotactic gradient, is discussed. PMID:7309794

Downhole monitoring of biogenic gas production at the Maguelone shallow injection experimental site (Languedoc coastline, France).

NASA Astrophysics Data System (ADS)

Abdelghafour, H.; Brondolo, F.; Denchik, N.; Pezard, P. A.

2014-12-01

The controllability of CO2 geological storage can ensure the integrity of storage operations, requiring a precise monitoring of reservoir fluids and properties during injection and over time. In this context, deep saline aquifers offer a large capacity of storing CO2, but the accessibility to long term behavior studies remains limited until now. The Maguelone shallow experimental site located near Montpellier (Languedoc, France) provides such an opportunity for the understanding and accuracy of hydrogeophysical monitoring methods. The geology, petrophysic and hydrology of this site have been studied in details in previous studies, revealing the presence of a thin saline aquifer at 13-16 m depth surrounded by clay-rich materials. The site as a whole provides a natural laboratory to study CO2 injection at field scale, shallow depth, hence reasonable costs. The monitoring setup is composed of a series of hydrogeophysical and geochemical methods offering measurements of fluid pore pressure, electrical resistivity, acoustic velocities as well as pH and fluid properties and chemistry. To assess the response of the reservoir during CO2 injection, all measurements need to be compared to a representative baseline. Long after a series of gas injection experiments at Maguelone, fluctuations overtime of reservoir fluids and properties (such as pore fluid pH) were discovered at steady state, demonstrating the natural variability of the site in terms of biogenic gas (H2S, CH4, CO2) production and transfer. For this, a new resistivity baseline had to be constructed for all observatories. From this, the downhole gas saturation was determined versus depth and time from time-lapse resistivity logs analysed on the basis of other logs and laboratory measurements. The Waxman and Smits model (1968) for electrical properties of sand-clay formations was modified to estimate the gas saturation in 4D, to account for surface conductivity and pore connectivity. High frequency logging and monitoring of electrical properties both, with several measurements per hour and a dm-scale resolution, provide and insight into subsurface dynamics in terms of gas flow and storage, with biogenic gas saturations ranging from 0.1 to 5.0 %. This natural contribution has to be taken into account for upcoming experiments.

Characterising the hydrothermal circulation patterns beneath thermal springs in the limestones of the Carboniferous Dublin Basin, Ireland: a geophysical and geochemical approach.

NASA Astrophysics Data System (ADS)

Blake, Sarah; Henry, Tiernan; Muller, Mark R.; Jones, Alan G.; Moore, John Paul; Murray, John; Campanyà, Joan; Vozár, Jan; Walsh, John; Rath, Volker

2016-04-01

A hydrogeological conceptual model of the sources, circulation pathways and temporal variations of two low-enthalpy thermal springs is derived from a multi-disciplinary approach. The springs are situated in the Carboniferous limestones of the Dublin Basin, in east-central Ireland. Kilbrook spring (Co. Kildare) has the highest recorded temperatures for any thermal spring in Ireland (maximum of 25.0 °C), and St. Gorman's Well (Co. Meath) has a complex and variable temperature profile (maximum of 21.8 °C). These temperatures are elevated with respect to average Irish groundwater temperatures (9.5 - 10.5 °C), and represent a geothermal energy potential, which is currently under evaluation. A multi-disciplinary investigation based upon audio-magnetotelluric (AMT) surveys, time-lapse temperature and chemistry measurements, and hydrochemical analysis, has been undertaken with the aims of investigating the provenance of the thermal groundwater and characterising the geological structures facilitating groundwater circulation in the bedrock. The hydrochemical analysis indicates that the thermal waters flow within the limestones of the Dublin Basin, and there is evidence that Kilbrook spring receives a contribution from deep-basinal fluids. The time-lapse temperature, electrical conductivity and water level records for St. Gorman's Well indicate a strongly non-linear response to recharge inputs to the system, suggestive of fluid flow in karst conduits. The 3-D electrical resistivity models of the subsurface revealed two types of geological structure beneath the springs; (1) Carboniferous normal faults, and (2) Cenozoic strike-slip faults. These structures are dissolutionally enhanced, particularly where they intersect. The karstification of these structures, which extend to depths of at least 500 m, has provided conduits that facilitate the operation of a relatively deep hydrothermal circulation pattern (likely estimated depths between 240 and 1,000 m) within the Dublin Basin. The results of this study support a hypothesis that the thermal maximum and simultaneous increased discharge observed each winter at both springs is the result of rapid infiltration, heating and re-circulation of meteoric waters within a structurally- and recharge-controlled hydrothermal circulation system.

The Estimation of the Water Table and the Specific Yield with time-lapse 2D Electrical Resistivity Imaging in the Minzu Basin of Central Taiwan

NASA Astrophysics Data System (ADS)

Yao, H. J.; Chang, P. Y.

2017-12-01

The Minzu Basin is located at the central part of Taiwan, which is bounded by the Changhua fault in the west and the Chelungpu thrust fault in its east. The Chuoshui river flows through the basin and brings in thick unconsolidated gravel layers deposited over the Pleistocene rocks and gravels. Thus, the area has a great potential for groundwater developments. However, there are not enough observation wells in the study area for a further investigation of groundwater characteristics. Therefore, we tried to use the electrical resistivity imaging(ERI) method for estimating the depth of the groundwater table and the specific yield of the unconfined aquifer in dry and wet seasons. We have deployed 13 survey lines with the Wenner-Schlumberger array in the study area in March and June of 2017. Based on the data from the ERI measurements and the nearby Xinming observation well, we turned the resistivity into the relative saturation with respect to the saturated background based on the Archie's Law. With the depth distribution curve of the relative saturation, we found that the curve exhibits a similar shape to the Soil-Water Characteristic Curve. Hence we attempted to use the Van-Genuchten model for characterizing the depth of the water table. And we also tried to calculated the specific yield by taking the difference between the saturated and residual water contents. According to our preliminary results, we found that the depth of groundwater is ranging from 8-m to 10.7-m and the specific yield is about 0.095 0.146 in March. In addition, the depth of groundwater in June is ranging from about 7.6m to 9.8m and the estimated specific yield is about 0.1 0.157. The average level of groundwater in the wet season of June is raised about 0.6m than that in March. We are now working on collecting more time-lapse data, as well as making the direct comparisons with the data from new observation wells completed recently, in order to verify our estimations from the resistivity surveys.

Multifunctional surface modification of silk fabric via graphene oxide repeatedly coating and chemical reduction method

NASA Astrophysics Data System (ADS)

Cao, Jiliang; Wang, Chaoxia

2017-05-01

Multifunctional silk fabrics with electrical conductive, anti-ultraviolet and water repellent were successfully prepared by surface modification with graphene oxide (GO). The yellow-brown GO deposited on the surface of silk fabric was converted into graphitic black reduced graphene (RGO) by sodium hydrosulfite. The surface properties of silk fabrics were changed by repeatedly RGO coating process, which have been proved by SEM and XPS. The SEM results showed that the RGO sheets were successive form a continuously thin film on the surface of silk fabrics, and the deposition of GO or RGO also can be proved by XPS. The electrical conductivity was tested by electrical surface resistance value of the silk fabric, the surface resistance decreased with increasing of RGO surface modification times, and a low surface resistance value reached to 3.24 KΩ cm-1 after 9 times of modification, indicating the silk obtained excellent conductivity. The UPF value of one time GO modification silk fabric (silk-1RGO) was enhanced significantly to 24.45 in comparison to 10.40 of original silk. The contact angle of RGO coating silk samples was all above of 120°. The durability of RGO coated silk fabrics was tested by laundering. The electrical surface resistance of silk-4RGO (65.74 KΩ cm-1), silk-6RGO (15.54 KΩ cm-1) and silk-8RGO (3.86 KΩ cm-1) fabrics was up to 86.82, 22.30 and 6.57 KΩ cm-1 after 10 times of standard washing, respectively. The UPF value, contact angle and color differences of RGO modified silk fabric slightly changed before and after 10 times of standard washing. Therefore, the washing fastness of electric conduction, anti-ultraviolet and water repellent multifunctional silk fabrics was excellent.

TLM-Quant: an open-source pipeline for visualization and quantification of gene expression heterogeneity in growing microbial cells.

PubMed

Piersma, Sjouke; Denham, Emma L; Drulhe, Samuel; Tonk, Rudi H J; Schwikowski, Benno; van Dijl, Jan Maarten

2013-01-01

Gene expression heterogeneity is a key driver for microbial adaptation to fluctuating environmental conditions, cell differentiation and the evolution of species. This phenomenon has therefore enormous implications, not only for life in general, but also for biotechnological applications where unwanted subpopulations of non-producing cells can emerge in large-scale fermentations. Only time-lapse fluorescence microscopy allows real-time measurements of gene expression heterogeneity. A major limitation in the analysis of time-lapse microscopy data is the lack of fast, cost-effective, open, simple and adaptable protocols. Here we describe TLM-Quant, a semi-automatic pipeline for the analysis of time-lapse fluorescence microscopy data that enables the user to visualize and quantify gene expression heterogeneity. Importantly, our pipeline builds on the open-source packages ImageJ and R. To validate TLM-Quant, we selected three possible scenarios, namely homogeneous expression, highly 'noisy' heterogeneous expression, and bistable heterogeneous expression in the Gram-positive bacterium Bacillus subtilis. This bacterium is both a paradigm for systems-level studies on gene expression and a highly appreciated biotechnological 'cell factory'. We conclude that the temporal resolution of such analyses with TLM-Quant is only limited by the numbers of recorded images.

Time lapse imaging: is it time to incorporate this technology into routine clinical practice?

PubMed

Bhide, Priya; Maheshwari, Abha; Cutting, Rachel; Seenan, Susan; Patel, Anita; Khan, Khalid; Homburg, Roy

2017-06-01

Time-lapse imaging (TLI) systems for embryo incubation, assessment and selection are a novel technology available to in vitro fertilization (IVF) clinics. However, there is uncertainty about their clinical and cost-effectiveness and insufficient good quality evidence to warrant their routine use. Despite this, enthusiastic commercial marketing and slipping clinical equipoise have led to the widespread hasty introduction of this technology into practice, often at a considerable expense to the patient. We have reviewed the published literature and aim to summarize the strengths, weaknesses, opportunities and threats of these systems. These specialized incubators provide undisturbed embryo culture conditions and, by almost continuous monitoring of embryo development, generate morphokinetic parameters to aid embryo selection. They are thus hypothesized to improve outcomes following IVF. Although literature reports improved reproductive outcomes, these outcomes are largely surrogate and there is a paucity of studies reporting live births. The use of time lapse systems may reduce early pregnancy loss, increase elective single embryo transfers and limit multiple pregnancies through better embryo selection. However, the quality of the studies and hence the evidence so far, is low to moderate quality. We recommend further research producing robust high-quality evidence for and against the use of these systems.

Dynamic phase differences based on quantitative phase imaging for the objective evaluation of cell behavior.

PubMed

Krizova, Aneta; Collakova, Jana; Dostal, Zbynek; Kvasnica, Lukas; Uhlirova, Hana; Zikmund, Tomas; Vesely, Pavel; Chmelik, Radim

2015-01-01

Quantitative phase imaging (QPI) brought innovation to noninvasive observation of live cell dynamics seen as cell behavior. Unlike the Zernike phase contrast or differential interference contrast, QPI provides quantitative information about cell dry mass distribution. We used such data for objective evaluation of live cell behavioral dynamics by the advanced method of dynamic phase differences (DPDs). The DPDs method is considered a rational instrument offered by QPI. By subtracting the antecedent from the subsequent image in a time-lapse series, only the changes in mass distribution in the cell are detected. The result is either visualized as a two dimensional color-coded projection of these two states of the cell or as a time dependence of changes quantified in picograms. Then in a series of time-lapse recordings, the chain of cell mass distribution changes that would otherwise escape attention is revealed. Consequently, new salient features of live cell behavior should emerge. Construction of the DPDs method and results exhibiting the approach are presented. Advantage of the DPDs application is demonstrated on cells exposed to an osmotic challenge. For time-lapse acquisition of quantitative phase images, the recently developed coherence-controlled holographic microscope was employed.

Dynamic phase differences based on quantitative phase imaging for the objective evaluation of cell behavior

NASA Astrophysics Data System (ADS)

Krizova, Aneta; Collakova, Jana; Dostal, Zbynek; Kvasnica, Lukas; Uhlirova, Hana; Zikmund, Tomas; Vesely, Pavel; Chmelik, Radim

2015-11-01

Quantitative phase imaging (QPI) brought innovation to noninvasive observation of live cell dynamics seen as cell behavior. Unlike the Zernike phase contrast or differential interference contrast, QPI provides quantitative information about cell dry mass distribution. We used such data for objective evaluation of live cell behavioral dynamics by the advanced method of dynamic phase differences (DPDs). The DPDs method is considered a rational instrument offered by QPI. By subtracting the antecedent from the subsequent image in a time-lapse series, only the changes in mass distribution in the cell are detected. The result is either visualized as a two-dimensional color-coded projection of these two states of the cell or as a time dependence of changes quantified in picograms. Then in a series of time-lapse recordings, the chain of cell mass distribution changes that would otherwise escape attention is revealed. Consequently, new salient features of live cell behavior should emerge. Construction of the DPDs method and results exhibiting the approach are presented. Advantage of the DPDs application is demonstrated on cells exposed to an osmotic challenge. For time-lapse acquisition of quantitative phase images, the recently developed coherence-controlled holographic microscope was employed.

