Sample records for systematic error due

  1. Propagation of stage measurement uncertainties to streamflow time series

    NASA Astrophysics Data System (ADS)

    Horner, Ivan; Le Coz, Jérôme; Renard, Benjamin; Branger, Flora; McMillan, Hilary

    2016-04-01

    Streamflow uncertainties due to stage measurements errors are generally overlooked in the promising probabilistic approaches that have emerged in the last decade. We introduce an original error model for propagating stage uncertainties through a stage-discharge rating curve within a Bayesian probabilistic framework. The method takes into account both rating curve (parametric errors and structural errors) and stage uncertainty (systematic and non-systematic errors). Practical ways to estimate the different types of stage errors are also presented: (1) non-systematic errors due to instrument resolution and precision and non-stationary waves and (2) systematic errors due to gauge calibration against the staff gauge. The method is illustrated at a site where the rating-curve-derived streamflow can be compared with an accurate streamflow reference. The agreement between the two time series is overall satisfying. Moreover, the quantification of uncertainty is also satisfying since the streamflow reference is compatible with the streamflow uncertainty intervals derived from the rating curve and the stage uncertainties. Illustrations from other sites are also presented. Results are much contrasted depending on the site features. In some cases, streamflow uncertainty is mainly due to stage measurement errors. The results also show the importance of discriminating systematic and non-systematic stage errors, especially for long term flow averages. Perspectives for improving and validating the streamflow uncertainty estimates are eventually discussed.

  2. Global Warming Estimation from MSU

    NASA Technical Reports Server (NTRS)

    Prabhakara, C.; Iacovazzi, Robert; Yoo, Jung-Moon

    1998-01-01

    Microwave Sounding Unit (MSU) radiometer observations in Ch 2 (53.74 GHz) from sequential, sun-synchronous, polar-orbiting NOAA satellites contain small systematic errors. Some of these errors are time-dependent and some are time-independent. Small errors in Ch 2 data of successive satellites arise from calibration differences. Also, successive NOAA satellites tend to have different Local Equatorial Crossing Times (LECT), which introduce differences in Ch 2 data due to the diurnal cycle. These two sources of systematic error are largely time independent. However, because of atmospheric drag, there can be a drift in the LECT of a given satellite, which introduces time-dependent systematic errors. One of these errors is due to the progressive chance in the diurnal cycle and the other is due to associated chances in instrument heating by the sun. In order to infer global temperature trend from the these MSU data, we have eliminated explicitly the time-independent systematic errors. Both of the time-dependent errors cannot be assessed from each satellite. For this reason, their cumulative effect on the global temperature trend is evaluated implicitly. Christy et al. (1998) (CSL). based on their method of analysis of the MSU Ch 2 data, infer a global temperature cooling trend (-0.046 K per decade) from 1979 to 1997, although their near nadir measurements yield near zero trend (0.003 K/decade). Utilising an independent method of analysis, we infer global temperature warmed by 0.12 +/- 0.06 C per decade from the observations of the MSU Ch 2 during the period 1980 to 1997.

  3. Systematic error of diode thermometer.

    PubMed

    Iskrenovic, Predrag S

    2009-08-01

    Semiconductor diodes are often used for measuring temperatures. The forward voltage across a diode decreases, approximately linearly, with the increase in temperature. The applied method is mainly the simplest one. A constant direct current flows through the diode, and voltage is measured at diode terminals. The direct current that flows through the diode, putting it into operating mode, heats up the diode. The increase in temperature of the diode-sensor, i.e., the systematic error due to self-heating, depends on the intensity of current predominantly and also on other factors. The results of systematic error measurements due to heating up by the forward-bias current have been presented in this paper. The measurements were made at several diodes over a wide range of bias current intensity.

  4. Sources of variability and systematic error in mouse timing behavior.

    PubMed

    Gallistel, C R; King, Adam; McDonald, Robert

    2004-01-01

    In the peak procedure, starts and stops in responding bracket the target time at which food is expected. The variability in start and stop times is proportional to the target time (scalar variability), as is the systematic error in the mean center (scalar error). The authors investigated the source of the error and the variability, using head poking in the mouse, with target intervals of 5 s, 15 s, and 45 s, in the standard procedure, and in a variant with 3 different target intervals at 3 different locations in a single trial. The authors conclude that the systematic error is due to the asymmetric location of start and stop decision criteria, and the scalar variability derives primarily from sources other than memory.

  5. Error analysis and system optimization of non-null aspheric testing system

    NASA Astrophysics Data System (ADS)

    Luo, Yongjie; Yang, Yongying; Liu, Dong; Tian, Chao; Zhuo, Yongmo

    2010-10-01

    A non-null aspheric testing system, which employs partial null lens (PNL for short) and reverse iterative optimization reconstruction (ROR for short) technique, is proposed in this paper. Based on system modeling in ray tracing software, the parameter of each optical element is optimized and this makes system modeling more precise. Systematic error of non-null aspheric testing system is analyzed and can be categorized into two types, the error due to surface parameters of PNL in the system modeling and the rest from non-null interferometer by the approach of error storage subtraction. Experimental results show that, after systematic error is removed from testing result of non-null aspheric testing system, the aspheric surface is precisely reconstructed by ROR technique and the consideration of systematic error greatly increase the test accuracy of non-null aspheric testing system.

  6. Detecting and overcoming systematic errors in genome-scale phylogenies.

    PubMed

    Rodríguez-Ezpeleta, Naiara; Brinkmann, Henner; Roure, Béatrice; Lartillot, Nicolas; Lang, B Franz; Philippe, Hervé

    2007-06-01

    Genome-scale data sets result in an enhanced resolution of the phylogenetic inference by reducing stochastic errors. However, there is also an increase of systematic errors due to model violations, which can lead to erroneous phylogenies. Here, we explore the impact of systematic errors on the resolution of the eukaryotic phylogeny using a data set of 143 nuclear-encoded proteins from 37 species. The initial observation was that, despite the impressive amount of data, some branches had no significant statistical support. To demonstrate that this lack of resolution is due to a mutual annihilation of phylogenetic and nonphylogenetic signals, we created a series of data sets with slightly different taxon sampling. As expected, these data sets yielded strongly supported but mutually exclusive trees, thus confirming the presence of conflicting phylogenetic and nonphylogenetic signals in the original data set. To decide on the correct tree, we applied several methods expected to reduce the impact of some kinds of systematic error. Briefly, we show that (i) removing fast-evolving positions, (ii) recoding amino acids into functional categories, and (iii) using a site-heterogeneous mixture model (CAT) are three effective means of increasing the ratio of phylogenetic to nonphylogenetic signal. Finally, our results allow us to formulate guidelines for detecting and overcoming phylogenetic artefacts in genome-scale phylogenetic analyses.

  7. ELLIPTICAL WEIGHTED HOLICs FOR WEAK LENSING SHEAR MEASUREMENT. III. THE EFFECT OF RANDOM COUNT NOISE ON IMAGE MOMENTS IN WEAK LENSING ANALYSIS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Okura, Yuki; Futamase, Toshifumi, E-mail: yuki.okura@nao.ac.jp, E-mail: tof@astr.tohoku.ac.jp

    This is the third paper on the improvement of systematic errors in weak lensing analysis using an elliptical weight function, referred to as E-HOLICs. In previous papers, we succeeded in avoiding errors that depend on the ellipticity of the background image. In this paper, we investigate the systematic error that depends on the signal-to-noise ratio of the background image. We find that the origin of this error is the random count noise that comes from the Poisson noise of sky counts. The random count noise makes additional moments and centroid shift error, and those first-order effects are canceled in averaging,more » but the second-order effects are not canceled. We derive the formulae that correct this systematic error due to the random count noise in measuring the moments and ellipticity of the background image. The correction formulae obtained are expressed as combinations of complex moments of the image, and thus can correct the systematic errors caused by each object. We test their validity using a simulated image and find that the systematic error becomes less than 1% in the measured ellipticity for objects with an IMCAT significance threshold of {nu} {approx} 11.7.« less

  8. Effects of vertical distribution of water vapor and temperature on total column water vapor retrieval error

    NASA Technical Reports Server (NTRS)

    Sun, Jielun

    1993-01-01

    Results are presented of a test of the physically based total column water vapor retrieval algorithm of Wentz (1992) for sensitivity to realistic vertical distributions of temperature and water vapor. The ECMWF monthly averaged temperature and humidity fields are used to simulate the spatial pattern of systematic retrieval error of total column water vapor due to this sensitivity. The estimated systematic error is within 0.1 g/sq cm over about 70 percent of the global ocean area; systematic errors greater than 0.3 g/sq cm are expected to exist only over a few well-defined regions, about 3 percent of the global oceans, assuming that the global mean value is unbiased.

  9. [Errors in Peruvian medical journals references].

    PubMed

    Huamaní, Charles; Pacheco-Romero, José

    2009-01-01

    References are fundamental in our studies; an adequate selection is asimportant as an adequate description. To determine the number of errors in a sample of references found in Peruvian medical journals. We reviewed 515 scientific papers references selected by systematic randomized sampling and corroborated reference information with the original document or its citation in Pubmed, LILACS or SciELO-Peru. We found errors in 47,6% (245) of the references, identifying 372 types of errors; the most frequent were errors in presentation style (120), authorship (100) and title (100), mainly due to spelling mistakes (91). References error percentage was high, varied and multiple. We suggest systematic revision of references in the editorial process as well as to extend the discussion on this theme. references, periodicals, research, bibliometrics.

  10. Component Analysis of Errors on PERSIANN Precipitation Estimates over Urmia Lake Basin, IRAN

    NASA Astrophysics Data System (ADS)

    Ghajarnia, N.; Daneshkar Arasteh, P.; Liaghat, A. M.; Araghinejad, S.

    2016-12-01

    In this study, PERSIANN daily dataset is evaluated from 2000 to 2011 in 69 pixels over Urmia Lake basin in northwest of Iran. Different analytical approaches and indexes are used to examine PERSIANN precision in detection and estimation of rainfall rate. The residuals are decomposed into Hit, Miss and FA estimation biases while continues decomposition of systematic and random error components are also analyzed seasonally and categorically. New interpretation of estimation accuracy named "reliability on PERSIANN estimations" is introduced while the changing manners of existing categorical/statistical measures and error components are also seasonally analyzed over different rainfall rate categories. This study yields new insights into the nature of PERSIANN errors over Urmia lake basin as a semi-arid region in the middle-east, including the followings: - The analyzed contingency table indexes indicate better detection precision during spring and fall. - A relatively constant level of error is generally observed among different categories. The range of precipitation estimates at different rainfall rate categories is nearly invariant as a sign for the existence of systematic error. - Low level of reliability is observed on PERSIANN estimations at different categories which are mostly associated with high level of FA error. However, it is observed that as the rate of precipitation increase, the ability and precision of PERSIANN in rainfall detection also increases. - The systematic and random error decomposition in this area shows that PERSIANN has more difficulty in modeling the system and pattern of rainfall rather than to have bias due to rainfall uncertainties. The level of systematic error also considerably increases in heavier rainfalls. It is also important to note that PERSIANN error characteristics at each season varies due to the condition and rainfall patterns of that season which shows the necessity of seasonally different approach for the calibration of this product. Overall, we believe that different error component's analysis performed in this study, can substantially help any further local studies for post-calibration and bias reduction of PERSIANN estimations.

  11. Correcting systematic errors in high-sensitivity deuteron polarization measurements

    NASA Astrophysics Data System (ADS)

    Brantjes, N. P. M.; Dzordzhadze, V.; Gebel, R.; Gonnella, F.; Gray, F. E.; van der Hoek, D. J.; Imig, A.; Kruithof, W. L.; Lazarus, D. M.; Lehrach, A.; Lorentz, B.; Messi, R.; Moricciani, D.; Morse, W. M.; Noid, G. A.; Onderwater, C. J. G.; Özben, C. S.; Prasuhn, D.; Levi Sandri, P.; Semertzidis, Y. K.; da Silva e Silva, M.; Stephenson, E. J.; Stockhorst, H.; Venanzoni, G.; Versolato, O. O.

    2012-02-01

    This paper reports deuteron vector and tensor beam polarization measurements taken to investigate the systematic variations due to geometric beam misalignments and high data rates. The experiments used the In-Beam Polarimeter at the KVI-Groningen and the EDDA detector at the Cooler Synchrotron COSY at Jülich. By measuring with very high statistical precision, the contributions that are second-order in the systematic errors become apparent. By calibrating the sensitivity of the polarimeter to such errors, it becomes possible to obtain information from the raw count rate values on the size of the errors and to use this information to correct the polarization measurements. During the experiment, it was possible to demonstrate that corrections were satisfactory at the level of 10 -5 for deliberately large errors. This may facilitate the real time observation of vector polarization changes smaller than 10 -6 in a search for an electric dipole moment using a storage ring.

  12. Combined influence of CT random noise and HU-RSP calibration curve nonlinearities on proton range systematic errors

    NASA Astrophysics Data System (ADS)

    Brousmiche, S.; Souris, K.; Orban de Xivry, J.; Lee, J. A.; Macq, B.; Seco, J.

    2017-11-01

    Proton range random and systematic uncertainties are the major factors undermining the advantages of proton therapy, namely, a sharp dose falloff and a better dose conformality for lower doses in normal tissues. The influence of CT artifacts such as beam hardening or scatter can easily be understood and estimated due to their large-scale effects on the CT image, like cupping and streaks. In comparison, the effects of weakly-correlated stochastic noise are more insidious and less attention is drawn on them partly due to the common belief that they only contribute to proton range uncertainties and not to systematic errors thanks to some averaging effects. A new source of systematic errors on the range and relative stopping powers (RSP) has been highlighted and proved not to be negligible compared to the 3.5% uncertainty reference value used for safety margin design. Hence, we demonstrate that the angular points in the HU-to-RSP calibration curve are an intrinsic source of proton range systematic error for typical levels of zero-mean stochastic CT noise. Systematic errors on RSP of up to 1% have been computed for these levels. We also show that the range uncertainty does not generally vary linearly with the noise standard deviation. We define a noise-dependent effective calibration curve that better describes, for a given material, the RSP value that is actually used. The statistics of the RSP and the range continuous slowing down approximation (CSDA) have been analytically derived for the general case of a calibration curve obtained by the stoichiometric calibration procedure. These models have been validated against actual CSDA simulations for homogeneous and heterogeneous synthetical objects as well as on actual patient CTs for prostate and head-and-neck treatment planning situations.

  13. Mapping the absolute magnetic field and evaluating the quadratic Zeeman-effect-induced systematic error in an atom interferometer gravimeter

    NASA Astrophysics Data System (ADS)

    Hu, Qing-Qing; Freier, Christian; Leykauf, Bastian; Schkolnik, Vladimir; Yang, Jun; Krutzik, Markus; Peters, Achim

    2017-09-01

    Precisely evaluating the systematic error induced by the quadratic Zeeman effect is important for developing atom interferometer gravimeters aiming at an accuracy in the μ Gal regime (1 μ Gal =10-8m /s2 ≈10-9g ). This paper reports on the experimental investigation of Raman spectroscopy-based magnetic field measurements and the evaluation of the systematic error in the gravimetric atom interferometer (GAIN) due to quadratic Zeeman effect. We discuss Raman duration and frequency step-size-dependent magnetic field measurement uncertainty, present vector light shift and tensor light shift induced magnetic field measurement offset, and map the absolute magnetic field inside the interferometer chamber of GAIN with an uncertainty of 0.72 nT and a spatial resolution of 12.8 mm. We evaluate the quadratic Zeeman-effect-induced gravity measurement error in GAIN as 2.04 μ Gal . The methods shown in this paper are important for precisely mapping the absolute magnetic field in vacuum and reducing the quadratic Zeeman-effect-induced systematic error in Raman transition-based precision measurements, such as atomic interferometer gravimeters.

  14. A procedure for the significance testing of unmodeled errors in GNSS observations

    NASA Astrophysics Data System (ADS)

    Li, Bofeng; Zhang, Zhetao; Shen, Yunzhong; Yang, Ling

    2018-01-01

    It is a crucial task to establish a precise mathematical model for global navigation satellite system (GNSS) observations in precise positioning. Due to the spatiotemporal complexity of, and limited knowledge on, systematic errors in GNSS observations, some residual systematic errors would inevitably remain even after corrected with empirical model and parameterization. These residual systematic errors are referred to as unmodeled errors. However, most of the existing studies mainly focus on handling the systematic errors that can be properly modeled and then simply ignore the unmodeled errors that may actually exist. To further improve the accuracy and reliability of GNSS applications, such unmodeled errors must be handled especially when they are significant. Therefore, a very first question is how to statistically validate the significance of unmodeled errors. In this research, we will propose a procedure to examine the significance of these unmodeled errors by the combined use of the hypothesis tests. With this testing procedure, three components of unmodeled errors, i.e., the nonstationary signal, stationary signal and white noise, are identified. The procedure is tested by using simulated data and real BeiDou datasets with varying error sources. The results show that the unmodeled errors can be discriminated by our procedure with approximately 90% confidence. The efficiency of the proposed procedure is further reassured by applying the time-domain Allan variance analysis and frequency-domain fast Fourier transform. In summary, the spatiotemporally correlated unmodeled errors are commonly existent in GNSS observations and mainly governed by the residual atmospheric biases and multipath. Their patterns may also be impacted by the receiver.

  15. Edge profile analysis of Joint European Torus (JET) Thomson scattering data: Quantifying the systematic error due to edge localised mode synchronisation.

    PubMed

    Leyland, M J; Beurskens, M N A; Flanagan, J C; Frassinetti, L; Gibson, K J; Kempenaars, M; Maslov, M; Scannell, R

    2016-01-01

    The Joint European Torus (JET) high resolution Thomson scattering (HRTS) system measures radial electron temperature and density profiles. One of the key capabilities of this diagnostic is measuring the steep pressure gradient, termed the pedestal, at the edge of JET plasmas. The pedestal is susceptible to limiting instabilities, such as Edge Localised Modes (ELMs), characterised by a periodic collapse of the steep gradient region. A common method to extract the pedestal width, gradient, and height, used on numerous machines, is by performing a modified hyperbolic tangent (mtanh) fit to overlaid profiles selected from the same region of the ELM cycle. This process of overlaying profiles, termed ELM synchronisation, maximises the number of data points defining the pedestal region for a given phase of the ELM cycle. When fitting to HRTS profiles, it is necessary to incorporate the diagnostic radial instrument function, particularly important when considering the pedestal width. A deconvolved fit is determined by a forward convolution method requiring knowledge of only the instrument function and profiles. The systematic error due to the deconvolution technique incorporated into the JET pedestal fitting tool has been documented by Frassinetti et al. [Rev. Sci. Instrum. 83, 013506 (2012)]. This paper seeks to understand and quantify the systematic error introduced to the pedestal width due to ELM synchronisation. Synthetic profiles, generated with error bars and point-to-point variation characteristic of real HRTS profiles, are used to evaluate the deviation from the underlying pedestal width. We find on JET that the ELM synchronisation systematic error is negligible in comparison to the statistical error when assuming ten overlaid profiles (typical for a pre-ELM fit to HRTS profiles). This confirms that fitting a mtanh to ELM synchronised profiles is a robust and practical technique for extracting the pedestal structure.

  16. Procedures for dealing with certain types of noise and systematic errors common to many Hadamard transform optical systems

    NASA Technical Reports Server (NTRS)

    Harwit, M.

    1977-01-01

    Sources of noise and error correcting procedures characteristic of Hadamard transform optical systems were investigated. Reduction of spectral noise due to noise spikes in the data, the effect of random errors, the relative performance of Fourier and Hadamard transform spectrometers operated under identical detector-noise-limited conditions, and systematic means for dealing with mask defects are among the topics discussed. The distortion in Hadamard transform optical instruments caused by moving Masks, incorrect mask alignment, missing measurements, and diffraction is analyzed and techniques for reducing or eliminating this distortion are described.

  17. 13Check_RNA: A tool to evaluate 13C chemical shifts assignments of RNA.

    PubMed

    Icazatti, A A; Martin, O A; Villegas, M; Szleifer, I; Vila, J A

    2018-06-19

    Chemical shifts (CS) are an important source of structural information of macromolecules such as RNA. In addition to the scarce availability of CS for RNA, the observed values are prone to errors due to a wrong re-calibration or miss assignments. Different groups have dedicated their efforts to correct CS systematic errors on RNA. Despite this, there are not automated and freely available algorithms for correct assignments of RNA 13C CS before their deposition to the BMRB or re-reference already deposited CS with systematic errors. Based on an existent method we have implemented an open source python module to correct 13C CS (from here on 13Cexp) systematic errors of RNAs and then return the results in 3 formats including the nmrstar one. This software is available on GitHub at https://github.com/BIOS-IMASL/13Check_RNA under a MIT license. Supplementary data are available at Bioinformatics online.

  18. Systematic instruction for individuals with acquired brain injury: Results of a randomized controlled trial

    PubMed Central

    Powell, Laurie Ehlhardt; Glang, Ann; Ettel, Deborah; Todis, Bonnie; Sohlberg, McKay; Albin, Richard

    2012-01-01

    The goal of this study was to experimentally evaluate systematic instruction compared with trial-and-error learning (conventional instruction) applied to assistive technology for cognition (ATC), in a double blind, pretest-posttest, randomized controlled trial. Twenty-nine persons with moderate-severe cognitive impairments due to acquired brain injury (15 in systematic instruction group; 14 in conventional instruction) completed the study. Both groups received 12, 45-minute individual training sessions targeting selected skills on the Palm Tungsten E2 personal digital assistant (PDA). A criterion-based assessment of PDA skills was used to evaluate accuracy, fluency/efficiency, maintenance, and generalization of skills. There were no significant differences between groups at immediate posttest with regard to accuracy and fluency. However, significant differences emerged at 30-day follow-up in favor of systematic instruction. Furthermore, systematic instruction participants performed significantly better at immediate posttest generalizing trained PDA skills when interacting with people other than the instructor. These results demonstrate that systematic instruction applied to ATC results in better skill maintenance and generalization than trial-and-error learning for individuals with moderate-severe cognitive impairments due to acquired brain injury. Implications, study limitations, and directions for future research are discussed. PMID:22264146

  19. Error sources in passive and active microwave satellite soil moisture over Australia

    USDA-ARS?s Scientific Manuscript database

    Development of a long-term climate record of soil moisture (SM) involves combining historic and present satellite-retrieved SM data sets. This in turn requires a consistent characterization and deep understanding of the systematic differences and errors in the individual data sets, which vary due to...

  20. LANDSAT/coastal processes

    NASA Technical Reports Server (NTRS)

    James, W. P. (Principal Investigator); Hill, J. M.; Bright, J. B.

    1977-01-01

    The author has identified the following significant results. Correlations between the satellite radiance values water color, Secchi disk visibility, turbidity, and attenuation coefficients were generally good. The residual was due to several factors including systematic errors in the remotely sensed data, errors, small time and space variations in the water quality measurements, and errors caused by experimental design. Satellite radiance values were closely correlated with the optical properties of the water.

  1. The distribution of probability values in medical abstracts: an observational study.

    PubMed

    Ginsel, Bastiaan; Aggarwal, Abhinav; Xuan, Wei; Harris, Ian

    2015-11-26

    A relatively high incidence of p values immediately below 0.05 (such as 0.047 or 0.04) compared to p values immediately above 0.05 (such as 0.051 or 0.06) has been noticed anecdotally in published medical abstracts. If p values immediately below 0.05 are over-represented, such a distribution may reflect the true underlying distribution of p values or may be due to error (a false distribution). If due to error, a consistent over-representation of p values immediately below 0.05 would be a systematic error due either to publication bias or (overt or inadvertent) bias within studies. We searched the Medline 2012 database to identify abstracts containing a p value. Two thousand abstracts out of 80,649 abstracts were randomly selected. Two independent researchers extracted all p values. The p values were plotted and compared to a predicted curve. Chi square test was used to test assumptions and significance was set at 0.05. 2798 p value ranges and 3236 exact p values were reported. 4973 of these (82%) were significant (<0.05). There was an over-representation of p values immediately below 0.05 (between 0.01 and 0.049) compared to those immediately above 0.05 (between 0.05 and 0.1) (p = 0.001). The distribution of p values in reported medical abstracts provides evidence for systematic error in the reporting of p values. This may be due to publication bias, methodological errors (underpowering, selective reporting and selective analyses) or fraud.

  2. System calibration method for Fourier ptychographic microscopy

    NASA Astrophysics Data System (ADS)

    Pan, An; Zhang, Yan; Zhao, Tianyu; Wang, Zhaojun; Dan, Dan; Lei, Ming; Yao, Baoli

    2017-09-01

    Fourier ptychographic microscopy (FPM) is a recently proposed computational imaging technique with both high-resolution and wide field of view. In current FPM imaging platforms, systematic error sources come from aberrations, light-emitting diode (LED) intensity fluctuation, parameter imperfections, and noise, all of which may severely corrupt the reconstruction results with similar artifacts. Therefore, it would be unlikely to distinguish the dominating error from these degraded reconstructions without any preknowledge. In addition, systematic error is generally a mixture of various error sources in the real situation, and it cannot be separated due to their mutual restriction and conversion. To this end, we report a system calibration procedure, termed SC-FPM, to calibrate the mixed systematic errors simultaneously from an overall perspective, based on the simulated annealing algorithm, the LED intensity correction method, the nonlinear regression process, and the adaptive step-size strategy, which involves the evaluation of an error metric at each iteration step, followed by the re-estimation of accurate parameters. The performance achieved both in simulations and experiments demonstrates that the proposed method outperforms other state-of-the-art algorithms. The reported system calibration scheme improves the robustness of FPM, relaxes the experiment conditions, and does not require any preknowledge, which makes the FPM more pragmatic.

  3. Dealing with systematic laser scanner errors due to misalignment at area-based deformation analyses

    NASA Astrophysics Data System (ADS)

    Holst, Christoph; Medić, Tomislav; Kuhlmann, Heiner

    2018-04-01

    The ability to acquire rapid, dense and high quality 3D data has made terrestrial laser scanners (TLS) a desirable instrument for tasks demanding a high geometrical accuracy, such as geodetic deformation analyses. However, TLS measurements are influenced by systematic errors due to internal misalignments of the instrument. The resulting errors in the point cloud might exceed the magnitude of random errors. Hence, it is important to assure that the deformation analysis is not biased by these influences. In this study, we propose and evaluate several strategies for reducing the effect of TLS misalignments on deformation analyses. The strategies are based on the bundled in-situ self-calibration and on the exploitation of two-face measurements. The strategies are verified analyzing the deformation of the Onsala Space Observatory's radio telescope's main reflector. It is demonstrated that either two-face measurements as well as the in-situ calibration of the laser scanner in a bundle adjustment improve the results of deformation analysis. The best solution is gained by a combination of both strategies.

  4. Fluorescence decay data analysis correcting for detector pulse pile-up at very high count rates

    NASA Astrophysics Data System (ADS)

    Patting, Matthias; Reisch, Paja; Sackrow, Marcus; Dowler, Rhys; Koenig, Marcelle; Wahl, Michael

    2018-03-01

    Using time-correlated single photon counting for the purpose of fluorescence lifetime measurements is usually limited in speed due to pile-up. With modern instrumentation, this limitation can be lifted significantly, but some artifacts due to frequent merging of closely spaced detector pulses (detector pulse pile-up) remain an issue to be addressed. We propose a data analysis method correcting for this type of artifact and the resulting systematic errors. It physically models the photon losses due to detector pulse pile-up and incorporates the loss in the decay fit model employed to obtain fluorescence lifetimes and relative amplitudes of the decay components. Comparison of results with and without this correction shows a significant reduction of systematic errors at count rates approaching the excitation rate. This allows quantitatively accurate fluorescence lifetime imaging at very high frame rates.

  5. Solutions to decrease a systematic error related to AAPH addition in the fluorescence-based ORAC assay.

    PubMed

    Mellado-Ortega, Elena; Zabalgogeazcoa, Iñigo; Vázquez de Aldana, Beatriz R; Arellano, Juan B

    2017-02-15

    Oxygen radical absorbance capacity (ORAC) assay in 96-well multi-detection plate readers is a rapid method to determine total antioxidant capacity (TAC) in biological samples. A disadvantage of this method is that the antioxidant inhibition reaction does not start in all of the 96 wells at the same time due to technical limitations when dispensing the free radical-generating azo initiator 2,2'-azobis (2-methyl-propanimidamide) dihydrochloride (AAPH). The time delay between wells yields a systematic error that causes statistically significant differences in TAC determination of antioxidant solutions depending on their plate position. We propose two alternative solutions to avoid this AAPH-dependent error in ORAC assays. Copyright © 2016 Elsevier Inc. All rights reserved.

  6. Hadronic Contribution to Muon g-2 with Systematic Error Correlations

    NASA Astrophysics Data System (ADS)

    Brown, D. H.; Worstell, W. A.

    1996-05-01

    We have performed a new evaluation of the hadronic contribution to a_μ=(g-2)/2 of the muon with explicit correlations of systematic errors among the experimental data on σ( e^+e^- → hadrons ). Our result for the lowest order hadronic vacuum polarization contribution is a_μ^hvp = 701.7(7.6)(13.4) × 10-10 where the total systematic error contributions from below and above √s = 1.4 GeV are (12.5) × 10-10 and (4.8) × 10-10 respectively. Therefore new measurements on σ( e^+e^- → hadrons ) below 1.4 GeV in Novosibirsk, Russia can significantly reduce the total error on a_μ^hvp. This contrasts with a previous evaluation which indicated that the dominant error is due to the energy region above 1.4 GeV. The latter analysis correlated systematic errors at each energy point separately but not across energy ranges as we have done. Combination with higher order hadronic contributions is required for a new measurement of a_μ at Brookhaven National Laboratory to be sensitive to electroweak and possibly supergravity and muon substructure effects. Our analysis may also be applied to calculations of hadronic contributions to the running of α(s) at √s= M_Z, the hyperfine structure of muonium, and the running of sin^2 θW in Møller scattering. The analysis of the new Novosibirsk data will also be given.

  7. System calibration method for Fourier ptychographic microscopy.

    PubMed

    Pan, An; Zhang, Yan; Zhao, Tianyu; Wang, Zhaojun; Dan, Dan; Lei, Ming; Yao, Baoli

    2017-09-01

    Fourier ptychographic microscopy (FPM) is a recently proposed computational imaging technique with both high-resolution and wide field of view. In current FPM imaging platforms, systematic error sources come from aberrations, light-emitting diode (LED) intensity fluctuation, parameter imperfections, and noise, all of which may severely corrupt the reconstruction results with similar artifacts. Therefore, it would be unlikely to distinguish the dominating error from these degraded reconstructions without any preknowledge. In addition, systematic error is generally a mixture of various error sources in the real situation, and it cannot be separated due to their mutual restriction and conversion. To this end, we report a system calibration procedure, termed SC-FPM, to calibrate the mixed systematic errors simultaneously from an overall perspective, based on the simulated annealing algorithm, the LED intensity correction method, the nonlinear regression process, and the adaptive step-size strategy, which involves the evaluation of an error metric at each iteration step, followed by the re-estimation of accurate parameters. The performance achieved both in simulations and experiments demonstrates that the proposed method outperforms other state-of-the-art algorithms. The reported system calibration scheme improves the robustness of FPM, relaxes the experiment conditions, and does not require any preknowledge, which makes the FPM more pragmatic. (2017) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

  8. Dynamically corrected gates for singlet-triplet spin qubits with control-dependent errors

    NASA Astrophysics Data System (ADS)

    Jacobson, N. Tobias; Witzel, Wayne M.; Nielsen, Erik; Carroll, Malcolm S.

    2013-03-01

    Magnetic field inhomogeneity due to random polarization of quasi-static local magnetic impurities is a major source of environmentally induced error for singlet-triplet double quantum dot (DQD) spin qubits. Moreover, for singlet-triplet qubits this error may depend on the applied controls. This effect is significant when a static magnetic field gradient is applied to enable full qubit control. Through a configuration interaction analysis, we observe that the dependence of the field inhomogeneity-induced error on the DQD bias voltage can vary systematically as a function of the controls for certain experimentally relevant operating regimes. To account for this effect, we have developed a straightforward prescription for adapting dynamically corrected gate sequences that assume control-independent errors into sequences that compensate for systematic control-dependent errors. We show that accounting for such errors may lead to a substantial increase in gate fidelities. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. DOE's National Nuclear Security Administration under contract DE-AC04-94AL85000.

  9. Optical truss and retroreflector modeling for picometer laser metrology

    NASA Astrophysics Data System (ADS)

    Hines, Braden E.

    1993-09-01

    Space-based astrometric interferometer concepts typically have a requirement for the measurement of the internal dimensions of the instrument to accuracies in the picometer range. While this level of resolution has already been achieved for certain special types of laser gauges, techniques for picometer-level accuracy need to be developed to enable all the various kinds of laser gauges needed for space-based interferometers. Systematic errors due to retroreflector imperfections become important as soon as the retroreflector is allowed to either translate in position or articulate in angle away from its nominal zero-point. Also, when combining several laser interferometers to form a three-dimensional laser gauge (a laser optical truss), systematic errors due to imperfect knowledge of the truss geometry are important as the retroreflector translates away from its nominal zero-point. In order to assess the astrometric performance of a proposed instrument, it is necessary to determine how the effects of an imperfect laser metrology system impact the astrometric accuracy. This paper show the development of an error propagation model from errors in the 1-D metrology measurements through the impact on the overall astrometric accuracy for OSI. Simulations are then presented based on this development which were used to define a multiplier which determines the 1-D metrology accuracy required to produce a given amount of fringe position error.

  10. Global Warming Estimation from MSU

    NASA Technical Reports Server (NTRS)

    Prabhakara, C.; Iacovazzi, Robert, Jr.

    1999-01-01

    In this study, we have developed time series of global temperature from 1980-97 based on the Microwave Sounding Unit (MSU) Ch 2 (53.74 GHz) observations taken from polar-orbiting NOAA operational satellites. In order to create these time series, systematic errors (approx. 0.1 K) in the Ch 2 data arising from inter-satellite differences are removed objectively. On the other hand, smaller systematic errors (approx. 0.03 K) in the data due to orbital drift of each satellite cannot be removed objectively. Such errors are expected to remain in the time series and leave an uncertainty in the inferred global temperature trend. With the help of a statistical method, the error in the MSU inferred global temperature trend resulting from orbital drifts and residual inter-satellite differences of all satellites is estimated to be 0.06 K decade. Incorporating this error, our analysis shows that the global temperature increased at a rate of 0.13 +/- 0.06 K decade during 1980-97.

  11. Is the four-day rotation of Venus illusory?. [includes systematic error in radial velocities of solar lines reflected from Venus

    NASA Technical Reports Server (NTRS)

    Young, A. T.

    1974-01-01

    An overlooked systematic error exists in the apparent radial velocities of solar lines reflected from regions of Venus near the terminator, owing to a combination of the finite angular size of the Sun and its large (2 km/sec) equatorial velocity of rotation. This error produces an apparent, but fictitious, retrograde component of planetary rotation, typically on the order of 40 meters/sec. Spectroscopic, photometric, and radiometric evidence against a 4-day atmospheric rotation is also reviewed. The bulk of the somewhat contradictory evidence seems to favor slow motions, on the order of 5 m/sec, in the atmosphere of Venus; the 4-day rotation may be due to a traveling wave-like disturbance, not bulk motions, driven by the UV albedo differences.

  12. Uncertainties in climate data sets

    NASA Technical Reports Server (NTRS)

    Mcguirk, James P.

    1992-01-01

    Climate diagnostics are constructed from either analyzed fields or from observational data sets. Those that have been commonly used are normally considered ground truth. However, in most of these collections, errors and uncertainties exist which are generally ignored due to the consistency of usage over time. Examples of uncertainties and errors are described in NMC and ECMWF analyses and in satellite observational sets-OLR, TOVS, and SMMR. It is suggested that these errors can be large, systematic, and not negligible in climate analysis.

  13. Intrinsic errors in transporting a single-spin qubit through a double quantum dot

    NASA Astrophysics Data System (ADS)

    Li, Xiao; Barnes, Edwin; Kestner, J. P.; Das Sarma, S.

    2017-07-01

    Coherent spatial transport or shuttling of a single electron spin through semiconductor nanostructures is an important ingredient in many spintronic and quantum computing applications. In this work we analyze the possible errors in solid-state quantum computation due to leakage in transporting a single-spin qubit through a semiconductor double quantum dot. In particular, we consider three possible sources of leakage errors associated with such transport: finite ramping times, spin-dependent tunneling rates between quantum dots induced by finite spin-orbit couplings, and the presence of multiple valley states. In each case we present quantitative estimates of the leakage errors, and discuss how they can be minimized. The emphasis of this work is on how to deal with the errors intrinsic to the ideal semiconductor structure, such as leakage due to spin-orbit couplings, rather than on errors due to defects or noise sources. In particular, we show that in order to minimize leakage errors induced by spin-dependent tunnelings, it is necessary to apply pulses to perform certain carefully designed spin rotations. We further develop a formalism that allows one to systematically derive constraints on the pulse shapes and present a few examples to highlight the advantage of such an approach.

  14. Sampling Errors in Monthly Rainfall Totals for TRMM and SSM/I, Based on Statistics of Retrieved Rain Rates and Simple Models

    NASA Technical Reports Server (NTRS)

    Bell, Thomas L.; Kundu, Prasun K.; Einaudi, Franco (Technical Monitor)

    2000-01-01

    Estimates from TRMM satellite data of monthly total rainfall over an area are subject to substantial sampling errors due to the limited number of visits to the area by the satellite during the month. Quantitative comparisons of TRMM averages with data collected by other satellites and by ground-based systems require some estimate of the size of this sampling error. A method of estimating this sampling error based on the actual statistics of the TRMM observations and on some modeling work has been developed. "Sampling error" in TRMM monthly averages is defined here relative to the monthly total a hypothetical satellite permanently stationed above the area would have reported. "Sampling error" therefore includes contributions from the random and systematic errors introduced by the satellite remote sensing system. As part of our long-term goal of providing error estimates for each grid point accessible to the TRMM instruments, sampling error estimates for TRMM based on rain retrievals from TRMM microwave (TMI) data are compared for different times of the year and different oceanic areas (to minimize changes in the statistics due to algorithmic differences over land and ocean). Changes in sampling error estimates due to changes in rain statistics due 1) to evolution of the official algorithms used to process the data, and 2) differences from other remote sensing systems such as the Defense Meteorological Satellite Program (DMSP) Special Sensor Microwave/Imager (SSM/I), are analyzed.

  15. The Role of Model and Initial Condition Error in Numerical Weather Forecasting Investigated with an Observing System Simulation Experiment

    NASA Technical Reports Server (NTRS)

    Prive, Nikki C.; Errico, Ronald M.

    2013-01-01

    A series of experiments that explore the roles of model and initial condition error in numerical weather prediction are performed using an observing system simulation experiment (OSSE) framework developed at the National Aeronautics and Space Administration Global Modeling and Assimilation Office (NASA/GMAO). The use of an OSSE allows the analysis and forecast errors to be explicitly calculated, and different hypothetical observing networks can be tested with ease. In these experiments, both a full global OSSE framework and an 'identical twin' OSSE setup are utilized to compare the behavior of the data assimilation system and evolution of forecast skill with and without model error. The initial condition error is manipulated by varying the distribution and quality of the observing network and the magnitude of observation errors. The results show that model error has a strong impact on both the quality of the analysis field and the evolution of forecast skill, including both systematic and unsystematic model error components. With a realistic observing network, the analysis state retains a significant quantity of error due to systematic model error. If errors of the analysis state are minimized, model error acts to rapidly degrade forecast skill during the first 24-48 hours of forward integration. In the presence of model error, the impact of observation errors on forecast skill is small, but in the absence of model error, observation errors cause a substantial degradation of the skill of medium range forecasts.

  16. Manifestations of geometric phases in a proton electric-dipole-moment experiment in an all-electric storage ring

    NASA Astrophysics Data System (ADS)

    Silenko, Alexander J.

    2017-12-01

    We consider a proton electric-dipole-moment experiment in an all-electric storage ring when the spin is frozen and local longitudinal and vertical electric fields alternate. In this experiment, the geometric (Berry) phases are very important. Due to the these phases, the spin rotates about the radial axis. The corresponding systematic error is rather important while it can be canceled with clockwise and counterclockwise beams. The geometric phases also lead to the spin rotation about the radial axis. This effect can be canceled with clockwise and counterclockwise beams as well. The sign of the azimuthal component of the angular velocity of the spin precession depends on the starting point where the spin orientation is perfect. The radial component of this quantity keeps its value and sign for each starting point. When the longitudinal and vertical electric fields are joined in the same sections without any alternation, the systematic error due to the geometric phases does not appear but another systematic effect of the spin rotation about the azimuthal axis takes place. It has opposite signs for clockwise and counterclockwise beams.

  17. Simplified model of pinhole imaging for quantifying systematic errors in image shape

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Benedetti, Laura Robin; Izumi, N.; Khan, S. F.

    In this paper, we examine systematic errors in x-ray imaging by pinhole optics for quantifying uncertainties in the measurement of convergence and asymmetry in inertial confinement fusion implosions. We present a quantitative model for the total resolution of a pinhole optic with an imaging detector that more effectively describes the effect of diffraction than models that treat geometry and diffraction as independent. This model can be used to predict loss of shape detail due to imaging across the transition from geometric to diffractive optics. We find that fractional error in observable shapes is proportional to the total resolution element wemore » present and inversely proportional to the length scale of the asymmetry being observed. Finally, we have experimentally validated our results by imaging a single object with differently sized pinholes and with different magnifications.« less

  18. Simplified model of pinhole imaging for quantifying systematic errors in image shape

    DOE PAGES

    Benedetti, Laura Robin; Izumi, N.; Khan, S. F.; ...

    2017-10-30

    In this paper, we examine systematic errors in x-ray imaging by pinhole optics for quantifying uncertainties in the measurement of convergence and asymmetry in inertial confinement fusion implosions. We present a quantitative model for the total resolution of a pinhole optic with an imaging detector that more effectively describes the effect of diffraction than models that treat geometry and diffraction as independent. This model can be used to predict loss of shape detail due to imaging across the transition from geometric to diffractive optics. We find that fractional error in observable shapes is proportional to the total resolution element wemore » present and inversely proportional to the length scale of the asymmetry being observed. Finally, we have experimentally validated our results by imaging a single object with differently sized pinholes and with different magnifications.« less

  19. Identification and correction of systematic error in high-throughput sequence data

    PubMed Central

    2011-01-01

    Background A feature common to all DNA sequencing technologies is the presence of base-call errors in the sequenced reads. The implications of such errors are application specific, ranging from minor informatics nuisances to major problems affecting biological inferences. Recently developed "next-gen" sequencing technologies have greatly reduced the cost of sequencing, but have been shown to be more error prone than previous technologies. Both position specific (depending on the location in the read) and sequence specific (depending on the sequence in the read) errors have been identified in Illumina and Life Technology sequencing platforms. We describe a new type of systematic error that manifests as statistically unlikely accumulations of errors at specific genome (or transcriptome) locations. Results We characterize and describe systematic errors using overlapping paired reads from high-coverage data. We show that such errors occur in approximately 1 in 1000 base pairs, and that they are highly replicable across experiments. We identify motifs that are frequent at systematic error sites, and describe a classifier that distinguishes heterozygous sites from systematic error. Our classifier is designed to accommodate data from experiments in which the allele frequencies at heterozygous sites are not necessarily 0.5 (such as in the case of RNA-Seq), and can be used with single-end datasets. Conclusions Systematic errors can easily be mistaken for heterozygous sites in individuals, or for SNPs in population analyses. Systematic errors are particularly problematic in low coverage experiments, or in estimates of allele-specific expression from RNA-Seq data. Our characterization of systematic error has allowed us to develop a program, called SysCall, for identifying and correcting such errors. We conclude that correction of systematic errors is important to consider in the design and interpretation of high-throughput sequencing experiments. PMID:22099972

  20. Coping with medical error: a systematic review of papers to assess the effects of involvement in medical errors on healthcare professionals' psychological well-being.

    PubMed

    Sirriyeh, Reema; Lawton, Rebecca; Gardner, Peter; Armitage, Gerry

    2010-12-01

    Previous research has established health professionals as secondary victims of medical error, with the identification of a range of emotional and psychological repercussions that may occur as a result of involvement in error.2 3 Due to the vast range of emotional and psychological outcomes, research to date has been inconsistent in the variables measured and tools used. Therefore, differing conclusions have been drawn as to the nature of the impact of error on professionals and the subsequent repercussions for their team, patients and healthcare institution. A systematic review was conducted. Data sources were identified using database searches, with additional reference and hand searching. Eligibility criteria were applied to all studies identified, resulting in a total of 24 included studies. Quality assessment was conducted with the included studies using a tool that was developed as part of this research, but due to the limited number and diverse nature of studies, no exclusions were made on this basis. Review findings suggest that there is consistent evidence for the widespread impact of medical error on health professionals. Psychological repercussions may include negative states such as shame, self-doubt, anxiety and guilt. Despite much attention devoted to the assessment of negative outcomes, the potential for positive outcomes resulting from error also became apparent, with increased assertiveness, confidence and improved colleague relationships reported. It is evident that involvement in a medical error can elicit a significant psychological response from the health professional involved. However, a lack of literature around coping and support, coupled with inconsistencies and weaknesses in methodology, may need be addressed in future work.

  1. Systematic evaluation of NASA precipitation radar estimates using NOAA/NSSL National Mosaic QPE products

    NASA Astrophysics Data System (ADS)

    Kirstetter, P.; Hong, Y.; Gourley, J. J.; Chen, S.; Flamig, Z.; Zhang, J.; Howard, K.; Petersen, W. A.

    2011-12-01

    Proper characterization of the error structure of TRMM Precipitation Radar (PR) quantitative precipitation estimation (QPE) is needed for their use in TRMM combined products, water budget studies and hydrological modeling applications. Due to the variety of sources of error in spaceborne radar QPE (attenuation of the radar signal, influence of land surface, impact of off-nadir viewing angle, etc.) and the impact of correction algorithms, the problem is addressed by comparison of PR QPEs with reference values derived from ground-based measurements (GV) using NOAA/NSSL's National Mosaic QPE (NMQ) system. An investigation of this subject has been carried out at the PR estimation scale (instantaneous and 5 km) on the basis of a 3-month-long data sample. A significant effort has been carried out to derive a bias-corrected, robust reference rainfall source from NMQ. The GV processing details will be presented along with preliminary results of PR's error characteristics using contingency table statistics, probability distribution comparisons, scatter plots, semi-variograms, and systematic biases and random errors.

  2. "Bed Side" Human Milk Analysis in the Neonatal Intensive Care Unit: A Systematic Review.

    PubMed

    Fusch, Gerhard; Kwan, Celia; Kotrri, Gynter; Fusch, Christoph

    2017-03-01

    Human milk analyzers can measure macronutrient content in native breast milk to tailor adequate supplementation with fortifiers. This article reviews all studies using milk analyzers, including (i) evaluation of devices, (ii) the impact of different conditions on the macronutrient analysis of human milk, and (iii) clinical trials to improve growth. Results lack consistency, potentially due to systematic errors in the validation of the device, or pre-analytical sample preparation errors like homogenization. It is crucial to introduce good laboratory and clinical practice when using these devices; otherwise a non-validated clinical usage can severely affect growth outcomes of infants. Copyright © 2016 Elsevier Inc. All rights reserved.

  3. Investigating Systematic Errors of the Interstellar Flow Longitude Derived from the Pickup Ion Cutoff

    NASA Astrophysics Data System (ADS)

    Taut, A.; Berger, L.; Drews, C.; Bower, J.; Keilbach, D.; Lee, M. A.; Moebius, E.; Wimmer-Schweingruber, R. F.

    2017-12-01

    Complementary to the direct neutral particle measurements performed by e.g. IBEX, the measurement of PickUp Ions (PUIs) constitutes a diagnostic tool to investigate the local interstellar medium. PUIs are former neutral particles that have been ionized in the inner heliosphere. Subsequently, they are picked up by the solar wind and its frozen-in magnetic field. Due to this process, a characteristic Velocity Distribution Function (VDF) with a sharp cutoff evolves, which carries information about the PUI's injection speed and thus the former neutral particle velocity. The symmetry of the injection speed about the interstellar flow vector is used to derive the interstellar flow longitude from PUI measurements. Using He PUI data obtained by the PLASTIC sensor on STEREO A, we investigate how this concept may be affected by systematic errors. The PUI VDF strongly depends on the orientation of the local interplanetary magnetic field. Recently injected PUIs with speeds just below the cutoff speed typically form a highly anisotropic torus distribution in velocity space, which leads to a longitudinal transport for certain magnetic field orientation. Therefore, we investigate how the selection of magnetic field configurations in the data affects the result for the interstellar flow longitude that we derive from the PUI cutoff. Indeed, we find that the results follow a systematic trend with the filtered magnetic field angles that can lead to a shift of the result up to 5°. In turn, this means that every value for the interstellar flow longitude derived from the PUI cutoff is affected by a systematic error depending on the utilized magnetic field orientations. Here, we present our observations, discuss possible reasons for the systematic trend we discovered, and indicate selections that may minimize the systematic errors.

  4. Horizon sensors attitude errors simulation for the Brazilian Remote Sensing Satellite

    NASA Astrophysics Data System (ADS)

    Vicente de Brum, Antonio Gil; Ricci, Mario Cesar

    Remote sensing, meteorological and other types of satellites require an increasingly better Earth related positioning. From the past experience it is well known that the thermal horizon in the 15 micrometer band provides conditions of determining the local vertical at any time. This detection is done by horizon sensors which are accurate instruments for Earth referred attitude sensing and control whose performance is limited by systematic and random errors amounting about 0.5 deg. Using the computer programs OBLATE, SEASON, ELECTRO and MISALIGN, developed at INPE to simulate four distinct facets of conical scanning horizon sensors, attitude errors are obtained for the Brazilian Remote Sensing Satellite (the first one, SSR-1, is scheduled to fly in 1996). These errors are due to the oblate shape of the Earth, seasonal and latitudinal variations of the 15 micrometer infrared radiation, electronic processing time delay and misalignment of sensor axis. The sensor related attitude errors are thus properly quantified in this work and will, together with other systematic errors (for instance, ambient temperature variation) take part in the pre-launch analysis of the Brazilian Remote Sensing Satellite, with respect to the horizon sensor performance.

  5. On Test-Wiseness and Some Related Constructs

    ERIC Educational Resources Information Center

    Nilsson, Ingvar; Wedman, Ingemar

    1976-01-01

    States that, due to confusion of concepts and lack of systemization, "previous studies are often difficult to interpret and consequently...afford little possibility of formulating more precise statements about those errors the concepts represent...." A proposal for systematization is presented. (Author/RW)

  6. Accuracy and Landmark Error Calculation Using Cone-Beam Computed Tomography–Generated Cephalograms

    PubMed Central

    Grauer, Dan; Cevidanes, Lucia S. H.; Styner, Martin A.; Heulfe, Inam; Harmon, Eric T.; Zhu, Hongtu; Proffit, William R.

    2010-01-01

    Objective To evaluate systematic differences in landmark position between cone-beam computed tomography (CBCT)–generated cephalograms and conventional digital cephalograms and to estimate how much variability should be taken into account when both modalities are used within the same longitudinal study. Materials and Methods Landmarks on homologous cone-beam computed tomographic–generated cephalograms and conventional digital cephalograms of 46 patients were digitized, registered, and compared via the Hotelling T2 test. Results There were no systematic differences between modalities in the position of most landmarks. Three landmarks showed statistically significant differences but did not reach clinical significance. A method for error calculation while combining both modalities in the same individual is presented. Conclusion In a longitudinal follow-up for assessment of treatment outcomes and growth of one individual, the error due to the combination of the two modalities might be larger than previously estimated. PMID:19905853

  7. Computational investigations and grid refinement study of 3D transient flow in a cylindrical tank using OpenFOAM

    NASA Astrophysics Data System (ADS)

    Mohd Sakri, F.; Mat Ali, M. S.; Sheikh Salim, S. A. Z.

    2016-10-01

    The study of physic fluid for a liquid draining inside a tank is easily accessible using numerical simulation. However, numerical simulation is expensive when the liquid draining involves the multi-phase problem. Since an accurate numerical simulation can be obtained if a proper method for error estimation is accomplished, this paper provides systematic assessment of error estimation due to grid convergence error using OpenFOAM. OpenFOAM is an open source CFD-toolbox and it is well-known among the researchers and institutions because of its free applications and ready to use. In this study, three types of grid resolution are used: coarse, medium and fine grids. Grid Convergence Index (GCI) is applied to estimate the error due to the grid sensitivity. A monotonic convergence condition is obtained in this study that shows the grid convergence error has been progressively reduced. The fine grid has the GCI value below 1%. The extrapolated value from Richardson Extrapolation is in the range of the GCI obtained.

  8. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lee, Y; Fullerton, G; Goins, B

    Purpose: In our previous study a preclinical multi-modality quality assurance (QA) phantom that contains five tumor-simulating test objects with 2, 4, 7, 10 and 14 mm diameters was developed for accurate tumor size measurement by researchers during cancer drug development and testing. This study analyzed the errors during tumor volume measurement from preclinical magnetic resonance (MR), micro-computed tomography (micro- CT) and ultrasound (US) images acquired in a rodent tumor model using the preclinical multi-modality QA phantom. Methods: Using preclinical 7-Tesla MR, US and micro-CT scanners, images were acquired of subcutaneous SCC4 tumor xenografts in nude rats (3–4 rats per group;more » 5 groups) along with the QA phantom using the same imaging protocols. After tumors were excised, in-air micro-CT imaging was performed to determine reference tumor volume. Volumes measured for the rat tumors and phantom test objects were calculated using formula V = (π/6)*a*b*c where a, b and c are the maximum diameters in three perpendicular dimensions determined by the three imaging modalities. Then linear regression analysis was performed to compare image-based tumor volumes with the reference tumor volume and known test object volume for the rats and the phantom respectively. Results: The slopes of regression lines for in-vivo tumor volumes measured by three imaging modalities were 1.021, 1.101 and 0.862 for MRI, micro-CT and US respectively. For phantom, the slopes were 0.9485, 0.9971 and 0.9734 for MRI, micro-CT and US respectively. Conclusion: For both animal and phantom studies, random and systematic errors were observed. Random errors were observer-dependent and systematic errors were mainly due to selected imaging protocols and/or measurement method. In the animal study, there were additional systematic errors attributed to ellipsoidal assumption for tumor shape. The systematic errors measured using the QA phantom need to be taken into account to reduce measurement errors during the animal study.« less

  9. A Systematic Approach to Error Free Telemetry

    DTIC Science & Technology

    2017-06-28

    A SYSTEMATIC APPROACH TO ERROR FREE TELEMETRY 412TW-TIM-17-03 DISTRIBUTION A: Approved for public release. Distribution is...Systematic Approach to Error-Free Telemetry) was submitted by the Commander, 412th Test Wing, Edwards AFB, California 93524. Prepared by...Technical Information Memorandum 3. DATES COVERED (From - Through) February 2016 4. TITLE AND SUBTITLE A Systematic Approach to Error-Free

  10. Systematic bias in genomic classification due to contaminating non-neoplastic tissue in breast tumor samples.

    PubMed

    Elloumi, Fathi; Hu, Zhiyuan; Li, Yan; Parker, Joel S; Gulley, Margaret L; Amos, Keith D; Troester, Melissa A

    2011-06-30

    Genomic tests are available to predict breast cancer recurrence and to guide clinical decision making. These predictors provide recurrence risk scores along with a measure of uncertainty, usually a confidence interval. The confidence interval conveys random error and not systematic bias. Standard tumor sampling methods make this problematic, as it is common to have a substantial proportion (typically 30-50%) of a tumor sample comprised of histologically benign tissue. This "normal" tissue could represent a source of non-random error or systematic bias in genomic classification. To assess the performance characteristics of genomic classification to systematic error from normal contamination, we collected 55 tumor samples and paired tumor-adjacent normal tissue. Using genomic signatures from the tumor and paired normal, we evaluated how increasing normal contamination altered recurrence risk scores for various genomic predictors. Simulations of normal tissue contamination caused misclassification of tumors in all predictors evaluated, but different breast cancer predictors showed different types of vulnerability to normal tissue bias. While two predictors had unpredictable direction of bias (either higher or lower risk of relapse resulted from normal contamination), one signature showed predictable direction of normal tissue effects. Due to this predictable direction of effect, this signature (the PAM50) was adjusted for normal tissue contamination and these corrections improved sensitivity and negative predictive value. For all three assays quality control standards and/or appropriate bias adjustment strategies can be used to improve assay reliability. Normal tissue sampled concurrently with tumor is an important source of bias in breast genomic predictors. All genomic predictors show some sensitivity to normal tissue contamination and ideal strategies for mitigating this bias vary depending upon the particular genes and computational methods used in the predictor.

  11. A Systematic Error Correction Method for TOVS Radiances

    NASA Technical Reports Server (NTRS)

    Joiner, Joanna; Rokke, Laurie; Einaudi, Franco (Technical Monitor)

    2000-01-01

    Treatment of systematic errors is crucial for the successful use of satellite data in a data assimilation system. Systematic errors in TOVS radiance measurements and radiative transfer calculations can be as large or larger than random instrument errors. The usual assumption in data assimilation is that observational errors are unbiased. If biases are not effectively removed prior to assimilation, the impact of satellite data will be lessened and can even be detrimental. Treatment of systematic errors is important for short-term forecast skill as well as the creation of climate data sets. A systematic error correction algorithm has been developed as part of a 1D radiance assimilation. This scheme corrects for spectroscopic errors, errors in the instrument response function, and other biases in the forward radiance calculation for TOVS. Such algorithms are often referred to as tuning of the radiances. The scheme is able to account for the complex, air-mass dependent biases that are seen in the differences between TOVS radiance observations and forward model calculations. We will show results of systematic error correction applied to the NOAA 15 Advanced TOVS as well as its predecessors. We will also discuss the ramifications of inter-instrument bias with a focus on stratospheric measurements.

  12. Effects of waveform model systematics on the interpretation of GW150914

    NASA Astrophysics Data System (ADS)

    Abbott, B. P.; Abbott, R.; Abbott, T. D.; Abernathy, M. R.; Acernese, F.; Ackley, K.; Adams, C.; Adams, T.; Addesso, P.; Adhikari, R. X.; Adya, V. B.; Affeldt, C.; Agathos, M.; Agatsuma, K.; Aggarwal, N.; Aguiar, O. D.; Aiello, L.; Ain, A.; Ajith, P.; Allen, B.; Allocca, A.; Altin, P. A.; Ananyeva, A.; Anderson, S. B.; Anderson, W. G.; Appert, S.; Arai, K.; Araya, M. C.; Areeda, J. S.; Arnaud, N.; Arun, K. G.; Ascenzi, S.; Ashton, G.; Ast, M.; Aston, S. M.; Astone, P.; Aufmuth, P.; Aulbert, C.; Avila-Alvarez, A.; Babak, S.; Bacon, P.; Bader, M. K. M.; Baker, P. T.; Baldaccini, F.; Ballardin, G.; Ballmer, S. W.; Barayoga, J. C.; E Barclay, S.; Barish, B. C.; Barker, D.; Barone, F.; Barr, B.; Barsotti, L.; Barsuglia, M.; Barta, D.; Bartlett, J.; Bartos, I.; Bassiri, R.; Basti, A.; Batch, J. C.; Baune, C.; Bavigadda, V.; Bazzan, M.; Beer, C.; Bejger, M.; Belahcene, I.; Belgin, M.; Bell, A. S.; Berger, B. K.; Bergmann, G.; Berry, C. P. L.; Bersanetti, D.; Bertolini, A.; Betzwieser, J.; Bhagwat, S.; Bhandare, R.; Bilenko, I. A.; Billingsley, G.; Billman, C. R.; Birch, J.; Birney, R.; Birnholtz, O.; Biscans, S.; Bisht, A.; Bitossi, M.; Biwer, C.; Bizouard, M. A.; Blackburn, J. K.; Blackman, J.; Blair, C. D.; Blair, D. G.; Blair, R. M.; Bloemen, S.; Bock, O.; Boer, M.; Bogaert, G.; Bohe, A.; Bondu, F.; Bonnand, R.; Boom, B. A.; Bork, R.; Boschi, V.; Bose, S.; Bouffanais, Y.; Bozzi, A.; Bradaschia, C.; Brady, P. R.; Braginsky, V. B.; Branchesi, M.; E Brau, J.; Briant, T.; Brillet, A.; Brinkmann, M.; Brisson, V.; Brockill, P.; E Broida, J.; Brooks, A. F.; Brown, D. A.; Brown, D. D.; Brown, N. M.; Brunett, S.; Buchanan, C. C.; Buikema, A.; Bulik, T.; Bulten, H. J.; Buonanno, A.; Buskulic, D.; Buy, C.; Byer, R. L.; Cabero, M.; Cadonati, L.; Cagnoli, G.; Cahillane, C.; Calderón Bustillo, J.; Callister, T. A.; Calloni, E.; Camp, J. B.; Cannon, K. C.; Cao, H.; Cao, J.; Capano, C. 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J.; Masso-Reid, M.; Mastrogiovanni, S.; Matichard, F.; Matone, L.; Mavalvala, N.; Mazumder, N.; McCarthy, R.; E McClelland, D.; McCormick, S.; McGrath, C.; McGuire, S. C.; McIntyre, G.; McIver, J.; McManus, D. J.; McRae, T.; McWilliams, S. T.; Meacher, D.; Meadors, G. D.; Meidam, J.; Melatos, A.; Mendell, G.; Mendoza-Gandara, D.; Mercer, R. A.; Merilh, E. L.; Merzougui, M.; Meshkov, S.; Messenger, C.; Messick, C.; Metzdorff, R.; Meyers, P. M.; Mezzani, F.; Miao, H.; Michel, C.; Middleton, H.; E Mikhailov, E.; Milano, L.; Miller, A. L.; Miller, A.; Miller, B. B.; Miller, J.; Millhouse, M.; Minenkov, Y.; Ming, J.; Mirshekari, S.; Mishra, C.; Mitra, S.; Mitrofanov, V. P.; Mitselmakher, G.; Mittleman, R.; Moggi, A.; Mohan, M.; Mohapatra, S. R. P.; Montani, M.; Moore, B. C.; Moore, C. J.; Moraru, D.; Moreno, G.; Morriss, S. R.; Mours, B.; Mow-Lowry, C. M.; Mueller, G.; Muir, A. W.; Mukherjee, Arunava; Mukherjee, D.; Mukherjee, S.; Mukund, N.; Mullavey, A.; Munch, J.; Muniz, E. A. M.; Murray, P. G.; Mytidis, A.; Napier, K.; Nardecchia, I.; Naticchioni, L.; Nelemans, G.; Nelson, T. J. N.; Neri, M.; Nery, M.; Neunzert, A.; Newport, J. M.; Newton, G.; Nguyen, T. T.; Nielsen, A. B.; Nissanke, S.; Nitz, A.; Noack, A.; Nocera, F.; Nolting, D.; Normandin, M. E. N.; Nuttall, L. K.; Oberling, J.; Ochsner, E.; Oelker, E.; Ogin, G. H.; Oh, J. J.; Oh, S. H.; Ohme, F.; Oliver, M.; Oppermann, P.; Oram, Richard J.; O'Reilly, B.; O'Shaughnessy, R.; Ottaway, D. J.; Overmier, H.; Owen, B. J.; E Pace, A.; Page, J.; Pai, A.; Pai, S. A.; Palamos, J. R.; Palashov, O.; Palomba, C.; Pal-Singh, A.; Pan, H.; Pankow, C.; Pannarale, F.; Pant, B. C.; Paoletti, F.; Paoli, A.; Papa, M. A.; Paris, H. R.; Parker, W.; Pascucci, D.; Pasqualetti, A.; Passaquieti, R.; Passuello, D.; Patricelli, B.; Pearlstone, B. L.; Pedraza, M.; Pedurand, R.; Pekowsky, L.; Pele, A.; Penn, S.; Perez, C. J.; Perreca, A.; Perri, L. M.; Pfeiffer, H. P.; Phelps, M.; Piccinni, O. J.; Pichot, M.; Piergiovanni, F.; Pierro, V.; Pillant, G.; Pinard, L.; Pinto, I. M.; Pitkin, M.; Poe, M.; Poggiani, R.; Popolizio, P.; Post, A.; Powell, J.; Prasad, J.; Pratt, J. W. W.; Predoi, V.; Prestegard, T.; Prijatelj, M.; Principe, M.; Privitera, S.; Prodi, G. A.; Prokhorov, L. G.; Puncken, O.; Punturo, M.; Puppo, P.; Pürrer, M.; Qi, H.; Qin, J.; Qiu, S.; Quetschke, V.; Quintero, E. A.; Quitzow-James, R.; Raab, F. J.; Rabeling, D. S.; Radkins, H.; Raffai, P.; Raja, S.; Rajan, C.; Rakhmanov, M.; Rapagnani, P.; Raymond, V.; Razzano, M.; Re, V.; Read, J.; Regimbau, T.; Rei, L.; Reid, S.; Reitze, D. H.; Rew, H.; Reyes, S. D.; Rhoades, E.; Ricci, F.; Riles, K.; Rizzo, M.; Robertson, N. A.; Robie, R.; Robinet, F.; Rocchi, A.; Rolland, L.; Rollins, J. G.; Roma, V. J.; Romano, J. D.; Romano, R.; Romie, J. H.; Rosińska, D.; Rowan, S.; Rüdiger, A.; Ruggi, P.; Ryan, K.; Sachdev, S.; Sadecki, T.; Sadeghian, L.; Sakellariadou, M.; Salconi, L.; Saleem, M.; Salemi, F.; Samajdar, A.; Sammut, L.; Sampson, L. M.; Sanchez, E. J.; Sandberg, V.; Sanders, J. R.; Sassolas, B.; Sathyaprakash, B. S.; Saulson, P. R.; Sauter, O.; Savage, R. L.; Sawadsky, A.; Schale, P.; Scheuer, J.; Schmidt, E.; Schmidt, J.; Schmidt, P.; Schnabel, R.; Schofield, R. M. S.; Schönbeck, A.; Schreiber, E.; Schuette, D.; Schutz, B. F.; Schwalbe, S. G.; Scott, J.; Scott, S. M.; Sellers, D.; Sengupta, A. S.; Sentenac, D.; Sequino, V.; Sergeev, A.; Setyawati, Y.; Shaddock, D. A.; Shaffer, T. J.; Shahriar, M. S.; Shapiro, B.; Shawhan, P.; Sheperd, A.; Shoemaker, D. H.; Shoemaker, D. M.; Siellez, K.; Siemens, X.; Sieniawska, M.; Sigg, D.; Silva, A. D.; Singer, A.; Singer, L. P.; Singh, A.; Singh, R.; Singhal, A.; Sintes, A. M.; Slagmolen, B. J. J.; Smith, B.; Smith, J. R.; E Smith, R. J.; Son, E. J.; Sorazu, B.; Sorrentino, F.; Souradeep, T.; Spencer, A. P.; Srivastava, A. K.; Staley, A.; Steinke, M.; Steinlechner, J.; Steinlechner, S.; Steinmeyer, D.; Stephens, B. C.; Stevenson, S. P.; Stone, R.; Strain, K. A.; Straniero, N.; Stratta, G.; E Strigin, S.; Sturani, R.; Stuver, A. L.; Summerscales, T. Z.; Sun, L.; Sunil, S.; Sutton, P. J.; Swinkels, B. L.; Szczepańczyk, M. J.; Tacca, M.; Talukder, D.; Tanner, D. B.; Tápai, M.; Taracchini, A.; Taylor, R.; Theeg, T.; Thomas, E. G.; Thomas, M.; Thomas, P.; Thorne, K. A.; Thrane, E.; Tippens, T.; Tiwari, S.; Tiwari, V.; Tokmakov, K. V.; Toland, K.; Tomlinson, C.; Tonelli, M.; Tornasi, Z.; Torrie, C. I.; Töyrä, D.; Travasso, F.; Traylor, G.; Trifirò, D.; Trinastic, J.; Tringali, M. C.; Trozzo, L.; Tse, M.; Tso, R.; Turconi, M.; Tuyenbayev, D.; Ugolini, D.; Unnikrishnan, C. S.; Urban, A. L.; Usman, S. A.; Vahlbruch, H.; Vajente, G.; Valdes, G.; van Bakel, N.; van Beuzekom, M.; van den Brand, J. F. J.; Van Den Broeck, C.; Vander-Hyde, D. C.; van der Schaaf, L.; van Heijningen, J. V.; van Veggel, A. A.; Vardaro, M.; Varma, V.; Vass, S.; Vasúth, M.; Vecchio, A.; Vedovato, G.; Veitch, J.; Veitch, P. J.; Venkateswara, K.; Venugopalan, G.; Verkindt, D.; Vetrano, F.; Viceré, A.; Viets, A. D.; Vinciguerra, S.; Vine, D. J.; Vinet, J.-Y.; Vitale, S.; Vo, T.; Vocca, H.; Vorvick, C.; Voss, D. V.; Vousden, W. D.; Vyatchanin, S. P.; Wade, A. R.; E Wade, L.; Wade, M.; Walker, M.; Wallace, L.; Walsh, S.; Wang, G.; Wang, H.; Wang, M.; Wang, Y.; Ward, R. L.; Warner, J.; Was, M.; Watchi, J.; Weaver, B.; Wei, L.-W.; Weinert, M.; Weinstein, A. J.; Weiss, R.; Wen, L.; Weßels, P.; Westphal, T.; Wette, K.; Whelan, J. T.; Whiting, B. F.; Whittle, C.; Williams, D.; Williams, R. D.; Williamson, A. R.; Willis, J. L.; Willke, B.; Wimmer, M. H.; Winkler, W.; Wipf, C. C.; Wittel, H.; Woan, G.; Woehler, J.; Worden, J.; Wright, J. L.; Wu, D. S.; Wu, G.; Yam, W.; Yamamoto, H.; Yancey, C. C.; Yap, M. J.; Yu, Hang; Yu, Haocun; Yvert, M.; Zadrożny, A.; Zangrando, L.; Zanolin, M.; Zendri, J.-P.; Zevin, M.; Zhang, L.; Zhang, M.; Zhang, T.; Zhang, Y.; Zhao, C.; Zhou, M.; Zhou, Z.; Zhu, S. J.; Zhu, X. J.; E Zucker, M.; Zweizig, J.; LIGO Scientific Collaboration; Virgo Collaboration; Boyle, M.; Chu, T.; Hemberger, D.; Hinder, I.; E Kidder, L.; Ossokine, S.; Scheel, M.; Szilagyi, B.; Teukolsky, S.; Vano Vinuales, A.

    2017-05-01

    Parameter estimates of GW150914 were obtained using Bayesian inference, based on three semi-analytic waveform models for binary black hole coalescences. These waveform models differ from each other in their treatment of black hole spins, and all three models make some simplifying assumptions, notably to neglect sub-dominant waveform harmonic modes and orbital eccentricity. Furthermore, while the models are calibrated to agree with waveforms obtained by full numerical solutions of Einstein’s equations, any such calibration is accurate only to some non-zero tolerance and is limited by the accuracy of the underlying phenomenology, availability, quality, and parameter-space coverage of numerical simulations. This paper complements the original analyses of GW150914 with an investigation of the effects of possible systematic errors in the waveform models on estimates of its source parameters. To test for systematic errors we repeat the original Bayesian analysis on mock signals from numerical simulations of a series of binary configurations with parameters similar to those found for GW150914. Overall, we find no evidence for a systematic bias relative to the statistical error of the original parameter recovery of GW150914 due to modeling approximations or modeling inaccuracies. However, parameter biases are found to occur for some configurations disfavored by the data of GW150914: for binaries inclined edge-on to the detector over a small range of choices of polarization angles, and also for eccentricities greater than  ˜0.05. For signals with higher signal-to-noise ratio than GW150914, or in other regions of the binary parameter space (lower masses, larger mass ratios, or higher spins), we expect that systematic errors in current waveform models may impact gravitational-wave measurements, making more accurate models desirable for future observations.

  13. De-biasing the dynamic mode decomposition for applied Koopman spectral analysis of noisy datasets

    NASA Astrophysics Data System (ADS)

    Hemati, Maziar S.; Rowley, Clarence W.; Deem, Eric A.; Cattafesta, Louis N.

    2017-08-01

    The dynamic mode decomposition (DMD)—a popular method for performing data-driven Koopman spectral analysis—has gained increased popularity for extracting dynamically meaningful spatiotemporal descriptions of fluid flows from snapshot measurements. Often times, DMD descriptions can be used for predictive purposes as well, which enables informed decision-making based on DMD model forecasts. Despite its widespread use and utility, DMD can fail to yield accurate dynamical descriptions when the measured snapshot data are imprecise due to, e.g., sensor noise. Here, we express DMD as a two-stage algorithm in order to isolate a source of systematic error. We show that DMD's first stage, a subspace projection step, systematically introduces bias errors by processing snapshots asymmetrically. To remove this systematic error, we propose utilizing an augmented snapshot matrix in a subspace projection step, as in problems of total least-squares, in order to account for the error present in all snapshots. The resulting unbiased and noise-aware total DMD (TDMD) formulation reduces to standard DMD in the absence of snapshot errors, while the two-stage perspective generalizes the de-biasing framework to other related methods as well. TDMD's performance is demonstrated in numerical and experimental fluids examples. In particular, in the analysis of time-resolved particle image velocimetry data for a separated flow, TDMD outperforms standard DMD by providing dynamical interpretations that are consistent with alternative analysis techniques. Further, TDMD extracts modes that reveal detailed spatial structures missed by standard DMD.

  14. Influence of ECG measurement accuracy on ECG diagnostic statements.

    PubMed

    Zywietz, C; Celikag, D; Joseph, G

    1996-01-01

    Computer analysis of electrocardiograms (ECGs) provides a large amount of ECG measurement data, which may be used for diagnostic classification and storage in ECG databases. Until now, neither error limits for ECG measurements have been specified nor has their influence on diagnostic statements been systematically investigated. An analytical method is presented to estimate the influence of measurement errors on the accuracy of diagnostic ECG statements. Systematic (offset) errors will usually result in an increase of false positive or false negative statements since they cause a shift of the working point on the receiver operating characteristics curve. Measurement error dispersion broadens the distribution function of discriminative measurement parameters and, therefore, usually increases the overlap between discriminative parameters. This results in a flattening of the receiver operating characteristics curve and an increase of false positive and false negative classifications. The method developed has been applied to ECG conduction defect diagnoses by using the proposed International Electrotechnical Commission's interval measurement tolerance limits. These limits appear too large because more than 30% of false positive atrial conduction defect statements and 10-18% of false intraventricular conduction defect statements could be expected due to tolerated measurement errors. To assure long-term usability of ECG measurement databases, it is recommended that systems provide its error tolerance limits obtained on a defined test set.

  15. More on Systematic Error in a Boyle's Law Experiment

    ERIC Educational Resources Information Center

    McCall, Richard P.

    2012-01-01

    A recent article in "The Physics Teacher" describes a method for analyzing a systematic error in a Boyle's law laboratory activity. Systematic errors are important to consider in physics labs because they tend to bias the results of measurements. There are numerous laboratory examples and resources that discuss this common source of error.

  16. Orbital-free bond breaking via machine learning

    NASA Astrophysics Data System (ADS)

    Snyder, John C.; Rupp, Matthias; Hansen, Katja; Blooston, Leo; Müller, Klaus-Robert; Burke, Kieron

    2013-12-01

    Using a one-dimensional model, we explore the ability of machine learning to approximate the non-interacting kinetic energy density functional of diatomics. This nonlinear interpolation between Kohn-Sham reference calculations can (i) accurately dissociate a diatomic, (ii) be systematically improved with increased reference data and (iii) generate accurate self-consistent densities via a projection method that avoids directions with no data. With relatively few densities, the error due to the interpolation is smaller than typical errors in standard exchange-correlation functionals.

  17. REMOVED: Risk-taking and self-regulation: A systematic review of the analysis of delinquency outcomes in the juvenile justice intervention literature 1996-2009.

    PubMed

    Evans-Chase, Michelle; Kim, Minseop; Zhou, Huiquan

    2015-12-01

    This article has been removed: please see Elsevier Policy on Article Withdrawal (https://www.elsevier.com/about/our-business/policies/article-withdrawal) This meeting abstract has been removed by the Publisher. Due to an administrative error, abstracts that were not presented at the ISDN 2014 meeting were inadvertently published in the meeting's abstract supplement. The Publisher apologizes to the authors and readers for this error. Copyright © 2015. Published by Elsevier Ltd.

  18. Causal Inference for fMRI Time Series Data with Systematic Errors of Measurement in a Balanced On/Off Study of Social Evaluative Threat.

    PubMed

    Sobel, Michael E; Lindquist, Martin A

    2014-07-01

    Functional magnetic resonance imaging (fMRI) has facilitated major advances in understanding human brain function. Neuroscientists are interested in using fMRI to study the effects of external stimuli on brain activity and causal relationships among brain regions, but have not stated what is meant by causation or defined the effects they purport to estimate. Building on Rubin's causal model, we construct a framework for causal inference using blood oxygenation level dependent (BOLD) fMRI time series data. In the usual statistical literature on causal inference, potential outcomes, assumed to be measured without systematic error, are used to define unit and average causal effects. However, in general the potential BOLD responses are measured with stimulus dependent systematic error. Thus we define unit and average causal effects that are free of systematic error. In contrast to the usual case of a randomized experiment where adjustment for intermediate outcomes leads to biased estimates of treatment effects (Rosenbaum, 1984), here the failure to adjust for task dependent systematic error leads to biased estimates. We therefore adjust for systematic error using measured "noise covariates" , using a linear mixed model to estimate the effects and the systematic error. Our results are important for neuroscientists, who typically do not adjust for systematic error. They should also prove useful to researchers in other areas where responses are measured with error and in fields where large amounts of data are collected on relatively few subjects. To illustrate our approach, we re-analyze data from a social evaluative threat task, comparing the findings with results that ignore systematic error.

  19. Technical Note: Introduction of variance component analysis to setup error analysis in radiotherapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Matsuo, Yukinori, E-mail: ymatsuo@kuhp.kyoto-u.ac.

    Purpose: The purpose of this technical note is to introduce variance component analysis to the estimation of systematic and random components in setup error of radiotherapy. Methods: Balanced data according to the one-factor random effect model were assumed. Results: Analysis-of-variance (ANOVA)-based computation was applied to estimate the values and their confidence intervals (CIs) for systematic and random errors and the population mean of setup errors. The conventional method overestimates systematic error, especially in hypofractionated settings. The CI for systematic error becomes much wider than that for random error. The ANOVA-based estimation can be extended to a multifactor model considering multiplemore » causes of setup errors (e.g., interpatient, interfraction, and intrafraction). Conclusions: Variance component analysis may lead to novel applications to setup error analysis in radiotherapy.« less

  20. Eddy-covariance data with low signal-to-noise ratio: time-lag determination, uncertainties and limit of detection

    NASA Astrophysics Data System (ADS)

    Langford, B.; Acton, W.; Ammann, C.; Valach, A.; Nemitz, E.

    2015-10-01

    All eddy-covariance flux measurements are associated with random uncertainties which are a combination of sampling error due to natural variability in turbulence and sensor noise. The former is the principal error for systems where the signal-to-noise ratio of the analyser is high, as is usually the case when measuring fluxes of heat, CO2 or H2O. Where signal is limited, which is often the case for measurements of other trace gases and aerosols, instrument uncertainties dominate. Here, we are applying a consistent approach based on auto- and cross-covariance functions to quantify the total random flux error and the random error due to instrument noise separately. As with previous approaches, the random error quantification assumes that the time lag between wind and concentration measurement is known. However, if combined with commonly used automated methods that identify the individual time lag by looking for the maximum in the cross-covariance function of the two entities, analyser noise additionally leads to a systematic bias in the fluxes. Combining data sets from several analysers and using simulations, we show that the method of time-lag determination becomes increasingly important as the magnitude of the instrument error approaches that of the sampling error. The flux bias can be particularly significant for disjunct data, whereas using a prescribed time lag eliminates these effects (provided the time lag does not fluctuate unduly over time). We also demonstrate that when sampling at higher elevations, where low frequency turbulence dominates and covariance peaks are broader, both the probability and magnitude of bias are magnified. We show that the statistical significance of noisy flux data can be increased (limit of detection can be decreased) by appropriate averaging of individual fluxes, but only if systematic biases are avoided by using a prescribed time lag. Finally, we make recommendations for the analysis and reporting of data with low signal-to-noise and their associated errors.

  1. Eddy-covariance data with low signal-to-noise ratio: time-lag determination, uncertainties and limit of detection

    NASA Astrophysics Data System (ADS)

    Langford, B.; Acton, W.; Ammann, C.; Valach, A.; Nemitz, E.

    2015-03-01

    All eddy-covariance flux measurements are associated with random uncertainties which are a combination of sampling error due to natural variability in turbulence and sensor noise. The former is the principal error for systems where the signal-to-noise ratio of the analyser is high, as is usually the case when measuring fluxes of heat, CO2 or H2O. Where signal is limited, which is often the case for measurements of other trace gases and aerosols, instrument uncertainties dominate. We are here applying a consistent approach based on auto- and cross-covariance functions to quantifying the total random flux error and the random error due to instrument noise separately. As with previous approaches, the random error quantification assumes that the time-lag between wind and concentration measurement is known. However, if combined with commonly used automated methods that identify the individual time-lag by looking for the maximum in the cross-covariance function of the two entities, analyser noise additionally leads to a systematic bias in the fluxes. Combining datasets from several analysers and using simulations we show that the method of time-lag determination becomes increasingly important as the magnitude of the instrument error approaches that of the sampling error. The flux bias can be particularly significant for disjunct data, whereas using a prescribed time-lag eliminates these effects (provided the time-lag does not fluctuate unduly over time). We also demonstrate that when sampling at higher elevations, where low frequency turbulence dominates and covariance peaks are broader, both the probability and magnitude of bias are magnified. We show that the statistical significance of noisy flux data can be increased (limit of detection can be decreased) by appropriate averaging of individual fluxes, but only if systematic biases are avoided by using a prescribed time-lag. Finally, we make recommendations for the analysis and reporting of data with low signal-to-noise and their associated errors.

  2. Geographically correlated errors observed from a laser-based short-arc technique

    NASA Astrophysics Data System (ADS)

    Bonnefond, P.; Exertier, P.; Barlier, F.

    1999-07-01

    The laser-based short-arc technique has been developed in order to avoid local errors which affect the dynamical orbit computation, such as those due to mismodeling in the geopotential. It is based on a geometric method and consists in fitting short arcs (about 4000 km), issued from a global orbit, with satellite laser ranging tracking measurements from a ground station network. Ninety-two TOPEX/Poseidon (T/P) cycles of laser-based short-arc orbits have then been compared to JGM-2 and JGM-3 T/P orbits computed by the Precise Orbit Determination (POD) teams (Service d'Orbitographie Doris/Centre National d'Etudes Spatiales and Goddard Space Flight Center/NASA) over two areas: (1) the Mediterranean area and (2) a part of the Pacific (including California and Hawaii) called hereafter the U.S. area. Geographically correlated orbit errors in these areas are clearly evidenced: for example, -2.6 cm and +0.7 cm for the Mediterranean and U.S. areas, respectively, relative to JGM-3 orbits. However, geographically correlated errors (GCE) which are commonly linked to errors in the gravity model, can also be due to systematic errors in the reference frame and/or to biases in the tracking measurements. The short-arc technique being very sensitive to such error sources, our analysis however demonstrates that the induced geographical systematic effects are at the level of 1-2 cm on the radial orbit component. Results are also compared with those obtained with the GPS-based reduced dynamic technique. The time-dependent part of GCE has also been studied. Over 6 years of T/P data, coherent signals in the radial component of T/P Precise Orbit Ephemeris (POE) are clearly evidenced with a time period of about 6 months. In addition, impact of time varying-error sources coming from the reference frame and the tracking data accuracy has been analyzed, showing a possible linear trend of about 0.5-1 mm/yr in the radial component of T/P POE.

  3. Assessment of the accuracy of global geodetic satellite laser ranging observations and estimated impact on ITRF scale: estimation of systematic errors in LAGEOS observations 1993-2014

    NASA Astrophysics Data System (ADS)

    Appleby, Graham; Rodríguez, José; Altamimi, Zuheir

    2016-12-01

    Satellite laser ranging (SLR) to the geodetic satellites LAGEOS and LAGEOS-2 uniquely determines the origin of the terrestrial reference frame and, jointly with very long baseline interferometry, its scale. Given such a fundamental role in satellite geodesy, it is crucial that any systematic errors in either technique are at an absolute minimum as efforts continue to realise the reference frame at millimetre levels of accuracy to meet the present and future science requirements. Here, we examine the intrinsic accuracy of SLR measurements made by tracking stations of the International Laser Ranging Service using normal point observations of the two LAGEOS satellites in the period 1993 to 2014. The approach we investigate in this paper is to compute weekly reference frame solutions solving for satellite initial state vectors, station coordinates and daily Earth orientation parameters, estimating along with these weekly average range errors for each and every one of the observing stations. Potential issues in any of the large number of SLR stations assumed to have been free of error in previous realisations of the ITRF may have been absorbed in the reference frame, primarily in station height. Likewise, systematic range errors estimated against a fixed frame that may itself suffer from accuracy issues will absorb network-wide problems into station-specific results. Our results suggest that in the past two decades, the scale of the ITRF derived from the SLR technique has been close to 0.7 ppb too small, due to systematic errors either or both in the range measurements and their treatment. We discuss these results in the context of preparations for ITRF2014 and additionally consider the impact of this work on the currently adopted value of the geocentric gravitational constant, GM.

  4. Categorical Biases in Spatial Memory: The Role of Certainty

    ERIC Educational Resources Information Center

    Holden, Mark P.; Newcombe, Nora S.; Shipley, Thomas F.

    2015-01-01

    Memories for spatial locations often show systematic errors toward the central value of the surrounding region. The Category Adjustment (CA) model suggests that this bias is due to a Bayesian combination of categorical and metric information, which offers an optimal solution under conditions of uncertainty (Huttenlocher, Hedges, & Duncan,…

  5. Effect of patient setup errors on simultaneously integrated boost head and neck IMRT treatment plans

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Siebers, Jeffrey V.; Keall, Paul J.; Wu Qiuwen

    2005-10-01

    Purpose: The purpose of this study is to determine dose delivery errors that could result from random and systematic setup errors for head-and-neck patients treated using the simultaneous integrated boost (SIB)-intensity-modulated radiation therapy (IMRT) technique. Methods and Materials: Twenty-four patients who participated in an intramural Phase I/II parotid-sparing IMRT dose-escalation protocol using the SIB treatment technique had their dose distributions reevaluated to assess the impact of random and systematic setup errors. The dosimetric effect of random setup error was simulated by convolving the two-dimensional fluence distribution of each beam with the random setup error probability density distribution. Random setup errorsmore » of {sigma} = 1, 3, and 5 mm were simulated. Systematic setup errors were simulated by randomly shifting the patient isocenter along each of the three Cartesian axes, with each shift selected from a normal distribution. Systematic setup error distributions with {sigma} = 1.5 and 3.0 mm along each axis were simulated. Combined systematic and random setup errors were simulated for {sigma} = {sigma} = 1.5 and 3.0 mm along each axis. For each dose calculation, the gross tumor volume (GTV) received by 98% of the volume (D{sub 98}), clinical target volume (CTV) D{sub 90}, nodes D{sub 90}, cord D{sub 2}, and parotid D{sub 50} and parotid mean dose were evaluated with respect to the plan used for treatment for the structure dose and for an effective planning target volume (PTV) with a 3-mm margin. Results: Simultaneous integrated boost-IMRT head-and-neck treatment plans were found to be less sensitive to random setup errors than to systematic setup errors. For random-only errors, errors exceeded 3% only when the random setup error {sigma} exceeded 3 mm. Simulated systematic setup errors with {sigma} = 1.5 mm resulted in approximately 10% of plan having more than a 3% dose error, whereas a {sigma} = 3.0 mm resulted in half of the plans having more than a 3% dose error and 28% with a 5% dose error. Combined random and systematic dose errors with {sigma} = {sigma} = 3.0 mm resulted in more than 50% of plans having at least a 3% dose error and 38% of the plans having at least a 5% dose error. Evaluation with respect to a 3-mm expanded PTV reduced the observed dose deviations greater than 5% for the {sigma} = {sigma} = 3.0 mm simulations to 5.4% of the plans simulated. Conclusions: Head-and-neck SIB-IMRT dosimetric accuracy would benefit from methods to reduce patient systematic setup errors. When GTV, CTV, or nodal volumes are used for dose evaluation, plans simulated including the effects of random and systematic errors deviate substantially from the nominal plan. The use of PTVs for dose evaluation in the nominal plan improves agreement with evaluated GTV, CTV, and nodal dose values under simulated setup errors. PTV concepts should be used for SIB-IMRT head-and-neck squamous cell carcinoma patients, although the size of the margins may be less than those used with three-dimensional conformal radiation therapy.« less

  6. High Precision Metrology on the Ultra-Lightweight W 50.8 cm f/1.25 Parabolic SHARPI Primary Mirror using a CGH Null Lens

    NASA Technical Reports Server (NTRS)

    Antonille, Scott

    2004-01-01

    For potential use on the SHARPI mission, Eastman Kodak has delivered a 50.8cm CA f/1.25 ultra-lightweight UV parabolic mirror with a surface figure error requirement of 6nm RMS. We address the challenges involved in verifying and mapping the surface error of this large lightweight mirror to +/-3nm using a diffractive CGH null lens. Of main concern is removal of large systematic errors resulting from surface deflections of the mirror due to gravity as well as smaller contributions from system misalignment and reference optic errors. We present our efforts to characterize these errors and remove their wavefront error contribution in post-processing as well as minimizing the uncertainty these calculations introduce. Data from Kodak and preliminary measurements from NASA Goddard will be included.

  7. Efficient Solar Scene Wavefront Estimation with Reduced Systematic and RMS Errors: Summary

    NASA Astrophysics Data System (ADS)

    Anugu, N.; Garcia, P.

    2016-04-01

    Wave front sensing for solar telescopes is commonly implemented with the Shack-Hartmann sensors. Correlation algorithms are usually used to estimate the extended scene Shack-Hartmann sub-aperture image shifts or slopes. The image shift is computed by correlating a reference sub-aperture image with the target distorted sub-aperture image. The pixel position where the maximum correlation is located gives the image shift in integer pixel coordinates. Sub-pixel precision image shifts are computed by applying a peak-finding algorithm to the correlation peak Poyneer (2003); Löfdahl (2010). However, the peak-finding algorithm results are usually biased towards the integer pixels, these errors are called as systematic bias errors Sjödahl (1994). These errors are caused due to the low pixel sampling of the images. The amplitude of these errors depends on the type of correlation algorithm and the type of peak-finding algorithm being used. To study the systematic errors in detail, solar sub-aperture synthetic images are constructed by using a Swedish Solar Telescope solar granulation image1. The performance of cross-correlation algorithm in combination with different peak-finding algorithms is investigated. The studied peak-finding algorithms are: parabola Poyneer (2003); quadratic polynomial Löfdahl (2010); threshold center of gravity Bailey (2003); Gaussian Nobach & Honkanen (2005) and Pyramid Bailey (2003). The systematic error study reveals that that the pyramid fit is the most robust to pixel locking effects. The RMS error analysis study reveals that the threshold centre of gravity behaves better in low SNR, although the systematic errors in the measurement are large. It is found that no algorithm is best for both the systematic and the RMS error reduction. To overcome the above problem, a new solution is proposed. In this solution, the image sampling is increased prior to the actual correlation matching. The method is realized in two steps to improve its computational efficiency. In the first step, the cross-correlation is implemented at the original image spatial resolution grid (1 pixel). In the second step, the cross-correlation is performed using a sub-pixel level grid by limiting the field of search to 4 × 4 pixels centered at the first step delivered initial position. The generation of these sub-pixel grid based region of interest images is achieved with the bi-cubic interpolation. The correlation matching with sub-pixel grid technique was previously reported in electronic speckle photography Sjö'dahl (1994). This technique is applied here for the solar wavefront sensing. A large dynamic range and a better accuracy in the measurements are achieved with the combination of the original pixel grid based correlation matching in a large field of view and a sub-pixel interpolated image grid based correlation matching within a small field of view. The results revealed that the proposed method outperforms all the different peak-finding algorithms studied in the first approach. It reduces both the systematic error and the RMS error by a factor of 5 (i.e., 75% systematic error reduction), when 5 times improved image sampling was used. This measurement is achieved at the expense of twice the computational cost. With the 5 times improved image sampling, the wave front accuracy is increased by a factor of 5. The proposed solution is strongly recommended for wave front sensing in the solar telescopes, particularly, for measuring large dynamic image shifts involved open loop adaptive optics. Also, by choosing an appropriate increment of image sampling in trade-off between the computational speed limitation and the aimed sub-pixel image shift accuracy, it can be employed in closed loop adaptive optics. The study is extended to three other class of sub-aperture images (a point source; a laser guide star; a Galactic Center extended scene). The results are planned to submit for the Optical Express journal.

  8. The sensitivity of patient specific IMRT QC to systematic MLC leaf bank offset errors.

    PubMed

    Rangel, Alejandra; Palte, Gesa; Dunscombe, Peter

    2010-07-01

    Patient specific IMRT QC is performed routinely in many clinics as a safeguard against errors and inaccuracies which may be introduced during the complex planning, data transfer, and delivery phases of this type of treatment. The purpose of this work is to evaluate the feasibility of detecting systematic errors in MLC leaf bank position with patient specific checks. 9 head and neck (H&N) and 14 prostate IMRT beams were delivered using MLC files containing systematic offsets (+/- 1 mm in two banks, +/- 0.5 mm in two banks, and 1 mm in one bank of leaves). The beams were measured using both MAPCHECK (Sun Nuclear Corp., Melbourne, FL) and the aS1000 electronic portal imaging device (Varian Medical Systems, Palo Alto, CA). Comparisons with calculated fields, without offsets, were made using commonly adopted criteria including absolute dose (AD) difference, relative dose difference, distance to agreement (DTA), and the gamma index. The criteria most sensitive to systematic leaf bank offsets were the 3% AD, 3 mm DTA for MAPCHECK and the gamma index with 2% AD and 2 mm DTA for the EPID. The criterion based on the relative dose measurements was the least sensitive to MLC offsets. More highly modulated fields, i.e., H&N, showed greater changes in the percentage of passing points due to systematic MLC inaccuracy than prostate fields. None of the techniques or criteria tested is sufficiently sensitive, with the population of IMRT fields, to detect a systematic MLC offset at a clinically significant level on an individual field. Patient specific QC cannot, therefore, substitute for routine QC of the MLC itself.

  9. First Year Wilkinson Microwave Anisotropy Probe(WMAP) Observations: Data Processing Methods and Systematic Errors Limits

    NASA Technical Reports Server (NTRS)

    Hinshaw, G.; Barnes, C.; Bennett, C. L.; Greason, M. R.; Halpern, M.; Hill, R. S.; Jarosik, N.; Kogut, A.; Limon, M.; Meyer, S. S.

    2003-01-01

    We describe the calibration and data processing methods used to generate full-sky maps of the cosmic microwave background (CMB) from the first year of Wilkinson Microwave Anisotropy Probe (WMAP) observations. Detailed limits on residual systematic errors are assigned based largely on analyses of the flight data supplemented, where necessary, with results from ground tests. The data are calibrated in flight using the dipole modulation of the CMB due to the observatory's motion around the Sun. This constitutes a full-beam calibration source. An iterative algorithm simultaneously fits the time-ordered data to obtain calibration parameters and pixelized sky map temperatures. The noise properties are determined by analyzing the time-ordered data with this sky signal estimate subtracted. Based on this, we apply a pre-whitening filter to the time-ordered data to remove a low level of l/f noise. We infer and correct for a small (approx. 1 %) transmission imbalance between the two sky inputs to each differential radiometer, and we subtract a small sidelobe correction from the 23 GHz (K band) map prior to further analysis. No other systematic error corrections are applied to the data. Calibration and baseline artifacts, including the response to environmental perturbations, are negligible. Systematic uncertainties are comparable to statistical uncertainties in the characterization of the beam response. Both are accounted for in the covariance matrix of the window function and are propagated to uncertainties in the final power spectrum. We characterize the combined upper limits to residual systematic uncertainties through the pixel covariance matrix.

  10. Presearch data conditioning in the Kepler Science Operations Center pipeline

    NASA Astrophysics Data System (ADS)

    Twicken, Joseph D.; Chandrasekaran, Hema; Jenkins, Jon M.; Gunter, Jay P.; Girouard, Forrest; Klaus, Todd C.

    2010-07-01

    We describe the Presearch Data Conditioning (PDC) software component and its context in the Kepler Science Operations Center (SOC) Science Processing Pipeline. The primary tasks of this component are to correct systematic and other errors, remove excess flux due to aperture crowding, and condition the raw flux light curves for over 160,000 long cadence (~thirty minute) and 512 short cadence (~one minute) stellar targets. Long cadence corrected flux light curves are subjected to a transiting planet search in a subsequent pipeline module. We discuss science algorithms for long and short cadence PDC: identification and correction of unexplained (i.e., unrelated to known anomalies) discontinuities; systematic error correction; and removal of excess flux due to aperture crowding. We discuss the propagation of uncertainties from raw to corrected flux. Finally, we present examples from Kepler flight data to illustrate PDC performance. Corrected flux light curves produced by PDC are exported to the Multi-mission Archive at Space Telescope [Science Institute] (MAST) and are made available to the general public in accordance with the NASA/Kepler data release policy.

  11. Errors in causal inference: an organizational schema for systematic error and random error.

    PubMed

    Suzuki, Etsuji; Tsuda, Toshihide; Mitsuhashi, Toshiharu; Mansournia, Mohammad Ali; Yamamoto, Eiji

    2016-11-01

    To provide an organizational schema for systematic error and random error in estimating causal measures, aimed at clarifying the concept of errors from the perspective of causal inference. We propose to divide systematic error into structural error and analytic error. With regard to random error, our schema shows its four major sources: nondeterministic counterfactuals, sampling variability, a mechanism that generates exposure events and measurement variability. Structural error is defined from the perspective of counterfactual reasoning and divided into nonexchangeability bias (which comprises confounding bias and selection bias) and measurement bias. Directed acyclic graphs are useful to illustrate this kind of error. Nonexchangeability bias implies a lack of "exchangeability" between the selected exposed and unexposed groups. A lack of exchangeability is not a primary concern of measurement bias, justifying its separation from confounding bias and selection bias. Many forms of analytic errors result from the small-sample properties of the estimator used and vanish asymptotically. Analytic error also results from wrong (misspecified) statistical models and inappropriate statistical methods. Our organizational schema is helpful for understanding the relationship between systematic error and random error from a previously less investigated aspect, enabling us to better understand the relationship between accuracy, validity, and precision. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. Individual pore and interconnection size analysis of macroporous ceramic scaffolds using high-resolution X-ray tomography

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jerban, Saeed, E-mail: saeed.jerban@usherbrooke.ca

    2016-08-15

    The pore interconnection size of β-tricalcium phosphate scaffolds plays an essential role in the bone repair process. Although, the μCT technique is widely used in the biomaterial community, it is rarely used to measure the interconnection size because of the lack of algorithms. In addition, discrete nature of the μCT introduces large systematic errors due to the convex geometry of interconnections. We proposed, verified and validated a novel pore-level algorithm to accurately characterize the individual pores and interconnections. Specifically, pores and interconnections were isolated, labeled, and individually analyzed with high accuracy. The technique was verified thoroughly by visually inspecting andmore » verifying over 3474 properties of randomly selected pores. This extensive verification process has passed a one-percent accuracy criterion. Scanning errors inherent in the discretization, which lead to both dummy and significantly overestimated interconnections, have been examined using computer-based simulations and additional high-resolution scanning. Then accurate correction charts were developed and used to reduce the scanning errors. Only after the corrections, both the μCT and SEM-based results converged, and the novel algorithm was validated. Material scientists with access to all geometrical properties of individual pores and interconnections, using the novel algorithm, will have a more-detailed and accurate description of the substitute architecture and a potentially deeper understanding of the link between the geometric and biological interaction. - Highlights: •An algorithm is developed to analyze individually all pores and interconnections. •After pore isolating, the discretization errors in interconnections were corrected. •Dummy interconnections and overestimated sizes were due to thin material walls. •The isolating algorithm was verified through visual inspection (99% accurate). •After correcting for the systematic errors, algorithm was validated successfully.« less

  13. Experimental test of visuomotor updating models that explain perisaccadic mislocalization.

    PubMed

    Van Wetter, Sigrid M C I; Van Opstal, A John

    2008-10-23

    Localization of a brief visual target is inaccurate when presented around saccade onset. Perisaccadic mislocalization is maximal in the saccade direction and varies systematically with the target-saccade onset disparity. It has been hypothesized that this effect is either due to a sluggish representation of eye position, to low-pass filtering of the visual event, to saccade-induced compression of visual space, or to a combination of these effects. Despite their differences, these schemes all predict that the pattern of localization errors varies systematically with the saccade amplitude and kinematics. We tested these predictions for the double-step paradigm by analyzing the errors for saccades of widely varying amplitudes. Our data show that the measured error patterns are only mildly influenced by the primary-saccade amplitude over a large range of saccade properties. An alternative possibility, better accounting for the data, assumes that around saccade onset perceived target location undergoes a uniform shift in the saccade direction that varies with amplitude only for small saccades. The strength of this visual effect saturates at about 10 deg and also depends on target duration. Hence, we propose that perisaccadic mislocalization results from errors in visual-spatial perception rather than from sluggish oculomotor feedback.

  14. Selecting Statistical Quality Control Procedures for Limiting the Impact of Increases in Analytical Random Error on Patient Safety.

    PubMed

    Yago, Martín

    2017-05-01

    QC planning based on risk management concepts can reduce the probability of harming patients due to an undetected out-of-control error condition. It does this by selecting appropriate QC procedures to decrease the number of erroneous results reported. The selection can be easily made by using published nomograms for simple QC rules when the out-of-control condition results in increased systematic error. However, increases in random error also occur frequently and are difficult to detect, which can result in erroneously reported patient results. A statistical model was used to construct charts for the 1 ks and X /χ 2 rules. The charts relate the increase in the number of unacceptable patient results reported due to an increase in random error with the capability of the measurement procedure. They thus allow for QC planning based on the risk of patient harm due to the reporting of erroneous results. 1 ks Rules are simple, all-around rules. Their ability to deal with increases in within-run imprecision is minimally affected by the possible presence of significant, stable, between-run imprecision. X /χ 2 rules perform better when the number of controls analyzed during each QC event is increased to improve QC performance. Using nomograms simplifies the selection of statistical QC procedures to limit the number of erroneous patient results reported due to an increase in analytical random error. The selection largely depends on the presence or absence of stable between-run imprecision. © 2017 American Association for Clinical Chemistry.

  15. Systematic Error Study for ALICE charged-jet v2 Measurement

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Heinz, M.; Soltz, R.

    We study the treatment of systematic errors in the determination of v 2 for charged jets in √ sNN = 2:76 TeV Pb-Pb collisions by the ALICE Collaboration. Working with the reported values and errors for the 0-5% centrality data we evaluate the Χ 2 according to the formulas given for the statistical and systematic errors, where the latter are separated into correlated and shape contributions. We reproduce both the Χ 2 and p-values relative to a null (zero) result. We then re-cast the systematic errors into an equivalent co-variance matrix and obtain identical results, demonstrating that the two methodsmore » are equivalent.« less

  16. Effect of MLC leaf position, collimator rotation angle, and gantry rotation angle errors on intensity-modulated radiotherapy plans for nasopharyngeal carcinoma

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bai, Sen; Li, Guangjun; Wang, Maojie

    The purpose of this study was to investigate the effect of multileaf collimator (MLC) leaf position, collimator rotation angle, and accelerator gantry rotation angle errors on intensity-modulated radiotherapy plans for nasopharyngeal carcinoma. To compare dosimetric differences between the simulating plans and the clinical plans with evaluation parameters, 6 patients with nasopharyngeal carcinoma were selected for simulation of systematic and random MLC leaf position errors, collimator rotation angle errors, and accelerator gantry rotation angle errors. There was a high sensitivity to dose distribution for systematic MLC leaf position errors in response to field size. When the systematic MLC position errors weremore » 0.5, 1, and 2 mm, respectively, the maximum values of the mean dose deviation, observed in parotid glands, were 4.63%, 8.69%, and 18.32%, respectively. The dosimetric effect was comparatively small for systematic MLC shift errors. For random MLC errors up to 2 mm and collimator and gantry rotation angle errors up to 0.5°, the dosimetric effect was negligible. We suggest that quality control be regularly conducted for MLC leaves, so as to ensure that systematic MLC leaf position errors are within 0.5 mm. Because the dosimetric effect of 0.5° collimator and gantry rotation angle errors is negligible, it can be concluded that setting a proper threshold for allowed errors of collimator and gantry rotation angle may increase treatment efficacy and reduce treatment time.« less

  17. Geodesy by radio interferometry - Effects of atmospheric modeling errors on estimates of baseline length

    NASA Technical Reports Server (NTRS)

    Davis, J. L.; Herring, T. A.; Shapiro, I. I.; Rogers, A. E. E.; Elgered, G.

    1985-01-01

    Analysis of very long baseline interferometry data indicates that systematic errors in prior estimates of baseline length, of order 5 cm for approximately 8000-km baselines, were due primarily to mismodeling of the electrical path length of the troposphere and mesosphere ('atmospheric delay'). Here observational evidence for the existence of such errors in the previously used models for the atmospheric delay is discussed, and a new 'mapping' function for the elevation angle dependence of this delay is developed. The delay predicted by this new mapping function differs from ray trace results by less than approximately 5 mm, at all elevations down to 5 deg elevation, and introduces errors into the estimates of baseline length of less than about 1 cm, for the multistation intercontinental experiment analyzed here.

  18. Short-term Variability of Extinction by Broadband Stellar Photometry

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Musat, I.C.; Ellingson, R.G.

    2005-03-18

    Aerosol optical depth variation over short-term time intervals is determined from broadband observations of stars with a whole sky imager. The main difficulty in such measurements consists of accurately separating the star flux value from the non-stellar diffuse skylight. Using correction method to overcome this difficulty, the monochromatic extinction at the ground due to aerosols is extracted from heterochromatic measurements. A form of closure is achieved by comparison with simultaneous or temporally close measurements with other instruments, and the total error of the method, as a combination of random error of measurements and systematic error of calibration and model, ismore » assessed as being between 2.6 and 3% rms.« less

  19. A Point Kinetics Model for Estimating Neutron Multiplication of Bare Uranium Metal in Tagged Neutron Measurements

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tweardy, Matthew C.; McConchie, Seth; Hayward, Jason P.

    An extension of the point kinetics model is developed in this paper to describe the neutron multiplicity response of a bare uranium object under interrogation by an associated particle imaging deuterium-tritium (D-T) measurement system. This extended model is used to estimate the total neutron multiplication of the uranium. Both MCNPX-PoliMi simulations and data from active interrogation measurements of highly enriched and depleted uranium geometries are used to evaluate the potential of this method and to identify the sources of systematic error. The detection efficiency correction for measured coincidence response is identified as a large source of systematic error. If themore » detection process is not considered, results suggest that the method can estimate total multiplication to within 13% of the simulated value. Values for multiplicity constants in the point kinetics equations are sensitive to enrichment due to (n, xn) interactions by D-T neutrons and can introduce another significant source of systematic bias. This can theoretically be corrected if isotopic composition is known a priori. Finally, the spatial dependence of multiplication is also suspected of introducing further systematic bias for high multiplication uranium objects.« less

  20. A Point Kinetics Model for Estimating Neutron Multiplication of Bare Uranium Metal in Tagged Neutron Measurements

    DOE PAGES

    Tweardy, Matthew C.; McConchie, Seth; Hayward, Jason P.

    2017-06-13

    An extension of the point kinetics model is developed in this paper to describe the neutron multiplicity response of a bare uranium object under interrogation by an associated particle imaging deuterium-tritium (D-T) measurement system. This extended model is used to estimate the total neutron multiplication of the uranium. Both MCNPX-PoliMi simulations and data from active interrogation measurements of highly enriched and depleted uranium geometries are used to evaluate the potential of this method and to identify the sources of systematic error. The detection efficiency correction for measured coincidence response is identified as a large source of systematic error. If themore » detection process is not considered, results suggest that the method can estimate total multiplication to within 13% of the simulated value. Values for multiplicity constants in the point kinetics equations are sensitive to enrichment due to (n, xn) interactions by D-T neutrons and can introduce another significant source of systematic bias. This can theoretically be corrected if isotopic composition is known a priori. Finally, the spatial dependence of multiplication is also suspected of introducing further systematic bias for high multiplication uranium objects.« less

  1. Assessment of Satellite Surface Radiation Products in Highland Regions with Tibet Instrumental Data

    NASA Technical Reports Server (NTRS)

    Yang, Kun; Koike, Toshio; Stackhouse, Paul; Mikovitz, Colleen

    2006-01-01

    This study presents results of comparisons between instrumental radiation data in the elevated Tibetan Plateau and two global satellite products: the Global Energy and Water Cycle Experiment - Surface Radiation Budget (GEWEX-SRB) and International Satellite Cloud Climatology Project - Flux Data (ISCCP-FD). In general, shortwave radiation (SW) is estimated better by ISCCP-FD while longwave radiation (LW) is estimated better by GEWEX-SRB, but all the radiation components in both products are under-estimated. Severe and systematic errors were found in monthly-mean SRB SW (on plateau-average, -48 W/sq m for downward SW and -18 W/sq m for upward SW) and FD LW (on plateau-average, -37 W/sq m for downward LW and -62 W/sq m for upward LW) for radiation. Errors in monthly-mean diurnal variations are even larger than the monthly mean errors. Though the LW errors can be reduced about 10 W/sq m after a correction for altitude difference between the site and SRB and FD grids, these errors are still higher than that for other regions. The large errors in SRB SW was mainly due to a processing mistake for elevation effect, but the errors in SRB LW was mainly due to significant errors in input data. We suggest reprocessing satellite surface radiation budget data, at least for highland areas like Tibet.

  2. Irregular analytical errors in diagnostic testing - a novel concept.

    PubMed

    Vogeser, Michael; Seger, Christoph

    2018-02-23

    In laboratory medicine, routine periodic analyses for internal and external quality control measurements interpreted by statistical methods are mandatory for batch clearance. Data analysis of these process-oriented measurements allows for insight into random analytical variation and systematic calibration bias over time. However, in such a setting, any individual sample is not under individual quality control. The quality control measurements act only at the batch level. Quantitative or qualitative data derived for many effects and interferences associated with an individual diagnostic sample can compromise any analyte. It is obvious that a process for a quality-control-sample-based approach of quality assurance is not sensitive to such errors. To address the potential causes and nature of such analytical interference in individual samples more systematically, we suggest the introduction of a new term called the irregular (individual) analytical error. Practically, this term can be applied in any analytical assay that is traceable to a reference measurement system. For an individual sample an irregular analytical error is defined as an inaccuracy (which is the deviation from a reference measurement procedure result) of a test result that is so high it cannot be explained by measurement uncertainty of the utilized routine assay operating within the accepted limitations of the associated process quality control measurements. The deviation can be defined as the linear combination of the process measurement uncertainty and the method bias for the reference measurement system. Such errors should be coined irregular analytical errors of the individual sample. The measurement result is compromised either by an irregular effect associated with the individual composition (matrix) of the sample or an individual single sample associated processing error in the analytical process. Currently, the availability of reference measurement procedures is still highly limited, but LC-isotope-dilution mass spectrometry methods are increasingly used for pre-market validation of routine diagnostic assays (these tests also involve substantial sets of clinical validation samples). Based on this definition/terminology, we list recognized causes of irregular analytical error as a risk catalog for clinical chemistry in this article. These issues include reproducible individual analytical errors (e.g. caused by anti-reagent antibodies) and non-reproducible, sporadic errors (e.g. errors due to incorrect pipetting volume due to air bubbles in a sample), which can both lead to inaccurate results and risks for patients.

  3. Drought Persistence in Models and Observations

    NASA Astrophysics Data System (ADS)

    Moon, Heewon; Gudmundsson, Lukas; Seneviratne, Sonia

    2017-04-01

    Many regions of the world have experienced drought events that persisted several years and caused substantial economic and ecological impacts in the 20th century. However, it remains unclear whether there are significant trends in the frequency or severity of these prolonged drought events. In particular, an important issue is linked to systematic biases in the representation of persistent drought events in climate models, which impedes analysis related to the detection and attribution of drought trends. This study assesses drought persistence errors in global climate model (GCM) simulations from the 5th phase of Coupled Model Intercomparison Project (CMIP5), in the period of 1901-2010. The model simulations are compared with five gridded observational data products. The analysis focuses on two aspects: the identification of systematic biases in the models and the partitioning of the spread of drought-persistence-error into four possible sources of uncertainty: model uncertainty, observation uncertainty, internal climate variability and the estimation error of drought persistence. We use monthly and yearly dry-to-dry transition probabilities as estimates for drought persistence with drought conditions defined as negative precipitation anomalies. For both time scales we find that most model simulations consistently underestimated drought persistence except in a few regions such as India and Eastern South America. Partitioning the spread of the drought-persistence-error shows that at the monthly time scale model uncertainty and observation uncertainty are dominant, while the contribution from internal variability does play a minor role in most cases. At the yearly scale, the spread of the drought-persistence-error is dominated by the estimation error, indicating that the partitioning is not statistically significant, due to a limited number of considered time steps. These findings reveal systematic errors in the representation of drought persistence in current climate models and highlight the main contributors of uncertainty of drought-persistence-error. Future analyses will focus on investigating the temporal propagation of drought persistence to better understand the causes for the identified errors in the representation of drought persistence in state-of-the-art climate models.

  4. New dimension analyses with error analysis for quaking aspen and black spruce

    NASA Technical Reports Server (NTRS)

    Woods, K. D.; Botkin, D. B.; Feiveson, A. H.

    1987-01-01

    Dimension analysis for black spruce in wetland stands and trembling aspen are reported, including new approaches in error analysis. Biomass estimates for sacrificed trees have standard errors of 1 to 3%; standard errors for leaf areas are 10 to 20%. Bole biomass estimation accounts for most of the error for biomass, while estimation of branch characteristics and area/weight ratios accounts for the leaf area error. Error analysis provides insight for cost effective design of future analyses. Predictive equations for biomass and leaf area, with empirically derived estimators of prediction error, are given. Systematic prediction errors for small aspen trees and for leaf area of spruce from different site-types suggest a need for different predictive models within species. Predictive equations are compared with published equations; significant differences may be due to species responses to regional or site differences. Proportional contributions of component biomass in aspen change in ways related to tree size and stand development. Spruce maintains comparatively constant proportions with size, but shows changes corresponding to site. This suggests greater morphological plasticity of aspen and significance for spruce of nutrient conditions.

  5. Correction for Guessing in the Framework of the 3PL Item Response Theory

    ERIC Educational Resources Information Center

    Chiu, Ting-Wei

    2010-01-01

    Guessing behavior is an important topic with regard to assessing proficiency on multiple choice tests, particularly for examinees at lower levels of proficiency due to greater the potential for systematic error or bias which that inflates observed test scores. Methods that incorporate a correction for guessing on high-stakes tests generally rely…

  6. Assessment of Systematic Chromatic Errors that Impact Sub-1% Photometric Precision in Large-Area Sky Surveys

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, T. S.

    Meeting the science goals for many current and future ground-based optical large-area sky surveys requires that the calibrated broadband photometry is stable in time and uniform over the sky to 1% precision or better. Past surveys have achieved photometric precision of 1-2% by calibrating the survey's stellar photometry with repeated measurements of a large number of stars observed in multiple epochs. The calibration techniques employed by these surveys only consider the relative frame-by-frame photometric zeropoint offset and the focal plane position-dependent illumination corrections, which are independent of the source color. However, variations in the wavelength dependence of the atmospheric transmissionmore » and the instrumental throughput induce source color-dependent systematic errors. These systematic errors must also be considered to achieve the most precise photometric measurements. In this paper, we examine such systematic chromatic errors using photometry from the Dark Energy Survey (DES) as an example. We define a natural magnitude system for DES and calculate the systematic errors on stellar magnitudes, when the atmospheric transmission and instrumental throughput deviate from the natural system. We conclude that the systematic chromatic errors caused by the change of airmass in each exposure, the change of the precipitable water vapor and aerosol in the atmosphere over time, and the non-uniformity of instrumental throughput over the focal plane, can be up to 2% in some bandpasses. We compare the calculated systematic chromatic errors with the observed DES data. For the test sample data, we correct these errors using measurements of the atmospheric transmission and instrumental throughput. The residual after correction is less than 0.3%. We also find that the errors for non-stellar objects are redshift-dependent and can be larger than those for stars at certain redshifts.« less

  7. Application of advanced shearing techniques to the calibration of autocollimators with small angle generators and investigation of error sources.

    PubMed

    Yandayan, T; Geckeler, R D; Aksulu, M; Akgoz, S A; Ozgur, B

    2016-05-01

    The application of advanced error-separating shearing techniques to the precise calibration of autocollimators with Small Angle Generators (SAGs) was carried out for the first time. The experimental realization was achieved using the High Precision Small Angle Generator (HPSAG) of TUBITAK UME under classical dimensional metrology laboratory environmental conditions. The standard uncertainty value of 5 mas (24.2 nrad) reached by classical calibration method was improved to the level of 1.38 mas (6.7 nrad). Shearing techniques, which offer a unique opportunity to separate the errors of devices without recourse to any external standard, were first adapted by Physikalisch-Technische Bundesanstalt (PTB) to the calibration of autocollimators with angle encoders. It has been demonstrated experimentally in a clean room environment using the primary angle standard of PTB (WMT 220). The application of the technique to a different type of angle measurement system extends the range of the shearing technique further and reveals other advantages. For example, the angular scales of the SAGs are based on linear measurement systems (e.g., capacitive nanosensors for the HPSAG). Therefore, SAGs show different systematic errors when compared to angle encoders. In addition to the error-separation of HPSAG and the autocollimator, detailed investigations on error sources were carried out. Apart from determination of the systematic errors of the capacitive sensor used in the HPSAG, it was also demonstrated that the shearing method enables the unique opportunity to characterize other error sources such as errors due to temperature drift in long term measurements. This proves that the shearing technique is a very powerful method for investigating angle measuring systems, for their improvement, and for specifying precautions to be taken during the measurements.

  8. Preparatory studies for the WFIRST supernova cosmology measurements

    NASA Astrophysics Data System (ADS)

    Perlmutter, Saul

    In the context of the WFIRST-AFTA Science Definition Team we developed a first version of a supernova program, described in the WFIRST-AFTA SDT report. This program uses the imager to discover supernova candidates and an Integral Field Spectrograph (IFS) to obtain spectrophotometric light curves and higher signal to noise spectra of the supernovae near peak to better characterize the supernovae and thus minimize systematic errors. While this program was judged a robust one, and the estimates of the sensitivity to the cosmological parameters were felt to be reliable, due to limitation of time the analysis was clearly limited in depth on a number of issues. The goal of this proposal is to further develop this program and refine the estimates of the sensitivities to the cosmological parameters using more sophisticated systematic uncertainty models and covariance error matrices that fold in more realistic data concerning observed populations of SNe Ia as well as more realistic instrument models. We propose to develop analysis algorithms and approaches that are needed to build, optimize, and refine the WFIRST instrument and program requirements to accomplish the best supernova cosmology measurements possible. We plan to address the following: a) Use realistic Supernova populations, subclasses and population drift. One bothersome uncertainty with the supernova technique is the possibility of population drift with redshift. We are in a unique position to characterize and mitigate such effects using the spectrophotometric time series of real Type Ia supernovae from the Nearby Supernova Factory (SNfactory). Each supernova in this sample has global galaxy measurements as well as additional local environment information derived from the IFS spectroscopy. We plan to develop methods of coping with this issue, e.g., by selecting similar subsamples of supernovae and allowing additional model flexibility, in order to reduce systematic uncertainties. These studies will allow us to tune details, like the wavelength coverage and S/N requirements, of the WFIRST IFS to capitalize on these systematic error reduction methods. b) Supernova extraction and host galaxy subtractions. The underlying light of the host galaxy must be subtracted from the supernova images making up the lightcurves. Using the IFS to provide the lightcurve points via spectrophotometry requires the subtraction of a reference spectrum of the galaxy taken after the supernova light has faded to a negligible level. We plan to apply the expertise obtained from the SNfactory to develop galaxy background procedures that minimize the systematic errors introduced by this step in the analysis. c) Instrument calibration and ground to space cross calibration. Calibrating the entire supernova sample will be a challenge as no standard stars exist that span the range of magnitudes and wavelengths relevant to the WFIRST survey. Linking the supernova measurements to the relatively brighter standards will require several links. WFIRST will produce the high redshift sample, but the nearby supernova to anchor the Hubble diagram will have to come from ground based observations. Developing algorithms to carry out the cross calibration of these two samples to the required one percent level will be an important goal of our proposal. An integral part of this calibration will be to remove all instrumental signatures and to develop unbiased measurement techniques starting at the pixel level. We then plan to pull the above studies together in a synthesis to produce a correlated error matrix. We plan to develop a Fisher Matrix based model to evaluate the correlated error matrix due to the various systematic errors discussed above. A realistic error model will allow us to carry out a more reliable estimates of the eventual errors on the measurement of the cosmological parameters, as well as serve as a means of optimizing and fine tuning the requirements for the instruments and survey strategies.

  9. Systematic Errors in an Air Track Experiment.

    ERIC Educational Resources Information Center

    Ramirez, Santos A.; Ham, Joe S.

    1990-01-01

    Errors found in a common physics experiment to measure acceleration resulting from gravity using a linear air track are investigated. Glider position at release and initial velocity are shown to be sources of systematic error. (CW)

  10. Increasing the reliability of solution exchanges by monitoring solenoid valve actuation.

    PubMed

    Auzmendi, Jerónimo Andrés; Moffatt, Luciano

    2010-01-15

    Solenoid valves are a core component of most solution perfusion systems used in neuroscience research. As they open and close, they control the flow of solution through each perfusion line, thereby modulating the timing and sequence of chemical stimulation. The valves feature a ferromagnetic plunger that moves due to the magnetization of the solenoid and returns to its initial position with the aid of a spring. The delays between the time of voltage application or removal and the actual opening or closing of the valve are difficult to predict beforehand and have to be measured experimentally. Here we propose a simple method for monitoring whether and when the solenoid valve opens and closes. The proposed method detects the movement of the plunger as it generates a measurable signal on the solenoid that surrounds it. Using this plunger signal, we detected the opening and closing of diaphragm and pinch solenoid valves with a systematic error of less than 2ms. After this systematic error is subtracted, the trial-to-trial error was below 0.2ms.

  11. Phylogenomics of Lophotrochozoa with Consideration of Systematic Error.

    PubMed

    Kocot, Kevin M; Struck, Torsten H; Merkel, Julia; Waits, Damien S; Todt, Christiane; Brannock, Pamela M; Weese, David A; Cannon, Johanna T; Moroz, Leonid L; Lieb, Bernhard; Halanych, Kenneth M

    2017-03-01

    Phylogenomic studies have improved understanding of deep metazoan phylogeny and show promise for resolving incongruences among analyses based on limited numbers of loci. One region of the animal tree that has been especially difficult to resolve, even with phylogenomic approaches, is relationships within Lophotrochozoa (the animal clade that includes molluscs, annelids, and flatworms among others). Lack of resolution in phylogenomic analyses could be due to insufficient phylogenetic signal, limitations in taxon and/or gene sampling, or systematic error. Here, we investigated why lophotrochozoan phylogeny has been such a difficult question to answer by identifying and reducing sources of systematic error. We supplemented existing data with 32 new transcriptomes spanning the diversity of Lophotrochozoa and constructed a new set of Lophotrochozoa-specific core orthologs. Of these, 638 orthologous groups (OGs) passed strict screening for paralogy using a tree-based approach. In order to reduce possible sources of systematic error, we calculated branch-length heterogeneity, evolutionary rate, percent missing data, compositional bias, and saturation for each OG and analyzed increasingly stricter subsets of only the most stringent (best) OGs for these five variables. Principal component analysis of the values for each factor examined for each OG revealed that compositional heterogeneity and average patristic distance contributed most to the variance observed along the first principal component while branch-length heterogeneity and, to a lesser extent, saturation contributed most to the variance observed along the second. Missing data did not strongly contribute to either. Additional sensitivity analyses examined effects of removing taxa with heterogeneous branch lengths, large amounts of missing data, and compositional heterogeneity. Although our analyses do not unambiguously resolve lophotrochozoan phylogeny, we advance the field by reducing the list of viable hypotheses. Moreover, our systematic approach for dissection of phylogenomic data can be applied to explore sources of incongruence and poor support in any phylogenomic data set. [Annelida; Brachiopoda; Bryozoa; Entoprocta; Mollusca; Nemertea; Phoronida; Platyzoa; Polyzoa; Spiralia; Trochozoa.]. © The Author(s) 2016. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  12. The quality of systematic reviews about interventions for refractive error can be improved: a review of systematic reviews.

    PubMed

    Mayo-Wilson, Evan; Ng, Sueko Matsumura; Chuck, Roy S; Li, Tianjing

    2017-09-05

    Systematic reviews should inform American Academy of Ophthalmology (AAO) Preferred Practice Pattern® (PPP) guidelines. The quality of systematic reviews related to the forthcoming Preferred Practice Pattern® guideline (PPP) Refractive Errors & Refractive Surgery is unknown. We sought to identify reliable systematic reviews to assist the AAO Refractive Errors & Refractive Surgery PPP. Systematic reviews were eligible if they evaluated the effectiveness or safety of interventions included in the 2012 PPP Refractive Errors & Refractive Surgery. To identify potentially eligible systematic reviews, we searched the Cochrane Eyes and Vision United States Satellite database of systematic reviews. Two authors identified eligible reviews and abstracted information about the characteristics and quality of the reviews independently using the Systematic Review Data Repository. We classified systematic reviews as "reliable" when they (1) defined criteria for the selection of studies, (2) conducted comprehensive literature searches for eligible studies, (3) assessed the methodological quality (risk of bias) of the included studies, (4) used appropriate methods for meta-analyses (which we assessed only when meta-analyses were reported), (5) presented conclusions that were supported by the evidence provided in the review. We identified 124 systematic reviews related to refractive error; 39 met our eligibility criteria, of which we classified 11 to be reliable. Systematic reviews classified as unreliable did not define the criteria for selecting studies (5; 13%), did not assess methodological rigor (10; 26%), did not conduct comprehensive searches (17; 44%), or used inappropriate quantitative methods (3; 8%). The 11 reliable reviews were published between 2002 and 2016. They included 0 to 23 studies (median = 9) and analyzed 0 to 4696 participants (median = 666). Seven reliable reviews (64%) assessed surgical interventions. Most systematic reviews of interventions for refractive error are low methodological quality. Following widely accepted guidance, such as Cochrane or Institute of Medicine standards for conducting systematic reviews, would contribute to improved patient care and inform future research.

  13. An analysis of the least-squares problem for the DSN systematic pointing error model

    NASA Technical Reports Server (NTRS)

    Alvarez, L. S.

    1991-01-01

    A systematic pointing error model is used to calibrate antennas in the Deep Space Network. The least squares problem is described and analyzed along with the solution methods used to determine the model's parameters. Specifically studied are the rank degeneracy problems resulting from beam pointing error measurement sets that incorporate inadequate sky coverage. A least squares parameter subset selection method is described and its applicability to the systematic error modeling process is demonstrated on Voyager 2 measurement distribution.

  14. Seeing in the Dark: Weak Lensing from the Sloan Digital Sky Survey

    NASA Astrophysics Data System (ADS)

    Huff, Eric Michael

    Statistical weak lensing by large-scale structure { cosmic shear { is a promising cosmological tool, which has motivated the design of several large upcoming astronomical surveys. This Thesis presents a measurement of cosmic shear using coadded Sloan Digital Sky Survey (SDSS) imaging in 168 square degrees of the equatorial region, with r < 23:5 and i < 22:5, a source number density of 2.2 per arcmin2 and median redshift of zmed = 0.52. These coadds were generated using a new rounding kernel method that was intended to minimize systematic errors in the lensing measurement due to coherent PSF anisotropies that are otherwise prevalent in the SDSS imaging data. Measurements of cosmic shear out to angular separations of 2 degrees are presented, along with systematics tests of the catalog generation and shear measurement steps that demonstrate that these results are dominated by statistical rather than systematic errors. Assuming a cosmological model corresponding to WMAP7 (Komatsu et al., 2011) and allowing only the amplitude of matter fluctuations sigma8 to vary, the best-t value of the amplitude of matter fluctuations is sigma 8=0.636+0.109-0.154 (1sigma); without systematic errors this would be sigma8=0.636+0.099 -0.137 (1sigma). Assuming a flat Λ CDM model, the combined constraints with WMAP7 are sigma8=0.784+0.028 -0.026 (1sigma). The 2sigma error range is 14 percent smaller than WMAP7 alone. Aside from the intrinsic value of such cosmological constraints from the growth of structure, some important lessons are identified for upcoming surveys that may face similar issues when combining multi-epoch data to measure cosmic shear. Motivated by the challenges faced in the cosmic shear measurement, two new lensing probes are suggested for increasing the available weak lensing signal. Both use galaxy scaling relations to control for scatter in lensing observables. The first employs a version of the well-known fundamental plane relation for early type galaxies. This modified "photometric fundamental plane" replaces velocity dispersions with photometric galaxy properties, thus obviating the need for spectroscopic data. We present the first detection of magnification using this method by applying it to photometric catalogs from the Sloan Digital Sky Survey. This analysis shows that the derived magnification signal is comparable to that available from conventional methods using gravitational shear. We suppress the dominant sources of systematic error and discuss modest improvements that may allow this method to equal or even surpass the signal-to-noise achievable with shear. Moreover, some of the dominant sources of systematic error are substantially different from those of shear-based techniques. The second outlines an idea for using the optical Tully-Fisher relation to dramatically improve the signal-to-noise and systematic error control for shear measurements. The expected error properties and potential advantages of such a measurement are proposed, and a pilot study is suggested in order to test the viability of Tully-Fisher weak lensing in the context of the forthcoming generation of large spectroscopic surveys.

  15. SU-E-T-613: Dosimetric Consequences of Systematic MLC Leaf Positioning Errors

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kathuria, K; Siebers, J

    2014-06-01

    Purpose: The purpose of this study is to determine the dosimetric consequences of systematic MLC leaf positioning errors for clinical IMRT patient plans so as to establish detection tolerances for quality assurance programs. Materials and Methods: Dosimetric consequences were simulated by extracting mlc delivery instructions from the TPS, altering the file by the specified error, reloading the delivery instructions into the TPS, recomputing dose, and extracting dose-volume metrics for one head-andneck and one prostate patient. Machine error was simulated by offsetting MLC leaves in Pinnacle in a systematic way. Three different algorithms were followed for these systematic offsets, and aremore » as follows: a systematic sequential one-leaf offset (one leaf offset in one segment per beam), a systematic uniform one-leaf offset (same one leaf offset per segment per beam) and a systematic offset of a given number of leaves picked uniformly at random from a given number of segments (5 out of 10 total). Dose to the PTV and normal tissue was simulated. Results: A systematic 5 mm offset of 1 leaf for all delivery segments of all beams resulted in a maximum PTV D98 deviation of 1%. Results showed very low dose error in all reasonably possible machine configurations, rare or otherwise, which could be simulated. Very low error in dose to PTV and OARs was shown in all possible cases of one leaf per beam per segment being offset (<1%), or that of only one leaf per beam being offset (<.2%). The errors resulting from a high number of adjacent leaves (maximum of 5 out of 60 total leaf-pairs) being simultaneously offset in many (5) of the control points (total 10–18 in all beams) per beam, in both the PTV and the OARs analyzed, were similarly low (<2–3%). Conclusions: The above results show that patient shifts and anatomical changes are the main source of errors in dose delivered, not machine delivery. These two sources of error are “visually complementary” and uncorrelated (albeit not additive in the final error) and one can easily incorporate error resulting from machine delivery in an error model based purely on tumor motion.« less

  16. A Practical Methodology for Quantifying Random and Systematic Components of Unexplained Variance in a Wind Tunnel

    NASA Technical Reports Server (NTRS)

    Deloach, Richard; Obara, Clifford J.; Goodman, Wesley L.

    2012-01-01

    This paper documents a check standard wind tunnel test conducted in the Langley 0.3-Meter Transonic Cryogenic Tunnel (0.3M TCT) that was designed and analyzed using the Modern Design of Experiments (MDOE). The test designed to partition the unexplained variance of typical wind tunnel data samples into two constituent components, one attributable to ordinary random error, and one attributable to systematic error induced by covariate effects. Covariate effects in wind tunnel testing are discussed, with examples. The impact of systematic (non-random) unexplained variance on the statistical independence of sequential measurements is reviewed. The corresponding correlation among experimental errors is discussed, as is the impact of such correlation on experimental results generally. The specific experiment documented herein was organized as a formal test for the presence of unexplained variance in representative samples of wind tunnel data, in order to quantify the frequency with which such systematic error was detected, and its magnitude relative to ordinary random error. Levels of systematic and random error reported here are representative of those quantified in other facilities, as cited in the references.

  17. Role of turbulence fluctuations on uncertainties of acoutic Doppler current profiler discharge measurements

    USGS Publications Warehouse

    Tarrab, Leticia; Garcia, Carlos M.; Cantero, Mariano I.; Oberg, Kevin

    2012-01-01

    This work presents a systematic analysis quantifying the role of the presence of turbulence fluctuations on uncertainties (random errors) of acoustic Doppler current profiler (ADCP) discharge measurements from moving platforms. Data sets of three-dimensional flow velocities with high temporal and spatial resolution were generated from direct numerical simulation (DNS) of turbulent open channel flow. Dimensionless functions relating parameters quantifying the uncertainty in discharge measurements due to flow turbulence (relative variance and relative maximum random error) to sampling configuration were developed from the DNS simulations and then validated with field-scale discharge measurements. The validated functions were used to evaluate the role of the presence of flow turbulence fluctuations on uncertainties in ADCP discharge measurements. The results of this work indicate that random errors due to the flow turbulence are significant when: (a) a low number of transects is used for a discharge measurement, and (b) measurements are made in shallow rivers using high boat velocity (short time for the boat to cross a flow turbulence structure).

  18. Effect of cephalometer misalignment on calculations of facial asymmetry.

    PubMed

    Lee, Ki-Heon; Hwang, Hyeon-Shik; Curry, Sean; Boyd, Robert L; Norris, Kevin; Baumrind, Sheldon

    2007-07-01

    In this study, we evaluated errors introduced into the interpretation of facial asymmetry on posteroanterior (PA) cephalograms due to malpositioning of the x-ray emitter focal spot. We tested the hypothesis that horizontal displacements of the emitter from its ideal position would produce systematic displacements of skull landmarks that could be fully accounted for by the rules of projective geometry alone. A representative dry skull with 22 metal markers was used to generate a series of PA images from different emitter positions by using a fully calibrated stereo cephalometer. Empirical measurements of the resulting cephalograms were compared with mathematical predictions based solely on geometric rules. The empirical measurements matched the mathematical predictions within the limits of measurement error (x= 0.23 mm), thus supporting the hypothesis. Based upon this finding, we generated a completely symmetrical mathematical skull and calculated the expected errors for focal spots of several different magnitudes. Quantitative data were computed for focal spot displacements of different magnitudes. Misalignment of the x-ray emitter focal spot introduces systematic errors into the interpretation of facial asymmetry on PA cephalograms. For misalignments of less than 20 mm, the effect is small in individual cases. However, misalignments as small as 10 mm can introduce spurious statistical findings of significant asymmetry when mean values for large groups of PA images are evaluated.

  19. Demonstration of Nonlinearity Bias in the Measurement of the Apparent Diffusion Coefficient in Multicenter Trials

    PubMed Central

    Malyarenko, Dariya; Newitt, David; Wilmes, Lisa; Tudorica, Alina; Helmer, Karl G.; Arlinghaus, Lori R.; Jacobs, Michael A.; Jajamovich, Guido; Taouli, Bachir; Yankeelov, Thomas E.; Huang, Wei; Chenevert, Thomas L.

    2015-01-01

    Purpose Characterize system-specific bias across common magnetic resonance imaging (MRI) platforms for quantitative diffusion measurements in multicenter trials. Methods Diffusion weighted imaging (DWI) was performed on an ice-water phantom along the superior-inferior (SI) and right-left (RL) orientations spanning ±150 mm. The same scanning protocol was implemented on 14 MRI systems at seven imaging centers. The bias was estimated as a deviation of measured from known apparent diffusion coefficient (ADC) along individual DWI directions. The relative contributions of gradient nonlinearity, shim errors, imaging gradients and eddy currents were assessed independently. The observed bias errors were compared to numerical models. Results The measured systematic ADC errors scaled quadratically with offset from isocenter, and ranged between −55% (SI) and 25% (RL). Nonlinearity bias was dependent on system design and diffusion gradient direction. Consistent with numerical models, minor ADC errors (±5%) due to shim, imaging and eddy currents were mitigated by double echo DWI and image co-registration of individual gradient directions. Conclusion The analysis confirms gradient nonlinearity as a major source of spatial DW bias and variability in off-center ADC measurements across MRI platforms, with minor contributions from shim, imaging gradients and eddy currents. The developed protocol enables empiric description of systematic bias in multicenter quantitative DWI studies. PMID:25940607

  20. Demonstration of nonlinearity bias in the measurement of the apparent diffusion coefficient in multicenter trials.

    PubMed

    Malyarenko, Dariya I; Newitt, David; J Wilmes, Lisa; Tudorica, Alina; Helmer, Karl G; Arlinghaus, Lori R; Jacobs, Michael A; Jajamovich, Guido; Taouli, Bachir; Yankeelov, Thomas E; Huang, Wei; Chenevert, Thomas L

    2016-03-01

    Characterize system-specific bias across common magnetic resonance imaging (MRI) platforms for quantitative diffusion measurements in multicenter trials. Diffusion weighted imaging (DWI) was performed on an ice-water phantom along the superior-inferior (SI) and right-left (RL) orientations spanning ± 150 mm. The same scanning protocol was implemented on 14 MRI systems at seven imaging centers. The bias was estimated as a deviation of measured from known apparent diffusion coefficient (ADC) along individual DWI directions. The relative contributions of gradient nonlinearity, shim errors, imaging gradients, and eddy currents were assessed independently. The observed bias errors were compared with numerical models. The measured systematic ADC errors scaled quadratically with offset from isocenter, and ranged between -55% (SI) and 25% (RL). Nonlinearity bias was dependent on system design and diffusion gradient direction. Consistent with numerical models, minor ADC errors (± 5%) due to shim, imaging and eddy currents were mitigated by double echo DWI and image coregistration of individual gradient directions. The analysis confirms gradient nonlinearity as a major source of spatial DW bias and variability in off-center ADC measurements across MRI platforms, with minor contributions from shim, imaging gradients and eddy currents. The developed protocol enables empiric description of systematic bias in multicenter quantitative DWI studies. © 2015 Wiley Periodicals, Inc.

  1. Global Vision Impairment and Blindness Due to Uncorrected Refractive Error, 1990-2010.

    PubMed

    Naidoo, Kovin S; Leasher, Janet; Bourne, Rupert R; Flaxman, Seth R; Jonas, Jost B; Keeffe, Jill; Limburg, Hans; Pesudovs, Konrad; Price, Holly; White, Richard A; Wong, Tien Y; Taylor, Hugh R; Resnikoff, Serge

    2016-03-01

    The purpose of this systematic review was to estimate worldwide the number of people with moderate and severe visual impairment (MSVI; presenting visual acuity <6/18, ≥3/60) or blindness (presenting visual acuity <3/60) due to uncorrected refractive error (URE), to estimate trends in prevalence from 1990 to 2010, and to analyze regional differences. The review focuses on uncorrected refractive error which is now the most common cause of avoidable visual impairment globally. : The systematic review of 14,908 relevant manuscripts from 1990 to 2010 using Medline, Embase, and WHOLIS yielded 243 high-quality, population-based cross-sectional studies which informed a meta-analysis of trends by region. The results showed that in 2010, 6.8 million (95% confidence interval [CI]: 4.7-8.8 million) people were blind (7.9% increase from 1990) and 101.2 million (95% CI: 87.88-125.5 million) vision impaired due to URE (15% increase since 1990), while the global population increased by 30% (1990-2010). The all-age age-standardized prevalence of URE blindness decreased 33% from 0.2% (95% CI: 0.1-0.2%) in 1990 to 0.1% (95% CI: 0.1-0.1%) in 2010, whereas the prevalence of URE MSVI decreased 25% from 2.1% (95% CI: 1.6-2.4%) in 1990 to 1.5% (95% CI: 1.3-1.9%) in 2010. In 2010, URE contributed 20.9% (95% CI: 15.2-25.9%) of all blindness and 52.9% (95% CI: 47.2-57.3%) of all MSVI worldwide. The contribution of URE to all MSVI ranged from 44.2 to 48.1% in all regions except in South Asia which was at 65.4% (95% CI: 62-72%). : We conclude that in 2010, uncorrected refractive error continues as the leading cause of vision impairment and the second leading cause of blindness worldwide, affecting a total of 108 million people or 1 in 90 persons.

  2. Exploring cosmic origins with CORE: Mitigation of systematic effects

    NASA Astrophysics Data System (ADS)

    Natoli, P.; Ashdown, M.; Banerji, R.; Borrill, J.; Buzzelli, A.; de Gasperis, G.; Delabrouille, J.; Hivon, E.; Molinari, D.; Patanchon, G.; Polastri, L.; Tomasi, M.; Bouchet, F. R.; Henrot-Versillé, S.; Hoang, D. T.; Keskitalo, R.; Kiiveri, K.; Kisner, T.; Lindholm, V.; McCarthy, D.; Piacentini, F.; Perdereau, O.; Polenta, G.; Tristram, M.; Achucarro, A.; Ade, P.; Allison, R.; Baccigalupi, C.; Ballardini, M.; Banday, A. J.; Bartlett, J.; Bartolo, N.; Basak, S.; Baumann, D.; Bersanelli, M.; Bonaldi, A.; Bonato, M.; Boulanger, F.; Brinckmann, T.; Bucher, M.; Burigana, C.; Cai, Z.-Y.; Calvo, M.; Carvalho, C.-S.; Castellano, M. G.; Challinor, A.; Chluba, J.; Clesse, S.; Colantoni, I.; Coppolecchia, A.; Crook, M.; D'Alessandro, G.; de Bernardis, P.; De Zotti, G.; Di Valentino, E.; Diego, J.-M.; Errard, J.; Feeney, S.; Fernandez-Cobos, R.; Finelli, F.; Forastieri, F.; Galli, S.; Genova-Santos, R.; Gerbino, M.; González-Nuevo, J.; Grandis, S.; Greenslade, J.; Gruppuso, A.; Hagstotz, S.; Hanany, S.; Handley, W.; Hernandez-Monteagudo, C.; Hervías-Caimapo, C.; Hills, M.; Keihänen, E.; Kitching, T.; Kunz, M.; Kurki-Suonio, H.; Lamagna, L.; Lasenby, A.; Lattanzi, M.; Lesgourgues, J.; Lewis, A.; Liguori, M.; López-Caniego, M.; Luzzi, G.; Maffei, B.; Mandolesi, N.; Martinez-González, E.; Martins, C. J. A. P.; Masi, S.; Matarrese, S.; Melchiorri, A.; Melin, J.-B.; Migliaccio, M.; Monfardini, A.; Negrello, M.; Notari, A.; Pagano, L.; Paiella, A.; Paoletti, D.; Piat, M.; Pisano, G.; Pollo, A.; Poulin, V.; Quartin, M.; Remazeilles, M.; Roman, M.; Rossi, G.; Rubino-Martin, J.-A.; Salvati, L.; Signorelli, G.; Tartari, A.; Tramonte, D.; Trappe, N.; Trombetti, T.; Tucker, C.; Valiviita, J.; Van de Weijgaert, R.; van Tent, B.; Vennin, V.; Vielva, P.; Vittorio, N.; Wallis, C.; Young, K.; Zannoni, M.

    2018-04-01

    We present an analysis of the main systematic effects that could impact the measurement of CMB polarization with the proposed CORE space mission. We employ timeline-to-map simulations to verify that the CORE instrumental set-up and scanning strategy allow us to measure sky polarization to a level of accuracy adequate to the mission science goals. We also show how the CORE observations can be processed to mitigate the level of contamination by potentially worrying systematics, including intensity-to-polarization leakage due to bandpass mismatch, asymmetric main beams, pointing errors and correlated noise. We use analysis techniques that are well validated on data from current missions such as Planck to demonstrate how the residual contamination of the measurements by these effects can be brought to a level low enough not to hamper the scientific capability of the mission, nor significantly increase the overall error budget. We also present a prototype of the CORE photometric calibration pipeline, based on that used for Planck, and discuss its robustness to systematics, showing how CORE can achieve its calibration requirements. While a fine-grained assessment of the impact of systematics requires a level of knowledge of the system that can only be achieved in a future study phase, the analysis presented here strongly suggests that the main areas of concern for the CORE mission can be addressed using existing knowledge, techniques and algorithms.

  3. Modeling Errors in Daily Precipitation Measurements: Additive or Multiplicative?

    NASA Technical Reports Server (NTRS)

    Tian, Yudong; Huffman, George J.; Adler, Robert F.; Tang, Ling; Sapiano, Matthew; Maggioni, Viviana; Wu, Huan

    2013-01-01

    The definition and quantification of uncertainty depend on the error model used. For uncertainties in precipitation measurements, two types of error models have been widely adopted: the additive error model and the multiplicative error model. This leads to incompatible specifications of uncertainties and impedes intercomparison and application.In this letter, we assess the suitability of both models for satellite-based daily precipitation measurements in an effort to clarify the uncertainty representation. Three criteria were employed to evaluate the applicability of either model: (1) better separation of the systematic and random errors; (2) applicability to the large range of variability in daily precipitation; and (3) better predictive skills. It is found that the multiplicative error model is a much better choice under all three criteria. It extracted the systematic errors more cleanly, was more consistent with the large variability of precipitation measurements, and produced superior predictions of the error characteristics. The additive error model had several weaknesses, such as non constant variance resulting from systematic errors leaking into random errors, and the lack of prediction capability. Therefore, the multiplicative error model is a better choice.

  4. The Phylogeny of Rickettsia Using Different Evolutionary Signatures: How Tree-Like is Bacterial Evolution?

    PubMed Central

    Murray, Gemma G. R.; Weinert, Lucy A.; Rhule, Emma L.; Welch, John J.

    2016-01-01

    Rickettsia is a genus of intracellular bacteria whose hosts and transmission strategies are both impressively diverse, and this is reflected in a highly dynamic genome. Some previous studies have described the evolutionary history of Rickettsia as non-tree-like, due to incongruity between phylogenetic reconstructions using different portions of the genome. Here, we reconstruct the Rickettsia phylogeny using whole-genome data, including two new genomes from previously unsampled host groups. We find that a single topology, which is supported by multiple sources of phylogenetic signal, well describes the evolutionary history of the core genome. We do observe extensive incongruence between individual gene trees, but analyses of simulations over a single topology and interspersed partitions of sites show that this is more plausibly attributed to systematic error than to horizontal gene transfer. Some conflicting placements also result from phylogenetic analyses of accessory genome content (i.e., gene presence/absence), but we argue that these are also due to systematic error, stemming from convergent genome reduction, which cannot be accommodated by existing phylogenetic methods. Our results show that, even within a single genus, tests for gene exchange based on phylogenetic incongruence may be susceptible to false positives. PMID:26559010

  5. Reconstructing the calibrated strain signal in the Advanced LIGO detectors

    NASA Astrophysics Data System (ADS)

    Viets, A. D.; Wade, M.; Urban, A. L.; Kandhasamy, S.; Betzwieser, J.; Brown, Duncan A.; Burguet-Castell, J.; Cahillane, C.; Goetz, E.; Izumi, K.; Karki, S.; Kissel, J. S.; Mendell, G.; Savage, R. L.; Siemens, X.; Tuyenbayev, D.; Weinstein, A. J.

    2018-05-01

    Advanced LIGO’s raw detector output needs to be calibrated to compute dimensionless strain h(t) . Calibrated strain data is produced in the time domain using both a low-latency, online procedure and a high-latency, offline procedure. The low-latency h(t) data stream is produced in two stages, the first of which is performed on the same computers that operate the detector’s feedback control system. This stage, referred to as the front-end calibration, uses infinite impulse response (IIR) filtering and performs all operations at a 16 384 Hz digital sampling rate. Due to several limitations, this procedure currently introduces certain systematic errors in the calibrated strain data, motivating the second stage of the low-latency procedure, known as the low-latency gstlal calibration pipeline. The gstlal calibration pipeline uses finite impulse response (FIR) filtering to apply corrections to the output of the front-end calibration. It applies time-dependent correction factors to the sensing and actuation components of the calibrated strain to reduce systematic errors. The gstlal calibration pipeline is also used in high latency to recalibrate the data, which is necessary due mainly to online dropouts in the calibrated data and identified improvements to the calibration models or filters.

  6. Subaperture test of wavefront error of large telescopes: error sources and stitching performance simulations

    NASA Astrophysics Data System (ADS)

    Chen, Shanyong; Li, Shengyi; Wang, Guilin

    2014-11-01

    The wavefront error of large telescopes requires to be measured to check the system quality and also estimate the misalignment of the telescope optics including the primary, the secondary and so on. It is usually realized by a focal plane interferometer and an autocollimator flat (ACF) of the same aperture with the telescope. However, it is challenging for meter class telescopes due to high cost and technological challenges in producing the large ACF. Subaperture test with a smaller ACF is hence proposed in combination with advanced stitching algorithms. Major error sources include the surface error of the ACF, misalignment of the ACF and measurement noises. Different error sources have different impacts on the wavefront error. Basically the surface error of the ACF behaves like systematic error and the astigmatism will be cumulated and enlarged if the azimuth of subapertures remains fixed. It is difficult to accurately calibrate the ACF because it suffers considerable deformation induced by gravity or mechanical clamping force. Therefore a selfcalibrated stitching algorithm is employed to separate the ACF surface error from the subaperture wavefront error. We suggest the ACF be rotated around the optical axis of the telescope for subaperture test. The algorithm is also able to correct the subaperture tip-tilt based on the overlapping consistency. Since all subaperture measurements are obtained in the same imaging plane, lateral shift of the subapertures is always known and the real overlapping points can be recognized in this plane. Therefore lateral positioning error of subapertures has no impact on the stitched wavefront. In contrast, the angular positioning error changes the azimuth of the ACF and finally changes the systematic error. We propose an angularly uneven layout of subapertures to minimize the stitching error, which is very different from our knowledge. At last, measurement noises could never be corrected but be suppressed by means of averaging and environmental control. We simulate the performance of the stitching algorithm dealing with surface error and misalignment of the ACF, and noise suppression, which provides guidelines to optomechanical design of the stitching test system.

  7. Accuracy Analysis on Large Blocks of High Resolution Images

    NASA Technical Reports Server (NTRS)

    Passini, Richardo M.

    2007-01-01

    Although high altitude frequencies effects are removed at the time of basic image generation, low altitude (Yaw) effects are still present in form of affinity/angular affinity. They are effectively removed by additional parameters. Bundle block adjustment based on properly weighted ephemeris/altitude quaternions (BBABEQ) are not enough to remove the systematic effect. Moreover, due to the narrow FOV of the HRSI, position and altitude are highly correlated making it almost impossible to separate and remove their systematic effects without extending the geometric model (Self-Calib.) The systematic effects gets evident on the increase of accuracy (in terms of RMSE at GCPs) for looser and relaxed ground control at the expense of large and strong block deformation with large residuals at check points. Systematic errors are most freely distributed and their effects propagated all over the block.

  8. Regionalized PM2.5 Community Multiscale Air Quality model performance evaluation across a continuous spatiotemporal domain.

    PubMed

    Reyes, Jeanette M; Xu, Yadong; Vizuete, William; Serre, Marc L

    2017-01-01

    The regulatory Community Multiscale Air Quality (CMAQ) model is a means to understanding the sources, concentrations and regulatory attainment of air pollutants within a model's domain. Substantial resources are allocated to the evaluation of model performance. The Regionalized Air quality Model Performance (RAMP) method introduced here explores novel ways of visualizing and evaluating CMAQ model performance and errors for daily Particulate Matter ≤ 2.5 micrometers (PM2.5) concentrations across the continental United States. The RAMP method performs a non-homogenous, non-linear, non-homoscedastic model performance evaluation at each CMAQ grid. This work demonstrates that CMAQ model performance, for a well-documented 2001 regulatory episode, is non-homogeneous across space/time. The RAMP correction of systematic errors outperforms other model evaluation methods as demonstrated by a 22.1% reduction in Mean Square Error compared to a constant domain wide correction. The RAMP method is able to accurately reproduce simulated performance with a correlation of r = 76.1%. Most of the error coming from CMAQ is random error with only a minority of error being systematic. Areas of high systematic error are collocated with areas of high random error, implying both error types originate from similar sources. Therefore, addressing underlying causes of systematic error will have the added benefit of also addressing underlying causes of random error.

  9. Reliable estimation of orbit errors in spaceborne SAR interferometry. The network approach

    NASA Astrophysics Data System (ADS)

    Bähr, Hermann; Hanssen, Ramon F.

    2012-12-01

    An approach to improve orbital state vectors by orbit error estimates derived from residual phase patterns in synthetic aperture radar interferograms is presented. For individual interferograms, an error representation by two parameters is motivated: the baseline error in cross-range and the rate of change of the baseline error in range. For their estimation, two alternatives are proposed: a least squares approach that requires prior unwrapping and a less reliable gridsearch method handling the wrapped phase. In both cases, reliability is enhanced by mutual control of error estimates in an overdetermined network of linearly dependent interferometric combinations of images. Thus, systematic biases, e.g., due to unwrapping errors, can be detected and iteratively eliminated. Regularising the solution by a minimum-norm condition results in quasi-absolute orbit errors that refer to particular images. For the 31 images of a sample ENVISAT dataset, orbit corrections with a mutual consistency on the millimetre level have been inferred from 163 interferograms. The method itself qualifies by reliability and rigorous geometric modelling of the orbital error signal but does not consider interfering large scale deformation effects. However, a separation may be feasible in a combined processing with persistent scatterer approaches or by temporal filtering of the estimates.

  10. Errors in radial velocity variance from Doppler wind lidar

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wang, H.; Barthelmie, R. J.; Doubrawa, P.

    A high-fidelity lidar turbulence measurement technique relies on accurate estimates of radial velocity variance that are subject to both systematic and random errors determined by the autocorrelation function of radial velocity, the sampling rate, and the sampling duration. Our paper quantifies the effect of the volumetric averaging in lidar radial velocity measurements on the autocorrelation function and the dependence of the systematic and random errors on the sampling duration, using both statistically simulated and observed data. For current-generation scanning lidars and sampling durations of about 30 min and longer, during which the stationarity assumption is valid for atmospheric flows, themore » systematic error is negligible but the random error exceeds about 10%.« less

  11. Errors in radial velocity variance from Doppler wind lidar

    DOE PAGES

    Wang, H.; Barthelmie, R. J.; Doubrawa, P.; ...

    2016-08-29

    A high-fidelity lidar turbulence measurement technique relies on accurate estimates of radial velocity variance that are subject to both systematic and random errors determined by the autocorrelation function of radial velocity, the sampling rate, and the sampling duration. Our paper quantifies the effect of the volumetric averaging in lidar radial velocity measurements on the autocorrelation function and the dependence of the systematic and random errors on the sampling duration, using both statistically simulated and observed data. For current-generation scanning lidars and sampling durations of about 30 min and longer, during which the stationarity assumption is valid for atmospheric flows, themore » systematic error is negligible but the random error exceeds about 10%.« less

  12. SKA weak lensing - III. Added value of multiwavelength synergies for the mitigation of systematics

    NASA Astrophysics Data System (ADS)

    Camera, Stefano; Harrison, Ian; Bonaldi, Anna; Brown, Michael L.

    2017-02-01

    In this third paper of a series on radio weak lensing for cosmology with the Square Kilometre Array, we scrutinize synergies between cosmic shear measurements in the radio and optical/near-infrared (IR) bands for mitigating systematic effects. We focus on three main classes of systematics: (I) experimental systematic errors in the observed shear; (II) signal contamination by intrinsic alignments and (III) systematic effects due to an incorrect modelling of non-linear scales. First, we show that a comprehensive, multiwavelength analysis provides a self-calibration method for experimental systematic effects, only implying <50 per cent increment on the errors on cosmological parameters. We also illustrate how the cross-correlation between radio and optical/near-IR surveys alone is able to remove residual systematics with variance as large as 10-5, I.e. the same order of magnitude of the cosmological signal. This also opens the possibility of using such a cross-correlation as a means to detect unknown experimental systematics. Secondly, we demonstrate that, thanks to polarization information, radio weak lensing surveys will be able to mitigate contamination by intrinsic alignments, in a way similar but fully complementary to available self-calibration methods based on position-shear correlations. Lastly, we illustrate how radio weak lensing experiments, reaching higher redshifts than those accessible to optical surveys, will probe dark energy and the growth of cosmic structures in regimes less contaminated by non-linearities in the matter perturbations. For instance, the higher redshift bins of radio catalogues peak at z ≃ 0.8-1, whereas their optical/near-IR counterparts are limited to z ≲ 0.5-0.7. This translates into having a cosmological signal 2-5 times less contaminated by non-linear perturbations.

  13. Systematic effects on dark energy from 3D weak shear

    NASA Astrophysics Data System (ADS)

    Kitching, T. D.; Taylor, A. N.; Heavens, A. F.

    2008-09-01

    We present an investigation into the potential effect of systematics inherent in multiband wide-field surveys on the dark energy equation-of-state determination for two 3D weak lensing methods. The weak lensing methods are a geometric shear-ratio method and 3D cosmic shear. The analysis here uses an extension of the Fisher matrix framework to include jointly photometric redshift systematics, shear distortion systematics and intrinsic alignments. Using analytic parametrizations of these three primary systematic effects allows an isolation of systematic parameters of particular importance. We show that assuming systematic parameters are fixed, but possibly biased, results in potentially large biases in dark energy parameters. We quantify any potential bias by defining a Bias Figure of Merit. By marginalizing over extra systematic parameters, such biases are negated at the expense of an increase in the cosmological parameter errors. We show the effect on the dark energy Figure of Merit of marginalizing over each systematic parameter individually. We also show the overall reduction in the Figure of Merit due to all three types of systematic effects. Based on some assumption of the likely level of systematic errors, we find that the largest effect on the Figure of Merit comes from uncertainty in the photometric redshift systematic parameters. These can reduce the Figure of Merit by up to a factor of 2 to 4 in both 3D weak lensing methods, if no informative prior on the systematic parameters is applied. Shear distortion systematics have a smaller overall effect. Intrinsic alignment effects can reduce the Figure of Merit by up to a further factor of 2. This, however, is a worst-case scenario, within the assumptions of the parametrizations used. By including prior information on systematic parameters, the Figure of Merit can be recovered to a large extent, and combined constraints from 3D cosmic shear and shear ratio are robust to systematics. We conclude that, as a rule of thumb, given a realistic current understanding of intrinsic alignments and photometric redshifts, then including all three primary systematic effects reduces the Figure of Merit by at most a factor of 2.

  14. Extension of sonic anemometry to high subsonic Mach number flows

    NASA Astrophysics Data System (ADS)

    Otero, R.; Lowe, K. T.; Ng, W. F.

    2017-03-01

    In the literature, the application of sonic anemometry has been limited to low subsonic Mach number, near-incompressible flow conditions. To the best of the authors’ knowledge, this paper represents the first time a sonic anemometry approach has been used to characterize flow velocity beyond Mach 0.3. Using a high speed jet, flow velocity was measured using a modified sonic anemometry technique in flow conditions up to Mach 0.83. A numerical study was conducted to identify the effects of microphone placement on the accuracy of the measured velocity. Based on estimated error strictly due to uncertainty in time-of-acoustic flight, a random error of +/- 4 m s-1 was identified for the configuration used in this experiment. Comparison with measurements from a Pitot probe indicated a velocity RMS error of +/- 9 m s-1. The discrepancy in error is attributed to a systematic error which may be calibrated out in future work. Overall, the experimental results from this preliminary study support the use of acoustics for high subsonic flow characterization.

  15. Design and analysis of a sub-aperture scanning machine for the transmittance measurements of large-aperture optical system

    NASA Astrophysics Data System (ADS)

    He, Yingwei; Li, Ping; Feng, Guojin; Cheng, Li; Wang, Yu; Wu, Houping; Liu, Zilong; Zheng, Chundi; Sha, Dingguo

    2010-11-01

    For measuring large-aperture optical system transmittance, a novel sub-aperture scanning machine with double-rotating arms (SSMDA) was designed to obtain sub-aperture beam spot. Optical system full-aperture transmittance measurements can be achieved by applying sub-aperture beam spot scanning technology. The mathematical model of the SSMDA based on a homogeneous coordinate transformation matrix is established to develop a detailed methodology for analyzing the beam spot scanning errors. The error analysis methodology considers two fundamental sources of scanning errors, namely (1) the length systematic errors and (2) the rotational systematic errors. As the systematic errors of the parameters are given beforehand, computational results of scanning errors are between -0.007~0.028mm while scanning radius is not lager than 400.000mm. The results offer theoretical and data basis to the research on transmission characteristics of large optical system.

  16. From Clinical Interviews to Policy Recommendations: A Case Study in High School Computer Programming. Study of Stanford and the Schools Technology Panel.

    ERIC Educational Resources Information Center

    Sleeman, D.; Gong, Brian

    In order to determine the knowledge and skills needed by novice programmers to successfully learn computer programming, four studies were conducted using a clinical interview technique. The first study determined that many systematic errors in programming were due to programmers' high-level misconceptions of the nature of the computer and of the…

  17. Scattering from binary optics

    NASA Technical Reports Server (NTRS)

    Ricks, Douglas W.

    1993-01-01

    There are a number of sources of scattering in binary optics: etch depth errors, line edge errors, quantization errors, roughness, and the binary approximation to the ideal surface. These sources of scattering can be systematic (deterministic) or random. In this paper, scattering formulas for both systematic and random errors are derived using Fourier optics. These formulas can be used to explain the results of scattering measurements and computer simulations.

  18. Using Laser Scanners to Augment the Systematic Error Pointing Model

    NASA Astrophysics Data System (ADS)

    Wernicke, D. R.

    2016-08-01

    The antennas of the Deep Space Network (DSN) rely on precise pointing algorithms to communicate with spacecraft that are billions of miles away. Although the existing systematic error pointing model is effective at reducing blind pointing errors due to static misalignments, several of its terms have a strong dependence on seasonal and even daily thermal variation and are thus not easily modeled. Changes in the thermal state of the structure create a separation from the model and introduce a varying pointing offset. Compensating for this varying offset is possible by augmenting the pointing model with laser scanners. In this approach, laser scanners mounted to the alidade measure structural displacements while a series of transformations generate correction angles. Two sets of experiments were conducted in August 2015 using commercially available laser scanners. When compared with historical monopulse corrections under similar conditions, the computed corrections are within 3 mdeg of the mean. However, although the results show promise, several key challenges relating to the sensitivity of the optical equipment to sunlight render an implementation of this approach impractical. Other measurement devices such as inclinometers may be implementable at a significantly lower cost.

  19. Black hole masses in active galactic nuclei

    NASA Astrophysics Data System (ADS)

    Denney, Kelly D.

    2010-11-01

    We present the complete results from two, high sampling-rate, multi-month, spectrophotometric reverberation mapping campaigns undertaken to obtain either new or improved Hbeta reverberation lag measurements for several relatively low-luminosity active galactic nuclei (AGNs). We have reliably measured the time delay between variations in the continuum and Hbeta emission line in seven local Seyfert 1 galaxies. These measurements are used to calculate the mass of the supermassive black hole at the center of each of these AGNs. We place our results in context to the most current calibration of the broad-line region (BLR) RBLR-L relationship, where our results remove many outliers and significantly reduce the scatter at the low-luminosity end of this relationship. A detailed analysis of the data from our high sampling rate, multi-month reverberation mapping campaign in 2007 reveals that the Hbeta emission region within the BLRs of several nearby AGNs exhibit a variety of kinematic behaviors. Through a velocity-resolved reverberation analysis of the broad Hbeta emission-line flux variations in our sample, we reconstruct velocity-resolved kinematic signals for our entire sample and clearly see evidence for outflowing, infalling, and virialized BLR gas motions in NGC 3227, NGC 3516, and NGC 5548, respectively. Finally, we explore the nature of systematic errors that can arise in measurements of black hole masses from single-epoch spectra of AGNs by utilizing the many epochs available for NGC 5548 and PG1229+204 from reverberation mapping databases. In particular, we examine systematics due to AGN variability, contamination due to constant spectral components (i.e., narrow lines and host galaxy flux), data quality (i.e., signal-to-noise ratio, S/N), and blending of spectral features. We investigate the effect that each of these systematics has on the precision and accuracy of single-epoch masses calculated from two commonly-used line-width measures by comparing these results to recent reverberation mapping studies. We then present an error budget which summarizes the minimum observable uncertainties as well as the amount of additional scatter and/or systematic offset that can be expected from the individual sources of error investigated.

  20. On the Quality of Point-Clouds Derived from Sfm-Photogrammetry Applied to UAS Imagery

    NASA Astrophysics Data System (ADS)

    Carbonneau, P.; James, T.

    2014-12-01

    Structure from Motion photogrammetry (SfM-photogrammetry) recently appeared in environmental sciences as an impressive tool allowing for the creation of topographic data from unstructured imagery. Several authors have tested the performance of SfM-photogrammetry vs that of TLS or dGPS. Whilst the initial results were very promising, there is currently a growing awareness that systematic deformations occur in DEMs and point-clouds derived from SfM-photogrammetry. Notably, some authors have identified a systematic doming manifest as an increasing error vs distance to the model centre. Simulation studies have confirmed that this error is due to errors in the calibration of camera distortions. This work aims to further investigate these effects in the presence of real data. We start with a dataset of 220 images acquired from a sUAS. After obtaining an initial self-calibration of the camera lens with Agisoft Photoscan, our method consists in applying systematic perturbations to 2 key lens parameters: Focal length and the k1 distortion parameter. For each perturbation, a point-cloud was produced and compared to LiDAR data. After deriving the mean and standard deviation of the error residuals (ɛ), a 2nd order polynomial surface was fitted to the errors point-cloud and the peak ɛ defined as the mathematical extrema of this surface. The results are presented in figure 1. This figure shows that lens perturbations can induce a range of errors with systematic behaviours. Peak ɛ is primarily controlled by K1 with a secondary control exerted by the focal length. These results allow us to state that: To limit the peak ɛ to 10cm, the K1 parameter must be calibrated to within 0.00025 and the focal length to within 2.5 pixels (≈10 µm). This level of calibration accuracy can only be achieved with proper design of image acquisition and control network geometry. Our main point is therefore that SfM is not a bypass to a rigorous and well-informed photogrammetric approach. Users of SfM-photogrammetry will still require basic training and knowledge in the fundamentals of photogrammetry. This is especially true for applications where very small topographic changes need to be detected or where gradient-sensitive processes need to be modelled.

  1. Systematic errors of EIT systems determined by easily-scalable resistive phantoms.

    PubMed

    Hahn, G; Just, A; Dittmar, J; Hellige, G

    2008-06-01

    We present a simple method to determine systematic errors that will occur in the measurements by EIT systems. The approach is based on very simple scalable resistive phantoms for EIT systems using a 16 electrode adjacent drive pattern. The output voltage of the phantoms is constant for all combinations of current injection and voltage measurements and the trans-impedance of each phantom is determined by only one component. It can be chosen independently from the input and output impedance, which can be set in order to simulate measurements on the human thorax. Additional serial adapters allow investigation of the influence of the contact impedance at the electrodes on resulting errors. Since real errors depend on the dynamic properties of an EIT system, the following parameters are accessible: crosstalk, the absolute error of each driving/sensing channel and the signal to noise ratio in each channel. Measurements were performed on a Goe-MF II EIT system under four different simulated operational conditions. We found that systematic measurement errors always exceeded the error level of stochastic noise since the Goe-MF II system had been optimized for a sufficient signal to noise ratio but not for accuracy. In time difference imaging and functional EIT (f-EIT) systematic errors are reduced to a minimum by dividing the raw data by reference data. This is not the case in absolute EIT (a-EIT) where the resistivity of the examined object is determined on an absolute scale. We conclude that a reduction of systematic errors has to be one major goal in future system design.

  2. Complete Systematic Error Model of SSR for Sensor Registration in ATC Surveillance Networks

    PubMed Central

    Besada, Juan A.

    2017-01-01

    In this paper, a complete and rigorous mathematical model for secondary surveillance radar systematic errors (biases) is developed. The model takes into account the physical effects systematically affecting the measurement processes. The azimuth biases are calculated from the physical error of the antenna calibration and the errors of the angle determination dispositive. Distance bias is calculated from the delay of the signal produced by the refractivity index of the atmosphere, and from clock errors, while the altitude bias is calculated taking into account the atmosphere conditions (pressure and temperature). It will be shown, using simulated and real data, that adapting a classical bias estimation process to use the complete parametrized model results in improved accuracy in the bias estimation. PMID:28934157

  3. Synoptic scale forecast skill and systematic errors in the MASS 2.0 model. [Mesoscale Atmospheric Simulation System

    NASA Technical Reports Server (NTRS)

    Koch, S. E.; Skillman, W. C.; Kocin, P. J.; Wetzel, P. J.; Brill, K. F.