Heart rate measurement based on a time-lapse image.

PubMed

Takano, Chihiro; Ohta, Yuji

2007-10-01

Using a time-lapse image acquired from a CCD camera, we developed a non-contact and non-invasive device, which could measure both the respiratory and pulse rate simultaneously. The time-lapse image of a part of the subject's skin was consecutively captured, and the changes in the average image brightness of the region of interest (ROI) were measured for 30s. The brightness data were processed by a series of operations of interpolation as follows a first-order derivative, a low pass filter of 2 Hz, and a sixth-order auto-regressive (AR) spectral analysis. Fourteen sound and healthy female subjects (22-27 years of age) participated in the experiments. Each subject was told to keep a relaxed seating posture with no physical restriction. At the same time, heart rate was measured by a pulse oximeter and respiratory rate was measured by a thermistor placed at the external naris. Using AR spectral analysis, two clear peaks could be detected at approximately 0.3 and 1.2 Hz. The peaks were thought to correspond to the respiratory rate and the heart rate. Correlation coefficients of 0.90 and 0.93 were obtained for the measurement of heart rate and respiratory rate, respectively.

The second phase of bipolar, nanosecond-range electric pulses determines the electroporation efficiency.

PubMed

Pakhomov, Andrei G; Grigoryev, Sergey; Semenov, Iurii; Casciola, Maura; Jiang, Chunqi; Xiao, Shu

2018-03-29

Bipolar cancellation refers to a phenomenon when applying a second electric pulse reduces ("cancels") cell membrane damage by a preceding electric pulse of the opposite polarity. Bipolar cancellation is a reason why bipolar nanosecond electric pulses (nsEP) cause weaker electroporation than just a single unipolar phase of the same pulse. This study was undertaken to explore the dependence of bipolar cancellation on nsEP parameters, with emphasis on the amplitude ratio of two opposite polarity phases of a bipolar pulse. Individual cells (CHO, U937, or adult mouse ventricular cardiomyocytes (VCM)) were exposed to either uni- or bipolar trapezoidal nsEP, or to nanosecond electric field oscillations (NEFO). The membrane injury was evaluated by time-lapse confocal imaging of the uptake of propidium (Pr) or YO-PRO-1 (YP) dyes and by phosphatidylserine (PS) externalization. Within studied limits, bipolar cancellation showed little or no dependence on the electric field intensity, pulse repetition rate, chosen endpoint, or cell type. However, cancellation could increase for larger pulse numbers and/or for longer pulses. The sole most critical parameter which determines bipolar cancellation was the phase ratio: maximum cancellation was observed with the 2nd phase of about 50% of the first one, whereas a larger 2nd phase could add a damaging effect of its own. "Swapping" the two phases, i.e., delivering the smaller phase before the larger one, reduced or eliminated cancellation. These findings are discussed in the context of hypothetical mechanisms of bipolar cancellation and electroporation by nsEP. Copyright © 2018 Elsevier B.V. All rights reserved.

Arctic sea-ice variations from time-lapse passive microwave imagery

USGS Publications Warehouse

Campbell, W.J.; Ramseier, R.O.; Zwally, H.J.; Gloersen, P.

1980-01-01

This paper presents: (1) a short historical review of the passive microwave research on sea ice which established the observational and theoretical base permitting the interpretation of the first passive microwave images of Earth obtained by the Nimbus-5 ESMR; (2) the construction of a time-lapse motion picture film of a 16-month set of serial ESMR images to aid in the formidable data analysis task; and (3) a few of the most significant findings resulting from an early analysis of these data, using selected ESMR images to illustrate these findings. ?? 1980 D. Reidel Publishing Co.

Are lapsed donors willing to resume blood donation, and what determines their motivation to do so?

PubMed

van Dongen, Anne; Abraham, Charles; Ruiter, Robert A C; Schaalma, Herman P; de Kort, Wim L A M; Dijkstra, J Anneke; Veldhuizen, Ingrid J T

2012-06-01

This study investigated the possibility of rerecruiting lapsed blood donors. Reasons for donation cessation, motivation to restart donation, and modifiable components of donation motivation were examined. We distinguished between lapsed donors who had passively withdrawn by merely not responding to donation invitations and donors who had contacted the blood bank to actively withdraw. A cross-sectional survey was sent to 400 actively lapsed donors and to 400 passively lapsed donors, measuring intention to restart donation and psychological correlates of restart intention. The data were analyzed using multiple regression analyses. The response rate among actively lapsed donors was higher than among passively lapsed donors (37% vs. 25%). Actively lapsed donors typically ceased donating because of physical reactions, while passively lapsed donors quit because of a busy lifestyle. Nonetheless, 51% of actively lapsed responders and 80% of passively lapsed responders were willing to restart donations. Multiple regression analysis showed that, for passively lapsed donors, cognitive attitude was the strongest correlate of intention to donate in the future (β=0.605, p<0.001), with affective attitude (β=0.239, p<0.05) and self-efficacy (β=0.266, p<0.001) explaining useful proportions of the variance as well. For actively lapsed donors, cognitive attitude was also the strongest correlate of intention (β=0.601, p<0.001), with affective attitude (β=0.345, p<0.001) and moral norm (β=-0.118, p<0.05) explaining smaller proportions of the variance. The majority of lapsed donors indicated a moderate to high intention to restart donations. Interventions focusing on boosting cognitive and affective attitudes and self-efficacy could further raise such intentions. © 2011 American Association of Blood Banks.

Dispositional Mindfulness Predicts Enhanced Smoking Cessation and Smoking Lapse Recovery

PubMed Central

Heppner, Whitney L.; Spears, Claire Adams; Correa-Fernández, Virmarie; Castro, Yessenia; Li, Yisheng; Guo, Beibei; Reitzel, Lorraine R.; Vidrine, Jennifer Irvin; Mazas, Carlos A.; Cofta-Woerpel, Ludmila; Cinciripini, Paul M.; Ahluwalia, Jasjit S.; Wetter, David W.

2016-01-01

Background Although mindfulness has been hypothesized to promote health behaviors, no research has examined how dispositional mindfulness might influence the process of smoking cessation. Purpose The current study investigated dispositional mindfulness, smoking abstinence, and recovery from a lapse among African American smokers. Methods Participants were 399 African Americans seeking smoking cessation treatment (treatments did not include any components related to mindfulness). Dispositional mindfulness and other psychosocial measures were obtained pre-quit; smoking abstinence was assessed 3 days, 31 days, and 26 weeks post-quit. Results Individuals higher in dispositional mindfulness were more likely to quit smoking both initially and over time. Moreover, among individuals who had lapsed at day 3, those higher in mindfulness were more likely to recover abstinence by the later time points. The mindfulness-early abstinence association was mediated by lower negative affect, lower expectancies to regulate affect via smoking, and higher perceived social support. Conclusions Results suggest that mindfulness might enhance smoking cessation among African American smokers by operating on mechanisms posited by prominent models of addiction. PMID:26743533

One-to-one neuron-electrode interfacing.

PubMed

Greenbaum, Alon; Anava, Sarit; Ayali, Amir; Shein, Mark; David-Pur, Moshe; Ben-Jacob, Eshel; Hanein, Yael

2009-09-15

The question of neuronal network development and organization is a principle one, which is closely related to aspects of neuronal and network form-function interactions. In-vitro two-dimensional neuronal cultures have proved to be an attractive and successful model for the study of these questions. Research is constraint however by the search for techniques aimed at culturing stable networks, whose electrical activity can be reliably and consistently monitored. A simple approach to form small interconnected neuronal circuits while achieving one-to-one neuron-electrode interfacing is presented. Locust neurons were cultured on a novel bio-chip consisting of carbon-nanotube multi-electrode-arrays. The cells self-organized to position themselves in close proximity to the bio-chip electrodes. The organization of the cells on the electrodes was analyzed using time lapse microscopy, fluorescence imaging and scanning electron microscopy. Electrical recordings from well identified cells is presented and discussed. The unique properties of the bio-chip and the specific neuron-nanotube interactions, together with the use of relatively large insect ganglion cells, allowed long-term stabilization (as long as 10 days) of predefined neural network topology as well as high fidelity electrical recording of individual neuron firing. This novel preparation opens ample opportunity for future investigation into key neurobiological questions and principles.

Timing and Variability of Postpartum Sleep in Relation to Daytime Performance

PubMed Central

McBean, Amanda L.; Montgomery-Downs, Hawley E.

2013-01-01

Postpartum women have highly disturbed sleep, also known as sleep fragmentation. Fragmentation extends their total sleep period, also disrupting sleep timing. A stable and earlier sleep period among non-postpartum populations are related to better performance, physical health, and mental health. However, sleep timing has not been examined among postpartum women who are also vulnerable to daytime impairment. The study objective was to examine how the timing and regularity of sleep during the early postpartum period are related to daytime functioning across postpartum weeks 2-13. In this field-based study, 71 primiparous women wore an actigraph, a small wrist-worn device that monitors sleep and sleep timing, for the 12-week study period. Mothers self-administered a 5-minute psychomotor vigilance test (PVT) each morning to evaluate the number of >500ms response lapses. They also completed a Morningness-Eveningness scale at the beginning of the study to identify chronotype. After controlling for maternal age, earlier sleep timing was associated with significantly fewer PVT lapses at postpartum weeks 9,12; a more stable sleep midpoint was associated with significantly fewer PVT lapses at postpartum weeks 2,5-13. Earlier sleep midpoints were related to more stable sleep midpoints at postpartum week 2 and a morning-type chronotype. An earlier sleep midpoint was also associated with a reduced slope of worsening PVT lapses across weeks. Across the first 12 postpartum weeks, women with earlier or more stable sleep periods had less daytime impairment than women with later or more variable sleep midpoints. Postpartum women with earlier sleep midpoints also showed less severe decrements in performance across time, which has been attributed to cumulative impacts of sleep disturbance. These data suggest the sleep period, in addition to sleep duration and fragmentation, should be more closely examined, particularly among vulnerable women, as it may affect the neurobehavioral performance of new mothers. PMID:24041725

Slow speed—fast motion: time-lapse recordings in physics education

NASA Astrophysics Data System (ADS)

Vollmer, Michael; Möllmann, Klaus-Peter

2018-05-01

Video analysis with a 30 Hz frame rate is the standard tool in physics education. The development of affordable high-speed-cameras has extended the capabilities of the tool for much smaller time scales to the 1 ms range, using frame rates of typically up to 1000 frames s-1, allowing us to study transient physics phenomena happening too fast for the naked eye. Here we want to extend the range of phenomena which may be studied by video analysis in the opposite direction by focusing on much longer time scales ranging from minutes, hours to many days or even months. We discuss this time-lapse method, needed equipment and give a few hints of how to produce respective recordings for two specific experiments.

Fluorescence Time-lapse Imaging of the Complete S. venezuelae Life Cycle Using a Microfluidic Device.

PubMed

Schlimpert, Susan; Flärdh, Klas; Buttner, Mark

2016-02-28

Live-cell imaging of biological processes at the single cell level has been instrumental to our current understanding of the subcellular organization of bacterial cells. However, the application of time-lapse microscopy to study the cell biological processes underpinning development in the sporulating filamentous bacteria Streptomyces has been hampered by technical difficulties. Here we present a protocol to overcome these limitations by growing the new model species, Streptomyces venezuelae, in a commercially available microfluidic device which is connected to an inverted fluorescence widefield microscope. Unlike the classical model species, Streptomyces coelicolor, S. venezuelae sporulates in liquid, allowing the application of microfluidic growth chambers to cultivate and microscopically monitor the cellular development and differentiation of S. venezuelae over long time periods. In addition to monitoring morphological changes, the spatio-temporal distribution of fluorescently labeled target proteins can also be visualized by time-lapse microscopy. Moreover, the microfluidic platform offers the experimental flexibility to exchange the culture medium, which is used in the detailed protocol to stimulate sporulation of S. venezuelae in the microfluidic chamber. Images of the entire S. venezuelae life cycle are acquired at specific intervals and processed in the open-source software Fiji to produce movies of the recorded time-series.

Fluorescence Time-lapse Imaging of the Complete S. venezuelae Life Cycle Using a Microfluidic Device

PubMed Central

Schlimpert, Susan; Flärdh, Klas; Buttner, Mark

2016-01-01

Live-cell imaging of biological processes at the single cell level has been instrumental to our current understanding of the subcellular organization of bacterial cells. However, the application of time-lapse microscopy to study the cell biological processes underpinning development in the sporulating filamentous bacteria Streptomyces has been hampered by technical difficulties. Here we present a protocol to overcome these limitations by growing the new model species, Streptomyces venezuelae, in a commercially available microfluidic device which is connected to an inverted fluorescence widefield microscope. Unlike the classical model species, Streptomyces coelicolor, S. venezuelae sporulates in liquid, allowing the application of microfluidic growth chambers to cultivate and microscopically monitor the cellular development and differentiation of S. venezuelae over long time periods. In addition to monitoring morphological changes, the spatio-temporal distribution of fluorescently labeled target proteins can also be visualized by time-lapse microscopy. Moreover, the microfluidic platform offers the experimental flexibility to exchange the culture medium, which is used in the detailed protocol to stimulate sporulation of S. venezuelae in the microfluidic chamber. Images of the entire S. venezuelae life cycle are acquired at specific intervals and processed in the open-source software Fiji to produce movies of the recorded time-series. PMID:26967231

Time-Based Measurement of Personal Mite Allergen Bioaerosol Exposure over 24 Hour Periods

PubMed Central

Tovey, Euan R.; Liu-Brennan, Damien; Garden, Frances L.; Oliver, Brian G.; Perzanowski, Matthew S.; Marks, Guy B.

2016-01-01

Allergic diseases such as asthma and rhinitis are common in many countries. Globally the most common allergen associated with symptoms is produced by house dust mites. Although the bed has often been cited as the main site of exposure to mite allergens, surprisingly this has not yet been directly established by measurement due to a lack of suitable methods. Here we report on the development of novel methods to determine the pattern of personal exposure to mite allergen bioaerosols over 24-hour periods and applied this in a small field study using 10 normal adults. Air was sampled using a miniature time-based air-sampler of in-house design located close to the breathing zone of the participants, co-located with a miniature time-lapse camera. Airborne particles, drawn into the sampler at 2L/min via a narrow slot, were impacted onto the peripheral surface of a disk mounted on the hour-hand of either a 12 or 24 hour clock motor. The impaction surface was either an electret cloth, or an adhesive film; both novel for these purposes. Following a review of the time-lapse images, disks were post-hoc cut into subsamples corresponding to eight predetermined categories of indoor or outdoor location, extracted and analysed for mite allergen Der p 1 by an amplified ELISA. Allergen was detected in 57.2% of the total of 353 subsamples collected during 20 days of sampling. Exposure patterns varied over time. Higher concentrations of airborne mite allergen were typically measured in samples collected from domestic locations in the day and evening. Indoor domestic Der p 1 exposures accounted for 59.5% of total exposure, whereas total in-bed-asleep exposure, which varied 80 fold between individuals, accounted overall for 9.85% of total exposure, suggesting beds are not often the main site of exposure. This study establishes the feasibility of novel methods for determining the time-geography of personal exposure to many bioaerosols and identifies new areas for future technical development and clinical applications. PMID:27192200

Time-Based Measurement of Personal Mite Allergen Bioaerosol Exposure over 24 Hour Periods.

PubMed

Tovey, Euan R; Liu-Brennan, Damien; Garden, Frances L; Oliver, Brian G; Perzanowski, Matthew S; Marks, Guy B

2016-01-01

Allergic diseases such as asthma and rhinitis are common in many countries. Globally the most common allergen associated with symptoms is produced by house dust mites. Although the bed has often been cited as the main site of exposure to mite allergens, surprisingly this has not yet been directly established by measurement due to a lack of suitable methods. Here we report on the development of novel methods to determine the pattern of personal exposure to mite allergen bioaerosols over 24-hour periods and applied this in a small field study using 10 normal adults. Air was sampled using a miniature time-based air-sampler of in-house design located close to the breathing zone of the participants, co-located with a miniature time-lapse camera. Airborne particles, drawn into the sampler at 2L/min via a narrow slot, were impacted onto the peripheral surface of a disk mounted on the hour-hand of either a 12 or 24 hour clock motor. The impaction surface was either an electret cloth, or an adhesive film; both novel for these purposes. Following a review of the time-lapse images, disks were post-hoc cut into subsamples corresponding to eight predetermined categories of indoor or outdoor location, extracted and analysed for mite allergen Der p 1 by an amplified ELISA. Allergen was detected in 57.2% of the total of 353 subsamples collected during 20 days of sampling. Exposure patterns varied over time. Higher concentrations of airborne mite allergen were typically measured in samples collected from domestic locations in the day and evening. Indoor domestic Der p 1 exposures accounted for 59.5% of total exposure, whereas total in-bed-asleep exposure, which varied 80 fold between individuals, accounted overall for 9.85% of total exposure, suggesting beds are not often the main site of exposure. This study establishes the feasibility of novel methods for determining the time-geography of personal exposure to many bioaerosols and identifies new areas for future technical development and clinical applications.

Detection de fuite dans les barrages en remblai par la methode de polarisation spontanee et par tomographie electrique: Cas de la jonction de deux barrages en remblai

NASA Astrophysics Data System (ADS)

Nzumotcha Tchoumkam, Linda Armelle

The infiltration through the core of foundation of embankment dams is a problem which is worrying for safety and economical dams. The mechanism of infiltration can be progressive and can disturb the stability or the durability of the structures. Consequently, its evolution can undermine public security. Statistics made for 11192 embankment dams through the world showed that until 1986, 48% of damages have been caused by internal erosion. This internal erosion was generated by infiltration through the core or the foundation of embankment dam. Electrical, electromagnetic and thermometric methods are usually considered as investigation methods. The goal of this work is to study the sensibility of the self-potential method (S.P.) to detect seepage for the case of embankment dams. We used S.P jointly with electrical resistance tomography (ERT). To attain this objective, we acquired self-potential and resistivity data with periodic changes of the water level in the reservoir. These changes were made every spring (in November) and every summer (in April) at the emptying and impounding of the reservoir. For this project, measures have been conducted over a period of two years (2008-2010). Before that, thermometry, self-potential and magnetic methods were applied on the site to acquire information about seepage and its approximate position. Flow rate was also measured. In April 2010, injection of grout was used to clog seepage. The measurements allowed to represent the variation of potential with time and space. That permitted to make a distinction between different sources of self-potential signal. The mapping of the electric potential during the emptying and the impounding of the reservoir showed a negative anomaly which correlate to an outflow located in the upstream of the dam. The monitoring of the S.P. signal permitted to dissociate an anomaly zone which can be related to the site of injection of grout. The gradient of self-potential decreased with the increase of pressure gradient. We have computed the effective electro kinetic (EK) coupling coefficient of the dam from the variation of the potential with water level. Time-lapse ERT is used to control the variation of electrical conductivity of the material together with changes in water level. The anomaly in the time-lapse represented agrees with the outflow. We also propose a 3D numerical model to interpret the measurements in a semi-quantitative manner. Comparing between results of modeling and the survey data, differences are noted that can be explained in different ways. More work would be needed to elucidate those differences, in particular with the measurement strategy and the estimation of coupling coefficients. Nevertheless, the proposed approach allowed to underline different variations under the ground. These results have also been used to discuss the limitations of the self-potential method applied to detect seepage in the dam.

Single embryo transfer by Day 3 time-lapse selection versus Day 5 conventional morphological selection: a randomized, open-label, non-inferiority trial.

PubMed

Yang, Lanlin; Cai, Sufen; Zhang, Shuoping; Kong, Xiangyi; Gu, Yifan; Lu, Changfu; Dai, Jing; Gong, Fei; Lu, Guangxiu; Lin, Ge

2018-05-01

Does single cleavage-stage (Day 3) embryo transfer using a time-lapse (TL) hierarchical classification model achieve comparable ongoing pregnancy rates (OPR) to single blastocyst (Day 5) transfer by conventional morphological (CM) selection? Day 3 single embryo transfer (SET) with a hierarchical classification model had a significantly lower OPR compared with Day 5 SET with CM selection. Cleavage-stage SET is an alternative to blastocyst SET. Time-lapse imaging assists better embryo selection, based on studies of pregnancy outcomes when adding time-lapse imaging to CM selection at the cleavage or blastocyst stage. This single-centre, randomized, open-label, active-controlled, non-inferiority study included 600 women between October 2015 and April 2017. Eligible patients were Chinese females, aged ≤36 years, who were undergoing their first or second fresh IVF cycle using their own oocytes, and who had FSH levels ≤12 IU/mL on Day 3 of the cycle and 10 or more oocytes retrieved. Patients who had underlying uterine conditions, oocyte donation, recurrent pregnancy loss, abnormal oocytes or <6 normally fertilized embryos (2PN) were excluded from the study participation. Patients were randomized 1:1 to either the cleavage-stage SET with a time-lapse hierarchical classification model for selection (D3 + TL) or blastocyst SET with CM selection (D5 + CM). All normally fertilized zygotes were cultured in Primo Vision. The study was conducted at a tertiary IVF centre (CITIC-Xiangya) and OPR was the primary outcome. A total of 600 patients were randomized to the two groups, among which 585 (D3 + TL = 290, D5 + CM = 295) were included in the Modified-intention-to-treat (mITT) population and 517 (D3 + TL = 261, D5 + CM = 256) were included in the PP population. In the per protocol (PP) population, OPR was significantly lower in the D3 group (59.4%, 155/261) than in the D5 group (68.4%, 175/256) (difference: -9.0%, 95% CI: -17.1%, -0.7%, P = 0.03). Analysis in mITT population showed a marginally significant difference in the OPR between the D3 + TL and D5 + CM groups (56.6 versus 64.1%, difference: -7.5%, 95% CI: -15.4%, 0.4%, P = 0.06). The D3 + TL group resulted in a markedly lower implantation rate than the D5 + CM group (64.4 versus 77.0%; P = 0.002) in the PP analysis, however, the early miscarriage rate did not significantly differ between the two groups. The study lacked a direct comparison between time-lapse and CM selections at cleavage-stage SET and was statistically underpowered to detect non-inferiority. The subject's eligibility criteria favouring women with a good prognosis for IVF weakened the generalizability of the results. The OPR from Day 3 cleavage-stage SET using hierarchical classification time-lapse selection was significantly lower compared with that from Day 5 blastocyst SET using conventional morphology, yet it appeared to be clinically acceptable in women underwent IVF. This study is supported by grants from Ferring Pharmaceuticals and the Program for New Century Excellent Talents in University, China. ChiCTR-ICR-15006600. 16 June 2015. 1 October 2015.

Delivering "Just-In-Time" Smoking Cessation Support Via Mobile Phones: Current Knowledge and Future Directions.

PubMed

Naughton, Felix

2016-05-28

Smoking lapses early on during a quit attempt are highly predictive of failing to quit. A large proportion of these lapses are driven by cravings brought about by situational and environmental cues. Use of cognitive-behavioral lapse prevention strategies to combat cue-induced cravings is associated with a reduced risk of lapse, but evidence is lacking in how these strategies can be effectively promoted. Unlike most traditional methods of delivering behavioral support, mobile phones can in principle deliver automated support, including lapse prevention strategy recommendations, Just-In-Time (JIT) for when a smoker is most vulnerable, and prevent early lapse. JIT support can be activated by smokers themselves (user-triggered), by prespecified rules (server-triggered) or through sensors that dynamically monitor a smoker's context and trigger support when a high risk environment is sensed (context-triggered), also known as a Just-In-Time Adaptive Intervention (JITAI). However, research suggests that user-triggered JIT cessation support is seldom used and existing server-triggered JIT support is likely to lack sufficient accuracy to effectively target high-risk situations in real time. Evaluations of mobile phone cessation interventions that include user and/or server-triggered JIT support have yet to adequately assess whether this improves management of high risk situations. While context-triggered systems have the greatest potential to deliver JIT support, there are, as yet, no impact evaluations of such systems. Although it may soon be feasible to learn about and monitor a smoker's context unobtrusively using their smartphone without burdensome data entry, there are several potential advantages to involving the smoker in data collection. This commentary describes the current knowledge on the potential for mobile phones to deliver automated support to help smokers manage or cope with high risk environments or situations for smoking, known as JIT support. The article categorizes JIT support into three main types: user-triggered, server-triggered, and context-triggered. For each type of JIT support, a description of the evidence and their potential to effectively target specific high risk environments or situations is described. The concept of unobtrusive sensing without user data entry to inform the delivery of JIT support is finally discussed in relation to potential advantages and disadvantages for behavior change. © The Author 2016. Published by Oxford University Press on behalf of the Society for Research on Nicotine and Tobacco. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Time-lapse electrical impedance spectroscopy for monitoring the cell cycle of single immobilized S. pombe cells.

PubMed

Zhu, Zhen; Frey, Olivier; Haandbaek, Niels; Franke, Felix; Rudolf, Fabian; Hierlemann, Andreas

2015-11-26

As a complement and alternative to optical methods, wide-band electrical impedance spectroscopy (EIS) enables multi-parameter, label-free and real-time detection of cellular and subcellular features. We report on a microfluidics-based system designed to reliably capture single rod-shaped Schizosaccharomyces pombe cells by applying suction through orifices in a channel wall. The system enables subsequent culturing of immobilized cells in an upright position, while dynamic changes in cell-cycle state and morphology were continuously monitored through EIS over a broad frequency range. Besides measuring cell growth, clear impedance signals for nuclear division have been obtained. The EIS system has been characterized with respect to sensitivity and detection limits. The spatial resolution in measuring cell length was 0.25 μm, which corresponds to approximately a 5-min interval of cell growth under standard conditions. The comprehensive impedance data sets were also used to determine the occurrence of nuclear division and cytokinesis. The obtained results have been validated through concurrent confocal imaging and plausibilized through comparison with finite-element modeling data. The possibility to monitor cellular and intracellular features of single S. pombe cells during the cell cycle at high spatiotemporal resolution renders the presented microfluidics-based EIS system a suitable tool for dynamic single-cell investigations.