    1985-01-01

    The synoptic scale performance characteristics of MASS 2.0 are determined by comparing filtered 12-24 hr model forecasts to same-case forecasts made by the National Meteorological Center's synoptic-scale Limited-area Fine Mesh model. Characteristics of the two systems are contrasted, and the analysis methodology used to determine statistical skill scores and systematic errors is described. The overall relative performance of the two models in the sample is documented, and important systematic errors uncovered are presented.

  4. A new systematic calibration method of ring laser gyroscope inertial navigation system

    NASA Astrophysics Data System (ADS)

    Wei, Guo; Gao, Chunfeng; Wang, Qi; Wang, Qun; Xiong, Zhenyu; Long, Xingwu

    2016-10-01

    Inertial navigation system has been the core component of both military and civil navigation systems. Before the INS is put into application, it is supposed to be calibrated in the laboratory in order to compensate repeatability error caused by manufacturing. Discrete calibration method cannot fulfill requirements of high-accurate calibration of the mechanically dithered ring laser gyroscope navigation system with shock absorbers. This paper has analyzed theories of error inspiration and separation in detail and presented a new systematic calibration method for ring laser gyroscope inertial navigation system. Error models and equations of calibrated Inertial Measurement Unit are given. Then proper rotation arrangement orders are depicted in order to establish the linear relationships between the change of velocity errors and calibrated parameter errors. Experiments have been set up to compare the systematic errors calculated by filtering calibration result with those obtained by discrete calibration result. The largest position error and velocity error of filtering calibration result are only 0.18 miles and 0.26m/s compared with 2 miles and 1.46m/s of discrete calibration result. These results have validated the new systematic calibration method and proved its importance for optimal design and accuracy improvement of calibration of mechanically dithered ring laser gyroscope inertial navigation system.

  5. Measuring Systematic Error with Curve Fits

    ERIC Educational Resources Information Center

    Rupright, Mark E.

    2011-01-01

    Systematic errors are often unavoidable in the introductory physics laboratory. As has been demonstrated in many papers in this journal, such errors can present a fundamental problem for data analysis, particularly when comparing the data to a given model. In this paper I give three examples in which my students use popular curve-fitting software…

  6. Systematic Error Modeling and Bias Estimation

    PubMed Central

    Zhang, Feihu; Knoll, Alois

    2016-01-01

    This paper analyzes the statistic properties of the systematic error in terms of range and bearing during the transformation process. Furthermore, we rely on a weighted nonlinear least square method to calculate the biases based on the proposed models. The results show the high performance of the proposed approach for error modeling and bias estimation. PMID:27213386

  7. Independent Component Analysis applied to Ground-based observations

    NASA Astrophysics Data System (ADS)

    Martins-Filho, Walter; Griffith, Caitlin; Pearson, Kyle; Waldmann, Ingo; Alvarez-Candal, Alvaro; Zellem, Robert Thomas

    2018-01-01

    Transit measurements of Jovian-sized exoplanetary atmospheres allow one to study the composition of exoplanets, largely independent of the planet’s temperature profile. However, measurements of hot-Jupiter transits must archive a level of accuracy in the flux to determine the spectral modulation of the exoplanetary atmosphere. To accomplish this level of precision, we need to extract systematic errors, and, for ground-based measurements, the effects of Earth’s atmosphere, from signal due to the exoplanet, which is several orders of magnitude smaller. The effects of the terrestrial atmosphere and some of the time-dependent systematic errors of ground-based transit measurements are treated mainly by dividing the host star by a reference star at each wavelength and time step of the transit. Recently, Independent Component Analysis (ICA) have been used to remove systematics effects from the raw data of space-based observations (Waldmann, 2014, 2012; Morello et al., 2016, 2015). ICA is a statistical method born from the ideas of the blind-source separations studies, which can be used to de-trend several independent source signals of a data set (Hyvarinen and Oja, 2000). This technique requires no additional prior knowledge of the data set. In addition, this technique has the advantage of requiring no reference star. Here we apply the ICA to ground-based photometry of the exoplanet XO-2b recorded by the 61” Kuiper Telescope and compare the results of the ICA to those of a previous analysis from Zellem et al. (2015), which does not use ICA. We also simulate the effects of various conditions (concerning the systematic errors, noise and the stability of object on the detector) to determine the conditions under which an ICA can be used with high precision to extract the light curve of exoplanetary photometry measurements

  8. Independent Component Analysis applied to Ground-based observations

    NASA Astrophysics Data System (ADS)

    Martins-Filho, Walter; Griffith, Caitlin Ann; Pearson, Kyle; Waldmann, Ingo; Alvarez-Candal, Alvaro; Zellem, Robert

    2017-10-01

    Transit measurements of Jovian-sized exoplanetary atmospheres allow one to study the composition of exoplanets, largely independent of the planet’s temperature profile. However, measurements of hot-Jupiter transits must archive a level of accuracy in the flux to determine the spectral modulations of the exoplanetary atmosphere. To accomplish this level of precision, we need to extract systematic errors, and, for ground-based measurements, the effects of Earth’s atmosphere, from signal due to the exoplanet, which is several orders of magnitudes smaller.The effects of the terrestrial atmosphere and some of the time dependent systematic errors of ground-based transit measurements are treated mainly by dividing the host star by a reference star at each wavelength and time step of the transit. Recently, Independent Component Analyses (ICA) have been used to remove systematics effects from the raw data of space-based observations (Waldmann, 2014, 2012; Morello et al., 2016, 2015). ICA is a statistical method born from the ideas of the blind-source separations studies, which can be used to de-trend several independent source signals of a data set (Hyvarinen and Oja, 2000). This technique requires no additional prior knowledge of the data set. In addition this technique has the advantage of requiring no reference star.Here we apply the ICA to ground-based photometry of the exoplanet XO-2b recorded by the 61” Kuiper Telescope and compare the results of the ICA to those of a previous analysis from Zellem et al. (2015), which does not use ICA. We also simulate the effects of various conditions (concerning the systematic errors, noise and the stability of object on the detector) to determine the conditions under which an ICA can be used with high precision to extract the light curve of exoplanetary photometry measurements.

  9. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yu, Juan; Beltran, Chris J., E-mail: beltran.chris@mayo.edu; Herman, Michael G.

    Purpose: To quantitatively and systematically assess dosimetric effects induced by spot positioning error as a function of spot spacing (SS) on intensity-modulated proton therapy (IMPT) plan quality and to facilitate evaluation of safety tolerance limits on spot position. Methods: Spot position errors (PE) ranging from 1 to 2 mm were simulated. Simple plans were created on a water phantom, and IMPT plans were calculated on two pediatric patients with a brain tumor of 28 and 3 cc, respectively, using a commercial planning system. For the phantom, a uniform dose was delivered to targets located at different depths from 10 tomore » 20 cm with various field sizes from 2{sup 2} to 15{sup 2} cm{sup 2}. Two nominal spot sizes, 4.0 and 6.6 mm of 1 σ in water at isocenter, were used for treatment planning. The SS ranged from 0.5 σ to 1.5 σ, which is 2–6 mm for the small spot size and 3.3–9.9 mm for the large spot size. Various perturbation scenarios of a single spot error and systematic and random multiple spot errors were studied. To quantify the dosimetric effects, percent dose error (PDE) depth profiles and the value of percent dose error at the maximum dose difference (PDE [ΔDmax]) were used for evaluation. Results: A pair of hot and cold spots was created per spot shift. PDE[ΔDmax] is found to be a complex function of PE, SS, spot size, depth, and global spot distribution that can be well defined in simple models. For volumetric targets, the PDE [ΔDmax] is not noticeably affected by the change of field size or target volume within the studied ranges. In general, reducing SS decreased the dose error. For the facility studied, given a single spot error with a PE of 1.2 mm and for both spot sizes, a SS of 1σ resulted in a 2% maximum dose error; a SS larger than 1.25 σ substantially increased the dose error and its sensitivity to PE. A similar trend was observed in multiple spot errors (both systematic and random errors). Systematic PE can lead to noticeable hot spots along the field edges, which may be near critical structures. However, random PE showed minimal dose error. Conclusions: Dose error dependence for PE was quantitatively and systematically characterized and an analytic tool was built to simulate systematic and random errors for patient-specific IMPT. This information facilitates the determination of facility specific spot position error thresholds.« less

  10. Error Modeling of Multi-baseline Optical Truss. Part II; Application to SIM Metrology Truss Field Dependent Error

    NASA Technical Reports Server (NTRS)

    Zhang, Liwei Dennis; Milman, Mark; Korechoff, Robert

    2004-01-01

    The current design of the Space Interferometry Mission (SIM) employs a 19 laser-metrology-beam system (also called L19 external metrology truss) to monitor changes of distances between the fiducials of the flight system's multiple baselines. The function of the external metrology truss is to aid in the determination of the time-variations of the interferometer baseline. The largest contributor to truss error occurs in SIM wide-angle observations when the articulation of the siderostat mirrors (in order to gather starlight from different sky coordinates) brings to light systematic errors due to offsets at levels of instrument components (which include comer cube retro-reflectors, etc.). This error is labeled external metrology wide-angle field-dependent error. Physics-based model of field-dependent error at single metrology gauge level is developed and linearly propagated to errors in interferometer delay. In this manner delay error sensitivity to various error parameters or their combination can be studied using eigenvalue/eigenvector analysis. Also validation of physics-based field-dependent model on SIM testbed lends support to the present approach. As a first example, dihedral error model is developed for the comer cubes (CC) attached to the siderostat mirrors. Then the delay errors due to this effect can be characterized using the eigenvectors of composite CC dihedral error. The essence of the linear error model is contained in an error-mapping matrix. A corresponding Zernike component matrix approach is developed in parallel, first for convenience of describing the RMS of errors across the field-of-regard (FOR), and second for convenience of combining with additional models. Average and worst case residual errors are computed when various orders of field-dependent terms are removed from the delay error. Results of the residual errors are important in arriving at external metrology system component requirements. Double CCs with ideally co-incident vertices reside with the siderostat. The non-common vertex error (NCVE) is treated as a second example. Finally combination of models, and various other errors are discussed.

  11. Systematics for checking geometric errors in CNC lathes

    NASA Astrophysics Data System (ADS)

    Araújo, R. P.; Rolim, T. L.

    2015-10-01

    Non-idealities presented in machine tools compromise directly both the geometry and the dimensions of machined parts, generating distortions in the project. Given the competitive scenario among different companies, it is necessary to have knowledge of the geometric behavior of these machines in order to be able to establish their processing capability, avoiding waste of time and materials as well as satisfying customer requirements. But despite the fact that geometric tests are important and necessary to clarify the use of the machine correctly, therefore preventing future damage, most users do not apply such tests on their machines for lack of knowledge or lack of proper motivation, basically due to two factors: long period of time and high costs of testing. This work proposes a systematics for checking straightness and perpendicularity errors in CNC lathes demanding little time and cost with high metrological reliability, to be used on factory floors of small and medium-size businesses to ensure the quality of its products and make them competitive.

  12. Crab Pulsar Astrometry and Spin-Velocity Alignment

    NASA Astrophysics Data System (ADS)

    Romani, Roger W.; Ng, C.-Y.

    2009-01-01

    The proper motion of the Crab pulsar and its orientation with respect to the PWN symmetry axis is interesting for testing models of neutron star birth kicks. A number of authors have measured the Crab's motion using archival HST images. The most detailed study by Kaplan et al. (2008) compares a wide range of WFPC and ACS images to obtain an accurate proper motion measurement. However, they concluded that a kick comparison is fundamentally limited by the uncertainty in the progenitor's motion. Here we report on new HST images matched to 1994 and 1995 data frames, providing independent proper motion measurement with over 13 year time base and minimal systematic errors. The new observations also allow us to estimate the systematic errors due to CCD saturation. Our preliminary result indicates a proper motion consistent with Kaplan et al.'s finding. We discuss a model for the progenitor's motion, suggesting that the pulsar spin is much closer to alignment than previously suspected.

  13. Systematic and statistical uncertainties in simulated r-process abundances due to uncertain nuclear masses

    DOE PAGES

    Surman, Rebecca; Mumpower, Matthew; McLaughlin, Gail

    2017-02-27

    Unknown nuclear masses are a major source of nuclear physics uncertainty for r-process nucleosynthesis calculations. Here we examine the systematic and statistical uncertainties that arise in r-process abundance predictions due to uncertainties in the masses of nuclear species on the neutron-rich side of stability. There is a long history of examining systematic uncertainties by the application of a variety of different mass models to r-process calculations. Here we expand upon such efforts by examining six DFT mass models, where we capture the full impact of each mass model by updating the other nuclear properties — including neutron capture rates, β-decaymore » lifetimes, and β-delayed neutron emission probabilities — that depend on the masses. Unlike systematic effects, statistical uncertainties in the r-process pattern have just begun to be explored. Here we apply a global Monte Carlo approach, starting from the latest FRDM masses and considering random mass variations within the FRDM rms error. Here, we find in each approach that uncertain nuclear masses produce dramatic uncertainties in calculated r-process yields, which can be reduced in upcoming experimental campaigns.« less

  14. Systematic and statistical uncertainties in simulated r-process abundances due to uncertain nuclear masses

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Surman, Rebecca; Mumpower, Matthew; McLaughlin, Gail

    Unknown nuclear masses are a major source of nuclear physics uncertainty for r-process nucleosynthesis calculations. Here we examine the systematic and statistical uncertainties that arise in r-process abundance predictions due to uncertainties in the masses of nuclear species on the neutron-rich side of stability. There is a long history of examining systematic uncertainties by the application of a variety of different mass models to r-process calculations. Here we expand upon such efforts by examining six DFT mass models, where we capture the full impact of each mass model by updating the other nuclear properties — including neutron capture rates, β-decaymore » lifetimes, and β-delayed neutron emission probabilities — that depend on the masses. Unlike systematic effects, statistical uncertainties in the r-process pattern have just begun to be explored. Here we apply a global Monte Carlo approach, starting from the latest FRDM masses and considering random mass variations within the FRDM rms error. Here, we find in each approach that uncertain nuclear masses produce dramatic uncertainties in calculated r-process yields, which can be reduced in upcoming experimental campaigns.« less

  15. Systematic and random variations in digital Thematic Mapper data

    NASA Technical Reports Server (NTRS)

    Duggin, M. J. (Principal Investigator); Sakhavat, H.

    1985-01-01

    Radiance recorded by any remote sensing instrument will contain noise which will consist of both systematic and random variations. Systematic variations may be due to sun-target-sensor geometry, atmospheric conditions, and the interaction of the spectral characteristics of the sensor with those of upwelling radiance. Random variations in the data may be caused by variations in the nature and in the heterogeneity of the ground cover, by variations in atmospheric transmission, and by the interaction of these variations with the sensing device. It is important to be aware of the extent of random and systematic errors in recorded radiance data across ostensibly uniform ground areas in order to assess the impact on quantative image analysis procedures for both the single date and the multidate cases. It is the intention here to examine the systematic and the random variations in digital radiance data recorded in each band by the thematic mapper over crop areas which are ostensibly uniform and which are free from visible cloud.

  16. Optics measurement algorithms and error analysis for the proton energy frontier

    NASA Astrophysics Data System (ADS)

    Langner, A.; Tomás, R.

    2015-03-01

    Optics measurement algorithms have been improved in preparation for the commissioning of the LHC at higher energy, i.e., with an increased damage potential. Due to machine protection considerations the higher energy sets tighter limits in the maximum excitation amplitude and the total beam charge, reducing the signal to noise ratio of optics measurements. Furthermore the precision in 2012 (4 TeV) was insufficient to understand beam size measurements and determine interaction point (IP) β -functions (β*). A new, more sophisticated algorithm has been developed which takes into account both the statistical and systematic errors involved in this measurement. This makes it possible to combine more beam position monitor measurements for deriving the optical parameters and demonstrates to significantly improve the accuracy and precision. Measurements from the 2012 run have been reanalyzed which, due to the improved algorithms, result in a significantly higher precision of the derived optical parameters and decreased the average error bars by a factor of three to four. This allowed the calculation of β* values and demonstrated to be fundamental in the understanding of emittance evolution during the energy ramp.

  17. Addressing Systematic Errors in Correlation Tracking on HMI Magnetograms

    NASA Astrophysics Data System (ADS)

    Mahajan, Sushant S.; Hathaway, David H.; Munoz-Jaramillo, Andres; Martens, Petrus C.

    2017-08-01

    Correlation tracking in solar magnetograms is an effective method to measure the differential rotation and meridional flow on the solar surface. However, since the tracking accuracy required to successfully measure meridional flow is very high, small systematic errors have a noticeable impact on measured meridional flow profiles. Additionally, the uncertainties of this kind of measurements have been historically underestimated, leading to controversy regarding flow profiles at high latitudes extracted from measurements which are unreliable near the solar limb.Here we present a set of systematic errors we have identified (and potential solutions), including bias caused by physical pixel sizes, center-to-limb systematics, and discrepancies between measurements performed using different time intervals. We have developed numerical techniques to get rid of these systematic errors and in the process improve the accuracy of the measurements by an order of magnitude.We also present a detailed analysis of uncertainties in these measurements using synthetic magnetograms and the quantification of an upper limit below which meridional flow measurements cannot be trusted as a function of latitude.

  18. Selection Bias in Students' Evaluation of Teaching: Causes of Student Absenteeism and Its Consequences for Course Ratings and Rankings

    ERIC Educational Resources Information Center

    Wolbring, Tobias; Treischl, Edgar

    2016-01-01

    Systematic sampling error due to self-selection is a common topic in methodological research and a key challenge for every empirical study. Since selection bias is often not sufficiently considered as a potential flaw in research on and evaluations in higher education, the aim of this paper is to raise awareness for the topic using the case of…

  19. Bayesian refinement of protein structures and ensembles against SAXS data using molecular dynamics

    PubMed Central

    Shevchuk, Roman; Hub, Jochen S.

    2017-01-01

    Small-angle X-ray scattering is an increasingly popular technique used to detect protein structures and ensembles in solution. However, the refinement of structures and ensembles against SAXS data is often ambiguous due to the low information content of SAXS data, unknown systematic errors, and unknown scattering contributions from the solvent. We offer a solution to such problems by combining Bayesian inference with all-atom molecular dynamics simulations and explicit-solvent SAXS calculations. The Bayesian formulation correctly weights the SAXS data versus prior physical knowledge, it quantifies the precision or ambiguity of fitted structures and ensembles, and it accounts for unknown systematic errors due to poor buffer matching. The method further provides a probabilistic criterion for identifying the number of states required to explain the SAXS data. The method is validated by refining ensembles of a periplasmic binding protein against calculated SAXS curves. Subsequently, we derive the solution ensembles of the eukaryotic chaperone heat shock protein 90 (Hsp90) against experimental SAXS data. We find that the SAXS data of the apo state of Hsp90 is compatible with a single wide-open conformation, whereas the SAXS data of Hsp90 bound to ATP or to an ATP-analogue strongly suggest heterogenous ensembles of a closed and a wide-open state. PMID:29045407

  20. Mathematical foundations of hybrid data assimilation from a synchronization perspective

    NASA Astrophysics Data System (ADS)

    Penny, Stephen G.

    2017-12-01

    The state-of-the-art data assimilation methods used today in operational weather prediction centers around the world can be classified as generalized one-way coupled impulsive synchronization. This classification permits the investigation of hybrid data assimilation methods, which combine dynamic error estimates of the system state with long time-averaged (climatological) error estimates, from a synchronization perspective. Illustrative results show how dynamically informed formulations of the coupling matrix (via an Ensemble Kalman Filter, EnKF) can lead to synchronization when observing networks are sparse and how hybrid methods can lead to synchronization when those dynamic formulations are inadequate (due to small ensemble sizes). A large-scale application with a global ocean general circulation model is also presented. Results indicate that the hybrid methods also have useful applications in generalized synchronization, in particular, for correcting systematic model errors.

  1. Optimal architectures for long distance quantum communication.

    PubMed

    Muralidharan, Sreraman; Li, Linshu; Kim, Jungsang; Lütkenhaus, Norbert; Lukin, Mikhail D; Jiang, Liang

    2016-02-15

    Despite the tremendous progress of quantum cryptography, efficient quantum communication over long distances (≥ 1000 km) remains an outstanding challenge due to fiber attenuation and operation errors accumulated over the entire communication distance. Quantum repeaters (QRs), as a promising approach, can overcome both photon loss and operation errors, and hence significantly speedup the communication rate. Depending on the methods used to correct loss and operation errors, all the proposed QR schemes can be classified into three categories (generations). Here we present the first systematic comparison of three generations of quantum repeaters by evaluating the cost of both temporal and physical resources, and identify the optimized quantum repeater architecture for a given set of experimental parameters for use in quantum key distribution. Our work provides a roadmap for the experimental realizations of highly efficient quantum networks over transcontinental distances.

  2. Optimal architectures for long distance quantum communication

    PubMed Central

    Muralidharan, Sreraman; Li, Linshu; Kim, Jungsang; Lütkenhaus, Norbert; Lukin, Mikhail D.; Jiang, Liang

    2016-01-01

    Despite the tremendous progress of quantum cryptography, efficient quantum communication over long distances (≥1000 km) remains an outstanding challenge due to fiber attenuation and operation errors accumulated over the entire communication distance. Quantum repeaters (QRs), as a promising approach, can overcome both photon loss and operation errors, and hence significantly speedup the communication rate. Depending on the methods used to correct loss and operation errors, all the proposed QR schemes can be classified into three categories (generations). Here we present the first systematic comparison of three generations of quantum repeaters by evaluating the cost of both temporal and physical resources, and identify the optimized quantum repeater architecture for a given set of experimental parameters for use in quantum key distribution. Our work provides a roadmap for the experimental realizations of highly efficient quantum networks over transcontinental distances. PMID:26876670

  3. Optimal architectures for long distance quantum communication

    NASA Astrophysics Data System (ADS)

    Muralidharan, Sreraman; Li, Linshu; Kim, Jungsang; Lütkenhaus, Norbert; Lukin, Mikhail D.; Jiang, Liang

    2016-02-01

    Despite the tremendous progress of quantum cryptography, efficient quantum communication over long distances (≥1000 km) remains an outstanding challenge due to fiber attenuation and operation errors accumulated over the entire communication distance. Quantum repeaters (QRs), as a promising approach, can overcome both photon loss and operation errors, and hence significantly speedup the communication rate. Depending on the methods used to correct loss and operation errors, all the proposed QR schemes can be classified into three categories (generations). Here we present the first systematic comparison of three generations of quantum repeaters by evaluating the cost of both temporal and physical resources, and identify the optimized quantum repeater architecture for a given set of experimental parameters for use in quantum key distribution. Our work provides a roadmap for the experimental realizations of highly efficient quantum networks over transcontinental distances.

  4. Mathematical foundations of hybrid data assimilation from a synchronization perspective.

    PubMed

    Penny, Stephen G

    2017-12-01

    The state-of-the-art data assimilation methods used today in operational weather prediction centers around the world can be classified as generalized one-way coupled impulsive synchronization. This classification permits the investigation of hybrid data assimilation methods, which combine dynamic error estimates of the system state with long time-averaged (climatological) error estimates, from a synchronization perspective. Illustrative results show how dynamically informed formulations of the coupling matrix (via an Ensemble Kalman Filter, EnKF) can lead to synchronization when observing networks are sparse and how hybrid methods can lead to synchronization when those dynamic formulations are inadequate (due to small ensemble sizes). A large-scale application with a global ocean general circulation model is also presented. Results indicate that the hybrid methods also have useful applications in generalized synchronization, in particular, for correcting systematic model errors.

  5. The Thirty Gigahertz Instrument Receiver for the QUIJOTE Experiment: Preliminary Polarization Measurements and Systematic-Error Analysis.

    PubMed

    Casas, Francisco J; Ortiz, David; Villa, Enrique; Cano, Juan L; Cagigas, Jaime; Pérez, Ana R; Aja, Beatriz; Terán, J Vicente; de la Fuente, Luisa; Artal, Eduardo; Hoyland, Roger; Génova-Santos, Ricardo

    2015-08-05

    This paper presents preliminary polarization measurements and systematic-error characterization of the Thirty Gigahertz Instrument receiver developed for the QUIJOTE experiment. The instrument has been designed to measure the polarization of Cosmic Microwave Background radiation from the sky, obtaining the Q, U, and I Stokes parameters of the incoming signal simultaneously. Two kinds of linearly polarized input signals have been used as excitations in the polarimeter measurement tests in the laboratory; these show consistent results in terms of the Stokes parameters obtained. A measurement-based systematic-error characterization technique has been used in order to determine the possible sources of instrumental errors and to assist in the polarimeter calibration process.

  6. Assessment of Systematic Measurement Errors for Acoustic Travel-Time Tomography of the Atmosphere

    DTIC Science & Technology

    2013-01-01

    measurements include assess- ment of the time delays in electronic circuits and mechanical hardware (e.g., drivers and microphones) of a tomography array ...hardware and electronic circuits of the tomography array and errors in synchronization of the transmitted and recorded signals. For example, if...coordinates can be as large as 30 cm. These errors are equivalent to the systematic errors in the travel times of 0.9 ms. Third, loudspeakers which are used

  7. DtaRefinery: a software tool for elimination of systematic errors from parent ion mass measurements in tandem mass spectra datasets

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Petyuk, Vladislav A.; Mayampurath, Anoop M.; Monroe, Matthew E.

    2009-12-16

    Hybrid two-stage mass spectrometers capable of both highly accurate mass measurement and MS/MS fragmentation have become widely available in recent years and have allowed for sig-nificantly better discrimination between true and false MS/MS pep-tide identifications by applying relatively narrow windows for maxi-mum allowable deviations for parent ion mass measurements. To fully gain the advantage of highly accurate parent ion mass meas-urements, it is important to limit systematic mass measurement errors. The DtaRefinery software tool can correct systematic errors in parent ion masses by reading a set of fragmentation spectra, searching for MS/MS peptide identifications, then fitting a model that canmore » estimate systematic errors, and removing them. This results in a new fragmentation spectrum file with updated parent ion masses.« less

  8. Bias estimation for the Landsat 8 operational land imager

    USGS Publications Warehouse

    Morfitt, Ron; Vanderwerff, Kelly

    2011-01-01

    The Operational Land Imager (OLI) is a pushbroom sensor that will be a part of the Landsat Data Continuity Mission (LDCM). This instrument is the latest in the line of Landsat imagers, and will continue to expand the archive of calibrated earth imagery. An important step in producing a calibrated image from instrument data is accurately accounting for the bias of the imaging detectors. Bias variability is one factor that contributes to error in bias estimation for OLI. Typically, the bias is simply estimated by averaging dark data on a per-detector basis. However, data acquired during OLI pre-launch testing exhibited bias variation that correlated well with the variation in concurrently collected data from a special set of detectors on the focal plane. These detectors are sensitive to certain electronic effects but not directly to incoming electromagnetic radiation. A method of using data from these special detectors to estimate the bias of the imaging detectors was developed, but found not to be beneficial at typical radiance levels as the detectors respond slightly when the focal plane is illuminated. In addition to bias variability, a systematic bias error is introduced by the truncation performed by the spacecraft of the 14-bit instrument data to 12-bit integers. This systematic error can be estimated and removed on average, but the per pixel quantization error remains. This paper describes the variability of the bias, the effectiveness of a new approach to estimate and compensate for it, as well as the errors due to truncation and how they are reduced.

  9. Analysis of GRACE Range-rate Residuals with Emphasis on Reprocessed Star-Camera Datasets

    NASA Astrophysics Data System (ADS)

    Goswami, S.; Flury, J.; Naeimi, M.; Bandikova, T.; Guerr, T. M.; Klinger, B.

    2015-12-01

    Since March 2002 the two GRACE satellites orbit the Earth at rela-tively low altitude. Determination of the gravity field of the Earth including itstemporal variations from the satellites' orbits and the inter-satellite measure-ments is the goal of the mission. Yet, the time-variable gravity signal has notbeen fully exploited. This can be seen better in the computed post-fit range-rateresiduals. The errors reflected in the range-rate residuals are due to the differ-ent sources as systematic errors, mismodelling errors and tone errors. Here, weanalyse the effect of three different star-camera data sets on the post-fit range-rate residuals. On the one hand, we consider the available attitude data andon other hand we take the two different data sets which has been reprocessedat Institute of Geodesy, Hannover and Institute of Theoretical Geodesy andSatellite Geodesy, TU Graz Austria respectively. Then the differences in therange-rate residuals computed from different attitude dataset are analyzed inthis study. Details will be given and results will be discussed.

  10. Error model of geomagnetic-field measurement and extended Kalman-filter based compensation method

    PubMed Central

    Ge, Zhilei; Liu, Suyun; Li, Guopeng; Huang, Yan; Wang, Yanni

    2017-01-01

    The real-time accurate measurement of the geomagnetic-field is the foundation to achieving high-precision geomagnetic navigation. The existing geomagnetic-field measurement models are essentially simplified models that cannot accurately describe the sources of measurement error. This paper, on the basis of systematically analyzing the source of geomagnetic-field measurement error, built a complete measurement model, into which the previously unconsidered geomagnetic daily variation field was introduced. This paper proposed an extended Kalman-filter based compensation method, which allows a large amount of measurement data to be used in estimating parameters to obtain the optimal solution in the sense of statistics. The experiment results showed that the compensated strength of the geomagnetic field remained close to the real value and the measurement error was basically controlled within 5nT. In addition, this compensation method has strong applicability due to its easy data collection and ability to remove the dependence on a high-precision measurement instrument. PMID:28445508

  11. A Systems Modeling Approach for Risk Management of Command File Errors

    NASA Technical Reports Server (NTRS)

    Meshkat, Leila

    2012-01-01

    The main cause of commanding errors is often (but not always) due to procedures. Either lack of maturity in the processes, incompleteness of requirements or lack of compliance to these procedures. Other causes of commanding errors include lack of understanding of system states, inadequate communication, and making hasty changes in standard procedures in response to an unexpected event. In general, it's important to look at the big picture prior to making corrective actions. In the case of errors traced back to procedures, considering the reliability of the process as a metric during its' design may help to reduce risk. This metric is obtained by using data from Nuclear Industry regarding human reliability. A structured method for the collection of anomaly data will help the operator think systematically about the anomaly and facilitate risk management. Formal models can be used for risk based design and risk management. A generic set of models can be customized for a broad range of missions.

  12. Method and apparatus for measuring lung density by Compton backscattering

    DOEpatents

    Loo, Billy W.; Goulding, Frederick S.

    1991-01-01

    The density of the lung of a patient suffering from pulmonary edema is monitored by irradiating the lung by a single collimated beam of monochromatic photons and measuring the energies of photons Compton backscattered from the lung by a single high-resolution, high-purity germanium detector. A compact system geometry and a unique data extraction scheme are utilized to monimize systematic errors due to the presence of the chestwall and multiple scattering.

  13. An analysis of errors in special sensor microwave imager evaporation estimates over the global oceans

    NASA Technical Reports Server (NTRS)

    Esbensen, S. K.; Chelton, D. B.; Vickers, D.; Sun, J.

    1993-01-01

    The method proposed by Liu (1984) is used to estimate monthly averaged evaporation over the global oceans from 1 yr of special sensor microwave imager (SDSM/I) data. Intercomparisons involving SSM/I and in situ data are made over a wide range of oceanic conditions during August 1987 and February 1988 to determine the source of errors in the evaporation estimates. The most significant spatially coherent evaporation errors are found to come from estimates of near-surface specific humidity, q. Systematic discrepancies of over 2 g/kg are found in the tropics, as well as in the middle and high latitudes. The q errors are partitioned into contributions from the parameterization of q in terms of the columnar water vapor, i.e., the Liu q/W relationship, and from the retrieval algorithm for W. The effects of W retrieval errors are found to be smaller over most of the global oceans and due primarily to the implicitly assumed vertical structures of temperature and specific humidity on which the physically based SSM/I retrievals of W are based.

  14. The Thirty Gigahertz Instrument Receiver for the QUIJOTE Experiment: Preliminary Polarization Measurements and Systematic-Error Analysis

    PubMed Central

    Casas, Francisco J.; Ortiz, David; Villa, Enrique; Cano, Juan L.; Cagigas, Jaime; Pérez, Ana R.; Aja, Beatriz; Terán, J. Vicente; de la Fuente, Luisa; Artal, Eduardo; Hoyland, Roger; Génova-Santos, Ricardo

    2015-01-01

    This paper presents preliminary polarization measurements and systematic-error characterization of the Thirty Gigahertz Instrument receiver developed for the QUIJOTE experiment. The instrument has been designed to measure the polarization of Cosmic Microwave Background radiation from the sky, obtaining the Q, U, and I Stokes parameters of the incoming signal simultaneously. Two kinds of linearly polarized input signals have been used as excitations in the polarimeter measurement tests in the laboratory; these show consistent results in terms of the Stokes parameters obtained. A measurement-based systematic-error characterization technique has been used in order to determine the possible sources of instrumental errors and to assist in the polarimeter calibration process. PMID:26251906

  15. Refractive Errors and Concomitant Strabismus: A Systematic Review and Meta-analysis.

    PubMed

    Tang, Shu Min; Chan, Rachel Y T; Bin Lin, Shi; Rong, Shi Song; Lau, Henry H W; Lau, Winnie W Y; Yip, Wilson W K; Chen, Li Jia; Ko, Simon T C; Yam, Jason C S

    2016-10-12

    This systematic review and meta-analysis is to evaluate the risk of development of concomitant strabismus due to refractive errors. Eligible studies published from 1946 to April 1, 2016 were identified from MEDLINE and EMBASE that evaluated any kinds of refractive errors (myopia, hyperopia, astigmatism and anisometropia) as an independent factor for concomitant exotropia and concomitant esotropia. Totally 5065 published records were retrieved for screening, 157 of them eligible for detailed evaluation. Finally 7 population-based studies involving 23,541 study subjects met our criteria for meta-analysis. The combined OR showed that myopia was a risk factor for exotropia (OR: 5.23, P = 0.0001). We found hyperopia had a dose-related effect for esotropia (OR for a spherical equivalent [SE] of 2-3 diopters [D]: 10.16, P = 0.01; OR for an SE of 3-4D: 17.83, P < 0.0001; OR for an SE of 4-5D: 41.01, P < 0.0001; OR for an SE of ≥5D: 162.68, P < 0.0001). Sensitivity analysis indicated our results were robust. Results of this study confirmed myopia as a risk for concomitant exotropia and identified a dose-related effect for hyperopia as a risk of concomitant esotropia.

  16. Refractive Errors and Concomitant Strabismus: A Systematic Review and Meta-analysis

    PubMed Central

    Tang, Shu Min; Chan, Rachel Y. T.; Bin Lin, Shi; Rong, Shi Song; Lau, Henry H. W.; Lau, Winnie W. Y.; Yip, Wilson W. K.; Chen, Li Jia; Ko, Simon T. C.; Yam, Jason C. S.

    2016-01-01

    This systematic review and meta-analysis is to evaluate the risk of development of concomitant strabismus due to refractive errors. Eligible studies published from 1946 to April 1, 2016 were identified from MEDLINE and EMBASE that evaluated any kinds of refractive errors (myopia, hyperopia, astigmatism and anisometropia) as an independent factor for concomitant exotropia and concomitant esotropia. Totally 5065 published records were retrieved for screening, 157 of them eligible for detailed evaluation. Finally 7 population-based studies involving 23,541 study subjects met our criteria for meta-analysis. The combined OR showed that myopia was a risk factor for exotropia (OR: 5.23, P = 0.0001). We found hyperopia had a dose-related effect for esotropia (OR for a spherical equivalent [SE] of 2–3 diopters [D]: 10.16, P = 0.01; OR for an SE of 3-4D: 17.83, P < 0.0001; OR for an SE of 4-5D: 41.01, P < 0.0001; OR for an SE of ≥5D: 162.68, P < 0.0001). Sensitivity analysis indicated our results were robust. Results of this study confirmed myopia as a risk for concomitant exotropia and identified a dose-related effect for hyperopia as a risk of concomitant esotropia. PMID:27731389

  17. A study for systematic errors of the GLA forecast model in tropical regions

    NASA Technical Reports Server (NTRS)

    Chen, Tsing-Chang; Baker, Wayman E.; Pfaendtner, James; Corrigan, Martin

    1988-01-01

    From the sensitivity studies performed with the Goddard Laboratory for Atmospheres (GLA) analysis/forecast system, it was revealed that the forecast errors in the tropics affect the ability to forecast midlatitude weather in some cases. Apparently, the forecast errors occurring in the tropics can propagate to midlatitudes. Therefore, the systematic error analysis of the GLA forecast system becomes a necessary step in improving the model's forecast performance. The major effort of this study is to examine the possible impact of the hydrological-cycle forecast error on dynamical fields in the GLA forecast system.

  18. Determination of the precision error of the pulmonary artery thermodilution catheter using an in vitro continuous flow test rig.

    PubMed

    Yang, Xiao-Xing; Critchley, Lester A; Joynt, Gavin M

    2011-01-01

    Thermodilution cardiac output using a pulmonary artery catheter is the reference method against which all new methods of cardiac output measurement are judged. However, thermodilution lacks precision and has a quoted precision error of ± 20%. There is uncertainty about its true precision and this causes difficulty when validating new cardiac output technology. Our aim in this investigation was to determine the current precision error of thermodilution measurements. A test rig through which water circulated at different constant rates with ports to insert catheters into a flow chamber was assembled. Flow rate was measured by an externally placed transonic flowprobe and meter. The meter was calibrated by timed filling of a cylinder. Arrow and Edwards 7Fr thermodilution catheters, connected to a Siemens SC9000 cardiac output monitor, were tested. Thermodilution readings were made by injecting 5 mL of ice-cold water. Precision error was divided into random and systematic components, which were determined separately. Between-readings (random) variability was determined for each catheter by taking sets of 10 readings at different flow rates. Coefficient of variation (CV) was calculated for each set and averaged. Between-catheter systems (systematic) variability was derived by plotting calibration lines for sets of catheters. Slopes were used to estimate the systematic component. Performances of 3 cardiac output monitors were compared: Siemens SC9000, Siemens Sirecust 1261, and Philips MP50. Five Arrow and 5 Edwards catheters were tested using the Siemens SC9000 monitor. Flow rates between 0.7 and 7.0 L/min were studied. The CV (random error) for Arrow was 5.4% and for Edwards was 4.8%. The random precision error was ± 10.0% (95% confidence limits). CV (systematic error) was 5.8% and 6.0%, respectively. The systematic precision error was ± 11.6%. The total precision error of a single thermodilution reading was ± 15.3% and ± 13.0% for triplicate readings. Precision error increased by 45% when using the Sirecust monitor and 100% when using the Philips monitor. In vitro testing of pulmonary artery catheters enabled us to measure both the random and systematic error components of thermodilution cardiac output measurement, and thus calculate the precision error. Using the Siemens monitor, we established a precision error of ± 15.3% for single and ± 13.0% for triplicate reading, which was similar to the previous estimate of ± 20%. However, this precision error was significantly worsened by using the Sirecust and Philips monitors. Clinicians should recognize that the precision error of thermodilution cardiac output is dependent on the selection of catheter and monitor model.

  19. Measurement error is often neglected in medical literature: a systematic review.

    PubMed

    Brakenhoff, Timo B; Mitroiu, Marian; Keogh, Ruth H; Moons, Karel G M; Groenwold, Rolf H H; van Smeden, Maarten

    2018-06-01

    In medical research, covariates (e.g., exposure and confounder variables) are often measured with error. While it is well accepted that this introduces bias and imprecision in exposure-outcome relations, it is unclear to what extent such issues are currently considered in research practice. The objective was to study common practices regarding covariate measurement error via a systematic review of general medicine and epidemiology literature. Original research published in 2016 in 12 high impact journals was full-text searched for phrases relating to measurement error. Reporting of measurement error and methods to investigate or correct for it were quantified and characterized. Two hundred and forty-seven (44%) of the 565 original research publications reported on the presence of measurement error. 83% of these 247 did so with respect to the exposure and/or confounder variables. Only 18 publications (7% of 247) used methods to investigate or correct for measurement error. Consequently, it is difficult for readers to judge the robustness of presented results to the existence of measurement error in the majority of publications in high impact journals. Our systematic review highlights the need for increased awareness about the possible impact of covariate measurement error. Additionally, guidance on the use of measurement error correction methods is necessary. Copyright © 2018 Elsevier Inc. All rights reserved.

  20. Wavefront-aberration measurement and systematic-error analysis of a high numerical-aperture objective

    NASA Astrophysics Data System (ADS)

    Liu, Zhixiang; Xing, Tingwen; Jiang, Yadong; Lv, Baobin

    2018-02-01

    A two-dimensional (2-D) shearing interferometer based on an amplitude chessboard grating was designed to measure the wavefront aberration of a high numerical-aperture (NA) objective. Chessboard gratings offer better diffraction efficiencies and fewer disturbing diffraction orders than traditional cross gratings. The wavefront aberration of the tested objective was retrieved from the shearing interferogram using the Fourier transform and differential Zernike polynomial-fitting methods. Grating manufacturing errors, including the duty-cycle and pattern-deviation errors, were analyzed with the Fourier transform method. Then, according to the relation between the spherical pupil and planar detector coordinates, the influence of the distortion of the pupil coordinates was simulated. Finally, the systematic error attributable to grating alignment errors was deduced through the geometrical ray-tracing method. Experimental results indicate that the measuring repeatability (3σ) of the wavefront aberration of an objective with NA 0.4 was 3.4 mλ. The systematic-error results were consistent with previous analyses. Thus, the correct wavefront aberration can be obtained after calibration.

  1. The Systematics of Strong Lens Modeling Quantified: The Effects of Constraint Selection and Redshift Information on Magnification, Mass, and Multiple Image Predictability

    NASA Astrophysics Data System (ADS)

    Johnson, Traci L.; Sharon, Keren

    2016-11-01

    Until now, systematic errors in strong gravitational lens modeling have been acknowledged but have never been fully quantified. Here, we launch an investigation into the systematics induced by constraint selection. We model the simulated cluster Ares 362 times using random selections of image systems with and without spectroscopic redshifts and quantify the systematics using several diagnostics: image predictability, accuracy of model-predicted redshifts, enclosed mass, and magnification. We find that for models with >15 image systems, the image plane rms does not decrease significantly when more systems are added; however, the rms values quoted in the literature may be misleading as to the ability of a model to predict new multiple images. The mass is well constrained near the Einstein radius in all cases, and systematic error drops to <2% for models using >10 image systems. Magnification errors are smallest along the straight portions of the critical curve, and the value of the magnification is systematically lower near curved portions. For >15 systems, the systematic error on magnification is ∼2%. We report no trend in magnification error with the fraction of spectroscopic image systems when selecting constraints at random; however, when using the same selection of constraints, increasing this fraction up to ∼0.5 will increase model accuracy. The results suggest that the selection of constraints, rather than quantity alone, determines the accuracy of the magnification. We note that spectroscopic follow-up of at least a few image systems is crucial because models without any spectroscopic redshifts are inaccurate across all of our diagnostics.

  2. Ratio of He{sup 2+}/He{sup +} from 80 to 800 eV

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Samson, J.A.R.; Stolte, W.C.; He, Z.X.

    1997-04-01

    The importance of studying the double ionization of He by single photons lies in the fact that He presents the simplest structure for the study of electron correlation processes. Even so it has proved a challenging problem to understand and describe theoretically. Surprisingly, it has also proved difficult to agree experimentally on the absolute values of the He{sup 2+}/He{sup +} ratios. The availability of new synchrotron facilities with high intensity light outputs have increased the experimental activity in this area. However, by the very nature of those continuum sources systematic errors occur due to the presence of higher order spectramore » and great care must be exercised. The authors have measured the He{sup 2+}/He{sup +} ratios over a period of 5 years, the last three at the ALS utilizing beamlines 9.0.1 and 6.3.2. The sources of systematic errors that they have considered include: scattered light, higher order spectra, detector sensitivity to differently charged ions, discriminator levels in the counting equipment, gas purity, and stray electrons from filters and metal supports. The measurements have been made at three different synchrotron facilities with different types of monochromators and their potential for different sources of systematic errors. However, the authors data from all these different measurements agree within a few percent of each other. From the above results and their precision total photoionization cross sections for He, the authors can obtain the absolute photoionization cross section for He{sup 2+}. They find similar near perfect agreement with several of the latest calculations.« less

  3. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liu Ke; Li Yanqiu; Wang Hai

    Characterization of measurement accuracy of the phase-shifting point diffraction interferometer (PS/PDI) is usually performed by two-pinhole null test. In this procedure, the geometrical coma and detector tilt astigmatism systematic errors are almost one or two magnitude higher than the desired accuracy of PS/PDI. These errors must be accurately removed from the null test result to achieve high accuracy. Published calibration methods, which can remove the geometrical coma error successfully, have some limitations in calibrating the astigmatism error. In this paper, we propose a method to simultaneously calibrate the geometrical coma and detector tilt astigmatism errors in PS/PDI null test. Basedmore » on the measurement results obtained from two pinhole pairs in orthogonal directions, the method utilizes the orthogonal and rotational symmetry properties of Zernike polynomials over unit circle to calculate the systematic errors introduced in null test of PS/PDI. The experiment using PS/PDI operated at visible light is performed to verify the method. The results show that the method is effective in isolating the systematic errors of PS/PDI and the measurement accuracy of the calibrated PS/PDI is 0.0088{lambda} rms ({lambda}= 632.8 nm).« less

  4. The Association Between Professional Burnout and Engagement With Patient Safety Culture and Outcomes: A Systematic Review.

    PubMed

    Mossburg, Sarah E; Dennison Himmelfarb, Cheryl

    2018-06-25

    In the last 20 years, there have been numerous successful efforts to improve patient safety, although recent research still shows a significant gap. Researchers have begun exploring the impact of individual level factors on patient safety culture and safety outcomes. This review examines the state of the science exploring the impact of professional burnout and engagement on patient safety culture and safety outcomes. A systematic search was conducted in CINAHL, PubMed, and Embase. Studies included reported on the relationships among burnout or engagement and safety culture or safety outcomes. Twenty-two studies met inclusion criteria. Ten studies showed a relationship between both safety culture and clinical errors with burnout. Two of 3 studies reported an association between burnout and patient outcomes. Fewer studies focused on engagement. Most studies exploring engagement and safety culture found a moderately strong positive association. The limited evidence on the relationship between engagement and errors depicts inconsistent findings. Only one study explored engagement and patient outcomes, which failed to find a relationship. The burnout/safety literature should be expanded to a multidisciplinary focus. Mixed results of the relationship between burnout and errors could be due to a disparate relationship with perceived versus observed errors. The engagement/safety literature is immature, although high engagement seems to be associated with high safety culture. Extending this science into safety outcomes would be meaningful, especially in light of the recent focus on an abundance-based approach to safety.

  5. Feedback-tuned, noise resilient gates for encoded spin qubits

    NASA Astrophysics Data System (ADS)

    Bluhm, Hendrik

    Spin 1/2 particles form native two level systems and thus lend themselves as a natural qubit implementation. However, encoding a single qubit in several spins entails benefits, such as reducing the resources necessary for qubit control and protection from certain decoherence channels. While several varieties of such encoded spin qubits have been implemented, accurate control remains challenging, and leakage out of the subspace of valid qubit states is a potential issue. Optimal performance typically requires large pulse amplitudes for fast control, which is prone to systematic errors and prohibits standard control approaches based on Rabi flopping. Furthermore, the exchange interaction typically used to electrically manipulate encoded spin qubits is inherently sensitive to charge noise. I will discuss all-electrical, high-fidelity single qubit operations for a spin qubit encoded in two electrons in a GaAs double quantum dot. Starting from a set of numerically optimized control pulses, we employ an iterative tuning procedure based on measured error syndromes to remove systematic errors.Randomized benchmarking yields an average gate fidelity exceeding 98 % and a leakage rate into invalid states of 0.2 %. These gates exhibit a certain degree of resilience to both slow charge and nuclear spin fluctuations due to dynamical correction analogous to a spin echo. Furthermore, the numerical optimization minimizes the impact of fast charge noise. Both types of noise make relevant contributions to gate errors. The general approach is also adaptable to other qubit encodings and exchange based two-qubit gates.

  6. The causes of and factors associated with prescribing errors in hospital inpatients: a systematic review.

    PubMed

    Tully, Mary P; Ashcroft, Darren M; Dornan, Tim; Lewis, Penny J; Taylor, David; Wass, Val

    2009-01-01

    Prescribing errors are common, they result in adverse events and harm to patients and it is unclear how best to prevent them because recommendations are more often based on surmized rather than empirically collected data. The aim of this systematic review was to identify all informative published evidence concerning the causes of and factors associated with prescribing errors in specialist and non-specialist hospitals, collate it, analyse it qualitatively and synthesize conclusions from it. Seven electronic databases were searched for articles published between 1985-July 2008. The reference lists of all informative studies were searched for additional citations. To be included, a study had to be of handwritten prescriptions for adult or child inpatients that reported empirically collected data on the causes of or factors associated with errors. Publications in languages other than English and studies that evaluated errors for only one disease, one route of administration or one type of prescribing error were excluded. Seventeen papers reporting 16 studies, selected from 1268 papers identified by the search, were included in the review. Studies from the US and the UK in university-affiliated hospitals predominated (10/16 [62%]). The definition of a prescribing error varied widely and the included studies were highly heterogeneous. Causes were grouped according to Reason's model of accident causation into active failures, error-provoking conditions and latent conditions. The active failure most frequently cited was a mistake due to inadequate knowledge of the drug or the patient. Skills-based slips and memory lapses were also common. Where error-provoking conditions were reported, there was at least one per error. These included lack of training or experience, fatigue, stress, high workload for the prescriber and inadequate communication between healthcare professionals. Latent conditions included reluctance to question senior colleagues and inadequate provision of training. Prescribing errors are often multifactorial, with several active failures and error-provoking conditions often acting together to cause them. In the face of such complexity, solutions addressing a single cause, such as lack of knowledge, are likely to have only limited benefit. Further rigorous study, seeking potential ways of reducing error, needs to be conducted. Multifactorial interventions across many parts of the system are likely to be required.

  7. Modeling Systematic Error Effects for a Sensitive Storage Ring EDM Polarimeter

    NASA Astrophysics Data System (ADS)

    Stephenson, Edward; Imig, Astrid

    2009-10-01

    The Storage Ring EDM Collaboration has obtained a set of measurements detailing the sensitivity of a storage ring polarimeter for deuterons to small geometrical and rate changes. Various schemes, such as the calculation of the cross ratio [1], can cancel effects due to detector acceptance differences and luminosity differences for states of opposite polarization. Such schemes fail at second-order in the errors, becoming sensitive to geometrical changes, polarization magnitude differences between opposite polarization states, and changes to the detector response with changing data rates. An expansion of the polarimeter response in a Taylor series based on small errors about the polarimeter operating point can parametrize such effects, primarily in terms of the logarithmic derivatives of the cross section and analyzing power. A comparison will be made to measurements obtained with the EDDA detector at COSY-J"ulich. [4pt] [1] G.G. Ohlsen and P.W. Keaton, Jr., NIM 109, 41 (1973).

  8. Bias, Confounding, and Interaction: Lions and Tigers, and Bears, Oh My!

    PubMed

    Vetter, Thomas R; Mascha, Edward J

    2017-09-01

    Epidemiologists seek to make a valid inference about the causal effect between an exposure and a disease in a specific population, using representative sample data from a specific population. Clinical researchers likewise seek to make a valid inference about the association between an intervention and outcome(s) in a specific population, based upon their randomly collected, representative sample data. Both do so by using the available data about the sample variable to make a valid estimate about its corresponding or underlying, but unknown population parameter. Random error in an experiment can be due to the natural, periodic fluctuation or variation in the accuracy or precision of virtually any data sampling technique or health measurement tool or scale. In a clinical research study, random error can be due to not only innate human variability but also purely chance. Systematic error in an experiment arises from an innate flaw in the data sampling technique or measurement instrument. In the clinical research setting, systematic error is more commonly referred to as systematic bias. The most commonly encountered types of bias in anesthesia, perioperative, critical care, and pain medicine research include recall bias, observational bias (Hawthorne effect), attrition bias, misclassification or informational bias, and selection bias. A confounding variable is a factor associated with both the exposure of interest and the outcome of interest. A confounding variable (confounding factor or confounder) is a variable that correlates (positively or negatively) with both the exposure and outcome. Confounding is typically not an issue in a randomized trial because the randomized groups are sufficiently balanced on all potential confounding variables, both observed and nonobserved. However, confounding can be a major problem with any observational (nonrandomized) study. Ignoring confounding in an observational study will often result in a "distorted" or incorrect estimate of the association or treatment effect. Interaction among variables, also known as effect modification, exists when the effect of 1 explanatory variable on the outcome depends on the particular level or value of another explanatory variable. Bias and confounding are common potential explanations for statistically significant associations between exposure and outcome when the true relationship is noncausal. Understanding interactions is vital to proper interpretation of treatment effects. These complex concepts should be consistently and appropriately considered whenever one is not only designing but also analyzing and interpreting data from a randomized trial or observational study.

  9. Evaluating the Effective Factors for Reporting Medical Errors among Midwives Working at Teaching Hospitals Affiliated to Isfahan University of Medical Sciences.

    PubMed

    Khorasani, Fahimeh; Beigi, Marjan

    2017-01-01

    Recently, evaluation and accreditation system of hospitals has had a special emphasis on reporting malpractices and sharing errors or lessons learnt from errors, but still due to lack of promotion of systematic approach for solving problems from the same system, this issue has remained unattended. This study was conducted to determine the effective factors for reporting medical errors among midwives. This project was a descriptive cross-sectional observational study. Data gathering tools were a standard checklist and two researcher-made questionnaires. Sampling for this study was conducted from all the midwives who worked at teaching hospitals affiliated to Isfahan University of Medical Sciences through census method (convenient) and lasted for 3 months. Data were analyzed using descriptive and inferential statistics through SPSS 16. Results showed that 79.1% of the staff reported errors and the highest rate of errors was in the process of patients' tests. In this study, the mean score of midwives' knowledge about the errors was 79.1 and the mean score of their attitude toward reporting errors was 70.4. There was a direct relation between the score of errors' knowledge and attitude in the midwifery staff and reporting errors. Based on the results of this study about the appropriate knowledge and attitude of midwifery staff regarding errors and action toward reporting them, it is recommended to strengthen the system when it comes to errors and hospitals risks.

  10. Analyse des erreurs et grammaire generative: La syntaxe de l'interrogation en francais (Error Analysis and Generative Grammar: The Syntax of Interrogation in French).

    ERIC Educational Resources Information Center

    Py, Bernard

    A progress report is presented of a study which applies a system of generative grammar to error analysis. The objective of the study was to reconstruct the grammar of students' interlanguage, using a systematic analysis of errors. (Interlanguage refers to the linguistic competence of a student who possesses a relatively systematic body of rules,…

  11. A Novel Approach of Understanding and Incorporating Error of Chemical Transport Models into a Geostatistical Framework

    NASA Astrophysics Data System (ADS)

    Reyes, J.; Vizuete, W.; Serre, M. L.; Xu, Y.

    2015-12-01

    The EPA employs a vast monitoring network to measure ambient PM2.5 concentrations across the United States with one of its goals being to quantify exposure within the population. However, there are several areas of the country with sparse monitoring spatially and temporally. One means to fill in these monitoring gaps is to use PM2.5 modeled estimates from Chemical Transport Models (CTMs) specifically the Community Multi-scale Air Quality (CMAQ) model. CMAQ is able to provide complete spatial coverage but is subject to systematic and random error due to model uncertainty. Due to the deterministic nature of CMAQ, often these uncertainties are not quantified. Much effort is employed to quantify the efficacy of these models through different metrics of model performance. Currently evaluation is specific to only locations with observed data. Multiyear studies across the United States are challenging because the error and model performance of CMAQ are not uniform over such large space/time domains. Error changes regionally and temporally. Because of the complex mix of species that constitute PM2.5, CMAQ error is also a function of increasing PM2.5 concentration. To address this issue we introduce a model performance evaluation for PM2.5 CMAQ that is regionalized and non-linear. This model performance evaluation leads to error quantification for each CMAQ grid. Areas and time periods of error being better qualified. The regionalized error correction approach is non-linear and is therefore more flexible at characterizing model performance than approaches that rely on linearity assumptions and assume homoscedasticity of CMAQ predictions errors. Corrected CMAQ data are then incorporated into the modern geostatistical framework of Bayesian Maximum Entropy (BME). Through cross validation it is shown that incorporating error-corrected CMAQ data leads to more accurate estimates than just using observed data by themselves.

  12. On vertical advection truncation errors in terrain-following numerical models: Comparison to a laboratory model for upwelling over submarine canyons

    NASA Astrophysics Data System (ADS)

    Allen, S. E.; Dinniman, M. S.; Klinck, J. M.; Gorby, D. D.; Hewett, A. J.; Hickey, B. M.

    2003-01-01

    Submarine canyons which indent the continental shelf are frequently regions of steep (up to 45°), three-dimensional topography. Recent observations have delineated the flow over several submarine canyons during 2-4 day long upwelling episodes. Thus upwelling episodes over submarine canyons provide an excellent flow regime for evaluating numerical and physical models. Here we compare a physical and numerical model simulation of an upwelling event over a simplified submarine canyon. The numerical model being evaluated is a version of the S-Coordinate Rutgers University Model (SCRUM). Careful matching between the models is necessary for a stringent comparison. Results show a poor comparison for the homogeneous case due to nonhydrostatic effects in the laboratory model. Results for the stratified case are better but show a systematic difference between the numerical results and laboratory results. This difference is shown not to be due to nonhydrostatic effects. Rather, the difference is due to truncation errors in the calculation of the vertical advection of density in the numerical model. The calculation is inaccurate due to the terrain-following coordinates combined with a strong vertical gradient in density, vertical shear in the horizontal velocity and topography with strong curvature.

  13. Thermal error analysis and compensation for digital image/volume correlation

    NASA Astrophysics Data System (ADS)

    Pan, Bing

    2018-02-01

    Digital image/volume correlation (DIC/DVC) rely on the digital images acquired by digital cameras and x-ray CT scanners to extract the motion and deformation of test samples. Regrettably, these imaging devices are unstable optical systems, whose imaging geometry may undergo unavoidable slight and continual changes due to self-heating effect or ambient temperature variations. Changes in imaging geometry lead to both shift and expansion in the recorded 2D or 3D images, and finally manifest as systematic displacement and strain errors in DIC/DVC measurements. Since measurement accuracy is always the most important requirement in various experimental mechanics applications, these thermal-induced errors (referred to as thermal errors) should be given serious consideration in order to achieve high accuracy, reproducible DIC/DVC measurements. In this work, theoretical analyses are first given to understand the origin of thermal errors. Then real experiments are conducted to quantify thermal errors. Three solutions are suggested to mitigate or correct thermal errors. Among these solutions, a reference sample compensation approach is highly recommended because of its easy implementation, high accuracy and in-situ error correction capability. Most of the work has appeared in our previously published papers, thus its originality is not claimed. Instead, this paper aims to give a comprehensive overview and more insights of our work on thermal error analysis and compensation for DIC/DVC measurements.

  14. SU-D-BRD-07: Evaluation of the Effectiveness of Statistical Process Control Methods to Detect Systematic Errors For Routine Electron Energy Verification

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Parker, S

    2015-06-15

    Purpose: To evaluate the ability of statistical process control methods to detect systematic errors when using a two dimensional (2D) detector array for routine electron beam energy verification. Methods: Electron beam energy constancy was measured using an aluminum wedge and a 2D diode array on four linear accelerators. Process control limits were established. Measurements were recorded in control charts and compared with both calculated process control limits and TG-142 recommended specification limits. The data was tested for normality, process capability and process acceptability. Additional measurements were recorded while systematic errors were intentionally introduced. Systematic errors included shifts in the alignmentmore » of the wedge, incorrect orientation of the wedge, and incorrect array calibration. Results: Control limits calculated for each beam were smaller than the recommended specification limits. Process capability and process acceptability ratios were greater than one in all cases. All data was normally distributed. Shifts in the alignment of the wedge were most apparent for low energies. The smallest shift (0.5 mm) was detectable using process control limits in some cases, while the largest shift (2 mm) was detectable using specification limits in only one case. The wedge orientation tested did not affect the measurements as this did not affect the thickness of aluminum over the detectors of interest. Array calibration dependence varied with energy and selected array calibration. 6 MeV was the least sensitive to array calibration selection while 16 MeV was the most sensitive. Conclusion: Statistical process control methods demonstrated that the data distribution was normally distributed, the process was capable of meeting specifications, and that the process was centered within the specification limits. Though not all systematic errors were distinguishable from random errors, process control limits increased the ability to detect systematic errors using routine measurement of electron beam energy constancy.« less

  15. Thirty Years of Improving the NCEP Global Forecast System

    NASA Astrophysics Data System (ADS)

    White, G. H.; Manikin, G.; Yang, F.

    2014-12-01

    Current eight day forecasts by the NCEP Global Forecast System are as accurate as five day forecasts 30 years ago. This revolution in weather forecasting reflects increases in computer power, improvements in the assimilation of observations, especially satellite data, improvements in model physics, improvements in observations and international cooperation and competition. One important component has been and is the diagnosis, evaluation and reduction of systematic errors. The effect of proposed improvements in the GFS on systematic errors is one component of the thorough testing of such improvements by the Global Climate and Weather Modeling Branch. Examples of reductions in systematic errors in zonal mean temperatures and winds and other fields will be presented. One challenge in evaluating systematic errors is uncertainty in what reality is. Model initial states can be regarded as the best overall depiction of the atmosphere, but can be misleading in areas of few observations or for fields not well observed such as humidity or precipitation over the oceans. Verification of model physics is particularly difficult. The Environmental Modeling Center emphasizes the evaluation of systematic biases against observations. Recently EMC has placed greater emphasis on synoptic evaluation and on precipitation, 2-meter temperatures and dew points and 10 meter winds. A weekly EMC map discussion reviews the performance of many models over the United States and has helped diagnose and alleviate significant systematic errors in the GFS, including a near surface summertime evening cold wet bias over the eastern US and a multi-week period when the GFS persistently developed bogus tropical storms off Central America. The GFS exhibits a wet bias for light rain and a dry bias for moderate to heavy rain over the continental United States. Significant changes to the GFS are scheduled to be implemented in the fall of 2014. These include higher resolution, improved physics and improvements to the assimilation. These changes significantly improve the tropospheric flow and reduce a tropical upper tropospheric warm bias. One important error remaining is the failure of the GFS to maintain deep convection over Indonesia and in the tropical west Pacific. This and other current systematic errors will be presented.

  16. Method and apparatus for measuring lung density by Compton backscattering

    DOEpatents

    Loo, B.W.; Goulding, F.S.

    1988-03-11

    The density of the lung of a patient suffering from pulmonary edema is monitored by irradiating the lung by a single collimated beam of monochromatic photons and measuring the energies of photons compton back-scattered from the lung by a single high-resolution, high-purity germanium detector. A compact system geometry and a unique data extraction scheme are utilized to minimize systematic errors due to the presence of the chestwall and multiple scattering. 11 figs., 1 tab.

  17. Nucleon scalar and tensor charges using lattice QCD simulations at the physical value of the pion mass

    NASA Astrophysics Data System (ADS)

    Alexandrou, C.; Constantinou, M.; Dimopoulos, P.; Frezzotti, R.; Hadjiyiannakou, K.; Jansen, K.; Kallidonis, C.; Kostrzewa, B.; Koutsou, G.; Mangin-Brinet, M.; Vaquero Avilès-Casco, A.; Wenger, U.

    2017-06-01

    We present results on the light, strange and charm nucleon scalar and tensor charges from lattice QCD, using simulations with Nf=2 flavors of twisted mass clover-improved fermions with a physical value of the pion mass. Both connected and disconnected contributions are included, enabling us to extract the isoscalar, strange and charm charges for the first time directly at the physical point. Furthermore, the renormalization is computed nonperturbatively for both isovector and isoscalar quantities. We investigate excited state effects by analyzing several sink-source time separations and by employing a set of methods to probe ground state dominance. Our final results for the scalar charges are gSu=5.20 (42 )(15 )(12 ), gSd=4.27 (26 )(15 )(12 ), gSs=0.33 (7 )(1 )(4 ), and gSc=0.062 (13 )(3 )(5 ) and for the tensor charges gTu=0.794 (16 )(2 )(13 ), gTd=-0.210 (10 )(2 )(13 ), gTs=0.00032 (24 )(0 ), and gTc=0.00062 (85 )(0 ) in the MS ¯ scheme at 2 GeV. The first error is statistical, the second is the systematic error due to the renormalization and the third the systematic arising from estimating the contamination due to the excited states, when our data are precise enough to probe the first excited state.

  18. A Low-Cost Environmental Monitoring System: How to Prevent Systematic Errors in the Design Phase through the Combined Use of Additive Manufacturing and Thermographic Techniques.

    PubMed

    Salamone, Francesco; Danza, Ludovico; Meroni, Italo; Pollastro, Maria Cristina

    2017-04-11

    nEMoS (nano Environmental Monitoring System) is a 3D-printed device built following the Do-It-Yourself (DIY) approach. It can be connected to the web and it can be used to assess indoor environmental quality (IEQ). It is built using some low-cost sensors connected to an Arduino microcontroller board. The device is assembled in a small-sized case and both thermohygrometric sensors used to measure the air temperature and relative humidity, and the globe thermometer used to measure the radiant temperature, can be subject to thermal effects due to overheating of some nearby components. A thermographic analysis was made to rule out this possibility. The paper shows how the pervasive technique of additive manufacturing can be combined with the more traditional thermographic techniques to redesign the case and to verify the accuracy of the optimized system in order to prevent instrumental systematic errors in terms of the difference between experimental and actual values of the above-mentioned environmental parameters.

  19. A Low-Cost Environmental Monitoring System: How to Prevent Systematic Errors in the Design Phase through the Combined Use of Additive Manufacturing and Thermographic Techniques

    PubMed Central

    Salamone, Francesco; Danza, Ludovico; Meroni, Italo; Pollastro, Maria Cristina

    2017-01-01

    nEMoS (nano Environmental Monitoring System) is a 3D-printed device built following the Do-It-Yourself (DIY) approach. It can be connected to the web and it can be used to assess indoor environmental quality (IEQ). It is built using some low-cost sensors connected to an Arduino microcontroller board. The device is assembled in a small-sized case and both thermohygrometric sensors used to measure the air temperature and relative humidity, and the globe thermometer used to measure the radiant temperature, can be subject to thermal effects due to overheating of some nearby components. A thermographic analysis was made to rule out this possibility. The paper shows how the pervasive technique of additive manufacturing can be combined with the more traditional thermographic techniques to redesign the case and to verify the accuracy of the optimized system in order to prevent instrumental systematic errors in terms of the difference between experimental and actual values of the above-mentioned environmental parameters. PMID:28398225

  20. Presearch Data Conditioning in the Kepler Science Operations Center Pipeline

    NASA Technical Reports Server (NTRS)

    Twicken, Joseph D.; Chandrasekaran, Hema; Jenkins, Jon M.; Gunter, Jay P.; Girouard, Forrest; Klaus, Todd C.

    2010-01-01

    We describe the Presearch Data Conditioning (PDC) software component and its context in the Kepler Science Operations Center (SOC) pipeline. The primary tasks of this component are to correct systematic and other errors, remove excess flux due to aperture crowding, and condition the raw flux light curves for over 160,000 long cadence (thirty minute) and 512 short cadence (one minute) targets across the focal plane array. Long cadence corrected flux light curves are subjected to a transiting planet search in a subsequent pipeline module. We discuss the science algorithms for long and short cadence PDC: identification and correction of unexplained (i.e., unrelated to known anomalies) discontinuities; systematic error correction; and excess flux removal. We discuss the propagation of uncertainties from raw to corrected flux. Finally, we present examples of raw and corrected flux time series for flight data to illustrate PDC performance. Corrected flux light curves produced by PDC are exported to the Multi-mission Archive at Space Telescope [Science Institute] (MAST) and will be made available to the general public in accordance with the NASA/Kepler data release policy.

  1. Within-Tunnel Variations in Pressure Data for Three Transonic Wind Tunnels

    NASA Technical Reports Server (NTRS)

    DeLoach, Richard

    2014-01-01

    This paper compares the results of pressure measurements made on the same test article with the same test matrix in three transonic wind tunnels. A comparison is presented of the unexplained variance associated with polar replicates acquired in each tunnel. The impact of a significance component of systematic (not random) unexplained variance is reviewed, and the results of analyses of variance are presented to assess the degree of significant systematic error in these representative wind tunnel tests. Total uncertainty estimates are reported for 140 samples of pressure data, quantifying the effects of within-polar random errors and between-polar systematic bias errors.

  2. The Origin of Systematic Errors in the GCM Simulation of ITCZ Precipitation

    NASA Technical Reports Server (NTRS)

    Chao, Winston C.; Suarez, M. J.; Bacmeister, J. T.; Chen, B.; Takacs, L. L.

    2006-01-01

    Previous GCM studies have found that the systematic errors in the GCM simulation of the seasonal mean ITCZ intensity and location could be substantially corrected by adding suitable amount of rain re-evaporation or cumulus momentum transport. However, the reason(s) for these systematic errors and solutions has remained a puzzle. In this work the knowledge gained from previous studies of the ITCZ in an aqua-planet model with zonally uniform SST is applied to solve this puzzle. The solution is supported by further aqua-planet and full model experiments using the latest version of the Goddard Earth Observing System GCM.

  3. Quantifying Errors in TRMM-Based Multi-Sensor QPE Products Over Land in Preparation for GPM

    NASA Technical Reports Server (NTRS)

    Peters-Lidard, Christa D.; Tian, Yudong

    2011-01-01

    Determining uncertainties in satellite-based multi-sensor quantitative precipitation estimates over land of fundamental importance to both data producers and hydro climatological applications. ,Evaluating TRMM-era products also lays the groundwork and sets the direction for algorithm and applications development for future missions including GPM. QPE uncertainties result mostly from the interplay of systematic errors and random errors. In this work, we will synthesize our recent results quantifying the error characteristics of satellite-based precipitation estimates. Both systematic errors and total uncertainties have been analyzed for six different TRMM-era precipitation products (3B42, 3B42RT, CMORPH, PERSIANN, NRL and GSMap). For systematic errors, we devised an error decomposition scheme to separate errors in precipitation estimates into three independent components, hit biases, missed precipitation and false precipitation. This decomposition scheme reveals hydroclimatologically-relevant error features and provides a better link to the error sources than conventional analysis, because in the latter these error components tend to cancel one another when aggregated or averaged in space or time. For the random errors, we calculated the measurement spread from the ensemble of these six quasi-independent products, and thus produced a global map of measurement uncertainties. The map yields a global view of the error characteristics and their regional and seasonal variations, reveals many undocumented error features over areas with no validation data available, and provides better guidance to global assimilation of satellite-based precipitation data. Insights gained from these results and how they could help with GPM will be highlighted.

  4. THE SYSTEMATICS OF STRONG LENS MODELING QUANTIFIED: THE EFFECTS OF CONSTRAINT SELECTION AND REDSHIFT INFORMATION ON MAGNIFICATION, MASS, AND MULTIPLE IMAGE PREDICTABILITY

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Johnson, Traci L.; Sharon, Keren, E-mail: tljohn@umich.edu

    Until now, systematic errors in strong gravitational lens modeling have been acknowledged but have never been fully quantified. Here, we launch an investigation into the systematics induced by constraint selection. We model the simulated cluster Ares 362 times using random selections of image systems with and without spectroscopic redshifts and quantify the systematics using several diagnostics: image predictability, accuracy of model-predicted redshifts, enclosed mass, and magnification. We find that for models with >15 image systems, the image plane rms does not decrease significantly when more systems are added; however, the rms values quoted in the literature may be misleading asmore » to the ability of a model to predict new multiple images. The mass is well constrained near the Einstein radius in all cases, and systematic error drops to <2% for models using >10 image systems. Magnification errors are smallest along the straight portions of the critical curve, and the value of the magnification is systematically lower near curved portions. For >15 systems, the systematic error on magnification is ∼2%. We report no trend in magnification error with the fraction of spectroscopic image systems when selecting constraints at random; however, when using the same selection of constraints, increasing this fraction up to ∼0.5 will increase model accuracy. The results suggest that the selection of constraints, rather than quantity alone, determines the accuracy of the magnification. We note that spectroscopic follow-up of at least a few image systems is crucial because models without any spectroscopic redshifts are inaccurate across all of our diagnostics.« less

  5. A report from the AVS Standards Committee - Comparison of ion gauge calibrations by several standards laboratories

    NASA Technical Reports Server (NTRS)

    Warshawsky, I.

    1982-01-01

    Calibrations by four U.S. laboratories of four hot-cathode ion gauges, in the range 0.07-13 mPa, showed systematic differences among laboratories that were much larger than the expected error of any one calibration. They also suggested that any of the four gauges tested, if properly packaged and shipped, was able to serve as a transfer standard with probable error of 2%. A second comparison was made of the calibrations by two U.S. laboratories of some other gauges that had also been calibrated by the National Physical Laboratory, England. Results did not permit conclusive determination of whether differences were due to the laboratories or to changes in the gauges.

  6. IMPROVED SPECTROPHOTOMETRIC CALIBRATION OF THE SDSS-III BOSS QUASAR SAMPLE

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Margala, Daniel; Kirkby, David; Dawson, Kyle

    2016-11-10

    We present a model for spectrophotometric calibration errors in observations of quasars from the third generation of the Sloan Digital Sky Survey Baryon Oscillation Spectroscopic Survey (BOSS) and describe the correction procedure we have developed and applied to this sample. Calibration errors are primarily due to atmospheric differential refraction and guiding offsets during each exposure. The corrections potentially reduce the systematics for any studies of BOSS quasars, including the measurement of baryon acoustic oscillations using the Ly α forest. Our model suggests that, on average, the observed quasar flux in BOSS is overestimated by ∼19% at 3600 Å and underestimatedmore » by ∼24% at 10,000 Å. Our corrections for the entire BOSS quasar sample are publicly available.« less

  7. A correction method for systematic error in (1)H-NMR time-course data validated through stochastic cell culture simulation.

    PubMed

    Sokolenko, Stanislav; Aucoin, Marc G

    2015-09-04

    The growing ubiquity of metabolomic techniques has facilitated high frequency time-course data collection for an increasing number of applications. While the concentration trends of individual metabolites can be modeled with common curve fitting techniques, a more accurate representation of the data needs to consider effects that act on more than one metabolite in a given sample. To this end, we present a simple algorithm that uses nonparametric smoothing carried out on all observed metabolites at once to identify and correct systematic error from dilution effects. In addition, we develop a simulation of metabolite concentration time-course trends to supplement available data and explore algorithm performance. Although we focus on nuclear magnetic resonance (NMR) analysis in the context of cell culture, a number of possible extensions are discussed. Realistic metabolic data was successfully simulated using a 4-step process. Starting with a set of metabolite concentration time-courses from a metabolomic experiment, each time-course was classified as either increasing, decreasing, concave, or approximately constant. Trend shapes were simulated from generic functions corresponding to each classification. The resulting shapes were then scaled to simulated compound concentrations. Finally, the scaled trends were perturbed using a combination of random and systematic errors. To detect systematic errors, a nonparametric fit was applied to each trend and percent deviations calculated at every timepoint. Systematic errors could be identified at time-points where the median percent deviation exceeded a threshold value, determined by the choice of smoothing model and the number of observed trends. Regardless of model, increasing the number of observations over a time-course resulted in more accurate error estimates, although the improvement was not particularly large between 10 and 20 samples per trend. The presented algorithm was able to identify systematic errors as small as 2.5 % under a wide range of conditions. Both the simulation framework and error correction method represent examples of time-course analysis that can be applied to further developments in (1)H-NMR methodology and the more general application of quantitative metabolomics.

  8. SU-E-J-87: Building Deformation Error Histogram and Quality Assurance of Deformable Image Registration.

    PubMed

    Park, S B; Kim, H; Yao, M; Ellis, R; Machtay, M; Sohn, J W

    2012-06-01

    To quantify the systematic error of a Deformable Image Registration (DIR) system and establish Quality Assurance (QA) procedure. To address the shortfall of landmark approach which it is only available at the significant visible feature points, we adapted a Deformation Vector Map (DVM) comparison approach. We used two CT image sets (R and T image sets) taken for the same patient at different time and generated a DVM, which includes the DIR systematic error. The DVM was calculated using fine-tuned B-Spline DIR and L-BFGS optimizer. By utilizing this DVM we generated R' image set to eliminate the systematic error in DVM,. Thus, we have truth data set, R' and T image sets, and the truth DVM. To test a DIR system, we use R' and T image sets to a DIR system. We compare the test DVM to the truth DVM. If there is no systematic error, they should be identical. We built Deformation Error Histogram (DEH) for quantitative analysis. The test registration was performed with an in-house B-Spline DIR system using a stochastic gradient descent optimizer. Our example data set was generated with a head and neck patient case. We also tested CT to CBCT deformable registration. We found skin regions which interface with the air has relatively larger errors. Also mobile joints such as shoulders had larger errors. Average error for ROIs were as follows; CTV: 0.4mm, Brain stem: 1.4mm, Shoulders: 1.6mm, and Normal tissues: 0.7mm. We succeeded to build DEH approach to quantify the DVM uncertainty. Our data sets are available for testing other systems in our web page. Utilizing DEH, users can decide how much systematic error they would accept. DEH and our data can be a tool for an AAPM task group to compose a DIR system QA guideline. This project is partially supported by the Agency for Healthcare Research and Quality (AHRQ) grant 1R18HS017424-01A2. © 2012 American Association of Physicists in Medicine.

  9. The Effect of Systematic Error in Forced Oscillation Testing

    NASA Technical Reports Server (NTRS)

    Williams, Brianne Y.; Landman, Drew; Flory, Isaac L., IV; Murphy, Patrick C.

    2012-01-01

    One of the fundamental problems in flight dynamics is the formulation of aerodynamic forces and moments acting on an aircraft in arbitrary motion. Classically, conventional stability derivatives are used for the representation of aerodynamic loads in the aircraft equations of motion. However, for modern aircraft with highly nonlinear and unsteady aerodynamic characteristics undergoing maneuvers at high angle of attack and/or angular rates the conventional stability derivative model is no longer valid. Attempts to formulate aerodynamic model equations with unsteady terms are based on several different wind tunnel techniques: for example, captive, wind tunnel single degree-of-freedom, and wind tunnel free-flying techniques. One of the most common techniques is forced oscillation testing. However, the forced oscillation testing method does not address the systematic and systematic correlation errors from the test apparatus that cause inconsistencies in the measured oscillatory stability derivatives. The primary objective of this study is to identify the possible sources and magnitude of systematic error in representative dynamic test apparatuses. Sensitivities of the longitudinal stability derivatives to systematic errors are computed, using a high fidelity simulation of a forced oscillation test rig, and assessed using both Design of Experiments and Monte Carlo methods.

  10. Archie's law - a reappraisal

    NASA Astrophysics Data System (ADS)

    Glover, Paul W. J.

    2016-07-01

    When scientists apply Archie's first law they often include an extra parameter a, which was introduced about 10 years after the equation's first publication by Winsauer et al. (1952), and which is sometimes called the "tortuosity" or "lithology" parameter. This parameter is not, however, theoretically justified. Paradoxically, the Winsauer et al. (1952) form of Archie's law often performs better than the original, more theoretically correct version. The difference in the cementation exponent calculated from these two forms of Archie's law is important, and can lead to a misestimation of reserves by at least 20 % for typical reservoir parameter values. We have examined the apparent paradox, and conclude that while the theoretical form of the law is correct, the data that we have been analysing with Archie's law have been in error. There are at least three types of systematic error that are present in most measurements: (i) a porosity error, (ii) a pore fluid salinity error, and (iii) a temperature error. Each of these systematic errors is sufficient to ensure that a non-unity value of the parameter a is required in order to fit the electrical data well. Fortunately, the inclusion of this parameter in the fit has compensated for the presence of the systematic errors in the electrical and porosity data, leading to a value of cementation exponent that is correct. The exceptions are those cementation exponents that have been calculated for individual core plugs. We make a number of recommendations for reducing the systematic errors that contribute to the problem and suggest that the value of the parameter a may now be used as an indication of data quality.

  11. Dark Energy Survey Year 1 results: cross-correlation redshifts - methods and systematics characterization

    NASA Astrophysics Data System (ADS)

    Gatti, M.; Vielzeuf, P.; Davis, C.; Cawthon, R.; Rau, M. M.; DeRose, J.; De Vicente, J.; Alarcon, A.; Rozo, E.; Gaztanaga, E.; Hoyle, B.; Miquel, R.; Bernstein, G. M.; Bonnett, C.; Carnero Rosell, A.; Castander, F. J.; Chang, C.; da Costa, L. N.; Gruen, D.; Gschwend, J.; Hartley, W. G.; Lin, H.; MacCrann, N.; Maia, M. A. G.; Ogando, R. L. C.; Roodman, A.; Sevilla-Noarbe, I.; Troxel, M. A.; Wechsler, R. H.; Asorey, J.; Davis, T. M.; Glazebrook, K.; Hinton, S. R.; Lewis, G.; Lidman, C.; Macaulay, E.; Möller, A.; O'Neill, C. R.; Sommer, N. E.; Uddin, S. A.; Yuan, F.; Zhang, B.; Abbott, T. M. C.; Allam, S.; Annis, J.; Bechtol, K.; Brooks, D.; Burke, D. L.; Carollo, D.; Carrasco Kind, M.; Carretero, J.; Cunha, C. E.; D'Andrea, C. B.; DePoy, D. L.; Desai, S.; Eifler, T. F.; Evrard, A. E.; Flaugher, B.; Fosalba, P.; Frieman, J.; García-Bellido, J.; Gerdes, D. W.; Goldstein, D. A.; Gruendl, R. A.; Gutierrez, G.; Honscheid, K.; Hoormann, J. K.; Jain, B.; James, D. J.; Jarvis, M.; Jeltema, T.; Johnson, M. W. G.; Johnson, M. D.; Krause, E.; Kuehn, K.; Kuhlmann, S.; Kuropatkin, N.; Li, T. S.; Lima, M.; Marshall, J. L.; Melchior, P.; Menanteau, F.; Nichol, R. C.; Nord, B.; Plazas, A. A.; Reil, K.; Rykoff, E. S.; Sako, M.; Sanchez, E.; Scarpine, V.; Schubnell, M.; Sheldon, E.; Smith, M.; Smith, R. C.; Soares-Santos, M.; Sobreira, F.; Suchyta, E.; Swanson, M. E. C.; Tarle, G.; Thomas, D.; Tucker, B. E.; Tucker, D. L.; Vikram, V.; Walker, A. R.; Weller, J.; Wester, W.; Wolf, R. C.

    2018-06-01

    We use numerical simulations to characterize the performance of a clustering-based method to calibrate photometric redshift biases. In particular, we cross-correlate the weak lensing source galaxies from the Dark Energy Survey Year 1 sample with redMaGiC galaxies (luminous red galaxies with secure photometric redshifts) to estimate the redshift distribution of the former sample. The recovered redshift distributions are used to calibrate the photometric redshift bias of standard photo-z methods applied to the same source galaxy sample. We apply the method to two photo-z codes run in our simulated data: Bayesian Photometric Redshift and Directional Neighbourhood Fitting. We characterize the systematic uncertainties of our calibration procedure, and find that these systematic uncertainties dominate our error budget. The dominant systematics are due to our assumption of unevolving bias and clustering across each redshift bin, and to differences between the shapes of the redshift distributions derived by clustering versus photo-zs. The systematic uncertainty in the mean redshift bias of the source galaxy sample is Δz ≲ 0.02, though the precise value depends on the redshift bin under consideration. We discuss possible ways to mitigate the impact of our dominant systematics in future analyses.

  12. Modeling systematic errors: polychromatic sources of Beer-Lambert deviations in HPLC/UV and nonchromatographic spectrophotometric assays.

    PubMed

    Galli, C

    2001-07-01

    It is well established that the use of polychromatic radiation in spectrophotometric assays leads to excursions from the Beer-Lambert limit. This Note models the resulting systematic error as a function of assay spectral width, slope of molecular extinction coefficient, and analyte concentration. The theoretical calculations are compared with recent experimental results; a parameter is introduced which can be used to estimate the magnitude of the systematic error in both chromatographic and nonchromatographic spectrophotometric assays. It is important to realize that the polychromatic radiation employed in common laboratory equipment can yield assay errors up to approximately 4%, even at absorption levels generally considered 'safe' (i.e. absorption <1). Thus careful consideration of instrumental spectral width, analyte concentration, and slope of molecular extinction coefficient is required to ensure robust analytical methods.

  13. A service evaluation of on-line image-guided radiotherapy to lower extremity sarcoma: Investigating the workload implications of a 3 mm action level for image assessment and correction prior to delivery.