Time-lapse electrical impedance spectroscopy for monitoring the cell cycle of single immobilized S. pombe cells

PubMed Central

Zhu, Zhen; Frey, Olivier; Haandbaek, Niels; Franke, Felix; Rudolf, Fabian; Hierlemann, Andreas

2015-01-01

As a complement and alternative to optical methods, wide-band electrical impedance spectroscopy (EIS) enables multi-parameter, label-free and real-time detection of cellular and subcellular features. We report on a microfluidics-based system designed to reliably capture single rod-shaped Schizosaccharomyces pombe cells by applying suction through orifices in a channel wall. The system enables subsequent culturing of immobilized cells in an upright position, while dynamic changes in cell-cycle state and morphology were continuously monitored through EIS over a broad frequency range. Besides measuring cell growth, clear impedance signals for nuclear division have been obtained. The EIS system has been characterized with respect to sensitivity and detection limits. The spatial resolution in measuring cell length was 0.25 μm, which corresponds to approximately a 5-min interval of cell growth under standard conditions. The comprehensive impedance data sets were also used to determine the occurrence of nuclear division and cytokinesis. The obtained results have been validated through concurrent confocal imaging and plausibilized through comparison with finite-element modeling data. The possibility to monitor cellular and intracellular features of single S. pombe cells during the cell cycle at high spatiotemporal resolution renders the presented microfluidics-based EIS system a suitable tool for dynamic single-cell investigations. PMID:26608589

Predictors of smoking lapse in a human laboratory paradigm.

PubMed

Roche, Daniel J O; Bujarski, Spencer; Moallem, Nathasha R; Guzman, Iris; Shapiro, Jenessa R; Ray, Lara A

2014-07-01

During a smoking quit attempt, a single smoking lapse is highly predictive of future relapse. While several risk factors for a smoking lapse have been identified during clinical trials, a laboratory model of lapse was until recently unavailable and, therefore, it is unclear whether these characteristics also convey risk for lapse in a laboratory environment. The primary study goal was to examine whether real-world risk factors of lapse are also predictive of smoking behavior in a laboratory model of smoking lapse. After overnight abstinence, 77 smokers completed the McKee smoking lapse task, in which they were presented with the choice of smoking or delaying in exchange for monetary reinforcement. Primary outcome measures were the latency to initiate smoking behavior and the number of cigarettes smoked during the lapse. Several baseline measures of smoking behavior, mood, and individual traits were examined as predictive factors. Craving to relieve the discomfort of withdrawal, withdrawal severity, and tension level were negatively predictive of latency to smoke. In contrast, average number of cigarettes smoked per day, withdrawal severity, level of nicotine dependence, craving for the positive effects of smoking, and craving to relieve the discomfort of withdrawal were positively predictive of number of cigarettes smoked. The results suggest that real-world risk factors for smoking lapse are also predictive of smoking behavior in a laboratory model of lapse. Future studies using the McKee lapse task should account for between subject differences in the unique factors that independently predict each outcome measure.

The effects of cockpit environment on long-term pilot performance

NASA Technical Reports Server (NTRS)

Stave, A. M.

1977-01-01

A fixed-base helicopter simulator was used to examine pilot performance as influenced by noise, vibration, and fatigue. Subjects flew the simulator for periods ranging between three and eight hours while exposed to vibrations (at 17 Hz) ranging from 0.1 to 0.3 g, and noise stimuli varying between 74 (ambient) and 100 dB. Despite reports of extreme fatigue on these long flights, subject performance did not degrade. Within the limits of this study, performance tended to improve as environmental stress increased. However, subjects did suffer from lapses resulting in abnormally poor performance. These lapses are probably of short duration (seconds) and occur at unpredictable times. If such lapses occur in actual flight, they could provide an explanation for many so-called 'pilot error' accidents.

Role of interstitial branching in the development of visual corticocortical connections: a time-lapse and fixed-tissue analysis.

PubMed

Ruthazer, Edward S; Bachleda, Amelia R; Olavarria, Jaime F

2010-12-15

We combined fixed-tissue and time-lapse analyses to investigate the axonal branching phenomena underlying the development of topographically organized ipsilateral projections from area 17 to area 18a in the rat. These complementary approaches allowed us to relate static, large-scale information provided by traditional fixed-tissue analysis to highly dynamic, local, small-scale branching phenomena observed with two-photon time-lapse microscopy in acute slices of visual cortex. Our fixed-tissue data revealed that labeled area 17 fibers invaded area 18a gray matter at topographically restricted sites, reaching superficial layers in significant numbers by postnatal day 6 (P6). Moreover, most parental axons gave rise to only one or occasionally a small number of closely spaced interstitial branches beneath 18a. Our time-lapse data showed that many filopodium-like branches emerged along parental axons in white matter or deep layers in area 18a. Most of these filopodial branches were transient, often disappearing after several minutes to hours of exploratory extension and retraction. These dynamic behaviors decreased significantly from P4, when the projection is first forming, through the second postnatal week, suggesting that the expression of, or sensitivity to, cortical cues promoting new branch addition in the white matter is developmentally down-regulated coincident with gray matter innervation. Together, these data demonstrate that the development of topographically organized corticocortical projections in rats involves extensive exploratory branching along parental axons and invasion of cortex by only a small number of interstitial branches, rather than the widespread innervation of superficial cortical layers by an initially exuberant population of branches. © 2010 Wiley-Liss, Inc.

Labour-efficient in vitro lymphocyte population tracking and fate prediction using automation and manual review.

PubMed

Chakravorty, Rajib; Rawlinson, David; Zhang, Alan; Markham, John; Dowling, Mark R; Wellard, Cameron; Zhou, Jie H S; Hodgkin, Philip D

2014-01-01

Interest in cell heterogeneity and differentiation has recently led to increased use of time-lapse microscopy. Previous studies have shown that cell fate may be determined well in advance of the event. We used a mixture of automation and manual review of time-lapse live cell imaging to track the positions, contours, divisions, deaths and lineage of 44 B-lymphocyte founders and their 631 progeny in vitro over a period of 108 hours. Using this data to train a Support Vector Machine classifier, we were retrospectively able to predict the fates of individual lymphocytes with more than 90% accuracy, using only time-lapse imaging captured prior to mitosis or death of 90% of all cells. The motivation for this paper is to explore the impact of labour-efficient assistive software tools that allow larger and more ambitious live-cell time-lapse microscopy studies. After training on this data, we show that machine learning methods can be used for realtime prediction of individual cell fates. These techniques could lead to realtime cell culture segregation for purposes such as phenotype screening. We were able to produce a large volume of data with less effort than previously reported, due to the image processing, computer vision, tracking and human-computer interaction tools used. We describe the workflow of the software-assisted experiments and the graphical interfaces that were needed. To validate our results we used our methods to reproduce a variety of published data about lymphocyte populations and behaviour. We also make all our data publicly available, including a large quantity of lymphocyte spatio-temporal dynamics and related lineage information.

In vivo Postnatal Electroporation and Time-lapse Imaging of Neuroblast Migration in Mouse Acute Brain Slices

PubMed Central

Oudin, Madeleine Julie; Doherty, Patrick; Lalli, Giovanna

2013-01-01

The subventricular zone (SVZ) is one of the main neurogenic niches in the postnatal brain. Here, neural progenitors proliferate and give rise to neuroblasts able to move along the rostral migratory stream (RMS) towards the olfactory bulb (OB). This long-distance migration is required for the subsequent maturation of newborn neurons in the OB, but the molecular mechanisms regulating this process are still unclear. Investigating the signaling pathways controlling neuroblast motility may not only help understand a fundamental step in neurogenesis, but also have therapeutic regenerative potential, given the ability of these neuroblasts to target brain sites affected by injury, stroke, or degeneration. In this manuscript we describe a detailed protocol for in vivo postnatal electroporation and subsequent time-lapse imaging of neuroblast migration in the mouse RMS. Postnatal electroporation can efficiently transfect SVZ progenitor cells, which in turn generate neuroblasts migrating along the RMS. Using confocal spinning disk time-lapse microscopy on acute brain slice cultures, neuroblast migration can be monitored in an environment closely resembling the in vivo condition. Moreover, neuroblast motility can be tracked and quantitatively analyzed. As an example, we describe how to use in vivo postnatal electroporation of a GFP-expressing plasmid to label and visualize neuroblasts migrating along the RMS. Electroporation of shRNA or CRE recombinase-expressing plasmids in conditional knockout mice employing the LoxP system can also be used to target genes of interest. Pharmacological manipulation of acute brain slice cultures can be performed to investigate the role of different signaling molecules in neuroblast migration. By coupling in vivo electroporation with time-lapse imaging, we hope to understand the molecular mechanisms controlling neuroblast motility and contribute to the development of novel approaches to promote brain repair. PMID:24326479

Role of Interstitial Branching in the Development of Visual Corticocortical Connections: A Time-Lapse and Fixed-Tissue Analysis

PubMed Central

Ruthazer, Edward S.; Bachleda, Amelia R.; Olavarria, Jaime F.

2013-01-01

We combined fixed-tissue and time-lapse analyses to investigate the axonal branching phenomena underlying the development of topographically organized ipsilateral projections from area 17 to area 18a in the rat. These complementary approaches allowed us to relate static, large-scale information provided by traditional fixed-tissue analysis to highly dynamic, local, small-scale branching phenomena observed with two-photon time-lapse microscopy in acute slices of visual cortex. Our fixed-tissue data revealed that labeled area 17 fibers invaded area 18a gray matter at topographically restricted sites, reaching superficial layers in significant numbers by postnatal day 6 (P6). Moreover, most parental axons gave rise to only one or occasionally a small number of closely spaced interstitial branches beneath 18a. Our time-lapse data showed that many filopodium-like branches emerged along parental axons in white matter or deep layers in area 18a. Most of these filopo-dial branches were transient, often disappearing after several minutes to hours of exploratory extension and retraction. These dynamic behaviors decreased significantly from P4, when the projection is first forming, through the second postnatal week, suggesting that the expression of, or sensitivity to, cortical cues promoting new branch addition in the white matter is developmentally down-regulated coincident with gray matter innervation. Together, these data demonstrate that the development of topographically organized corticocortical projections in rats involves extensive exploratory branching along parental axons and invasion of cortex by only a small number of interstitial branches, rather than the widespread innervation of superficial cortical layers by an initially exuberant population of branches. PMID:21031561

Improving Satellite-Based Snowfall Estimation: A New Method for Classifying Precipitation Phase and Estimating Snowfall Rate

NASA Astrophysics Data System (ADS)

Sims, Elizabeth M.

In order to study the impact of climate change on the Earth's hydrologic cycle, global information about snowfall is needed. To achieve global measurements of snowfall over both land and ocean, satellites are necessary. While satellites provide the best option for making measurements on a global scale, the task of estimating snowfall rate from these measurements is a complex problem. Satellite-based radar, for example, measures effective radar reflectivity, Ze, which can be converted to snowfall rate, S, via a Ze-S relation. Choosing the appropriate Ze-S relation to apply is a complicated problem, however, because quantities such as particle shape, size distribution, and terminal velocity are often unknown, and these quantities directly affect the Ze-S relation. Additionally, it is important to correctly classify the phase of precipitation. A misclassification can result in order-of-magnitude errors in the estimated precipitation rate. Using global ground-based observations over multiple years, the influence of different geophysical parameters on precipitation phase is investigated, with the goal of obtaining an improved method for determining precipitation phase. The parameters studied are near-surface air temperature, atmospheric moisture, low-level vertical temperature lapse rate, surface skin temperature, surface pressure, and land cover type. To combine the effects of temperature and moisture, wet-bulb temperature, instead of air temperature, is used as a key parameter for separating solid and liquid precipitation. Results show that in addition to wet-bulb temperature, vertical temperature lapse rate also affects the precipitation phase. For example, at a near-surface wet-bulb temperature of 0°C, a lapse rate of 6°C km-1 results in an 86 percent conditional probability of solid precipitation, while a lapse rate of -2°C km-1 results in a 45 percent probability. For near-surface wet-bulb temperatures less than 0°C, skin temperature affects precipitation phase, although the effect appears to be minor. Results also show that surface pressure appears to influence precipitation phase in some cases, however, this dependence is not clear on a global scale. Land cover type does not appear to affect precipitation phase. Based on these findings, a parameterization scheme has been developed that accepts available meteorological data as input, and returns the conditional probability of solid precipitation. Ze-S relations for various particle shapes, size distributions, and terminal velocities have been developed as part of this research. These Ze-S relations have been applied to radar reflectivity data from the CloudSat Cloud Profiling Radar to calculate the annual mean snowfall rate. The calculated snowfall rates are then compared to surface observations of snowfall. An effort to determine which particle shape best represents the type of snow falling in various locations across the United States has been made. An optimized Ze-S relation has been developed, which combines multiple Ze-S relations in order to minimize error when compared to the surface snowfall observations. Additionally, the resulting surface snowfall rate is compared with the CloudSat standard product for snowfall rate.

Joint Inversion of Multi-type and Time-lapse Airborne Electromagnetic Data Sets for Tempo-spatial Variation of Groundwater Salinity

NASA Astrophysics Data System (ADS)

Yang, D.; Oldenburg, D.

2016-12-01

The salinization of the floodplains of Lower Murray River in South Australia has caused negative consequences to the local ecosystem. As part of the Living Murray Initiative, the Clark's Floodplain at Bookpurnong was chosen to examine the effectiveness of different intervention methods from 2005 to 2008. Because of the link between groundwater salinity and electric conductivity, electromagnetic (EM) methods have been an integrated part of the project to test it as a cost-effective tool for monitoring. In this paper, we analyze two airborne EM surveys that assess the salinization at the regional scale: the SkyTEM in 2006 and the RESOLVE in 2008. Conventional interpretation often inverts those data sets separately using the 1D layered earth modeling, which often produces inconsistent images if different surveys are carried out at different times. Here we propose a new approach that considers the coherence in time and across systems. We allow each data set to iteratively construct its own model with guidance from a common reference model that is updated in a democratic voting procedure after every iteration. There are two possible outcomes. If the data sets are intrinsically compatible, the individual models will converge to essentially the same model, like in the regular unimodal joint inversion. If there are survey-specific errors or a change of ground truth, the inversion can still fit the data but leaves discrepancy in the models. By applying this approach to the two data sets at Bookpurnong, we identify an area of increased conductivity at the midstream section of the river that can only be explained by a temporal variation of salinity, a plausible evidence of escalated saline water intrusion due to irrigation on the nearby riverbank. This study illustrates that multi-type time-lapse EM, in conjunction with advanced inversion techniques, can achieve superior temporal resolution for the purpose of groundwater evaluation and management.

Difficulties with Emotion Regulation and Psychopathology Interact to Predict Early Smoking Cessation Lapse.

PubMed

Farris, Samantha G; Zvolensky, Michael J; Schmidt, Norman B

2016-06-01

There is little knowledge about how emotion regulation difficulties interplay with psychopathology in terms of smoking cessation. Participants ( n = 250; 53.2 % female, M age = 39.5, SD = 13.85) were community-recruited daily smokers (≥8 cigarettes per day) who self-reported motivation to quit smoking; 38.8 % of the sample met criteria for a current (past 12-month) psychological disorder. Emotion regulation deficits were assessed pre-quit using the Difficulties with Emotion Regulation Scale (DERS; Gratz and Roemer in J Psychopathol Behav Assess 26(1):41-54, 2004) and smoking behavior in the 28 days post-quit was assessed using the Timeline Follow-Back (TLFB; Sobell and Sobell in Measuring alcohol consumption: psychosocial and biochemical methods. Humana Press, Totowa, 1992). A Cox proportional-hazard regression analysis was used to model the effects of past-year psychopathology, DERS (total score), and their interaction, in terms of time to lapse post-quit day. After adjusting for the effects of gender, age, pre-quit level of nicotine dependence, and treatment condition, the model revealed a non-significant effect of past-year psychopathology ( OR = 1.14, CI 95 % = 0.82-1.61) and difficulties with emotion regulation ( OR = 1.01, CI 95 % = 1.00-1.01) on likelihood of lapse rate. However, the interactive effect of psychopathology status and difficulties with emotion regulation was significant ( OR = 0.98, CI 95 % = 0.97-0.99). Specifically, there was a significant conditional effect of psychopathology status on lapse rate likelihood at low, but not high, levels of emotion regulation difficulties. Plots of the cumulative survival functions indicated that for smokers without a past-year psychological disorder, those with lower DERS scores relative to elevated DERS scores had significantly lower likelihood of early smoking lapse, whereas for smokers with past-year psychopathology, DERS scores did not differentially impact lapse rate likelihood. Smokers with emotion regulation difficulties may have challenges quitting, and not having such difficulties, especially without psychopathology, decreases the potential likelihood of early lapse.

Application of Electric Double-layer Capacitors for Energy Storage on Electric Railway

NASA Astrophysics Data System (ADS)

Hase, Shin-Ichi; Konishi, Takeshi; Okui, Akinobu; Nakamichi, Yoshinobu; Nara, Hidetaka; Uemura, Tadashi

The methods to stabilize power sources, which are the measures against voltage drop, power loading fluctuation, regeneration power lapse and so on, have been important issues in DC feeding circuits. Therefore, an energy storage medium that uses power efficiently and reduces above-mentioned problems is much concerned about. In recent years, development of energy storage medium is remarkable for drive-power supplies of electric vehicles. A number of applications of energy storage, for instance, battery and flywheel, have been investigated so far. A large-scale electric double-layer capacitor which is rapidly charged and discharged and offers long life, maintenance-free, low pollution and high efficiency, has been developed in wide range. We have compared the ability to charge batteries and electric double-layer capacitors. Therefore, we carried out fundamental studies about electric double-layer capacitors and its control. And we produced a prototype of energy storage for the DC electric railway system that consists of electric double-layer capacitors, diode bridge rectifiers, chopper system and PWM converters. From the charge and discharge tests of the prototype, useful information was obtained. This paper describes its characteristics and experimental results of energy storage system.

Methodology for Time-Domain Estimation of Storm-Time Electric Fields Using the 3D Earth Impedance

NASA Astrophysics Data System (ADS)

Kelbert, A.; Balch, C. C.; Pulkkinen, A. A.; Egbert, G. D.; Love, J. J.; Rigler, E. J.; Fujii, I.

2016-12-01

Magnetic storms can induce geoelectric fields in the Earth's electrically conducting interior, interfering with the operations of electric-power grid industry. The ability to estimate these electric fields at Earth's surface in close to real-time and to provide local short-term predictions would improve the ability of the industry to protect their operations. At any given time, the electric field at the Earth's surface is a function of the time-variant magnetic activity (driven by the solar wind), and the local electrical conductivity structure of the Earth's crust and mantle. For this reason, implementation of an operational electric field estimation service requires an interdisciplinary, collaborative effort between space science, real-time space weather operations, and solid Earth geophysics. We highlight in this talk an ongoing collaboration between USGS, NOAA, NASA, Oregon State University, and the Japan Meteorological Agency, to develop algorithms that can be used for scenario analyses and which might be implemented in a real-time, operational setting. We discuss the development of a time domain algorithm that employs discrete time domain representation of the impedance tensor for a realistic 3D Earth, known as the discrete time impulse response (DTIR), convolved with the local magnetic field time series, to estimate the local electric field disturbances. The algorithm is validated against measured storm-time electric field data collected in the United States and Japan. We also discuss our plans for operational real-time electric field estimation using 3D Earth impedances.

Benefits of Sleep Extension on Sustained Attention and Sleep Pressure Before and During Total Sleep Deprivation and Recovery.

PubMed

Arnal, Pierrick J; Sauvet, Fabien; Leger, Damien; van Beers, Pascal; Bayon, Virginie; Bougard, Clément; Rabat, Arnaud; Millet, Guillaume Y; Chennaoui, Mounir

2015-12-01

To investigate the effects of 6 nights of sleep extension on sustained attention and sleep pressure before and during total sleep deprivation and after a subsequent recovery sleep. Subjects participated in two experimental conditions (randomized cross-over design): extended sleep (EXT, 9.8 ± 0.1 h (mean ± SE) time in bed) and habitual sleep (HAB, 8.2 ± 0.1 h time in bed). In each condition, subjects performed two consecutive phases: (1) 6 nights of either EXT or HAB (2) three days in-laboratory: baseline, total sleep deprivation and after 10 h of recovery sleep. Residential sleep extension and sleep performance laboratory (continuous polysomnographic recording). 14 healthy men (age range: 26-37 years). EXT vs. HAB sleep durations prior to total sleep deprivation. Total sleep time and duration of all sleep stages during the 6 nights were significantly higher in EXT than HAB. EXT improved psychomotor vigilance task performance (PVT, both fewer lapses and faster speed) and reduced sleep pressure as evidenced by longer multiple sleep latencies (MSLT) at baseline compared to HAB. EXT limited PVT lapses and the number of involuntary microsleeps during total sleep deprivation. Differences in PVT lapses and speed and MSLT at baseline were maintained after one night of recovery sleep. Six nights of extended sleep improve sustained attention and reduce sleep pressure. Sleep extension also protects against psychomotor vigilance task lapses and microsleep degradation during total sleep deprivation. These beneficial effects persist after one night of recovery sleep. © 2015 Associated Professional Sleep Societies, LLC.

Different effectiveness of closed embryo culture system with time-lapse imaging (EmbryoScope(TM)) in comparison to standard manual embryology in good and poor prognosis patients: a prospectively randomized pilot study.

PubMed

Wu, Yan-Guang; Lazzaroni-Tealdi, Emanuela; Wang, Qi; Zhang, Lin; Barad, David H; Kushnir, Vitaly A; Darmon, Sarah K; Albertini, David F; Gleicher, Norbert

2016-08-24

Previously manual human embryology in many in vitro fertilization (IVF) centers is rapidly being replaced by closed embryo incubation systems with time-lapse imaging. Whether such systems perform comparably to manual embryology in different IVF patient populations has, however, never before been investigated. We, therefore, prospectively compared embryo quality following closed system culture with time-lapse photography (EmbryoScope™) and standard embryology. We performed a two-part prospectively randomized study in IVF (clinical trial # NCT92256309). Part A involved 31 infertile poor prognosis patients prospectively randomized to EmbryoScope™ and standard embryology. Part B involved embryos from 17 egg donor-recipient cycles resulting in large egg/embryo numbers, thus permitting prospectively alternative embryo assignments to EmbryoScope™ and standard embryology. We then compared pregnancy rates and embryo quality on day-3 after fertilization and embryologist time utilized per processed embryo. Part A revealed in poor prognosis patients no differences in day-3 embryo scores, implantation and clinical pregnancy rates between EmbryoScope™ and standard embryology. The EmbryoScope™, however, more than doubled embryology staff time (P < 0.0001). In Part B, embryos grown in the EmbyoScope™ demonstrated significantly poorer day-3 quality (depending on embryo parameter between P = 0.005 and P = 0.01). Suspicion that conical culture dishes of the EmbryoScope™ (EmbryoSlide™) may be the cause was disproven when standard culture dishes demonstrated no outcome difference in standard incubation. Though due to small patient numbers preliminary, this study raises concerns about the mostly uncontrolled introduction of closed incubation systems with time lapse imaging into routine clinical embryology. Appropriately designed and powered prospectively randomized studies appear urgently needed in well-defined patient populations before the uncontrolled utilization of these instruments further expands. NCT02246309 Registered September 18, 2014.

A multimethod Global Sensitivity Analysis to aid the calibration of geomechanical models via time-lapse seismic data

NASA Astrophysics Data System (ADS)

Price, D. C.; Angus, D. A.; Garcia, A.; Fisher, Q. J.; Parsons, S.; Kato, J.

2018-03-01

Time-lapse seismic attributes are used extensively in the history matching of production simulator models. However, although proven to contain information regarding production induced stress change, it is typically only loosely (i.e. qualitatively) used to calibrate geomechanical models. In this study we conduct a multimethod Global Sensitivity Analysis (GSA) to assess the feasibility and aid the quantitative calibration of geomechanical models via near-offset time-lapse seismic data. Specifically, the calibration of mechanical properties of the overburden. Via the GSA, we analyse the near-offset overburden seismic traveltimes from over 4000 perturbations of a Finite Element (FE) geomechanical model of a typical High Pressure High Temperature (HPHT) reservoir in the North Sea. We find that, out of an initially large set of material properties, the near-offset overburden traveltimes are primarily affected by Young's modulus and the effective stress (i.e. Biot) coefficient. The unexpected significance of the Biot coefficient highlights the importance of modelling fluid flow and pore pressure outside of the reservoir. The FE model is complex and highly nonlinear. Multiple combinations of model parameters can yield equally possible model realizations. Consequently, numerical calibration via a large number of random model perturbations is unfeasible. However, the significant differences in traveltime results suggest that more sophisticated calibration methods could potentially be feasible for finding numerous suitable solutions. The results of the time-varying GSA demonstrate how acquiring multiple vintages of time-lapse seismic data can be advantageous. However, they also suggest that significant overburden near-offset seismic time-shifts, useful for model calibration, may take up to 3 yrs after the start of production to manifest. Due to the nonlinearity of the model behaviour, similar uncertainty in the reservoir mechanical properties appears to influence overburden traveltime to a much greater extent. Therefore, reservoir properties must be known to a suitable degree of accuracy before the calibration of the overburden can be considered.

Understanding leachate flow in municipal solid waste landfills by combining time-lapse ERT and subsurface flow modelling - Part II: Constraint methodology of hydrodynamic models.