    PubMed

    Taylor, C; Parker, J; Stratford, J; Warren, M

    2018-05-01

    Although all systematic and random positional setup errors can be corrected for in entirety during on-line image-guided radiotherapy, the use of a specified action level, below which no correction occurs, is also an option. The following service evaluation aimed to investigate the use of this 3 mm action level for on-line image assessment and correction (online, systematic set-up error and weekly evaluation) for lower extremity sarcoma, and understand the impact on imaging frequency and patient positioning error within one cancer centre. All patients were immobilised using a thermoplastic shell attached to a plastic base and an individual moulded footrest. A retrospective analysis of 30 patients was performed. Patient setup and correctional data derived from cone beam CT analysis was retrieved. The timing, frequency and magnitude of corrections were evaluated. The population systematic and random error was derived. 20% of patients had no systematic corrections over the duration of treatment, and 47% had one. The maximum number of systematic corrections per course of radiotherapy was 4, which occurred for 2 patients. 34% of episodes occurred within the first 5 fractions. All patients had at least one observed translational error during their treatment greater than 0.3 cm, and 80% of patients had at least one observed translational error during their treatment greater than 0.5 cm. The population systematic error was 0.14 cm, 0.10 cm, 0.14 cm and random error was 0.27 cm, 0.22 cm, 0.23 cm in the lateral, caudocranial and anteroposterial directions. The required Planning Target Volume margin for the study population was 0.55 cm, 0.41 cm and 0.50 cm in the lateral, caudocranial and anteroposterial directions. The 3 mm action level for image assessment and correction prior to delivery reduced the imaging burden and focussed intervention on patients that exhibited greater positional variability. This strategy could be an efficient deployment of departmental resources if full daily correction of positional setup error is not possible. Copyright © 2017. Published by Elsevier Ltd.

  14. Helical tomotherapy setup variations in canine nasal tumor patients immobilized with a bite block.

    PubMed

    Kubicek, Lyndsay N; Seo, Songwon; Chappell, Richard J; Jeraj, Robert; Forrest, Lisa J

    2012-01-01

    The purpose of our study was to compare setup variation in four degrees of freedom (vertical, longitudinal, lateral, and roll) between canine nasal tumor patients immobilized with a mattress and bite block, versus a mattress alone. Our secondary aim was to define a clinical target volume (CTV) to planning target volume (PTV) expansion margin based on our mean systematic error values associated with nasal tumor patients immobilized by a mattress and bite block. We evaluated six parameters for setup corrections: systematic error, random error, patient-patient variation in systematic errors, the magnitude of patient-specific random errors (root mean square [RMS]), distance error, and the variation of setup corrections from zero shift. The variations in all parameters were statistically smaller in the group immobilized by a mattress and bite block. The mean setup corrections in the mattress and bite block group ranged from 0.91 mm to 1.59 mm for the translational errors and 0.5°. Although most veterinary radiation facilities do not have access to Image-guided radiotherapy (IGRT), we identified a need for more rigid fixation, established the value of adding IGRT to veterinary radiation therapy, and define the CTV-PTV setup error margin for canine nasal tumor patients immobilized in a mattress and bite block. © 2012 Veterinary Radiology & Ultrasound.

  15. Robust radio interferometric calibration using the t-distribution

    NASA Astrophysics Data System (ADS)

    Kazemi, S.; Yatawatta, S.

    2013-10-01

    A major stage of radio interferometric data processing is calibration or the estimation of systematic errors in the data and the correction for such errors. A stochastic error (noise) model is assumed, and in most cases, this underlying model is assumed to be Gaussian. However, outliers in the data due to interference or due to errors in the sky model would have adverse effects on processing based on a Gaussian noise model. Most of the shortcomings of calibration such as the loss in flux or coherence, and the appearance of spurious sources, could be attributed to the deviations of the underlying noise model. In this paper, we propose to improve the robustness of calibration by using a noise model based on Student's t-distribution. Student's t-noise is a special case of Gaussian noise when the variance is unknown. Unlike Gaussian-noise-model-based calibration, traditional least-squares minimization would not directly extend to a case when we have a Student's t-noise model. Therefore, we use a variant of the expectation-maximization algorithm, called the expectation-conditional maximization either algorithm, when we have a Student's t-noise model and use the Levenberg-Marquardt algorithm in the maximization step. We give simulation results to show the robustness of the proposed calibration method as opposed to traditional Gaussian-noise-model-based calibration, especially in preserving the flux of weaker sources that are not included in the calibration model.

  16. Asteroid approach covariance analysis for the Clementine mission

    NASA Technical Reports Server (NTRS)

    Ionasescu, Rodica; Sonnabend, David

    1993-01-01

    The Clementine mission is designed to test Strategic Defense Initiative Organization (SDIO) technology, the Brilliant Pebbles and Brilliant Eyes sensors, by mapping the moon surface and flying by the asteroid Geographos. The capability of two of the instruments available on board the spacecraft, the lidar (laser radar) and the UV/Visible camera is used in the covariance analysis to obtain the spacecraft delivery uncertainties at the asteroid. These uncertainties are due primarily to asteroid ephemeris uncertainties. On board optical navigation reduces the uncertainty in the knowledge of the spacecraft position in the direction perpendicular to the incoming asymptote to a one-sigma value of under 1 km, at the closest approach distance of 100 km. The uncertainty in the knowledge of the encounter time is about 0.1 seconds for a flyby velocity of 10.85 km/s. The magnitude of these uncertainties is due largely to Center Finding Errors (CFE). These systematic errors represent the accuracy expected in locating the center of the asteroid in the optical navigation images, in the absence of a topographic model for the asteroid. The direction of the incoming asymptote cannot be estimated accurately until minutes before the asteroid flyby, and correcting for it would require autonomous navigation. Orbit determination errors dominate over maneuver execution errors, and the final delivery accuracy attained is basically the orbit determination uncertainty before the final maneuver.

  17. Advancing the research agenda for diagnostic error reduction.

    PubMed

    Zwaan, Laura; Schiff, Gordon D; Singh, Hardeep

    2013-10-01

    Diagnostic errors remain an underemphasised and understudied area of patient safety research. We briefly summarise the methods that have been used to conduct research on epidemiology, contributing factors and interventions related to diagnostic error and outline directions for future research. Research methods that have studied epidemiology of diagnostic error provide some estimate on diagnostic error rates. However, there appears to be a large variability in the reported rates due to the heterogeneity of definitions and study methods used. Thus, future methods should focus on obtaining more precise estimates in different settings of care. This would lay the foundation for measuring error rates over time to evaluate improvements. Research methods have studied contributing factors for diagnostic error in both naturalistic and experimental settings. Both approaches have revealed important and complementary information. Newer conceptual models from outside healthcare are needed to advance the depth and rigour of analysis of systems and cognitive insights of causes of error. While the literature has suggested many potentially fruitful interventions for reducing diagnostic errors, most have not been systematically evaluated and/or widely implemented in practice. Research is needed to study promising intervention areas such as enhanced patient involvement in diagnosis, improving diagnosis through the use of electronic tools and identification and reduction of specific diagnostic process 'pitfalls' (eg, failure to conduct appropriate diagnostic evaluation of a breast lump after a 'normal' mammogram). The last decade of research on diagnostic error has made promising steps and laid a foundation for more rigorous methods to advance the field.

  18. Dynamically correcting two-qubit gates against any systematic logical error

    NASA Astrophysics Data System (ADS)

    Calderon Vargas, Fernando Antonio

    The reliability of quantum information processing depends on the ability to deal with noise and error in an efficient way. A significant source of error in many settings is coherent, systematic gate error. This work introduces a set of composite pulse sequences that generate maximally entangling gates and correct all systematic errors within the logical subspace to arbitrary order. These sequences are applica- ble for any two-qubit interaction Hamiltonian, and make no assumptions about the underlying noise mechanism except that it is constant on the timescale of the opera- tion. The prime use for our results will be in cases where one has limited knowledge of the underlying physical noise and control mechanisms, highly constrained control, or both. In particular, we apply these composite pulse sequences to the quantum system formed by two capacitively coupled singlet-triplet qubits, which is charac- terized by having constrained control and noise sources that are low frequency and of a non-Markovian nature.

  19. SPIDER. V. MEASURING SYSTEMATIC EFFECTS IN EARLY-TYPE GALAXY STELLAR MASSES FROM PHOTOMETRIC SPECTRAL ENERGY DISTRIBUTION FITTING

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Swindle, R.; Gal, R. R.; La Barbera, F.

    2011-10-15

    We present robust statistical estimates of the accuracy of early-type galaxy stellar masses derived from spectral energy distribution (SED) fitting as functions of various empirical and theoretical assumptions. Using large samples consisting of {approx}40,000 galaxies from the Sloan Digital Sky Survey (SDSS; ugriz), of which {approx}5000 are also in the UKIRT Infrared Deep Sky Survey (YJHK), with spectroscopic redshifts in the range 0.05 {<=} z {<=} 0.095, we test the reliability of some commonly used stellar population models and extinction laws for computing stellar masses. Spectroscopic ages (t), metallicities (Z), and extinctions (A{sub V} ) are also computed from fitsmore » to SDSS spectra using various population models. These external constraints are used in additional tests to estimate the systematic errors in the stellar masses derived from SED fitting, where t, Z, and A{sub V} are typically left as free parameters. We find reasonable agreement in mass estimates among stellar population models, with variation of the initial mass function and extinction law yielding systematic biases on the mass of nearly a factor of two, in agreement with other studies. Removing the near-infrared bands changes the statistical bias in mass by only {approx}0.06 dex, adding uncertainties of {approx}0.1 dex at the 95% CL. In contrast, we find that removing an ultraviolet band is more critical, introducing 2{sigma} uncertainties of {approx}0.15 dex. Finally, we find that the stellar masses are less affected by the absence of metallicity and/or dust extinction knowledge. However, there is a definite systematic offset in the mass estimate when the stellar population age is unknown, up to a factor of 2.5 for very old (12 Gyr) stellar populations. We present the stellar masses for our sample, corrected for the measured systematic biases due to photometrically determined ages, finding that age errors produce lower stellar masses by {approx}0.15 dex, with errors of {approx}0.02 dex at the 95% CL for the median stellar age subsample.« less

  20. The application of SHERPA (Systematic Human Error Reduction and Prediction Approach) in the development of compensatory cognitive rehabilitation strategies for stroke patients with left and right brain damage.

    PubMed

    Hughes, Charmayne M L; Baber, Chris; Bienkiewicz, Marta; Worthington, Andrew; Hazell, Alexa; Hermsdörfer, Joachim

    2015-01-01

    Approximately 33% of stroke patients have difficulty performing activities of daily living, often committing errors during the planning and execution of such activities. The objective of this study was to evaluate the ability of the human error identification (HEI) technique SHERPA (Systematic Human Error Reduction and Prediction Approach) to predict errors during the performance of daily activities in stroke patients with left and right hemisphere lesions. Using SHERPA we successfully predicted 36 of the 38 observed errors, with analysis indicating that the proportion of predicted and observed errors was similar for all sub-tasks and severity levels. HEI results were used to develop compensatory cognitive strategies that clinicians could employ to reduce or prevent errors from occurring. This study provides evidence for the reliability and validity of SHERPA in the design of cognitive rehabilitation strategies in stroke populations.

  1. Internal robustness: systematic search for systematic bias in SN Ia data

    NASA Astrophysics Data System (ADS)

    Amendola, Luca; Marra, Valerio; Quartin, Miguel

    2013-04-01

    A great deal of effort is currently being devoted to understanding, estimating and removing systematic errors in cosmological data. In the particular case of Type Ia supernovae, systematics are starting to dominate the error budget. Here we propose a Bayesian tool for carrying out a systematic search for systematic contamination. This serves as an extension to the standard goodness-of-fit tests and allows not only to cross-check raw or processed data for the presence of systematics but also to pin-point the data that are most likely contaminated. We successfully test our tool with mock catalogues and conclude that the Union2.1 data do not possess a significant amount of systematics. Finally, we show that if one includes in Union2.1 the supernovae that originally failed the quality cuts, our tool signals the presence of systematics at over 3.8σ confidence level.

  2. High-Accuracy Decoupling Estimation of the Systematic Coordinate Errors of an INS and Intensified High Dynamic Star Tracker Based on the Constrained Least Squares Method

    PubMed Central

    Jiang, Jie; Yu, Wenbo; Zhang, Guangjun

    2017-01-01

    Navigation accuracy is one of the key performance indicators of an inertial navigation system (INS). Requirements for an accuracy assessment of an INS in a real work environment are exceedingly urgent because of enormous differences between real work and laboratory test environments. An attitude accuracy assessment of an INS based on the intensified high dynamic star tracker (IHDST) is particularly suitable for a real complex dynamic environment. However, the coupled systematic coordinate errors of an INS and the IHDST severely decrease the attitude assessment accuracy of an INS. Given that, a high-accuracy decoupling estimation method of the above systematic coordinate errors based on the constrained least squares (CLS) method is proposed in this paper. The reference frame of the IHDST is firstly converted to be consistent with that of the INS because their reference frames are completely different. Thereafter, the decoupling estimation model of the systematic coordinate errors is established and the CLS-based optimization method is utilized to estimate errors accurately. After compensating for error, the attitude accuracy of an INS can be assessed based on IHDST accurately. Both simulated experiments and real flight experiments of aircraft are conducted, and the experimental results demonstrate that the proposed method is effective and shows excellent performance for the attitude accuracy assessment of an INS in a real work environment. PMID:28991179

  3. Seeing Your Error Alters My Pointing: Observing Systematic Pointing Errors Induces Sensori-Motor After-Effects

    PubMed Central

    Ronchi, Roberta; Revol, Patrice; Katayama, Masahiro; Rossetti, Yves; Farnè, Alessandro

    2011-01-01

    During the procedure of prism adaptation, subjects execute pointing movements to visual targets under a lateral optical displacement: As consequence of the discrepancy between visual and proprioceptive inputs, their visuo-motor activity is characterized by pointing errors. The perception of such final errors triggers error-correction processes that eventually result into sensori-motor compensation, opposite to the prismatic displacement (i.e., after-effects). Here we tested whether the mere observation of erroneous pointing movements, similar to those executed during prism adaptation, is sufficient to produce adaptation-like after-effects. Neurotypical participants observed, from a first-person perspective, the examiner's arm making incorrect pointing movements that systematically overshot visual targets location to the right, thus simulating a rightward optical deviation. Three classical after-effect measures (proprioceptive, visual and visual-proprioceptive shift) were recorded before and after first-person's perspective observation of pointing errors. Results showed that mere visual exposure to an arm that systematically points on the right-side of a target (i.e., without error correction) produces a leftward after-effect, which mostly affects the observer's proprioceptive estimation of her body midline. In addition, being exposed to such a constant visual error induced in the observer the illusion “to feel” the seen movement. These findings indicate that it is possible to elicit sensori-motor after-effects by mere observation of movement errors. PMID:21731649

  4. Directional variance adjustment: bias reduction in covariance matrices based on factor analysis with an application to portfolio optimization.

    PubMed

    Bartz, Daniel; Hatrick, Kerr; Hesse, Christian W; Müller, Klaus-Robert; Lemm, Steven

    2013-01-01

    Robust and reliable covariance estimates play a decisive role in financial and many other applications. An important class of estimators is based on factor models. Here, we show by extensive Monte Carlo simulations that covariance matrices derived from the statistical Factor Analysis model exhibit a systematic error, which is similar to the well-known systematic error of the spectrum of the sample covariance matrix. Moreover, we introduce the Directional Variance Adjustment (DVA) algorithm, which diminishes the systematic error. In a thorough empirical study for the US, European, and Hong Kong stock market we show that our proposed method leads to improved portfolio allocation.

  5. Directional Variance Adjustment: Bias Reduction in Covariance Matrices Based on Factor Analysis with an Application to Portfolio Optimization

    PubMed Central

    Bartz, Daniel; Hatrick, Kerr; Hesse, Christian W.; Müller, Klaus-Robert; Lemm, Steven

    2013-01-01

    Robust and reliable covariance estimates play a decisive role in financial and many other applications. An important class of estimators is based on factor models. Here, we show by extensive Monte Carlo simulations that covariance matrices derived from the statistical Factor Analysis model exhibit a systematic error, which is similar to the well-known systematic error of the spectrum of the sample covariance matrix. Moreover, we introduce the Directional Variance Adjustment (DVA) algorithm, which diminishes the systematic error. In a thorough empirical study for the US, European, and Hong Kong stock market we show that our proposed method leads to improved portfolio allocation. PMID:23844016

  6. The accuracy of estimates of the overturning circulation from basin-wide mooring arrays

    NASA Astrophysics Data System (ADS)

    Sinha, B.; Smeed, D. A.; McCarthy, G.; Moat, B. I.; Josey, S. A.; Hirschi, J. J.-M.; Frajka-Williams, E.; Blaker, A. T.; Rayner, D.; Madec, G.

    2018-01-01

    Previous modeling and observational studies have established that it is possible to accurately monitor the Atlantic Meridional Overturning Circulation (AMOC) at 26.5°N using a coast-to-coast array of instrumented moorings supplemented by direct transport measurements in key boundary regions (the RAPID/MOCHA/WBTS Array). The main sources of observational and structural errors have been identified in a variety of individual studies. Here a unified framework for identifying and quantifying structural errors associated with the RAPID array-based AMOC estimates is established using a high-resolution (eddy resolving at low-mid latitudes, eddy permitting elsewhere) ocean general circulation model, which simulates the ocean state between 1978 and 2010. We define a virtual RAPID array in the model in close analogy to the real RAPID array and compare the AMOC estimate from the virtual array with the true model AMOC. The model analysis suggests that the RAPID method underestimates the mean AMOC by ∼1.5 Sv (1 Sv = 106 m3 s-1) at ∼900 m depth, however it captures the variability to high accuracy. We examine three major contributions to the streamfunction bias: (i) due to the assumption of a single fixed reference level for calculation of geostrophic transports, (ii) due to regions not sampled by the array and (iii) due to ageostrophic transport. A key element in (i) and (iii) is use of the model sea surface height to establish the true (or absolute) geostrophic transport. In the upper 2000 m, we find that the reference level bias is strongest and most variable in time, whereas the bias due to unsampled regions is largest below 3000 m. The ageostrophic transport is significant in the upper 1000 m but shows very little variability. The results establish, for the first time, the uncertainty of the AMOC estimate due to the combined structural errors in the measurement design and suggest ways in which the error could be reduced. Our work has applications to basin-wide circulation measurement arrays at other latitudes and in other basins as well as quantifying systematic errors in ocean model estimates of the AMOC at 26.5°N.

  7. Approximate calculation of multispar cantilever and semicantilever wings with parallel ribs under direct and indirect loading

    NASA Technical Reports Server (NTRS)

    Sanger, Eugen

    1932-01-01

    A method is presented for approximate static calculation, which is based on the customary assumption of rigid ribs, while taking into account the systematic errors in the calculation results due to this arbitrary assumption. The procedure is given in greater detail for semicantilever and cantilever wings with polygonal spar plan form and for wings under direct loading only. The last example illustrates the advantages of the use of influence lines for such wing structures and their practical interpretation.

  8. Stitching interferometry for ellipsoidal x-ray mirrors

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Yumoto, Hirokatsu, E-mail: yumoto@spring8.or.jp; Koyama, Takahisa; Matsuyama, Satoshi

    2016-05-15

    Ellipsoidal mirrors, which can efficiently produce a two-dimensional focusing beam with a single mirror, are superior x-ray focusing optics, especially when compared to elliptical-cylinder mirrors in the Kirkpatrick–Baez geometry. However, nano-focusing ellipsoidal mirrors are not commonly used for x-ray optics because achieving the accuracy required for the surface metrology of nano-focusing ellipsoidal mirrors is difficult due to their small radius of curvature along the short ellipsoidal axis. Here, we developed a surface metrology system for nano-focusing ellipsoidal mirrors using stitching interferometric techniques. The developed system simultaneously measures sub-aperture shapes with a microscopic interferometer and the tilt angles of the sub-aperturemore » shapes with a large Fizeau interferometer. After correcting the systematic errors included in the sub-aperture shapes, the entire mirror shape is calculated by stitching the sub-aperture shapes based on the obtained relative angles between partially overlapped sub-apertures. In this study, we developed correction methods for systematic errors in sub-aperture shapes that originated from off-axis aberrations produced in the optics of the microscopic interferometer. The systematic errors on an ellipsoidal mirror were estimated by measuring a series of tilted plane substrates and the ellipsoidal substrate. From measurements of an ellipsoidal mirror with a 3.6-mm radius of curvature at the mirror center, we obtained a measurement repeatability of 0.51 nm (root-mean-square) in an assessment area of 0.5 mm × 99.18 mm. This value satisfies the requirements for surface metrology of nano-focusing x-ray mirrors. Thus, the developed metrology system should be applicable for fabricating nano-focusing ellipsoidal mirrors.« less

  9. Simulations using patient data to evaluate systematic errors that may occur in 4D treatment planning: a proof of concept study.

    PubMed

    St James, Sara; Seco, Joao; Mishra, Pankaj; Lewis, John H

    2013-09-01

    The purpose of this work is to present a framework to evaluate the accuracy of four-dimensional treatment planning in external beam radiation therapy using measured patient data and digital phantoms. To accomplish this, 4D digital phantoms of two model patients were created using measured patient lung tumor positions. These phantoms were used to simulate a four-dimensional computed tomography image set, which in turn was used to create a 4D Monte Carlo (4DMC) treatment plan. The 4DMC plan was evaluated by simulating the delivery of the treatment plan over approximately 5 min of tumor motion measured from the same patient on a different day. Unique phantoms accounting for the patient position (tumor position and thorax position) at 2 s intervals were used to represent the model patients on the day of treatment delivery and the delivered dose to the tumor was determined using Monte Carlo simulations. For Patient 1, the tumor was adequately covered with 95.2% of the tumor receiving the prescribed dose. For Patient 2, the tumor was not adequately covered and only 74.3% of the tumor received the prescribed dose. This study presents a framework to evaluate 4D treatment planning methods and demonstrates a potential limitation of 4D treatment planning methods. When systematic errors are present, including when the imaging study used for treatment planning does not represent all potential tumor locations during therapy, the treatment planning methods may not adequately predict the dose to the tumor. This is the first example of a simulation study based on patient tumor trajectories where systematic errors that occur due to an inaccurate estimate of tumor motion are evaluated.

  10. Superresolving Black Hole Images with Full-Closure Sparse Modeling

    NASA Astrophysics Data System (ADS)

    Crowley, Chelsea; Akiyama, Kazunori; Fish, Vincent

    2018-01-01

    It is believed that almost all galaxies have black holes at their centers. Imaging a black hole is a primary objective to answer scientific questions relating to relativistic accretion and jet formation. The Event Horizon Telescope (EHT) is set to capture images of two nearby black holes, Sagittarius A* at the center of the Milky Way galaxy roughly 26,000 light years away and the other M87 which is in Virgo A, a large elliptical galaxy that is 50 million light years away. Sparse imaging techniques have shown great promise for reconstructing high-fidelity superresolved images of black holes from simulated data. Previous work has included the effects of atmospheric phase errors and thermal noise, but not systematic amplitude errors that arise due to miscalibration. We explore a full-closure imaging technique with sparse modeling that uses closure amplitudes and closure phases to improve the imaging process. This new technique can successfully handle data with systematic amplitude errors. Applying our technique to synthetic EHT data of M87, we find that full-closure sparse modeling can reconstruct images better than traditional methods and recover key structural information on the source, such as the shape and size of the predicted photon ring. These results suggest that our new approach will provide superior imaging performance for data from the EHT and other interferometric arrays.

  11. Improved Analysis of GW150914 Using a Fully Spin-Precessing Waveform Model

    NASA Astrophysics Data System (ADS)

    Abbott, B. P.; Abbott, R.; Abbott, T. D.; Abernathy, M. R.; Acernese, F.; Ackley, K.; Adams, C.; Adams, T.; Addesso, P.; Adhikari, R. X.; Adya, V. B.; Affeldt, C.; Agathos, M.; Agatsuma, K.; Aggarwal, N.; Aguiar, O. D.; Aiello, L.; Ain, A.; Ajith, P.; Allen, B.; Allocca, A.; Altin, P. A.; Anderson, S. B.; Anderson, W. G.; Arai, K.; Araya, M. C.; Arceneaux, C. C.; Areeda, J. S.; Arnaud, N.; Arun, K. G.; Ascenzi, S.; Ashton, G.; Ast, M.; Aston, S. M.; Astone, P.; Aufmuth, P.; Aulbert, C.; Babak, S.; Bacon, P.; Bader, M. K. M.; Baker, P. T.; Baldaccini, F.; Ballardin, G.; Ballmer, S. W.; Barayoga, J. C.; Barclay, S. E.; Barish, B. C.; Barker, D.; Barone, F.; Barr, B.; Barsotti, L.; Barsuglia, M.; Barta, D.; Bartlett, J.; Bartos, I.; Bassiri, R.; Basti, A.; Batch, J. C.; Baune, C.; Bavigadda, V.; Bazzan, M.; Bejger, M.; Bell, A. S.; Berger, B. K.; Bergmann, G.; Berry, C. P. L.; Bersanetti, D.; Bertolini, A.; Betzwieser, J.; Bhagwat, S.; Bhandare, R.; Bilenko, I. A.; Billingsley, G.; Birch, J.; Birney, R.; Birnholtz, O.; Biscans, S.; Bisht, A.; Bitossi, M.; Biwer, C.; Bizouard, M. A.; Blackburn, J. K.; Blair, C. D.; Blair, D. G.; Blair, R. M.; Bloemen, S.; Bock, O.; Boer, M.; Bogaert, G.; Bogan, C.; Bohe, A.; Bond, C.; Bondu, F.; Bonnand, R.; Boom, B. A.; Bork, R.; Boschi, V.; Bose, S.; Bouffanais, Y.; Bozzi, A.; Bradaschia, C.; Brady, P. R.; Braginsky, V. B.; Branchesi, M.; Brau, J. E.; Briant, T.; Brillet, A.; Brinkmann, M.; Brisson, V.; Brockill, P.; Broida, J. E.; Brooks, A. F.; Brown, D. A.; Brown, D. D.; Brown, N. M.; Brunett, S.; Buchanan, C. C.; Buikema, A.; Bulik, T.; Bulten, H. J.; Buonanno, A.; Buskulic, D.; Buy, C.; Byer, R. L.; Cabero, M.; Cadonati, L.; Cagnoli, G.; Cahillane, C.; Calderón Bustillo, J.; Callister, T.; Calloni, E.; Camp, J. B.; Cannon, K. C.; Cao, J.; Capano, C. D.; Capocasa, E.; Carbognani, F.; Caride, S.; Casanueva Diaz, C.; Casentini, J.; Caudill, S.; Cavaglià, M.; Cavalier, F.; Cavalieri, R.; Cella, G.; Cepeda, C. B.; Cerboni Baiardi, L.; Cerretani, G.; Cesarini, E.; Chamberlin, S. J.; Chan, M.; Chao, S.; Charlton, P.; Chassande-Mottin, E.; Cheeseboro, B. D.; Chen, H. Y.; Chen, Y.; Cheng, C.; Chincarini, A.; Chiummo, A.; Cho, H. S.; Cho, M.; Chow, J. H.; Christensen, N.; Chu, Q.; Chua, S.; Chung, S.; Ciani, G.; Clara, F.; Clark, J. A.; Cleva, F.; Coccia, E.; Cohadon, P.-F.; Colla, A.; Collette, C. G.; Cominsky, L.; Constancio, M.; Conte, A.; Conti, L.; Cook, D.; Corbitt, T. R.; Cornish, N.; Corsi, A.; Cortese, S.; Costa, C. A.; Coughlin, M. W.; Coughlin, S. B.; Coulon, J.-P.; Countryman, S. T.; Couvares, P.; Cowan, E. E.; Coward, D. M.; Cowart, M. J.; Coyne, D. C.; Coyne, R.; Craig, K.; Creighton, J. D. E.; Cripe, J.; Crowder, S. G.; Cumming, A.; Cunningham, L.; Cuoco, E.; Dal Canton, T.; Danilishin, S. L.; D'Antonio, S.; Danzmann, K.; Darman, N. S.; Dasgupta, A.; Da Silva Costa, C. F.; Dattilo, V.; Dave, I.; Davier, M.; Davies, G. S.; Daw, E. J.; Day, R.; De, S.; DeBra, D.; Debreczeni, G.; Degallaix, J.; De Laurentis, M.; Deléglise, S.; Del Pozzo, W.; Denker, T.; Dent, T.; Dergachev, V.; De Rosa, R.; DeRosa, R. T.; DeSalvo, R.; Devine, R. C.; Dhurandhar, S.; Díaz, M. C.; Di Fiore, L.; Di Giovanni, M.; Di Girolamo, T.; Di Lieto, A.; Di Pace, S.; Di Palma, I.; Di Virgilio, A.; Dolique, V.; Donovan, F.; Dooley, K. L.; Doravari, S.; Douglas, R.; Downes, T. P.; Drago, M.; Drever, R. W. P.; Driggers, J. C.; Ducrot, M.; Dwyer, S. E.; Edo, T. B.; Edwards, M. C.; Effler, A.; Eggenstein, H.-B.; Ehrens, P.; Eichholz, J.; Eikenberry, S. S.; Engels, W.; Essick, R. C.; Etienne, Z.; Etzel, T.; Evans, M.; Evans, T. M.; Everett, R.; Factourovich, M.; Fafone, V.; Fair, H.; Fairhurst, S.; Fan, X.; Fang, Q.; Farinon, S.; Farr, B.; Farr, W. M.; Fauchon-Jones, E.; Favata, M.; Fays, M.; Fehrmann, H.; Fejer, M. M.; Fenyvesi, E.; Ferrante, I.; Ferreira, E. C.; Ferrini, F.; Fidecaro, F.; Fiori, I.; Fiorucci, D.; Fisher, R. P.; Flaminio, R.; Fletcher, M.; Fournier, J.-D.; Frasca, S.; Frasconi, F.; Frei, Z.; Freise, A.; Frey, R.; Frey, V.; Fritschel, P.; Frolov, V. V.; Fulda, P.; Fyffe, M.; Gabbard, H. A. G.; Gaebel, S.; Gair, J. R.; Gammaitoni, L.; Gaonkar, S. G.; Garufi, F.; Gaur, G.; Gehrels, N.; Gemme, G.; Geng, P.; Genin, E.; Gennai, A.; George, J.; Gergely, L.; Germain, V.; Ghosh, Abhirup; Ghosh, Archisman; Ghosh, S.; Giaime, J. A.; Giardina, K. D.; Giazotto, A.; Gill, K.; Glaefke, A.; Goetz, E.; Goetz, R.; Gondan, L.; González, G.; Gonzalez Castro, J. M.; Gopakumar, A.; Gordon, N. A.; Gorodetsky, M. L.; Gossan, S. E.; Gosselin, M.; Gouaty, R.; Grado, A.; Graef, C.; Graff, P. B.; Granata, M.; Grant, A.; Gras, S.; Gray, C.; Greco, G.; Green, A. C.; Groot, P.; Grote, H.; Grunewald, S.; Guidi, G. M.; Guo, X.; Gupta, A.; Gupta, M. K.; Gushwa, K. E.; Gustafson, E. K.; Gustafson, R.; Hacker, J. J.; Hall, B. R.; Hall, E. D.; Hammond, G.; Haney, M.; Hanke, M. M.; Hanks, J.; Hanna, C.; Hannam, M. D.; Hanson, J.; Hardwick, T.; Harms, J.; Harry, G. M.; Harry, I. W.; Hart, M. J.; Hartman, M. T.; Haster, C.-J.; Haughian, K.; Healy, J.; Heidmann, A.; Heintze, M. C.; Heitmann, H.; Hello, P.; Hemming, G.; Hendry, M.; Heng, I. S.; Hennig, J.; Henry, J.; Heptonstall, A. W.; Heurs, M.; Hild, S.; Hoak, D.; Hofman, D.; Holt, K.; Holz, D. E.; Hopkins, P.; Hough, J.; Houston, E. A.; Howell, E. J.; Hu, Y. M.; Huang, S.; Huerta, E. A.; Huet, D.; Hughey, B.; Husa, S.; Huttner, S. H.; Huynh-Dinh, T.; Indik, N.; Ingram, D. R.; Inta, R.; Isa, H. N.; Isac, J.-M.; Isi, M.; Isogai, T.; Iyer, B. R.; Izumi, K.; Jacqmin, T.; Jang, H.; Jani, K.; Jaranowski, P.; Jawahar, S.; Jian, L.; Jiménez-Forteza, F.; Johnson, W. W.; Johnson-McDaniel, N. K.; Jones, D. I.; Jones, R.; Jonker, R. J. G.; Ju, L.; K, Haris; Kalaghatgi, C. V.; Kalogera, V.; Kandhasamy, S.; Kang, G.; Kanner, J. B.; Kapadia, S. J.; Karki, S.; Karvinen, K. S.; Kasprzack, M.; Katsavounidis, E.; Katzman, W.; Kaufer, S.; Kaur, T.; Kawabe, K.; Kéfélian, F.; Kehl, M. S.; Keitel, D.; Kelley, D. B.; Kells, W.; Kennedy, R.; Key, J. S.; Khalili, F. Y.; Khan, I.; Khan, S.; Khan, Z.; Khazanov, E. A.; Kijbunchoo, N.; Kim, Chi-Woong; Kim, Chunglee; Kim, J.; Kim, K.; Kim, N.; Kim, W.; Kim, Y.-M.; Kimbrell, S. J.; King, E. J.; King, P. J.; Kissel, J. S.; Klein, B.; Kleybolte, L.; Klimenko, S.; Koehlenbeck, S. M.; Koley, S.; Kondrashov, V.; Kontos, A.; Korobko, M.; Korth, W. Z.; Kowalska, I.; Kozak, D. B.; Kringel, V.; Królak, A.; Krueger, C.; Kuehn, G.; Kumar, P.; Kumar, R.; Kuo, L.; Kutynia, A.; Lackey, B. D.; Landry, M.; Lange, J.; Lantz, B.; Lasky, P. D.; Laxen, M.; Lazzarini, A.; Lazzaro, C.; Leaci, P.; Leavey, S.; Lebigot, E. O.; Lee, C. H.; Lee, H. K.; Lee, H. M.; Lee, K.; Lenon, A.; Leonardi, M.; Leong, J. R.; Leroy, N.; Letendre, N.; Levin, Y.; Lewis, J. B.; Li, T. G. F.; Libson, A.; Littenberg, T. B.; Lockerbie, N. A.; Lombardi, A. L.; London, L. T.; Lord, J. E.; Lorenzini, M.; Loriette, V.; Lormand, M.; Losurdo, G.; Lough, J. D.; Lousto, C. O.; Lovelace, G.; Lück, H.; Lundgren, A. P.; Lynch, R.; Ma, Y.; Machenschalk, B.; MacInnis, M.; Macleod, D. M.; Magaña-Sandoval, F.; Magaña Zertuche, L.; Magee, R. M.; Majorana, E.; Maksimovic, I.; Malvezzi, V.; Man, N.; Mandic, V.; Mangano, V.; Mansell, G. L.; Manske, M.; Mantovani, M.; Marchesoni, F.; Marion, F.; Márka, S.; Márka, Z.; Markosyan, A. S.; Maros, E.; Martelli, F.; Martellini, L.; Martin, I. W.; Martynov, D. V.; Marx, J. N.; Mason, K.; Masserot, A.; Massinger, T. J.; Masso-Reid, M.; Mastrogiovanni, S.; Matichard, F.; Matone, L.; Mavalvala, N.; Mazumder, N.; McCarthy, R.; McClelland, D. E.; McCormick, S.; McGuire, S. C.; McIntyre, G.; McIver, J.; McManus, D. J.; McRae, T.; McWilliams, S. T.; Meacher, D.; Meadors, G. D.; Meidam, J.; Melatos, A.; Mendell, G.; Mercer, R. A.; Merilh, E. L.; Merzougui, M.; Meshkov, S.; Messenger, C.; Messick, C.; Metzdorff, R.; Meyers, P. M.; Mezzani, F.; Miao, H.; Michel, C.; Middleton, H.; Mikhailov, E. E.; Milano, L.; Miller, A. L.; Miller, A.; Miller, B. B.; Miller, J.; Millhouse, M.; Minenkov, Y.; Ming, J.; Mirshekari, S.; Mishra, C.; Mitra, S.; Mitrofanov, V. P.; Mitselmakher, G.; Mittleman, R.; Moggi, A.; Mohan, M.; Mohapatra, S. R. P.; Montani, M.; Moore, B. C.; Moore, C. J.; Moraru, D.; Moreno, G.; Morriss, S. R.; Mossavi, K.; Mours, B.; Mow-Lowry, C. M.; Mueller, G.; Muir, A. W.; Mukherjee, Arunava; Mukherjee, D.; Mukherjee, S.; Mukund, N.; Mullavey, A.; Munch, J.; Murphy, D. J.; Murray, P. G.; Mytidis, A.; Nardecchia, I.; Naticchioni, L.; Nayak, R. K.; Nedkova, K.; Nelemans, G.; Nelson, T. J. N.; Neri, M.; Neunzert, A.; Newton, G.; Nguyen, T. T.; Nielsen, A. B.; Nissanke, S.; Nitz, A.; Nocera, F.; Nolting, D.; Normandin, M. E. N.; Nuttall, L. K.; Oberling, J.; Ochsner, E.; O'Dell, J.; Oelker, E.; Ogin, G. H.; Oh, J. J.; Oh, S. H.; Ohme, F.; Oliver, M.; Oppermann, P.; Oram, Richard J.; O'Reilly, B.; O'Shaughnessy, R.; Ottaway, D. J.; Overmier, H.; Owen, B. J.; Pai, A.; Pai, S. A.; Palamos, J. R.; Palashov, O.; Palomba, C.; Pal-Singh, A.; Pan, H.; Pankow, C.; Pannarale, F.; Pant, B. C.; Paoletti, F.; Paoli, A.; Papa, M. A.; Paris, H. R.; Parker, W.; Pascucci, D.; Pasqualetti, A.; Passaquieti, R.; Passuello, D.; Patricelli, B.; Patrick, Z.; Pearlstone, B. L.; Pedraza, M.; Pedurand, R.; Pekowsky, L.; Pele, A.; Penn, S.; Perreca, A.; Perri, L. M.; Pfeiffer, H. P.; Phelps, M.; Piccinni, O. J.; Pichot, M.; Piergiovanni, F.; Pierro, V.; Pillant, G.; Pinard, L.; Pinto, I. M.; Pitkin, M.; Poe, M.; Poggiani, R.; Popolizio, P.; Post, A.; Powell, J.; Prasad, J.; Predoi, V.; Prestegard, T.; Price, L. R.; Prijatelj, M.; Principe, M.; Privitera, S.; Prix, R.; Prodi, G. A.; Prokhorov, L.; Puncken, O.; Punturo, M.; Puppo, P.; Pürrer, M.; Qi, H.; Qin, J.; Qiu, S.; Quetschke, V.; Quintero, E. A.; Quitzow-James, R.; Raab, F. J.; Rabeling, D. S.; Radkins, H.; Raffai, P.; Raja, S.; Rajan, C.; Rakhmanov, M.; Rapagnani, P.; Raymond, V.; Razzano, M.; Re, V.; Read, J.; Reed, C. M.; Regimbau, T.; Rei, L.; Reid, S.; Reitze, D. H.; Rew, H.; Reyes, S. D.; Ricci, F.; Riles, K.; Rizzo, M.; Robertson, N. A.; Robie, R.; Robinet, F.; Rocchi, A.; Rolland, L.; Rollins, J. G.; Roma, V. J.; Romano, R.; Romanov, G.; Romie, J. H.; Rosińska, D.; Rowan, S.; Rüdiger, A.; Ruggi, P.; Ryan, K.; Sachdev, S.; Sadecki, T.; Sadeghian, L.; Sakellariadou, M.; Salconi, L.; Saleem, M.; Salemi, F.; Samajdar, A.; Sammut, L.; Sanchez, E. J.; Sandberg, V.; Sandeen, B.; Sanders, J. R.; Sassolas, B.; Sathyaprakash, B. S.; Saulson, P. R.; Sauter, O. E. S.; Savage, R. L.; Sawadsky, A.; Schale, P.; Schilling, R.; Schmidt, J.; Schmidt, P.; Schnabel, R.; Schofield, R. M. S.; Schönbeck, A.; Schreiber, E.; Schuette, D.; Schutz, B. F.; Scott, J.; Scott, S. M.; Sellers, D.; Sengupta, A. S.; Sentenac, D.; Sequino, V.; Sergeev, A.; Setyawati, Y.; Shaddock, D. A.; Shaffer, T.; Shahriar, M. S.; Shaltev, M.; Shapiro, B.; Shawhan, P.; Sheperd, A.; Shoemaker, D. H.; Shoemaker, D. M.; Siellez, K.; Siemens, X.; Sieniawska, M.; Sigg, D.; Silva, A. D.; Singer, A.; Singer, L. P.; Singh, A.; Singh, R.; Singhal, A.; Sintes, A. M.; Slagmolen, B. J. J.; Smith, J. R.; Smith, N. D.; Smith, R. J. E.; Son, E. J.; Sorazu, B.; Sorrentino, F.; Souradeep, T.; Srivastava, A. K.; Staley, A.; Steinke, M.; Steinlechner, J.; Steinlechner, S.; Steinmeyer, D.; Stephens, B. C.; Stevenson, S. P.; Stone, R.; Strain, K. A.; Straniero, N.; Stratta, G.; Strauss, N. A.; Strigin, S.; Sturani, R.; Stuver, A. L.; Summerscales, T. Z.; Sun, L.; Sunil, S.; Sutton, P. J.; Swinkels, B. L.; Szczepańczyk, M. J.; Tacca, M.; Talukder, D.; Tanner, D. B.; Tápai, M.; Tarabrin, S. P.; Taracchini, A.; Taylor, R.; Theeg, T.; Thirugnanasambandam, M. P.; Thomas, E. G.; Thomas, M.; Thomas, P.; Thorne, K. A.; Thorne, K. S.; Thrane, E.; Tiwari, S.; Tiwari, V.; Tokmakov, K. V.; Toland, K.; Tomlinson, C.; Tonelli, M.; Tornasi, Z.; Torres, C. V.; Torrie, C. I.; Töyrä, D.; Travasso, F.; Traylor, G.; Trifirò, D.; Tringali, M. C.; Trozzo, L.; Tse, M.; Turconi, M.; Tuyenbayev, D.; Ugolini, D.; Unnikrishnan, C. S.; Urban, A. L.; Usman, S. A.; Vahlbruch, H.; Vajente, G.; Valdes, G.; Vallisneri, M.; van Bakel, N.; van Beuzekom, M.; van den Brand, J. F. J.; Van Den Broeck, C.; Vander-Hyde, D. C.; van der Schaaf, L.; van der Sluys, M. V.; van Heijningen, J. V.; Vano-Vinuales, A.; van Veggel, A. A.; Vardaro, M.; Vass, S.; Vasúth, M.; Vaulin, R.; Vecchio, A.; Vedovato, G.; Veitch, J.; Veitch, P. J.; Venkateswara, K.; Verkindt, D.; Vetrano, F.; Viceré, A.; Vinciguerra, S.; Vine, D. J.; Vinet, J.-Y.; Vitale, S.; Vo, T.; Vocca, H.; Vorvick, C.; Voss, D. V.; Vousden, W. D.; Vyatchanin, S. P.; Wade, A. R.; Wade, L. E.; Wade, M.; Walker, M.; Wallace, L.; Walsh, S.; Wang, G.; Wang, H.; Wang, M.; Wang, X.; Wang, Y.; Ward, R. L.; Warner, J.; Was, M.; Weaver, B.; Wei, L.-W.; Weinert, M.; Weinstein, A. J.; Weiss, R.; Wen, L.; Weßels, P.; Westphal, T.; Wette, K.; Whelan, J. T.; Whiting, B. F.; Williams, R. D.; Williamson, A. R.; Willis, J. L.; Willke, B.; Wimmer, M. H.; Winkler, W.; Wipf, C. C.; Wittel, H.; Woan, G.; Woehler, J.; Worden, J.; Wright, J. L.; Wu, D. S.; Wu, G.; Yablon, J.; Yam, W.; Yamamoto, H.; Yancey, C. C.; Yu, H.; Yvert, M.; ZadroŻny, A.; Zangrando, L.; Zanolin, M.; Zendri, J.-P.; Zevin, M.; Zhang, L.; Zhang, M.; Zhang, Y.; Zhao, C.; Zhou, M.; Zhou, Z.; Zhu, X. J.; Zucker, M. E.; Zuraw, S. E.; Zweizig, J.; Boyle, M.; Brügmann, B.; Campanelli, M.; Chu, T.; Clark, M.; Haas, R.; Hemberger, D.; Hinder, I.; Kidder, L. E.; Kinsey, M.; Laguna, P.; Ossokine, S.; Pan, Y.; Röver, C.; Scheel, M.; Szilagyi, B.; Teukolsky, S.; Zlochower, Y.; LIGO Scientific Collaboration; Virgo Collaboration

    2016-10-01

    This paper presents updated estimates of source parameters for GW150914, a binary black-hole coalescence event detected by the Laser Interferometer Gravitational-wave Observatory (LIGO) in 2015 [Abbott et al. Phys. Rev. Lett. 116, 061102 (2016).]. Abbott et al. [Phys. Rev. Lett. 116, 241102 (2016).] presented parameter estimation of the source using a 13-dimensional, phenomenological precessing-spin model (precessing IMRPhenom) and an 11-dimensional nonprecessing effective-one-body (EOB) model calibrated to numerical-relativity simulations, which forces spin alignment (nonprecessing EOBNR). Here, we present new results that include a 15-dimensional precessing-spin waveform model (precessing EOBNR) developed within the EOB formalism. We find good agreement with the parameters estimated previously [Abbott et al. Phys. Rev. Lett. 116, 241102 (2016).], and we quote updated component masses of 35-3+5 M⊙ and 3 0-4+3 M⊙ (where errors correspond to 90% symmetric credible intervals). We also present slightly tighter constraints on the dimensionless spin magnitudes of the two black holes, with a primary spin estimate <0.65 and a secondary spin estimate <0.75 at 90% probability. Abbott et al. [Phys. Rev. Lett. 116, 241102 (2016).] estimated the systematic parameter-extraction errors due to waveform-model uncertainty by combining the posterior probability densities of precessing IMRPhenom and nonprecessing EOBNR. Here, we find that the two precessing-spin models are in closer agreement, suggesting that these systematic errors are smaller than previously quoted.

  12. A Well-Calibrated Ocean Algorithm for Special Sensor Microwave/Imager

    NASA Technical Reports Server (NTRS)

    Wentz, Frank J.

    1997-01-01

    I describe an algorithm for retrieving geophysical parameters over the ocean from special sensor microwave/imager (SSM/I) observations. This algorithm is based on a model for the brightness temperature T(sub B) of the ocean and intervening atmosphere. The retrieved parameters are the near-surface wind speed W, the columnar water vapor V, the columnar cloud liquid water L, and the line-of-sight wind W(sub LS). I restrict my analysis to ocean scenes free of rain, and when the algorithm detects rain, the retrievals are discarded. The model and algorithm are precisely calibrated using a very large in situ database containing 37,650 SSM/I overpasses of buoys and 35,108 overpasses of radiosonde sites. A detailed error analysis indicates that the T(sub B) model rms accuracy is between 0.5 and 1 K and that the rms retrieval accuracies for wind, vapor, and cloud are 0.9 m/s, 1.2 mm, and 0.025 mm, respectively. The error in specifying the cloud temperature will introduce an additional 10% error in the cloud water retrieval. The spatial resolution for these accuracies is 50 km. The systematic errors in the retrievals are smaller than the rms errors, being about 0.3 m/s, 0.6 mm, and 0.005 mm for W, V, and L, respectively. The one exception is the systematic error in wind speed of -1.0 m/s that occurs for observations within +/-20 deg of upwind. The inclusion of the line-of-sight wind W(sub LS) in the retrieval significantly reduces the error in wind speed due to wind direction variations. The wind error for upwind observations is reduced from -3.0 to -1.0 m/s. Finally, I find a small signal in the 19-GHz, horizontal polarization (h(sub pol) T(sub B) residual DeltaT(sub BH) that is related to the effective air pressure of the water vapor profile. This information may be of some use in specifying the vertical distribution of water vapor.

  13. Medium-range Performance of the Global NWP Model

    NASA Astrophysics Data System (ADS)

    Kim, J.; Jang, T.; Kim, J.; Kim, Y.

    2017-12-01

    The medium-range performance of the global numerical weather prediction (NWP) model in the Korea Meteorological Administration (KMA) is investigated. The performance is based on the prediction of the extratropical circulation. The mean square error is expressed by sum of spatial variance of discrepancy between forecasts and observations and the square of the mean error (ME). Thus, it is important to investigate the ME effect in order to understand the model performance. The ME is expressed by the subtraction of an anomaly from forecast difference against the real climatology. It is found that the global model suffers from a severe systematic ME in medium-range forecasts. The systematic ME is dominant in the entire troposphere in all months. Such ME can explain at most 25% of root mean square error. We also compare the extratropical ME distribution with that from other NWP centers. NWP models exhibit similar spatial ME structure each other. It is found that the spatial ME pattern is highly correlated to that of an anomaly, implying that the ME varies with seasons. For example, the correlation coefficient between ME and anomaly ranges from -0.51 to -0.85 by months. The pattern of the extratropical circulation also has a high correlation to an anomaly. The global model has trouble in faithfully simulating extratropical cyclones and blockings in the medium-range forecast. In particular, the model has a hard to simulate an anomalous event in medium-range forecasts. If we choose an anomalous period for a test-bed experiment, we will suffer from a large error due to an anomaly.

  14. WE-H-BRC-08: Examining Credentialing Criteria and Poor Performance Indicators for IROC Houston’s Anthropomorphic Head and Neck Phantom

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Carson, M; Molineu, A; Taylor, P

    Purpose: To analyze the most recent results of IROC Houston’s anthropomorphic H&N phantom to determine the nature of failing irradiations and the feasibility of altering pass/fail credentialing criteria. Methods: IROC Houston’s H&N phantom, used for IMRT credentialing for NCI-sponsored clinical trials, requires that an institution’s treatment plan must agree with measurement within 7% (TLD doses) and ≥85% pixels must pass 7%/4 mm gamma analysis. 156 phantom irradiations (November 2014 – October 2015) were re-evaluated using tighter criteria: 1) 5% TLD and 5%/4 mm, 2) 5% TLD and 5%/3 mm, 3) 4% TLD and 4%/4 mm, and 4) 3% TLD andmore » 3%/3 mm. Failure/poor performance rates were evaluated with respect to individual film and TLD performance by location in the phantom. Overall poor phantom results were characterized qualitatively as systematic (dosimetric) errors, setup errors/positional shifts, global but non-systematic errors, and errors affecting only a local region. Results: The pass rate for these phantoms using current criteria is 90%. Substituting criteria 1-4 reduces the overall pass rate to 77%, 70%, 63%, and 37%, respectively. Statistical analyses indicated the probability of noise-induced TLD failure at the 5% criterion was <0.5%. Using criteria 1, TLD results were most often the cause of failure (86% failed TLD while 61% failed film), with most failures identified in the primary PTV (77% cases). Other criteria posed similar results. Irradiations that failed from film only were overwhelmingly associated with phantom shifts/setup errors (≥80% cases). Results failing criteria 1 were primarily diagnosed as systematic: 58% of cases. 11% were setup/positioning errors, 8% were global non-systematic errors, and 22% were local errors. Conclusion: This study demonstrates that 5% TLD and 5%/4 mm gamma criteria may be both practically and theoretically achievable. Further work is necessary to diagnose and resolve dosimetric inaccuracy in these trials, particularly for systematic dose errors. This work is funded by NCI Grant CA180803.« less

  15. UNDERSTANDING SYSTEMATIC MEASUREMENT ERROR IN THERMAL-OPTICAL ANALYSIS FOR PM BLACK CARBON USING RESPONSE SURFACES AND SURFACE CONFIDENCE INTERVALS

    EPA Science Inventory

    Results from a NIST-EPA Interagency Agreement on Understanding Systematic Measurement Error in Thermal-Optical Analysis for PM Black Carbon Using Response Surfaces and Surface Confidence Intervals will be presented at the American Association for Aerosol Research (AAAR) 24th Annu...

  16. Variation across mitochondrial gene trees provides evidence for systematic error: How much gene tree variation is biological?

    PubMed

    Richards, Emilie J; Brown, Jeremy M; Barley, Anthony J; Chong, Rebecca A; Thomson, Robert C

    2018-02-19

    The use of large genomic datasets in phylogenetics has highlighted extensive topological variation across genes. Much of this discordance is assumed to result from biological processes. However, variation among gene trees can also be a consequence of systematic error driven by poor model fit, and the relative importance of biological versus methodological factors in explaining gene tree variation is a major unresolved question. Using mitochondrial genomes to control for biological causes of gene tree variation, we estimate the extent of gene tree discordance driven by systematic error and employ posterior prediction to highlight the role of model fit in producing this discordance. We find that the amount of discordance among mitochondrial gene trees is similar to the amount of discordance found in other studies that assume only biological causes of variation. This similarity suggests that the role of systematic error in generating gene tree variation is underappreciated and critical evaluation of fit between assumed models and the data used for inference is important for the resolution of unresolved phylogenetic questions.

  17. The accuracy of the measurements in Ulugh Beg's star catalogue

    NASA Astrophysics Data System (ADS)

    Krisciunas, K.

    1992-12-01

    The star catalogue compiled by Ulugh Beg and his collaborators in Samarkand (ca. 1437) is the only catalogue primarily based on original observations between the times of Ptolemy and Tycho Brahe. Evans (1987) has given convincing evidence that Ulugh Beg's star catalogue was based on measurements made with a zodiacal armillary sphere graduated to 15(') , with interpolation to 0.2 units. He and Shevchenko (1990) were primarily interested in the systematic errors in ecliptic longitude. Shevchenko's analysis of the random errors was limited to the twelve zodiacal constellations. We have analyzed all 843 ecliptic longitudes and latitudes attributed to Ulugh Beg by Knobel (1917). This required multiplying all the longitude errors by the respective values of the cosine of the celestial latitudes. We find a random error of +/- 17minp 7 for ecliptic longitude and +/- 16minp 5 for ecliptic latitude. On the whole, the random errors are largest near the ecliptic, decreasing towards the ecliptic poles. For all of Ulugh Beg's measurements (excluding outliers) the mean systematic error is -10minp 8 +/- 0minp 8 for ecliptic longitude and 7minp 5 +/- 0minp 7 for ecliptic latitude, with the errors in the sense ``computed minus Ulugh Beg''. For the brighter stars (those designated alpha , beta , and gamma in the respective constellations), the mean systematic errors are -11minp 3 +/- 1minp 9 for ecliptic longitude and 9minp 4 +/- 1minp 5 for ecliptic latitude. Within the errors this matches the systematic error in both coordinates for alpha Vir. With greater confidence we may conclude that alpha Vir was the principal reference star in the catalogues of Ulugh Beg and Ptolemy. Evans, J. 1987, J. Hist. Astr. 18, 155. Knobel, E. B. 1917, Ulugh Beg's Catalogue of Stars, Washington, D. C.: Carnegie Institution. Shevchenko, M. 1990, J. Hist. Astr. 21, 187.

  18. Unaccounted source of systematic errors in measurements of the Newtonian gravitational constant G

    NASA Astrophysics Data System (ADS)

    DeSalvo, Riccardo

    2015-06-01

    Many precision measurements of G have produced a spread of results incompatible with measurement errors. Clearly an unknown source of systematic errors is at work. It is proposed here that most of the discrepancies derive from subtle deviations from Hooke's law, caused by avalanches of entangled dislocations. The idea is supported by deviations from linearity reported by experimenters measuring G, similarly to what is observed, on a larger scale, in low-frequency spring oscillators. Some mitigating experimental apparatus modifications are suggested.

  19. The Gnomon Experiment

    NASA Astrophysics Data System (ADS)

    Krisciunas, Kevin

    2007-12-01

    A gnomon, or vertical pointed stick, can be used to determine the north-south direction at a site, as well as one's latitude. If one has accurate time and knows one's time zone, it is also possible to determine one's longitude. From observations on the first day of winter and the first day of summer one can determine the obliquity of the ecliptic. Since we can obtain accurate geographical coordinates from Google Earth or a GPS device, analysis of set of shadow length measurements can be used by students to learn about astronomical coordinate systems, time systems, systematic errors, and random errors. Systematic latitude errors of student datasets are typically 30 nautical miles (0.5 degree) or more, but with care one can achieve systematic and random errors less than 8 nautical miles. One of the advantages of this experiment is that it can be carried out during the day. Also, it is possible to determine if a student has made up his data.

  20. Testing Scientific Software: A Systematic Literature Review.

    PubMed

    Kanewala, Upulee; Bieman, James M

    2014-10-01

    Scientific software plays an important role in critical decision making, for example making weather predictions based on climate models, and computation of evidence for research publications. Recently, scientists have had to retract publications due to errors caused by software faults. Systematic testing can identify such faults in code. This study aims to identify specific challenges, proposed solutions, and unsolved problems faced when testing scientific software. We conducted a systematic literature survey to identify and analyze relevant literature. We identified 62 studies that provided relevant information about testing scientific software. We found that challenges faced when testing scientific software fall into two main categories: (1) testing challenges that occur due to characteristics of scientific software such as oracle problems and (2) testing challenges that occur due to cultural differences between scientists and the software engineering community such as viewing the code and the model that it implements as inseparable entities. In addition, we identified methods to potentially overcome these challenges and their limitations. Finally we describe unsolved challenges and how software engineering researchers and practitioners can help to overcome them. Scientific software presents special challenges for testing. Specifically, cultural differences between scientist developers and software engineers, along with the characteristics of the scientific software make testing more difficult. Existing techniques such as code clone detection can help to improve the testing process. Software engineers should consider special challenges posed by scientific software such as oracle problems when developing testing techniques.

  1. Evaluation of seasonal and spatial variations of lumped water balance model sensitivity to precipitation data errors

    NASA Astrophysics Data System (ADS)

    Xu, Chong-yu; Tunemar, Liselotte; Chen, Yongqin David; Singh, V. P.

    2006-06-01

    Sensitivity of hydrological models to input data errors have been reported in the literature for particular models on a single or a few catchments. A more important issue, i.e. how model's response to input data error changes as the catchment conditions change has not been addressed previously. This study investigates the seasonal and spatial effects of precipitation data errors on the performance of conceptual hydrological models. For this study, a monthly conceptual water balance model, NOPEX-6, was applied to 26 catchments in the Mälaren basin in Central Sweden. Both systematic and random errors were considered. For the systematic errors, 5-15% of mean monthly precipitation values were added to the original precipitation to form the corrupted input scenarios. Random values were generated by Monte Carlo simulation and were assumed to be (1) independent between months, and (2) distributed according to a Gaussian law of zero mean and constant standard deviation that were taken as 5, 10, 15, 20, and 25% of the mean monthly standard deviation of precipitation. The results show that the response of the model parameters and model performance depends, among others, on the type of the error, the magnitude of the error, physical characteristics of the catchment, and the season of the year. In particular, the model appears less sensitive to the random error than to the systematic error. The catchments with smaller values of runoff coefficients were more influenced by input data errors than were the catchments with higher values. Dry months were more sensitive to precipitation errors than were wet months. Recalibration of the model with erroneous data compensated in part for the data errors by altering the model parameters.

  2. Evolution of errors in the altimetric bathymetry model used by Google Earth and GEBCO

    NASA Astrophysics Data System (ADS)

    Marks, K. M.; Smith, W. H. F.; Sandwell, D. T.

    2010-09-01

    We analyze errors in the global bathymetry models of Smith and Sandwell that combine satellite altimetry with acoustic soundings and shorelines to estimate depths. Versions of these models have been incorporated into Google Earth and the General Bathymetric Chart of the Oceans (GEBCO). We use Japan Agency for Marine-Earth Science and Technology (JAMSTEC) multibeam surveys not previously incorporated into the models as "ground truth" to compare against model versions 7.2 through 12.1, defining vertical differences as "errors." Overall error statistics improve over time: 50th percentile errors declined from 57 to 55 to 49 m, and 90th percentile errors declined from 257 to 235 to 219 m, in versions 8.2, 11.1 and 12.1. This improvement is partly due to an increasing number of soundings incorporated into successive models, and partly to improvements in the satellite gravity model. Inspection of specific sites reveals that changes in the algorithms used to interpolate across survey gaps with altimetry have affected some errors. Versions 9.1 through 11.1 show a bias in the scaling from gravity in milliGals to topography in meters that affected the 15-160 km wavelength band. Regionally averaged (>160 km wavelength) depths have accumulated error over successive versions 9 through 11. These problems have been mitigated in version 12.1, which shows no systematic variation of errors with depth. Even so, version 12.1 is in some respects not as good as version 8.2, which employed a different algorithm.

  3. Local systematic differences in 2MASS positions

    NASA Astrophysics Data System (ADS)

    Bustos Fierro, I. H.; Calderón, J. H.

    2018-01-01

    We have found that positions in the 2MASS All-sky Catalog of Point Sources show local systematic differences with characteristic length-scales of ˜ 5 to ˜ 8 arcminutes when compared with several catalogs. We have observed that when 2MASS positions are used in the computation of proper motions, the mentioned systematic differences cause systematic errors in the resulting proper motions. We have developed a method to locally rectify 2MASS with respect to UCAC4 in order to diminish the systematic differences between these catalogs. The rectified 2MASS catalog with the proposed method can be regarded as an extension of UCAC4 for astrometry with accuracy ˜ 90 mas in its positions, with negligible systematic errors. Also we show that the use of these rectified positions removes the observed systematic pattern in proper motions derived from original 2MASS positions.

  4. SU-E-CAMPUS-J-05: Quantitative Investigation of Random and Systematic Uncertainties From Hardware and Software Components in the Frameless 6DBrainLAB ExacTrac System

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Keeling, V; Jin, H; Hossain, S

    2014-06-15

    Purpose: To evaluate setup accuracy and quantify individual systematic and random errors for the various hardware and software components of the frameless 6D-BrainLAB ExacTrac system. Methods: 35 patients with cranial lesions, some with multiple isocenters (50 total lesions treated in 1, 3, 5 fractions), were investigated. All patients were simulated with a rigid head-and-neck mask and the BrainLAB localizer. CT images were transferred to the IPLAN treatment planning system where optimized plans were generated using stereotactic reference frame based on the localizer. The patients were setup initially with infrared (IR) positioning ExacTrac system. Stereoscopic X-ray images (XC: X-ray Correction) weremore » registered to their corresponding digitally-reconstructed-radiographs, based on bony anatomy matching, to calculate 6D-translational and rotational (Lateral, Longitudinal, Vertical, Pitch, Roll, Yaw) shifts. XC combines systematic errors of the mask, localizer, image registration, frame, and IR. If shifts were below tolerance (0.7 mm translational and 1 degree rotational), treatment was initiated; otherwise corrections were applied and additional X-rays were acquired to verify patient position (XV: X-ray Verification). Statistical analysis was used to extract systematic and random errors of the different components of the 6D-ExacTrac system and evaluate the cumulative setup accuracy. Results: Mask systematic errors (translational; rotational) were the largest and varied from one patient to another in the range (−15 to 4mm; −2.5 to 2.5degree) obtained from mean of XC for each patient. Setup uncertainty in IR positioning (0.97,2.47,1.62mm;0.65,0.84,0.96degree) was extracted from standard-deviation of XC. Combined systematic errors of the frame and localizer (0.32,−0.42,−1.21mm; −0.27,0.34,0.26degree) was extracted from mean of means of XC distributions. Final patient setup uncertainty was obtained from the standard deviations of XV (0.57,0.77,0.67mm,0.39,0.35,0.30degree). Conclusion: Statistical analysis was used to calculate cumulative and individual systematic errors from the different hardware and software components of the 6D-ExacTrac-system. Patients were treated with cumulative errors (<1mm,<1degree) with XV image guidance.« less

  5. Optimal surveys for weak-lensing tomography

    NASA Astrophysics Data System (ADS)

    Amara, Adam; Réfrégier, Alexandre

    2007-11-01

    Weak-lensing surveys provide a powerful probe of dark energy through the measurement of the mass distribution of the local Universe. A number of ground-based and space-based surveys are being planned for this purpose. Here, we study the optimal strategy for these future surveys using the joint constraints on the equation-of-state parameter wn and its evolution wa as a figure of merit by considering power spectrum tomography. For this purpose, we first consider an `ideal' survey which is both wide and deep and exempt from systematics. We find that such a survey has great potential for dark energy studies, reaching 1σ precisions of 1 and 10 per cent on the two parameters, respectively. We then study the relative impact of various limitations by degrading this ideal survey. In particular, we consider the effect of sky coverage, survey depth, shape measurement systematics, photometric redshift systematics and uncertainties in the non-linear power spectrum predictions. We find that, for a given observing time, it is always advantageous to choose a wide rather than a deep survey geometry. We also find that the dark energy constraints from power spectrum tomography are robust to photometric redshift errors and catastrophic failures, if a spectroscopic calibration sample of 104-105 galaxies are available. The impact of these systematics is small compared to the limitations that come from potential uncertainties in the power spectrum, due to shear measurement and theoretical errors. To help the planning of future surveys, we summarize our results with comprehensive scaling relations which avoid the need for full Fisher matrix calculations.

  6. Medication errors in the Middle East countries: a systematic review of the literature.

    PubMed

    Alsulami, Zayed; Conroy, Sharon; Choonara, Imti

    2013-04-01

    Medication errors are a significant global concern and can cause serious medical consequences for patients. Little is known about medication errors in Middle Eastern countries. The objectives of this systematic review were to review studies of the incidence and types of medication errors in Middle Eastern countries and to identify the main contributory factors involved. A systematic review of the literature related to medication errors in Middle Eastern countries was conducted in October 2011 using the following databases: Embase, Medline, Pubmed, the British Nursing Index and the Cumulative Index to Nursing & Allied Health Literature. The search strategy included all ages and languages. Inclusion criteria were that the studies assessed or discussed the incidence of medication errors and contributory factors to medication errors during the medication treatment process in adults or in children. Forty-five studies from 10 of the 15 Middle Eastern countries met the inclusion criteria. Nine (20 %) studies focused on medication errors in paediatric patients. Twenty-one focused on prescribing errors, 11 measured administration errors, 12 were interventional studies and one assessed transcribing errors. Dispensing and documentation errors were inadequately evaluated. Error rates varied from 7.1 % to 90.5 % for prescribing and from 9.4 % to 80 % for administration. The most common types of prescribing errors reported were incorrect dose (with an incidence rate from 0.15 % to 34.8 % of prescriptions), wrong frequency and wrong strength. Computerised physician rder entry and clinical pharmacist input were the main interventions evaluated. Poor knowledge of medicines was identified as a contributory factor for errors by both doctors (prescribers) and nurses (when administering drugs). Most studies did not assess the clinical severity of the medication errors. Studies related to medication errors in the Middle Eastern countries were relatively few in number and of poor quality. Educational programmes on drug therapy for doctors and nurses are urgently needed.

  7. On-board error correction improves IR earth sensor accuracy

    NASA Astrophysics Data System (ADS)

    Alex, T. K.; Kasturirangan, K.; Shrivastava, S. K.

    1989-10-01

    Infra-red earth sensors are used in satellites for attitude sensing. Their accuracy is limited by systematic and random errors. The sources of errors in a scanning infra-red earth sensor are analyzed in this paper. The systematic errors arising from seasonal variation of infra-red radiation, oblate shape of the earth, ambient temperature of sensor, changes in scan/spin rates have been analyzed. Simple relations are derived using least square curve fitting for on-board correction of these errors. Random errors arising out of noise from detector and amplifiers, instability of alignment and localized radiance anomalies are analyzed and possible correction methods are suggested. Sun and Moon interference on earth sensor performance has seriously affected a number of missions. The on-board processor detects Sun/Moon interference and corrects the errors on-board. It is possible to obtain eight times improvement in sensing accuracy, which will be comparable with ground based post facto attitude refinement.

  8. Influence of radioactivity out of the field of view on 3D PET dynamic measurement with [/sup 11/C]MP4A

    NASA Astrophysics Data System (ADS)

    Hasegawa, T.; Suzuki, M.; Murayama, H.; Irie, T.; Fukushi, K.; Wada, Y.

    1999-08-01

    This study assessed the influence of radioactivity out of the field of view (out-of-FOV) on the measurement of brain acetylcholinesterase (AChE) activity with the tracer [/sup 11/C]N-methyl-4-piperidyl-acetate by positron emission tomography in three-dimensional mode. Dynamic scans on a volunteer showed that the out-of-FOV radioactivity in the chest was much higher than that of the brain immediately after tracer injection. A representative phantom measurement was performed to quantitate the systematic errors due to the out-of-FOV radioactivity. Resultant errors in the AChE activity (k3 parameter) as calculated by compartment model analysis were found to be less than one percent in all of the brain regions studied.

  9. Patient disclosure of medical errors in paediatrics: A systematic literature review

    PubMed Central

    Koller, Donna; Rummens, Anneke; Le Pouesard, Morgane; Espin, Sherry; Friedman, Jeremy; Coffey, Maitreya; Kenneally, Noah

    2016-01-01

    Medical errors are common within paediatrics; however, little research has examined the process of disclosing medical errors in paediatric settings. The present systematic review of current research and policy initiatives examined evidence regarding the disclosure of medical errors involving paediatric patients. Peer-reviewed research from a range of scientific journals from the past 10 years is presented, and an overview of Canadian and international policies regarding disclosure in paediatric settings are provided. The purpose of the present review was to scope the existing literature and policy, and to synthesize findings into an integrated and accessible report. Future research priorities and policy implications are then identified. PMID:27429578

  10. Assessment of Systematic Chromatic Errors that Impact Sub-1% Photometric Precision in Large-Area Sky Surveys

    DOE PAGES

    Li, T. S.; DePoy, D. L.; Marshall, J. L.; ...

    2016-06-01

    Here, we report that meeting the science goals for many current and future ground-based optical large-area sky surveys requires that the calibrated broadband photometry is both stable in time and uniform over the sky to 1% precision or better. Past and current surveys have achieved photometric precision of 1%–2% by calibrating the survey's stellar photometry with repeated measurements of a large number of stars observed in multiple epochs. The calibration techniques employed by these surveys only consider the relative frame-by-frame photometric zeropoint offset and the focal plane position-dependent illumination corrections, which are independent of the source color. However, variations inmore » the wavelength dependence of the atmospheric transmission and the instrumental throughput induce source color-dependent systematic errors. These systematic errors must also be considered to achieve the most precise photometric measurements. In this paper, we examine such systematic chromatic errors (SCEs) using photometry from the Dark Energy Survey (DES) as an example. We first define a natural magnitude system for DES and calculate the systematic errors on stellar magnitudes when the atmospheric transmission and instrumental throughput deviate from the natural system. We conclude that the SCEs caused by the change of airmass in each exposure, the change of the precipitable water vapor and aerosol in the atmosphere over time, and the non-uniformity of instrumental throughput over the focal plane can be up to 2% in some bandpasses. We then compare the calculated SCEs with the observed DES data. For the test sample data, we correct these errors using measurements of the atmospheric transmission and instrumental throughput from auxiliary calibration systems. In conclusion, the residual after correction is less than 0.3%. Moreover, we calculate such SCEs for Type Ia supernovae and elliptical galaxies and find that the chromatic errors for non-stellar objects are redshift-dependent and can be larger than those for stars at certain redshifts.« less

  11. The Calibration System of the E989 Experiment at Fermilab

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Anastasi, Antonio

    The muon anomaly aµ is one of the most precise quantity known in physics experimentally and theoretically. The high level of accuracy permits to use the measurement of aµ as a test of the Standard Model comparing with the theoretical calculation. After the impressive result obtained at Brookhaven National Laboratory in 2001 with a total accuracy of 0.54 ppm, a new experiment E989 is under construction at Fermilab, motivated by the diff of aexp SM µ - aµ ~ 3σ. The purpose of the E989 experiment is a fourfold reduction of the error, with a goal of 0.14 ppm,more » improving both the systematic and statistical uncertainty. With the use of the Fermilab beam complex a statistic of × 21 with respect to BNL will be reached in almost 2 years of data taking improving the statistical uncertainty to 0.1 ppm. Improvement on the systematic error involves the measurement technique of ωa and ωp, the anomalous precession frequency of the muon and the Larmor precession frequency of the proton respectively. The measurement of ωp involves the magnetic field measurement and improvements on this sector related to the uniformity of the field should reduce the systematic uncertainty with respect to BNL from 170 ppb to 70 ppb. A reduction from 180 ppb to 70 ppb is also required for the measurement of ωa; new DAQ, a faster electronics and new detectors and calibration system will be implemented with respect to E821 to reach this goal. In particular the laser calibration system will reduce the systematic error due to gain fl of the photodetectors from 0.12 to 0.02 ppm. The 0.02 ppm limit on systematic requires a system with a stability of 10 -4 on short time scale (700 µs) while on longer time scale the stability is at the percent level. The 10 -4 stability level required is almost an order of magnitude better than the existing laser calibration system in particle physics, making the calibration system a very challenging item. In addition to the high level of stability a particular environment, due to the presence of a 14 m diameter storage ring, a highly uniform magnetic field and the detector distribution around the storage ring, set specific guidelines and constraints. This thesis will focus on the final design of the Laser Calibration System developed for the E989 experiment. Chapter 1 introduces the subject of the anomalous magnetic moment of the muon; chapter 2 presents previous measurement of g -2, while chapter 3 discusses the Standard Model prediction and possible new physics scenario. Chapter 4 describes the E989 experiment. In this chapter will be described the experimental technique and also will be presented the experimental apparatus focusing on the improvements necessary to reduce the statistical and systematic errors. The main item of the thesis is discussed in the last two chapters: chapter 5 is focused on the Laser Calibration system while chapter 6 describes the Test Beam performed at the Beam Test Facility of Laboratori Nazionali di Frascati from the 29th February to the 7th March as a final test for the full calibrations system. An introduction explain the physics motivation of the system and the diff t devices implemented. In the final chapter the setup used will be described and some of the results obtained will be presented.« less

  12. Medication errors in chemotherapy preparation and administration: a survey conducted among oncology nurses in Turkey.

    PubMed

    Ulas, Arife; Silay, Kamile; Akinci, Sema; Dede, Didem Sener; Akinci, Muhammed Bulent; Sendur, Mehmet Ali Nahit; Cubukcu, Erdem; Coskun, Hasan Senol; Degirmenci, Mustafa; Utkan, Gungor; Ozdemir, Nuriye; Isikdogan, Abdurrahman; Buyukcelik, Abdullah; Inanc, Mevlude; Bilici, Ahmet; Odabasi, Hatice; Cihan, Sener; Avci, Nilufer; Yalcin, Bulent

    2015-01-01

    Medication errors in oncology may cause severe clinical problems due to low therapeutic indices and high toxicity of chemotherapeutic agents. We aimed to investigate unintentional medication errors and underlying factors during chemotherapy preparation and administration based on a systematic survey conducted to reflect oncology nurses experience. This study was conducted in 18 adult chemotherapy units with volunteer participation of 206 nurses. A survey developed by primary investigators and medication errors (MAEs) defined preventable errors during prescription of medication, ordering, preparation or administration. The survey consisted of 4 parts: demographic features of nurses; workload of chemotherapy units; errors and their estimated monthly number during chemotherapy preparation and administration; and evaluation of the possible factors responsible from ME. The survey was conducted by face to face interview and data analyses were performed with descriptive statistics. Chi-square or Fisher exact tests were used for a comparative analysis of categorical data. Some 83.4% of the 210 nurses reported one or more than one error during chemotherapy preparation and administration. Prescribing or ordering wrong doses by physicians (65.7%) and noncompliance with administration sequences during chemotherapy administration (50.5%) were the most common errors. The most common estimated average monthly error was not following the administration sequence of the chemotherapeutic agents (4.1 times/month, range 1-20). The most important underlying reasons for medication errors were heavy workload (49.7%) and insufficient number of staff (36.5%). Our findings suggest that the probability of medication error is very high during chemotherapy preparation and administration, the most common involving prescribing and ordering errors. Further studies must address the strategies to minimize medication error in chemotherapy receiving patients, determine sufficient protective measures and establishing multistep control mechanisms.

  13. Prescribing Errors Involving Medication Dosage Forms

    PubMed Central

    Lesar, Timothy S

    2002-01-01

    CONTEXT Prescribing errors involving medication dose formulations have been reported to occur frequently in hospitals. No systematic evaluations of the characteristics of errors related to medication dosage formulation have been performed. OBJECTIVE To quantify the characteristics, frequency, and potential adverse patient effects of prescribing errors involving medication dosage forms . DESIGN Evaluation of all detected medication prescribing errors involving or related to medication dosage forms in a 631-bed tertiary care teaching hospital. MAIN OUTCOME MEASURES Type, frequency, and potential for adverse effects of prescribing errors involving or related to medication dosage forms. RESULTS A total of 1,115 clinically significant prescribing errors involving medication dosage forms were detected during the 60-month study period. The annual number of detected errors increased throughout the study period. Detailed analysis of the 402 errors detected during the last 16 months of the study demonstrated the most common errors to be: failure to specify controlled release formulation (total of 280 cases; 69.7%) both when prescribing using the brand name (148 cases; 36.8%) and when prescribing using the generic name (132 cases; 32.8%); and prescribing controlled delivery formulations to be administered per tube (48 cases; 11.9%). The potential for adverse patient outcome was rated as potentially “fatal or severe” in 3 cases (0.7%), and “serious” in 49 cases (12.2%). Errors most commonly involved cardiovascular agents (208 cases; 51.7%). CONCLUSIONS Hospitalized patients are at risk for adverse outcomes due to prescribing errors related to inappropriate use of medication dosage forms. This information should be considered in the development of strategies to prevent adverse patient outcomes resulting from such errors. PMID:12213138

  14. Flux control coefficients determined by inhibitor titration: the design and analysis of experiments to minimize errors.

    PubMed Central

    Small, J R

    1993-01-01

    This paper is a study into the effects of experimental error on the estimated values of flux control coefficients obtained using specific inhibitors. Two possible techniques for analysing the experimental data are compared: a simple extrapolation method (the so-called graph method) and a non-linear function fitting method. For these techniques, the sources of systematic errors are identified and the effects of systematic and random errors are quantified, using both statistical analysis and numerical computation. It is shown that the graph method is very sensitive to random errors and, under all conditions studied, that the fitting method, even under conditions where the assumptions underlying the fitted function do not hold, outperformed the graph method. Possible ways of designing experiments to minimize the effects of experimental errors are analysed and discussed. PMID:8257434

  15. Experiments on Frequency Dependence of the Deflection of Light in Yang-Mills Gravity

    NASA Astrophysics Data System (ADS)

    Hao, Yun; Zhu, Yiyi; Hsu, Jong-Ping

    2018-01-01

    In Yang-Mills gravity based on flat space-time, the eikonal equation for a light ray is derived from the modified Maxwell's wave equations in the geometric-optics limit. One obtains a Hamilton-Jacobi type equation, GLµv∂µΨ∂vΨ = 0 with an effective Riemannian metric tensor GLµv. According to Yang-Mills gravity, light rays (and macroscopic objects) move as if they were in an effective curved space-time with a metric tensor. The deflection angle of a light ray by the sun is about 1.53″ for experiments with optical frequencies ≈ 1014Hz. It is roughly 12% smaller than the usual value 1.75″. However, the experimental data in the past 100 years for the deflection of light by the sun in optical frequencies have uncertainties of (10-20)% due to large systematic errors. If one does not take the geometric-optics limit, one has the equation, GLµv[∂µΨ∂vΨcosΨ+ (∂µ∂vΨ)sinΨ] = 0, which suggests that the deflection angle could be frequency-dependent, according to Yang-Mills gravity. Nowadays, one has very accurate data in the radio frequencies ≈ 109Hz with uncertainties less than 0.1%. Thus, one can test this suggestion by using frequencies ≈ 1012 Hz, which could have a small uncertainty 0.1% due to the absence of systematic errors in the very long baseline interferometry.

  16. Cryosat-2 and Sentinel-3 tropospheric corrections: their evaluation over rivers and lakes

    NASA Astrophysics Data System (ADS)

    Fernandes, Joana; Lázaro, Clara; Vieira, Telmo; Restano, Marco; Ambrózio, Américo; Benveniste, Jérôme

    2017-04-01

    In the scope of the Sentinel-3 Hydrologic Altimetry PrototypE (SHAPE) project, errors that presently affect the tropospheric corrections i.e. dry and wet tropospheric corrections (DTC and WTC, respectively) given in satellite altimetry products are evaluated over inland water regions. These errors arise because both corrections, function of altitude, are usually computed with respect to an incorrect altitude reference. Several regions of interest (ROI) where CryoSat-2 (CS-2) is operating in SAR/SAR-In modes were selected for this evaluation. In this study, results for Danube River, Amazon Basin, Vanern and Titicaca lakes, and Caspian Sea, using Level 1B CS-2 data, are shown. DTC and WTC have been compared to those derived from ECMWF Operational model and computed at different altitude references: i) ECMWF orography; ii) ACE2 (Altimeter Corrected Elevations 2) and GWD-LR (Global Width Database for Large Rivers) global digital elevation models; iii) mean lake level, derived from Envisat mission data, or river profile derived in the scope of SHAPE project by AlongTrack (ATK) using Jason-2 data. Whenever GNSS data are available in the ROI, a GNSS-derived WTC was also generated and used for comparison. Overall, results show that the tropospheric corrections present in CS-2 L1B products are provided at the level of ECMWF orography, which can depart from the mean lake level or river profile by hundreds of metres. Therefore, the use of the model orography originates errors in the corrections. To mitigate these errors, both DTC and WTC should be provided at the mean river profile/lake level. For example, for the Caspian Sea with a mean level of -27 m, the tropospheric corrections provided in CS-2 products were computed at mean sea level (zero level), leading therefore to a systematic error in the corrections. In case a mean lake level is not available, it can be easily determined from satellite altimetry. In the absence of a mean river profile, both mentioned DEM, considered better altimetric surfaces when compared to the ECMWF orography, can be used. When using the model orography, systematic errors up to 3-5 cm are found in the DTC for most of the selected regions, which can induce significant errors in e.g. the determination of mean river profiles or lake level time series. For the Danube River, larger DTC errors up to 10 cm, due to terrain characteristics, can appear. For the WTC, with higher spatial variability, model errors of magnitude 1-3 cm are expected over inland waters. In the Danube region, the comparison of GNSS- and ECMWF-derived WTC has shown that the error in the WTC computed at orography level can be up to 3 cm. WTC errors with this magnitude have been found for all ROI. Although globally small, these errors are systematic and must be corrected prior to the generation of CS-2 Level 2 products. Once computed at the mean profile and mean lake level, the results show that tropospheric corrections have accuracy better than 1 cm. This analysis is currently being extended to S3 data and the first results are shown.

  17. Willingness to Share Research Data Is Related to the Strength of the Evidence and the Quality of Reporting of Statistical Results

    PubMed Central

    Wicherts, Jelte M.; Bakker, Marjan; Molenaar, Dylan

    2011-01-01

    Background The widespread reluctance to share published research data is often hypothesized to be due to the authors' fear that reanalysis may expose errors in their work or may produce conclusions that contradict their own. However, these hypotheses have not previously been studied systematically. Methods and Findings We related the reluctance to share research data for reanalysis to 1148 statistically significant results reported in 49 papers published in two major psychology journals. We found the reluctance to share data to be associated with weaker evidence (against the null hypothesis of no effect) and a higher prevalence of apparent errors in the reporting of statistical results. The unwillingness to share data was particularly clear when reporting errors had a bearing on statistical significance. Conclusions Our findings on the basis of psychological papers suggest that statistical results are particularly hard to verify when reanalysis is more likely to lead to contrasting conclusions. This highlights the importance of establishing mandatory data archiving policies. PMID:22073203

  18. APOLLO clock performance and normal point corrections

    NASA Astrophysics Data System (ADS)

    Liang, Y.; Murphy, T. W., Jr.; Colmenares, N. R.; Battat, J. B. R.

    2017-12-01

    The Apache point observatory lunar laser-ranging operation (APOLLO) has produced a large volume of high-quality lunar laser ranging (LLR) data since it began operating in 2006. For most of this period, APOLLO has relied on a GPS-disciplined, high-stability quartz oscillator as its frequency and time standard. The recent addition of a cesium clock as part of a timing calibration system initiated a comparison campaign between the two clocks. This has allowed correction of APOLLO range measurements—called normal points—during the overlap period, but also revealed a mechanism to correct for systematic range offsets due to clock errors in historical APOLLO data. Drift of the GPS clock on  ∼1000 s timescales contributed typically 2.5 mm of range error to APOLLO measurements, and we find that this may be reduced to  ∼1.6 mm on average. We present here a characterization of APOLLO clock errors, the method by which we correct historical data, and the resulting statistics.