PubMed

Audebert, M; Oxarango, L; Duquennoi, C; Touze-Foltz, N; Forquet, N; Clément, R

2016-09-01

Leachate recirculation is a key process in the operation of municipal solid waste landfills as bioreactors. To ensure optimal water content distribution, bioreactor operators need tools to design leachate injection systems. Prediction of leachate flow by subsurface flow modelling could provide useful information for the design of such systems. However, hydrodynamic models require additional data to constrain them and to assess hydrodynamic parameters. Electrical resistivity tomography (ERT) is a suitable method to study leachate infiltration at the landfill scale. It can provide spatially distributed information which is useful for constraining hydrodynamic models. However, this geophysical method does not allow ERT users to directly measure water content in waste. The MICS (multiple inversions and clustering strategy) methodology was proposed to delineate the infiltration area precisely during time-lapse ERT survey in order to avoid the use of empirical petrophysical relationships, which are not adapted to a heterogeneous medium such as waste. The infiltration shapes and hydrodynamic information extracted with MICS were used to constrain hydrodynamic models in assessing parameters. The constraint methodology developed in this paper was tested on two hydrodynamic models: an equilibrium model where, flow within the waste medium is estimated using a single continuum approach and a non-equilibrium model where flow is estimated using a dual continuum approach. The latter represents leachate flows into fractures. Finally, this methodology provides insight to identify the advantages and limitations of hydrodynamic models. Furthermore, we suggest an explanation for the large volume detected by MICS when a small volume of leachate is injected. Copyright © 2016 Elsevier Ltd. All rights reserved.

pyGIMLi: An open-source library for modelling and inversion in geophysics

NASA Astrophysics Data System (ADS)

Rücker, Carsten; Günther, Thomas; Wagner, Florian M.

2017-12-01

Many tasks in applied geosciences cannot be solved by single measurements, but require the integration of geophysical, geotechnical and hydrological methods. Numerical simulation techniques are essential both for planning and interpretation, as well as for the process understanding of modern geophysical methods. These trends encourage open, simple, and modern software architectures aiming at a uniform interface for interdisciplinary and flexible modelling and inversion approaches. We present pyGIMLi (Python Library for Inversion and Modelling in Geophysics), an open-source framework that provides tools for modelling and inversion of various geophysical but also hydrological methods. The modelling component supplies discretization management and the numerical basis for finite-element and finite-volume solvers in 1D, 2D and 3D on arbitrarily structured meshes. The generalized inversion framework solves the minimization problem with a Gauss-Newton algorithm for any physical forward operator and provides opportunities for uncertainty and resolution analyses. More general requirements, such as flexible regularization strategies, time-lapse processing and different sorts of coupling individual methods are provided independently of the actual methods used. The usage of pyGIMLi is first demonstrated by solving the steady-state heat equation, followed by a demonstration of more complex capabilities for the combination of different geophysical data sets. A fully coupled hydrogeophysical inversion of electrical resistivity tomography (ERT) data of a simulated tracer experiment is presented that allows to directly reconstruct the underlying hydraulic conductivity distribution of the aquifer. Another example demonstrates the improvement of jointly inverting ERT and ultrasonic data with respect to saturation by a new approach that incorporates petrophysical relations in the inversion. Potential applications of the presented framework are manifold and include time-lapse, constrained, joint, and coupled inversions of various geophysical and hydrological data sets.

Synergic carcinostatic effects of ascorbic acid and hyperthermia on Ehrlich ascites tumor cell.

PubMed

Saitoh, Y; Yoshimoto, T; Kato, S; Miwa, N

2015-06-01

In this study, we evaluated the carcinostatic effects of combined ascorbic acid (AsA) and a capacitive-resistive electric transfer (CRet) hyperthermic apparatus-induced hyperthermic treatment on Ehrlich ascites tumor (EAT) cells. EAT cells were exposed to various AsA (0-10 mM) concentrations for 1 h; they subsequently underwent CRet treatment for 15 min at 42 °C. Cell viability was assessed by the WST-8 assay 24 h after the combined treatment. Reactive oxygen species involvement was evaluated using catalase and tempol; caspase-3/7 activation was determined by their fluorescent substrates; cell proliferation were estimated by time-lapse observation. The effect on the cell cycle was analyzed by flow cytometry. Combined AsA and CRet treatment synergistically suppressed cell viability compared with either treatment alone, and these synergistically carcinostatic effects were evident even at noncytotoxic concentrations of AsA alone (≤ 2 mM). The carcinostatic effects of combined AsA and CRet treatment were attenuated in a dose-dependent manner by catalase addition, but not by the superoxide anion radical scavenger tempol. Time-lapse observation revealed that combined AsA and CRet treatment activated caspase-3/7 at 10-24 h after treatment, accompanied by significant cell growth suppression. Cell cycle analysis revealed that the rate of sub-G1-phase (apoptotic) cells was drastically increased at 12 h and 24 h, and that the G2/M-phase cells gradually increased at 6-24 h after treatment. These results indicate that combined AsA and CRet treatment synergistically inhibits EAT cell growth through G2/M arrest and apoptosis induction via H2O2 generation at lower AsA concentrations; this carcinostatic effect cannot be exerted by AsA alone.

Monitoring an artificial tracer test within streambed sediments with time lapse underwater 3D ERT

NASA Astrophysics Data System (ADS)

Clémence, Houzé; Marc, Pessel; Véronique, Durand; Toihir, Ali

2017-04-01

The stream-aquifer interface is considered a hotspot for environmental and ecological issues. Due to their complexity, the exchange mechanisms occurring between groundwater and surface water at this interface are not yet fully understood. Many studies have focused on the characterization of the two-dimensional distribution of an artificial tracer (generally injected into the stream) within and outside the streambed, but there is insufficient information about the 3D spatial distribution of the tracer fluxes and their temporal variations. We monitored the transport of an artificial solute tracer transport with 3D electrical resistivity tomography (ERT) in order to improve the 3D spatial resolution in the imaging of the first tens of centimeters of streambed sediments and propose an innovative approach of the three-dimensional and temporal observation of the water fluxes. The hydro-geophysical field measurements were made on a small stream located within the Orgeval watershed (Seine et Marne, France). Using a resistivimeter connected to 180 electrodes, 3D electrical resistivity tomograms were made on a riverbed section, as a brine tracer was injected directly into the hyporheic zone. Before the tracer monitoring, the static 3D resistivity tomograms were consistent with the lithological heterogeneities identified at the site. However, this study defines some prerequisites to high-resolution 3D underwater resistivity measurements: for instance, a precise knowledge of an eventual weak electrode contact and a spatial resolution identical in every spatial direction. First results show a rapid development and persistence of a conductive plume around the injection point which disappears progressively after the injection. Within the sediments top layer, preferential flowpaths were highlighted due to the highly heterogeneous medium and hydraulic conductivity. The riverbed topography showed some pool-riffle sequences which conduct the formation of local entering and exiting zones. It seems clear that riverbed heterogeneities drive some local exchanges between surface water and pore water, despite the gaining condition of the stream. Moreover, inversion and data processing appear very sensitive to the boundary condition variations, such as the thickness and the resistivity of the water layer. This makes a quantitative interpretation of tracer fluxes within the hyporheic zone difficult. We demonstrate that for this type of study, knowledge of these conditions and precise monitoring of their fluctuations in time are required.

Microscale Confinement features in microfluidic devices can affect biofilm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kumar, Aloke; Karig, David K; Neethirajan, Suresh

2013-01-01

Biofilms are aggregations of microbes that are encased by extra-cellular polymeric substances (EPS) and adhere to surfaces and interfaces. Biofilm development on abiotic surfaces is a dynamic process, which typically proceeds through an initial phase of adhesion of plankntonic microbes to the substrate, followed by events such as growth, maturation and EPS secretion. However, the coupling of hydrodynamics, microbial adhesion and biofilm growth remain poorly understood. Here, we investigate the effect of semiconfined features on biofilm formation. Using a microfluidic device and fluorescent time-lapse microscopy, we establish that confinement features can significantly affect biofilm formation. Biofilm dynamics change not onlymore » as a function of confinement features, but also of the total fluid flow rate, and our combination of experimental results and numerical simulations reveal insights into the link between hydrodynamics and biofilm formation.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wong, Melissa; Bolovan-Fritts, Cynthia; Dar, Roy D.

Signal transduction circuits have long been known to differentiate between signals by amplifying inputs to different levels. Here, we describe a novel transcriptional circuitry that dynamically converts greater input levels into faster rates, without increasing the final equilibrium level (i.e. a rate amplifier). We utilize time-lapse microscopy to study human herpesvirus (cytomegalovirus) infection of live cells in real time. Strikingly, our results show that transcriptional activators accelerate viral gene expression in single cells without amplifying the steady-state levels of gene products in these cells. Experiment and modeling show that rate amplification operates by dynamically manipulating the traditional gain-bandwidth feedback relationshipmore » from electrical circuit theory to convert greater input levels into faster rates, and is driven by highly self-cooperative transcriptional feedback encoded by the virus s essential transactivator, IE2. This transcriptional rate-amplifier provides a significant fitness advantage for the virus and for minimal synthetic circuits. In general, rate-amplifiers may provide a mechanism for signal-transduction circuits to respond quickly to external signals without increasing steady-state levels of potentially cytotoxic molecules.« less

Non-invasive flow path characterization in a mining-impacted wetland

USGS Publications Warehouse

Bethune, James; Randell, Jackie; Runkel, Robert L.; Singha, Kamini

2015-01-01

Time-lapse electrical resistivity (ER) was used to capture the dilution of a seasonal pulse of acid mine drainage (AMD) contamination in the subsurface of a wetland downgradient of the abandoned Pennsylvania mine workings in central Colorado. Data were collected monthly from mid-July to late October of 2013, with an additional dataset collected in June of 2014. Inversion of the ER data shows the development through time of multiple resistive anomalies in the subsurface, which corroborating data suggest are driven by changes in total dissolved solids (TDS) localized in preferential flow pathways. Sensitivity analyses on a synthetic model of the site suggest that the anomalies would need to be at least several meters in diameter to be adequately resolved by the inversions. The existence of preferential flow paths would have a critical impact on the extent of attenuation mechanisms at the site, and their further characterization could be used to parameterize reactive transport models in developing quantitative predictions of remediation strategies.

Time-lapse monitoring of TLR2 ligand internalization with newly developed fluorescent probes.

PubMed

Arai, Yohei; Yokoyama, Kouhei; Kawahara, Yuki; Feng, Qi; Ohta, Ippei; Shimoyama, Atsushi; Inuki, Shinsuke; Fukase, Koichi; Kabayama, Kazuya; Fujimoto, Yukari

2018-05-23

As a mammalian toll-like receptor family member protein, TLR2 recognizes lipoproteins from bacteria and modulates the immune response by inducing the expression of various cytokines. We have developed fluorescence-labeled TLR2 ligands with either hydrophilic or hydrophobic fluorescence groups. The labeled ligands maintained the inflammatory IL-6 induction activity and enabled us to observe the internalization and colocalization of the TLR2 ligands using live-cell imaging. The time-lapse monitoring in the live-cell imaging of the fluorescence-labeled TLR2 ligand showed that TLR2/CD14 expression in the host cells enhanced the internalization of TLR2 ligand molecules.

3-D time-domain induced polarization tomography: a new approach based on a source current density formulation

NASA Astrophysics Data System (ADS)

Soueid Ahmed, A.; Revil, A.

2018-04-01

Induced polarization (IP) of porous rocks can be associated with a secondary source current density, which is proportional to both the intrinsic chargeability and the primary (applied) current density. This gives the possibility of reformulating the time domain induced polarization (TDIP) problem as a time-dependent self-potential-type problem. This new approach implies a change of strategy regarding data acquisition and inversion, allowing major time savings for both. For inverting TDIP data, we first retrieve the electrical resistivity distribution. Then, we use this electrical resistivity distribution to reconstruct the primary current density during the injection/retrieval of the (primary) current between the current electrodes A and B. The time-lapse secondary source current density distribution is determined given the primary source current density and a distribution of chargeability (forward modelling step). The inverse problem is linear between the secondary voltages (measured at all the electrodes) and the computed secondary source current density. A kernel matrix relating the secondary observed voltages data to the source current density model is computed once (using the electrical conductivity distribution), and then used throughout the inversion process. This recovered source current density model is in turn used to estimate the time-dependent chargeability (normalized voltages) in each cell of the domain of interest. Assuming a Cole-Cole model for simplicity, we can reconstruct the 3-D distributions of the relaxation time τ and the Cole-Cole exponent c by fitting the intrinsic chargeability decay curve to a Cole-Cole relaxation model for each cell. Two simple cases are studied in details to explain this new approach. In the first case, we estimate the Cole-Cole parameters as well as the source current density field from a synthetic TDIP data set. Our approach is successfully able to reveal the presence of the anomaly and to invert its Cole-Cole parameters. In the second case, we perform a laboratory sandbox experiment in which we mix a volume of burning coal and sand. The algorithm is able to localize the burning coal both in terms of electrical conductivity and chargeability.

A laboratory validation study of the time-lapse oscillatory pumping test for leakage detection in geological repositories

NASA Astrophysics Data System (ADS)

Sun, Alexander Y.; Lu, Jiemin; Islam, Akand

2017-05-01

Geologic repositories are extensively used for disposing byproducts in mineral and energy industries. The safety and reliability of these repositories are a primary concern to environmental regulators and the public. Time-lapse oscillatory pumping test (OPT) has been introduced recently as a pressure-based technique for detecting potential leakage in geologic repositories. By routinely conducting OPT at a number of pulsing frequencies, an operator may identify the potential repository anomalies in the frequency domain, alleviating the ambiguity caused by reservoir noise and improving the signal-to-noise ratio. Building on previous theoretical and field studies, this work performed a series of laboratory experiments to validate the concept of time-lapse OPT using a custom made, stainless steel tank under relatively high pressures. The experimental configuration simulates a miniature geologic storage repository consisting of three layers (i.e., injection zone, caprock, and above-zone aquifer). Results show that leakage in the injection zone led to deviations in the power spectrum of observed pressure data, and the amplitude of which also increases with decreasing pulsing frequencies. The experimental results are further analyzed by developing a 3D flow model, using which the model parameters are estimated through frequency domain inversion.