  19. Sub-Camera Calibration of a Penta-Camera

    NASA Astrophysics Data System (ADS)

    Jacobsen, K.; Gerke, M.

    2016-03-01

    Penta cameras consisting of a nadir and four inclined cameras are becoming more and more popular, having the advantage of imaging also facades in built up areas from four directions. Such system cameras require a boresight calibration of the geometric relation of the cameras to each other, but also a calibration of the sub-cameras. Based on data sets of the ISPRS/EuroSDR benchmark for multi platform photogrammetry the inner orientation of the used IGI Penta DigiCAM has been analyzed. The required image coordinates of the blocks Dortmund and Zeche Zollern have been determined by Pix4Dmapper and have been independently adjusted and analyzed by program system BLUH. With 4.1 million image points in 314 images respectively 3.9 million image points in 248 images a dense matching was provided by Pix4Dmapper. With up to 19 respectively 29 images per object point the images are well connected, nevertheless the high number of images per object point are concentrated to the block centres while the inclined images outside the block centre are satisfying but not very strongly connected. This leads to very high values for the Student test (T-test) of the finally used additional parameters or in other words, additional parameters are highly significant. The estimated radial symmetric distortion of the nadir sub-camera corresponds to the laboratory calibration of IGI, but there are still radial symmetric distortions also for the inclined cameras with a size exceeding 5μm even if mentioned as negligible based on the laboratory calibration. Radial and tangential effects of the image corners are limited but still available. Remarkable angular affine systematic image errors can be seen especially in the block Zeche Zollern. Such deformations are unusual for digital matrix cameras, but it can be caused by the correlation between inner and exterior orientation if only parallel flight lines are used. With exception of the angular affinity the systematic image errors for corresponding cameras of both blocks have the same trend, but as usual for block adjustments with self calibration, they still show significant differences. Based on the very high number of image points the remaining image residuals can be safely determined by overlaying and averaging the image residuals corresponding to their image coordinates. The size of the systematic image errors, not covered by the used additional parameters, is in the range of a square mean of 0.1 pixels corresponding to 0.6μm. They are not the same for both blocks, but show some similarities for corresponding cameras. In general the bundle block adjustment with a satisfying set of additional parameters, checked by remaining systematic errors, is required for use of the whole geometric potential of the penta camera. Especially for object points on facades, often only in two images and taken with a limited base length, the correct handling of systematic image errors is important. At least in the analyzed data sets the self calibration of sub-cameras by bundle block adjustment suffers from the correlation of the inner to the exterior calibration due to missing crossing flight directions. As usual, the systematic image errors differ from block to block even without the influence of the correlation to the exterior orientation.

  20. Improving specialist drug prescribing in primary care using task and error analysis: an observational study.

    PubMed

    Chana, Narinder; Porat, Talya; Whittlesea, Cate; Delaney, Brendan

    2017-03-01

    Electronic prescribing has benefited from computerised clinical decision support systems (CDSSs); however, no published studies have evaluated the potential for a CDSS to support GPs in prescribing specialist drugs. To identify potential weaknesses and errors in the existing process of prescribing specialist drugs that could be addressed in the development of a CDSS. Semi-structured interviews with key informants followed by an observational study involving GPs in the UK. Twelve key informants were interviewed to investigate the use of CDSSs in the UK. Nine GPs were observed while performing case scenarios depicting requests from hospitals or patients to prescribe a specialist drug. Activity diagrams, hierarchical task analysis, and systematic human error reduction and prediction approach analyses were performed. The current process of prescribing specialist drugs by GPs is prone to error. Errors of omission due to lack of information were the most common errors, which could potentially result in a GP prescribing a specialist drug that should only be prescribed in hospitals, or prescribing a specialist drug without reference to a shared care protocol. Half of all possible errors in the prescribing process had a high probability of occurrence. A CDSS supporting GPs during the process of prescribing specialist drugs is needed. This could, first, support the decision making of whether or not to undertake prescribing, and, second, provide drug-specific parameters linked to shared care protocols, which could reduce the errors identified and increase patient safety. © British Journal of General Practice 2017.

  1. Semi-supervised anomaly detection - towards model-independent searches of new physics

    NASA Astrophysics Data System (ADS)

    Kuusela, Mikael; Vatanen, Tommi; Malmi, Eric; Raiko, Tapani; Aaltonen, Timo; Nagai, Yoshikazu

    2012-06-01

    Most classification algorithms used in high energy physics fall under the category of supervised machine learning. Such methods require a training set containing both signal and background events and are prone to classification errors should this training data be systematically inaccurate for example due to the assumed MC model. To complement such model-dependent searches, we propose an algorithm based on semi-supervised anomaly detection techniques, which does not require a MC training sample for the signal data. We first model the background using a multivariate Gaussian mixture model. We then search for deviations from this model by fitting to the observations a mixture of the background model and a number of additional Gaussians. This allows us to perform pattern recognition of any anomalous excess over the background. We show by a comparison to neural network classifiers that such an approach is a lot more robust against misspecification of the signal MC than supervised classification. In cases where there is an unexpected signal, a neural network might fail to correctly identify it, while anomaly detection does not suffer from such a limitation. On the other hand, when there are no systematic errors in the training data, both methods perform comparably.

  2. MAGNIFICENT MAGNIFICATION: EXPLOITING THE OTHER HALF OF THE LENSING SIGNAL

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Huff, Eric M.; Graves, Genevieve J.

    2014-01-10

    We describe a new method for measuring galaxy magnification due to weak gravitational lensing. Our method makes use of a tight scaling relation between galaxy properties that are modified by gravitational lensing, such as apparent size, and other properties that are not, such as surface brightness. In particular, we use a version of the well-known fundamental plane relation for early-type galaxies. This modified ''photometric fundamental plane'' uses only photometric galaxy properties, eliminating the need for spectroscopic data. We present the first detection of magnification using this method by applying it to photometric catalogs from the Sloan Digital Sky Survey. Thismore » analysis shows that the derived magnification signal is within a factor of three of that available from conventional methods using gravitational shear. We suppress the dominant sources of systematic error and discuss modest improvements that may further enhance the lensing signal-to-noise available with this method. Moreover, some of the dominant sources of systematic error are substantially different from those of shear-based techniques. With this new technique, magnification becomes a useful measurement tool for the coming era of large ground-based surveys intending to measure gravitational lensing.« less

  3. Adverse effects in dual-feed interferometry

    NASA Astrophysics Data System (ADS)

    Colavita, M. Mark

    2009-11-01

    Narrow-angle dual-star interferometric astrometry can provide very high accuracy in the presence of the Earth's turbulent atmosphere. However, to exploit the high atmospherically-limited accuracy requires control of systematic errors in measurement of the interferometer baseline, internal OPDs, and fringe phase. In addition, as high photometric SNR is required, care must be taken to maximize throughput and coherence to obtain high accuracy on faint stars. This article reviews the key aspects of the dual-star approach and implementation, the main contributors to the systematic error budget, and the coherence terms in the photometric error budget.

  4. Applicability of the single equivalent point dipole model to represent a spatially distributed bio-electrical source

    NASA Technical Reports Server (NTRS)

    Armoundas, A. A.; Feldman, A. B.; Sherman, D. A.; Cohen, R. J.

    2001-01-01

    Although the single equivalent point dipole model has been used to represent well-localised bio-electrical sources, in realistic situations the source is distributed. Consequently, position estimates of point dipoles determined by inverse algorithms suffer from systematic error due to the non-exact applicability of the inverse model. In realistic situations, this systematic error cannot be avoided, a limitation that is independent of the complexity of the torso model used. This study quantitatively investigates the intrinsic limitations in the assignment of a location to the equivalent dipole due to distributed electrical source. To simulate arrhythmic activity in the heart, a model of a wave of depolarisation spreading from a focal source over the surface of a spherical shell is used. The activity is represented by a sequence of concentric belt sources (obtained by slicing the shell with a sequence of parallel plane pairs), with constant dipole moment per unit length (circumferentially) directed parallel to the propagation direction. The distributed source is represented by N dipoles at equal arc lengths along the belt. The sum of the dipole potentials is calculated at predefined electrode locations. The inverse problem involves finding a single equivalent point dipole that best reproduces the electrode potentials due to the distributed source. The inverse problem is implemented by minimising the chi2 per degree of freedom. It is found that the trajectory traced by the equivalent dipole is sensitive to the location of the spherical shell relative to the fixed electrodes. It is shown that this trajectory does not coincide with the sequence of geometrical centres of the consecutive belt sources. For distributed sources within a bounded spherical medium, displaced from the sphere's centre by 40% of the sphere's radius, it is found that the error in the equivalent dipole location varies from 3 to 20% for sources with size between 5 and 50% of the sphere's radius. Finally, a method is devised to obtain the size of the distributed source during the cardiac cycle.

  5. Exploring Measurement Error with Cookies: A Real and Virtual Approach via Interactive Excel

    ERIC Educational Resources Information Center

    Sinex, Scott A; Gage, Barbara A.; Beck, Peggy J.

    2007-01-01

    A simple, guided-inquiry investigation using stacked sandwich cookies is employed to develop a simple linear mathematical model and to explore measurement error by incorporating errors as part of the investigation. Both random and systematic errors are presented. The model and errors are then investigated further by engaging with an interactive…

  6. Jason-2 systematic error analysis in the GPS derived orbits

    NASA Astrophysics Data System (ADS)

    Melachroinos, S.; Lemoine, F. G.; Zelensky, N. P.; Rowlands, D. D.; Luthcke, S. B.; Chinn, D. S.

    2011-12-01

    Several results related to global or regional sea level changes still too often rely on the assumption that orbit errors coming from station coordinates adoption can be neglected in the total error budget (Ceri et al. 2010). In particular Instantaneous crust-fixed coordinates are obtained by adding to the linear ITRF model the geophysical high-frequency variations. In principle, geocenter motion should also be included in this computation, in order to reference these coordinates to the center of mass of the whole Earth. This correction is currently not applied when computing GDR orbits. Cerri et al. (2010) performed an analysis of systematic errors common to all coordinates along the North/South direction, as this type of bias, also known as Z-shift, has a clear impact on MSL estimates due to the unequal distribution of continental surface in the northern and southern hemispheres. The goal of this paper is to specifically study the main source of errors which comes from the current imprecision in the Z-axis realization of the frame. We focus here on the time variability of this Z-shift, which we can decompose in a drift and a periodic component due to the presumably omitted geocenter motion. A series of Jason-2 GPS-only orbits have been computed at NASA GSFC, using both IGS05 and IGS08. These orbits have been shown to agree radially at less than 1 cm RMS vs our SLR/DORIS std0905 and std1007 reduced-dynamic orbits and in comparison with orbits produced by other analysis centers (Melachroinos et al. 2011). Our GPS-only JASON-2 orbit accuracy is assessed using a number of tests including analysis of independent SLR and altimeter crossover residuals, orbit overlap differences, and direct comparison to orbits generated at GSFC using SLR and DORIS tracking, and to orbits generated externally at other centers. Tests based on SLR-crossover residuals provide the best performance indicator for independent validation of the NASA/GSFC GPS-only reduced dynamic orbits. Reduced dynamic versus dynamic orbit differences are used to characterize the remaining force model error and TRF instability. At first, we quantify the effect of a North/South displacement of the tracking reference points for each of the three techniques. We then compare these results to the study of Morel and Willis (2005) and Ceri et al. (2010). We extend the analysis to the most recent Jason-2 cycles. We evaluate the GPS vs SLR & DORIS orbits produced using the GEODYN.

  7. Uncertainty Analysis of Seebeck Coefficient and Electrical Resistivity Characterization

    NASA Technical Reports Server (NTRS)

    Mackey, Jon; Sehirlioglu, Alp; Dynys, Fred

    2014-01-01

    In order to provide a complete description of a materials thermoelectric power factor, in addition to the measured nominal value, an uncertainty interval is required. The uncertainty may contain sources of measurement error including systematic bias error and precision error of a statistical nature. The work focuses specifically on the popular ZEM-3 (Ulvac Technologies) measurement system, but the methods apply to any measurement system. The analysis accounts for sources of systematic error including sample preparation tolerance, measurement probe placement, thermocouple cold-finger effect, and measurement parameters; in addition to including uncertainty of a statistical nature. Complete uncertainty analysis of a measurement system allows for more reliable comparison of measurement data between laboratories.

  8. Volcanic ash modeling with the NMMB-MONARCH-ASH model: quantification of offline modeling errors

    NASA Astrophysics Data System (ADS)

    Marti, Alejandro; Folch, Arnau

    2018-03-01

    Volcanic ash modeling systems are used to simulate the atmospheric dispersion of volcanic ash and to generate forecasts that quantify the impacts from volcanic eruptions on infrastructures, air quality, aviation, and climate. The efficiency of response and mitigation actions is directly associated with the accuracy of the volcanic ash cloud detection and modeling systems. Operational forecasts build on offline coupled modeling systems in which meteorological variables are updated at the specified coupling intervals. Despite the concerns from other communities regarding the accuracy of this strategy, the quantification of the systematic errors and shortcomings associated with the offline modeling systems has received no attention. This paper employs the NMMB-MONARCH-ASH model to quantify these errors by employing different quantitative and categorical evaluation scores. The skills of the offline coupling strategy are compared against those from an online forecast considered to be the best estimate of the true outcome. Case studies are considered for a synthetic eruption with constant eruption source parameters and for two historical events, which suitably illustrate the severe aviation disruptive effects of European (2010 Eyjafjallajökull) and South American (2011 Cordón Caulle) volcanic eruptions. Evaluation scores indicate that systematic errors due to the offline modeling are of the same order of magnitude as those associated with the source term uncertainties. In particular, traditional offline forecasts employed in operational model setups can result in significant uncertainties, failing to reproduce, in the worst cases, up to 45-70 % of the ash cloud of an online forecast. These inconsistencies are anticipated to be even more relevant in scenarios in which the meteorological conditions change rapidly in time. The outcome of this paper encourages operational groups responsible for real-time advisories for aviation to consider employing computationally efficient online dispersal models.

  9. Systematic Evaluation of Wajima Superposition (Steady-State Concentration to Mean Residence Time) in the Estimation of Human Intravenous Pharmacokinetic Profile.

    PubMed

    Lombardo, Franco; Berellini, Giuliano; Labonte, Laura R; Liang, Guiqing; Kim, Sean

    2016-03-01

    We present a systematic evaluation of the Wajima superpositioning method to estimate the human intravenous (i.v.) pharmacokinetic (PK) profile based on a set of 54 marketed drugs with diverse structure and range of physicochemical properties. We illustrate the use of average of "best methods" for the prediction of clearance (CL) and volume of distribution at steady state (VDss) as described in our earlier work (Lombardo F, Waters NJ, Argikar UA, et al. J Clin Pharmacol. 2013;53(2):178-191; Lombardo F, Waters NJ, Argikar UA, et al. J Clin Pharmacol. 2013;53(2):167-177). These methods provided much more accurate prediction of human PK parameters, yielding 88% and 70% of the prediction within 2-fold error for VDss and CL, respectively. The prediction of human i.v. profile using Wajima superpositioning of rat, dog, and monkey time-concentration profiles was tested against the observed human i.v. PK using fold error statistics. The results showed that 63% of the compounds yielded a geometric mean of fold error below 2-fold, and an additional 19% yielded a geometric mean of fold error between 2- and 3-fold, leaving only 18% of the compounds with a relatively poor prediction. Our results showed that good superposition was observed in any case, demonstrating the predictive value of the Wajima approach, and that the cause of poor prediction of human i.v. profile was mainly due to the poorly predicted CL value, while VDss prediction had a minor impact on the accuracy of human i.v. profile prediction. Copyright © 2016. Published by Elsevier Inc.

  10. Constraining the baryon-dark matter relative velocity with the large-scale 3-point correlation function of the SDSS BOSS DR12 CMASS galaxies

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Slepian, Zachary; Slosar, Anze; Eisenstein, Daniel J.

    We search for a galaxy clustering bias due to a modulation of galaxy number with the baryon-dark matter relative velocity resulting from recombination-era physics. We find no detected signal and place the constraint bv <0.01 on the relative velocity bias for the CMASS galaxies. This bias is an important potential systematic of Baryon Acoustic Oscillation (BAO) method measurements of the cosmic distance scale using the 2-point clustering. Our limit on the relative velocity bias indicates a systematic shift of no more than 0.3% rms in the distance scale inferred from the BAO feature in the BOSS 2-point clustering, well belowmore » the 1% statistical error of this measurement. In conclusion, this constraint is the most stringent currently available and has important implications for the ability of upcoming large-scale structure surveys such as DESI to self-protect against the relative velocity as a possible systematic.« less

  11. Constraining the baryon-dark matter relative velocity with the large-scale 3-point correlation function of the SDSS BOSS DR12 CMASS galaxies

    DOE PAGES

    Slepian, Zachary; Slosar, Anze; Eisenstein, Daniel J.; ...

    2017-10-24

    We search for a galaxy clustering bias due to a modulation of galaxy number with the baryon-dark matter relative velocity resulting from recombination-era physics. We find no detected signal and place the constraint bv <0.01 on the relative velocity bias for the CMASS galaxies. This bias is an important potential systematic of Baryon Acoustic Oscillation (BAO) method measurements of the cosmic distance scale using the 2-point clustering. Our limit on the relative velocity bias indicates a systematic shift of no more than 0.3% rms in the distance scale inferred from the BAO feature in the BOSS 2-point clustering, well belowmore » the 1% statistical error of this measurement. In conclusion, this constraint is the most stringent currently available and has important implications for the ability of upcoming large-scale structure surveys such as DESI to self-protect against the relative velocity as a possible systematic.« less

  12. Constraining the baryon-dark matter relative velocity with the large-scale three-point correlation function of the SDSS BOSS DR12 CMASS galaxies

    NASA Astrophysics Data System (ADS)

    Slepian, Zachary; Eisenstein, Daniel J.; Blazek, Jonathan A.; Brownstein, Joel R.; Chuang, Chia-Hsun; Gil-Marín, Héctor; Ho, Shirley; Kitaura, Francisco-Shu; McEwen, Joseph E.; Percival, Will J.; Ross, Ashley J.; Rossi, Graziano; Seo, Hee-Jong; Slosar, Anže; Vargas-Magaña, Mariana

    2018-02-01

    We search for a galaxy clustering bias due to a modulation of galaxy number with the baryon-dark matter relative velocity resulting from recombination-era physics. We find no detected signal and place the constraint bv < 0.01 on the relative velocity bias for the CMASS galaxies. This bias is an important potential systematic of baryon acoustic oscillation (BAO) method measurements of the cosmic distance scale using the two-point clustering. Our limit on the relative velocity bias indicates a systematic shift of no more than 0.3 per cent rms in the distance scale inferred from the BAO feature in the BOSS two-point clustering, well below the 1 per cent statistical error of this measurement. This constraint is the most stringent currently available and has important implications for the ability of upcoming large-scale structure surveys such as the Dark Energy Spectroscopic Instrument (DESI) to self-protect against the relative velocity as a possible systematic.

  13. Flow tilt angle measurements using lidar anemometry

    NASA Astrophysics Data System (ADS)

    Dellwik, Ebba; Mann, Jakob

    2010-05-01

    A new way of estimating near-surface mean flow tilt angles from ground based Doppler lidar measurements is presented. The results are compared with traditional mast based in-situ sonic anemometry. The tilt angle assessed with the lidar is based on 10 or 30 minute mean values of the velocity field from a conically scanning lidar. In this mode of measurement, the lidar beam is rotated in a circle by a prism with a fixed angle to the vertical at varying focus distances. By fitting a trigonometric function to the scans, the mean vertical velocity can be estimated. Lidar measurements from (1) a fetch-limited beech forest site taken at 48-175m above ground level, (2) a reference site in flat agricultural terrain and (3) a second reference site in very complex terrain are presented. The method to derive flow tilt angles and mean vertical velocities from lidar has several advantages compared to sonic anemometry; there is no flow distortion caused by the instrument itself, there are no temperature effects and the instrument misalignment can be corrected for by comparing tilt estimates at various heights. Contrary to mast-based instruments, the lidar measures the wind field with the exact same alignment error at a multitude of heights. Disadvantages with estimating vertical velocities from a lidar compared to mast-based measurements are slightly increased levels of statistical errors due to limited sampling time, because the sampling is disjunct and a requirement for homogeneous flow. The estimated mean vertical velocity is biased if the flow over the scanned circle is not homogeneous. However, the error on the mean vertical velocity due to flow inhomogeneity can be approximated by a function of the angle of the lidar beam to the vertical, the measurement height and the vertical gradient of the mean vertical velocity, whereas the error due to flow inhomogeneity on the horizontal mean wind speed is independent of the lidar beam angle. For the presented measurements over forest, it is evaluated that the systematic error due to the inhomogeneity of the flow is less than 0.2 degrees. Other possibilities for utilizing lidars for flow tilt angle and mean vertical velocities are discussed.

  14. Characterizing the impact of model error in hydrologic time series recovery inverse problems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hansen, Scott K.; He, Jiachuan; Vesselinov, Velimir V.

    Hydrologic models are commonly over-smoothed relative to reality, owing to computational limitations and to the difficulty of obtaining accurate high-resolution information. When used in an inversion context, such models may introduce systematic biases which cannot be encapsulated by an unbiased “observation noise” term of the type assumed by standard regularization theory and typical Bayesian formulations. Despite its importance, model error is difficult to encapsulate systematically and is often neglected. In this paper, model error is considered for an important class of inverse problems that includes interpretation of hydraulic transients and contaminant source history inference: reconstruction of a time series thatmore » has been convolved against a transfer function (i.e., impulse response) that is only approximately known. Using established harmonic theory along with two results established here regarding triangular Toeplitz matrices, upper and lower error bounds are derived for the effect of systematic model error on time series recovery for both well-determined and over-determined inverse problems. It is seen that use of additional measurement locations does not improve expected performance in the face of model error. A Monte Carlo study of a realistic hydraulic reconstruction problem is presented, and the lower error bound is seen informative about expected behavior. Finally, a possible diagnostic criterion for blind transfer function characterization is also uncovered.« less

  15. Characterizing the impact of model error in hydrologic time series recovery inverse problems

    DOE PAGES

    Hansen, Scott K.; He, Jiachuan; Vesselinov, Velimir V.

    2017-10-28

    Hydrologic models are commonly over-smoothed relative to reality, owing to computational limitations and to the difficulty of obtaining accurate high-resolution information. When used in an inversion context, such models may introduce systematic biases which cannot be encapsulated by an unbiased “observation noise” term of the type assumed by standard regularization theory and typical Bayesian formulations. Despite its importance, model error is difficult to encapsulate systematically and is often neglected. In this paper, model error is considered for an important class of inverse problems that includes interpretation of hydraulic transients and contaminant source history inference: reconstruction of a time series thatmore » has been convolved against a transfer function (i.e., impulse response) that is only approximately known. Using established harmonic theory along with two results established here regarding triangular Toeplitz matrices, upper and lower error bounds are derived for the effect of systematic model error on time series recovery for both well-determined and over-determined inverse problems. It is seen that use of additional measurement locations does not improve expected performance in the face of model error. A Monte Carlo study of a realistic hydraulic reconstruction problem is presented, and the lower error bound is seen informative about expected behavior. Finally, a possible diagnostic criterion for blind transfer function characterization is also uncovered.« less

  16. Systematic Biases in Parameter Estimation of Binary Black-Hole Mergers

    NASA Technical Reports Server (NTRS)

    Littenberg, Tyson B.; Baker, John G.; Buonanno, Alessandra; Kelly, Bernard J.

    2012-01-01

    Parameter estimation of binary-black-hole merger events in gravitational-wave data relies on matched filtering techniques, which, in turn, depend on accurate model waveforms. Here we characterize the systematic biases introduced in measuring astrophysical parameters of binary black holes by applying the currently most accurate effective-one-body templates to simulated data containing non-spinning numerical-relativity waveforms. For advanced ground-based detectors, we find that the systematic biases are well within the statistical error for realistic signal-to-noise ratios (SNR). These biases grow to be comparable to the statistical errors at high signal-to-noise ratios for ground-based instruments (SNR approximately 50) but never dominate the error budget. At the much larger signal-to-noise ratios expected for space-based detectors, these biases will become large compared to the statistical errors but are small enough (at most a few percent in the black-hole masses) that we expect they should not affect broad astrophysical conclusions that may be drawn from the data.

  17. Galaxy–galaxy lensing estimators and their covariance properties

    DOE PAGES

    Singh, Sukhdeep; Mandelbaum, Rachel; Seljak, Uros; ...

    2017-07-21

    Here, we study the covariance properties of real space correlation function estimators – primarily galaxy–shear correlations, or galaxy–galaxy lensing – using SDSS data for both shear catalogues and lenses (specifically the BOSS LOWZ sample). Using mock catalogues of lenses and sources, we disentangle the various contributions to the covariance matrix and compare them with a simple analytical model. We show that not subtracting the lensing measurement around random points from the measurement around the lens sample is equivalent to performing the measurement using the lens density field instead of the lens overdensity field. While the measurement using the lens densitymore » field is unbiased (in the absence of systematics), its error is significantly larger due to an additional term in the covariance. Therefore, this subtraction should be performed regardless of its beneficial effects on systematics. Comparing the error estimates from data and mocks for estimators that involve the overdensity, we find that the errors are dominated by the shape noise and lens clustering, which empirically estimated covariances (jackknife and standard deviation across mocks) that are consistent with theoretical estimates, and that both the connected parts of the four-point function and the supersample covariance can be neglected for the current levels of noise. While the trade-off between different terms in the covariance depends on the survey configuration (area, source number density), the diagnostics that we use in this work should be useful for future works to test their empirically determined covariances.« less

  18. Improved Analysis of GW150914 Using a Fully Spin-Precessing Waveform Model

    NASA Technical Reports Server (NTRS)

    Abbott, B. P.; Abbott, R.; Abbott, T. D.; Abernathy, M. R.; Acernese, F.; Ackley, K.; Adams, C.; Adams, T.; Addesso, P.; Camp, J. B.; hide

    2016-01-01

    This paper presents updated estimates of source parameters for GW150914, a binary black-hole coalescence event detected by the Laser Interferometer Gravitational-wave Observatory (LIGO) in 2015 [Abbott et al. Phys. Rev. Lett. 116, 061102 (2016).]. Abbott et al. [Phys. Rev. Lett. 116, 241102 (2016).] presented parameter estimation of the source using a 13-dimensional, phenomenological precessing-spin model (precessing IMRPhenom) and an 11-dimensional nonprecessing effective-one-body (EOB) model calibrated to numerical-relativity simulations, which forces spin alignment (nonprecessing EOBNR). Here, we present new results that include a 15-dimensional precessing-spin waveform model (precessing EOBNR) developed within the EOB formalism. We find good agreement with the parameters estimated previously [Abbott et al. Phys. Rev. Lett. 116, 241102 (2016).], and we quote updated component masses of 35(+5)(-3) solar M; and 30(+3)(-4) solar M; (where errors correspond to 90 symmetric credible intervals). We also present slightly tighter constraints on the dimensionless spin magnitudes of the two black holes, with a primary spin estimate is less than 0.65 and a secondary spin estimate is less than 0.75 at 90% probability. Abbott et al. [Phys. Rev. Lett. 116, 241102 (2016).] estimated the systematic parameter-extraction errors due to waveform-model uncertainty by combining the posterior probability densities of precessing IMRPhenom and nonprecessing EOBNR. Here, we find that the two precessing-spin models are in closer agreement, suggesting that these systematic errors are smaller than previously quoted.

  19. A theoretical perspective on the accuracy of rotational resonance (R 2)-based distance measurements in solid-state NMR

    NASA Astrophysics Data System (ADS)

    Pandey, Manoj Kumar; Ramachandran, Ramesh

    2010-03-01

    The application of solid-state NMR methodology for bio-molecular structure determination requires the measurement of constraints in the form of 13C-13C and 13C-15N distances, torsion angles and, in some cases, correlation of the anisotropic interactions. Since the availability of structurally important constraints in the solid state is limited due to lack of sufficient spectral resolution, the accuracy of the measured constraints become vital in studies relating the three-dimensional structure of proteins to its biological functions. Consequently, the theoretical methods employed to quantify the experimental data become important. To accentuate this aspect, we re-examine analytical two-spin models currently employed in the estimation of 13C-13C distances based on the rotational resonance (R 2) phenomenon. Although the error bars for the estimated distances tend to be in the range 0.5-1.0 Å, R 2 experiments are routinely employed in a variety of systems ranging from simple peptides to more complex amyloidogenic proteins. In this article we address this aspect by highlighting the systematic errors introduced by analytical models employing phenomenological damping terms to describe multi-spin effects. Specifically, the spin dynamics in R 2 experiments is described using Floquet theory employing two different operator formalisms. The systematic errors introduced by the phenomenological damping terms and their limitations are elucidated in two analytical models and analysed by comparing the results with rigorous numerical simulations.

  20. Galaxy–galaxy lensing estimators and their covariance properties

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Singh, Sukhdeep; Mandelbaum, Rachel; Seljak, Uros

    Here, we study the covariance properties of real space correlation function estimators – primarily galaxy–shear correlations, or galaxy–galaxy lensing – using SDSS data for both shear catalogues and lenses (specifically the BOSS LOWZ sample). Using mock catalogues of lenses and sources, we disentangle the various contributions to the covariance matrix and compare them with a simple analytical model. We show that not subtracting the lensing measurement around random points from the measurement around the lens sample is equivalent to performing the measurement using the lens density field instead of the lens overdensity field. While the measurement using the lens densitymore » field is unbiased (in the absence of systematics), its error is significantly larger due to an additional term in the covariance. Therefore, this subtraction should be performed regardless of its beneficial effects on systematics. Comparing the error estimates from data and mocks for estimators that involve the overdensity, we find that the errors are dominated by the shape noise and lens clustering, which empirically estimated covariances (jackknife and standard deviation across mocks) that are consistent with theoretical estimates, and that both the connected parts of the four-point function and the supersample covariance can be neglected for the current levels of noise. While the trade-off between different terms in the covariance depends on the survey configuration (area, source number density), the diagnostics that we use in this work should be useful for future works to test their empirically determined covariances.« less

  1. Galaxy-galaxy lensing estimators and their covariance properties

    NASA Astrophysics Data System (ADS)

    Singh, Sukhdeep; Mandelbaum, Rachel; Seljak, Uroš; Slosar, Anže; Vazquez Gonzalez, Jose

    2017-11-01

    We study the covariance properties of real space correlation function estimators - primarily galaxy-shear correlations, or galaxy-galaxy lensing - using SDSS data for both shear catalogues and lenses (specifically the BOSS LOWZ sample). Using mock catalogues of lenses and sources, we disentangle the various contributions to the covariance matrix and compare them with a simple analytical model. We show that not subtracting the lensing measurement around random points from the measurement around the lens sample is equivalent to performing the measurement using the lens density field instead of the lens overdensity field. While the measurement using the lens density field is unbiased (in the absence of systematics), its error is significantly larger due to an additional term in the covariance. Therefore, this subtraction should be performed regardless of its beneficial effects on systematics. Comparing the error estimates from data and mocks for estimators that involve the overdensity, we find that the errors are dominated by the shape noise and lens clustering, which empirically estimated covariances (jackknife and standard deviation across mocks) that are consistent with theoretical estimates, and that both the connected parts of the four-point function and the supersample covariance can be neglected for the current levels of noise. While the trade-off between different terms in the covariance depends on the survey configuration (area, source number density), the diagnostics that we use in this work should be useful for future works to test their empirically determined covariances.

  2. Chaos in Atomic Force Microscopy

    NASA Astrophysics Data System (ADS)

    Hu, Shuiqing; Raman, Arvind

    2006-01-01

    Chaotic oscillations of microcantilever tips in dynamic atomic force microscopy (AFM) are reported and characterized. Systematic experiments performed using a variety of microcantilevers under a wide range of operating conditions indicate that softer AFM microcantilevers bifurcate from periodic to chaotic oscillations near the transition from the noncontact to the tapping regimes. Careful Lyapunov exponent and noise titration calculations of the tip oscillation data confirm their chaotic nature. AFM images taken by scanning the chaotically oscillating tips over the sample show small, but significant metrology errors at the nanoscale due to this “deterministic” uncertainty.

  3. Utilizing the N beam position monitor method for turn-by-turn optics measurements

    NASA Astrophysics Data System (ADS)

    Langner, A.; Benedetti, G.; Carlà, M.; Iriso, U.; Martí, Z.; de Portugal, J. Coello; Tomás, R.

    2016-09-01

    The N beam position monitor method (N -BPM) which was recently developed for the LHC has significantly improved the precision of optics measurements that are based on BPM turn-by-turn data. The main improvement is due to the consideration of correlations for statistical and systematic error sources, as well as increasing the amount of BPM combinations which are used to derive the β -function at one location. We present how this technique can be applied at light sources like ALBA, and compare the results with other methods.

  4. Stability of colloidal gold and determination of the Hamaker constant

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Demirci, S.; Enuestuen, B.V.; Turkevich, J.

    1978-12-14

    Previous computation of stability factors of colloidal gold from coagulation data was found to be in systematic error due to an underestimation of the particle concentration by electron microscopy. A new experimental technique was developed for determination of this concentration. Stability factors were recalculated from the previous data using the correct concentration. While most of the previously reported conclusions remain unchanged, the absolute rate of fast coagulation is found to agree with that predicted by the theory. A value of the Hamaker constant was determined from the corrected data.

  5. Systematic review of the magnitude of change in prevalence and quantity of Salmonella after administration of pathogen reduction treatments on pork carcasses.

    PubMed

    Totton, Sarah C; Glanville, Julie M; Dzikamunhenga, Rungano S; Dickson, James S; O'Connor, Annette M

    2016-06-01

    In this systematic review, we summarized change in Salmonella prevalence and/or quantity associated with pathogen reduction treatments (washes, sprays, steam) on pork carcasses or skin-on carcass parts in comparative designs (natural or artificial contamination). In January 2015, CAB Abstracts (1910-2015), SCI and CPCI-Science (1900-2015), Medline® and Medline® In-Process (1946-2015) (OVIDSP), Science.gov, and Safe Pork (1996-2012) were searched with no language or publication type restrictions. Reference lists of 24 review articles were checked. Two independent reviewers screened 4001 titles/abstracts and assessed 122 full-text articles for eligibility. Only English-language records were extracted. Fourteen studies (5 in commercial abattoirs) were extracted and risk of bias was assessed by two reviewers independently. Risk of bias due to systematic error was moderate; a major source of bias was the potential differential recovery of Salmonella from treated carcasses due to knowledge of the intervention. The most consistently observed association was a positive effect of acid washes on categorical measures of Salmonella; however, this was based on individual results, not a summary effect measure. There was no strong evidence that any one intervention protocol (acid temperature, acid concentration, water temperature) was clearly superior to others for Salmonella control.

  6. Error Analysis of Indirect Broadband Monitoring of Multilayer Optical Coatings using Computer Simulations

    NASA Astrophysics Data System (ADS)

    Semenov, Z. V.; Labusov, V. A.

    2017-11-01

    Results of studying the errors of indirect monitoring by means of computer simulations are reported. The monitoring method is based on measuring spectra of reflection from additional monitoring substrates in a wide spectral range. Special software (Deposition Control Simulator) is developed, which allows one to estimate the influence of the monitoring system parameters (noise of the photodetector array, operating spectral range of the spectrometer and errors of its calibration in terms of wavelengths, drift of the radiation source intensity, and errors in the refractive index of deposited materials) on the random and systematic errors of deposited layer thickness measurements. The direct and inverse problems of multilayer coatings are solved using the OptiReOpt library. Curves of the random and systematic errors of measurements of the deposited layer thickness as functions of the layer thickness are presented for various values of the system parameters. Recommendations are given on using the indirect monitoring method for the purpose of reducing the layer thickness measurement error.

  7. Evaluation of monthly rainfall estimates derived from the special sensor microwave/imager (SSM/I) over the tropical Pacific

    NASA Technical Reports Server (NTRS)

    Berg, Wesley; Avery, Susan K.

    1995-01-01

    Estimates of monthly rainfall have been computed over the tropical Pacific using passive microwave satellite observations from the special sensor microwave/imager (SSM/I) for the period from July 1987 through December 1990. These monthly estimates are calibrated using data from a network of Pacific atoll rain gauges in order to account for systematic biases and are then compared with several visible and infrared satellite-based rainfall estimation techniques for the purpose of evaluating the performance of the microwave-based estimates. Although several key differences among the various techniques are observed, the general features of the monthly rainfall time series agree very well. Finally, the significant error sources contributing to uncertainties in the monthly estimates are examined and an estimate of the total error is produced. The sampling error characteristics are investigated using data from two SSM/I sensors and a detailed analysis of the characteristics of the diurnal cycle of rainfall over the oceans and its contribution to sampling errors in the monthly SSM/I estimates is made using geosynchronous satellite data. Based on the analysis of the sampling and other error sources the total error was estimated to be of the order of 30 to 50% of the monthly rainfall for estimates averaged over 2.5 deg x 2.5 deg latitude/longitude boxes, with a contribution due to diurnal variability of the order of 10%.

  8. The effects of recall errors and of selection bias in epidemiologic studies of mobile phone use and cancer risk.

    PubMed

    Vrijheid, Martine; Deltour, Isabelle; Krewski, Daniel; Sanchez, Marie; Cardis, Elisabeth

    2006-07-01

    This paper examines the effects of systematic and random errors in recall and of selection bias in case-control studies of mobile phone use and cancer. These sensitivity analyses are based on Monte-Carlo computer simulations and were carried out within the INTERPHONE Study, an international collaborative case-control study in 13 countries. Recall error scenarios simulated plausible values of random and systematic, non-differential and differential recall errors in amount of mobile phone use reported by study subjects. Plausible values for the recall error were obtained from validation studies. Selection bias scenarios assumed varying selection probabilities for cases and controls, mobile phone users, and non-users. Where possible these selection probabilities were based on existing information from non-respondents in INTERPHONE. Simulations used exposure distributions based on existing INTERPHONE data and assumed varying levels of the true risk of brain cancer related to mobile phone use. Results suggest that random recall errors of plausible levels can lead to a large underestimation in the risk of brain cancer associated with mobile phone use. Random errors were found to have larger impact than plausible systematic errors. Differential errors in recall had very little additional impact in the presence of large random errors. Selection bias resulting from underselection of unexposed controls led to J-shaped exposure-response patterns, with risk apparently decreasing at low to moderate exposure levels. The present results, in conjunction with those of the validation studies conducted within the INTERPHONE study, will play an important role in the interpretation of existing and future case-control studies of mobile phone use and cancer risk, including the INTERPHONE study.

  9. Analyzing False Positives of Four Questions in the Force Concept Inventory

    ERIC Educational Resources Information Center

    Yasuda, Jun-ichro; Mae, Naohiro; Hull, Michael M.; Taniguchi, Masa-aki

    2018-01-01

    In this study, we analyze the systematic error from false positives of the Force Concept Inventory (FCI). We compare the systematic errors of question 6 (Q.6), Q.7, and Q.16, for which clearly erroneous reasoning has been found, with Q.5, for which clearly erroneous reasoning has not been found. We determine whether or not a correct response to a…

  10. Direct Evaluation of the Quark Content of Nucleons from Lattice QCD at the Physical Point.

    PubMed

    Abdel-Rehim, A; Alexandrou, C; Constantinou, M; Hadjiyiannakou, K; Jansen, K; Kallidonis, Ch; Koutsou, G; Avilés-Casco, A Vaquero

    2016-06-24

    We evaluate the light, strange, and charm scalar content of the nucleon using one lattice QCD ensemble generated with two degenerate light quarks with mass fixed to their physical value. We use improved techniques to evaluate the disconnected quark loops to sufficient accuracy to determine the strange and charm nucleon σ terms in addition to the light quark content σ_{πN}. We find σ_{πN}=37.2(2.6)(4.7/2.9)  MeV, σ_{s}=41.1(8.2)(7.8/5.8)  MeV, and σ_{c}=79(21)(12/8)  MeV, where the first error is statistical and the second is the systematic error due to the determination of the lattice spacing, the assessment of finite volume, and residual excited state effects.

  11. A test of general relativity using the LARES and LAGEOS satellites and a GRACE Earth gravity model: Measurement of Earth's dragging of inertial frames.

    PubMed

    Ciufolini, Ignazio; Paolozzi, Antonio; Pavlis, Erricos C; Koenig, Rolf; Ries, John; Gurzadyan, Vahe; Matzner, Richard; Penrose, Roger; Sindoni, Giampiero; Paris, Claudio; Khachatryan, Harutyun; Mirzoyan, Sergey

    2016-01-01

    We present a test of general relativity, the measurement of the Earth's dragging of inertial frames. Our result is obtained using about 3.5 years of laser-ranged observations of the LARES, LAGEOS, and LAGEOS 2 laser-ranged satellites together with the Earth gravity field model GGM05S produced by the space geodesy mission GRACE. We measure [Formula: see text], where [Formula: see text] is the Earth's dragging of inertial frames normalized to its general relativity value, 0.002 is the 1-sigma formal error and 0.05 is our preliminary estimate of systematic error mainly due to the uncertainties in the Earth gravity model GGM05S. Our result is in agreement with the prediction of general relativity.

  12. Insensitivity of The Distance Ladder Hubble Constant Determination to Cepheid Calibration Modeling Choices

    NASA Astrophysics Data System (ADS)

    Follin, B.; Knox, L.

    2018-03-01

    Recent determination of the Hubble constant via Cepheid-calibrated supernovae by Riess et al. (2016) (R16) find ˜3σ tension with inferences based on cosmic microwave background temperature and polarization measurements from Planck. This tension could be an indication of inadequacies in the concordance ΛCDM model. Here we investigate the possibility that the discrepancy could instead be due to systematic bias or uncertainty in the Cepheid calibration step of the distance ladder measurement by R16. We consider variations in total-to-selective extinction of Cepheid flux as a function of line-of-sight, hidden structure in the period-luminosity relationship, and potentially different intrinsic colour distributions of Cepheids as a function of host galaxy. Considering all potential sources of error, our final determination of H0 = 73.3 ± 1.7 km/s/Mpc (not including systematic errors from the treatment of geometric distances or Type Ia Supernovae) shows remarkable robustness and agreement with R16. We conclude systematics from the modelling of Cepheid photometry, including Cepheid selection criteria, cannot explain the observed tension between Cepheid-variable and CMB-based inferences of the Hubble constant. Considering a `model-independent' approach to relating Cepheids in galaxies with known distances to Cepheids in galaxies hosting a Type Ia supernova and finding agreement with the R16 result, we conclude no generalization of the model relating anchor and host Cepheid magnitude measurements can introduce significant bias in the H0 inference.

  13. Insensitivity of the distance ladder Hubble constant determination to Cepheid calibration modelling choices

    NASA Astrophysics Data System (ADS)

    Follin, B.; Knox, L.

    2018-07-01

    Recent determination of the Hubble constant via Cepheid-calibrated supernovae by Riess et al.find ˜3σ tension with inferences based on cosmic microwave background (CMB) temperature and polarization measurements from Planck. This tension could be an indication of inadequacies in the concordance Λcold dark matter model. Here, we investigate the possibility that the discrepancy could instead be due to systematic bias or uncertainty in the Cepheid calibration step of the distance ladder measurement by Riess et al. We consider variations in total-to-selective extinction of Cepheid flux as a function of line of sight, hidden structure in the period-luminosity relationship, and potentially different intrinsic colour distributions of Cepheids as a function of host galaxy. Considering all potential sources of error, our final determination of H0 = 73.3 ± 1.7 km s-1Mpc-1 (not including systematic errors from the treatment of geometric distances or Type Ia supernovae) shows remarkable robustness and agreement with Riess et al. We conclude systematics from the modelling of Cepheid photometry, including Cepheid selection criteria, cannot explain the observed tension between Cepheid-variable and CMB-based inferences of the Hubble constant. Considering a `model-independent' approach to relating Cepheids in galaxies with known distances to Cepheids in galaxies hosting a Type Ia supernova and finding agreement with the Riess et al. result, we conclude no generalization of the model relating anchor and host Cepheid magnitude measurements can introduce significant bias in the H0 inference.

  14. Testing Scientific Software: A Systematic Literature Review

    PubMed Central

    Kanewala, Upulee; Bieman, James M.

    2014-01-01

    Context Scientific software plays an important role in critical decision making, for example making weather predictions based on climate models, and computation of evidence for research publications. Recently, scientists have had to retract publications due to errors caused by software faults. Systematic testing can identify such faults in code. Objective This study aims to identify specific challenges, proposed solutions, and unsolved problems faced when testing scientific software. Method We conducted a systematic literature survey to identify and analyze relevant literature. We identified 62 studies that provided relevant information about testing scientific software. Results We found that challenges faced when testing scientific software fall into two main categories: (1) testing challenges that occur due to characteristics of scientific software such as oracle problems and (2) testing challenges that occur due to cultural differences between scientists and the software engineering community such as viewing the code and the model that it implements as inseparable entities. In addition, we identified methods to potentially overcome these challenges and their limitations. Finally we describe unsolved challenges and how software engineering researchers and practitioners can help to overcome them. Conclusions Scientific software presents special challenges for testing. Specifically, cultural differences between scientist developers and software engineers, along with the characteristics of the scientific software make testing more difficult. Existing techniques such as code clone detection can help to improve the testing process. Software engineers should consider special challenges posed by scientific software such as oracle problems when developing testing techniques. PMID:25125798

  15. Detector system dose verification comparisons for arc therapy: couch vs. gantry mount

    PubMed Central

    Manikandan, Arjunan; Nandy, Maitreyee; Sureka, Chandra Sekaran; Gossman, Michael S.; Sujatha, Nadendla; Rajendran, Vivek Thirupathur

    2014-01-01

    The aim of this study was to assess the performance of a gantry‐mounted detector system and a couch set detector system using a systematic multileaf collimator positional error manually introduced for volumetric‐modulated arc therapy. Four head and neck and esophagus VMAT plans were evaluated by measurement using an electronic portal imaging device and an ion chamber array. Each plan was copied and duplicated with a 1 mm systematic MLC positional error in the left leaf bank. Direct comparison of measurements for plans with and without the error permitted observational characteristics for quality assurance performance between detectors. A total of 48 different plans were evaluated for this testing. The mean percentage planar dose differences required to satisfy a 95% match between plans with and without the MLCPE were 5.2% ± 0.5% for the chamber array with gantry motion, 8.12% ± 1.04% for the chamber array with a static gantry at 0°, and 10.9% ± 1.4% for the EPID with gantry motion. It was observed that the EPID was less accurate due to overresponse of the MLCPE in the left leaf bank. The EPID always images bank‐A on the ipsilateral side of the detector, whereas for a chamber array or for a patient, that bank changes as it crosses the ‐90° or +90° position. A couch set detector system can reproduce the TPS calculated values most consistently. We recommend it as the most reliable patient specific QA system for MLC position error testing. This research is highlighted by the finding of up to 12.7% dose variation for H/N and esophagus cases for VMAT delivery, where the mere source of error was the stated clinically acceptability of 1 mm MLC position deviation of TG‐142. PACS numbers: 87.56.‐v, 87.55.‐x, 07.57.KP, 29.40.‐n, 85.25.Pb PMID:24892330

  16. Error Sources in Asteroid Astrometry

    NASA Technical Reports Server (NTRS)

    Owen, William M., Jr.

    2000-01-01

    Asteroid astrometry, like any other scientific measurement process, is subject to both random and systematic errors, not all of which are under the observer's control. To design an astrometric observing program or to improve an existing one requires knowledge of the various sources of error, how different errors affect one's results, and how various errors may be minimized by careful observation or data reduction techniques.

  17. Comparison of the Lund and Browder table to computed tomography scan three-dimensional surface area measurement for a pediatric cohort.

    PubMed

    Rumpf, R Wolfgang; Stewart, William C L; Martinez, Stephen K; Gerrard, Chandra Y; Adolphi, Natalie L; Thakkar, Rajan; Coleman, Alan; Rajab, Adrian; Ray, William C; Fabia, Renata

    2018-01-01

    Treating burns effectively requires accurately assessing the percentage of the total body surface area (%TBSA) affected by burns. Current methods for estimating %TBSA, such as Lund and Browder (L&B) tables, rely on historic body statistics. An increasingly obese population has been blamed for increasing errors in %TBSA estimates. However, this assumption has not been experimentally validated. We hypothesized that errors in %TBSA estimates using L&B were due to differences in the physical proportions of today's children compared with children in the early 1940s when the chart was developed and that these differences would appear as body mass index (BMI)-associated systematic errors in the L&B values versus actual body surface areas. We measured the TBSA of human pediatric cadavers using computed tomography scans. Subjects ranged from 9 mo to 15 y in age. We chose outliers of the BMI distribution (from the 31st percentile at the low through the 99th percentile at the high). We examined surface area proportions corresponding to L&B regions. Measured regional proportions based on computed tomography scans were in reasonable agreement with L&B, even with subjects in the tails of the BMI range. The largest deviation was 3.4%, significantly less than the error seen in real-world %TBSA estimates. While today's population is more obese than those studied by L&B, their body region proportions scale surprisingly well. The primary error in %TBSA estimation is not due to changing physical proportions of today's children and may instead lie in the application of the L&B table. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  18. A systematic review of patient medication error on self-administering medication at home.

    PubMed

    Mira, José Joaquín; Lorenzo, Susana; Guilabert, Mercedes; Navarro, Isabel; Pérez-Jover, Virtudes

    2015-06-01

    Medication errors have been analyzed as a health professionals' responsibility (due to mistakes in prescription, preparation or dispensing). However, sometimes, patients themselves (or their caregivers) make mistakes in the administration of the medication. The epidemiology of patient medication errors (PEs) has been scarcely reviewed in spite of its impact on people, on therapeutic effectiveness and on incremental cost for the health systems. This study reviews and describes the methodological approaches and results of published studies on the frequency, causes and consequences of medication errors committed by patients at home. A review of research articles published between 1990 and 2014 was carried out using MEDLINE, Web-of-Knowledge, Scopus, Tripdatabase and Index Medicus. The frequency of PE was situated between 19 and 59%. The elderly and the preschooler population constituted a higher number of mistakes than others. The most common were: incorrect dosage, forgetting, mixing up medications, failing to recall indications and taking out-of-date or inappropriately stored drugs. The majority of these mistakes have no negative consequences. Health literacy, information and communication and complexity of use of dispensing devices were identified as causes of PEs. Apps and other new technologies offer several opportunities for improving drug safety.

  19. Spectral purity study for IPDA lidar measurement of CO2

    NASA Astrophysics Data System (ADS)

    Ma, Hui; Liu, Dong; Xie, Chen-Bo; Tan, Min; Deng, Qian; Xu, Ji-Wei; Tian, Xiao-Min; Wang, Zhen-Zhu; Wang, Bang-Xin; Wang, Ying-Jian

    2018-02-01

    A high sensitivity and global covered observation of carbon dioxide (CO2) is expected by space-borne integrated path differential absorption (IPDA) lidar which has been designed as the next generation measurement. The stringent precision of space-borne CO2 data, for example 1ppm or better, is required to address the largest number of carbon cycle science questions. Spectral purity, which is defined as the ratio of effective absorbed energy to the total energy transmitted, is one of the most important system parameters of IPDA lidar which directly influences the precision of CO2. Due to the column averaged dry air mixing ratio of CO2 is inferred from comparison of the two echo pulse signals, the laser output usually accompanied by an unexpected spectrally broadband background radiation would posing significant systematic error. In this study, the spectral energy density line shape and spectral impurity line shape are modeled as Lorentz line shape for the simulation, and the latter is assumed as an unabsorbed component by CO2. An error equation is deduced according to IPDA detecting theory for calculating the system error caused by spectral impurity. For a spectral purity of 99%, the induced error could reach up to 8.97 ppm.

  20. The Accuracy of GBM GRB Localizations

    NASA Astrophysics Data System (ADS)

    Briggs, Michael Stephen; Connaughton, V.; Meegan, C.; Hurley, K.

    2010-03-01

    We report an study of the accuracy of GBM GRB localizations, analyzing three types of localizations: those produced automatically by the GBM Flight Software on board GBM, those produced automatically with ground software in near real time, and localizations produced with human guidance. The two types of automatic locations are distributed in near real-time via GCN Notices; the human-guided locations are distributed on timescale of many minutes or hours using GCN Circulars. This work uses a Bayesian analysis that models the distribution of the GBM total location error by comparing GBM locations to more accurate locations obtained with other instruments. Reference locations are obtained from Swift, Super-AGILE, the LAT, and with the IPN. We model the GBM total location errors as having systematic errors in addition to the statistical errors and use the Bayesian analysis to constrain the systematic errors.

  1. Frequency of data extraction errors and methods to increase data extraction quality: a methodological review.

    PubMed

    Mathes, Tim; Klaßen, Pauline; Pieper, Dawid

    2017-11-28

    Our objective was to assess the frequency of data extraction errors and its potential impact on results in systematic reviews. Furthermore, we evaluated the effect of different extraction methods, reviewer characteristics and reviewer training on error rates and results. We performed a systematic review of methodological literature in PubMed, Cochrane methodological registry, and by manual searches (12/2016). Studies were selected by two reviewers independently. Data were extracted in standardized tables by one reviewer and verified by a second. The analysis included six studies; four studies on extraction error frequency, one study comparing different reviewer extraction methods and two studies comparing different reviewer characteristics. We did not find a study on reviewer training. There was a high rate of extraction errors (up to 50%). Errors often had an influence on effect estimates. Different data extraction methods and reviewer characteristics had moderate effect on extraction error rates and effect estimates. The evidence base for established standards of data extraction seems weak despite the high prevalence of extraction errors. More comparative studies are needed to get deeper insights into the influence of different extraction methods.

  2. Systematic reviews, systematic error and the acquisition of clinical knowledge

    PubMed Central

    2010-01-01

    Background Since its inception, evidence-based medicine and its application through systematic reviews, has been widely accepted. However, it has also been strongly criticised and resisted by some academic groups and clinicians. One of the main criticisms of evidence-based medicine is that it appears to claim to have unique access to absolute scientific truth and thus devalues and replaces other types of knowledge sources. Discussion The various types of clinical knowledge sources are categorised on the basis of Kant's categories of knowledge acquisition, as being either 'analytic' or 'synthetic'. It is shown that these categories do not act in opposition but rather, depend upon each other. The unity of analysis and synthesis in knowledge acquisition is demonstrated during the process of systematic reviewing of clinical trials. Systematic reviews constitute comprehensive synthesis of clinical knowledge but depend upon plausible, analytical hypothesis development for the trials reviewed. The dangers of systematic error regarding the internal validity of acquired knowledge are highlighted on the basis of empirical evidence. It has been shown that the systematic review process reduces systematic error, thus ensuring high internal validity. It is argued that this process does not exclude other types of knowledge sources. Instead, amongst these other types it functions as an integrated element during the acquisition of clinical knowledge. Conclusions The acquisition of clinical knowledge is based on interaction between analysis and synthesis. Systematic reviews provide the highest form of synthetic knowledge acquisition in terms of achieving internal validity of results. In that capacity it informs the analytic knowledge of the clinician but does not replace it. PMID:20537172

  3. Methods, analysis, and the treatment of systematic errors for the electron electric dipole moment search in thorium monoxide

    NASA Astrophysics Data System (ADS)

    Baron, J.; Campbell, W. C.; DeMille, D.; Doyle, J. M.; Gabrielse, G.; Gurevich, Y. V.; Hess, P. W.; Hutzler, N. R.; Kirilov, E.; Kozyryev, I.; O'Leary, B. R.; Panda, C. D.; Parsons, M. F.; Spaun, B.; Vutha, A. C.; West, A. D.; West, E. P.; ACME Collaboration

    2017-07-01

    We recently set a new limit on the electric dipole moment of the electron (eEDM) (J Baron et al and ACME collaboration 2014 Science 343 269-272), which represented an order-of-magnitude improvement on the previous limit and placed more stringent constraints on many charge-parity-violating extensions to the standard model. In this paper we discuss the measurement in detail. The experimental method and associated apparatus are described, together with the techniques used to isolate the eEDM signal. In particular, we detail the way experimental switches were used to suppress effects that can mimic the signal of interest. The methods used to search for systematic errors, and models explaining observed systematic errors, are also described. We briefly discuss possible improvements to the experiment.

  4. Phase-demodulation error of a fiber-optic Fabry-Perot sensor with complex reflection coefficients.

    PubMed

    Kilpatrick, J M; MacPherson, W N; Barton, J S; Jones, J D

    2000-03-20

    The influence of reflector losses attracts little discussion in standard treatments of the Fabry-Perot interferometer yet may be an important factor contributing to errors in phase-stepped demodulation of fiber optic Fabry-Perot (FFP) sensors. We describe a general transfer function for FFP sensors with complex reflection coefficients and estimate systematic phase errors that arise when the asymmetry of the reflected fringe system is neglected, as is common in the literature. The measured asymmetric response of higher-finesse metal-dielectric FFP constructions corroborates a model that predicts systematic phase errors of 0.06 rad in three-step demodulation of a low-finesse FFP sensor (R = 0.05) with internal reflector losses of 25%.

  5. Nature versus nurture: A systematic approach to elucidate gene-environment interactions in the development of myopic refractive errors.

    PubMed

    Miraldi Utz, Virginia

    2017-01-01

    Myopia is the most common eye disorder and major cause of visual impairment worldwide. As the incidence of myopia continues to rise, the need to further understand the complex roles of molecular and environmental factors controlling variation in refractive error is of increasing importance. Tkatchenko and colleagues applied a systematic approach using a combination of gene set enrichment analysis, genome-wide association studies, and functional analysis of a murine model to identify a myopia susceptibility gene, APLP2. Differential expression of refractive error was associated with time spent reading for those with low frequency variants in this gene. This provides support for the longstanding hypothesis of gene-environment interactions in refractive error development.

  6. A novel method of measuring the concentration of anaesthetic vapours using a dew-point hygrometer.

    PubMed

    Wilkes, A R; Mapleson, W W; Mecklenburgh, J S

    1994-02-01

    The Antoine equation relates the saturated vapour pressure of a volatile substance, such as an anaesthetic agent, to the temperature. The measurement of the 'dew-point' of a dry gas mixture containing a volatile anaesthetic agent by a dew-point hygrometer permits the determination of the partial pressure of the anaesthetic agent. The accuracy of this technique is limited only by the accuracy of the Antoine coefficients and of the temperature measurement. Comparing measurements by the dew-point method with measurements by refractometry showed systematic discrepancies up to 0.2% and random discrepancies with SDS up to 0.07% concentration in the 1% to 5% range for three volatile anaesthetics. The systematic discrepancies may be due to errors in available data for the vapour pressures and/or the refractive indices of the anaesthetics.

  7. Systematic errors in regional climate model RegCM over Europe and sensitivity to variations in PBL parameterizations

    NASA Astrophysics Data System (ADS)

    Güttler, I.

    2012-04-01

    Systematic errors in near-surface temperature (T2m), total cloud cover (CLD), shortwave albedo (ALB) and surface net longwave (SNL) and shortwave energy flux (SNS) are detected in simulations of RegCM on 50 km resolution over the European CORDEX domain when forced with ERA-Interim reanalysis. Simulated T2m is compared to CRU 3.0 and other variables to GEWEX-SRB 3.0 dataset. Most of systematic errors found in SNL and SNS are consistent with errors in T2m, CLD and ALB: they include prevailing negative errors in T2m and positive errors in CLD present during most of the year. Errors in T2m and CLD can be associated with the overestimation of SNL and SNS in most simulations. Impact of errors in albedo are primarily confined to north Africa, where e.g. underestimation of albedo in JJA is consistent with associated surface heating and positive SNS and T2m errors. Sensitivity to the choice of the PBL scheme and various parameters in PBL schemes is examined from an ensemble of 20 simulations. The recently implemented prognostic PBL scheme performs over Europe with a mixed success when compared to standard diagnostic scheme with a general increase of errors in T2m and CLD over all of the domain. Nevertheless, the improvements in T2m can be found in e.g. north-eastern Europe during DJF and western Europe during JJA where substantial warm biases existed in simulations with the diagnostic scheme. The most detectable impact, in terms of the JJA T2m errors over western Europe, comes form the variation in the formulation of mixing length. In order to reduce the above errors an update of the RegCM albedo values and further work in customizing PBL scheme is suggested.

  8. Interventions to reduce medication errors in neonatal care: a systematic review

    PubMed Central

    Nguyen, Minh-Nha Rhylie; Mosel, Cassandra

    2017-01-01

    Background: Medication errors represent a significant but often preventable cause of morbidity and mortality in neonates. The objective of this systematic review was to determine the effectiveness of interventions to reduce neonatal medication errors. Methods: A systematic review was undertaken of all comparative and noncomparative studies published in any language, identified from searches of PubMed and EMBASE and reference-list checking. Eligible studies were those investigating the impact of any medication safety interventions aimed at reducing medication errors in neonates in the hospital setting. Results: A total of 102 studies were identified that met the inclusion criteria, including 86 comparative and 16 noncomparative studies. Medication safety interventions were classified into six themes: technology (n = 38; e.g. electronic prescribing), organizational (n = 16; e.g. guidelines, policies, and procedures), personnel (n = 13; e.g. staff education), pharmacy (n = 9; e.g. clinical pharmacy service), hazard and risk analysis (n = 8; e.g. error detection tools), and multifactorial (n = 18; e.g. any combination of previous interventions). Significant variability was evident across all included studies, with differences in intervention strategies, trial methods, types of medication errors evaluated, and how medication errors were identified and evaluated. Most studies demonstrated an appreciable risk of bias. The vast majority of studies (>90%) demonstrated a reduction in medication errors. A similar median reduction of 50–70% in medication errors was evident across studies included within each of the identified themes, but findings varied considerably from a 16% increase in medication errors to a 100% reduction in medication errors. Conclusion: While neonatal medication errors can be reduced through multiple interventions aimed at improving the medication use process, no single intervention appeared clearly superior. Further research is required to evaluate the relative cost-effectiveness of the various medication safety interventions to facilitate decisions regarding uptake and implementation into clinical practice. PMID:29387337

  9. Three independent one-dimensional margins for single-fraction frameless stereotactic radiosurgery brain cases using CBCT

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhang, Qinghui; Chan, Maria F.; Burman, Chandra

    2013-12-15

    Purpose: Setting a proper margin is crucial for not only delivering the required radiation dose to a target volume, but also reducing the unnecessary radiation to the adjacent organs at risk. This study investigated the independent one-dimensional symmetric and asymmetric margins between the clinical target volume (CTV) and the planning target volume (PTV) for linac-based single-fraction frameless stereotactic radiosurgery (SRS).Methods: The authors assumed a Dirac delta function for the systematic error of a specific machine and a Gaussian function for the residual setup errors. Margin formulas were then derived in details to arrive at a suitable CTV-to-PTV margin for single-fractionmore » frameless SRS. Such a margin ensured that the CTV would receive the prescribed dose in 95% of the patients. To validate our margin formalism, the authors retrospectively analyzed nine patients who were previously treated with noncoplanar conformal beams. Cone-beam computed tomography (CBCT) was used in the patient setup. The isocenter shifts between the CBCT and linac were measured for a Varian Trilogy linear accelerator for three months. For each plan, the authors shifted the isocenter of the plan in each direction by ±3 mm simultaneously to simulate the worst setup scenario. Subsequently, the asymptotic behavior of the CTV V{sub 80%} for each patient was studied as the setup error approached the CTV-PTV margin.Results: The authors found that the proper margin for single-fraction frameless SRS cases with brain cancer was about 3 mm for the machine investigated in this study. The isocenter shifts between the CBCT and the linac remained almost constant over a period of three months for this specific machine. This confirmed our assumption that the machine systematic error distribution could be approximated as a delta function. This definition is especially relevant to a single-fraction treatment. The prescribed dose coverage for all the patients investigated was 96.1%± 5.5% with an extreme 3-mm setup error in all three directions simultaneously. It was found that the effect of the setup error on dose coverage was tumor location dependent. It mostly affected the tumors located in the posterior part of the brain, resulting in a minimum coverage of approximately 72%. This was entirely due to the unique geometry of the posterior head.Conclusions: Margin expansion formulas were derived for single-fraction frameless SRS such that the CTV would receive the prescribed dose in 95% of the patients treated for brain cancer. The margins defined in this study are machine-specific and account for nonzero mean systematic error. The margin for single-fraction SRS for a group of machines was also derived in this paper.« less

  10. The estimation of the rate of change of yawing moment with sideslip

    NASA Technical Reports Server (NTRS)

    Imlay, Frederick H

    1938-01-01

    Wind-tunnel data are presented on the rate of change of yawing moment with sideslip for tests of 9 complete airplane models, 20 fuselage shapes, and 3 wing models with various combinations of dihedral, sweepback, and twist. The data were collected during a survey of existing information, which was made to find a reliable method of computing the yawing moment due to sideslip. Important errors common to methods of computation used at present appear to be due to large interference effects, the investigation of which will undoubtedly require an extensive program of systematic wind-tunnel tests. At present it is necessary to place considerable reliance on past design experience in proportioning an airplane so as to obtain a reasonable degree of directional stability.

  11. Empirical Analysis of Systematic Communication Errors.

    DTIC Science & Technology

    1981-09-01

    human o~ . .... 8 components in communication systems. (Systematic errors were defined to be those that occur regularly in human communication links...phase of the human communication process and focuses on the linkage between a specific piece of information (and the receiver) and the transmission...communication flow. (2) Exchange. Exchange is the next phase in human communication and entails a concerted effort on the part of the sender and receiver to share

  12. Systematics errors in strong lens modeling

    NASA Astrophysics Data System (ADS)

    Johnson, Traci L.; Sharon, Keren; Bayliss, Matthew B.

    We investigate how varying the number of multiple image constraints and the available redshift information can influence the systematic errors of strong lens models, specifically, the image predictability, mass distribution, and magnifications of background sources. This work will not only inform upon Frontier Field science, but also for work on the growing collection of strong lensing galaxy clusters, most of which are less massive and are capable of lensing a handful of galaxies.

  13. Low-Energy Proton Testing Methodology

    NASA Technical Reports Server (NTRS)

    Pellish, Jonathan A.; Marshall, Paul W.; Heidel, David F.; Schwank, James R.; Shaneyfelt, Marty R.; Xapsos, M.A.; Ladbury, Raymond L.; LaBel, Kenneth A.; Berg, Melanie; Kim, Hak S.; hide

    2009-01-01

    Use of low-energy protons and high-energy light ions is becoming necessary to investigate current-generation SEU thresholds. Systematic errors can dominate measurements made with low-energy protons. Range and energy straggling contribute to systematic error. Low-energy proton testing is not a step-and-repeat process. Low-energy protons and high-energy light ions can be used to measure SEU cross section of single sensitive features; important for simulation.

  14. Focusing cosmic telescopes: systematics of strong lens modeling

    NASA Astrophysics Data System (ADS)

    Johnson, Traci Lin; Sharon, Keren q.

    2018-01-01

    The use of strong gravitational lensing by galaxy clusters has become a popular method for studying the high redshift universe. While diverse in computational methods, lens modeling techniques have grasped the means for determining statistical errors on cluster masses and magnifications. However, the systematic errors have yet to be quantified, arising from the number of constraints, availablity of spectroscopic redshifts, and various types of image configurations. I will be presenting my dissertation work on quantifying systematic errors in parametric strong lensing techniques. I have participated in the Hubble Frontier Fields lens model comparison project, using simulated clusters to compare the accuracy of various modeling techniques. I have extended this project to understanding how changing the quantity of constraints affects the mass and magnification. I will also present my recent work extending these studies to clusters in the Outer Rim Simulation. These clusters are typical of the clusters found in wide-field surveys, in mass and lensing cross-section. These clusters have fewer constraints than the HFF clusters and thus, are more susceptible to systematic errors. With the wealth of strong lensing clusters discovered in surveys such as SDSS, SPT, DES, and in the future, LSST, this work will be influential in guiding the lens modeling efforts and follow-up spectroscopic campaigns.

  15. Chemistry-Transport Modeling of the Satellite Observed Distribution of Tropical Tropospheric Ozone

    NASA Technical Reports Server (NTRS)

    Peters, Wouter; Krol, Maarten; Dentener, Frank; Thompson, Anne M.; Leloeveld, Jos; Bhartia, P. K. (Technical Monitor)

    2002-01-01

    We have compared the 14-year record of satellite derived tropical tropospheric ozone columns (TTOC) from the NIMBUS-7 Total Ozone Mapping Spectrometer (TOMS) to TTOC calculated by a chemistry-transport model (CTM). An objective measure of error, based on the zonal distribution of TTOC in the tropics, is applied to perform this comparison systematically. In addition, the sensitivity of the model to several key processes in the tropics is quantified to select directions for future improvements. The comparisons indicate a widespread, systematic (20%) discrepancy over the tropical Atlantic Ocean, which maximizes during austral Spring. Although independent evidence from ozonesondes shows that some of the disagreement is due to satellite over-estimate of TTOC, the Atlantic mismatch is largely due to a misrepresentation of seasonally recurring processes in the model. Only minor differences between the model and observations over the Pacific occur, mostly due to interannual variability not captured by the model. Although chemical processes determine the TTOC extent, dynamical processes dominate the TTOC distribution, as the use of actual meteorology pertaining to the year of observations always leads to a better agreement with TTOC observations than using a random year or a climatology. The modeled TTOC is remarkably insensitive to many model parameters due to efficient feedbacks in the ozone budget. Nevertheless, the simulations would profit from an improved biomass burning calendar, as well as from an increase in NOX abundances in free tropospheric biomass burning plumes. The model showed the largest response to lightning NOX emissions, but systematic improvements could not be found. The use of multi-year satellite derived tropospheric data to systematically test and improve a CTM is a promising new addition to existing methods of model validation, and is a first step to integrating tropospheric satellite observations into global ozone modeling studies. Conversely,the CTM may suggest improvements to evolving satellite retrievals for tropospheric ozone.

  16. A probabilistic approach to remote compositional analysis of planetary surfaces

    USGS Publications Warehouse

    Lapotre, Mathieu G.A.; Ehlmann, Bethany L.; Minson, Sarah E.

    2017-01-01

    Reflected light from planetary surfaces provides information, including mineral/ice compositions and grain sizes, by study of albedo and absorption features as a function of wavelength. However, deconvolving the compositional signal in spectra is complicated by the nonuniqueness of the inverse problem. Trade-offs between mineral abundances and grain sizes in setting reflectance, instrument noise, and systematic errors in the forward model are potential sources of uncertainty, which are often unquantified. Here we adopt a Bayesian implementation of the Hapke model to determine sets of acceptable-fit mineral assemblages, as opposed to single best fit solutions. We quantify errors and uncertainties in mineral abundances and grain sizes that arise from instrument noise, compositional end members, optical constants, and systematic forward model errors for two suites of ternary mixtures (olivine-enstatite-anorthite and olivine-nontronite-basaltic glass) in a series of six experiments in the visible-shortwave infrared (VSWIR) wavelength range. We show that grain sizes are generally poorly constrained from VSWIR spectroscopy. Abundance and grain size trade-offs lead to typical abundance errors of ≤1 wt % (occasionally up to ~5 wt %), while ~3% noise in the data increases errors by up to ~2 wt %. Systematic errors further increase inaccuracies by a factor of 4. Finally, phases with low spectral contrast or inaccurate optical constants can further increase errors. Overall, typical errors in abundance are <10%, but sometimes significantly increase for specific mixtures, prone to abundance/grain-size trade-offs that lead to high unmixing uncertainties. These results highlight the need for probabilistic approaches to remote determination of planetary surface composition.

  17. Cognitive fatigue effects on physical performance: A systematic review and meta-analysis.

    PubMed

    McMorris, Terry; Barwood, Martin; Hale, Beverley J; Dicks, Matt; Corbett, Jo

    2018-05-01

    Recent research has examined the effect that undertaking a cognitively fatiguing task for ≤90 min has on subsequent physical performance. Cognitive fatigue is claimed to affect subsequent physical performance by inducing energy depletion in the brain, depletion of brain catecholamine neurotransmitters or changes in motivation. Observation of the psychophysiology and neurochemistry literature questions the ability of 90 min' cognitive activity to deplete energy or catecholamine resources. The purpose of this study, therefore, was to examine the evidence for cognitive fatigue having an effect on subsequent physical performance. A systematic, meta-analytic review was undertaken. We found a small but significant pooled effect size based on comparison between physical performance post-cognitive fatigue compared to post-control (g = -0.27, SE = -0.12, 95% CI -0.49 to -0.04, Z(10) = -2.283, p < 0.05). However, the results were not heterogenous (Q(10) = 2.789, p > 0.10, Τ 2  < 0.001), suggesting that the pooled effect size does not amount to a real effect and differences are due to random error. No publication bias was evident (Kendall's τ = -0.07, p > 0.05). Thus, the results are somewhat contradictory. The pooled effect size shows a small but significant negative effect of cognitive fatigue, however tests of heterogeneity show that the results are due to random error. Future research should use neuroscientific tests to ensure that cognitive fatigue has been achieved. Copyright © 2018 Elsevier Inc. All rights reserved.

  18. Accurate Magnetometer/Gyroscope Attitudes Using a Filter with Correlated Sensor Noise

    NASA Technical Reports Server (NTRS)

    Sedlak, J.; Hashmall, J.

    1997-01-01

    Magnetometers and gyroscopes have been shown to provide very accurate attitudes for a variety of spacecraft. These results have been obtained, however, using a batch-least-squares algorithm and long periods of data. For use in onboard applications, attitudes are best determined using sequential estimators such as the Kalman filter. When a filter is used to determine attitudes using magnetometer and gyroscope data for input, the resulting accuracy is limited by both the sensor accuracies and errors inherent in the Earth magnetic field model. The Kalman filter accounts for the random component by modeling the magnetometer and gyroscope errors as white noise processes. However, even when these tuning parameters are physically realistic, the rate biases (included in the state vector) have been found to show systematic oscillations. These are attributed to the field model errors. If the gyroscope noise is sufficiently small, the tuned filter 'memory' will be long compared to the orbital period. In this case, the variations in the rate bias induced by field model errors are substantially reduced. Mistuning the filter to have a short memory time leads to strongly oscillating rate biases and increased attitude errors. To reduce the effect of the magnetic field model errors, these errors are estimated within the filter and used to correct the reference model. An exponentially-correlated noise model is used to represent the filter estimate of the systematic error. Results from several test cases using in-flight data from the Compton Gamma Ray Observatory are presented. These tests emphasize magnetometer errors, but the method is generally applicable to any sensor subject to a combination of random and systematic noise.

  19. The Effects of Bar-coding Technology on Medication Errors: A Systematic Literature Review.

    PubMed

    Hutton, Kevin; Ding, Qian; Wellman, Gregory

    2017-02-24

    The bar-coding technology adoptions have risen drastically in U.S. health systems in the past decade. However, few studies have addressed the impact of bar-coding technology with strong prospective methodologies and the research, which has been conducted from both in-pharmacy and bedside implementations. This systematic literature review is to examine the effectiveness of bar-coding technology on preventing medication errors and what types of medication errors may be prevented in the hospital setting. A systematic search of databases was performed from 1998 to December 2016. Studies measuring the effect of bar-coding technology on medication errors were included in a full-text review. Studies with the outcomes other than medication errors such as efficiency or workarounds were excluded. The outcomes were measured and findings were summarized for each retained study. A total of 2603 articles were initially identified and 10 studies, which used prospective before-and-after study design, were fully reviewed in this article. Of the 10 included studies, 9 took place in the United States, whereas the remaining was conducted in the United Kingdom. One research article focused on bar-coding implementation in a pharmacy setting, whereas the other 9 focused on bar coding within patient care areas. All 10 studies showed overall positive effects associated with bar-coding implementation. The results of this review show that bar-coding technology may reduce medication errors in hospital settings, particularly on preventing targeted wrong dose, wrong drug, wrong patient, unauthorized drug, and wrong route errors.

  20. Minimizing systematic errors from atmospheric multiple scattering and satellite viewing geometry in coastal zone color scanner level IIA imagery

    NASA Technical Reports Server (NTRS)

    Martin, D. L.; Perry, M. J.

    1994-01-01

    Water-leaving radiances and phytoplankton pigment concentrations are calculated from coastal zone color scanner (CZCS) radiance measurements by removing atmospheric Rayleigh and aerosol radiances from the total radiance signal measured at the satellite. The single greatest source of error in CZCS atmospheric correction algorithms in the assumption that these Rayleigh and aerosol radiances are separable. Multiple-scattering interactions between Rayleigh and aerosol components cause systematic errors in calculated aerosol radiances, and the magnitude of these errors is dependent on aerosol type and optical depth and on satellite viewing geometry. A technique was developed which extends the results of previous radiative transfer modeling by Gordon and Castano to predict the magnitude of these systematic errors for simulated CZCS orbital passes in which the ocean is viewed through a modeled, physically realistic atmosphere. The simulated image mathematically duplicates the exact satellite, Sun, and pixel locations of an actual CZCS image. Errors in the aerosol radiance at 443 nm are calculated for a range of aerosol optical depths. When pixels in the simulated image exceed an error threshhold, the corresponding pixels in the actual CZCS image are flagged and excluded from further analysis or from use in image compositing or compilation of pigment concentration databases. Studies based on time series analyses or compositing of CZCS imagery which do not address Rayleigh-aerosol multiple scattering should be interpreted cautiously, since the fundamental assumption used in their atmospheric correction algorithm is flawed.

  1. Statistical and systematic errors in the measurement of weak-lensing Minkowski functionals: Application to the Canada-France-Hawaii Lensing Survey

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shirasaki, Masato; Yoshida, Naoki, E-mail: masato.shirasaki@utap.phys.s.u-tokyo.ac.jp

    2014-05-01

    The measurement of cosmic shear using weak gravitational lensing is a challenging task that involves a number of complicated procedures. We study in detail the systematic errors in the measurement of weak-lensing Minkowski Functionals (MFs). Specifically, we focus on systematics associated with galaxy shape measurements, photometric redshift errors, and shear calibration correction. We first generate mock weak-lensing catalogs that directly incorporate the actual observational characteristics of the Canada-France-Hawaii Lensing Survey (CFHTLenS). We then perform a Fisher analysis using the large set of mock catalogs for various cosmological models. We find that the statistical error associated with the observational effects degradesmore » the cosmological parameter constraints by a factor of a few. The Subaru Hyper Suprime-Cam (HSC) survey with a sky coverage of ∼1400 deg{sup 2} will constrain the dark energy equation of the state parameter with an error of Δw {sub 0} ∼ 0.25 by the lensing MFs alone, but biases induced by the systematics can be comparable to the 1σ error. We conclude that the lensing MFs are powerful statistics beyond the two-point statistics only if well-calibrated measurement of both the redshifts and the shapes of source galaxies is performed. Finally, we analyze the CFHTLenS data to explore the ability of the MFs to break degeneracies between a few cosmological parameters. Using a combined analysis of the MFs and the shear correlation function, we derive the matter density Ω{sub m0}=0.256±{sub 0.046}{sup 0.054}.« less

  2. Systematic reviews of randomised clinical trials examining the effects of psychotherapeutic interventions versus "no intervention" for acute major depressive disorder and a randomised trial examining the effects of "third wave" cognitive therapy versus mentalization-based treatment for acute major depressive disorder.

    PubMed

    Jakobsen, Janus Christian

    2014-10-01

    Major depressive disorder afflicts an estimated 17% of individuals during their lifetimes at tremendous suffering and costs. Cognitive therapy and psychodynamic therapy may be effective treatment options for major depressive disorder, but the effects have only had limited assessment in systematic reviews. The two modern forms of psychotherapy, "third wave" cognitive therapy and mentalization-based treatment, have both gained some ground as treatments of psychiatric disorders. No randomised trial has compared the effects of these two interventions for major depressive disorder. We performed two systematic reviews with meta-analyses and trial sequential analyses using The Cochrane Collaboration methodology examining the effects of cognitive therapy and psycho-dynamic therapy for major depressive disorder. We developed a thorough treatment protocol for a randomised trial with low risks of bias (systematic error) and low risks of random errors ("play of chance") examining the effects of third wave' cognitive therapy versus mentalization-based treatment for major depressive disorder. We conducted a randomised trial according to good clinical practice examining the effects of "third wave" cognitive therapy versus mentalisation-based treatment for major depressive disorder. The first systematic review included five randomised trials examining the effects of psychodynamic therapy versus "no intervention' for major depressive disorder. Altogether the five trials randomised 365 participants who in each trial received similar antidepressants as co-interventions. All trials had high risk of bias. Four trials assessed "interpersonal psychotherapy" and one trial "short psychodynamic supportive psychotherapy". Both of these interventions are different forms of psychodynamic therapy. Meta-analysis showed that psychodynamic therapy significantly reduced depressive symptoms on the Hamilton Depression Rating Scale (HDRS) compared with "no intervention" (mean difference -3.01 (95% confidence interval -3.98 to -2.03; p = 0.00001), no significant heterogeneity between trials). Trial sequential analysis confirmed this result. The second systematic review included 12 randomised trials examining the effects of cognitive therapy versus "no intervention" for major depressive disorder. Altogether a total of 669 participants were randomised. All trials had high risk of bias. Meta-analysis showed that cognitive therapy significantly reduced depressive symptoms on the HDRS compared with "no intervention" (four trials; mean difference -3.05 (95% confidence interval, -5.23 to -0.87; p = 0.006)). Trial sequential analysis could not confirm this result. The trial protocol showed that it seemed feasible to conduct a randomised trial with low risks of bias and low risks of random errors examining the effects of "third wave" cognitive therapy versus mentalization-based therapy in a setting in the Danish healthcare system. It turned out to be much more difficult to recruit participants in the randomised trial than expected. We only included about half of the planned participants. The results from the randomised trial showed that participants randomised to "third wave" therapy compared with participants randomised to mentalization-based treatment had borderline significantly lower HDRS scores at 18 weeks in an unadjusted analysis (mean difference -4.14 score; 95% CI -8.30 to 0.03; p = 0.051). In the adjusted analysis, the difference was significant (p = 0.039). Five (22.7%) of the participants randomised to "third wave" cognitive therapy had remission at 18 weeks versus none of the participants randomised to mentalization-based treatment (p = 0.049). Sequential analysis showed that these findings could be due to random errors. No significant differences between the two groups was found regarding Beck's Depression Inventory (BDI II), Symptom Checklist 90 Revised (SCL 90-R), and The World Health Organization-Five Well-being Index 1999 (WHO 5). We concluded that cognitive therapy and psychodynamic therapy might be effective interventions for depression measured on HDRS and BDI, but the review results might be erroneous due to risks of bias and random errors. Furthermore, the effects seem relatively small. The trial protocol showed that it was possible to develop a protocol for a randomised trial examining the effects of "third wave" cognitive therapy versus mentalization-based treatment with low risks of bias and low risks of random errors. Our trial results showed that "third wave" cognitive therapy might be a more effective intervention for depressive symptoms measured on the HDRS compared with mentalization-based treatment. The two interventions did not seem to differ significantly regarding BDI II, SCL 90-R, and WHO 5. More randomised trials with low risks of bias and low risks of random errors are needed to assess the effects of cognitive therapy, psychodynamic therapy, "third wave" cognitive therapy, and mentalization-based treatment.

  3. The Calibration and error analysis of Shallow water (less than 100m) Multibeam Echo-Sounding System

    NASA Astrophysics Data System (ADS)

    Lin, M.

    2016-12-01

    Multibeam echo-sounders(MBES) have been developed to gather bathymetric and acoustic data for more efficient and more exact mapping of the oceans. This gain in efficiency does not come without drawbacks. Indeed, the finer the resolution of remote sensing instruments, the harder they are to calibrate. This is the case for multibeam echo-sounding systems (MBES). We are no longer dealing with sounding lines where the bathymetry must be interpolated between them to engender consistent representations of the seafloor. We now need to match together strips (swaths) of totally ensonified seabed. As a consequence, misalignment and time lag problems emerge as artifacts in the bathymetry from adjacent or overlapping swaths, particularly when operating in shallow water. More importantly, one must still verify that bathymetric data meet the accuracy requirements. This paper aims to summarize the system integration involved with MBES and identify the various source of error pertaining to shallow water survey (100m and less). A systematic method for the calibration of shallow water MBES is proposed and presented as a set of field procedures. The procedures aim at detecting, quantifying and correcting systematic instrumental and installation errors. Hence, calibrating for variations of the speed of sound in the water column, which is natural in origin, is not addressed in this document. The data which used in calibration will reference International Hydrographic Organization(IHO) and other related standards to compare. This paper aims to set a model in the specific area which can calibrate the error due to instruments. We will construct a procedure in patch test and figure out all the possibilities may make sounding data with error then calculate the error value to compensate. In general, the problems which have to be solved is the patch test's 4 correction in the Hypack system 1.Roll 2.GPS Latency 3.Pitch 4.Yaw. Cause These 4 correction affect each others, we run each survey line to calibrate. GPS Latency is synchronized GPS to echo sounder. Future studies concerning any shallower portion of an area, by this procedure can be more accurate sounding value and can do more detailed research.