Time-lapse analysis of gravitropism in Ceratodon protonemata

NASA Technical Reports Server (NTRS)

Young, J. C.; Sack, F. D.

1992-01-01

The tip cell of the protonema of the moss Ceratodon purpureus (Hedw.) Brid. is negatively gravitropic when grown in the dark on supplemented agar. Gravitropism, plastid distribution, and plastid movement were studied in living cells using time-lapse video microscopy and infrared light. A wrong-way (downward) curvature preceded upward curvature and was detected as early as 2 minutes after reorientation. Upward curvature began 30-45 minutes after reorientation to the horizontal. Cell division temporarily reversed upward curvature, but did not inhibit wrong-way curvature. Since significant amyloplast sedimentation always occurred before the start of upward curvature, it is possible that these amyloplasts function as statoliths for upward curvature. However, no significant amyloplast sedimentation occurred before wrong-way curvature. Thus, this early phase of gravitropism cannot require plastid sedimentation for gravity sensing. Most plastids moved within and between zones, and plastid zonation was highly dynamic. Plastids moved toward the apex and toward the base of the cell at rates much slower than cytoplasmic streaming. Despite the dynamic nature of plastid movement and zonation, during upward curvature the distance between sedimented plastids and the apex stayed constant. Time-lapse analysis has revealed intriguing events not readily seen previously using destructive sampling.

Noise-free accurate count of microbial colonies by time-lapse shadow image analysis.

PubMed

Ogawa, Hiroyuki; Nasu, Senshi; Takeshige, Motomu; Funabashi, Hisakage; Saito, Mikako; Matsuoka, Hideaki

2012-12-01

Microbial colonies in food matrices could be counted accurately by a novel noise-free method based on time-lapse shadow image analysis. An agar plate containing many clusters of microbial colonies and/or meat fragments was trans-illuminated to project their 2-dimensional (2D) shadow images on a color CCD camera. The 2D shadow images of every cluster distributed within a 3-mm thick agar layer were captured in focus simultaneously by means of a multiple focusing system, and were then converted to 3-dimensional (3D) shadow images. By time-lapse analysis of the 3D shadow images, it was determined whether each cluster comprised single or multiple colonies or a meat fragment. The analytical precision was high enough to be able to distinguish a microbial colony from a meat fragment, to recognize an oval image as two colonies contacting each other, and to detect microbial colonies hidden under a food fragment. The detection of hidden colonies is its outstanding performance in comparison with other systems. The present system attained accuracy for counting fewer than 5 colonies and is therefore of practical importance. Copyright © 2012 Elsevier B.V. All rights reserved.

Comparing AIRS/AMSU-A Satellite and MERRA/MERRA-2 Reanalysis products with In-situ Station Observations at Summit, Greenland

NASA Astrophysics Data System (ADS)

Hearty, T. J., III; Vollmer, B.; Wei, J. C.; Huwe, P. M.; Albayrak, A.; Wu, D. L.; Cullather, R. I.; Meyer, D. L.; Lee, J. N.; Blaisdell, J. M.; Susskind, J.; Nowicki, S.

2017-12-01

The surface air and skin temperatures reported by the Atmospheric Infrared Sounder (AIRS), the Modern-Era Retrospective analysis for Research and Applications (MERRA), and MERRA-2 at Summit, Greenland are compared with near surface air temperatures measured at National Oceanic and Atmospheric Administration (NOAA) and Greenland Climate Network (GC-Net) weather stations. Therefore this investigation requires familiarity with a heterogeneous set of swath, grid, and point data in several different formats, different granularity, and different sampling. We discuss the current subsetting capabilities available at the GES DISC (Goddard Earth Sciences Data Information Services Center) to perform the inter-comparisons necessary to evaluate the quality and trustworthiness of these datasets. We also explore potential future services which may assist users with this type of intercomparison. We find the AIRS Surface Skin Temperature (TS) is best correlated with the NOAA 2 m air temperature (T2M) but it tends to be colder than the station measurements. The difference may be the result of the frequent near surface temperature inversions in the region. The AIRS Surface Air Temperature (SAT) is also well correlated with the NOAA T2M but it has a warm bias with respect to the NOAA T2M during the cold season and a larger standard error than surface temperature. This suggests that the extrapolation of the temperature profile to the surface is not valid for the strongest inversions. Comparing the temperature lapse rate derived from the 2 stations shows that the lapse rate can increase closer to the surface. We also find that the difference between the AIRS SAT and TS is sensitive to near surface inversions. The MERRA-2 surface and near surface temperatures show improvements over MERRA but little sensitivity to near surface temperature inversions.

TLM-Quant: An Open-Source Pipeline for Visualization and Quantification of Gene Expression Heterogeneity in Growing Microbial Cells

PubMed Central

Piersma, Sjouke; Denham, Emma L.; Drulhe, Samuel; Tonk, Rudi H. J.; Schwikowski, Benno; van Dijl, Jan Maarten

2013-01-01

Gene expression heterogeneity is a key driver for microbial adaptation to fluctuating environmental conditions, cell differentiation and the evolution of species. This phenomenon has therefore enormous implications, not only for life in general, but also for biotechnological applications where unwanted subpopulations of non-producing cells can emerge in large-scale fermentations. Only time-lapse fluorescence microscopy allows real-time measurements of gene expression heterogeneity. A major limitation in the analysis of time-lapse microscopy data is the lack of fast, cost-effective, open, simple and adaptable protocols. Here we describe TLM-Quant, a semi-automatic pipeline for the analysis of time-lapse fluorescence microscopy data that enables the user to visualize and quantify gene expression heterogeneity. Importantly, our pipeline builds on the open-source packages ImageJ and R. To validate TLM-Quant, we selected three possible scenarios, namely homogeneous expression, highly ‘noisy’ heterogeneous expression, and bistable heterogeneous expression in the Gram-positive bacterium Bacillus subtilis. This bacterium is both a paradigm for systems-level studies on gene expression and a highly appreciated biotechnological ‘cell factory’. We conclude that the temporal resolution of such analyses with TLM-Quant is only limited by the numbers of recorded images. PMID:23874729

MitoGen: A Framework for Generating 3D Synthetic Time-Lapse Sequences of Cell Populations in Fluorescence Microscopy.

PubMed

Svoboda, David; Ulman, Vladimir

2017-01-01

The proper analysis of biological microscopy images is an important and complex task. Therefore, it requires verification of all steps involved in the process, including image segmentation and tracking algorithms. It is generally better to verify algorithms with computer-generated ground truth datasets, which, compared to manually annotated data, nowadays have reached high quality and can be produced in large quantities even for 3D time-lapse image sequences. Here, we propose a novel framework, called MitoGen, which is capable of generating ground truth datasets with fully 3D time-lapse sequences of synthetic fluorescence-stained cell populations. MitoGen shows biologically justified cell motility, shape and texture changes as well as cell divisions. Standard fluorescence microscopy phenomena such as photobleaching, blur with real point spread function (PSF), and several types of noise, are simulated to obtain realistic images. The MitoGen framework is scalable in both space and time. MitoGen generates visually plausible data that shows good agreement with real data in terms of image descriptors and mean square displacement (MSD) trajectory analysis. Additionally, it is also shown in this paper that four publicly available segmentation and tracking algorithms exhibit similar performance on both real and MitoGen-generated data. The implementation of MitoGen is freely available.

Individual and combined effects of multiple high-risk triggers on postcessation smoking urge and lapse.

PubMed

Lam, Cho Y; Businelle, Michael S; Aigner, Carrie J; McClure, Jennifer B; Cofta-Woerpel, Ludmila; Cinciripini, Paul M; Wetter, David W

2014-05-01

Negative affect, alcohol consumption, and presence of others smoking have consistently been implicated as risk factors for smoking lapse and relapse. What is not known, however, is how these factors work together to affect smoking outcomes. This paper uses ecological momentary assessment (EMA) collected during the first 7 days of a smoking cessation attempt to test the individual and combined effects of high-risk triggers on smoking urge and lapse. Participants were 300 female smokers who enrolled in a study that tested an individually tailored smoking cessation treatment. Participants completed EMA, which recorded negative affect, alcohol consumption, presence of others smoking, smoking urge, and smoking lapse, for 7 days starting on their quit date. Alcohol consumption, presence of others smoking, and negative affect were, independently and in combination, associated with increase in smoking urge and lapse. The results also found that the relationship between presence of others smoking and lapse and the relationship between negative affect and lapse were moderated by smoking urge. The current study found significant individual effects of alcohol consumption, presence of other smoking, and negative affect on smoking urge and lapse. Combing the triggers increased smoking urge and the risk for lapse to varying degrees, and the presence of all 3 triggers resulted in the highest urge and lapse risk.

RhoA regulates actin network dynamics during apical surface emergence in multiciliated epithelial cells

PubMed Central

Sedzinski, Jakub; Hannezo, Edouard; Tu, Fan; Biro, Maté

2017-01-01

ABSTRACT Homeostatic replacement of epithelial cells from basal precursors is a multistep process involving progenitor cell specification, radial intercalation and, finally, apical surface emergence. Recent data demonstrate that actin-based pushing under the control of the formin protein Fmn1 drives apical emergence in nascent multiciliated epithelial cells (MCCs), but little else is known about this actin network or the control of Fmn1. Here, we explore the role of the small GTPase RhoA in MCC apical emergence. Disruption of RhoA function reduced the rate of apical surface expansion and decreased the final size of the apical domain. Analysis of cell shapes suggests that RhoA alters the balance of forces exerted on the MCC apical surface. Finally, quantitative time-lapse imaging and fluorescence recovery after photobleaching studies argue that RhoA works in concert with Fmn1 to control assembly of the specialized apical actin network in MCCs. These data provide new molecular insights into epithelial apical surface assembly and could also shed light on mechanisms of apical lumen formation. PMID:28089989

RhoA regulates actin network dynamics during apical surface emergence in multiciliated epithelial cells.

PubMed

Sedzinski, Jakub; Hannezo, Edouard; Tu, Fan; Biro, Maté; Wallingford, John B

2017-01-15

Homeostatic replacement of epithelial cells from basal precursors is a multistep process involving progenitor cell specification, radial intercalation and, finally, apical surface emergence. Recent data demonstrate that actin-based pushing under the control of the formin protein Fmn1 drives apical emergence in nascent multiciliated epithelial cells (MCCs), but little else is known about this actin network or the control of Fmn1. Here, we explore the role of the small GTPase RhoA in MCC apical emergence. Disruption of RhoA function reduced the rate of apical surface expansion and decreased the final size of the apical domain. Analysis of cell shapes suggests that RhoA alters the balance of forces exerted on the MCC apical surface. Finally, quantitative time-lapse imaging and fluorescence recovery after photobleaching studies argue that RhoA works in concert with Fmn1 to control assembly of the specialized apical actin network in MCCs. These data provide new molecular insights into epithelial apical surface assembly and could also shed light on mechanisms of apical lumen formation. © 2017. Published by The Company of Biologists Ltd.

Airway epithelial wounds in rhesus monkey generate ionic currents that guide cell migration to promote healing

PubMed Central

Sun, Yao-Hui; Reid, Brian; Fontaine, Justin H.; Miller, Lisa A.; Hyde, Dallas M.; Mogilner, Alex

2011-01-01

Damage to the respiratory epithelium is one of the most critical steps to many life-threatening diseases, such as acute respiratory distress syndrome and chronic obstructive pulmonary disease. The mechanisms underlying repair of the damaged epithelium have not yet been fully elucidated. Here we provide experimental evidence suggesting a novel mechanism for wound repair: endogenous electric currents. It is known that the airway epithelium maintains a voltage difference referred to as the transepithelial potential. Using a noninvasive vibrating probe, we demonstrate that wounds in the epithelium of trachea from rhesus monkeys generate significant outward electric currents. A small slit wound produced an outward current (1.59 μA/cm2), which could be enhanced (nearly doubled) by the ion transport stimulator aminophylline. In addition, inhibiting cystic fibrosis transmembrane conductance regulator (CFTR) with CFTR(Inh)-172 significantly reduced wound currents (0.17 μA/cm2), implicating an important role of ion transporters in wound induced electric potentials. Time-lapse video microscopy showed that applied electric fields (EFs) induced robust directional migration of primary tracheobronchial epithelial cells from rhesus monkeys, towards the cathode, with a threshold of <23 mV/mm. Reversal of the field polarity induced cell migration towards the new cathode. We further demonstrate that application of an EF promoted wound healing in a monolayer wound healing assay. Our results suggest that endogenous electric currents at sites of tracheal epithelial injury may direct cell migration, which could benefit restitution of damaged airway mucosa. Manipulation of ion transport may lead to novel therapeutic approaches to repair damaged respiratory epithelium. PMID:21719726

About the coordinate time for photons in Lifshitz space-times

NASA Astrophysics Data System (ADS)

Villanueva, J. R.; Vásquez, Yerko

2013-10-01

In this paper we studied the behavior of radial photons from the point of view of the coordinate time in (asymptotically) Lifshitz space-times, and we found a generalization to the result reported in previous works by Cruz et al. (Eur. Phys. J. C 73:7, 2013), Olivares et al. (Astrophys. Space Sci. 347:83-89, 2013), and Olivares et al. (arXiv:1306.5285). We demonstrate that all asymptotically Lifshitz space-times characterized by a lapse function f( r) which tends to one when r→∞, present the same behavior, in the sense that an external observer will see that photons arrive at spatial infinity in a finite coordinate time. Also, we show that radial photons in the proper system cannot determine the presence of the black hole in the region r +< r<∞, because the proper time as a result is independent of the lapse function f( r).