  4. An Analysis of Computational Errors in the Use of Division Algorithms by Fourth-Grade Students.

    ERIC Educational Resources Information Center

    Stefanich, Greg P.; Rokusek, Teri

    1992-01-01

    Presents a study that analyzed errors made by randomly chosen fourth grade students (25 of 57) while using the division algorithm and investigated the effect of remediation on identified systematic errors. Results affirm that error pattern diagnosis and directed remediation lead to new learning and long-term retention. (MDH)

  5. Increased errors and decreased performance at night: A systematic review of the evidence concerning shift work and quality.

    PubMed

    de Cordova, Pamela B; Bradford, Michelle A; Stone, Patricia W

    2016-02-15

    Shift workers have worse health outcomes than employees who work standard business hours. However, it is unclear how this poorer health shift may be related to employee work productivity. The purpose of this systematic review is to assess the relationship between shift work and errors and performance. Searches of MEDLINE/PubMed, EBSCOhost, and CINAHL were conducted to identify articles that examined the relationship between shift work, errors, quality, productivity, and performance. All articles were assessed for study quality. A total of 435 abstracts were screened with 13 meeting inclusion criteria. Eight studies were rated to be of strong, methodological quality. Nine studies demonstrated a positive relationship that night shift workers committed more errors and had decreased performance. Night shift workers have worse health that may contribute to errors and decreased performance in the workplace.

  6. Filtering Methods for Error Reduction in Spacecraft Attitude Estimation Using Quaternion Star Trackers

    NASA Technical Reports Server (NTRS)

    Calhoun, Philip C.; Sedlak, Joseph E.; Superfin, Emil

    2011-01-01

    Precision attitude determination for recent and planned space missions typically includes quaternion star trackers (ST) and a three-axis inertial reference unit (IRU). Sensor selection is based on estimates of knowledge accuracy attainable from a Kalman filter (KF), which provides the optimal solution for the case of linear dynamics with measurement and process errors characterized by random Gaussian noise with white spectrum. Non-Gaussian systematic errors in quaternion STs are often quite large and have an unpredictable time-varying nature, particularly when used in non-inertial pointing applications. Two filtering methods are proposed to reduce the attitude estimation error resulting from ST systematic errors, 1) extended Kalman filter (EKF) augmented with Markov states, 2) Unscented Kalman filter (UKF) with a periodic measurement model. Realistic assessments of the attitude estimation performance gains are demonstrated with both simulation and flight telemetry data from the Lunar Reconnaissance Orbiter.

  7. A water-vapor radiometer error model. [for ionosphere in geodetic microwave techniques

    NASA Technical Reports Server (NTRS)

    Beckman, B.

    1985-01-01

    The water-vapor radiometer (WVR) is used to calibrate unpredictable delays in the wet component of the troposphere in geodetic microwave techniques such as very-long-baseline interferometry (VLBI) and Global Positioning System (GPS) tracking. Based on experience with Jet Propulsion Laboratory (JPL) instruments, the current level of accuracy in wet-troposphere calibration limits the accuracy of local vertical measurements to 5-10 cm. The goal for the near future is 1-3 cm. Although the WVR is currently the best calibration method, many instruments are prone to systematic error. In this paper, a treatment of WVR data is proposed and evaluated. This treatment reduces the effect of WVR systematic errors by estimating parameters that specify an assumed functional form for the error. The assumed form of the treatment is evaluated by comparing the results of two similar WVR's operating near each other. Finally, the observability of the error parameters is estimated by covariance analysis.

  8. Exact free oscillation spectra, splitting functions and the resolvability of Earth's density structure

    NASA Astrophysics Data System (ADS)

    Akbarashrafi, F.; Al-Attar, D.; Deuss, A.; Trampert, J.; Valentine, A. P.

    2018-04-01

    Seismic free oscillations, or normal modes, provide a convenient tool to calculate low-frequency seismograms in heterogeneous Earth models. A procedure called `full mode coupling' allows the seismic response of the Earth to be computed. However, in order to be theoretically exact, such calculations must involve an infinite set of modes. In practice, only a finite subset of modes can be used, introducing an error into the seismograms. By systematically increasing the number of modes beyond the highest frequency of interest in the seismograms, we investigate the convergence of full-coupling calculations. As a rule-of-thumb, it is necessary to couple modes 1-2 mHz above the highest frequency of interest, although results depend upon the details of the Earth model. This is significantly higher than has previously been assumed. Observations of free oscillations also provide important constraints on the heterogeneous structure of the Earth. Historically, this inference problem has been addressed by the measurement and interpretation of splitting functions. These can be seen as secondary data extracted from low frequency seismograms. The measurement step necessitates the calculation of synthetic seismograms, but current implementations rely on approximations referred to as self- or group-coupling and do not use fully accurate seismograms. We therefore also investigate whether a systematic error might be present in currently published splitting functions. We find no evidence for any systematic bias, but published uncertainties must be doubled to properly account for the errors due to theoretical omissions and regularization in the measurement process. Correspondingly, uncertainties in results derived from splitting functions must also be increased. As is well known, density has only a weak signal in low-frequency seismograms. Our results suggest this signal is of similar scale to the true uncertainties associated with currently published splitting functions. Thus, it seems that great care must be taken in any attempt to robustly infer details of Earth's density structure using current splitting functions.

  9. Dark Energy Survey Year 1 Results: Cross-Correlation Redshifts - Methods and Systematics Characterization

    DOE PAGES

    Gatti, M.

    2018-02-22

    We use numerical simulations to characterize the performance of a clustering-based method to calibrate photometric redshift biases. In particular, we cross-correlate the weak lensing (WL) source galaxies from the Dark Energy Survey Year 1 (DES Y1) sample with redMaGiC galaxies (luminous red galaxies with secure photometric red- shifts) to estimate the redshift distribution of the former sample. The recovered redshift distributions are used to calibrate the photometric redshift bias of standard photo-z methods applied to the same source galaxy sample. We also apply the method to three photo-z codes run in our simulated data: Bayesian Photometric Redshift (BPZ), Directional Neighborhoodmore » Fitting (DNF), and Random Forest-based photo-z (RF). We characterize the systematic uncertainties of our calibration procedure, and find that these systematic uncertainties dominate our error budget. The dominant systematics are due to our assumption of unevolving bias and clustering across each redshift bin, and to differences between the shapes of the redshift distributions derived by clustering vs photo-z's. The systematic uncertainty in the mean redshift bias of the source galaxy sample is z ≲ 0.02, though the precise value depends on the redshift bin under consideration. Here, we discuss possible ways to mitigate the impact of our dominant systematics in future analyses.« less

  10. Dark Energy Survey Year 1 Results: Cross-Correlation Redshifts - Methods and Systematics Characterization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gatti, M.

    We use numerical simulations to characterize the performance of a clustering-based method to calibrate photometric redshift biases. In particular, we cross-correlate the weak lensing (WL) source galaxies from the Dark Energy Survey Year 1 (DES Y1) sample with redMaGiC galaxies (luminous red galaxies with secure photometric red- shifts) to estimate the redshift distribution of the former sample. The recovered redshift distributions are used to calibrate the photometric redshift bias of standard photo-z methods applied to the same source galaxy sample. We also apply the method to three photo-z codes run in our simulated data: Bayesian Photometric Redshift (BPZ), Directional Neighborhoodmore » Fitting (DNF), and Random Forest-based photo-z (RF). We characterize the systematic uncertainties of our calibration procedure, and find that these systematic uncertainties dominate our error budget. The dominant systematics are due to our assumption of unevolving bias and clustering across each redshift bin, and to differences between the shapes of the redshift distributions derived by clustering vs photo-z's. The systematic uncertainty in the mean redshift bias of the source galaxy sample is z ≲ 0.02, though the precise value depends on the redshift bin under consideration. Here, we discuss possible ways to mitigate the impact of our dominant systematics in future analyses.« less

  11. A cognitive taxonomy of medical errors.

    PubMed

    Zhang, Jiajie; Patel, Vimla L; Johnson, Todd R; Shortliffe, Edward H

    2004-06-01

    Propose a cognitive taxonomy of medical errors at the level of individuals and their interactions with technology. Use cognitive theories of human error and human action to develop the theoretical foundations of the taxonomy, develop the structure of the taxonomy, populate the taxonomy with examples of medical error cases, identify cognitive mechanisms for each category of medical error under the taxonomy, and apply the taxonomy to practical problems. Four criteria were used to evaluate the cognitive taxonomy. The taxonomy should be able (1) to categorize major types of errors at the individual level along cognitive dimensions, (2) to associate each type of error with a specific underlying cognitive mechanism, (3) to describe how and explain why a specific error occurs, and (4) to generate intervention strategies for each type of error. The proposed cognitive taxonomy largely satisfies the four criteria at a theoretical and conceptual level. Theoretically, the proposed cognitive taxonomy provides a method to systematically categorize medical errors at the individual level along cognitive dimensions, leads to a better understanding of the underlying cognitive mechanisms of medical errors, and provides a framework that can guide future studies on medical errors. Practically, it provides guidelines for the development of cognitive interventions to decrease medical errors and foundation for the development of medical error reporting system that not only categorizes errors but also identifies problems and helps to generate solutions. To validate this model empirically, we will next be performing systematic experimental studies.

  12. Removal of batch effects using distribution-matching residual networks.

    PubMed

    Shaham, Uri; Stanton, Kelly P; Zhao, Jun; Li, Huamin; Raddassi, Khadir; Montgomery, Ruth; Kluger, Yuval

    2017-08-15

    Sources of variability in experimentally derived data include measurement error in addition to the physical phenomena of interest. This measurement error is a combination of systematic components, originating from the measuring instrument and random measurement errors. Several novel biological technologies, such as mass cytometry and single-cell RNA-seq (scRNA-seq), are plagued with systematic errors that may severely affect statistical analysis if the data are not properly calibrated. We propose a novel deep learning approach for removing systematic batch effects. Our method is based on a residual neural network, trained to minimize the Maximum Mean Discrepancy between the multivariate distributions of two replicates, measured in different batches. We apply our method to mass cytometry and scRNA-seq datasets, and demonstrate that it effectively attenuates batch effects. our codes and data are publicly available at https://github.com/ushaham/BatchEffectRemoval.git. yuval.kluger@yale.edu. Supplementary data are available at Bioinformatics online. © The Author (2017). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com

  13. Improved methods for the measurement and analysis of stellar magnetic fields

    NASA Technical Reports Server (NTRS)

    Saar, Steven H.

    1988-01-01

    The paper presents several improved methods for the measurement of magnetic fields on cool stars which take into account simple radiative transfer effects and the exact Zeeman patterns. Using these methods, high-resolution, low-noise data can be fitted with theoretical line profiles to determine the mean magnetic field strength in stellar active regions and a model-dependent fraction of the stellar surface (filling factor) covered by these regions. Random errors in the derived field strength and filling factor are parameterized in terms of signal-to-noise ratio, wavelength, spectral resolution, stellar rotation rate, and the magnetic parameters themselves. Weak line blends, if left uncorrected, can have significant systematic effects on the derived magnetic parameters, and thus several methods are developed to compensate partially for them. The magnetic parameters determined by previous methods likely have systematic errors because of such line blends and because of line saturation effects. Other sources of systematic error are explored in detail. These sources of error currently make it difficult to determine the magnetic parameters of individual stars to better than about + or - 20 percent.

  14. Local blur analysis and phase error correction method for fringe projection profilometry systems.

    PubMed

    Rao, Li; Da, Feipeng

    2018-05-20

    We introduce a flexible error correction method for fringe projection profilometry (FPP) systems in the presence of local blur phenomenon. Local blur caused by global light transport such as camera defocus, projector defocus, and subsurface scattering will cause significant systematic errors in FPP systems. Previous methods, which adopt high-frequency patterns to separate the direct and global components, fail when the global light phenomenon occurs locally. In this paper, the influence of local blur on phase quality is thoroughly analyzed, and a concise error correction method is proposed to compensate the phase errors. For defocus phenomenon, this method can be directly applied. With the aid of spatially varying point spread functions and local frontal plane assumption, experiments show that the proposed method can effectively alleviate the system errors and improve the final reconstruction accuracy in various scenes. For a subsurface scattering scenario, if the translucent object is dominated by multiple scattering, the proposed method can also be applied to correct systematic errors once the bidirectional scattering-surface reflectance distribution function of the object material is measured.

  15. Atmospheric Dispersion Effects in Weak Lensing Measurements

    DOE PAGES

    Plazas, Andrés Alejandro; Bernstein, Gary

    2012-10-01

    The wavelength dependence of atmospheric refraction causes elongation of finite-bandwidth images along the elevation vector, which produces spurious signals in weak gravitational lensing shear measurements unless this atmospheric dispersion is calibrated and removed to high precision. Because astrometric solutions and PSF characteristics are typically calibrated from stellar images, differences between the reference stars' spectra and the galaxies' spectra will leave residual errors in both the astrometric positions (dr) and in the second moment (width) of the wavelength-averaged PSF (dv) for galaxies.We estimate the level of dv that will induce spurious weak lensing signals in PSF-corrected galaxy shapes that exceed themore » statistical errors of the DES and the LSST cosmic-shear experiments. We also estimate the dr signals that will produce unacceptable spurious distortions after stacking of exposures taken at different airmasses and hour angles. We also calculate the errors in the griz bands, and find that dispersion systematics, uncorrected, are up to 6 and 2 times larger in g and r bands,respectively, than the requirements for the DES error budget, but can be safely ignored in i and z bands. For the LSST requirements, the factors are about 30, 10, and 3 in g, r, and i bands,respectively. We find that a simple correction linear in galaxy color is accurate enough to reduce dispersion shear systematics to insignificant levels in the r band for DES and i band for LSST,but still as much as 5 times than the requirements for LSST r-band observations. More complex corrections will likely be able to reduce the systematic cosmic-shear errors below statistical errors for LSST r band. But g-band effects remain large enough that it seems likely that induced systematics will dominate the statistical errors of both surveys, and cosmic-shear measurements should rely on the redder bands.« less

  16. Ground state properties of 3d metals from self-consistent GW approach

    DOE PAGES

    Kutepov, Andrey L.

    2017-10-06

    The self consistent GW approach (scGW) has been applied to calculate the ground state properties (equilibrium Wigner–Seitz radius S WZ and bulk modulus B) of 3d transition metals Sc, Ti, V, Fe, Co, Ni, and Cu. The approach systematically underestimates S WZ with average relative deviation from the experimental data of about 1% and it overestimates the calculated bulk modulus with relative error of about 25%. We show that scGW is superior in accuracy as compared to the local density approximation but it is less accurate than the generalized gradient approach for the materials studied. If compared to the randommore » phase approximation, scGW is slightly less accurate, but its error for 3d metals looks more systematic. Lastly, the systematic nature of the deviation from the experimental data suggests that the next order of the perturbation theory should allow one to reduce the error.« less

  17. Ground state properties of 3d metals from self-consistent GW approach

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kutepov, Andrey L.

    The self consistent GW approach (scGW) has been applied to calculate the ground state properties (equilibrium Wigner–Seitz radius S WZ and bulk modulus B) of 3d transition metals Sc, Ti, V, Fe, Co, Ni, and Cu. The approach systematically underestimates S WZ with average relative deviation from the experimental data of about 1% and it overestimates the calculated bulk modulus with relative error of about 25%. We show that scGW is superior in accuracy as compared to the local density approximation but it is less accurate than the generalized gradient approach for the materials studied. If compared to the randommore » phase approximation, scGW is slightly less accurate, but its error for 3d metals looks more systematic. Lastly, the systematic nature of the deviation from the experimental data suggests that the next order of the perturbation theory should allow one to reduce the error.« less

  18. A systematic comparison of error correction enzymes by next-generation sequencing

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lubock, Nathan B.; Zhang, Di; Sidore, Angus M.

    Gene synthesis, the process of assembling genelength fragments from shorter groups of oligonucleotides (oligos), is becoming an increasingly important tool in molecular and synthetic biology. The length, quality and cost of gene synthesis are limited by errors produced during oligo synthesis and subsequent assembly. Enzymatic error correction methods are cost-effective means to ameliorate errors in gene synthesis. Previous analyses of these methods relied on cloning and Sanger sequencing to evaluate their efficiencies, limiting quantitative assessment. Here, we develop a method to quantify errors in synthetic DNA by next-generation sequencing. We analyzed errors in model gene assemblies and systematically compared sixmore » different error correction enzymes across 11 conditions. We find that ErrASE and T7 Endonuclease I are the most effective at decreasing average error rates (up to 5.8-fold relative to the input), whereas MutS is the best for increasing the number of perfect assemblies (up to 25.2-fold). We are able to quantify differential specificities such as ErrASE preferentially corrects C/G transversions whereas T7 Endonuclease I preferentially corrects A/T transversions. More generally, this experimental and computational pipeline is a fast, scalable and extensible way to analyze errors in gene assemblies, to profile error correction methods, and to benchmark DNA synthesis methods.« less

  19. A systematic comparison of error correction enzymes by next-generation sequencing

    DOE PAGES

    Lubock, Nathan B.; Zhang, Di; Sidore, Angus M.; ...

    2017-08-01

    Gene synthesis, the process of assembling genelength fragments from shorter groups of oligonucleotides (oligos), is becoming an increasingly important tool in molecular and synthetic biology. The length, quality and cost of gene synthesis are limited by errors produced during oligo synthesis and subsequent assembly. Enzymatic error correction methods are cost-effective means to ameliorate errors in gene synthesis. Previous analyses of these methods relied on cloning and Sanger sequencing to evaluate their efficiencies, limiting quantitative assessment. Here, we develop a method to quantify errors in synthetic DNA by next-generation sequencing. We analyzed errors in model gene assemblies and systematically compared sixmore » different error correction enzymes across 11 conditions. We find that ErrASE and T7 Endonuclease I are the most effective at decreasing average error rates (up to 5.8-fold relative to the input), whereas MutS is the best for increasing the number of perfect assemblies (up to 25.2-fold). We are able to quantify differential specificities such as ErrASE preferentially corrects C/G transversions whereas T7 Endonuclease I preferentially corrects A/T transversions. More generally, this experimental and computational pipeline is a fast, scalable and extensible way to analyze errors in gene assemblies, to profile error correction methods, and to benchmark DNA synthesis methods.« less

  20. An evaluation of water vapor radiometer data for calibration of the wet path delay in very long baseline interferometry experiments

    NASA Technical Reports Server (NTRS)

    Kuehn, C. E.; Himwich, W. E.; Clark, T. A.; Ma, C.

    1991-01-01

    The internal consistency of the baseline-length measurements derived from analysis of several independent VLBI experiments is an estimate of the measurement precision. The paper investigates whether the inclusion of water vapor radiometer (WVR) data as an absolute calibration of the propagation delay due to water vapor improves the precision of VLBI baseline-length measurements. The paper analyzes 28 International Radio Interferometric Surveying runs between June 1988 and January 1989; WVR measurements were made during each session. The addition of WVR data decreased the scatter of the length measurements of the baselines by 5-10 percent. The observed reduction in the scatter of the baseline lengths is less than what is expected from the behavior of the formal errors, which suggest that the baseline-length measurement precision should improve 10-20 percent if WVR data are included in the analysis. The discrepancy between the formal errors and the baseline-length results can be explained as the consequence of systematic errors in the dry-mapping function parameters, instrumental biases in the WVR and the barometer, or both.

  1. Coarse-graining errors and numerical optimization using a relative entropy framework

    NASA Astrophysics Data System (ADS)

    Chaimovich, Aviel; Shell, M. Scott

    2011-03-01

    The ability to generate accurate coarse-grained models from reference fully atomic (or otherwise "first-principles") ones has become an important component in modeling the behavior of complex molecular systems with large length and time scales. We recently proposed a novel coarse-graining approach based upon variational minimization of a configuration-space functional called the relative entropy, Srel, that measures the information lost upon coarse-graining. Here, we develop a broad theoretical framework for this methodology and numerical strategies for its use in practical coarse-graining settings. In particular, we show that the relative entropy offers tight control over the errors due to coarse-graining in arbitrary microscopic properties, and suggests a systematic approach to reducing them. We also describe fundamental connections between this optimization methodology and other coarse-graining strategies like inverse Monte Carlo, force matching, energy matching, and variational mean-field theory. We suggest several new numerical approaches to its minimization that provide new coarse-graining strategies. Finally, we demonstrate the application of these theoretical considerations and algorithms to a simple, instructive system and characterize convergence and errors within the relative entropy framework.

  2. Mitigation of Angle Tracking Errors Due to Color Dependent Centroid Shifts in SIM-Lite

    NASA Technical Reports Server (NTRS)

    Nemati, Bijan; An, Xin; Goullioud, Renaud; Shao, Michael; Shen, Tsae-Pyng; Wehmeier, Udo J.; Weilert, Mark A.; Wang, Xu; Werne, Thomas A.; Wu, Janet P.; hide

    2010-01-01

    The SIM-Lite astrometric interferometer will search for Earth-size planets in the habitable zones of nearby stars. In this search the interferometer will monitor the astrometric position of candidate stars relative to nearby reference stars over the course of a 5 year mission. The elemental measurement is the angle between a target star and a reference star. This is a two-step process, in which the interferometer will each time need to use its controllable optics to align the starlight in the two arms with each other and with the metrology beams. The sensor for this alignment is an angle tracking CCD camera. Various constraints in the design of the camera subject it to systematic alignment errors when observing a star of one spectrum compared with a start of a different spectrum. This effect is called a Color Dependent Centroid Shift (CDCS) and has been studied extensively with SIM-Lite's SCDU testbed. Here we describe results from the simulation and testing of this error in the SCDU testbed, as well as effective ways that it can be reduced to acceptable levels.

  3. Lunar crescent visibility

    NASA Technical Reports Server (NTRS)

    Doggett, Leroy E.; Schaefer, Bradley E.

    1994-01-01

    We report the results of five Moonwatches, in which more than 2000 observers throughout North America attempted to sight the thin lunar crescent. For each Moonwatch we were able to determine the position of the Lunar Date Line (LDL), the line along which a normal observer has a 50% probability of spotting the Moon. The observational LDLs were then compared with predicted LDLs derived from crescent visibility prediction algorithms. We find that ancient and medieval rules are higly unreliable. More recent empirical criteria, based on the relative altitude and azimuth of the Moon at the time of sunset, have a reasonable accuracy, with the best specific formulation being due to Yallop. The modern theoretical model by Schaefer (based on the physiology of the human eye and the local observing conditions) is found to have the least systematic error, the least average error, and the least maximum error of all models tested. Analysis of the observations also provided information about atmospheric, optical and human factors that affect the observations. We show that observational lunar calendars have a natural bias to begin early.

  4. The effect of the Earth's oblate spheroid shape on the accuracy of a time-of-arrival lightning ground strike locating system

    NASA Technical Reports Server (NTRS)

    Casper, Paul W.; Bent, Rodney B.

    1991-01-01

    The algorithm used in previous technology time-of-arrival lightning mapping systems was based on the assumption that the earth is a perfect spheroid. These systems yield highly-accurate lightning locations, which is their major strength. However, extensive analysis of tower strike data has revealed occasionally significant (one to two kilometer) systematic offset errors which are not explained by the usual error sources. It was determined that these systematic errors reduce dramatically (in some cases) when the oblate shape of the earth is taken into account. The oblate spheroid correction algorithm and a case example is presented.

  5. Error reduction and parameter optimization of the TAPIR method for fast T1 mapping.

    PubMed

    Zaitsev, M; Steinhoff, S; Shah, N J

    2003-06-01

    A methodology is presented for the reduction of both systematic and random errors in T(1) determination using TAPIR, a Look-Locker-based fast T(1) mapping technique. The relations between various sequence parameters were carefully investigated in order to develop recipes for choosing optimal sequence parameters. Theoretical predictions for the optimal flip angle were verified experimentally. Inversion pulse imperfections were identified as the main source of systematic errors in T(1) determination with TAPIR. An effective remedy is demonstrated which includes extension of the measurement protocol to include a special sequence for mapping the inversion efficiency itself. Copyright 2003 Wiley-Liss, Inc.

  6. Automated Mounting Bias Calibration for Airborne LIDAR System

    NASA Astrophysics Data System (ADS)

    Zhang, J.; Jiang, W.; Jiang, S.

    2012-07-01

    Mounting bias is the major error source of Airborne LIDAR system. In this paper, an automated calibration method for estimating LIDAR system mounting parameters is introduced. LIDAR direct geo-referencing model is used to calculate systematic errors. Due to LIDAR footprints discretely sampled, the real corresponding laser points are hardly existence among different strips. The traditional corresponding point methodology does not seem to apply to LIDAR strip registration. We proposed a Virtual Corresponding Point Model to resolve the corresponding problem among discrete laser points. Each VCPM contains a corresponding point and three real laser footprints. Two rules are defined to calculate tie point coordinate from real laser footprints. The Scale Invariant Feature Transform (SIFT) is used to extract corresponding points in LIDAR strips, and the automatic flow of LIDAR system calibration based on VCPM is detailed described. The practical examples illustrate the feasibility and effectiveness of the proposed calibration method.

  7. Development of a coordinate measuring machine (CMM) touch probe using a multi-axis force sensor

    NASA Astrophysics Data System (ADS)

    Park, Jae-jun; Kwon, Kihwan; Cho, Nahmgyoo

    2006-09-01

    Traditional touch trigger probes are widely used on most commercial coordinate measuring machines (CMMs). However, the CMMs with these probes have a systematic error due to the shape of the probe tip and elastic deformation of the stylus resulting from contact pressure with the specimen. In this paper, a new touch probe with a three degrees-of-freedom force sensor is proposed. From relationships between an obtained contact force vector and the geometric shape of the probe, it is possible to calculate the coordinates of the exact probe-specimen contact points. An empirical model of the probe is applied to calculate the coordinates of the contact points and the amount of pretravel. With the proposed probing system, the measuring error induced by the indeterminateness of the probe-specimen contact point and the pretravel can be estimated and compensated for successfully.

  8. Measurement of B(D+-->K(*0)l(+)nu(l)).

    PubMed

    Brandenburg, G; Ershov, A; Kim, D Y-J; Wilson, R; Benslama, K; Eisenstein, B I; Ernst, J; Gollin, G D; Hans, R M; Karliner, I; Lowrey, N; Marsh, M A; Plager, C; Sedlack, C; Selen, M; Thaler, J J; Williams, J; Edwards, K W; Ammar, R; Besson, D; Zhao, X; Anderson, S; Frolov, V V; Kubota, Y; Lee, S J; Li, S Z; Poling, R; Smith, A; Stepaniak, C J; Urheim, J; Ahmed, S; Alam, M S; Jian, L; Saleem, M; Wappler, F; Eckhart, E; Gan, K K; Gwon, C; Hart, T; Honscheid, K; Hufnagel, D; Kagan, H; Kass, R; Pedlar, T K; Thayer, J B; Von Toerne, E; Wilksen, T; Zoeller, M M; Richichi, S J; Severini, H; Skubic, P; Dytman, S A; Nam, S; Savinov, V; Chen, S; Hinson, J W; Lee, J; Miller, D H; Pavlunin, V; Shibata, E I; Shipsey, I P J; Cronin-Hennessy, D; Lyon, A L; Park, C S; Park, W; Thorndike, E H; Coan, T E; Gao, Y S; Liu, F; Maravin, Y; Narsky, I; Stroynowski, R; Ye, J; Artuso, M; Boulahouache, C; Bukin, K; Dambasuren, E; Mountain, R; Skwarnicki, T; Stone, S; Wang, J C; Mahmood, A H; Csorna, S E; Danko, I; Xu, Z; Bonvicini, G; Cinabro, D; Dubrovin, M; McGee, S; Bornheim, A; Lipeles, E; Pappas, S P; Shapiro, A; Sun, W M; Weinstein, A J; Masek, G; Paar, H P; Mahapatra, R; Briere, R A; Chen, G P; Ferguson, T; Tatishvili, G; Vogel, H; Adam, N E; Alexander, J P; Bebek, C; Berkelman, K; Blanc, F; Boisvert, V; Cassel, D G; Drell, P S; Duboscq, J E; Ecklund, K M; Ehrlich, R; Gibbons, L; Gittelman, B; Gray, S W; Hartill, D L; Heltsley, B K; Hsu, L; Jones, C D; Kandaswamy, J; Kreinick, D L; Magerkurth, A; Mahlke-Krüger, H; Meyer, T O; Mistry, N B; Nordberg, E; Palmer, M; Patterson, J R; Peterson, D; Pivarski, J; Riley, D; Sadoff, A J; Schwarthoff, H; Shepherd, M R; Thayer, J G; Urner, D; Valant-Spaight, B; Viehhauser, G; Warburton, A; Weinberger, M; Athar, S B; Avery, P; Stoeck, H; Yelton, J

    2002-11-25

    Using 13.53 fb(-1) of CLEO data, we have measured the ratios of the branching fractions R(+)(e),R(+)(mu) and the combined branching fraction ratio R(+)(l), defined by R(+)(l)=[B(D+-->K(*0)l(+)nu(l))]/[B(D+-->K-pi(+)pi(+))]. We find R(+)(e)=0.74+/-0.04+/-0.05, R(+)(mu)=0.72+/-0.10+/-0.05, and R(+)(l)=0.74+/-0.04+/-0.05, where the first and second errors are statistical and systematic, respectively. The known branching fraction B(D+-->K-pi(+)pi(+)) leads to B(D+-->K(*0)e(+)nu(e))=(6.7+/-0.4+/-0.5+/-0.4)%, B(D+-->K(*0)mu(+)nu(mu))=(6.5+/-0.9+/-0.5+/-0.4)%, and B(D+-->K(*0)l(+)nu(l))=(6.7+/-0.4+/-0.5+/-0.4)%, where the third error is due to the uncertainty in B(D+-->K-pi(+)pi(+)).

  9. Error trends in SASS winds as functions of atmospheric stability and sea surface temperature

    NASA Technical Reports Server (NTRS)

    Liu, W. T.

    1983-01-01

    Wind speed measurements obtained with the scatterometer instrument aboard the Seasat satellite are compared equivalent neutral wind measurements obtained from ship reports in the western N. Atlantic and eastern N. Pacific where the concentration of ship reports are high and the ranges of atmospheric stability and sea surface temperature are large. It is found that at low wind speeds the difference between satellite measurements and surface reports depends on sea surface temperature. At wind speeds higher than 8 m/s the dependence was greatly reduced. The removal of systematic errors due to fluctuations in atmospheric stability reduced the r.m.s. difference from 1.7 m/s to 0.8 m/s. It is suggested that further clarification of the effects of fluctuations in atmospheric stability on Seasat wind speed measurements should increase their reliability in the future.

  10. Extracting latent brain states--Towards true labels in cognitive neuroscience experiments.

    PubMed

    Porbadnigk, Anne K; Görnitz, Nico; Sannelli, Claudia; Binder, Alexander; Braun, Mikio; Kloft, Marius; Müller, Klaus-Robert

    2015-10-15

    Neuroscientific data is typically analyzed based on the behavioral response of the participant. However, the errors made may or may not be in line with the neural processing. In particular in experiments with time pressure or studies where the threshold of perception is measured, the error distribution deviates from uniformity due to the structure in the underlying experimental set-up. When we base our analysis on the behavioral labels as usually done, then we ignore this problem of systematic and structured (non-uniform) label noise and are likely to arrive at wrong conclusions in our data analysis. This paper contributes a remedy to this important scenario: we present a novel approach for a) measuring label noise and b) removing structured label noise. We demonstrate its usefulness for EEG data analysis using a standard d2 test for visual attention (N=20 participants). Copyright © 2015 Elsevier Inc. All rights reserved.

  11. VLBI height corrections due to gravitational deformation of antenna structures

    NASA Astrophysics Data System (ADS)

    Sarti, P.; Negusini, M.; Abbondanza, C.; Petrov, L.

    2009-12-01

    From an analysis of regional European VLBI data we evaluate the impact of a VLBI signal path correction model developed to account for gravitational deformations of the antenna structures. The model was derived from a combination of terrestrial surveying methods applied to telescopes at Medicina and Noto in Italy. We find that the model corrections shift the derived height components of these VLBI telescopes' reference points downward by 14.5 and 12.2 mm, respectively. No other parameter estimates nor other station positions are affected. Such systematic height errors are much larger than the formal VLBI random errors and imply the possibility of significant VLBI frame scale distortions, of major concern for the International Terrestrial Reference Frame (ITRF) and its applications. This demonstrates the urgent need to investigate gravitational deformations in other VLBI telescopes and eventually correct them in routine data analysis.

  12. Data multiplexing in radio interferometric calibration

    NASA Astrophysics Data System (ADS)

    Yatawatta, Sarod; Diblen, Faruk; Spreeuw, Hanno; Koopmans, L. V. E.

    2018-03-01

    New and upcoming radio interferometers will produce unprecedented amount of data that demand extremely powerful computers for processing. This is a limiting factor due to the large computational power and energy costs involved. Such limitations restrict several key data processing steps in radio interferometry. One such step is calibration where systematic errors in the data are determined and corrected. Accurate calibration is an essential component in reaching many scientific goals in radio astronomy and the use of consensus optimization that exploits the continuity of systematic errors across frequency significantly improves calibration accuracy. In order to reach full consensus, data at all frequencies need to be calibrated simultaneously. In the SKA regime, this can become intractable if the available compute agents do not have the resources to process data from all frequency channels simultaneously. In this paper, we propose a multiplexing scheme that is based on the alternating direction method of multipliers with cyclic updates. With this scheme, it is possible to simultaneously calibrate the full data set using far fewer compute agents than the number of frequencies at which data are available. We give simulation results to show the feasibility of the proposed multiplexing scheme in simultaneously calibrating a full data set when a limited number of compute agents are available.

  13. Stochastic differential equations in NONMEM: implementation, application, and comparison with ordinary differential equations.

    PubMed

    Tornøe, Christoffer W; Overgaard, Rune V; Agersø, Henrik; Nielsen, Henrik A; Madsen, Henrik; Jonsson, E Niclas

    2005-08-01

    The objective of the present analysis was to explore the use of stochastic differential equations (SDEs) in population pharmacokinetic/pharmacodynamic (PK/PD) modeling. The intra-individual variability in nonlinear mixed-effects models based on SDEs is decomposed into two types of noise: a measurement and a system noise term. The measurement noise represents uncorrelated error due to, for example, assay error while the system noise accounts for structural misspecifications, approximations of the dynamical model, and true random physiological fluctuations. Since the system noise accounts for model misspecifications, the SDEs provide a diagnostic tool for model appropriateness. The focus of the article is on the implementation of the Extended Kalman Filter (EKF) in NONMEM for parameter estimation in SDE models. Various applications of SDEs in population PK/PD modeling are illustrated through a systematic model development example using clinical PK data of the gonadotropin releasing hormone (GnRH) antagonist degarelix. The dynamic noise estimates were used to track variations in model parameters and systematically build an absorption model for subcutaneously administered degarelix. The EKF-based algorithm was successfully implemented in NONMEM for parameter estimation in population PK/PD models described by systems of SDEs. The example indicated that it was possible to pinpoint structural model deficiencies, and that valuable information may be obtained by tracking unexplained variations in parameters.

  14. SYSTEMATIC EFFECTS IN POLARIZING FOURIER TRANSFORM SPECTROMETERS FOR COSMIC MICROWAVE BACKGROUND OBSERVATIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nagler, Peter C.; Tucker, Gregory S.; Fixsen, Dale J.

    The detection of the primordial B-mode polarization signal of the cosmic microwave background (CMB) would provide evidence for inflation. Yet as has become increasingly clear, the detection of a such a faint signal requires an instrument with both wide frequency coverage to reject foregrounds and excellent control over instrumental systematic effects. Using a polarizing Fourier transform spectrometer (FTS) for CMB observations meets both of these requirements. In this work, we present an analysis of instrumental systematic effects in polarizing FTSs, using the Primordial Inflation Explorer (PIXIE) as a worked example. We analytically solve for the most important systematic effects inherentmore » to the FTS—emissive optical components, misaligned optical components, sampling and phase errors, and spin synchronous effects—and demonstrate that residual systematic error terms after corrections will all be at the sub-nK level, well below the predicted 100 nK B-mode signal.« less

  15. Integration of multitemporal and multisource data using point cloud based methods to quantify landscape change at the Mill Gulch earthflow, California

    NASA Astrophysics Data System (ADS)

    DeLong, S. B.; Avdievitch, N. N.

    2014-12-01

    As high-resolution topographic data become increasingly available, comparison of multitemporal and disparate datasets (e.g. airborne and terrestrial lidar) enable high-accuracy quantification of landscape change and detailed mapping of surface processes. However, if these data are not properly managed and aligned with maximum precision, results may be spurious. Often this is due to slight differences in coordinate systems that require complex geographic transformations and systematic error that is difficult to diagnose and correct. Here we present an analysis of four airborne and three terrestrial lidar datasets collected between 2003 and 2014 that we use to quantify change at an active earthflow in Mill Gulch, Sonoma County, California. We first identify and address systematic error internal to each dataset, such as registration offset between flight lines or scan positions. We then use a variant of an iterative closest point (ICP) algorithm to align point cloud data by maximizing use of stable portions of the landscape with minimal internal error. Using products derived from the aligned point clouds, we make our geomorphic analyses. These methods may be especially useful for change detection analyses in which accurate georeferencing is unavailable, as is often the case with some terrestrial lidar or "structure from motion" data. Our results show that the Mill Gulch earthflow has been active throughout the study period. We see continuous downslope flow, ongoing incorporation of new hillslope material into the flow, sediment loss from hillslopes, episodic fluvial erosion of the earthflow toe, and an indication of increased activity during periods of high precipitation.

  16. Construction of the Second Quito Astrolabe Catalogue

    NASA Astrophysics Data System (ADS)

    Kolesnik, Y. B.

    1994-03-01

    A method for astrolabe catalogue construction is presented. It is based on classical concepts, but the model of conditional equations for the group reduction is modified, additional parameters being introduced in the step- wise regressions. The chain adjustment is neglected, and the advantages of this approach are discussed. The method has been applied to the data obtained with the astrolabe of the Quito Astronomical Observatory from 1964 to 1983. Various characteristics of the catalogue produced with this method are compared with those due to the rigorous classical method. Some improvement both in systematic and random errors is outlined.

  17. Three-dimensional assessment of facial asymmetry: A systematic review.

    PubMed

    Akhil, Gopi; Senthil Kumar, Kullampalayam Palanisamy; Raja, Subramani; Janardhanan, Kumaresan

    2015-08-01

    For patients with facial asymmetry, complete and precise diagnosis, and surgical treatments to correct the underlying cause of the asymmetry are significant. Conventional diagnostic radiographs (submento-vertex projections, posteroanterior radiography) have limitations in asymmetry diagnosis due to two-dimensional assessments of three-dimensional (3D) images. The advent of 3D images has greatly reduced the magnification and projection errors that are common in conventional radiographs making it as a precise diagnostic aid for assessment of facial asymmetry. Thus, this article attempts to review the newly introduced 3D tools in the diagnosis of more complex facial asymmetries.

  18. Stereographic cloud heights from the imagery of two scan-synchronized geostationary satellites

    NASA Technical Reports Server (NTRS)

    Minzner, R. A.; Teagle, R. D.; Steranka, J.; Shenk, W. E.

    1979-01-01

    Scan synchronization of the sensors of two SMS-GOES satellites yields imagery from which cloud heights can be derived stereographically with a theoretical two-sigma random uncertainty of + or - 0.25 km for pairs of satellites separated by 60 degrees of longitude. Systematic height errors due to cloud motion can be kept below 100 m for all clouds with east-west components of speed below hurricane speed, provided the scan synchronization is within 40 seconds at the mid-point latitude, and the spin axis of each satellite is parallel to that of the earth.

  19. Why GPS makes distances bigger than they are

    PubMed Central

    Ranacher, Peter; Brunauer, Richard; Trutschnig, Wolfgang; Van der Spek, Stefan; Reich, Siegfried

    2016-01-01

    ABSTRACT Global navigation satellite systems such as the Global Positioning System (GPS) is one of the most important sensors for movement analysis. GPS is widely used to record the trajectories of vehicles, animals and human beings. However, all GPS movement data are affected by both measurement and interpolation errors. In this article we show that measurement error causes a systematic bias in distances recorded with a GPS; the distance between two points recorded with a GPS is – on average – bigger than the true distance between these points. This systematic ‘overestimation of distance’ becomes relevant if the influence of interpolation error can be neglected, which in practice is the case for movement sampled at high frequencies. We provide a mathematical explanation of this phenomenon and illustrate that it functionally depends on the autocorrelation of GPS measurement error (C). We argue that C can be interpreted as a quality measure for movement data recorded with a GPS. If there is a strong autocorrelation between any two consecutive position estimates, they have very similar error. This error cancels out when average speed, distance or direction is calculated along the trajectory. Based on our theoretical findings we introduce a novel approach to determine C in real-world GPS movement data sampled at high frequencies. We apply our approach to pedestrian trajectories and car trajectories. We found that the measurement error in the data was strongly spatially and temporally autocorrelated and give a quality estimate of the data. Most importantly, our findings are not limited to GPS alone. The systematic bias and its implications are bound to occur in any movement data collected with absolute positioning if interpolation error can be neglected. PMID:27019610

  20. Distance error correction for time-of-flight cameras

    NASA Astrophysics Data System (ADS)

    Fuersattel, Peter; Schaller, Christian; Maier, Andreas; Riess, Christian

    2017-06-01

    The measurement accuracy of time-of-flight cameras is limited due to properties of the scene and systematic errors. These errors can accumulate to multiple centimeters which may limit the applicability of these range sensors. In the past, different approaches have been proposed for improving the accuracy of these cameras. In this work, we propose a new method that improves two important aspects of the range calibration. First, we propose a new checkerboard which is augmented by a gray-level gradient. With this addition it becomes possible to capture the calibration features for intrinsic and distance calibration at the same time. The gradient strip allows to acquire a large amount of distance measurements for different surface reflectivities, which results in more meaningful training data. Second, we present multiple new features which are used as input to a random forest regressor. By using random regression forests, we circumvent the problem of finding an accurate model for the measurement error. During application, a correction value for each individual pixel is estimated with the trained forest based on a specifically tailored feature vector. With our approach the measurement error can be reduced by more than 40% for the Mesa SR4000 and by more than 30% for the Microsoft Kinect V2. In our evaluation we also investigate the impact of the individual forest parameters and illustrate the importance of the individual features.

  1. Peak-locking centroid bias in Shack-Hartmann wavefront sensing

    NASA Astrophysics Data System (ADS)

    Anugu, Narsireddy; Garcia, Paulo J. V.; Correia, Carlos M.

    2018-05-01

    Shack-Hartmann wavefront sensing relies on accurate spot centre measurement. Several algorithms were developed with this aim, mostly focused on precision, i.e. minimizing random errors. In the solar and extended scene community, the importance of the accuracy (bias error due to peak-locking, quantization, or sampling) of the centroid determination was identified and solutions proposed. But these solutions only allow partial bias corrections. To date, no systematic study of the bias error was conducted. This article bridges the gap by quantifying the bias error for different correlation peak-finding algorithms and types of sub-aperture images and by proposing a practical solution to minimize its effects. Four classes of sub-aperture images (point source, elongated laser guide star, crowded field, and solar extended scene) together with five types of peak-finding algorithms (1D parabola, the centre of gravity, Gaussian, 2D quadratic polynomial, and pyramid) are considered, in a variety of signal-to-noise conditions. The best performing peak-finding algorithm depends on the sub-aperture image type, but none is satisfactory to both bias and random errors. A practical solution is proposed that relies on the antisymmetric response of the bias to the sub-pixel position of the true centre. The solution decreases the bias by a factor of ˜7 to values of ≲ 0.02 pix. The computational cost is typically twice of current cross-correlation algorithms.

  2. Asteroid thermal modeling in the presence of reflected sunlight

    NASA Astrophysics Data System (ADS)

    Myhrvold, Nathan

    2018-03-01

    A new derivation of simple asteroid thermal models is presented, investigating the need to account correctly for Kirchhoff's law of thermal radiation when IR observations contain substantial reflected sunlight. The framework applies to both the NEATM and related thermal models. A new parameterization of these models eliminates the dependence of thermal modeling on visible absolute magnitude H, which is not always available. Monte Carlo simulations are used to assess the potential impact of violating Kirchhoff's law on estimates of physical parameters such as diameter and IR albedo, with an emphasis on NEOWISE results. The NEOWISE papers use ten different models, applied to 12 different combinations of WISE data bands, in 47 different combinations. The most prevalent combinations are simulated and the accuracy of diameter estimates is found to be depend critically on the model and data band combination. In the best case of full thermal modeling of all four band the errors in an idealized model the 1σ (68.27%) confidence interval is -5% to +6%, but this combination is just 1.9% of NEOWISE results. Other combinations representing 42% of the NEOWISE results have about twice the CI at -10% to +12%, before accounting for errors due to irregular shape or other real world effects that are not simulated. The model and data band combinations found for the majority of NEOWISE results have much larger systematic and random errors. Kirchhoff's law violation by NEOWISE models leads to errors in estimation accuracy that are strongest for asteroids with W1, W2 band emissivity ɛ12 in both the lowest (0.605 ≤ɛ12 ≤ 0 . 780), and highest decile (0.969 ≤ɛ12 ≤ 0 . 988), corresponding to the highest and lowest deciles of near-IR albedo pIR. Systematic accuracy error between deciles ranges from a low of 5% to as much as 45%, and there are also differences in the random errors. Kirchhoff's law effects also produce large errors in NEOWISE estimates of pIR, particularly for high values. IR observations of asteroids in bands that have substantial reflected sunlight can largely avoid these problems by adopting the Kirchhoff law compliant modeling framework presented here, which is conceptually straightforward and comes without computational cost.

  3. Using Analysis Increments (AI) to Estimate and Correct Systematic Errors in the Global Forecast System (GFS) Online

    NASA Astrophysics Data System (ADS)

    Bhargava, K.; Kalnay, E.; Carton, J.; Yang, F.

    2017-12-01

    Systematic forecast errors, arising from model deficiencies, form a significant portion of the total forecast error in weather prediction models like the Global Forecast System (GFS). While much effort has been expended to improve models, substantial model error remains. The aim here is to (i) estimate the model deficiencies in the GFS that lead to systematic forecast errors, (ii) implement an online correction (i.e., within the model) scheme to correct GFS following the methodology of Danforth et al. [2007] and Danforth and Kalnay [2008, GRL]. Analysis Increments represent the corrections that new observations make on, in this case, the 6-hr forecast in the analysis cycle. Model bias corrections are estimated from the time average of the analysis increments divided by 6-hr, assuming that initial model errors grow linearly and first ignoring the impact of observation bias. During 2012-2016, seasonal means of the 6-hr model bias are generally robust despite changes in model resolution and data assimilation systems, and their broad continental scales explain their insensitivity to model resolution. The daily bias dominates the sub-monthly analysis increments and consists primarily of diurnal and semidiurnal components, also requiring a low dimensional correction. Analysis increments in 2015 and 2016 are reduced over oceans, which is attributed to improvements in the specification of the SSTs. These results encourage application of online correction, as suggested by Danforth and Kalnay, for mean, seasonal and diurnal and semidiurnal model biases in GFS to reduce both systematic and random errors. As the error growth in the short-term is still linear, estimated model bias corrections can be added as a forcing term in the model tendency equation to correct online. Preliminary experiments with GFS, correcting temperature and specific humidity online show reduction in model bias in 6-hr forecast. This approach can then be used to guide and optimize the design of sub-grid scale physical parameterizations, more accurate discretization of the model dynamics, boundary conditions, radiative transfer codes, and other potential model improvements which can then replace the empirical correction scheme. The analysis increments also provide guidance in testing new physical parameterizations.

  4. The impact of command signal power distribution, processing delays, and speed scaling on neurally-controlled devices.

    PubMed

    Marathe, A R; Taylor, D M

    2015-08-01

    Decoding algorithms for brain-machine interfacing (BMI) are typically only optimized to reduce the magnitude of decoding errors. Our goal was to systematically quantify how four characteristics of BMI command signals impact closed-loop performance: (1) error magnitude, (2) distribution of different frequency components in the decoding errors, (3) processing delays, and (4) command gain. To systematically evaluate these different command features and their interactions, we used a closed-loop BMI simulator where human subjects used their own wrist movements to command the motion of a cursor to targets on a computer screen. Random noise with three different power distributions and four different relative magnitudes was added to the ongoing cursor motion in real time to simulate imperfect decoding. These error characteristics were tested with four different visual feedback delays and two velocity gains. Participants had significantly more trouble correcting for errors with a larger proportion of low-frequency, slow-time-varying components than they did with jittery, higher-frequency errors, even when the error magnitudes were equivalent. When errors were present, a movement delay often increased the time needed to complete the movement by an order of magnitude more than the delay itself. Scaling down the overall speed of the velocity command can actually speed up target acquisition time when low-frequency errors and delays are present. This study is the first to systematically evaluate how the combination of these four key command signal features (including the relatively-unexplored error power distribution) and their interactions impact closed-loop performance independent of any specific decoding method. The equations we derive relating closed-loop movement performance to these command characteristics can provide guidance on how best to balance these different factors when designing BMI systems. The equations reported here also provide an efficient way to compare a diverse range of decoding options offline.

  5. The impact of command signal power distribution, processing delays, and speed scaling on neurally-controlled devices

    NASA Astrophysics Data System (ADS)

    Marathe, A. R.; Taylor, D. M.

    2015-08-01

    Objective. Decoding algorithms for brain-machine interfacing (BMI) are typically only optimized to reduce the magnitude of decoding errors. Our goal was to systematically quantify how four characteristics of BMI command signals impact closed-loop performance: (1) error magnitude, (2) distribution of different frequency components in the decoding errors, (3) processing delays, and (4) command gain. Approach. To systematically evaluate these different command features and their interactions, we used a closed-loop BMI simulator where human subjects used their own wrist movements to command the motion of a cursor to targets on a computer screen. Random noise with three different power distributions and four different relative magnitudes was added to the ongoing cursor motion in real time to simulate imperfect decoding. These error characteristics were tested with four different visual feedback delays and two velocity gains. Main results. Participants had significantly more trouble correcting for errors with a larger proportion of low-frequency, slow-time-varying components than they did with jittery, higher-frequency errors, even when the error magnitudes were equivalent. When errors were present, a movement delay often increased the time needed to complete the movement by an order of magnitude more than the delay itself. Scaling down the overall speed of the velocity command can actually speed up target acquisition time when low-frequency errors and delays are present. Significance. This study is the first to systematically evaluate how the combination of these four key command signal features (including the relatively-unexplored error power distribution) and their interactions impact closed-loop performance independent of any specific decoding method. The equations we derive relating closed-loop movement performance to these command characteristics can provide guidance on how best to balance these different factors when designing BMI systems. The equations reported here also provide an efficient way to compare a diverse range of decoding options offline.

  6. Measurement of D0-D0 mixing parameters in D0 --> Ks pi+ pi- decays.

    PubMed

    Zhang, L M; Zhang, Z P; Adachi, I; Aihara, H; Aulchenko, V; Aushev, T; Bakich, A M; Balagura, V; Barberio, E; Bay, A; Belous, K; Bitenc, U; Bondar, A; Bozek, A; Bracko, M; Brodzicka, J; Browder, T E; Chang, P; Chao, Y; Chen, A; Chen, K-F; Chen, W T; Cheon, B G; Chiang, C-C; Cho, I-S; Choi, Y; Choi, Y K; Dalseno, J; Danilov, M; Dash, M; Drutskoy, A; Eidelman, S; Epifanov, D; Fratina, S; Gabyshev, N; Gokhroo, G; Golob, B; Ha, H; Haba, J; Hara, T; Hastings, N C; Hayasaka, K; Hayashii, H; Hazumi, M; Heffernan, D; Hokuue, T; Hoshi, Y; Hou, W-S; Hsiung, Y B; Hyun, H J; Iijima, T; Ikado, K; Inami, K; Ishikawa, A; Ishino, H; Itoh, R; Iwasaki, M; Iwasaki, Y; Joshi, N J; Kah, D H; Kaji, H; Kajiwara, S; Kang, J H; Kawai, H; Kawasaki, T; Kichimi, H; Kim, H J; Kim, H O; Kim, S K; Kim, Y J; Kinoshita, K; Korpar, S; Krizan, P; Krokovny, P; Kumar, R; Kuo, C C; Kuzmin, A; Kwon, Y-J; Lee, J S; Lee, M J; Lee, S E; Lesiak, T; Li, J; Limosani, A; Lin, S-W; Liu, Y; Liventsev, D; Matsumoto, T; Matyja, A; McOnie, S; Medvedeva, T; Mitaroff, W; Miyake, H; Miyata, H; Miyazaki, Y; Mizuk, R; Nagasaka, Y; Nakamura, I; Nakano, E; Nakao, M; Natkaniec, Z; Nishida, S; Nitoh, O; Ogawa, S; Ohshima, T; Okuno, S; Olsen, S L; Onuki, Y; Ostrowicz, W; Ozaki, H; Pakhlov, P; Pakhlova, G; Park, C W; Park, H; Peak, L S; Pestotnik, R; Piilonen, L E; Poluektov, A; Sahoo, H; Sakai, Y; Schneider, O; Schümann, J; Schwanda, C; Schwartz, A J; Seidl, R; Senyo, K; Sevior, M E; Shapkin, M; Shibuya, H; Shinomiya, S; Shiu, J-G; Shwartz, B; Singh, J B; Sokolov, A; Somov, A; Soni, N; Stanic, S; Staric, M; Stoeck, H; Sumisawa, K; Sumiyoshi, T; Suzuki, S; Tajima, O; Takasaki, F; Tamai, K; Tamura, N; Tanaka, M; Taylor, G N; Teramoto, Y; Tian, X C; Tikhomirov, I; Tsuboyama, T; Uehara, S; Ueno, K; Uglov, T; Unno, Y; Uno, S; Urquijo, P; Usov, Y; Varner, G; Vervink, K; Villa, S; Vinokurova, A; Wang, C H; Wang, M-Z; Wang, P; Watanabe, Y; Won, E; Yabsley, B D; Yamaguchi, A; Yamashita, Y; Yamauchi, M; Yuan, C Z; Zhang, C C; Zhilich, V; Zupanc, A

    2007-09-28

    We report a measurement of D0-D(0) mixing parameters in D(0) --> K(s)(0) pi(+) pi(-) decays using a time-dependent Dalitz-plot analysis. We first assume CP conservation and subsequently allow for CP violation. The results are based on 540 fb(-1) of data accumulated with the Belle detector at the KEKB e(+)e(-) collider. Assuming negligible CP violation, we measure the mixing parameters x = (0.80 +/- 0.29(-0.07-0.14)(+0.09+0.10))% and y = (0.33+/-0.24(-0.12-0.08)(+0.08+0.06))%, where the errors are statistical, experimental systematic, and systematic due to the Dalitz decay model, respectively. Allowing for CP violation, we obtain the CP-violating parameters |q / p| = 0.86(-0.29-0.03)(+0.30+0.06) +/- 0.08 and arg(q/p) = (-14(-18-3-4)(+16+5+2)) degrees .

  7. Evidence Report: Risk of Performance Errors Due to Training Deficiencies

    NASA Technical Reports Server (NTRS)

    Barshi, Immanuel; Dempsey, Donna L.

    2016-01-01

    Substantial evidence supports the claim that inadequate training leads to performance errors. Barshi and Loukopoulos (2012) demonstrate that even a task as carefully developed and refined over many years as operating an aircraft can be significantly improved by a systematic analysis, followed by improved procedures and improved training (see also Loukopoulos, Dismukes, & Barshi, 2009a). Unfortunately, such a systematic analysis of training needs rarely occurs during the preliminary design phase, when modifications are most feasible. Training is often seen as a way to compensate for deficiencies in task and system design, which in turn increases the training load. As a result, task performance often suffers, and with it, the operators suffer and so does the mission. On the other hand, effective training can indeed compensate for such design deficiencies, and can even go beyond to compensate for failures of our imagination to anticipate all that might be needed when we send our crew members to go where no one else has gone before. Much of the research literature on training is motivated by current training practices aimed at current training needs. Although there is some experience with operations in extreme environments on Earth, there is no experience with long-duration space missions where crews must practice semi-autonomous operations, where ground support must accommodate significant communication delays, and where so little is known about the environment. Thus, we must develop robust methodologies and tools to prepare our crews for the unknown. The research necessary to support such an endeavor does not currently exist, but existing research does reveal general challenges that are relevant to long-duration, high-autonomy missions. The evidence presented here describes issues related to the risk of performance errors due to training deficiencies. Contributing factors regarding training deficiencies may pertain to organizational process and training programs for spaceflight, such as when training programs are inadequate or unavailable. Furthermore, failure to match between tasks on the one hand, and learning and memory abilities on the other hand is a contributing factor, especially when individuals' relative efficiency with which new information is acquired, and adjustments made in behavior or thinking, are inconsistent with mission demands. Thus, if training deficiencies are present, the likelihood of errors or of the inability to successfully complete a task increases. What's more, the overall risk to the crew, the vehicle, and the mission increases.

  8. The utility of point count surveys to predict wildlife interactions with wind energy facilities: An example focused on golden eagles

    USGS Publications Warehouse

    Sur, Maitreyi; Belthoff, James R.; Bjerre, Emily R.; Millsap, Brian A.; Katzner, Todd

    2018-01-01

    Wind energy development is rapidly expanding in North America, often accompanied by requirements to survey potential facility locations for existing wildlife. Within the USA, golden eagles (Aquila chrysaetos) are among the most high-profile species of birds that are at risk from wind turbines. To minimize golden eagle fatalities in areas proposed for wind development, modified point count surveys are usually conducted to estimate use by these birds. However, it is not always clear what drives variation in the relationship between on-site point count data and actual use by eagles of a wind energy project footprint. We used existing GPS-GSM telemetry data, collected at 15 min intervals from 13 golden eagles in 2012 and 2013, to explore the relationship between point count data and eagle use of an entire project footprint. To do this, we overlaid the telemetry data on hypothetical project footprints and simulated a variety of point count sampling strategies for those footprints. We compared the time an eagle was found in the sample plots with the time it was found in the project footprint using a metric we called “error due to sampling”. Error due to sampling for individual eagles appeared to be influenced by interactions between the size of the project footprint (20, 40, 90 or 180 km2) and the sampling type (random, systematic or stratified) and was greatest on 90 km2 plots. However, use of random sampling resulted in lowest error due to sampling within intermediate sized plots. In addition sampling intensity and sampling frequency both influenced the effectiveness of point count sampling. Although our work focuses on individual eagles (not the eagle populations typically surveyed in the field), our analysis shows both the utility of simulations to identify specific influences on error and also potential improvements to sampling that consider the context-specific manner that point counts are laid out on the landscape.

  9. The Observational Determination of the Primordial Helium Abundance: a Y2K Status Report

    NASA Astrophysics Data System (ADS)

    Skillman, Evan D.

    I review observational progress and assess the current state of the determination of the primordial helium abundance, Yp. At present there are two determinations with non-overlapping errors. My impression is that the errors have been under-estimated in both studies. I review recent work on errors assessment and give suggestions for decreasing systematic errors in future studies.

  10. Improved Quality in Aerospace Testing Through the Modern Design of Experiments

    NASA Technical Reports Server (NTRS)

    DeLoach, R.

    2000-01-01

    This paper illustrates how, in the presence of systematic error, the quality of an experimental result can be influenced by the order in which the independent variables are set. It is suggested that in typical experimental circumstances in which systematic errors are significant, the common practice of organizing the set point order of independent variables to maximize data acquisition rate results in a test matrix that fails to produce the highest quality research result. With some care to match the volume of data required to satisfy inference error risk tolerances, it is possible to accept a lower rate of data acquisition and still produce results of higher technical quality (lower experimental error) with less cost and in less time than conventional test procedures, simply by optimizing the sequence in which independent variable levels are set.

  11. Detecting Spatial Patterns in Biological Array Experiments

    PubMed Central

    ROOT, DAVID E.; KELLEY, BRIAN P.; STOCKWELL, BRENT R.

    2005-01-01

    Chemical genetic screening and DNA and protein microarrays are among a number of increasingly important and widely used biological research tools that involve large numbers of parallel experiments arranged in a spatial array. It is often difficult to ensure that uniform experimental conditions are present throughout the entire array, and as a result, one often observes systematic spatially correlated errors, especially when array experiments are performed using robots. Here, the authors apply techniques based on the discrete Fourier transform to identify and quantify spatially correlated errors superimposed on a spatially random background. They demonstrate that these techniques are effective in identifying common spatially systematic errors in high-throughput 384-well microplate assay data. In addition, the authors employ a statistical test to allow for automatic detection of such errors. Software tools for using this approach are provided. PMID:14567791

  12. Evaluation and Comparison of the Processing Methods of Airborne Gravimetry Concerning the Errors Effects on Downward Continuation Results: Case Studies in Louisiana (USA) and the Tibetan Plateau (China).

    PubMed

    Zhao, Qilong; Strykowski, Gabriel; Li, Jiancheng; Pan, Xiong; Xu, Xinyu

    2017-05-25

    Gravity data gaps in mountainous areas are nowadays often filled in with the data from airborne gravity surveys. Because of the errors caused by the airborne gravimeter sensors, and because of rough flight conditions, such errors cannot be completely eliminated. The precision of the gravity disturbances generated by the airborne gravimetry is around 3-5 mgal. A major obstacle in using airborne gravimetry are the errors caused by the downward continuation. In order to improve the results the external high-accuracy gravity information e.g., from the surface data can be used for high frequency correction, while satellite information can be applying for low frequency correction. Surface data may be used to reduce the systematic errors, while regularization methods can reduce the random errors in downward continuation. Airborne gravity surveys are sometimes conducted in mountainous areas and the most extreme area of the world for this type of survey is the Tibetan Plateau. Since there are no high-accuracy surface gravity data available for this area, the above error minimization method involving the external gravity data cannot be used. We propose a semi-parametric downward continuation method in combination with regularization to suppress the systematic error effect and the random error effect in the Tibetan Plateau; i.e., without the use of the external high-accuracy gravity data. We use a Louisiana airborne gravity dataset from the USA National Oceanic and Atmospheric Administration (NOAA) to demonstrate that the new method works effectively. Furthermore, and for the Tibetan Plateau we show that the numerical experiment is also successfully conducted using the synthetic Earth Gravitational Model 2008 (EGM08)-derived gravity data contaminated with the synthetic errors. The estimated systematic errors generated by the method are close to the simulated values. In addition, we study the relationship between the downward continuation altitudes and the error effect. The analysis results show that the proposed semi-parametric method combined with regularization is efficient to address such modelling problems.

  13. Evaluation and Comparison of the Processing Methods of Airborne Gravimetry Concerning the Errors Effects on Downward Continuation Results: Case Studies in Louisiana (USA) and the Tibetan Plateau (China)

    PubMed Central

    Zhao, Qilong; Strykowski, Gabriel; Li, Jiancheng; Pan, Xiong; Xu, Xinyu

    2017-01-01

    Gravity data gaps in mountainous areas are nowadays often filled in with the data from airborne gravity surveys. Because of the errors caused by the airborne gravimeter sensors, and because of rough flight conditions, such errors cannot be completely eliminated. The precision of the gravity disturbances generated by the airborne gravimetry is around 3–5 mgal. A major obstacle in using airborne gravimetry are the errors caused by the downward continuation. In order to improve the results the external high-accuracy gravity information e.g., from the surface data can be used for high frequency correction, while satellite information can be applying for low frequency correction. Surface data may be used to reduce the systematic errors, while regularization methods can reduce the random errors in downward continuation. Airborne gravity surveys are sometimes conducted in mountainous areas and the most extreme area of the world for this type of survey is the Tibetan Plateau. Since there are no high-accuracy surface gravity data available for this area, the above error minimization method involving the external gravity data cannot be used. We propose a semi-parametric downward continuation method in combination with regularization to suppress the systematic error effect and the random error effect in the Tibetan Plateau; i.e., without the use of the external high-accuracy gravity data. We use a Louisiana airborne gravity dataset from the USA National Oceanic and Atmospheric Administration (NOAA) to demonstrate that the new method works effectively. Furthermore, and for the Tibetan Plateau we show that the numerical experiment is also successfully conducted using the synthetic Earth Gravitational Model 2008 (EGM08)-derived gravity data contaminated with the synthetic errors. The estimated systematic errors generated by the method are close to the simulated values. In addition, we study the relationship between the downward continuation altitudes and the error effect. The analysis results show that the proposed semi-parametric method combined with regularization is efficient to address such modelling problems. PMID:28587086

  14. Evaluation and Comparison of the Processing Methods of Airborne Gravimetry Concerning the Errors Effects on Downward Continuation Results: Case Studies in Louisiana (USA) and the Tibetan Plateau (China)

    NASA Astrophysics Data System (ADS)

    Zhao, Q.

    2017-12-01

    Gravity data gaps in mountainous areas are nowadays often filled in with the data from airborne gravity surveys. Because of the errors caused by the airborne gravimeter sensors, and because of rough flight conditions, such errors cannot be completely eliminated. The precision of the gravity disturbances generated by the airborne gravimetry is around 3-5 mgal. A major obstacle in using airborne gravimetry are the errors caused by the downward continuation. In order to improve the results the external high-accuracy gravity information e.g., from the surface data can be used for high frequency correction, while satellite information can be applying for low frequency correction. Surface data may be used to reduce the systematic errors, while regularization methods can reduce the random errors in downward continuation. Airborne gravity surveys are sometimes conducted in mountainous areas and the most extreme area of the world for this type of survey is the Tibetan Plateau. Since there are no high-accuracy surface gravity data available for this area, the above error minimization method involving the external gravity data cannot be used. We propose a semi-parametric downward continuation method in combination with regularization to suppress the systematic error effect and the random error effect in the Tibetan Plateau; i.e., without the use of the external high-accuracy gravity data. We use a Louisiana airborne gravity dataset from the USA National Oceanic and Atmospheric Administration (NOAA) to demonstrate that the new method works effectively. Furthermore, and for the Tibetan Plateau we show that the numerical experiment is also successfully conducted using the synthetic Earth Gravitational Model 2008 (EGM08)-derived gravity data contaminated with the synthetic errors. The estimated systematic errors generated by the method are close to the simulated values. In addition, we study the relationship between the downward continuation altitudes and the error effect. The analysis results show that the proposed semi-parametric method combined with regularization is efficient to address such modelling problems.

  15. Flow tilt angles near forest edges - Part 2: Lidar anemometry

    NASA Astrophysics Data System (ADS)

    Dellwik, E.; Mann, J.; Bingöl, F.

    2010-05-01

    A novel way of estimating near-surface mean flow tilt angles from ground based Doppler lidar measurements is presented. The results are compared with traditional mast based in-situ sonic anemometry. The tilt angle assessed with the lidar is based on 10 or 30 min mean values of the velocity field from a conically scanning lidar. In this mode of measurement, the lidar beam is rotated in a circle by a prism with a fixed angle to the vertical at varying focus distances. By fitting a trigonometric function to the scans, the mean vertical velocity can be estimated. Lidar measurements from (1) a fetch-limited beech forest site taken at 48-175 m a.g.l. (above ground level), (2) a reference site in flat agricultural terrain and (3) a second reference site in complex terrain are presented. The method to derive flow tilt angles and mean vertical velocities from lidar has several advantages compared to sonic anemometry; there is no flow distortion caused by the instrument itself, there are no temperature effects and the instrument misalignment can be corrected for by assuming zero tilt angle at high altitudes. Contrary to mast-based instruments, the lidar measures the wind field with the exact same alignment error at a multitude of heights. Disadvantages with estimating vertical velocities from a lidar compared to mast-based measurements are potentially slightly increased levels of statistical errors due to limited sampling time, because the sampling is disjunct, and a requirement for homogeneous flow. The estimated mean vertical velocity is biased if the flow over the scanned circle is not homogeneous. It is demonstrated that the error on the mean vertical velocity due to flow inhomogeneity can be approximated by a function of the angle of the lidar beam to the vertical and the vertical gradient of the mean vertical velocity, whereas the error due to flow inhomogeneity on the horizontal mean wind speed is independent of the lidar beam angle. For the presented measurements over forest, it is evaluated that the systematic error due to the inhomogeneity of the flow is less than 0.2°. The results of the vertical conical scans were promising, and yielded positive flow angles for a sector where the forest is fetch-limited. However, more data and analysis are needed for a complete evaluation of the lidar technique.

  16. Correcting for deformation in skin-based marker systems.

    PubMed

    Alexander, E J; Andriacchi, T P

    2001-03-01

    A new technique is described that reduces error due to skin movement artifact in the opto-electronic measurement of in vivo skeletal motion. This work builds on a previously described point cluster technique marker set and estimation algorithm by extending the transformation equations to the general deformation case using a set of activity-dependent deformation models. Skin deformation during activities of daily living are modeled as consisting of a functional form defined over the observation interval (the deformation model) plus additive noise (modeling error). The method is described as an interval deformation technique. The method was tested using simulation trials with systematic and random components of deformation error introduced into marker position vectors. The technique was found to substantially outperform methods that require rigid-body assumptions. The method was tested in vivo on a patient fitted with an external fixation device (Ilizarov). Simultaneous measurements from markers placed on the Ilizarov device (fixed to bone) were compared to measurements derived from skin-based markers. The interval deformation technique reduced the errors in limb segment pose estimate by 33 and 25% compared to the classic rigid-body technique for position and orientation, respectively. This newly developed method has demonstrated that by accounting for the changing shape of the limb segment, a substantial improvement in the estimates of in vivo skeletal movement can be achieved.

  17. Estimating Transient Water Storage from Hurricane Harvey Using GPS Observations of Vertical Land Motion

    NASA Astrophysics Data System (ADS)

    Milliner, C. W. D.; Materna, K.; Burgmann, R.; Fu, Y.; Bekaert, D. P.; Moore, A. W.; Adhikari, S.

    2017-12-01

    The Global Positioning System (GPS) measures elastic ground motions due to variations in terrestrial water mass. Such measurements have been used to successfully study variations of hydrological loading over monthly-to-yearly timescales; e.g., seasonal changes in water storage in California (Argus et al., 2014), 3-year drought of Western US (Borsa et al., 2014) and monthly water storage change in the Pacific Northwest (Fu et al., 2015). However, inferring water storage variations from single loading events over daily-to-weekly timescales presents a major challenge, due to the relatively higher level of noise and systematic errors, such as common mode errors (CME). This makes geodetic investigations of transient hydrologic events, such as major hurricanes, particularly difficult. By using daily vertical GPS timeseries we resolve the spatial and temporal evolution of water loading from Hurricane Harvey across the Gulf coast by applying multiple network correction methods, which helps to isolate the hydrological loading signal. Using 340 GPS stations distributed across the southern US, we mitigate for the effects of spatially correlated CME by firstly removing vertical contributions from atmospheric and non-ocean tidal loading, and secondly correcting the residual positions for changes in translation, rotation and scaling using a Helmert transformation. Our results show a maximum subsidence of 1.8 cm occurring around Houston, and a clear migration of land subsidence from Corpus Christi to western Louisiana over a 7-day period, consistent with the movement of Harvey itself. We also present preliminary results using the Network Inversion Filter (Bekaert et al., 2016), in which we use a Kalman filter approach to describe the time-varying water mass in a stochastic sense. Although our results are preliminary, we find removal of systematic sources of noise can help reveal hydrological loading signals due to extreme, transient events, that would typically go missed by other spatially and temporally coarser methods (e.g., GRACE), providing valuable constraints on large and sudden changes to the hydrosphere.

  18. Calibration of the aerodynamic coefficient identification package measurements from the shuttle entry flights using inertial measurement unit data

    NASA Technical Reports Server (NTRS)

    Heck, M. L.; Findlay, J. T.; Compton, H. R.

    1983-01-01

    The Aerodynamic Coefficient Identification Package (ACIP) is an instrument consisting of body mounted linear accelerometers, rate gyros, and angular accelerometers for measuring the Space Shuttle vehicular dynamics. The high rate recorded data are utilized for postflight aerodynamic coefficient extraction studies. Although consistent with pre-mission accuracies specified by the manufacturer, the ACIP data were found to contain detectable levels of systematic error, primarily bias, as well as scale factor, static misalignment, and temperature dependent errors. This paper summarizes the technique whereby the systematic ACIP error sources were detected, identified, and calibrated with the use of recorded dynamic data from the low rate, highly accurate Inertial Measurement Units.

  19. Characterizing Satellite Rainfall Errors based on Land Use and Land Cover and Tracing Error Source in Hydrologic Model Simulation

    NASA Astrophysics Data System (ADS)

    Gebregiorgis, A. S.; Peters-Lidard, C. D.; Tian, Y.; Hossain, F.

    2011-12-01

    Hydrologic modeling has benefited from operational production of high resolution satellite rainfall products. The global coverage, near-real time availability, spatial and temporal sampling resolutions have advanced the application of physically based semi-distributed and distributed hydrologic models for wide range of environmental decision making processes. Despite these successes, the existence of uncertainties due to indirect way of satellite rainfall estimates and hydrologic models themselves remain a challenge in making meaningful and more evocative predictions. This study comprises breaking down of total satellite rainfall error into three independent components (hit bias, missed precipitation and false alarm), characterizing them as function of land use and land cover (LULC), and tracing back the source of simulated soil moisture and runoff error in physically based distributed hydrologic model. Here, we asked "on what way the three independent total bias components, hit bias, missed, and false precipitation, affect the estimation of soil moisture and runoff in physically based hydrologic models?" To understand the clear picture of the outlined question above, we implemented a systematic approach by characterizing and decomposing the total satellite rainfall error as a function of land use and land cover in Mississippi basin. This will help us to understand the major source of soil moisture and runoff errors in hydrologic model simulation and trace back the information to algorithm development and sensor type which ultimately helps to improve algorithms better and will improve application and data assimilation in future for GPM. For forest and woodland and human land use system, the soil moisture was mainly dictated by the total bias for 3B42-RT, CMORPH, and PERSIANN products. On the other side, runoff error was largely dominated by hit bias than the total bias. This difference occurred due to the presence of missed precipitation which is a major contributor to the total bias both during the summer and winter seasons. Missed precipitation, most likely light rain and rain over snow cover, has significant effect on soil moisture and are less capable of producing runoff that results runoff dependency on the hit bias only.

  20. Comparison of acoustic travel-time measurements of solar meridional circulation from SDO/HMI and SOHO/MDI

    NASA Astrophysics Data System (ADS)

    Liang, Zhi-Chao; Birch, Aaron C.; Duvall, Thomas L., Jr.; Gizon, Laurent; Schou, Jesper

    2017-05-01

    Context. Time-distance helioseismology is one of the primary tools for studying the solar meridional circulation, especially in the lower convection zone. However, travel-time measurements of the subsurface meridional flow suffer from a variety of systematic errors, such as a center-to-limb variation and an offset due to the position angle (P-angle) uncertainty of solar images. It has been suggested that the center-to-limb variation can be removed by subtracting east-west from south-north travel-time measurements. This ad hoc method for the removal of the center-to-limb effect has been adopted widely but not tested for travel distances corresponding to the lower convection zone. Aims: We explore the effects of two major sources of the systematic errors, the P-angle error arising from the instrumental misalignment and the center-to-limb variation, on the acoustic travel-time measurements in the south-north direction. Methods: We apply the time-distance technique to contemporaneous medium-degree Dopplergrams produced by SOHO/MDI and SDO/HMI to obtain the travel-time difference caused by meridional circulation throughout the solar convection zone. The P-angle offset in MDI images is measured by cross-correlating MDI and HMI images. The travel-time measurements in the south-north and east-west directions are averaged over the same observation period (May 2010 to Apr. 2011) for the two data sets and then compared to examine the consistency of MDI and HMI travel times after applying the above-mentioned corrections. Results: The offsets in the south-north travel-time difference from MDI data induced by the P-angle error gradually diminish with increasing travel distance. However, these offsets become noisy for travel distances corresponding to waves that reach the base of the convection zone. This suggests that a careful treatment of the P-angle problem is required when studying a deep meridional flow. After correcting the P-angle and the removal of the center-to-limb effect, the travel-time measurements from MDI and HMI are consistent within the error bars for meridional circulation covering the entire convection zone. The fluctuations observed in both data sets are highly correlated and thus indicate their solar origin rather than an instrumental origin. Although our results demonstrate that the ad hoc correction is capable of reducing the wide discrepancy in the travel-time measurements from MDI and HMI, we cannot exclude the possibility that there exist other systematic effects acting on the two data sets in the same way.

  1. Integrating Solar PV in Utility System Operations: Analytical Framework and Arizona Case Study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wu, Jing; Botterud, Audun; Mills, Andrew

    2015-06-01

    A systematic framework is proposed to estimate the impact on operating costs due to uncertainty and variability in renewable resources. The framework quantifies the integration costs associated with subhourly variability and uncertainty as well as day-ahead forecasting errors in solar PV (photovoltaics) power. A case study illustrates how changes in system operations may affect these costs for a utility in the southwestern United States (Arizona Public Service Company). We conduct an extensive sensitivity analysis under different assumptions about balancing reserves, system flexibility, fuel prices, and forecasting errors. We find that high solar PV penetrations may lead to operational challenges, particularlymore » during low-load and high solar periods. Increased system flexibility is essential for minimizing integration costs and maintaining reliability. In a set of sensitivity cases where such flexibility is provided, in part, by flexible operations of nuclear power plants, the estimated integration costs vary between $1.0 and $4.4/MWh-PV for a PV penetration level of 17%. The integration costs are primarily due to higher needs for hour-ahead balancing reserves to address the increased sub-hourly variability and uncertainty in the PV resource. (C) 2015 Elsevier Ltd. All rights reserved.« less

  2. Sodium Absorption from the Exoplanetary Atmosphere of HD 189733b Detected in the Optical Transmission Spectrum

    NASA Astrophysics Data System (ADS)

    Redfield, Seth; Endl, Michael; Cochran, William D.; Koesterke, Lars

    2008-01-01

    We present the first ground-based detection of sodium absorption in the transmission spectrum of an extrasolar planet. Absorption due to the atmosphere of the extrasolar planet HD 189733b is detected in both lines of the Na I doublet. High spectral resolution observations were taken of 11 transits with the High Resolution Spectrograph (HRS) on the 9.2 m Hobby-Eberly Telescope (HET). The Na I absorption in the transmission spectrum due to HD 189733b is (- 67.2 +/- 20.7) × 10-5 deeper in the "narrow" spectral band that encompasses both lines relative to adjacent bands. The 1 σ error includes both random and systematic errors, and the detection is >3 σ. This amount of relative absorption in Na I for HD 189733b is ~3 times larger than that detected for HD 209458b by Charbonneau et al. (2002) and indicates that these two hot Jupiters may have significantly different atmospheric properties. Based on observations obtained with the Hobby-Eberly Telescope, which is a joint project of the University of Texas at Austin, the Pennsylvania State University, Stanford University, Ludwig-Maximilians-Universität München, and Georg-August-Universität Göttingen.

  3. Single molecule counting and assessment of random molecular tagging errors with transposable giga-scale error-correcting barcodes.

    PubMed

    Lau, Billy T; Ji, Hanlee P

    2017-09-21

    RNA-Seq measures gene expression by counting sequence reads belonging to unique cDNA fragments. Molecular barcodes commonly in the form of random nucleotides were recently introduced to improve gene expression measures by detecting amplification duplicates, but are susceptible to errors generated during PCR and sequencing. This results in false positive counts, leading to inaccurate transcriptome quantification especially at low input and single-cell RNA amounts where the total number of molecules present is minuscule. To address this issue, we demonstrated the systematic identification of molecular species using transposable error-correcting barcodes that are exponentially expanded to tens of billions of unique labels. We experimentally showed random-mer molecular barcodes suffer from substantial and persistent errors that are difficult to resolve. To assess our method's performance, we applied it to the analysis of known reference RNA standards. By including an inline random-mer molecular barcode, we systematically characterized the presence of sequence errors in random-mer molecular barcodes. We observed that such errors are extensive and become more dominant at low input amounts. We described the first study to use transposable molecular barcodes and its use for studying random-mer molecular barcode errors. Extensive errors found in random-mer molecular barcodes may warrant the use of error correcting barcodes for transcriptome analysis as input amounts decrease.

  4. Optical System Error Analysis and Calibration Method of High-Accuracy Star Trackers

    PubMed Central

    Sun, Ting; Xing, Fei; You, Zheng

    2013-01-01

    The star tracker is a high-accuracy attitude measurement device widely used in spacecraft. Its performance depends largely on the precision of the optical system parameters. Therefore, the analysis of the optical system parameter errors and a precise calibration model are crucial to the accuracy of the star tracker. Research in this field is relatively lacking a systematic and universal analysis up to now. This paper proposes in detail an approach for the synthetic error analysis of the star tracker, without the complicated theoretical derivation. This approach can determine the error propagation relationship of the star tracker, and can build intuitively and systematically an error model. The analysis results can be used as a foundation and a guide for the optical design, calibration, and compensation of the star tracker. A calibration experiment is designed and conducted. Excellent calibration results are achieved based on the calibration model. To summarize, the error analysis approach and the calibration method are proved to be adequate and precise, and could provide an important guarantee for the design, manufacture, and measurement of high-accuracy star trackers. PMID:23567527

  5. Barcode medication administration work-arounds: a systematic review and implications for nurse executives.

    PubMed

    Voshall, Barbara; Piscotty, Ronald; Lawrence, Jeanette; Targosz, Mary

    2013-10-01

    Safe medication administration is necessary to ensure quality healthcare. Barcode medication administration systems were developed to reduce drug administration errors and the related costs and improve patient safety. Work-arounds created by nurses in the execution of the required processes can lead to unintended consequences, including errors. This article provides a systematic review of the literature associated with barcoded medication administration and work-arounds and suggests interventions that should be adopted by nurse executives to ensure medication safety.

  6. A constant altitude flight survey method for mapping atmospheric ambient pressures and systematic radar errors

    NASA Technical Reports Server (NTRS)

    Larson, T. J.; Ehernberger, L. J.

    1985-01-01

    The flight test technique described uses controlled survey runs to determine horizontal atmospheric pressure variations and systematic altitude errors that result from space positioning measurements. The survey data can be used not only for improved air data calibrations, but also for studies of atmospheric structure and space positioning accuracy performance. The examples presented cover a wide range of radar tracking conditions for both subsonic and supersonic flight to an altitude of 42,000 ft.

  7. Systematic errors in long baseline oscillation experiments

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Harris, Deborah A.; /Fermilab

    This article gives a brief overview of long baseline neutrino experiments and their goals, and then describes the different kinds of systematic errors that are encountered in these experiments. Particular attention is paid to the uncertainties that come about because of imperfect knowledge of neutrino cross sections and more generally how neutrinos interact in nuclei. Near detectors are planned for most of these experiments, and the extent to which certain uncertainties can be reduced by the presence of near detectors is also discussed.

  8. Bit Error Probability for Maximum Likelihood Decoding of Linear Block Codes

    NASA Technical Reports Server (NTRS)

    Lin, Shu; Fossorier, Marc P. C.; Rhee, Dojun

    1996-01-01

    In this paper, the bit error probability P(sub b) for maximum likelihood decoding of binary linear codes is investigated. The contribution of each information bit to P(sub b) is considered. For randomly generated codes, it is shown that the conventional approximation at high SNR P(sub b) is approximately equal to (d(sub H)/N)P(sub s), where P(sub s) represents the block error probability, holds for systematic encoding only. Also systematic encoding provides the minimum P(sub b) when the inverse mapping corresponding to the generator matrix of the code is used to retrieve the information sequence. The bit error performances corresponding to other generator matrix forms are also evaluated. Although derived for codes with a generator matrix randomly generated, these results are shown to provide good approximations for codes used in practice. Finally, for decoding methods which require a generator matrix with a particular structure such as trellis decoding or algebraic-based soft decision decoding, equivalent schemes that reduce the bit error probability are discussed.

  9. Systematic ionospheric electron density tilts (SITs) at mid-latitudes and their associated HF bearing errors

    NASA Astrophysics Data System (ADS)

    Tedd, B. L.; Strangeways, H. J.; Jones, T. B.

    1985-11-01

    Systematic ionospheric tilts (SITs) at midlatitudes and the diurnal variation of bearing error for different transmission paths are examined. An explanation of diurnal variations of bearing error based on the dependence of ionospheric tilt on solar zenith angle and plasma transport processes is presented. The effect of vertical ion drift and the momentum transfer of neutral winds is investigated. During the daytime the transmissions are low and photochemical processes control SITs; however, at night transmissions are at higher heights and spatial and temporal variations of plasma transport processes influence SITs. A HF ray tracing technique which uses a three-dimensional ionospheric model based on predictions to simulate SIT-induced bearing errors is described; poor correlation with experimental data is observed and the causes for this are studied. A second model based on measured vertical-sounder data is proposed. Model two is applicable for predicting bearing error for a range of transmission paths and correlates well with experimental data.

  10. Errors in measurements by ultrasonic thickness gauges caused by the variation in ultrasonic velocity in constructional steels and metal alloys

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kalinin, V.A.; Tarasenko, V.L.; Tselser, L.B.

    1988-09-01

    Numerical values of the variation in ultrasonic velocity in constructional metal alloys and the measurement errors related to them are systematized. The systematization is based on the measurement results of the group ultrasonic velocity made in the All-Union Scientific-Research Institute for Nondestructive Testing in 1983-1984 and also on the measurement results of the group velocity made by various authors. The variations in ultrasonic velocity were systematized for carbon, low-alloy, and medium-alloy constructional steels; high-alloy iron base alloys; nickel-base heat-resistant alloys; wrought aluminum constructional alloys; titanium alloys; and cast irons and copper alloys.

  11. High-accuracy self-calibration method for dual-axis rotation-modulating RLG-INS

    NASA Astrophysics Data System (ADS)

    Wei, Guo; Gao, Chunfeng; Wang, Qi; Wang, Qun; Long, Xingwu

    2017-05-01

    Inertial navigation system has been the core component of both military and civil navigation systems. Dual-axis rotation modulation can completely eliminate the inertial elements constant errors of the three axes to improve the system accuracy. But the error caused by the misalignment angles and the scale factor error cannot be eliminated through dual-axis rotation modulation. And discrete calibration method cannot fulfill requirements of high-accurate calibration of the mechanically dithered ring laser gyroscope navigation system with shock absorbers. This paper has analyzed the effect of calibration error during one modulated period and presented a new systematic self-calibration method for dual-axis rotation-modulating RLG-INS. Procedure for self-calibration of dual-axis rotation-modulating RLG-INS has been designed. The results of self-calibration simulation experiment proved that: this scheme can estimate all the errors in the calibration error model, the calibration precision of the inertial sensors scale factor error is less than 1ppm and the misalignment is less than 5″. These results have validated the systematic self-calibration method and proved its importance for accuracy improvement of dual -axis rotation inertial navigation system with mechanically dithered ring laser gyroscope.

  12. Investigation of the FK5 system in the equatorial zone. Application to the instrumental system of the Second Quito astrolabe catalogue.

    NASA Astrophysics Data System (ADS)

    Kolesnik, Y. B.

    1995-12-01

    15 catalogues produced in the 1980s and 12 catalogues made from 1960 to 1978 have been used to assess the consistency of the FK5 system with observations in the declination zone from -30deg to 30deg. Classical δ-dependent and α-dependent systematic differences (Cat-FK5) have been formed for individual instrumental systems of the catalogues. The weighted mean instrumental systems for two subsets of catalogues centred at the epochs 1970 and 1987 have been constructed. External systematic and random accuracy of the catalogues under analysis and errors of the mean instrumental systems for both selections of catalogues have been estimated and presented in tables. The individual systematic differences of the catalogues and the mean instrumental systems are shown in figures. Numerical values of the total systematic deviations for both mean instrumental systems are given in tables. The results of intercomparison are discussed to assess the actual systematic deviations of the FK5 at the respective epochs and its actual random accuracy. It has been found that the mutual consistency of individual instrumental systems of catalogues of 1980s with respect to zonal systematic differences in both right ascension and declination is significantly better when comparing with the earlier catalogues. Consistency of both catalogue subsets is comparable with respect to α-dependent systematic differences. It is shown that the claimed random errors of the FK5 positions and proper motions are rather realistic, while deviations of the FK5 right ascension and declination system in the equatorial zone for both mean epochs exceed expected ones from the formal considerations. Quick degradation of the FK5 system with time is detected in right ascension. The results in declination are recognized to be less reliable, due to larger inconsistency of the individual instrumental systems. The system of the Second Quito Astrolabe Catalogue (QAC 2) has been investigated by comparison with two subsets of catalogues. It shows rather good consistency with both mean instrumental systems. Some conspicuous local deviations are outlined and discussed. We conclude that the QAC 2 might successfully be used in the compilation of the future second general catalogue of astrolabes as a link between northern and southern astrolabe catalogues.

  13. Uncertainty estimates of a GRACE inversion modelling technique over Greenland using a simulation

    NASA Astrophysics Data System (ADS)

    Bonin, Jennifer; Chambers, Don

    2013-07-01

    The low spatial resolution of GRACE causes leakage, where signals in one location spread out into nearby regions. Because of this leakage, using simple techniques such as basin averages may result in an incorrect estimate of the true mass change in a region. A fairly simple least squares inversion technique can be used to more specifically localize mass changes into a pre-determined set of basins of uniform internal mass distribution. However, the accuracy of these higher resolution basin mass amplitudes has not been determined, nor is it known how the distribution of the chosen basins affects the results. We use a simple `truth' model over Greenland as an example case, to estimate the uncertainties of this inversion method and expose those design parameters which may result in an incorrect high-resolution mass distribution. We determine that an appropriate level of smoothing (300-400 km) and process noise (0.30 cm2 of water) gets the best results. The trends of the Greenland internal basins and Iceland can be reasonably estimated with this method, with average systematic errors of 3.5 cm yr-1 per basin. The largest mass losses found from GRACE RL04 occur in the coastal northwest (-19.9 and -33.0 cm yr-1) and southeast (-24.2 and -27.9 cm yr-1), with small mass gains (+1.4 to +7.7 cm yr-1) found across the northern interior. Acceleration of mass change is measurable at the 95 per cent confidence level in four northwestern basins, but not elsewhere in Greenland. Due to an insufficiently detailed distribution of basins across internal Canada, the trend estimates of Baffin and Ellesmere Islands are expected to be incorrect due to systematic errors caused by the inversion technique.

  14. The role of the basic state in the ENSO-monsoon relationship and implications for predictability

    NASA Astrophysics Data System (ADS)

    Turner, A. G.; Inness, P. M.; Slingo, J. M.

    2005-04-01

    The impact of systematic model errors on a coupled simulation of the Asian summer monsoon and its interannual variability is studied. Although the mean monsoon climate is reasonably well captured, systematic errors in the equatorial Pacific mean that the monsoon-ENSO teleconnection is rather poorly represented in the general-circulation model. A system of ocean-surface heat flux adjustments is implemented in the tropical Pacific and Indian Oceans in order to reduce the systematic biases. In this version of the general-circulation model, the monsoon-ENSO teleconnection is better simulated, particularly the lag-lead relationships in which weak monsoons precede the peak of El Niño. In part this is related to changes in the characteristics of El Niño, which has a more realistic evolution in its developing phase. A stronger ENSO amplitude in the new model version also feeds back to further strengthen the teleconnection. These results have important implications for the use of coupled models for seasonal prediction of systems such as the monsoon, and suggest that some form of flux correction may have significant benefits where model systematic error compromises important teleconnections and modes of interannual variability.

  15. A Bayesian Approach to Systematic Error Correction in Kepler Photometric Time Series

    NASA Astrophysics Data System (ADS)

    Jenkins, Jon Michael; VanCleve, J.; Twicken, J. D.; Smith, J. C.; Kepler Science Team

    2011-01-01

    In order for the Kepler mission to achieve its required 20 ppm photometric precision for 6.5 hr observations of 12th magnitude stars, the Presearch Data Conditioning (PDC) software component of the Kepler Science Processing Pipeline must reduce systematic errors in flux time series to the limit of stochastic noise for errors with time-scales less than three days, without smoothing or over-fitting away the transits that Kepler seeks. The current version of PDC co-trends against ancillary engineering data and Pipeline generated data using essentially a least squares (LS) approach. This approach is successful for quiet stars when all sources of systematic error have been identified. If the stars are intrinsically variable or some sources of systematic error are unknown, LS will nonetheless attempt to explain all of a given time series, not just the part the model can explain well. Negative consequences can include loss of astrophysically interesting signal, and injection of high-frequency noise into the result. As a remedy, we present a Bayesian Maximum A Posteriori (MAP) approach, in which a subset of intrinsically quiet and highly-correlated stars is used to establish the probability density function (PDF) of robust fit parameters in a diagonalized basis. The PDFs then determine a "reasonable” range for the fit parameters for all stars, and brake the runaway fitting that can distort signals and inject noise. We present a closed-form solution for Gaussian PDFs, and show examples using publically available Quarter 1 Kepler data. A companion poster (Van Cleve et al.) shows applications and discusses current work in more detail. Kepler was selected as the 10th mission of the Discovery Program. Funding for this mission is provided by NASA, Science Mission Directorate.

  16. Systematic error of the Gaia DR1 TGAS parallaxes from data for the red giant clump

    NASA Astrophysics Data System (ADS)

    Gontcharov, G. A.

    2017-08-01

    Based on the Gaia DR1 TGAS parallaxes and photometry from the Tycho-2, Gaia, 2MASS, andWISE catalogues, we have produced a sample of 100 000 clump red giants within 800 pc of the Sun. The systematic variations of the mode of their absolute magnitude as a function of the distance, magnitude, and other parameters have been analyzed. We show that these variations reach 0.7 mag and cannot be explained by variations in the interstellar extinction or intrinsic properties of stars and by selection. The only explanation seems to be a systematic error of the Gaia DR1 TGAS parallax dependent on the square of the observed distance in kpc: 0.18 R 2 mas. Allowance for this error reduces significantly the systematic dependences of the absolute magnitude mode on all parameters. This error reaches 0.1 mas within 800 pc of the Sun and allows an upper limit for the accuracy of the TGAS parallaxes to be estimated as 0.2 mas. A careful allowance for such errors is needed to use clump red giants as "standard candles." This eliminates all discrepancies between the theoretical and empirical estimates of the characteristics of these stars and allows us to obtain the first estimates of the modes of their absolute magnitudes from the Gaia parallaxes: mode( M H ) = -1.49 m ± 0.04 m , mode( M Ks ) = -1.63 m ± 0.03 m , mode( M W1) = -1.67 m ± 0.05 m mode( M W2) = -1.67 m ± 0.05 m , mode( M W3) = -1.66 m ± 0.02 m , mode( M W4) = -1.73 m ± 0.03 m , as well as the corresponding estimates of their de-reddened colors.

  17. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, Ting

    Over the last two decades, our understanding of the Milky Way has been improved thanks to large data sets arising from large-area digital sky surveys. The stellar halo is now known to be inhabited by a variety of spatial and kinematic stellar substructures, including stellar streams and stellar clouds, all of which are predicted by hierarchical Lambda Cold Dark Matter models of galaxy formation. In this dissertation, we first present the analysis of spectroscopic observations of individual stars from the two candidate structures discovered using an M-giant catalog from the Two Micron All-Sky Survey. The follow-up observations show that onemore » of the candidates is a genuine structure which might be associated with the Galactic Anticenter Stellar Structure, while the other one is a false detection due to the systematic photometric errors in the survey or dust extinction in low Galactic latitudes. We then presented the discovery of an excess of main sequence turn-off stars in the direction of the constellations of Eridanus and Phoenix from the first-year data of the Dark Energy Survey (DES) – a five-year, 5,000 deg2 optical imaging survey in the Southern Hemisphere. The Eridanus-Phoenix (EriPhe) overdensity is centered around l ~ 285° and b ~ -60° and the Poisson significance of the detection is at least 9σ. The EriPhe overdensity has a cloud-like morphology and the extent is at least ~ 4 kpc by ~ 3 kpc in projection, with a heliocentric distance of about d ~ 16 kpc. The EriPhe overdensity is morphologically similar to the previously-discovered Virgo overdensity and Hercules-Aquila cloud. These three overdensities lie along a polar plane separated by ~ 120° and may share a common origin. In addition to the scientific discoveries, we also present the work to improve the photometric calibration in DES using auxiliary calibration systems, since the photometric errors can cause false detection in first the halo substructure. We present a detailed description of the two auxiliary calibration systems built at Texas A&M University. We then discuss how the auxiliary systems in DES can be used to improve the photometric calibration of the systematic chromatic errors – source color-dependent systematic errors that are caused by variations in the wavelength dependence of the atmospheric transmission and the instrumental throughput.« less

  18. Effects of Systematic and Random Errors on the Retrieval of Particle Microphysical Properties from Multiwavelength Lidar Measurements Using Inversion with Regularization

    NASA Technical Reports Server (NTRS)

    Ramirez, Daniel Perez; Whiteman, David N.; Veselovskii, Igor; Kolgotin, Alexei; Korenskiy, Michael; Alados-Arboledas, Lucas

    2013-01-01

    In this work we study the effects of systematic and random errors on the inversion of multiwavelength (MW) lidar data using the well-known regularization technique to obtain vertically resolved aerosol microphysical properties. The software implementation used here was developed at the Physics Instrumentation Center (PIC) in Troitsk (Russia) in conjunction with the NASA/Goddard Space Flight Center. Its applicability to Raman lidar systems based on backscattering measurements at three wavelengths (355, 532 and 1064 nm) and extinction measurements at two wavelengths (355 and 532 nm) has been demonstrated widely. The systematic error sensitivity is quantified by first determining the retrieved parameters for a given set of optical input data consistent with three different sets of aerosol physical parameters. Then each optical input is perturbed by varying amounts and the inversion is repeated. Using bimodal aerosol size distributions, we find a generally linear dependence of the retrieved errors in the microphysical properties on the induced systematic errors in the optical data. For the retrievals of effective radius, number/surface/volume concentrations and fine-mode radius and volume, we find that these results are not significantly affected by the range of the constraints used in inversions. But significant sensitivity was found to the allowed range of the imaginary part of the particle refractive index. Our results also indicate that there exists an additive property for the deviations induced by the biases present in the individual optical data. This property permits the results here to be used to predict deviations in retrieved parameters when multiple input optical data are biased simultaneously as well as to study the influence of random errors on the retrievals. The above results are applied to questions regarding lidar design, in particular for the spaceborne multiwavelength lidar under consideration for the upcoming ACE mission.

  19. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, T. S.; DePoy, D. L.; Marshall, J. L.

    Here, we report that meeting the science goals for many current and future ground-based optical large-area sky surveys requires that the calibrated broadband photometry is both stable in time and uniform over the sky to 1% precision or better. Past and current surveys have achieved photometric precision of 1%–2% by calibrating the survey's stellar photometry with repeated measurements of a large number of stars observed in multiple epochs. The calibration techniques employed by these surveys only consider the relative frame-by-frame photometric zeropoint offset and the focal plane position-dependent illumination corrections, which are independent of the source color. However, variations inmore » the wavelength dependence of the atmospheric transmission and the instrumental throughput induce source color-dependent systematic errors. These systematic errors must also be considered to achieve the most precise photometric measurements. In this paper, we examine such systematic chromatic errors (SCEs) using photometry from the Dark Energy Survey (DES) as an example. We first define a natural magnitude system for DES and calculate the systematic errors on stellar magnitudes when the atmospheric transmission and instrumental throughput deviate from the natural system. We conclude that the SCEs caused by the change of airmass in each exposure, the change of the precipitable water vapor and aerosol in the atmosphere over time, and the non-uniformity of instrumental throughput over the focal plane can be up to 2% in some bandpasses. We then compare the calculated SCEs with the observed DES data. For the test sample data, we correct these errors using measurements of the atmospheric transmission and instrumental throughput from auxiliary calibration systems. In conclusion, the residual after correction is less than 0.3%. Moreover, we calculate such SCEs for Type Ia supernovae and elliptical galaxies and find that the chromatic errors for non-stellar objects are redshift-dependent and can be larger than those for stars at certain redshifts.« less

  20. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, T. S.; DePoy, D. L.; Marshall, J. L.

    Meeting the science goals for many current and future ground-based optical large-area sky surveys requires that the calibrated broadband photometry is both stable in time and uniform over the sky to 1% precision or better. Past and current surveys have achieved photometric precision of 1%–2% by calibrating the survey’s stellar photometry with repeated measurements of a large number of stars observed in multiple epochs. The calibration techniques employed by these surveys only consider the relative frame-by-frame photometric zeropoint offset and the focal plane position-dependent illumination corrections, which are independent of the source color. However, variations in the wavelength dependence ofmore » the atmospheric transmission and the instrumental throughput induce source color-dependent systematic errors. These systematic errors must also be considered to achieve the most precise photometric measurements. In this paper, we examine such systematic chromatic errors (SCEs) using photometry from the Dark Energy Survey (DES) as an example. We first define a natural magnitude system for DES and calculate the systematic errors on stellar magnitudes when the atmospheric transmission and instrumental throughput deviate from the natural system. We conclude that the SCEs caused by the change of airmass in each exposure, the change of the precipitable water vapor and aerosol in the atmosphere over time, and the non-uniformity of instrumental throughput over the focal plane can be up to 2% in some bandpasses. We then compare the calculated SCEs with the observed DES data. For the test sample data, we correct these errors using measurements of the atmospheric transmission and instrumental throughput from auxiliary calibration systems. The residual after correction is less than 0.3%. Moreover, we calculate such SCEs for Type Ia supernovae and elliptical galaxies and find that the chromatic errors for non-stellar objects are redshift-dependent and can be larger than those for stars at certain redshifts.« less

  1. Recalculation of regional and detailed gravity database from Slovak Republic and qualitative interpretation of new generation Bouguer anomaly map

    NASA Astrophysics Data System (ADS)

    Pasteka, Roman; Zahorec, Pavol; Mikuska, Jan; Szalaiova, Viktoria; Papco, Juraj; Krajnak, Martin; Kusnirak, David; Panisova, Jaroslava; Vajda, Peter; Bielik, Miroslav

    2014-05-01

    In this contribution results of the running project "Bouguer anomalies of new generation and the gravimetrical model of Western Carpathians (APVV-0194-10)" are presented. The existing homogenized regional database (212478 points) was enlarged by approximately 107 500 archive detailed gravity measurements. These added gravity values were measured since the year 1976 to the present, therefore they need to be unified and reprocessed. The improved positions of more than 8500 measured points were acquired by digitizing of archive maps (we recognized some local errors within particular data sets). Besides the local errors (due to the wrong positions, heights or gravity of measured points) we have found some areas of systematic errors probably due to the gravity measurement or processing errors. Some of them were confirmed and consequently corrected by field measurements within the frame of current project. Special attention is paid to the recalculation of the terrain corrections - we have used a new developed software as well as the latest version of digital terrain model of Slovakia DMR-3. Main improvement of the new terrain corrections evaluation algorithm is the possibility to calculate it in the real gravimeter position and involving of 3D polyhedral bodies approximation (accepting the spherical approximation of Earth's curvature). We have realized several tests by means of the introduction of non-standard distant relief effects introduction. A new complete Bouguer anomalies map was constructed and transformed by means of higher derivatives operators (tilt derivatives, TDX, theta-derivatives and the new TDXAS transformation), using the regularization approach. A new interesting regional lineament of probably neotectonic character was recognized in the new map of complete Bouguer anomalies and it was confirmed also by realized in-situ field measurements.

  2. Estimation of daily interfractional larynx residual setup error after isocentric alignment for head and neck radiotherapy: Quality-assurance implications for target volume and organ-at-risk margination using daily CT-on-rails imaging

    PubMed Central

    Baron, Charles A.; Awan, Musaddiq J.; Mohamed, Abdallah S. R.; Akel, Imad; Rosenthal, David I.; Gunn, G. Brandon; Garden, Adam S.; Dyer, Brandon A.; Court, Laurence; Sevak, Parag R; Kocak-Uzel, Esengul; Fuller, Clifton D.

    2016-01-01

    Larynx may alternatively serve as a target or organ-at-risk (OAR) in head and neck cancer (HNC) image-guided radiotherapy (IGRT). The objective of this study was to estimate IGRT parameters required for larynx positional error independent of isocentric alignment and suggest population–based compensatory margins. Ten HNC patients receiving radiotherapy (RT) with daily CT-on-rails imaging were assessed. Seven landmark points were placed on each daily scan. Taking the most superior anterior point of the C5 vertebra as a reference isocenter for each scan, residual displacement vectors to the other 6 points were calculated post-isocentric alignment. Subsequently, using the first scan as a reference, the magnitude of vector differences for all 6 points for all scans over the course of treatment were calculated. Residual systematic and random error, and the necessary compensatory CTV-to-PTV and OAR-to-PRV margins were calculated, using both observational cohort data and a bootstrap-resampled population estimator. The grand mean displacements for all anatomical points was 5.07mm, with mean systematic error of 1.1mm and mean random setup error of 2.63mm, while bootstrapped POIs grand mean displacement was 5.09mm, with mean systematic error of 1.23mm and mean random setup error of 2.61mm. Required margin for CTV-PTV expansion was 4.6mm for all cohort points, while the bootstrap estimator of the equivalent margin was 4.9mm. The calculated OAR-to-PRV expansion for the observed residual set-up error was 2.7mm, and bootstrap estimated expansion of 2.9mm. We conclude that the interfractional larynx setup error is a significant source of RT set-up/delivery error in HNC both when the larynx is considered as a CTV or OAR. We estimate the need for a uniform expansion of 5mm to compensate for set up error if the larynx is a target or 3mm if the larynx is an OAR when using a non-laryngeal bony isocenter. PMID:25679151

  3. Estimation of daily interfractional larynx residual setup error after isocentric alignment for head and neck radiotherapy: quality assurance implications for target volume and organs‐at‐risk margination using daily CT on‐rails imaging

    PubMed Central

    Baron, Charles A.; Awan, Musaddiq J.; Mohamed, Abdallah S.R.; Akel, Imad; Rosenthal, David I.; Gunn, G. Brandon; Garden, Adam S.; Dyer, Brandon A.; Court, Laurence; Sevak, Parag R.; Kocak‐Uzel, Esengul

    2014-01-01

    Larynx may alternatively serve as a target or organs at risk (OAR) in head and neck cancer (HNC) image‐guided radiotherapy (IGRT). The objective of this study was to estimate IGRT parameters required for larynx positional error independent of isocentric alignment and suggest population‐based compensatory margins. Ten HNC patients receiving radiotherapy (RT) with daily CT on‐rails imaging were assessed. Seven landmark points were placed on each daily scan. Taking the most superior‐anterior point of the C5 vertebra as a reference isocenter for each scan, residual displacement vectors to the other six points were calculated postisocentric alignment. Subsequently, using the first scan as a reference, the magnitude of vector differences for all six points for all scans over the course of treatment was calculated. Residual systematic and random error and the necessary compensatory CTV‐to‐PTV and OAR‐to‐PRV margins were calculated, using both observational cohort data and a bootstrap‐resampled population estimator. The grand mean displacements for all anatomical points was 5.07 mm, with mean systematic error of 1.1 mm and mean random setup error of 2.63 mm, while bootstrapped POIs grand mean displacement was 5.09 mm, with mean systematic error of 1.23 mm and mean random setup error of 2.61 mm. Required margin for CTV‐PTV expansion was 4.6 mm for all cohort points, while the bootstrap estimator of the equivalent margin was 4.9 mm. The calculated OAR‐to‐PRV expansion for the observed residual setup error was 2.7 mm and bootstrap estimated expansion of 2.9 mm. We conclude that the interfractional larynx setup error is a significant source of RT setup/delivery error in HNC, both when the larynx is considered as a CTV or OAR. We estimate the need for a uniform expansion of 5 mm to compensate for setup error if the larynx is a target, or 3 mm if the larynx is an OAR, when using a nonlaryngeal bony isocenter. PACS numbers: 87.55.D‐, 87.55.Qr

  4. Evaluation and Application of Satellite-Based Latent Heating Profile Estimation Methods

    NASA Technical Reports Server (NTRS)

    Olson, William S.; Grecu, Mircea; Yang, Song; Tao, Wei-Kuo

    2004-01-01

    In recent years, methods for estimating atmospheric latent heating vertical structure from both passive and active microwave remote sensing have matured to the point where quantitative evaluation of these methods is the next logical step. Two approaches for heating algorithm evaluation are proposed: First, application of heating algorithms to synthetic data, based upon cloud-resolving model simulations, can be used to test the internal consistency of heating estimates in the absence of systematic errors in physical assumptions. Second, comparisons of satellite-retrieved vertical heating structures to independent ground-based estimates, such as rawinsonde-derived analyses of heating, provide an additional test. The two approaches are complementary, since systematic errors in heating indicated by the second approach may be confirmed by the first. A passive microwave and combined passive/active microwave heating retrieval algorithm are evaluated using the described approaches. In general, the passive microwave algorithm heating profile estimates are subject to biases due to the limited vertical heating structure information contained in the passive microwave observations. These biases may be partly overcome by including more environment-specific a priori information into the algorithm s database of candidate solution profiles. The combined passive/active microwave algorithm utilizes the much higher-resolution vertical structure information provided by spaceborne radar data to produce less biased estimates; however, the global spatio-temporal sampling by spaceborne radar is limited. In the present study, the passive/active microwave algorithm is used to construct a more physically-consistent and environment-specific set of candidate solution profiles for the passive microwave algorithm and to help evaluate errors in the passive algorithm s heating estimates. Although satellite estimates of latent heating are based upon instantaneous, footprint- scale data, suppression of random errors requires averaging to at least half-degree resolution. Analysis of mesoscale and larger space-time scale phenomena based upon passive and passive/active microwave heating estimates from TRMM, SSMI, and AMSR data will be presented at the conference.

  5. Functional Independent Scaling Relation for ORR/OER Catalysts

    DOE PAGES

    Christensen, Rune; Hansen, Heine A.; Dickens, Colin F.; ...

    2016-10-11

    A widely used adsorption energy scaling relation between OH* and OOH* intermediates in the oxygen reduction reaction (ORR) and oxygen evolution reaction (OER), has previously been determined using density functional theory and shown to dictate a minimum thermodynamic overpotential for both reactions. Here, we show that the oxygen–oxygen bond in the OOH* intermediate is, however, not well described with the previously used class of exchange-correlation functionals. By quantifying and correcting the systematic error, an improved description of gaseous peroxide species versus experimental data and a reduction in calculational uncertainty is obtained. For adsorbates, we find that the systematic error largelymore » cancels the vdW interaction missing in the original determination of the scaling relation. An improved scaling relation, which is fully independent of the applied exchange–correlation functional, is obtained and found to differ by 0.1 eV from the original. Lastly, this largely confirms that, although obtained with a method suffering from systematic errors, the previously obtained scaling relation is applicable for predictions of catalytic activity.« less

  6. Testing the Reliability of Cluster Mass Indicators with a Systematics Limited Dataset

    NASA Technical Reports Server (NTRS)

    Juett, Adrienne M.; Davis, David S.; Mushotzky, Richard

    2009-01-01

    We present the mass X-ray observable scaling relationships for clusters of galaxies using the XMM-Newton cluster catalog of Snowden et al. Our results are roughly consistent with previous observational and theoretical work, with one major exception. We find 2-3 times the scatter around the best fit mass scaling relationships as expected from cluster simulations or seen in other observational studies. We suggest that this is a consequence of using hydrostatic mass, as opposed to virial mass, and is due to the explicit dependence of the hydrostatic mass on the gradients of the temperature and gas density profiles. We find a larger range of slope in the cluster temperature profiles at radii 500 than previous observational studies. Additionally, we find only a weak dependence of the gas mass fraction on cluster mass, consistent with a constant. Our average gas mass fraction results also argue for a closer study of the systematic errors due to instrumental calibration and modeling method variations between analyses. We suggest that a more careful study of the differences between various observational results and with cluster simulations is needed to understand sources of bias and scatter in cosmological studies of galaxy clusters.

  7. Prevalence of refractive errors in children in India: a systematic review.

    PubMed

    Sheeladevi, Sethu; Seelam, Bharani; Nukella, Phanindra B; Modi, Aditi; Ali, Rahul; Keay, Lisa

    2018-04-22

    Uncorrected refractive error is an avoidable cause of visual impairment which affects children in India. The objective of this review is to estimate the prevalence of refractive errors in children ≤ 15 years of age. The Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines were followed in this review. A detailed literature search was performed to include all population and school-based studies published from India between January 1990 and January 2017, using the Cochrane Library, Medline and Embase. The quality of the included studies was assessed based on a critical appraisal tool developed for systematic reviews of prevalence studies. Four population-based studies and eight school-based studies were included. The overall prevalence of refractive error per 100 children was 8.0 (CI: 7.4-8.1) and in schools it was 10.8 (CI: 10.5-11.2). The population-based prevalence of myopia, hyperopia (≥ +2.00 D) and astigmatism was 5.3 per cent, 4.0 per cent and 5.4 per cent, respectively. Combined refractive error and myopia alone were higher in urban areas compared to rural areas (odds ratio [OR]: 2.27 [CI: 2.09-2.45]) and (OR: 2.12 [CI: 1.79-2.50]), respectively. The prevalence of combined refractive errors and myopia alone in schools was higher among girls than boys (OR: 1.2 [CI: 1.1-1.3] and OR: 1.1 [CI: 1.1-1.2]), respectively. However, hyperopia was more prevalent among boys than girls in schools (OR: 2.1 [CI: 1.8-2.4]). Refractive error in children in India is a major public health problem and requires concerted efforts from various stakeholders including the health care workforce, education professionals and parents, to manage this issue. © 2018 Optometry Australia.

  8. Astrometric properties of the Tautenburg Plate Scanner

    NASA Astrophysics Data System (ADS)

    Brunzendorf, Jens; Meusinger, Helmut

    The Tautenburg Plate Scanner (TPS) is an advanced plate-measuring machine run by the Thüringer Landessternwarte Tautenburg (Karl Schwarzschild Observatory), where the machine is housed. It is capable of digitising photographic plates up to 30 cm × 30 cm in size. In our poster, we reported on tests and preliminary results of its astrometric properties. The essential components of the TPS consist of an x-y table movable between an illumination system and a direct imaging system. A telecentric lens images the light transmitted through the photographic emulsion onto a CCD line of 6000 pixels of 10 µm square size each. All components are mounted on a massive air-bearing table. Scanning is performed in lanes of up to 55 mm width by moving the x-y table in a continuous drift-scan mode perpendicular to the CCD line. The analogue output from the CCD is digitised to 12 bit with a total signal/noise ratio of 1000 : 1, corresponding to a photographic density range of three. The pixel map is produced as a series of optionally overlapping lane scans. The pixel data are stored onto CD-ROM or DAT. A Tautenburg Schmidt plate 24 cm × 24 cm in size is digitised within 2.5 hours resulting in 1.3 GB of data. Subsequent high-level data processing is performed off-line on other computers. During the scanning process, the geometry of the optical components is kept fixed. The optimal focussing of the optics is performed prior to the scan. Due to the telecentric lens refocussing is not required. Therefore, the main source of astrometric errors (beside the emulsion itself) are mechanical imperfections in the drive system, which have to be divided into random and systematic ones. The r.m.s. repeatability over the whole plate as measured by repeated scans of the same plate is about 0.5 µm for each axis. The mean plate-to-plate accuracy of the object positions on two plates with the same epoch and the same plate centre has been determined to be about 1 µm. This accuracy is comparable to results obtained with established measuring machines used for astrometric purposes and is mainly limited by the emulsion itself. The mechanical design of the x-y table introduces low-frequency systematic errors of up to 5 µm on both axes. Because of the high stability of the machine it is expected that these deviations from a perfectly uniform coordinate system will remain systematic on a long timescale. Such systematic errors can be corrected either directly once they have been determined or in the course of the general astrometric reduction process. The TPS is well suited for accurate relative measurements like proper motions on plates with the same scale and plate centre. The systematic errors of the x-y table can be determined by interferometric means, and there are plans for this in the next future.

  9. The Clinical Assessment in the Legal Field: An Empirical Study of Bias and Limitations in Forensic Expertise

    PubMed Central

    Iudici, Antonio; Salvini, Alessandro; Faccio, Elena; Castelnuovo, Gianluca

    2015-01-01

    According to the literature, psychological assessment in forensic contexts is one of the most controversial application areas for clinical psychology. This paper presents a review of systematic judgment errors in the forensic field. Forty-six psychological reports written by psychologists, court consultants, have been analyzed with content analysis to identify typical judgment errors related to the following areas: (a) distortions in the attribution of causality, (b) inferential errors, and (c) epistemological inconsistencies. Results indicated that systematic errors of judgment, usually referred also as “the man in the street,” are widely present in the forensic evaluations of specialist consultants. Clinical and practical implications are taken into account. This article could lead to significant benefits for clinical psychologists who want to deal with this sensitive issue and are interested in improving the quality of their contribution to the justice system. PMID:26648892

  10. Insights on the impact of systematic model errors on data assimilation performance in changing catchments

    NASA Astrophysics Data System (ADS)

    Pathiraja, S.; Anghileri, D.; Burlando, P.; Sharma, A.; Marshall, L.; Moradkhani, H.

    2018-03-01

    The global prevalence of rapid and extensive land use change necessitates hydrologic modelling methodologies capable of handling non-stationarity. This is particularly true in the context of Hydrologic Forecasting using Data Assimilation. Data Assimilation has been shown to dramatically improve forecast skill in hydrologic and meteorological applications, although such improvements are conditional on using bias-free observations and model simulations. A hydrologic model calibrated to a particular set of land cover conditions has the potential to produce biased simulations when the catchment is disturbed. This paper sheds new light on the impacts of bias or systematic errors in hydrologic data assimilation, in the context of forecasting in catchments with changing land surface conditions and a model calibrated to pre-change conditions. We posit that in such cases, the impact of systematic model errors on assimilation or forecast quality is dependent on the inherent prediction uncertainty that persists even in pre-change conditions. Through experiments on a range of catchments, we develop a conceptual relationship between total prediction uncertainty and the impacts of land cover changes on the hydrologic regime to demonstrate how forecast quality is affected when using state estimation Data Assimilation with no modifications to account for land cover changes. This work shows that systematic model errors as a result of changing or changed catchment conditions do not always necessitate adjustments to the modelling or assimilation methodology, for instance through re-calibration of the hydrologic model, time varying model parameters or revised offline/online bias estimation.

  11. Errors in Viking Lander Atmospheric Profiles Discovered Using MOLA Topography

    NASA Technical Reports Server (NTRS)

    Withers, Paul; Lorenz, R. D.; Neumann, G. A.

    2002-01-01

    Each Viking lander measured a topographic profile during entry. Comparing to MOLA (Mars Orbiter Laser Altimeter), we find a vertical error of 1-2 km in the Viking trajectory. This introduces a systematic error of 10-20% in the Viking densities and pressures at a given altitude. Additional information is contained in the original extended abstract.

  12. Systematic review of statistical approaches to quantify, or correct for, measurement error in a continuous exposure in nutritional epidemiology.

    PubMed

    Bennett, Derrick A; Landry, Denise; Little, Julian; Minelli, Cosetta

    2017-09-19

    Several statistical approaches have been proposed to assess and correct for exposure measurement error. We aimed to provide a critical overview of the most common approaches used in nutritional epidemiology. MEDLINE, EMBASE, BIOSIS and CINAHL were searched for reports published in English up to May 2016 in order to ascertain studies that described methods aimed to quantify and/or correct for measurement error for a continuous exposure in nutritional epidemiology using a calibration study. We identified 126 studies, 43 of which described statistical methods and 83 that applied any of these methods to a real dataset. The statistical approaches in the eligible studies were grouped into: a) approaches to quantify the relationship between different dietary assessment instruments and "true intake", which were mostly based on correlation analysis and the method of triads; b) approaches to adjust point and interval estimates of diet-disease associations for measurement error, mostly based on regression calibration analysis and its extensions. Two approaches (multiple imputation and moment reconstruction) were identified that can deal with differential measurement error. For regression calibration, the most common approach to correct for measurement error used in nutritional epidemiology, it is crucial to ensure that its assumptions and requirements are fully met. Analyses that investigate the impact of departures from the classical measurement error model on regression calibration estimates can be helpful to researchers in interpreting their findings. With regard to the possible use of alternative methods when regression calibration is not appropriate, the choice of method should depend on the measurement error model assumed, the availability of suitable calibration study data and the potential for bias due to violation of the classical measurement error model assumptions. On the basis of this review, we provide some practical advice for the use of methods to assess and adjust for measurement error in nutritional epidemiology.

  13. ArcticDEM Validation and Accuracy Assessment

    NASA Astrophysics Data System (ADS)

    Candela, S. G.; Howat, I.; Noh, M. J.; Porter, C. C.; Morin, P. J.

    2017-12-01

    ArcticDEM comprises a growing inventory Digital Elevation Models (DEMs) covering all land above 60°N. As of August, 2017, ArcticDEM had openly released 2-m resolution, individual DEM covering over 51 million km2, which includes areas of repeat coverage for change detection, as well as over 15 million km2 of 5-m resolution seamless mosaics. By the end of the project, over 80 million km2 of 2-m DEMs will be produced, averaging four repeats of the 20 million km2 Arctic landmass. ArcticDEM is produced from sub-meter resolution, stereoscopic imagery using open source software (SETSM) on the NCSA Blue Waters supercomputer. These DEMs have known biases of several meters due to errors in the sensor models generated from satellite positioning. These systematic errors are removed through three-dimensional registration to high-precision Lidar or other control datasets. ArcticDEM is registered to seasonally-subsetted ICESat elevations due its global coverage and high report accuracy ( 10 cm). The vertical accuracy of ArcticDEM is then obtained from the statistics of the fit to the ICESat point cloud, which averages -0.01 m ± 0.07 m. ICESat, however, has a relatively coarse measurement footprint ( 70 m) which may impact the precision of the registration. Further, the ICESat data predates the ArcticDEM imagery by a decade, so that temporal changes in the surface may also impact the registration. Finally, biases may exist between different the different sensors in the ArcticDEM constellation. Here we assess the accuracy of ArcticDEM and the ICESat registration through comparison to multiple high-resolution airborne lidar datasets that were acquired within one year of the imagery used in ArcticDEM. We find the ICESat dataset is performing as anticipated, introducing no systematic bias during the coregistration process, and reducing vertical errors to within the uncertainty of the airborne Lidars. Preliminary sensor comparisons show no significant difference post coregistration, suggesting that there is no sensor bias between platforms, and all data is suitable for analysis without further correction. Here we will present accuracy assessments, observations and comparisons over diverse terrain in parts of Alaska and Greenland.

  14. Accuracy Improvement of Multi-Axis Systems Based on Laser Correction of Volumetric Geometric Errors

    NASA Astrophysics Data System (ADS)

    Teleshevsky, V. I.; Sokolov, V. A.; Pimushkin, Ya I.

    2018-04-01

    The article describes a volumetric geometric errors correction method for CNC- controlled multi-axis systems (machine-tools, CMMs etc.). The Kalman’s concept of “Control and Observation” is used. A versatile multi-function laser interferometer is used as Observer in order to measure machine’s error functions. A systematic error map of machine’s workspace is produced based on error functions measurements. The error map results into error correction strategy. The article proposes a new method of error correction strategy forming. The method is based on error distribution within machine’s workspace and a CNC-program postprocessor. The postprocessor provides minimal error values within maximal workspace zone. The results are confirmed by error correction of precision CNC machine-tools.

  15. Evaluation of a new photomask CD metrology tool

    NASA Astrophysics Data System (ADS)

    Dubuque, Leonard F.; Doe, Nicholas G.; St. Cin, Patrick

    1996-12-01

    In the integrated circuit (IC) photomask industry today, dense IC patterns, sub-micron critical dimensions (CD), and narrow tolerances for 64 M technologies and beyond are driving increased demands to minimize and characterize all components of photomask CD variation. This places strict requirements on photomask CD metrology in order to accurately characterize the mask CD error distribution. According to the gauge-maker's rule, measurement error must not exceed 30% of the tolerance on the product dimension measured or the gauge is not considered capable. The traditional single point repeatability tests are a poor measure of overall measurement system error in a dynamic, leading-edge technology environment. In such an environment, measurements may be taken at different points in the field- of-view due to stage in-accuracy, pattern recognition requirements, and throughput considerations. With this in mind, a set of experiments were designed to characterize thoroughly the metrology tool's repeatability and systematic error. Original experiments provided inconclusive results and had to be extended to obtain a full characterization of the system. Tests demonstrated a performance of better than 15 nm total CD error. Using this test as a tool for further development, the authors were able to determine the effects of various system components and measure the improvement with changes in optics, electronics, and software. Optimization of the optical path, electronics, and system software has yielded a new instrument with a total system error of better than 8 nm. Good collaboration between the photomask manufacturer and the equipment supplier has led to a realistic test of system performance and an improved CD measurement instrument.

  16. Early star catalogues of the southern sky. De Houtman, Kepler (second and third classes), and Halley

    NASA Astrophysics Data System (ADS)

    Verbunt, F.; van Gent, R. H.

    2011-06-01

    De Houtman in 1603, Kepler in 1627 and Halley in 1679 published the earliest modern catalogues of the southern sky. We provide machine-readable versions of these catalogues, make some comparisons between them, and briefly discuss their accuracy on the basis of comparison with data from the modern Hipparcos Catalogue. We also compare our results for De Houtman with those by Knobel in 1917 finding good overall agreement. About half of the ~ 200 new stars (with respect to Ptolemaios) added by De Houtman are in twelve new constellations, half in old constellations like Centaurus, Lupus and Argo. The right ascensions and declinations given by De Houtman have error distributions with widths of about 40', the longitudes and latitudes given by Kepler have error distributions with widths of about 45'. Halley improves on this by more than an order of magnitude to widths of about 3', and all entries in his catalogue can be identified. The measurement errors of Halley are due to a systematic deviation of his sextant (increasing with angle to 2' at 60°) and random errors of 0.7 arcmin. The position errors in the catalogue of Halley are dominated by the position errors in the reference stars, which he took from Brahe. The full Tables Houtman, Classis, Aliter and Halley (see Tables 6, 7, 8) are only available at the CDS via anonymous ftp to cdsarc.u-strasbg.fr (130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/530/A93

  17. [Improving blood safety: errors management in transfusion medicine].

    PubMed

    Bujandrić, Nevenka; Grujić, Jasmina; Krga-Milanović, Mirjana

    2014-01-01

    The concept of blood safety includes the entire transfusion chain starting with the collection of blood from the blood donor, and ending with blood transfusion to the patient. The concept involves quality management system as the systematic monitoring of adverse reactions and incidents regarding the blood donor or patient. Monitoring of near-miss errors show the critical points in the working process and increase transfusion safety. The aim of the study was to present the analysis results of adverse and unexpected events in transfusion practice with a potential risk to the health of blood donors and patients. One-year retrospective study was based on the collection, analysis and interpretation of written reports on medical errors in the Blood Transfusion Institute of Vojvodina. Errors were distributed according to the type, frequency and part of the working process where they occurred. Possible causes and corrective actions were described for each error. The study showed that there were not errors with potential health consequences for the blood donor/patient. Errors with potentially damaging consequences for patients were detected throughout the entire transfusion chain. Most of the errors were identified in the preanalytical phase. The human factor was responsible for the largest number of errors. Error reporting system has an important role in the error management and the reduction of transfusion-related risk of adverse events and incidents. The ongoing analysis reveals the strengths and weaknesses of the entire process and indicates the necessary changes. Errors in transfusion medicine can be avoided in a large percentage and prevention is cost-effective, systematic and applicable.

  18. Medication errors in paediatric care: a systematic review of epidemiology and an evaluation of evidence supporting reduction strategy recommendations

    PubMed Central

    Miller, Marlene R; Robinson, Karen A; Lubomski, Lisa H; Rinke, Michael L; Pronovost, Peter J

    2007-01-01

    Background Although children are at the greatest risk for medication errors, little is known about the overall epidemiology of these errors, where the gaps are in our knowledge, and to what extent national medication error reduction strategies focus on children. Objective To synthesise peer reviewed knowledge on children's medication errors and on recommendations to improve paediatric medication safety by a systematic literature review. Data sources PubMed, Embase and Cinahl from 1 January 2000 to 30 April 2005, and 11 national entities that have disseminated recommendations to improve medication safety. Study selection Inclusion criteria were peer reviewed original data in English language. Studies that did not separately report paediatric data were excluded. Data extraction Two reviewers screened articles for eligibility and for data extraction, and screened all national medication error reduction strategies for relevance to children. Data synthesis From 358 articles identified, 31 were included for data extraction. The definition of medication error was non‐uniform across the studies. Dispensing and administering errors were the most poorly and non‐uniformly evaluated. Overall, the distributional epidemiological estimates of the relative percentages of paediatric error types were: prescribing 3–37%, dispensing 5–58%, administering 72–75%, and documentation 17–21%. 26 unique recommendations for strategies to reduce medication errors were identified; none were based on paediatric evidence. Conclusions Medication errors occur across the entire spectrum of prescribing, dispensing, and administering, are common, and have a myriad of non‐evidence based potential reduction strategies. Further research in this area needs a firmer standardisation for items such as dose ranges and definitions of medication errors, broader scope beyond inpatient prescribing errors, and prioritisation of implementation of medication error reduction strategies. PMID:17403758

  19. Accounting for measurement error: a critical but often overlooked process.

    PubMed

    Harris, Edward F; Smith, Richard N

    2009-12-01

    Due to instrument imprecision and human inconsistencies, measurements are not free of error. Technical error of measurement (TEM) is the variability encountered between dimensions when the same specimens are measured at multiple sessions. A goal of a data collection regimen is to minimise TEM. The few studies that actually quantify TEM, regardless of discipline, report that it is substantial and can affect results and inferences. This paper reviews some statistical approaches for identifying and controlling TEM. Statistically, TEM is part of the residual ('unexplained') variance in a statistical test, so accounting for TEM, which requires repeated measurements, enhances the chances of finding a statistically significant difference if one exists. The aim of this paper was to review and discuss common statistical designs relating to types of error and statistical approaches to error accountability. This paper addresses issues of landmark location, validity, technical and systematic error, analysis of variance, scaled measures and correlation coefficients in order to guide the reader towards correct identification of true experimental differences. Researchers commonly infer characteristics about populations from comparatively restricted study samples. Most inferences are statistical and, aside from concerns about adequate accounting for known sources of variation with the research design, an important source of variability is measurement error. Variability in locating landmarks that define variables is obvious in odontometrics, cephalometrics and anthropometry, but the same concerns about measurement accuracy and precision extend to all disciplines. With increasing accessibility to computer-assisted methods of data collection, the ease of incorporating repeated measures into statistical designs has improved. Accounting for this technical source of variation increases the chance of finding biologically true differences when they exist.

  20. Decomposition of Sources of Errors in Seasonal Streamflow Forecasting over the U.S. Sunbelt

    NASA Technical Reports Server (NTRS)

    Mazrooei, Amirhossein; Sinah, Tusshar; Sankarasubramanian, A.; Kumar, Sujay V.; Peters-Lidard, Christa D.

    2015-01-01

    Seasonal streamflow forecasts, contingent on climate information, can be utilized to ensure water supply for multiple uses including municipal demands, hydroelectric power generation, and for planning agricultural operations. However, uncertainties in the streamflow forecasts pose significant challenges in their utilization in real-time operations. In this study, we systematically decompose various sources of errors in developing seasonal streamflow forecasts from two Land Surface Models (LSMs) (Noah3.2 and CLM2), which are forced with downscaled and disaggregated climate forecasts. In particular, the study quantifies the relative contributions of the sources of errors from LSMs, climate forecasts, and downscaling/disaggregation techniques in developing seasonal streamflow forecast. For this purpose, three month ahead seasonal precipitation forecasts from the ECHAM4.5 general circulation model (GCM) were statistically downscaled from 2.8deg to 1/8deg spatial resolution using principal component regression (PCR) and then temporally disaggregated from monthly to daily time step using kernel-nearest neighbor (K-NN) approach. For other climatic forcings, excluding precipitation, we considered the North American Land Data Assimilation System version 2 (NLDAS-2) hourly climatology over the years 1979 to 2010. Then the selected LSMs were forced with precipitation forecasts and NLDAS-2 hourly climatology to develop retrospective seasonal streamflow forecasts over a period of 20 years (1991-2010). Finally, the performance of LSMs in forecasting streamflow under different schemes was analyzed to quantify the relative contribution of various sources of errors in developing seasonal streamflow forecast. Our results indicate that the most dominant source of errors during winter and fall seasons is the errors due to ECHAM4.5 precipitation forecasts, while temporal disaggregation scheme contributes to maximum errors during summer season.

  1. GREAT3 results - I. Systematic errors in shear estimation and the impact of real galaxy morphology

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mandelbaum, R.; Rowe, B.; Armstrong, R.

    2015-05-01

    We present first results from the third GRavitational lEnsing Accuracy Testing (GREAT3) challenge, the third in a sequence of challenges for testing methods of inferring weak gravitational lensing shear distortions from simulated galaxy images. GREAT3 was divided into experiments to test three specific questions, and included simulated space- and ground-based data with constant or cosmologically varying shear fields. The simplest (control) experiment included parametric galaxies with a realistic distribution of signal-to-noise, size, and ellipticity, and a complex point spread function (PSF). The other experiments tested the additional impact of realistic galaxy morphology, multiple exposure imaging, and the uncertainty about amore » spatially varying PSF; the last two questions will be explored in Paper II. The 24 participating teams competed to estimate lensing shears to within systematic error tolerances for upcoming Stage-IV dark energy surveys, making 1525 submissions overall. GREAT3 saw considerable variety and innovation in the types of methods applied. Several teams now meet or exceed the targets in many of the tests conducted (to within the statistical errors). We conclude that the presence of realistic galaxy morphology in simulations changes shear calibration biases by ~1 per cent for a wide range of methods. Other effects such as truncation biases due to finite galaxy postage stamps, and the impact of galaxy type as measured by the Sérsic index, are quantified for the first time. Our results generalize previous studies regarding sensitivities to galaxy size and signal-to-noise, and to PSF properties such as seeing and defocus. Almost all methods’ results support the simple model in which additive shear biases depend linearly on PSF ellipticity.« less

  2. Parton Dynamics Inferred from High-Mass Drell-Yan Dimuons Induced by 120 GeV p+D Interactions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ramson, Bryan J.

    2018-01-01

    Fermilab Experiment 906/SeaQuest (E906/SeaQuest) is the latest in a well established tradition of studying leptoproduction from the annihilation of a quark and anti-quark, known as the Drell-Yan process. The broad goal of E906/SeaQuest is measuring various properties of nucleon structure in order to learn more about quarks and Quantum Chromodynamics (QCD), the mathematical description of the strong force. The present work investigated violations of the Lam-Tung relation between virtual photon polarization and quark and lepton angular momentum. The violation of Lam-Tung can be explained as the signature of quark-nucleon spin-orbit coupling through the use of the Transverse-Momentum-Dependent (TMD) framework, whichmore » assumes that the initial transverse momentum of quarks is smaller than the hard scattering scale, but also non-negligible. An analysis of the angular moments in Drell-Yan collected by E906/SeaQuest was performed with four different configurations in order to estimate the systematic errors attributed to each correction. After correction for background and error propagation, the final extraction of the azimuthal moment excluding contributions from the trigger was ν = 0.151 ± 0.88(stat.) ± 0.346(syst.) at an average transverse momentum of 0.87 ± 0.50 GeV/c and an average dimuon mass of 5.48 ± 0.70 GeV. In the future, the magnitude of the systematic errors on the extraction could potentially be reduced by improving the quality of the trigger efficiency calculation, improving the intensity dependent event reconstruction efficiency, considering the changes in acceptance due to a beam shift relative to the E906/SeaQuest spectrometer, and improving the modeling of background.« less

  3. Measurement errors when estimating the vertical jump height with flight time using photocell devices: the example of Optojump.

    PubMed

    Attia, A; Dhahbi, W; Chaouachi, A; Padulo, J; Wong, D P; Chamari, K

    2017-03-01

    Common methods to estimate vertical jump height (VJH) are based on the measurements of flight time (FT) or vertical reaction force. This study aimed to assess the measurement errors when estimating the VJH with flight time using photocell devices in comparison with the gold standard jump height measured by a force plate (FP). The second purpose was to determine the intrinsic reliability of the Optojump photoelectric cells in estimating VJH. For this aim, 20 subjects (age: 22.50±1.24 years) performed maximal vertical jumps in three modalities in randomized order: the squat jump (SJ), counter-movement jump (CMJ), and CMJ with arm swing (CMJarm). Each trial was simultaneously recorded by the FP and Optojump devices. High intra-class correlation coefficients (ICCs) for validity (0.98-0.99) and low limits of agreement (less than 1.4 cm) were found; even a systematic difference in jump height was consistently observed between FT and double integration of force methods (-31% to -27%; p<0.001) and a large effect size (Cohen's d >1.2). Intra-session reliability of Optojump was excellent, with ICCs ranging from 0.98 to 0.99, low coefficients of variation (3.98%), and low standard errors of measurement (0.8 cm). It was concluded that there was a high correlation between the two methods to estimate the vertical jump height, but the FT method cannot replace the gold standard, due to the large systematic bias. According to our results, the equations of each of the three jump modalities were presented in order to obtain a better estimation of the jump height.

  4. GREAT3 results - I. Systematic errors in shear estimation and the impact of real galaxy morphology

    DOE PAGES

    Mandelbaum, Rachel; Rowe, Barnaby; Armstrong, Robert; ...

    2015-05-11

    The study present first results from the third GRavitational lEnsing Accuracy Testing (GREAT3) challenge, the third in a sequence of challenges for testing methods of inferring weak gravitational lensing shear distortions from simulated galaxy images. GREAT3 was divided into experiments to test three specific questions, and included simulated space- and ground-based data with constant or cosmologically varying shear fields. The simplest (control) experiment included parametric galaxies with a realistic distribution of signal-to-noise, size, and ellipticity, and a complex point spread function (PSF). The other experiments tested the additional impact of realistic galaxy morphology, multiple exposure imaging, and the uncertainty aboutmore » a spatially varying PSF; the last two questions will be explored in Paper II. The 24 participating teams competed to estimate lensing shears to within systematic error tolerances for upcoming Stage-IV dark energy surveys, making 1525 submissions overall. GREAT3 saw considerable variety and innovation in the types of methods applied. Several teams now meet or exceed the targets in many of the tests conducted (to within the statistical errors). We conclude that the presence of realistic galaxy morphology in simulations changes shear calibration biases by ~1 per cent for a wide range of methods. Other effects such as truncation biases due to finite galaxy postage stamps, and the impact of galaxy type as measured by the Sérsic index, are quantified for the first time. Our results generalize previous studies regarding sensitivities to galaxy size and signal-to-noise, and to PSF properties such as seeing and defocus. Almost all methods’ results support the simple model in which additive shear biases depend linearly on PSF ellipticity.« less

  5. Causes of vision loss worldwide, 1990-2010: a systematic analysis.

    PubMed

    Bourne, Rupert R A; Stevens, Gretchen A; White, Richard A; Smith, Jennifer L; Flaxman, Seth R; Price, Holly; Jonas, Jost B; Keeffe, Jill; Leasher, Janet; Naidoo, Kovin; Pesudovs, Konrad; Resnikoff, Serge; Taylor, Hugh R

    2013-12-01

    Data on causes of vision impairment and blindness are important for development of public health policies, but comprehensive analysis of change in prevalence over time is lacking. We did a systematic analysis of published and unpublished data on the causes of blindness (visual acuity in the better eye less than 3/60) and moderate and severe vision impairment ([MSVI] visual acuity in the better eye less than 6/18 but at least 3/60) from 1980 to 2012. We estimated the proportions of overall vision impairment attributable to cataract, glaucoma, macular degeneration, diabetic retinopathy, trachoma, and uncorrected refractive error in 1990-2010 by age, geographical region, and year. In 2010, 65% (95% uncertainty interval [UI] 61-68) of 32·4 million blind people and 76% (73-79) of 191 million people with MSVI worldwide had a preventable or treatable cause, compared with 68% (95% UI 65-70) of 31·8 million and 80% (78-83) of 172 million in 1990. Leading causes worldwide in 1990 and 2010 for blindness were cataract (39% and 33%, respectively), uncorrected refractive error (20% and 21%), and macular degeneration (5% and 7%), and for MSVI were uncorrected refractive error (51% and 53%), cataract (26% and 18%), and macular degeneration (2% and 3%). Causes of blindness varied substantially by region. Worldwide and in all regions more women than men were blind or had MSVI due to cataract and macular degeneration. The differences and temporal changes we found in causes of blindness and MSVI have implications for planning and resource allocation in eye care. Bill & Melinda Gates Foundation, Fight for Sight, Fred Hollows Foundation, and Brien Holden Vision Institute. Copyright © 2013 Bourne et al. Open Access article distributed under the terms of CC BY. Published by .. All rights reserved.

  6. Limitations of the planning organ at risk volume (PRV) concept.

    PubMed

    Stroom, Joep C; Heijmen, Ben J M

    2006-09-01

    Previously, we determined a planning target volume (PTV) margin recipe for geometrical errors in radiotherapy equal to M(T) = 2 Sigma + 0.7 sigma, with Sigma and sigma standard deviations describing systematic and random errors, respectively. In this paper, we investigated margins for organs at risk (OAR), yielding the so-called planning organ at risk volume (PRV). For critical organs with a maximum dose (D(max)) constraint, we calculated margins such that D(max) in the PRV is equal to the motion averaged D(max) in the (moving) clinical target volume (CTV). We studied margins for the spinal cord in 10 head-and-neck cases and 10 lung cases, each with two different clinical plans. For critical organs with a dose-volume constraint, we also investigated whether a margin recipe was feasible. For the 20 spinal cords considered, the average margin recipe found was: M(R) = 1.6 Sigma + 0.2 sigma with variations for systematic and random errors of 1.2 Sigma to 1.8 Sigma and -0.2 sigma to 0.6 sigma, respectively. The variations were due to differences in shape and position of the dose distributions with respect to the cords. The recipe also depended significantly on the volume definition of D(max). For critical organs with a dose-volume constraint, the PRV concept appears even less useful because a margin around, e.g., the rectum changes the volume in such a manner that dose-volume constraints stop making sense. The concept of PRV for planning of radiotherapy is of limited use. Therefore, alternative ways should be developed to include geometric uncertainties of OARs in radiotherapy planning.

  7. Measurement errors when estimating the vertical jump height with flight time using photocell devices: the example of Optojump

    PubMed Central

    Attia, A; Chaouachi, A; Padulo, J; Wong, DP; Chamari, K

    2016-01-01

    Common methods to estimate vertical jump height (VJH) are based on the measurements of flight time (FT) or vertical reaction force. This study aimed to assess the measurement errors when estimating the VJH with flight time using photocell devices in comparison with the gold standard jump height measured by a force plate (FP). The second purpose was to determine the intrinsic reliability of the Optojump photoelectric cells in estimating VJH. For this aim, 20 subjects (age: 22.50±1.24 years) performed maximal vertical jumps in three modalities in randomized order: the squat jump (SJ), counter-movement jump (CMJ), and CMJ with arm swing (CMJarm). Each trial was simultaneously recorded by the FP and Optojump devices. High intra-class correlation coefficients (ICCs) for validity (0.98-0.99) and low limits of agreement (less than 1.4 cm) were found; even a systematic difference in jump height was consistently observed between FT and double integration of force methods (-31% to -27%; p<0.001) and a large effect size (Cohen’s d>1.2). Intra-session reliability of Optojump was excellent, with ICCs ranging from 0.98 to 0.99, low coefficients of variation (3.98%), and low standard errors of measurement (0.8 cm). It was concluded that there was a high correlation between the two methods to estimate the vertical jump height, but the FT method cannot replace the gold standard, due to the large systematic bias. According to our results, the equations of each of the three jump modalities were presented in order to obtain a better estimation of the jump height. PMID:28416900

  8. Assessment of radargrammetric DSMs from TerraSAR-X Stripmap images in a mountainous relief area of the Amazon region

    NASA Astrophysics Data System (ADS)

    de Oliveira, Cleber Gonzales; Paradella, Waldir Renato; da Silva, Arnaldo de Queiroz

    The Brazilian Amazon is a vast territory with an enormous need for mapping and monitoring of renewable and non-renewable resources. Due to the adverse environmental condition (rain, cloud, dense vegetation) and difficult access, topographic information is still poor, and when available needs to be updated or re-mapped. In this paper, the feasibility of using Digital Surface Models (DSMs) extracted from TerraSAR-X Stripmap stereo-pair images for detailed topographic mapping was investigated for a mountainous area in the Carajás Mineral Province, located on the easternmost border of the Brazilian Amazon. The quality of the radargrammetric DSMs was evaluated regarding field altimetric measurements. Precise topographic field information acquired from a Global Positioning System (GPS) was used as Ground Control Points (GCPs) for the modeling of the stereoscopic DSMs and as Independent Check Points (ICPs) for the calculation of elevation accuracies. The analysis was performed following two ways: (1) the use of Root Mean Square Error (RMSE) and (2) calculations of systematic error (bias) and precision. The test for significant systematic error was based on the Student's-t distribution and the test of precision was based on the Chi-squared distribution. The investigation has shown that the accuracy of the TerraSAR-X Stripmap DSMs met the requirements for 1:50,000 map (Class A) as requested by the Brazilian Standard for Cartographic Accuracy. Thus, the use of TerraSAR-X Stripmap images can be considered a promising alternative for detailed topographic mapping in similar environments of the Amazon region, where available topographic information is rare or presents low quality.

  9. Particle Tracking on the BNL Relativistic Heavy Ion Collider

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dell, G. F.

    1986-08-07

    Tracking studies including the effects of random multipole errors as well as the effects of random and systematic multipole errors have been made for RHIC. Initial results for operating at an off diagonal working point are discussed.

  10. A material sensitivity study on the accuracy of deformable organ registration using linear biomechanical models

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chi, Y.; Liang, J.; Yan, D.

    2006-02-15

    Model-based deformable organ registration techniques using the finite element method (FEM) have recently been investigated intensively and applied to image-guided adaptive radiotherapy (IGART). These techniques assume that human organs are linearly elastic material, and their mechanical properties are predetermined. Unfortunately, the accurate measurement of the tissue material properties is challenging and the properties usually vary between patients. A common issue is therefore the achievable accuracy of the calculation due to the limited access to tissue elastic material constants. In this study, we performed a systematic investigation on this subject based on tissue biomechanics and computer simulations to establish the relationshipsmore » between achievable registration accuracy and tissue mechanical and organ geometrical properties. Primarily we focused on image registration for three organs: rectal wall, bladder wall, and prostate. The tissue anisotropy due to orientation preference in tissue fiber alignment is captured by using an orthotropic or a transversely isotropic elastic model. First we developed biomechanical models for the rectal wall, bladder wall, and prostate using simplified geometries and investigated the effect of varying material parameters on the resulting organ deformation. Then computer models based on patient image data were constructed, and image registrations were performed. The sensitivity of registration errors was studied by perturbating the tissue material properties from their mean values while fixing the boundary conditions. The simulation results demonstrated that registration error for a subvolume increases as its distance from the boundary increases. Also, a variable associated with material stability was found to be a dominant factor in registration accuracy in the context of material uncertainty. For hollow thin organs such as rectal walls and bladder walls, the registration errors are limited. Given 30% in material uncertainty, the registration error is limited to within 1.3 mm. For a solid organ such as the prostate, the registration errors are much larger. Given 30% in material uncertainty, the registration error can reach 4.5 mm. However, the registration error distribution for prostates shows that most of the subvolumes have a much smaller registration error. A deformable organ registration technique that uses FEM is a good candidate in IGART if the mean material parameters are available.« less

  11. Heritability analyses of IQ scores: science or numerology?

    PubMed

    Layzer, D

    1974-03-29

    Estimates of IQ heritability are subject to a variety of systematic errors. The IQ scores themselves contain uncontrollable, systematic errors of unknown magnitude. These arise because IQ scores, unlike conventional physical and biological measurements, have a purely instrumental definition. The effects of these errors are apparent in the very large discrepancies among IQ correlations measured by different investigators. Genotype-environment correlations, whose effects can sometimes be minimized, if not wholly eliminated, in experiments with plants and animals, are nearly always important in human populations. The absence of significant effects arising from genotype-environment correlations is a necessary condition for the applicability of conventional heritability analysis to phenotypically plastic traits. When this condition fails, no quantitative inferences about heritability can be drawn from measured phenotypic variances and covariances, except under special conditions that are unlikely to be satisfied by phenotypically plastic traits in human populations. Inadequate understanding of the precise environmental factors relevant to the development of specific behavioral traits is an important source of systematic errors, as is the inability to allow adequately for the effects of assortative mating and gene-gene interaction. Systematic cultural differences and differences in psychological environment among races and among sociocco-nomic groups vitiate any attempt to draw from IQ data meaningful inferences about genetic differences. Estimates based on phenotypic correlations between separated monozygotic twins-usually considered to be the most reliable kind of estimates-are vitiated by systematic errors inherent in IQ tests, by the presence of genotype-environment correlation, and by the lack of detailed understanding of environmental factors relevant to the development of behavioral traits. Other kinds of estimates are beset, in addition, by systematic errors arising from incomplete allowance for the effects of assortative mating and from gene-gene interactions. The only potentially useful data are phenotypic correlations between unrelated foster children reared together, which could, in principle, yield lower limits for e(2). Available data indicate that, for unrelated foster children reared together, the broad heritability (h(2)) may lie between 0.0 and 0.5. This estimate does not apply to populations composed of children reared by their biological parents or by near relatives. For such populations the heritability of IQ remains undefined. The only data that might yield meaningful estimates ot narrow heritability are phenotypic correlations between half-sibs reared in statistically independent environments. No useful data of this kind are available. Intervention studies like Heber's Milwaukee Project afford an alternative and comparatively direct way of studying the plasticity of cognitive and other behavioral traits in human populations. Results obtained so far strongly suggest that the development of cognitive skills is highly sensitive to variations in environmental factors. These conclusions have three obvious implications for the broader issues mentioned at the beginning of this article. 1) Published analyses of IQ data provide no support whatever for Jensen's thesis that inequalities in cognitive performance are due largely to genetic differences. As Lewontin (8) has clearly shown, the value of the broad heritability of IQ is in any case only marginally relevant to this question. I have argued that conventional estimates of the broad heritability of IQ are invalid and that the only data on which potentially valid estimates might be based are consistent with a broad heritability of less than 0.5. On the other hand, intervention studies, if their findings prove to be replicable, would directly establish that, under suitable conditions, the offspring of parents whose cognitive skills are so poorly developed as to exclude them from all but the most menial occupations can achieve what are regarded as distinctly high levels of cognitive performance. Thus, despite the fact that children differ suibstantially in cognitive aptitudes and appetites, and despite the very high probability that these differences have a substantial genetic component, available scientific evidence strongly suggests that environmental factors are responsible for the failure of children not suffering from specific neurological disorders to achieve adequate levels of cognitive performance. 2) Under prevailing social conditions, no valid inferences can be drawn from IQ data concerning systematic genetic differences among races or socioeconomic groups. Research along present lines directed toward this end-whatever its ethical status-is scientifically worthless. 3) Since there are no suitable data for estimating the narrow heritability of IQ, it seems pointless to speculate about the prospects for a hereditary meritocracy based on IQ.

  12. Digital identification of cartographic control points

    NASA Technical Reports Server (NTRS)

    Gaskell, R. W.

    1988-01-01

    Techniques have been developed for the sub-pixel location of control points in satellite images returned by the Voyager spacecraft. The procedure uses digital imaging data in the neighborhood of the point to form a multipicture model of a piece of the surface. Comparison of this model with the digital image in each picture determines the control point locations to about a tenth of a pixel. At this level of precision, previously insignificant effects must be considered, including chromatic aberration, high level imaging distortions, and systematic errors due to navigation uncertainties. Use of these methods in the study of Jupiter's satellite Io has proven very fruitful.

  13. Magnetostriction and palæomagnetism of igneous rocks

    USGS Publications Warehouse

    Graham, John W.; Buddington, A.F.; Balsley, James R.

    1959-01-01

    IN a recent communication, Stott and Stacey1 report on a “crucial experiment” from which they conclude: “This excellent agreement between the dip and the directions of artificial thermoremanent magnetization of the stressed and unstressed rocks indicates that large systematic errors due to magnetostriction are most improbable in igneous rocks of types normally used for palæomagnetic work”. This experiment was intended to test the proposals2 and measurements3 bearing on the role of magnetostriction in rock magnetism. We present here our reasons for believing that the experiment was not crucial and that the conclusion is not justified.

  14. A vacuum gauge based on an ultracold gas

    NASA Astrophysics Data System (ADS)

    Makhalov, V. B.; Turlapov, A. V.

    2017-06-01

    We report the design and application of a primary vacuum gauge based on an ultracold gas of atoms in an optical dipole trap. The pressure is calculated from the confinement time for atoms in the trap. The relationship between pressure and confinement time is established from the first principles owing to elimination of all channels introducing losses, except for knocking out an atom from the trap due to collisions with a residual gas particle. The method requires the knowledge of the gas chemical composition in the vacuum chamber, and, in the absence of this information, the systematic error is less than that of the ionisation sensor.

  15. Constraining the geometry of AGN outflows with reflection spectroscopy

    NASA Astrophysics Data System (ADS)

    Parker, M. L.; Buisson, D. J. K.; Jiang, J.; Gallo, L. C.; Kara, E.; Matzeu, G. A.; Walton, D. J.

    2018-06-01

    We collate active galactic nuclei (AGN) with reported detections of both relativistic reflection and ultra-fast outflows. By comparing the inclination of the inner disc from reflection with the line-of-sight velocity of the outflow, we show that it is possible to meaningfully constrain the geometry of the absorbing material. We find a clear relation between the velocity and inclination, and demonstrate that it can potentially be explained either by simple wind geometries or by absorption from the disc surface. Due to systematic errors and a shortage of high-quality simultaneous measurements our conclusions are tentative, but this study represents a proof-of-concept that has great potential.

  16. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Miftakov, V

    The BABAR experiment at SLAC provides an opportunity for measurement of the Standard Model parameters describing CP violation. A method of measuring the CKM matrix element |V{sub cb}| using Inclusive Semileptonic B decays in events tagged by a fully reconstructed decay of one of the B mesons is presented here. This mode is considered to be one of the most powerful approaches due to its large branching fraction, simplicity of the theoretical description and very clean experimental signatures. Using fully reconstructed B mesons to flag B{bar B} event we were able to produce the spectrum and branching fraction for electronmore » momenta P{sub C.M.S.} > 0.5 GeV/c. Extrapolation to the lower momenta has been carried out with Heavy Quark Effective Theory. The branching fractions are measured separately for charged and neutral B mesons. For 82 fb{sup -1} of data collected at BABAR we obtain: BR(B{sup {+-}} {yields} X e{bar {nu}}) = 10.63 {+-} 0.24 {+-} 0.29%, BR(B{sup 0} {yields} X e{bar {nu}}) = 10.68 {+-} 0.34 {+-} 0.31%, averaged BR(B {yields} X e{bar {nu}}) = 10.65 {+-} 0.19 {+-} 0.27%, ratio of Branching fractions BR(B{sup {+-}})/BR(B{sup 0}) = 0.996 {+-} 0.039 {+-} 0.015 (errors are statistical and systematic, respectively). They also obtain V{sub cb} = 0.0409 {+-} 0.00074 {+-} 0.0010 {+-} 0.000858 (errors are: statistical, systematic and theoretical).« less

  17. A new stochastic model considering satellite clock interpolation errors in precise point positioning

    NASA Astrophysics Data System (ADS)

    Wang, Shengli; Yang, Fanlin; Gao, Wang; Yan, Lizi; Ge, Yulong

    2018-03-01

    Precise clock products are typically interpolated based on the sampling interval of the observational data when they are used for in precise point positioning. However, due to the occurrence of white noise in atomic clocks, a residual component of such noise will inevitable reside within the observations when clock errors are interpolated, and such noise will affect the resolution of the positioning results. In this paper, which is based on a twenty-one-week analysis of the atomic clock noise characteristics of numerous satellites, a new stochastic observation model that considers satellite clock interpolation errors is proposed. First, the systematic error of each satellite in the IGR clock product was extracted using a wavelet de-noising method to obtain the empirical characteristics of atomic clock noise within each clock product. Then, based on those empirical characteristics, a stochastic observation model was structured that considered the satellite clock interpolation errors. Subsequently, the IGR and IGS clock products at different time intervals were used for experimental validation. A verification using 179 stations worldwide from the IGS showed that, compared with the conventional model, the convergence times using the stochastic model proposed in this study were respectively shortened by 4.8% and 4.0% when the IGR and IGS 300-s-interval clock products were used and by 19.1% and 19.4% when the 900-s-interval clock products were used. Furthermore, the disturbances during the initial phase of the calculation were also effectively improved.

  18. Content-based multiple bitstream image transmission over noisy channels.

    PubMed

    Cao, Lei; Chen, Chang Wen

    2002-01-01

    In this paper, we propose a novel combined source and channel coding scheme for image transmission over noisy channels. The main feature of the proposed scheme is a systematic decomposition of image sources so that unequal error protection can be applied according to not only bit error sensitivity but also visual content importance. The wavelet transform is adopted to hierarchically decompose the image. The association between the wavelet coefficients and what they represent spatially in the original image is fully exploited so that wavelet blocks are classified based on their corresponding image content. The classification produces wavelet blocks in each class with similar content and statistics, therefore enables high performance source compression using the set partitioning in hierarchical trees (SPIHT) algorithm. To combat the channel noise, an unequal error protection strategy with rate-compatible punctured convolutional/cyclic redundancy check (RCPC/CRC) codes is implemented based on the bit contribution to both peak signal-to-noise ratio (PSNR) and visual quality. At the receiving end, a postprocessing method making use of the SPIHT decoding structure and the classification map is developed to restore the degradation due to the residual error after channel decoding. Experimental results show that the proposed scheme is indeed able to provide protection both for the bits that are more sensitive to errors and for the more important visual content under a noisy transmission environment. In particular, the reconstructed images illustrate consistently better visual quality than using the single-bitstream-based schemes.

  19. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Calcino, Josh; Davis, Tamara, E-mail: j.calcino@uq.edu.au, E-mail: tamarad@physics.uq.edu.au

    Recent papers have shown that a small systematic redshift shift (Δ z ∼ 10{sup −5}) in measurements of type Ia supernovae can cause a significant bias (∼1%) in the recovery of cosmological parameters. Such a redshift shift could be caused, for example, by a gravitational redshift due to the density of our local environment. The sensitivity of supernova data to redshift shifts means supernovae make excellent probes of inhomogeneities. We therefore invert the analysis, and try to diagnose the nature of our local gravitational environment by fitting for Δ z as an extra free parameter alongside the usual cosmological parameters.more » Using the Joint Light-curve SN Ia dataset we find the best fit includes a systematic redshift shift of Δ z = (2.6{sup +2.7}{sub −2.8}) × 10{sup −4}. This is a larger shift than would be expected due to gravitational redshifts in a standard Λ-Cold Dark Matter universe (though still consistent with zero), and would correspond to a monopole Doppler shift of about 100 km s{sup −1} moving away from the Milky-Way. However, since most supernova measurements are made to a redshift precision of no better than 10{sup −3}, it is possible that a systematic error smaller than the statistical error remains in the data and is responsible for the shift; or that it is an insignificant statistical fluctuation. We find that when Δ z is included as a free parameter while fitting to the JLA SN Ia data, the constraints on the matter density shifts to Ω {sub m} = 0.313{sup +0.042}{sub −0.040}, bringing it into better agreement with the CMB cosmological parameter constraints from Planck. A positive Δ z ∼ 2.6×10{sup −4} would also cause us to overestimate the supernova measurement of Hubble's constant by Δ H {sub 0} ∼ 1 kms{sup −1}Mpc{sup −1}. However this overestimation should diminish as one increases the low-redshift cutoff, and this is not seen in the most recent data.« less

  20. Modeling and Measurement Constraints in Fault Diagnostics for HVAC Systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Najafi, Massieh; Auslander, David M.; Bartlett, Peter L.

    2010-05-30

    Many studies have shown that energy savings of five to fifteen percent are achievable in commercial buildings by detecting and correcting building faults, and optimizing building control systems. However, in spite of good progress in developing tools for determining HVAC diagnostics, methods to detect faults in HVAC systems are still generally undeveloped. Most approaches use numerical filtering or parameter estimation methods to compare data from energy meters and building sensors to predictions from mathematical or statistical models. They are effective when models are relatively accurate and data contain few errors. In this paper, we address the case where models aremore » imperfect and data are variable, uncertain, and can contain error. We apply a Bayesian updating approach that is systematic in managing and accounting for most forms of model and data errors. The proposed method uses both knowledge of first principle modeling and empirical results to analyze the system performance within the boundaries defined by practical constraints. We demonstrate the approach by detecting faults in commercial building air handling units. We find that the limitations that exist in air handling unit diagnostics due to practical constraints can generally be effectively addressed through the proposed approach.« less

  1. Towards System Calibration of Panoramic Laser Scanners from a Single Station

    PubMed Central

    Medić, Tomislav; Holst, Christoph; Kuhlmann, Heiner

    2017-01-01

    Terrestrial laser scanner measurements suffer from systematic errors due to internal misalignments. The magnitude of the resulting errors in the point cloud in many cases exceeds the magnitude of random errors. Hence, the task of calibrating a laser scanner is important for applications with high accuracy demands. This paper primarily addresses the case of panoramic terrestrial laser scanners. Herein, it is proven that most of the calibration parameters can be estimated from a single scanner station without a need for any reference information. This hypothesis is confirmed through an empirical experiment, which was conducted in a large machine hall using a Leica Scan Station P20 panoramic laser scanner. The calibration approach is based on the widely used target-based self-calibration approach, with small modifications. A new angular parameterization is used in order to implicitly introduce measurements in two faces of the instrument and for the implementation of calibration parameters describing genuine mechanical misalignments. Additionally, a computationally preferable calibration algorithm based on the two-face measurements is introduced. In the end, the calibration results are discussed, highlighting all necessary prerequisites for the scanner calibration from a single scanner station. PMID:28513548

  2. Coarse-graining errors and numerical optimization using a relative entropy framework.

    PubMed

    Chaimovich, Aviel; Shell, M Scott

    2011-03-07

    The ability to generate accurate coarse-grained models from reference fully atomic (or otherwise "first-principles") ones has become an important component in modeling the behavior of complex molecular systems with large length and time scales. We recently proposed a novel coarse-graining approach based upon variational minimization of a configuration-space functional called the relative entropy, S(rel), that measures the information lost upon coarse-graining. Here, we develop a broad theoretical framework for this methodology and numerical strategies for its use in practical coarse-graining settings. In particular, we show that the relative entropy offers tight control over the errors due to coarse-graining in arbitrary microscopic properties, and suggests a systematic approach to reducing them. We also describe fundamental connections between this optimization methodology and other coarse-graining strategies like inverse Monte Carlo, force matching, energy matching, and variational mean-field theory. We suggest several new numerical approaches to its minimization that provide new coarse-graining strategies. Finally, we demonstrate the application of these theoretical considerations and algorithms to a simple, instructive system and characterize convergence and errors within the relative entropy framework. © 2011 American Institute of Physics.

  3. COSMIC SHEAR MEASUREMENT USING AUTO-CONVOLVED IMAGES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Li, Xiangchong; Zhang, Jun, E-mail: betajzhang@sjtu.edu.cn

    2016-10-20

    We study the possibility of using quadrupole moments of auto-convolved galaxy images to measure cosmic shear. The autoconvolution of an image corresponds to the inverse Fourier transformation of its power spectrum. The new method has the following advantages: the smearing effect due to the point-spread function (PSF) can be corrected by subtracting the quadrupole moments of the auto-convolved PSF; the centroid of the auto-convolved image is trivially identified; the systematic error due to noise can be directly removed in Fourier space; the PSF image can also contain noise, the effect of which can be similarly removed. With a large ensemblemore » of simulated galaxy images, we show that the new method can reach a sub-percent level accuracy under general conditions, albeit with increasingly large stamp size for galaxies of less compact profiles.« less

  4. Improving Planck calibration by including frequency-dependent relativistic corrections

    NASA Astrophysics Data System (ADS)

    Quartin, Miguel; Notari, Alessio

    2015-09-01

    The Planck satellite detectors are calibrated in the 2015 release using the "orbital dipole", which is the time-dependent dipole generated by the Doppler effect due to the motion of the satellite around the Sun. Such an effect has also relativistic time-dependent corrections of relative magnitude 10-3, due to coupling with the "solar dipole" (the motion of the Sun compared to the CMB rest frame), which are included in the data calibration by the Planck collaboration. We point out that such corrections are subject to a frequency-dependent multiplicative factor. This factor differs from unity especially at the highest frequencies, relevant for the HFI instrument. Since currently Planck calibration errors are dominated by systematics, to the point that polarization data is currently unreliable at large scales, such a correction can in principle be highly relevant for future data releases.

  5. Efficacy and workload analysis of a fixed vertical couch position technique and a fixed‐action–level protocol in whole‐breast radiotherapy

    PubMed Central

    Verhoeven, Karolien; Weltens, Caroline; Van den Heuvel, Frank

    2015-01-01

    Quantification of the setup errors is vital to define appropriate setup margins preventing geographical misses. The no‐action–level (NAL) correction protocol reduces the systematic setup errors and, hence, the setup margins. The manual entry of the setup corrections in the record‐and‐verify software, however, increases the susceptibility of the NAL protocol to human errors. Moreover, the impact of the skin mobility on the anteroposterior patient setup reproducibility in whole‐breast radiotherapy (WBRT) is unknown. In this study, we therefore investigated the potential of fixed vertical couch position‐based patient setup in WBRT. The possibility to introduce a threshold for correction of the systematic setup errors was also explored. We measured the anteroposterior, mediolateral, and superior–inferior setup errors during fractions 1–12 and weekly thereafter with tangential angled single modality paired imaging. These setup data were used to simulate the residual setup errors of the NAL protocol, the fixed vertical couch position protocol, and the fixed‐action–level protocol with different correction thresholds. Population statistics of the setup errors of 20 breast cancer patients and 20 breast cancer patients with additional regional lymph node (LN) irradiation were calculated to determine the setup margins of each off‐line correction protocol. Our data showed the potential of the fixed vertical couch position protocol to restrict the systematic and random anteroposterior residual setup errors to 1.8 mm and 2.2 mm, respectively. Compared to the NAL protocol, a correction threshold of 2.5 mm reduced the frequency of mediolateral and superior–inferior setup corrections with 40% and 63%, respectively. The implementation of the correction threshold did not deteriorate the accuracy of the off‐line setup correction compared to the NAL protocol. The combination of the fixed vertical couch position protocol, for correction of the anteroposterior setup error, and the fixed‐action–level protocol with 2.5 mm correction threshold, for correction of the mediolateral and the superior–inferior setup errors, was proved to provide adequate and comparable patient setup accuracy in WBRT and WBRT with additional LN irradiation. PACS numbers: 87.53.Kn, 87.57.‐s

  6. The Experimental Probe of Inflationary Cosmology: A Mission Concept Study for NASA's Einstein Inflation Probe

    NASA Technical Reports Server (NTRS)

    2008-01-01

    When we began our study we sought to answer five fundamental implementation questions: 1) can foregrounds be measured and subtracted to a sufficiently low level?; 2) can systematic errors be controlled?; 3) can we develop optics with sufficiently large throughput, low polarization, and frequency coverage from 30 to 300 GHz?; 4) is there a technical path to realizing the sensitivity and systematic error requirements?; and 5) what are the specific mission architecture parameters, including cost? Detailed answers to these questions are contained in this report.

  7. Geodetic imaging of tectonic deformation with InSAR

    NASA Astrophysics Data System (ADS)

    Fattahi, Heresh

    Precise measurements of ground deformation across the plate boundaries are crucial observations to evaluate the location of strain localization and to understand the pattern of strain accumulation at depth. Such information can be used to evaluate the possible location and magnitude of future earthquakes. Interferometric Synthetic Aperture Radar (InSAR) potentially can deliver small-scale (few mm/yr) ground displacement over long distances (hundreds of kilometers) across the plate boundaries and over continents. However, Given the ground displacement as our signal of interest, the InSAR observations of ground deformation are usually affected by several sources of systematic and random noises. In this dissertation I identify several sources of systematic and random noise, develop new methods to model and mitigate the systematic noise and to evaluate the uncertainty of the ground displacement measured with InSAR. I use the developed approach to characterize the tectonic deformation and evaluate the rate of strain accumulation along the Chaman fault system, the western boundary of the India with Eurasia tectonic plates. I evaluate the bias due to the topographic residuals in the InSAR range-change time-series and develope a new method to estimate the topographic residuals and mitigate the effect from the InSAR range-change time-series (Chapter 2). I develop a new method to evaluate the uncertainty of the InSAR velocity field due to the uncertainty of the satellite orbits (Chapter 3) and a new algorithm to automatically detect and correct the phase unwrapping errors in a dense network of interferograms (Chapter 4). I develop a new approach to evaluate the impact of systematic and stochastic components of the tropospheric delay on the InSAR displacement time-series and its uncertainty (Chapter 5). Using the new InSAR time-series approach developed in the previous chapters, I study the tectonic deformation across the western boundary of the India plate with Eurasia and evaluated the rate of strain accumulation along the Chaman fault system (Chapter 5). I also evaluate the co-seismic and post-seismic displacement of a moderate M5.5 earthquake on the Ghazaband fault (Chapter 6). The developed methods to mitigate the systematic noise from InSAR time-series, significantly improve the accuracy of the InSAR displacement time-series and velocity. The approaches to evaluate the effect of the stochastic components of noise in InSAR displacement time-series enable us to obtain the variance-covariance matrix of the InSAR displacement time-series and to express their uncertainties. The effect of the topographic residuals in the InSAR range-change time-series is proportional to the perpendicular baseline history of the set of SAR acquisitions. The proposed method for topographic residual correction, efficiently corrects the displacement time-series. Evaluation of the uncertainty of velocity due to the orbital errors shows that for modern SAR satellites with precise orbits such as TerraSAR-X and Sentinel-1, the uncertainty of 0.2 mm/yr per 100 km and for older satellites with less accurate orbits such as ERS and Envisat, the uncertainty of 1.5 and 0.5mm/yr per 100 km, respectively are achievable. However, the uncertainty due to the orbital errors depends on the orbital uncertainties, the number and time span of SAR acquisitions. Contribution of the tropospheric delay to the InSAR range-change time-series can be subdivided to systematic (seasonal delay) and stochastic components. The systematic component biases the displacement times-series and velocity field as a function of the acquisition time and the non-seasonal component significantly contributes to the InSAR uncertainty. Both components are spatially correlated and therefore the covariance of noise between pixels should be considered for evaluating the uncertainty due to the random tropospheric delay. The relative velocity uncertainty due to the random tropospheric delay depends on the scatter of the random tropospheric delay, and is inversely proportional to the number of acquisitions, and the total time span covered by the SAR acquisitions. InSAR observations across the Chaman fault system shows that relative motion between India and Eurasia in the western boundary is distributed among different faults. The InSAR velocity field indicates strain localization on the Chaman fault and Ghazaband fault with slip rates of ~8 and ~16 mm/yr, respectively. High rate of strain accumulation on the Ghazaband fault and lack of evidence for rupturing the fault during the 1935 Quetta earthquake indicates that enough strain has been accumulated for large (M>7) earthquake, which threatens Balochistan and the City of Quetta. Chaman fault from latitudes ~29.5 N to ~32.5 N is creeping with a maximum surface creep rate of 8 mm/yr, which indicates that Chaman fault is only partially locked and therefore moderate earthquakes (M<7) similar to what has been recorded in last 100 years are expected.