Early Lapses in a Cessation Attempt: Lapse Contexts, Cessation Success, and Predictors of Early Lapse

PubMed Central

2013-01-01

Introduction: The great majority of smokers relapse when they make quit attempts. Therefore, understanding the process of relapse may guide the development of more effective smoking cessation or relapse prevention treatments. The goal of this research is to extend our understanding of the context of initial lapses that occur within 8 weeks of quitting by using more comprehensive assessments of context, a contemporary sample, and sophisticated analytic techniques. Methods: Participants from a randomized controlled smoking cessation trial completed baseline assessments of demographics and tobacco dependence, a daily smoking calendar to determine latency to lapse and relapse (7 consecutive days of smoking), and an assessment of initial lapse context (affect, location, activity, interpersonal, smoke exposure, and cigarette availability). Latent class analysis (LCA) was used to analyze the 6 early lapse (within the first 8 weeks; N = 551) context dimensions; logistic regression and Cox regression were used to relate context to cessation outcomes. Results: LCA revealed 5 distinct initial lapse context classes (talking, with friends, angry; social; alone; with spouse, angry; and with smoking spouse) that were differentially related to cessation outcome. The easy availability of cigarettes characterized almost 75% of lapses, but being with friends, drinking, and not being at home were associated with a lower likelihood of progression to relapse. Conclusions: Early lapsing is highly related to ultimate relapse, and lapsing in frequently experienced contexts seemed most strongly linked with progression to full relapse. PMID:23780705

Time-lapse cinematography of the capillary tube cell migration inhibition test.

PubMed

Bray, M A

1980-01-01

The kinetics of human and guinea pig cell migration inhibition have been studied using time-lapse cinematography of cells migrating from capillary tubes. Guinea pig and human cells exhibit markedly different kinetics in the absence of inhibitors. Specific antigen causes a dose-related inhibition of migration for up to 60 h using guinea pig cells and a peak of inhibition after 18 h using the human leucocyte system. The timing of measurement of maximum activity more critical for the latter test. The kinetics of lymphokine generation have been examined and the migration inhibitory activity of the plant mitogen (PHA), a Kurloff cell product and a continuous cell line supernatant have been compared with the inhibitory profiles of lymphokine preparations and specific antigen.

Monitoring CO2 Intrusion in shallow aquifer using complex electrical methods and a novel CO2 sensitive Lidar-based sensor

NASA Astrophysics Data System (ADS)

Leger, E.; Dafflon, B.; Thorpe, M.; Kreitinger, A.; Laura, D.; Haivala, J.; Peterson, J.; Spangler, L.; Hubbard, S. S.

2016-12-01

While subsurface storage of CO2 in geological formations offers significant potential to mitigate atmospheric greenhouse gasses, approaches are needed to monitor the efficacy of the strategy as well as possible negative consequences, such as leakage of CO2 or brine into groundwater or release of fugitive gaseous CO2. Groundwater leakages can cause subsequent reactions that may also be deleterious. For example, a release of dissolved CO2 into shallow groundwatersystems can decrease groundwater pH which can potentiallymobilize naturally occurring trace metals and ions. In this perspective, detecting and assessing potential leak requires development of novel monitoring techniques.We present the results of using surface electrical resistivity tomography (ERT) and a novel CO2 sensitive Lidar-based sensor to monitor a controlled CO2 release at the ZeroEmission Research and Technology Center (Bozeman, Montana). Soil temperature and moisture sensors, wellbore water quality measurements as well as chamber-based CO2 flux measurements were used in addition to the ERT and a novel Lidar-based sensor to detect and assess potential leakage into groundwater, vadose zone and atmosphere. The three-week release wascarried out in the vadose and the saturated zones. Well sampling of pH and conductivity and surface CO2 fluxes and concentrations measurements were acquired during the release and are compared with complex electricalresistivity time-lapse measurements. The novel Lidar-based image of the CO2 plume were compared to chamber-based CO2 flux and concentration measurements. While a continuous increase in subsurface ERT and above ground CO2 was documented, joint analysis of the above and below ground data revealed distinct transport behavior in the vadose and saturated zones. Two type of transport were observed, one in the vadoze zone, monitored by CO2 flux chamber and ERT, and the other one in the saturated zone, were ERT and wellsampling were carried. The experiment suggests how a range of geophysical, remote sensing, hydrological and geochemical measurement approaches can be optimally configured to detect the distribution and explore behavior of possible CO2 leakages in distinct compartments, including groundwater, vadose zone, and atmosphere.

Does Iris Change Over Time?

PubMed Central

Mehrotra, Hunny; Vatsa, Mayank; Singh, Richa; Majhi, Banshidhar

2013-01-01

Iris as a biometric identifier is assumed to be stable over a period of time. However, some researchers have observed that for long time lapse, the genuine match score distribution shifts towards the impostor score distribution and the performance of iris recognition reduces. The main purpose of this study is to determine if the shift in genuine scores can be attributed to aging or not. The experiments are performed on the two publicly available iris aging databases namely, ND-Iris-Template-Aging-2008–2010 and ND-TimeLapseIris-2012 using a commercial matcher, VeriEye. While existing results are correct about increase in false rejection over time, we observe that it is primarily due to the presence of other covariates such as blur, noise, occlusion, and pupil dilation. This claim is substantiated with quality score comparison of the gallery and probe pairs. PMID:24244305

Does iris change over time?

PubMed

Mehrotra, Hunny; Vatsa, Mayank; Singh, Richa; Majhi, Banshidhar

2013-01-01

Iris as a biometric identifier is assumed to be stable over a period of time. However, some researchers have observed that for long time lapse, the genuine match score distribution shifts towards the impostor score distribution and the performance of iris recognition reduces. The main purpose of this study is to determine if the shift in genuine scores can be attributed to aging or not. The experiments are performed on the two publicly available iris aging databases namely, ND-Iris-Template-Aging-2008-2010 and ND-TimeLapseIris-2012 using a commercial matcher, VeriEye. While existing results are correct about increase in false rejection over time, we observe that it is primarily due to the presence of other covariates such as blur, noise, occlusion, and pupil dilation. This claim is substantiated with quality score comparison of the gallery and probe pairs.

Constraining Unsaturated Hydraulic Parameters Using the Latin Hypercube Sampling Method and Coupled Hydrogeophysical Approach

NASA Astrophysics Data System (ADS)

Farzamian, Mohammad; Monteiro Santos, Fernando A.; Khalil, Mohamed A.

2017-12-01

The coupled hydrogeophysical approach has proved to be a valuable tool for improving the use of geoelectrical data for hydrological model parameterization. In the coupled approach, hydrological parameters are directly inferred from geoelectrical measurements in a forward manner to eliminate the uncertainty connected to the independent inversion of electrical resistivity data. Several numerical studies have been conducted to demonstrate the advantages of a coupled approach; however, only a few attempts have been made to apply the coupled approach to actual field data. In this study, we developed a 1D coupled hydrogeophysical code to estimate the van Genuchten-Mualem model parameters, K s, n, θ r and α, from time-lapse vertical electrical sounding data collected during a constant inflow infiltration experiment. van Genuchten-Mualem parameters were sampled using the Latin hypercube sampling method to provide a full coverage of the range of each parameter from their distributions. By applying the coupled approach, vertical electrical sounding data were coupled to hydrological models inferred from van Genuchten-Mualem parameter samples to investigate the feasibility of constraining the hydrological model. The key approaches taken in the study are to (1) integrate electrical resistivity and hydrological data and avoiding data inversion, (2) estimate the total water mass recovery of electrical resistivity data and consider it in van Genuchten-Mualem parameters evaluation and (3) correct the influence of subsurface temperature fluctuations during the infiltration experiment on electrical resistivity data. The results of the study revealed that the coupled hydrogeophysical approach can improve the value of geophysical measurements in hydrological model parameterization. However, the approach cannot overcome the technical limitations of the geoelectrical method associated with resolution and of water mass recovery.

Influence of Sea Surface Temperature, Tropospheric Humidity and Lapse Rate on the Annual Cycle of the Clear-Sky Greenhouse Effect

NASA Technical Reports Server (NTRS)

Hu, H.; Liu, W.

2000-01-01

The implication of this work will provide modeling study a surrogate of annual cycle of the greenhouse effect. For example, the model should be able to simulate the annual cycle before it can be used for global change study.

Cross-sectional and Longitudinal Analyses of Everyday Memory Lapses in Older Adults

PubMed Central

McAlister, Courtney; Schmitter-Edgecombe, Maureen

2016-01-01

Everyday memory lapses experienced by older adults (OA) were examined using a daily-diary checklist and retrospective questionnaire. In Experiment 1, 138 younger and 138 OAs indicated the frequency of forgetting of 16 memory lapses, and whether each occurred daily during the course of a week. OAs reported more memory lapses on the questionnaire, but not the daily diary. OAs reported more frequently forgetting names and words, while younger adults had more difficulty with appointments and personal dates. Fewer memory lapses on the daily diary were related to better performance on a laboratory-memory measure for OAs. In Experiment 2, 62 OAs returned for a five-year follow-up and endorsed experiencing more memory lapses on the daily diary compared to baseline, specifically forgetting more names and words, but not the retrospective questionnaire. Daily checklist memory lapses again correlated with the laboratory-memory measure. A daily checklist may be a viable way to assess everyday memory lapses. PMID:26810777

A new protocol for functional analysis of adipogenesis using reverse transfection technology and time-lapse video microscopy.

PubMed

Grönniger, Elke; Wessel, Sonja; Kühn, Sonja Christin; Söhle, Jörn; Wenck, Horst; Stäb, Franz; Winnefeld, Marc

2010-07-01

Since the worldwide increase in obesity represents a growing challenge for healthcare systems, research focusing on fat cell metabolism has become a focal point of interest. Here, we describe a small interfering RNA (siRNA)-technology-based screening method to study fat cell differentiation in human primary preadipocytes that could be further developed towards an automated middle-throughput screening procedure. First, we established optimal conditions for the reverse transfection of human primary preadipocytes demonstrating that an efficient reverse transfection of preadipocytes is technically feasible. Aligning the processes of reverse transfection and fat cell differentiation utilizing peroxisome proliferator-activated receptor gamma (PPAR gamma)-siRNA, we showed that preadipocyte differentiation was suppressed by knock-down of PPAR gamma, the key regulator of fat cell differentiation. The use of fluorescently labelled fatty acids in combination with fluorescence time-lapse microscopy over a longer period of time enabled us to quantify the PPAR gamma phenotype. Additionally, our data demonstrate that reverse transfection of human cultured preadipocytes with TIP60 (HIV-1 Tat-interacting protein 60)-siRNA lead to a TIP60 knock-down and subsequently inhibits fat cell differentiation, suggesting a role of this protein in human adipogenesis. In conclusion, we established a protocol that allows for an efficient functional and time-dependent analysis by quantitative time-lapse microscopy to identify novel adipogenesis-associated genes.

Real-Time Digital Bright Field Technology for Rapid Antibiotic Susceptibility Testing.

PubMed

Canali, Chiara; Spillum, Erik; Valvik, Martin; Agersnap, Niels; Olesen, Tom

2018-01-01

Optical scanning through bacterial samples and image-based analysis may provide a robust method for bacterial identification, fast estimation of growth rates and their modulation due to the presence of antimicrobial agents. Here, we describe an automated digital, time-lapse, bright field imaging system (oCelloScope, BioSense Solutions ApS, Farum, Denmark) for rapid and higher throughput antibiotic susceptibility testing (AST) of up to 96 bacteria-antibiotic combinations at a time. The imaging system consists of a digital camera, an illumination unit and a lens where the optical axis is tilted 6.25° relative to the horizontal plane of the stage. Such tilting grants more freedom of operation at both high and low concentrations of microorganisms. When considering a bacterial suspension in a microwell, the oCelloScope acquires a sequence of 6.25°-tilted images to form an image Z-stack. The stack contains the best-focus image, as well as the adjacent out-of-focus images (which contain progressively more out-of-focus bacteria, the further the distance from the best-focus position). The acquisition process is repeated over time, so that the time-lapse sequence of best-focus images is used to generate a video. The setting of the experiment, image analysis and generation of time-lapse videos can be performed through a dedicated software (UniExplorer, BioSense Solutions ApS). The acquired images can be processed for online and offline quantification of several morphological parameters, microbial growth, and inhibition over time.