  8. MAX-DOAS measurements of HONO slant column densities during the MAD-CAT campaign: inter-comparison, sensitivity studies on spectral analysis settings, and error budget

    NASA Astrophysics Data System (ADS)

    Wang, Yang; Beirle, Steffen; Hendrick, Francois; Hilboll, Andreas; Jin, Junli; Kyuberis, Aleksandra A.; Lampel, Johannes; Li, Ang; Luo, Yuhan; Lodi, Lorenzo; Ma, Jianzhong; Navarro, Monica; Ortega, Ivan; Peters, Enno; Polyansky, Oleg L.; Remmers, Julia; Richter, Andreas; Puentedura, Olga; Van Roozendael, Michel; Seyler, André; Tennyson, Jonathan; Volkamer, Rainer; Xie, Pinhua; Zobov, Nikolai F.; Wagner, Thomas

    2017-10-01

    In order to promote the development of the passive DOAS technique the Multi Axis DOAS - Comparison campaign for Aerosols and Trace gases (MAD-CAT) was held at the Max Planck Institute for Chemistry in Mainz, Germany, from June to October 2013. Here, we systematically compare the differential slant column densities (dSCDs) of nitrous acid (HONO) derived from measurements of seven different instruments. We also compare the tropospheric difference of SCDs (delta SCD) of HONO, namely the difference of the SCDs for the non-zenith observations and the zenith observation of the same elevation sequence. Different research groups analysed the spectra from their own instruments using their individual fit software. All the fit errors of HONO dSCDs from the instruments with cooled large-size detectors are mostly in the range of 0.1 to 0.3 × 1015 molecules cm-2 for an integration time of 1 min. The fit error for the mini MAX-DOAS is around 0.7 × 1015 molecules cm-2. Although the HONO delta SCDs are normally smaller than 6 × 1015 molecules cm-2, consistent time series of HONO delta SCDs are retrieved from the measurements of different instruments. Both fits with a sequential Fraunhofer reference spectrum (FRS) and a daily noon FRS lead to similar consistency. Apart from the mini-MAX-DOAS, the systematic absolute differences of HONO delta SCDs between the instruments are smaller than 0.63 × 1015 molecules cm-2. The correlation coefficients are higher than 0.7 and the slopes of linear regressions deviate from unity by less than 16 % for the elevation angle of 1°. The correlations decrease with an increase in elevation angle. All the participants also analysed synthetic spectra using the same baseline DOAS settings to evaluate the systematic errors of HONO results from their respective fit programs. In general the errors are smaller than 0.3 × 1015 molecules cm-2, which is about half of the systematic difference between the real measurements.The differences of HONO delta SCDs retrieved in the selected three spectral ranges 335-361, 335-373 and 335-390 nm are considerable (up to 0.57 × 1015 molecules cm-2) for both real measurements and synthetic spectra. We performed sensitivity studies to quantify the dominant systematic error sources and to find a recommended DOAS setting in the three spectral ranges. The results show that water vapour absorption, temperature and wavelength dependence of O4 absorption, temperature dependence of Ring spectrum, and polynomial and intensity offset correction all together dominate the systematic errors. We recommend a fit range of 335-373 nm for HONO retrievals. In such fit range the overall systematic uncertainty is about 0.87 × 1015 molecules cm-2, much smaller than those in the other two ranges. The typical random uncertainty is estimated to be about 0.16 × 1015 molecules cm-2, which is only 25 % of the total systematic uncertainty for most of the instruments in the MAD-CAT campaign. In summary for most of the MAX-DOAS instruments for elevation angle below 5°, half daytime measurements (usually in the morning) of HONO delta SCD can be over the detection limit of 0.2 × 1015 molecules cm-2 with an uncertainty of ˜ 0.9 × 1015 molecules cm-2.

  9. The Role of Supralexical Prosodic Units in Speech Production: Evidence from the Distribution of Speech Errors

    ERIC Educational Resources Information Center

    Choe, Wook Kyung

    2013-01-01

    The current dissertation represents one of the first systematic studies of the distribution of speech errors within supralexical prosodic units. Four experiments were conducted to gain insight into the specific role of these units in speech planning and production. The first experiment focused on errors in adult English. These were found to be…

  10. Detecting Climate Variability in Tropical Rainfall

    NASA Astrophysics Data System (ADS)

    Berg, W.

    2004-05-01

    A number of satellite and merged satellite/in-situ rainfall products have been developed extending as far back as 1979. While the availability of global rainfall data covering over two decades and encompassing two major El Niño events is a valuable resource for a variety of climate studies, significant differences exist between many of these products. Unfortunately, issues such as availability often determine the use of a product for a given application instead of an understanding of the strengths and weaknesses of the various products. Significant efforts have been made to address the impact of sparse sampling by satellite sensors of variable rainfall processes by merging various satellite and in-situ rainfall products. These combine high spatial and temporal frequency satellite infrared data with higher quality passive microwave observations and rain gauge observations. Combining such an approach with spatial and temporal averaging of the data can reduce the large random errors inherent in satellite rainfall estimates to very small levels. Unfortunately, systematic biases can and do result in artificial climate signals due to the underconstrained nature of the rainfall retrieval problem. Because all satellite retrieval algorithms make assumptions regarding the cloud structure and microphysical properties, systematic changes in these assumed parameters between regions and/or times results in regional and/or temporal biases in the rainfall estimates. These biases tend to be relatively small compared to random errors in the retrieval, however, when random errors are reduced through spatial and temporal averaging for climate applications, they become the dominant source of error. Whether or not such biases impact the results for climate studies is very much dependent on the application. For example, all of the existing satellite rainfall products capture the increased rainfall in the east Pacific associated with El Niño, however, the resulting tropical response to El Niño is substantially smaller due to decreased rainfall in the west Pacific partially canceling increases in the central and east Pacific. These differences are not limited to the long-term merged rainfall products using infrared data, but are also exist in state-of-the-art rainfall retrievals from the active and passive microwave sensors on board the Tropical Rainfall Measuring Mission (TRMM). For example, large differences exist in the response of tropical mean rainfall retrieved from the TRMM microwave imager (TMI) 2A12 algorithm and the precipitation radar (PR) 2A25 algorithm to the 1997/98 El Niño. To assist scientists attempting to wade through the vast array of climate rainfall products currently available, and to help them determine whether systematic biases in these rainfall products impact the conclusions of a given study, we have developed a Climate Rainfall Data Center (CRDC). The CRDC web site (rain.atmos.colostate.edu/CRDC) provides climate researchers information on the various rainfall datasets available as well as access to experts in the field of satellite rainfall retrievals to assist them in the appropriate selection and use of climate rainfall products.

  11. A geometric model for initial orientation errors in pigeon navigation.

    PubMed

    Postlethwaite, Claire M; Walker, Michael M

    2011-01-21

    All mobile animals respond to gradients in signals in their environment, such as light, sound, odours and magnetic and electric fields, but it remains controversial how they might use these signals to navigate over long distances. The Earth's surface is essentially two-dimensional, so two stimuli are needed to act as coordinates for navigation. However, no environmental fields are known to be simple enough to act as perpendicular coordinates on a two-dimensional grid. Here, we propose a model for navigation in which we assume that an animal has a simplified 'cognitive map' in which environmental stimuli act as perpendicular coordinates. We then investigate how systematic deviation of the contour lines of the environmental signals from a simple orthogonal arrangement can cause errors in position determination and lead to systematic patterns of directional errors in initial homing directions taken by pigeons. The model reproduces patterns of initial orientation errors seen in previously collected data from homing pigeons, predicts that errors should increase with distance from the loft, and provides a basis for efforts to identify further sources of orientation errors made by homing pigeons. Copyright © 2010 Elsevier Ltd. All rights reserved.

  12. Systematic Error in Leaf Water Potential Measurements with a Thermocouple Psychrometer.

    PubMed

    Rawlins, S L

    1964-10-30

    To allow for the error in measurement of water potentials in leaves, introduced by the presence of a water droplet in the chamber of the psychrometer, a correction must be made for the permeability of the leaf.

  13. Quantifying the burden of opioid medication errors in adult oncology and palliative care settings: A systematic review.

    PubMed

    Heneka, Nicole; Shaw, Tim; Rowett, Debra; Phillips, Jane L

    2016-06-01

    Opioids are the primary pharmacological treatment for cancer pain and, in the palliative care setting, are routinely used to manage symptoms at the end of life. Opioids are one of the most frequently reported drug classes in medication errors causing patient harm. Despite their widespread use, little is known about the incidence and impact of opioid medication errors in oncology and palliative care settings. To determine the incidence, types and impact of reported opioid medication errors in adult oncology and palliative care patient settings. A systematic review. Five electronic databases and the grey literature were searched from 1980 to August 2014. Empirical studies published in English, reporting data on opioid medication error incidence, types or patient impact, within adult oncology and/or palliative care services, were included. Popay's narrative synthesis approach was used to analyse data. Five empirical studies were included in this review. Opioid error incidence rate was difficult to ascertain as each study focussed on a single narrow area of error. The predominant error type related to deviation from opioid prescribing guidelines, such as incorrect dosing intervals. None of the included studies reported the degree of patient harm resulting from opioid errors. This review has highlighted the paucity of the literature examining opioid error incidence, types and patient impact in adult oncology and palliative care settings. Defining, identifying and quantifying error reporting practices for these populations should be an essential component of future oncology and palliative care quality and safety initiatives. © The Author(s) 2015.

  14. Systematic review of the evidence for Trails B cut-off scores in assessing fitness-to-drive.

    PubMed

    Roy, Mononita; Molnar, Frank

    2013-01-01

    Fitness-to-drive guidelines recommend employing the Trail Making B Test (a.k.a. Trails B), but do not provide guidance regarding cut-off scores. There is ongoing debate regarding the optimal cut-off score on the Trails B test. The objective of this study was to address this controversy by systematically reviewing the evidence for specific Trails B cut-off scores (e.g., cut-offs in both time to completion and number of errors) with respect to fitness-to-drive. Systematic review of all prospective cohort, retrospective cohort, case-control, correlation, and cross-sectional studies reporting the ability of the Trails B to predict driving safety that were published in English-language, peer-reviewed journals. Forty-seven articles were reviewed. None of the articles justified sample sizes via formal calculations. Cut-off scores reported based on research include: 90 seconds, 133 seconds, 147 seconds, 180 seconds, and < 3 errors. There is support for the previously published Trails B cut-offs of 3 minutes or 3 errors (the '3 or 3 rule'). Major methodological limitations of this body of research were uncovered including (1) lack of justification of sample size leaving studies open to Type II error (i.e., false negative findings), and (2) excessive focus on associations rather than clinically useful cut-off scores.

  15. LOGISTIC FUNCTION PROFILE FIT: A least-squares program for fitting interface profiles to an extended logistic function

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kirchhoff, William H.

    2012-09-15

    The extended logistic function provides a physically reasonable description of interfaces such as depth profiles or line scans of surface topological or compositional features. It describes these interfaces with the minimum number of parameters, namely, position, width, and asymmetry. Logistic Function Profile Fit (LFPF) is a robust, least-squares fitting program in which the nonlinear extended logistic function is linearized by a Taylor series expansion (equivalent to a Newton-Raphson approach) with no apparent introduction of bias in the analysis. The program provides reliable confidence limits for the parameters when systematic errors are minimal and provides a display of the residuals frommore » the fit for the detection of systematic errors. The program will aid researchers in applying ASTM E1636-10, 'Standard practice for analytically describing sputter-depth-profile and linescan-profile data by an extended logistic function,' and may also prove useful in applying ISO 18516: 2006, 'Surface chemical analysis-Auger electron spectroscopy and x-ray photoelectron spectroscopy-determination of lateral resolution.' Examples are given of LFPF fits to a secondary ion mass spectrometry depth profile, an Auger surface line scan, and synthetic data generated to exhibit known systematic errors for examining the significance of such errors to the extrapolation of partial profiles.« less

  16. The effect of rainfall measurement uncertainties on rainfall-runoff processes modelling.

    PubMed

    Stransky, D; Bares, V; Fatka, P

    2007-01-01

    Rainfall data are a crucial input for various tasks concerning the wet weather period. Nevertheless, their measurement is affected by random and systematic errors that cause an underestimation of the rainfall volume. Therefore, the general objective of the presented work was to assess the credibility of measured rainfall data and to evaluate the effect of measurement errors on urban drainage modelling tasks. Within the project, the methodology of the tipping bucket rain gauge (TBR) was defined and assessed in terms of uncertainty analysis. A set of 18 TBRs was calibrated and the results were compared to the previous calibration. This enables us to evaluate the ageing of TBRs. A propagation of calibration and other systematic errors through the rainfall-runoff model was performed on experimental catchment. It was found that the TBR calibration is important mainly for tasks connected with the assessment of peak values and high flow durations. The omission of calibration leads to up to 30% underestimation and the effect of other systematic errors can add a further 15%. The TBR calibration should be done every two years in order to catch up the ageing of TBR mechanics. Further, the authors recommend to adjust the dynamic test duration proportionally to generated rainfall intensity.

  17. Chiral extrapolation of the leading hadronic contribution to the muon anomalous magnetic moment

    NASA Astrophysics Data System (ADS)

    Golterman, Maarten; Maltman, Kim; Peris, Santiago

    2017-04-01

    A lattice computation of the leading-order hadronic contribution to the muon anomalous magnetic moment can potentially help reduce the error on the Standard Model prediction for this quantity, if sufficient control of all systematic errors affecting such a computation can be achieved. One of these systematic errors is that associated with the extrapolation to the physical pion mass from values on the lattice larger than the physical pion mass. We investigate this extrapolation assuming lattice pion masses in the range of 200 to 400 MeV with the help of two-loop chiral perturbation theory, and we find that such an extrapolation is unlikely to lead to control of this systematic error at the 1% level. This remains true even if various tricks to improve the reliability of the chiral extrapolation employed in the literature are taken into account. In addition, while chiral perturbation theory also predicts the dependence on the pion mass of the leading-order hadronic contribution to the muon anomalous magnetic moment as the chiral limit is approached, this prediction turns out to be of no practical use because the physical pion mass is larger than the muon mass that sets the scale for the onset of this behavior.

  18. Quotation accuracy in medical journal articles-a systematic review and meta-analysis.

    PubMed

    Jergas, Hannah; Baethge, Christopher

    2015-01-01

    Background. Quotations and references are an indispensable element of scientific communication. They should support what authors claim or provide important background information for readers. Studies indicate, however, that quotations not serving their purpose-quotation errors-may be prevalent. Methods. We carried out a systematic review, meta-analysis and meta-regression of quotation errors, taking account of differences between studies in error ascertainment. Results. Out of 559 studies screened we included 28 in the main analysis, and estimated major, minor and total quotation error rates of 11,9%, 95% CI [8.4, 16.6] 11.5% [8.3, 15.7], and 25.4% [19.5, 32.4]. While heterogeneity was substantial, even the lowest estimate of total quotation errors was considerable (6.7%). Indirect references accounted for less than one sixth of all quotation problems. The findings remained robust in a number of sensitivity and subgroup analyses (including risk of bias analysis) and in meta-regression. There was no indication of publication bias. Conclusions. Readers of medical journal articles should be aware of the fact that quotation errors are common. Measures against quotation errors include spot checks by editors and reviewers, correct placement of citations in the text, and declarations by authors that they have checked cited material. Future research should elucidate if and to what degree quotation errors are detrimental to scientific progress.

  19. Outcomes of a Failure Mode and Effects Analysis for medication errors in pediatric anesthesia.

    PubMed

    Martin, Lizabeth D; Grigg, Eliot B; Verma, Shilpa; Latham, Gregory J; Rampersad, Sally E; Martin, Lynn D

    2017-06-01

    The Institute of Medicine has called for development of strategies to prevent medication errors, which are one important cause of preventable harm. Although the field of anesthesiology is considered a leader in patient safety, recent data suggest high medication error rates in anesthesia practice. Unfortunately, few error prevention strategies for anesthesia providers have been implemented. Using Toyota Production System quality improvement methodology, a multidisciplinary team observed 133 h of medication practice in the operating room at a tertiary care freestanding children's hospital. A failure mode and effects analysis was conducted to systematically deconstruct and evaluate each medication handling process step and score possible failure modes to quantify areas of risk. A bundle of five targeted countermeasures were identified and implemented over 12 months. Improvements in syringe labeling (73 to 96%), standardization of medication organization in the anesthesia workspace (0 to 100%), and two-provider infusion checks (23 to 59%) were observed. Medication error reporting improved during the project and was subsequently maintained. After intervention, the median medication error rate decreased from 1.56 to 0.95 per 1000 anesthetics. The frequency of medication error harm events reaching the patient also decreased. Systematic evaluation and standardization of medication handling processes by anesthesia providers in the operating room can decrease medication errors and improve patient safety. © 2017 John Wiley & Sons Ltd.

  20. Wavefront-Error Performance Characterization for the James Webb Space Telescope (JWST) Integrated Science Instrument Module (ISIM) Science Instruments

    NASA Technical Reports Server (NTRS)

    Aronstein, David L.; Smith, J. Scott; Zielinski, Thomas P.; Telfer, Randal; Tournois, Severine C.; Moore, Dustin B.; Fienup, James R.

    2016-01-01

    The science instruments (SIs) comprising the James Webb Space Telescope (JWST) Integrated Science Instrument Module (ISIM) were tested in three cryogenic-vacuum test campaigns in the NASA Goddard Space Flight Center (GSFC)'s Space Environment Simulator (SES). In this paper, we describe the results of optical wavefront-error performance characterization of the SIs. The wavefront error is determined using image-based wavefront sensing (also known as phase retrieval), and the primary data used by this process are focus sweeps, a series of images recorded by the instrument under test in its as-used configuration, in which the focal plane is systematically changed from one image to the next. High-precision determination of the wavefront error also requires several sources of secondary data, including 1) spectrum, apodization, and wavefront-error characterization of the optical ground-support equipment (OGSE) illumination module, called the OTE Simulator (OSIM), 2) plate scale measurements made using a Pseudo-Nonredundant Mask (PNRM), and 3) pupil geometry predictions as a function of SI and field point, which are complicated because of a tricontagon-shaped outer perimeter and small holes that appear in the exit pupil due to the way that different light sources are injected into the optical path by the OGSE. One set of wavefront-error tests, for the coronagraphic channel of the Near-Infrared Camera (NIRCam) Longwave instruments, was performed using data from transverse translation diversity sweeps instead of focus sweeps, in which a sub-aperture is translated andor rotated across the exit pupil of the system.Several optical-performance requirements that were verified during this ISIM-level testing are levied on the uncertainties of various wavefront-error-related quantities rather than on the wavefront errors themselves. This paper also describes the methodology, based on Monte Carlo simulations of the wavefront-sensing analysis of focus-sweep data, used to establish the uncertainties of the wavefront error maps.

  1. Wavefront-Error Performance Characterization for the James Webb Space Telescope (JWST) Integrated Science Instrument Module (ISIM) Science Instruments

    NASA Technical Reports Server (NTRS)

    Aronstein, David L.; Smith, J. Scott; Zielinski, Thomas P.; Telfer, Randal; Tournois, Severine C.; Moore, Dustin B.; Fienup, James R.

    2016-01-01

    The science instruments (SIs) comprising the James Webb Space Telescope (JWST) Integrated Science Instrument Module (ISIM) were tested in three cryogenic-vacuum test campaigns in the NASA Goddard Space Flight Center (GSFC)'s Space Environment Simulator (SES) test chamber. In this paper, we describe the results of optical wavefront-error performance characterization of the SIs. The wavefront error is determined using image-based wavefront sensing, and the primary data used by this process are focus sweeps, a series of images recorded by the instrument under test in its as-used configuration, in which the focal plane is systematically changed from one image to the next. High-precision determination of the wavefront error also requires several sources of secondary data, including 1) spectrum, apodization, and wavefront-error characterization of the optical ground-support equipment (OGSE) illumination module, called the OTE Simulator (OSIM), 2) F-number and pupil-distortion measurements made using a pseudo-nonredundant mask (PNRM), and 3) pupil geometry predictions as a function of SI and field point, which are complicated because of a tricontagon-shaped outer perimeter and small holes that appear in the exit pupil due to the way that different light sources are injected into the optical path by the OGSE. One set of wavefront-error tests, for the coronagraphic channel of the Near-Infrared Camera (NIRCam) Longwave instruments, was performed using data from transverse translation diversity sweeps instead of focus sweeps, in which a sub-aperture is translated and/or rotated across the exit pupil of the system. Several optical-performance requirements that were verified during this ISIM-level testing are levied on the uncertainties of various wavefront-error-related quantities rather than on the wavefront errors themselves. This paper also describes the methodology, based on Monte Carlo simulations of the wavefront-sensing analysis of focus-sweep data, used to establish the uncertainties of the wavefront-error maps.

  2. Specificity of reliable change models and review of the within-subjects standard deviation as an error term.

    PubMed

    Hinton-Bayre, Anton D

    2011-02-01

    There is an ongoing debate over the preferred method(s) for determining the reliable change (RC) in individual scores over time. In the present paper, specificity comparisons of several classic and contemporary RC models were made using a real data set. This included a more detailed review of a new RC model recently proposed in this journal, that used the within-subjects standard deviation (WSD) as the error term. It was suggested that the RC(WSD) was more sensitive to change and theoretically superior. The current paper demonstrated that even in the presence of mean practice effects, false-positive rates were comparable across models when reliability was good and initial and retest variances were equivalent. However, when variances differed, discrepancies in classification across models became evident. Notably, the RC using the WSD provided unacceptably high false-positive rates in this setting. It was considered that the WSD was never intended for measuring change in this manner. The WSD actually combines systematic and error variance. The systematic variance comes from measurable between-treatment differences, commonly referred to as practice effect. It was further demonstrated that removal of the systematic variance and appropriate modification of the residual error term for the purpose of testing individual change yielded an error term already published and criticized in the literature. A consensus on the RC approach is needed. To that end, further comparison of models under varied conditions is encouraged.

  3. Estimating Climatological Bias Errors for the Global Precipitation Climatology Project (GPCP)

    NASA Technical Reports Server (NTRS)

    Adler, Robert; Gu, Guojun; Huffman, George

    2012-01-01

    A procedure is described to estimate bias errors for mean precipitation by using multiple estimates from different algorithms, satellite sources, and merged products. The Global Precipitation Climatology Project (GPCP) monthly product is used as a base precipitation estimate, with other input products included when they are within +/- 50% of the GPCP estimates on a zonal-mean basis (ocean and land separately). The standard deviation s of the included products is then taken to be the estimated systematic, or bias, error. The results allow one to examine monthly climatologies and the annual climatology, producing maps of estimated bias errors, zonal-mean errors, and estimated errors over large areas such as ocean and land for both the tropics and the globe. For ocean areas, where there is the largest question as to absolute magnitude of precipitation, the analysis shows spatial variations in the estimated bias errors, indicating areas where one should have more or less confidence in the mean precipitation estimates. In the tropics, relative bias error estimates (s/m, where m is the mean precipitation) over the eastern Pacific Ocean are as large as 20%, as compared with 10%-15% in the western Pacific part of the ITCZ. An examination of latitudinal differences over ocean clearly shows an increase in estimated bias error at higher latitudes, reaching up to 50%. Over land, the error estimates also locate regions of potential problems in the tropics and larger cold-season errors at high latitudes that are due to snow. An empirical technique to area average the gridded errors (s) is described that allows one to make error estimates for arbitrary areas and for the tropics and the globe (land and ocean separately, and combined). Over the tropics this calculation leads to a relative error estimate for tropical land and ocean combined of 7%, which is considered to be an upper bound because of the lack of sign-of-the-error canceling when integrating over different areas with a different number of input products. For the globe the calculated relative error estimate from this study is about 9%, which is also probably a slight overestimate. These tropical and global estimated bias errors provide one estimate of the current state of knowledge of the planet's mean precipitation.

  4. WE-AB-207B-03: A Computational Methodology for Determination of CTV-To-PTV Margins with Inter Fractional Shape Variations Based On a Statistical Point Distribution Model for Prostate Cancer Radiation Therapy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shibayama, Y; Umezu, Y; Nakamura, Y

    2016-06-15

    Purpose: Our assumption was that interfractional shape variations of target volumes could not be negligible for determination of clinical target volume (CTV)-to-planning target volume (PTV) margins. The aim of this study was to investigate this assumption as a simulation study by developing a computational framework of CTV-to-PTV margins with taking the interfractional shape variations into account based on point distribution model (PDM) Methods: The systematic and random errors for interfractional shape variations and translations of target volumes were evaluated for four types of CTV regions (only a prostate, a prostate plus proximal 1-cm seminal vesicles, a prostate plus proximal 2-cmmore » seminal vesicles, and a prostate plus whole seminal vesicles). The CTV regions were delineated depending on prostate cancer risk groups on planning computed tomography (CT) and cone beam CT (CBCT) images of 73 fractions of 10 patients. The random and systematic errors for shape variations of CTV regions were derived from PDMs of CTV surfaces for all fractions of each patient. Systematic errors of shape variations of CTV regions were derived by comparing PDMs between planning CTV surfaces and average CTV surfaces. Finally, anisotropic CTV-to-PTV margins with shape variations in 6 directions (anterior, posterior, superior, inferior, right, and left) were computed by using a van Herk margin formula. Results: Differences between CTV-to-PTV margins with and without shape variations ranged from 0.7 to 1.7 mm in anterior direction, 1.0 to 2.8 mm in posterior direction, 0.8 to 2.8 mm in superior direction, 0.6 to 1.6 mm in inferior direction, 1.4 to 4.4 mm in right direction, and 1.3 to 5.2 mm in left direction. Conclusion: More than 1.0 mm additional margins were needed at least in 3 directions to guarantee CTV coverage due to shape variations. Therefore, shape variations should be taken into account for the determination of CTV-to-PTV margins.« less

  5. A proposed method to investigate reliability throughout a questionnaire.

    PubMed

    Wentzel-Larsen, Tore; Norekvål, Tone M; Ulvik, Bjørg; Nygård, Ottar; Pripp, Are H

    2011-10-05

    Questionnaires are used extensively in medical and health care research and depend on validity and reliability. However, participants may differ in interest and awareness throughout long questionnaires, which can affect reliability of their answers. A method is proposed for "screening" of systematic change in random error, which could assess changed reliability of answers. A simulation study was conducted to explore whether systematic change in reliability, expressed as changed random error, could be assessed using unsupervised classification of subjects by cluster analysis (CA) and estimation of intraclass correlation coefficient (ICC). The method was also applied on a clinical dataset from 753 cardiac patients using the Jalowiec Coping Scale. The simulation study showed a relationship between the systematic change in random error throughout a questionnaire and the slope between the estimated ICC for subjects classified by CA and successive items in a questionnaire. This slope was proposed as an awareness measure--to assessing if respondents provide only a random answer or one based on a substantial cognitive effort. Scales from different factor structures of Jalowiec Coping Scale had different effect on this awareness measure. Even though assumptions in the simulation study might be limited compared to real datasets, the approach is promising for assessing systematic change in reliability throughout long questionnaires. Results from a clinical dataset indicated that the awareness measure differed between scales.

  6. Range camera on conveyor belts: estimating size distribution and systematic errors due to occlusion

    NASA Astrophysics Data System (ADS)

    Blomquist, Mats; Wernersson, Ake V.

    1999-11-01

    When range cameras are used for analyzing irregular material on a conveyor belt there will be complications like missing segments caused by occlusion. Also, a number of range discontinuities will be present. In a frame work towards stochastic geometry, conditions are found for the cases when range discontinuities take place. The test objects in this paper are pellets for the steel industry. An illuminating laser plane will give range discontinuities at the edges of each individual object. These discontinuities are used to detect and measure the chord created by the intersection of the laser plane and the object. From the measured chords we derive the average diameter and its variance. An improved method is to use a pair of parallel illuminating light planes to extract two chords. The estimation error for this method is not larger than the natural shape fluctuations (the difference in diameter) for the pellets. The laser- camera optronics is sensitive enough both for material on a conveyor belt and free falling material leaving the conveyor.

  7. HIPS: A new hippocampus subfield segmentation method.

    PubMed

    Romero, José E; Coupé, Pierrick; Manjón, José V

    2017-12-01

    The importance of the hippocampus in the study of several neurodegenerative diseases such as Alzheimer's disease makes it a structure of great interest in neuroimaging. However, few segmentation methods have been proposed to measure its subfields due to its complex structure and the lack of high resolution magnetic resonance (MR) data. In this work, we present a new pipeline for automatic hippocampus subfield segmentation using two available hippocampus subfield delineation protocols that can work with both high and standard resolution data. The proposed method is based on multi-atlas label fusion technology that benefits from a novel multi-contrast patch match search process (using high resolution T1-weighted and T2-weighted images). The proposed method also includes as post-processing a new neural network-based error correction step to minimize systematic segmentation errors. The method has been evaluated on both high and standard resolution images and compared to other state-of-the-art methods showing better results in terms of accuracy and execution time. Copyright © 2017 Elsevier Inc. All rights reserved.

  8. Precise Lamb Shift Measurements in Hydrogen-Like Heavy Ions—Status and Perspectives

    NASA Astrophysics Data System (ADS)

    Andrianov, V.; Beckert, K.; Bleile, A.; Chatterjee, Ch.; Echler, A.; Egelhof, P.; Gumberidze, A.; Ilieva, S.; Kiselev, O.; Kilbourne, C.; Kluge, H.-J.; Kraft-Bermuth, S.; McCammon, D.; Meier, J. P.; Reuschl, R.; Stöhlker, T.; Trassinelli, M.

    2009-12-01

    The precise determination of the energy of the Lyman α1 and α2 lines in hydrogen-like heavy ions provides a sensitive test of quantum electrodynamics in very strong Coulomb fields. For the first time, a calorimetric low-temperature detector was applied in an experiment to precisely determine the transition energy of the Lyman lines of lead ions 207Pb81+ at the Experimental Storage Ring (ESR) at GSI. The detectors consist of silicon thermistors, provided by the NASA/Goddard Space Flight Center, and Pb or Sn absorbers to obtain high quantum efficiency in the energy range of 40-80 keV, where the Doppler-shifted Lyman lines are located. The measured energy of the Lyman α1 line, E(Ly-α1, 207Pb81+) = (77937±12stat±23syst) eV, agrees within errors with theoretical predictions. The systematic error is mainly due to uncertainties in the non-linear energy calibration of the detectors as well as the relative position of detector and gas-jet target.

  9. Medición de posiciones astrométricas con CCD en la zona de Rup 21

    NASA Astrophysics Data System (ADS)

    Bustos Fierro, I. H.; Calderón, J. H.

    It is shown the utilization of the block adjustment method for the measurement of astrometric positions from a mosaic of sixteen CCD images with partial overlap, which were taken with the Telescope Jorge Sahade of CASLEO. The observations cover an area of 25' x 25' around the open cluster Rup21. The source of reference positions was ACT Reference Catalog. The internal error of the measured positions is analyzed, and the external error is estimated from the comparison with the catalog USNO-A. In this comparison it is found that the direct CCD images taken with focal reducer could be distorted by severe field curvature. The effect of the distortion presumably introduced by the optics is eliminated with the suitable corrections of the stellar positions measured on every frame, but a new systematic effect on scales of the entire field is observed, which could be due to the distribution of the reference stars.

  10. Global Warming Estimation from MSU: Correction for Drift and Calibration Errors

    NASA Technical Reports Server (NTRS)

    Prabhakara, C.; Iacovazzi, R., Jr.; Yoo, J.-M.; Einaudi, Franco (Technical Monitor)

    2000-01-01

    Microwave Sounding Unit (MSU) radiometer observations in Ch 2 (53.74 GHz), made in the nadir direction from sequential, sun-synchronous, polar-orbiting NOAA morning satellites (NOAA 6, 10 and 12 that have about 7am/7pm orbital geometry) and afternoon satellites (NOAA 7, 9, 11 and 14 that have about 2am/2pm orbital geometry) are analyzed in this study to derive global temperature trend from 1980 to 1998. In order to remove the discontinuities between the data of the successive satellites and to get a continuous time series, first we have used shortest possible time record of each satellite. In this way we get a preliminary estimate of the global temperature trend of 0.21 K/decade. However, this estimate is affected by systematic time-dependent errors. One such error is the instrument calibration error. This error can be inferred whenever there are overlapping measurements made by two satellites over an extended period of time. From the available successive satellite data we have taken the longest possible time record of each satellite to form the time series during the period 1980 to 1998 to this error. We find we can decrease the global temperature trend by about 0.07 K/decade. In addition there are systematic time dependent errors present in the data that are introduced by the drift in the satellite orbital geometry arises from the diurnal cycle in temperature which is the drift related change in the calibration of the MSU. In order to analyze the nature of these drift related errors the multi-satellite Ch 2 data set is partitioned into am and pm subsets to create two independent time series. The error can be assessed in the am and pm data of Ch 2 on land and can be eliminated. Observations made in the MSU Ch 1 (50.3 GHz) support this approach. The error is obvious only in the difference between the pm and am observations of Ch 2 over the ocean. We have followed two different paths to assess the impact of the errors on the global temperature trend. In one path the entire error is placed in the am data while in the other it is placed in the pm data. Global temperature trend is increased or decreased by about 0.03 K/decade depending upon this placement. Taking into account all random errors and systematic errors our analysis of MSU observations leads us to conclude that a conservative estimate of the global warming is 0. 11 (+-) 0.04 K/decade during 1980 to 1998.

  11. Probabilistic global maps of the CO2 column at daily and monthly scales from sparse satellite measurements

    NASA Astrophysics Data System (ADS)

    Chevallier, Frédéric; Broquet, Grégoire; Pierangelo, Clémence; Crisp, David

    2017-07-01

    The column-average dry air-mole fraction of carbon dioxide in the atmosphere (XCO2) is measured by scattered satellite measurements like those from the Orbiting Carbon Observatory (OCO-2). We show that global continuous maps of XCO2 (corresponding to level 3 of the satellite data) at daily or coarser temporal resolution can be inferred from these data with a Kalman filter built on a model of persistence. Our application of this approach on 2 years of OCO-2 retrievals indicates that the filter provides better information than a climatology of XCO2 at both daily and monthly scales. Provided that the assigned observation uncertainty statistics are tuned in each grid cell of the XCO2 maps from an objective method (based on consistency diagnostics), the errors predicted by the filter at daily and monthly scales represent the true error statistics reasonably well, except for a bias in the high latitudes of the winter hemisphere and a lack of resolution (i.e., a too small discrimination skill) of the predicted error standard deviations. Due to the sparse satellite sampling, the broad-scale patterns of XCO2 described by the filter seem to lag behind the real signals by a few weeks. Finally, the filter offers interesting insights into the quality of the retrievals, both in terms of random and systematic errors.

  12. Moisture Forecast Bias Correction in GEOS DAS

    NASA Technical Reports Server (NTRS)

    Dee, D.

    1999-01-01

    Data assimilation methods rely on numerous assumptions about the errors involved in measuring and forecasting atmospheric fields. One of the more disturbing of these is that short-term model forecasts are assumed to be unbiased. In case of atmospheric moisture, for example, observational evidence shows that the systematic component of errors in forecasts and analyses is often of the same order of magnitude as the random component. we have implemented a sequential algorithm for estimating forecast moisture bias from rawinsonde data in the Goddard Earth Observing System Data Assimilation System (GEOS DAS). The algorithm is designed to remove the systematic component of analysis errors and can be easily incorporated in an existing statistical data assimilation system. We will present results of initial experiments that show a significant reduction of bias in the GEOS DAS moisture analyses.

  13. Phase shifts in I = 2 ππ-scattering from two lattice approaches

    NASA Astrophysics Data System (ADS)

    Kurth, T.; Ishii, N.; Doi, T.; Aoki, S.; Hatsuda, T.

    2013-12-01

    We present a lattice QCD study of the phase shift of I = 2 ππ scattering on the basis of two different approaches: the standard finite volume approach by Lüscher and the recently introduced HAL QCD potential method. Quenched QCD simulations are performed on lattices with extents N s = 16 , 24 , 32 , 48 and N t = 128 as well as lattice spacing a ~ 0 .115 fm and a pion mass of m π ~ 940 MeV. The phase shift and the scattering length are calculated in these two methods. In the potential method, the error is dominated by the systematic uncertainty associated with the violation of rotational symmetry due to finite lattice spacing. In Lüscher's approach, such systematic uncertainty is difficult to be evaluated and thus is not included in this work. A systematic uncertainty attributed to the quenched approximation, however, is not evaluated in both methods. In case of the potential method, the phase shift can be calculated for arbitrary energies below the inelastic threshold. The energy dependence of the phase shift is also obtained from Lüscher's method using different volumes and/or nonrest-frame extension of it. The results are found to agree well with the potential method.

  14. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Lee, Chien-Hsiu, E-mail: leech@naoj.org

    Eclipsing binaries offer a unique opportunity to determine basic stellar properties. With the advent of wide-field camera and all-sky time-domain surveys, thousands of eclipsing binaries have been charted via light curve classification, yet their fundamental properties remain unexplored mainly due to the extensive efforts needed for spectroscopic follow-ups. In this paper, we present the discovery of a short-period ( P  = 0.313 day), double-lined M-dwarf eclipsing binary, CSSJ114804.3+255132/SDSSJ114804.35+255132.6, by cross-matching binary light curves from the Catalina Sky Survey and spectroscopically classified M dwarfs from the Sloan Digital Sky Survey. We obtain follow-up spectra using the Gemini telescope, enabling us to determinemore » the mass, radius, and temperature of the primary and secondary component to be M {sub 1} = 0.47 ± 0.03(statistic) ± 0.03(systematic) M {sub ⊙}, M {sub 2} = 0.46 ± 0.03(statistic) ± 0.03(systematic) M {sub ⊙}, R {sub 1} = 0.52 ± 0.08(statistic) ± 0.07(systematic) R {sub ⊙}, R {sub 2} =0.60 ± 0.08(statistic) ± 0.08(systematic) R {sub ⊙}, T {sub 1} = 3560 ± 100 K, and T {sub 2} = 3040 ± 100 K, respectively. The systematic error was estimated using the difference between eccentric and non-eccentric fits. Our analysis also indicates that there is definitively third-light contamination (66%) in the CSS photometry. The secondary star seems inflated, probably due to tidal locking of the close secondary companion, which is common for very short-period binary systems. Future spectroscopic observations with high resolution will narrow down the uncertainties of stellar parameters for both components, rendering this system as a benchmark for studying fundamental properties of M dwarfs.« less

  15. Total error shift patterns for daily CT on rails image-guided radiotherapy to the prostate bed

    PubMed Central

    2011-01-01

    Background To evaluate the daily total error shift patterns on post-prostatectomy patients undergoing image guided radiotherapy (IGRT) with a diagnostic quality computer tomography (CT) on rails system. Methods A total of 17 consecutive post-prostatectomy patients receiving adjuvant or salvage IMRT using CT-on-rails IGRT were analyzed. The prostate bed's daily total error shifts were evaluated for a total of 661 CT scans. Results In the right-left, cranial-caudal, and posterior-anterior directions, 11.5%, 9.2%, and 6.5% of the 661 scans required no position adjustments; 75.3%, 66.1%, and 56.8% required a shift of 1 - 5 mm; 11.5%, 20.9%, and 31.2% required a shift of 6 - 10 mm; and 1.7%, 3.8%, and 5.5% required a shift of more than 10 mm, respectively. There was evidence of correlation between the x and y, x and z, and y and z axes in 3, 3, and 3 of 17 patients, respectively. Univariate (ANOVA) analysis showed that the total error pattern was random in the x, y, and z axis for 10, 5, and 2 of 17 patients, respectively, and systematic for the rest. Multivariate (MANOVA) analysis showed that the (x,y), (x,z), (y,z), and (x, y, z) total error pattern was random in 5, 1, 1, and 1 of 17 patients, respectively, and systematic for the rest. Conclusions The overall daily total error shift pattern for these 17 patients simulated with an empty bladder, and treated with CT on rails IGRT was predominantly systematic. Despite this, the temporal vector trends showed complex behaviors and unpredictable changes in magnitude and direction. These findings highlight the importance of using daily IGRT in post-prostatectomy patients. PMID:22024279

  16. Analyzing false positives of four questions in the Force Concept Inventory

    NASA Astrophysics Data System (ADS)

    Yasuda, Jun-ichiro; Mae, Naohiro; Hull, Michael M.; Taniguchi, Masa-aki

    2018-06-01

    In this study, we analyze the systematic error from false positives of the Force Concept Inventory (FCI). We compare the systematic errors of question 6 (Q.6), Q.7, and Q.16, for which clearly erroneous reasoning has been found, with Q.5, for which clearly erroneous reasoning has not been found. We determine whether or not a correct response to a given FCI question is a false positive using subquestions. In addition to the 30 original questions, subquestions were introduced for Q.5, Q.6, Q.7, and Q.16. This modified version of the FCI was administered to 1145 university students in Japan from 2015 to 2017. In this paper, we discuss our finding that the systematic errors of Q.6, Q.7, and Q.16 are much larger than that of Q.5 for students with mid-level FCI scores. Furthermore, we find that, averaged over the data sample, the sum of the false positives from Q.5, Q.6, Q.7, and Q.16 is about 10% of the FCI score of a midlevel student.

  17. Precision Møller Polarimetry

    NASA Astrophysics Data System (ADS)

    Henry, William; Jefferson Lab Hall A Collaboration

    2017-09-01

    Jefferson Lab's cutting-edge parity-violating electron scattering program has increasingly stringent requirements for systematic errors. Beam polarimetry is often one of the dominant systematic errors in these experiments. A new Møller Polarimeter in Hall A of Jefferson Lab (JLab) was installed in 2015 and has taken first measurements for a polarized scattering experiment. Upcoming parity violation experiments in Hall A include CREX, PREX-II, MOLLER and SOLID with the latter two requiring <0.5% precision on beam polarization measurements. The polarimeter measures the Møller scattering rates of the polarized electron beam incident upon an iron target placed in a saturating magnetic field. The spectrometer consists of four focusing quadrapoles and one momentum selection dipole. The detector is designed to measure the scattered and knock out target electrons in coincidence. Beam polarization is extracted by constructing an asymmetry from the scattering rates when the incident electron spin is parallel and anti-parallel to the target electron spin. Initial data will be presented. Sources of systematic errors include target magnetization, spectrometer acceptance, the Levchuk effect, and radiative corrections which will be discussed. National Science Foundation.

  18. SU-G-BRB-11: On the Sensitivity of An EPID-Based 3D Dose Verification System to Detect Delivery Errors in VMAT Treatments

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gonzalez, P; Olaciregui-Ruiz, I; Mijnheer, B

    2016-06-15

    Purpose: To investigate the sensitivity of an EPID-based 3D dose verification system to detect delivery errors in VMAT treatments. Methods: For this study 41 EPID-reconstructed 3D in vivo dose distributions of 15 different VMAT plans (H&N, lung, prostate and rectum) were selected. To simulate the effect of delivery errors, their TPS plans were modified by: 1) scaling of the monitor units by ±3% and ±6% and 2) systematic shifting of leaf bank positions by ±1mm, ±2mm and ±5mm. The 3D in vivo dose distributions where then compared to the unmodified and modified treatment plans. To determine the detectability of themore » various delivery errors, we made use of a receiver operator characteristic (ROC) methodology. True positive and false positive rates were calculated as a function of the γ-parameters γmean, γ1% (near-maximum γ) and the PTV dose parameter ΔD{sub 50} (i.e. D{sub 50}(EPID)-D{sub 50}(TPS)). The ROC curve is constructed by plotting the true positive rate vs. the false positive rate. The area under the ROC curve (AUC) then serves as a measure of the performance of the EPID dosimetry system in detecting a particular error; an ideal system has AUC=1. Results: The AUC ranges for the machine output errors and systematic leaf position errors were [0.64 – 0.93] and [0.48 – 0.92] respectively using γmean, [0.57 – 0.79] and [0.46 – 0.85] using γ1% and [0.61 – 0.77] and [ 0.48 – 0.62] using ΔD{sub 50}. Conclusion: For the verification of VMAT deliveries, the parameter γmean is the best discriminator for the detection of systematic leaf position errors and monitor unit scaling errors. Compared to γmean and γ1%, the parameter ΔD{sub 50} performs worse as a discriminator in all cases.« less

  19. Strategic planning to reduce medical errors: Part I--diagnosis.

    PubMed

    Waldman, J Deane; Smith, Howard L

    2012-01-01

    Despite extensive dialogue and a continuing stream of proposed medical practice revisions, medical errors and adverse impacts persist. Connectivity of vital elements is often underestimated or not fully understood. This paper analyzes medical errors from a systems dynamics viewpoint (Part I). Our analysis suggests in Part II that the most fruitful strategies for dissolving medical errors include facilitating physician learning, educating patients about appropriate expectations surrounding treatment regimens, and creating "systematic" patient protections rather than depending on (nonexistent) perfect providers.

  20. Regional Carbon Dioxide and Water Vapor Exchange Over Heterogeneous Terrain

    NASA Technical Reports Server (NTRS)

    Mahrt, Larry J.

    2005-01-01

    In spite of setbacks due to forest fires, eviction after a change of landowners and unanticipated need to upgrade and replace much of the instrumentation, substantial progress has been made during the past three years, resulting in major new findings. Although most of the results are in manuscript form, three papers have been published and a fourth was recently submitted. The data has been subjected to extensive quality control. Extra attention has been devoted to the influence of tilt rotation and flux-calculation method, particularly with respect to nocturnal fluxes. Previous/standard methods for calculating nocturnal fluxes with moderate and strong stability are inadequate and lead to large random fluxes errors for individual records, due partly to inadvertent inclusion of mesoscale motions that strongly contaminant the estimation of fluxes by weak turbulence. Such large errors are serious for process studies requiring carbon dioxide fluxes for individual records, but are substantially reduced when averaging fluxes over longer periods as in calculation of annual NEE budgets. We have employed a superior method for estimating fluxes in stable conditions with a variable averaging width . Mesoscale fluxes are generally unimportant except for events and are generally not systematic or predictable. Mesoscale or regional models of our region are not able to reproduce important aspects of the diurnally varying wind field

  1. Detection and Correction of Step Discontinuities in Kepler Flux Time Series

    NASA Technical Reports Server (NTRS)

    Kolodziejczak, J. J.; Morris, R. L.

    2011-01-01

    PDC 8.0 includes an implementation of a new algorithm to detect and correct step discontinuities appearing in roughly one of every 20 stellar light curves during a given quarter. The majority of such discontinuities are believed to result from high-energy particles (either cosmic or solar in origin) striking the photometer and causing permanent local changes (typically -0.5%) in quantum efficiency, though a partial exponential recovery is often observed [1]. Since these features, dubbed sudden pixel sensitivity dropouts (SPSDs), are uncorrelated across targets they cannot be properly accounted for by the current detrending algorithm. PDC detrending is based on the assumption that features in flux time series are due either to intrinsic stellar phenomena or to systematic errors and that systematics will exhibit measurable correlations across targets. SPSD events violate these assumptions and their successful removal not only rectifies the flux values of affected targets, but demonstrably improves the overall performance of PDC detrending [1].

  2. Critical Analysis of Dual-Probe Heat-Pulse Technique Applied to Measuring Thermal Diffusivity

    NASA Astrophysics Data System (ADS)

    Bovesecchi, G.; Coppa, P.; Corasaniti, S.; Potenza, M.

    2018-07-01

    The paper presents an analysis of the experimental parameters involved in application of the dual-probe heat pulse technique, followed by a critical review of methods for processing thermal response data (e.g., maximum detection and nonlinear least square regression) and the consequent obtainable uncertainty. Glycerol was selected as testing liquid, and its thermal diffusivity was evaluated over the temperature range from - 20 °C to 60 °C. In addition, Monte Carlo simulation was used to assess the uncertainty propagation for maximum detection. It was concluded that maximum detection approach to process thermal response data gives the closest results to the reference data inasmuch nonlinear regression results are affected by major uncertainties due to partial correlation between the evaluated parameters. Besides, the interpolation of temperature data with a polynomial to find the maximum leads to a systematic difference between measured and reference data, as put into evidence by the Monte Carlo simulations; through its correction, this systematic error can be reduced to a negligible value, about 0.8 %.

  3. Quality Assurance of Chemical Measurements.

    ERIC Educational Resources Information Center

    Taylor, John K.

    1981-01-01

    Reviews aspects of quality control (methods to control errors) and quality assessment (verification that systems are operating within acceptable limits) including an analytical measurement system, quality control by inspection, control charts, systematic errors, and use of SRMs, materials for which properties are certified by the National Bureau…

  4. Rational-Emotive Therapy versus Systematic Desensitization: A Comment on Moleski and Tosi.

    ERIC Educational Resources Information Center

    Atkinson, Leslie

    1983-01-01

    Questioned the statistical analyses of the Moleski and Tosi investigation of rational-emotive therapy versus systematic desensitization. Suggested means for lowering the error rate through a more efficient experimental design. Recommended a reanalysis of the original data. (LLL)

  5. ASME B89.4.19 Performance Evaluation Tests and Geometric Misalignments in Laser Trackers

    PubMed Central

    Muralikrishnan, B.; Sawyer, D.; Blackburn, C.; Phillips, S.; Borchardt, B.; Estler, W. T.

    2009-01-01

    Small and unintended offsets, tilts, and eccentricity of the mechanical and optical components in laser trackers introduce systematic errors in the measured spherical coordinates (angles and range readings) and possibly in the calculated lengths of reference artifacts. It is desirable that the tests described in the ASME B89.4.19 Standard [1] be sensitive to these geometric misalignments so that any resulting systematic errors are identified during performance evaluation. In this paper, we present some analysis, using error models and numerical simulation, of the sensitivity of the length measurement system tests and two-face system tests in the B89.4.19 Standard to misalignments in laser trackers. We highlight key attributes of the testing strategy adopted in the Standard and propose new length measurement system tests that demonstrate improved sensitivity to some misalignments. Experimental results with a tracker that is not properly error corrected for the effects of the misalignments validate claims regarding the proposed new length tests. PMID:27504211

  6. Topological analysis of polymeric melts: chain-length effects and fast-converging estimators for entanglement length.

    PubMed

    Hoy, Robert S; Foteinopoulou, Katerina; Kröger, Martin

    2009-09-01

    Primitive path analyses of entanglements are performed over a wide range of chain lengths for both bead spring and atomistic polyethylene polymer melts. Estimators for the entanglement length N_{e} which operate on results for a single chain length N are shown to produce systematic O(1/N) errors. The mathematical roots of these errors are identified as (a) treating chain ends as entanglements and (b) neglecting non-Gaussian corrections to chain and primitive path dimensions. The prefactors for the O(1/N) errors may be large; in general their magnitude depends both on the polymer model and the method used to obtain primitive paths. We propose, derive, and test new estimators which eliminate these systematic errors using information obtainable from the variation in entanglement characteristics with chain length. The new estimators produce accurate results for N_{e} from marginally entangled systems. Formulas based on direct enumeration of entanglements appear to converge faster and are simpler to apply.

  7. [Comparison study on sampling methods of Oncomelania hupensis snail survey in marshland schistosomiasis epidemic areas in China].

    PubMed

    An, Zhao; Wen-Xin, Zhang; Zhong, Yao; Yu-Kuan, Ma; Qing, Liu; Hou-Lang, Duan; Yi-di, Shang

    2016-06-29

    To optimize and simplify the survey method of Oncomelania hupensis snail in marshland endemic region of schistosomiasis and increase the precision, efficiency and economy of the snail survey. A quadrate experimental field was selected as the subject of 50 m×50 m size in Chayegang marshland near Henghu farm in the Poyang Lake region and a whole-covered method was adopted to survey the snails. The simple random sampling, systematic sampling and stratified random sampling methods were applied to calculate the minimum sample size, relative sampling error and absolute sampling error. The minimum sample sizes of the simple random sampling, systematic sampling and stratified random sampling methods were 300, 300 and 225, respectively. The relative sampling errors of three methods were all less than 15%. The absolute sampling errors were 0.221 7, 0.302 4 and 0.047 8, respectively. The spatial stratified sampling with altitude as the stratum variable is an efficient approach of lower cost and higher precision for the snail survey.

  8. Analytical quality goals derived from the total deviation from patients' homeostatic set points, with a margin for analytical errors.

    PubMed

    Bolann, B J; Asberg, A

    2004-01-01

    The deviation of test results from patients' homeostatic set points in steady-state conditions may complicate interpretation of the results and the comparison of results with clinical decision limits. In this study the total deviation from the homeostatic set point is defined as the maximum absolute deviation for 95% of measurements, and we present analytical quality requirements that prevent analytical error from increasing this deviation to more than about 12% above the value caused by biology alone. These quality requirements are: 1) The stable systematic error should be approximately 0, and 2) a systematic error that will be detected by the control program with 90% probability, should not be larger than half the value of the combined analytical and intra-individual standard deviation. As a result, when the most common control rules are used, the analytical standard deviation may be up to 0.15 times the intra-individual standard deviation. Analytical improvements beyond these requirements have little impact on the interpretability of measurement results.

  9. Pion mass dependence of the HVP contribution to muon g - 2

    NASA Astrophysics Data System (ADS)

    Golterman, Maarten; Maltman, Kim; Peris, Santiago

    2018-03-01

    One of the systematic errors in some of the current lattice computations of the HVP contribution to the muon anomalous magnetic moment g - 2 is that associated with the extrapolation to the physical pion mass. We investigate this extrapolation assuming lattice pion masses in the range of 220 to 440 MeV with the help of two-loop chiral perturbation theory, and find that such an extrapolation is unlikely to lead to control of this systematic error at the 1% level. This remains true even if various proposed tricks to improve the chiral extrapolation are taken into account.

  10. Comparison of different source calculations in two-nucleon channel at large quark mass

    NASA Astrophysics Data System (ADS)

    Yamazaki, Takeshi; Ishikawa, Ken-ichi; Kuramashi, Yoshinobu

    2018-03-01

    We investigate a systematic error coming from higher excited state contributions in the energy shift of light nucleus in the two-nucleon channel by comparing two different source calculations with the exponential and wall sources. Since it is hard to obtain a clear signal of the wall source correlation function in a plateau region, we employ a large quark mass as the pion mass is 0.8 GeV in quenched QCD. We discuss the systematic error in the spin-triplet channel of the two-nucleon system, and the volume dependence of the energy shift.

  11. Pressure Measurements Using an Airborne Differential Absorption Lidar. Part 1; Analysis of the Systematic Error Sources

    NASA Technical Reports Server (NTRS)

    Flamant, Cyrille N.; Schwemmer, Geary K.; Korb, C. Laurence; Evans, Keith D.; Palm, Stephen P.

    1999-01-01

    Remote airborne measurements of the vertical and horizontal structure of the atmospheric pressure field in the lower troposphere are made with an oxygen differential absorption lidar (DIAL). A detailed analysis of this measurement technique is provided which includes corrections for imprecise knowledge of the detector background level, the oxygen absorption fine parameters, and variations in the laser output energy. In addition, we analyze other possible sources of systematic errors including spectral effects related to aerosol and molecular scattering interference by rotational Raman scattering and interference by isotopic oxygen fines.

  12. Production and detection of atomic hexadecapole at Earth's magnetic field.

    PubMed

    Acosta, V M; Auzinsh, M; Gawlik, W; Grisins, P; Higbie, J M; Jackson Kimball, D F; Krzemien, L; Ledbetter, M P; Pustelny, S; Rochester, S M; Yashchuk, V V; Budker, D

    2008-07-21

    Optical magnetometers measure magnetic fields with extremely high precision and without cryogenics. However, at geomagnetic fields, important for applications from landmine removal to archaeology, they suffer from nonlinear Zeeman splitting, leading to systematic dependence on sensor orientation. We present experimental results on a method of eliminating this systematic error, using the hexadecapole atomic polarization moment. In particular, we demonstrate selective production of the atomic hexadecapole moment at Earth's magnetic field and verify its immunity to nonlinear Zeeman splitting. This technique promises to eliminate directional errors in all-optical atomic magnetometers, potentially improving their measurement accuracy by several orders of magnitude.

  13. TYPE Ia SUPERNOVA DISTANCE MODULUS BIAS AND DISPERSION FROM K-CORRECTION ERRORS: A DIRECT MEASUREMENT USING LIGHT CURVE FITS TO OBSERVED SPECTRAL TIME SERIES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Saunders, C.; Aldering, G.; Aragon, C.

    2015-02-10

    We estimate systematic errors due to K-corrections in standard photometric analyses of high-redshift Type Ia supernovae. Errors due to K-correction occur when the spectral template model underlying the light curve fitter poorly represents the actual supernova spectral energy distribution, meaning that the distance modulus cannot be recovered accurately. In order to quantify this effect, synthetic photometry is performed on artificially redshifted spectrophotometric data from 119 low-redshift supernovae from the Nearby Supernova Factory, and the resulting light curves are fit with a conventional light curve fitter. We measure the variation in the standardized magnitude that would be fit for a givenmore » supernova if located at a range of redshifts and observed with various filter sets corresponding to current and future supernova surveys. We find significant variation in the measurements of the same supernovae placed at different redshifts regardless of filters used, which causes dispersion greater than ∼0.05 mag for measurements of photometry using the Sloan-like filters and a bias that corresponds to a 0.03 shift in w when applied to an outside data set. To test the result of a shift in supernova population or environment at higher redshifts, we repeat our calculations with the addition of a reweighting of the supernovae as a function of redshift and find that this strongly affects the results and would have repercussions for cosmology. We discuss possible methods to reduce the contribution of the K-correction bias and uncertainty.« less

  14. A quantitative comparison of simultaneous BOLD fMRI and NIRS recordings during functional brain activation

    NASA Technical Reports Server (NTRS)

    Strangman, Gary; Culver, Joseph P.; Thompson, John H.; Boas, David A.; Sutton, J. P. (Principal Investigator)

    2002-01-01

    Near-infrared spectroscopy (NIRS) has been used to noninvasively monitor adult human brain function in a wide variety of tasks. While rough spatial correspondences with maps generated from functional magnetic resonance imaging (fMRI) have been found in such experiments, the amplitude correspondences between the two recording modalities have not been fully characterized. To do so, we simultaneously acquired NIRS and blood-oxygenation level-dependent (BOLD) fMRI data and compared Delta(1/BOLD) (approximately R(2)(*)) to changes in oxyhemoglobin, deoxyhemoglobin, and total hemoglobin concentrations derived from the NIRS data from subjects performing a simple motor task. We expected the correlation with deoxyhemoglobin to be strongest, due to the causal relation between changes in deoxyhemoglobin concentrations and BOLD signal. Instead we found highly variable correlations, suggesting the need to account for individual subject differences in our NIRS calculations. We argue that the variability resulted from systematic errors associated with each of the signals, including: (1) partial volume errors due to focal concentration changes, (2) wavelength dependence of this partial volume effect, (3) tissue model errors, and (4) possible spatial incongruence between oxy- and deoxyhemoglobin concentration changes. After such effects were accounted for, strong correlations were found between fMRI changes and all optical measures, with oxyhemoglobin providing the strongest correlation. Importantly, this finding held even when including scalp, skull, and inactive brain tissue in the average BOLD signal. This may reflect, at least in part, the superior contrast-to-noise ratio for oxyhemoglobin relative to deoxyhemoglobin (from optical measurements), rather than physiology related to BOLD signal interpretation.

  15. The study design elements employed by researchers in preclinical animal experiments from two research domains and implications for automation of systematic reviews.

    PubMed

    O'Connor, Annette M; Totton, Sarah C; Cullen, Jonah N; Ramezani, Mahmood; Kalivarapu, Vijay; Yuan, Chaohui; Gilbert, Stephen B

    2018-01-01

    Systematic reviews are increasingly using data from preclinical animal experiments in evidence networks. Further, there are ever-increasing efforts to automate aspects of the systematic review process. When assessing systematic bias and unit-of-analysis errors in preclinical experiments, it is critical to understand the study design elements employed by investigators. Such information can also inform prioritization of automation efforts that allow the identification of the most common issues. The aim of this study was to identify the design elements used by investigators in preclinical research in order to inform unique aspects of assessment of bias and error in preclinical research. Using 100 preclinical experiments each related to brain trauma and toxicology, we assessed design elements described by the investigators. We evaluated Methods and Materials sections of reports for descriptions of the following design elements: 1) use of comparison group, 2) unit of allocation of the interventions to study units, 3) arrangement of factors, 4) method of factor allocation to study units, 5) concealment of the factors during allocation and outcome assessment, 6) independence of study units, and 7) nature of factors. Many investigators reported using design elements that suggested the potential for unit-of-analysis errors, i.e., descriptions of repeated measurements of the outcome (94/200) and descriptions of potential for pseudo-replication (99/200). Use of complex factor arrangements was common, with 112 experiments using some form of factorial design (complete, incomplete or split-plot-like). In the toxicology dataset, 20 of the 100 experiments appeared to use a split-plot-like design, although no investigators used this term. The common use of repeated measures and factorial designs means understanding bias and error in preclinical experimental design might require greater expertise than simple parallel designs. Similarly, use of complex factor arrangements creates novel challenges for accurate automation of data extraction and bias and error assessment in preclinical experiments.

  16. Improving emissions inventories in North America through systematic analysis of model performance during ICARTT and MILAGRO

    NASA Astrophysics Data System (ADS)

    Mena, Marcelo Andres

    During 2004 and 2006 the University of Iowa provided air quality forecast support for flight planning of the ICARTT and MILAGRO field campaigns. A method for improvement of model performance in comparison to observations is showed. The method allows identifying sources of model error from boundary conditions and emissions inventories. Simultaneous analysis of horizontal interpolation of model error and error covariance showed that error in ozone modeling is highly correlated to the error of its precursors, and that there is geographical correlation also. During ICARTT ozone modeling error was improved by updating from the National Emissions Inventory from 1999 and 2001, and furthermore by updating large point source emissions from continuous monitoring data. Further improvements were achieved by reducing area emissions of NOx y 60% for states in the Southeast United States. Ozone error was highly correlated to NOy error during this campaign. Also ozone production in the United States was most sensitive to NOx emissions. During MILAGRO model performance in terms of correlation coefficients was higher, but model error in ozone modeling was high due overestimation of NOx and VOC emissions in Mexico City during forecasting. Large model improvements were shown by decreasing NOx emissions in Mexico City by 50% and VOC by 60%. Recurring ozone error is spatially correlated to CO and NOy error. Sensitivity studies show that Mexico City aerosol can reduce regional photolysis rates by 40% and ozone formation by 5-10%. Mexico City emissions can enhance NOy and O3 concentrations over the Gulf of Mexico in up to 10-20%. Mexico City emissions can convert regional ozone production regimes from VOC to NOx limited. A method of interpolation of observations along flight tracks is shown, which can be used to infer on the direction of outflow plumes. The use of ratios such as O3/NOy and NOx/NOy can be used to provide information on chemical characteristics of the plume, such as age, and ozone production regime. Interpolated MTBE observations can be used as a tracer of urban mobile source emissions. Finally procedures for estimating and gridding emissions inventories in Brazil and Mexico are presented.

  17. Image guidance in prostate cancer - can offline corrections be an effective substitute for daily online imaging?

    PubMed

    Prasad, Devleena; Das, Pinaki; Saha, Niladri S; Chatterjee, Sanjoy; Achari, Rimpa; Mallick, Indranil

    2014-01-01

    This aim of this study was to determine if a less resource-intensive and established offline correction protocol - the No Action Level (NAL) protocol was as effective as daily online corrections of setup deviations in curative high-dose radiotherapy of prostate cancer. A total of 683 daily megavoltage CT (MVCT) or kilovoltage CT (kvCBCT) images of 30 patients with localized prostate cancer treated with intensity modulated radiotherapy were evaluated. Daily image-guidance was performed and setup errors in three translational axes recorded. The NAL protocol was simulated by using the mean shift calculated from the first five fractions and implemented on all subsequent treatments. Using the imaging data from the remaining fractions, the daily residual error (RE) was determined. The proportion of fractions where the RE was greater than 3,5 and 7 mm was calculated, and also the actual PTV margin that would be required if the offline protocol was followed. Using the NAL protocol reduced the systematic but not the random errors. Corrections made using the NAL protocol resulted in small and acceptable RE in the mediolateral (ML) and superoinferior (SI) directions with 46/533 (8.1%) and 48/533 (5%) residual shifts above 5 mm. However; residual errors greater than 5mm in the anteroposterior (AP) direction remained in 181/533 (34%) of fractions. The PTV margins calculated based on residual errors were 5mm, 5mm and 13 mm in the ML, SI and AP directions respectively. Offline correction using the NAL protocol resulted in unacceptably high residual errors in the AP direction, due to random uncertainties of rectal and bladder filling. Daily online imaging and corrections remain the standard image guidance policy for highly conformal radiotherapy of prostate cancer.

  18. Characterizing the physical-basis of orographic rainfall retrieval errors due to terrain artifacts on GPM-DPR reflectivity profiles

    NASA Astrophysics Data System (ADS)

    Arulraj, M.; Barros, A. P.

    2017-12-01

    GPM-DPR reflectivity profiles in mountainous regions are severely handicapped by low level ground-clutter artifacts which have different error characteristics depending on landform (upwind slopes of high mountains versus complex topography in middle-mountains) and precipitation regime. These artifacts result in high detection and estimation errors especially in mid-latitude and tropical mountain regions where low-level light precipitation and complex multi-layer clouds interact with incoming storms. Here, we present results assessment studies in the Southern Appalachian Mountains (SAM) and preliminary results over the eastern slopes of the Andes using ground-based observations from the long-term hydrometeorological networks and model studies toward developing a physically-based framework to systematically identify and attribute measurement errors. Specifically, the focus is on events when GPM-DPR Ka- and Ku- Band precipitation radar misses low-level precipitation with vertical altitude less than 2 km AGL (above ground level). For this purpose, ground-based MRR and Parsivel disdrometer observations near the surface are compared with the reflectivity profiles observed by the GPM-DPR overpasses, the raindrop-size spectra are used to classify the precipitation regime associated with different classes of detection and estimation errors. This information will be used along with a coupled rainfall dynamics and radar simulator model to 1) merge the low-level GPM-DPR measured reflectivity with the MRR reflectivities optimally under strict physically-based constraints and 2) build a library of reflectivity profile corrections. Finally, preliminary 4D analysis of the organization of reflectivity correction modes, microphysical regimes, topography and storm environment will be presented toward developing a general physically-based error model.

  19. Improving Planck calibration by including frequency-dependent relativistic corrections

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Quartin, Miguel; Notari, Alessio, E-mail: mquartin@if.ufrj.br, E-mail: notari@ffn.ub.es

    2015-09-01

    The Planck satellite detectors are calibrated in the 2015 release using the 'orbital dipole', which is the time-dependent dipole generated by the Doppler effect due to the motion of the satellite around the Sun. Such an effect has also relativistic time-dependent corrections of relative magnitude 10{sup −3}, due to coupling with the 'solar dipole' (the motion of the Sun compared to the CMB rest frame), which are included in the data calibration by the Planck collaboration. We point out that such corrections are subject to a frequency-dependent multiplicative factor. This factor differs from unity especially at the highest frequencies, relevantmore » for the HFI instrument. Since currently Planck calibration errors are dominated by systematics, to the point that polarization data is currently unreliable at large scales, such a correction can in principle be highly relevant for future data releases.« less

  20. Predicting areas of sustainable error growth in quasigeostrophic flows using perturbation alignment properties

    NASA Astrophysics Data System (ADS)

    Rivière, G.; Hua, B. L.

    2004-10-01

    A new perturbation initialization method is used to quantify error growth due to inaccuracies of the forecast model initial conditions in a quasigeostrophic box ocean model describing a wind-driven double gyre circulation. This method is based on recent analytical results on Lagrangian alignment dynamics of the perturbation velocity vector in quasigeostrophic flows. More specifically, it consists in initializing a unique perturbation from the sole knowledge of the control flow properties at the initial time of the forecast and whose velocity vector orientation satisfies a Lagrangian equilibrium criterion. This Alignment-based Initialization method is hereafter denoted as the AI method.In terms of spatial distribution of the errors, we have compared favorably the AI error forecast with the mean error obtained with a Monte-Carlo ensemble prediction. It is shown that the AI forecast is on average as efficient as the error forecast initialized with the leading singular vector for the palenstrophy norm, and significantly more efficient than that for total energy and enstrophy norms. Furthermore, a more precise examination shows that the AI forecast is systematically relevant for all control flows whereas the palenstrophy singular vector forecast leads sometimes to very good scores and sometimes to very bad ones.A principal component analysis at the final time of the forecast shows that the AI mode spatial structure is comparable to that of the first eigenvector of the error covariance matrix for a "bred mode" ensemble. Furthermore, the kinetic energy of the AI mode grows at the same constant rate as that of the "bred modes" from the initial time to the final time of the forecast and is therefore characterized by a sustained phase of error growth. In this sense, the AI mode based on Lagrangian dynamics of the perturbation velocity orientation provides a rationale of the "bred mode" behavior.

  1. Bayesian inversions of a dynamic vegetation model at four European grassland sites

    NASA Astrophysics Data System (ADS)

    Minet, J.; Laloy, E.; Tychon, B.; Francois, L.

    2015-05-01

    Eddy covariance data from four European grassland sites are used to probabilistically invert the CARAIB (CARbon Assimilation In the Biosphere) dynamic vegetation model (DVM) with 10 unknown parameters, using the DREAM(ZS) (DiffeRential Evolution Adaptive Metropolis) Markov chain Monte Carlo (MCMC) sampler. We focus on comparing model inversions, considering both homoscedastic and heteroscedastic eddy covariance residual errors, with variances either fixed a priori or jointly inferred together with the model parameters. Agreements between measured and simulated data during calibration are comparable with previous studies, with root mean square errors (RMSEs) of simulated daily gross primary productivity (GPP), ecosystem respiration (RECO) and evapotranspiration (ET) ranging from 1.73 to 2.19, 1.04 to 1.56 g C m-2 day-1 and 0.50 to 1.28 mm day-1, respectively. For the calibration period, using a homoscedastic eddy covariance residual error model resulted in a better agreement between measured and modelled data than using a heteroscedastic residual error model. However, a model validation experiment showed that CARAIB models calibrated considering heteroscedastic residual errors perform better. Posterior parameter distributions derived from using a heteroscedastic model of the residuals thus appear to be more robust. This is the case even though the classical linear heteroscedastic error model assumed herein did not fully remove heteroscedasticity of the GPP residuals. Despite the fact that the calibrated model is generally capable of fitting the data within measurement errors, systematic bias in the model simulations are observed. These are likely due to model inadequacies such as shortcomings in the photosynthesis modelling. Besides the residual error treatment, differences between model parameter posterior distributions among the four grassland sites are also investigated. It is shown that the marginal distributions of the specific leaf area and characteristic mortality time parameters can be explained by site-specific ecophysiological characteristics.

  2. Quotation accuracy in medical journal articles—a systematic review and meta-analysis

    PubMed Central

    Jergas, Hannah

    2015-01-01

    Background. Quotations and references are an indispensable element of scientific communication. They should support what authors claim or provide important background information for readers. Studies indicate, however, that quotations not serving their purpose—quotation errors—may be prevalent. Methods. We carried out a systematic review, meta-analysis and meta-regression of quotation errors, taking account of differences between studies in error ascertainment. Results. Out of 559 studies screened we included 28 in the main analysis, and estimated major, minor and total quotation error rates of 11,9%, 95% CI [8.4, 16.6] 11.5% [8.3, 15.7], and 25.4% [19.5, 32.4]. While heterogeneity was substantial, even the lowest estimate of total quotation errors was considerable (6.7%). Indirect references accounted for less than one sixth of all quotation problems. The findings remained robust in a number of sensitivity and subgroup analyses (including risk of bias analysis) and in meta-regression. There was no indication of publication bias. Conclusions. Readers of medical journal articles should be aware of the fact that quotation errors are common. Measures against quotation errors include spot checks by editors and reviewers, correct placement of citations in the text, and declarations by authors that they have checked cited material. Future research should elucidate if and to what degree quotation errors are detrimental to scientific progress. PMID:26528420

  3. Applying lessons learned to enhance human performance and reduce human error for ISS operations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nelson, W.R.

    1999-01-01

    A major component of reliability, safety, and mission success for space missions is ensuring that the humans involved (flight crew, ground crew, mission control, etc.) perform their tasks and functions as required. This includes compliance with training and procedures during normal conditions, and successful compensation when malfunctions or unexpected conditions occur. A very significant issue that affects human performance in space flight is human error. Human errors can invalidate carefully designed equipment and procedures. If certain errors combine with equipment failures or design flaws, mission failure or loss of life can occur. The control of human error during operation ofmore » the International Space Station (ISS) will be critical to the overall success of the program. As experience from Mir operations has shown, human performance plays a vital role in the success or failure of long duration space missions. The Department of Energy{close_quote}s Idaho National Engineering and Environmental Laboratory (INEEL) is developing a systematic approach to enhance human performance and reduce human errors for ISS operations. This approach is based on the systematic identification and evaluation of lessons learned from past space missions such as Mir to enhance the design and operation of ISS. This paper will describe previous INEEL research on human error sponsored by NASA and how it can be applied to enhance human reliability for ISS. {copyright} {ital 1999 American Institute of Physics.}« less

  4. Applying lessons learned to enhance human performance and reduce human error for ISS operations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nelson, W.R.

    1998-09-01

    A major component of reliability, safety, and mission success for space missions is ensuring that the humans involved (flight crew, ground crew, mission control, etc.) perform their tasks and functions as required. This includes compliance with training and procedures during normal conditions, and successful compensation when malfunctions or unexpected conditions occur. A very significant issue that affects human performance in space flight is human error. Human errors can invalidate carefully designed equipment and procedures. If certain errors combine with equipment failures or design flaws, mission failure or loss of life can occur. The control of human error during operation ofmore » the International Space Station (ISS) will be critical to the overall success of the program. As experience from Mir operations has shown, human performance plays a vital role in the success or failure of long duration space missions. The Department of Energy`s Idaho National Engineering and Environmental Laboratory (INEEL) is developed a systematic approach to enhance human performance and reduce human errors for ISS operations. This approach is based on the systematic identification and evaluation of lessons learned from past space missions such as Mir to enhance the design and operation of ISS. This paper describes previous INEEL research on human error sponsored by NASA and how it can be applied to enhance human reliability for ISS.« less

  5. Measuring diagnoses: ICD code accuracy.

    PubMed

    O'Malley, Kimberly J; Cook, Karon F; Price, Matt D; Wildes, Kimberly Raiford; Hurdle, John F; Ashton, Carol M

    2005-10-01

    To examine potential sources of errors at each step of the described inpatient International Classification of Diseases (ICD) coding process. The use of disease codes from the ICD has expanded from classifying morbidity and mortality information for statistical purposes to diverse sets of applications in research, health care policy, and health care finance. By describing a brief history of ICD coding, detailing the process for assigning codes, identifying where errors can be introduced into the process, and reviewing methods for examining code accuracy, we help code users more systematically evaluate code accuracy for their particular applications. We summarize the inpatient ICD diagnostic coding process from patient admission to diagnostic code assignment. We examine potential sources of errors at each step and offer code users a tool for systematically evaluating code accuracy. Main error sources along the "patient trajectory" include amount and quality of information at admission, communication among patients and providers, the clinician's knowledge and experience with the illness, and the clinician's attention to detail. Main error sources along the "paper trail" include variance in the electronic and written records, coder training and experience, facility quality-control efforts, and unintentional and intentional coder errors, such as misspecification, unbundling, and upcoding. By clearly specifying the code assignment process and heightening their awareness of potential error sources, code users can better evaluate the applicability and limitations of codes for their particular situations. ICD codes can then be used in the most appropriate ways.

  6. The Relationships Among Perceived Patients' Safety Culture, Intention to Report Errors, and Leader Coaching Behavior of Nurses in Korea: A Pilot Study.

    PubMed

    Ko, YuKyung; Yu, Soyoung

    2017-09-01

    This study was undertaken to explore the correlations among nurses' perceptions of patient safety culture, their intention to report errors, and leader coaching behaviors. The participants (N = 289) were nurses from 5 Korean hospitals with approximately 300 to 500 beds each. Sociodemographic variables, patient safety culture, intention to report errors, and coaching behavior were measured using self-report instruments. Data were analyzed using descriptive statistics, Pearson correlation coefficient, the t test, and the Mann-Whitney U test. Nurses' perceptions of patient safety culture and their intention to report errors showed significant differences between groups of nurses who rated their leaders as high-performing or low-performing coaches. Perceived coaching behavior showed a significant, positive correlation with patient safety culture and intention to report errors, i.e., as nurses' perceptions of coaching behaviors increased, so did their ratings of patient safety culture and error reporting. There is a need in health care settings for coaching by nurse managers to provide quality nursing care and thus improve patient safety. Programs that are systematically developed and implemented to enhance the coaching behaviors of nurse managers are crucial to the improvement of patient safety and nursing care. Moreover, a systematic analysis of the causes of malpractice, as opposed to a focus on the punitive consequences of errors, could increase error reporting and therefore promote a culture in which a higher level of patient safety can thrive.

  7. Estimation of geopotential differences over intercontinental locations using satellite and terrestrial measurements. Ph.D. Thesis

    NASA Technical Reports Server (NTRS)

    Pavlis, Nikolaos K.

    1991-01-01

    An error analysis study was conducted in order to assess the current accuracies and the future anticipated improvements in the estimation of geopotential differences over intercontinental locations. An observation/estimation scheme was proposed and studied, whereby gravity disturbance measurements on the Earth's surface, in caps surrounding the estimation points, are combined with corresponding data in caps directly over these points at the altitude of a low orbiting satellite, for the estimation of the geopotential difference between the terrestrial stations. The mathematical modeling required to relate the primary observables to the parameters to be estimated, was studied for the terrestrial data and the data at altitude. Emphasis was placed on the examination of systematic effects and on the corresponding reductions that need to be applied to the measurements to avoid systematic errors. The error estimation for the geopotential differences was performed using both truncation theory and least squares collocation with ring averages, in case observations on the Earth's surface only are used. The error analysis indicated that with the currently available global geopotential model OSU89B and with gravity disturbance data in 2 deg caps surrounding the estimation points, the error of the geopotential difference arising from errors in the reference model and the cap data is about 23 kgal cm, for 30 deg station separation.

  8. Running coupling constant from lattice studies of gluon and ghost propagators

    NASA Astrophysics Data System (ADS)

    Cucchieri, A.; Mendes, T.

    2004-12-01

    We present a numerical study of the running coupling constant in four-dimensional pure-SU(2) lattice gauge theory. The running coupling is evaluated by fitting data for the gluon and ghost propagators in minimal Landau gauge. Following Refs. [1, 2], the fitting formulae are obtained by a simultaneous integration of the β function and of a function coinciding with the anomalous dimension of the propagator in the momentum subtraction scheme. We consider these formulae at three and four loops. The fitting method works well, especially for the ghost case, for which statistical error and hyper-cubic effects are very small. Our present result for ΛMS is 200-40+60 MeV, where the error is purely systematic. We are currently extending this analysis to five loops in order to reduce this systematic error.

  9. Single-lens 3D digital image correlation system based on a bilateral telecentric lens and a bi-prism: Systematic error analysis and correction

    NASA Astrophysics Data System (ADS)

    Wu, Lifu; Zhu, Jianguo; Xie, Huimin; Zhou, Mengmeng

    2016-12-01

    Recently, we proposed a single-lens 3D digital image correlation (3D DIC) method and established a measurement system on the basis of a bilateral telecentric lens (BTL) and a bi-prism. This system can retrieve the 3D morphology of a target and measure its deformation using a single BTL with relatively high accuracy. Nevertheless, the system still suffers from systematic errors caused by manufacturing deficiency of the bi-prism and distortion of the BTL. In this study, in-depth evaluations of these errors and their effects on the measurement results are performed experimentally. The bi-prism deficiency and the BTL distortion are characterized by two in-plane rotation angles and several distortion coefficients, respectively. These values are obtained from a calibration process using a chessboard placed into the field of view of the system; this process is conducted after the measurement of tested specimen. A modified mathematical model is proposed, which takes these systematic errors into account and corrects them during 3D reconstruction. Experiments on retrieving the 3D positions of the chessboard grid corners and the morphology of a ceramic plate specimen are performed. The results of the experiments reveal that ignoring the bi-prism deficiency will induce attitude error to the retrieved morphology, and the BTL distortion can lead to its pseudo out-of-plane deformation. Correcting these problems can further improve the measurement accuracy of the bi-prism-based single-lens 3D DIC system.

  10. The power of vertical geolocation of atmospheric profiles from GNSS radio occultation.

    PubMed

    Scherllin-Pirscher, Barbara; Steiner, Andrea K; Kirchengast, Gottfried; Schwärz, Marc; Leroy, Stephen S

    2017-02-16

    High-resolution measurements from Global Navigation Satellite System (GNSS) radio occultation (RO) provide atmospheric profiles with independent information on altitude and pressure. This unique property is of crucial advantage when analyzing atmospheric characteristics that require joint knowledge of altitude and pressure or other thermodynamic atmospheric variables. Here we introduce and demonstrate the utility of this independent information from RO and discuss the computation, uncertainty, and use of RO atmospheric profiles on isohypsic coordinates-mean sea level altitude and geopotential height-as well as on thermodynamic coordinates (pressure and potential temperature). Using geopotential height as vertical grid, we give information on errors of RO-derived temperature, pressure, and potential temperature profiles and provide an empirical error model which accounts for seasonal and latitudinal variations. The observational uncertainty of individual temperature/pressure/potential temperature profiles is about 0.7 K/0.15%/1.4 K in the tropopause region. It gradually increases into the stratosphere and decreases toward the lower troposphere. This decrease is due to the increasing influence of background information. The total climatological error of mean atmospheric fields is, in general, dominated by the systematic error component. We use sampling error-corrected climatological fields to demonstrate the power of having different and accurate vertical coordinates available. As examples we analyze characteristics of the location of the tropopause for geopotential height, pressure, and potential temperature coordinates as well as seasonal variations of the midlatitude jet stream core. This highlights the broad applicability of RO and the utility of its versatile vertical geolocation for investigating the vertical structure of the troposphere and stratosphere.

  11. Registratiom of TM data to digital elevation models

    NASA Technical Reports Server (NTRS)

    1984-01-01

    Several problems arise when attempting to register LANDSAT thematic mapper data to U.S. B Geological Survey digital elevation models (DEMs). The TM data are currently available only in a rotated variant of the Space Oblique Mercator (SOM) map projection. Geometric transforms are thus; required to access TM data in the geodetic coordinates used by the DEMs. Due to positional errors in the TM data, these transforms require some sort of external control. The spatial resolution of TM data exceeds that of the most commonly DEM data. Oversampling DEM data to TM resolution introduces systematic noise. Common terrain processing algorithms (e.g., close computation) compound this problem by acting as high-pass filters.

  12. Global lower mesospheric water vapor revealed by LIMS observations

    NASA Technical Reports Server (NTRS)

    Gordley, L. L.; Russell, J. M., III; Remsberg, E. E.

    1985-01-01

    The Limb Infrared Monitor of the Stratospheric water vapor channel data analysis has been extended from the 1. mb level (about 48 km) to the .3 mb level (about 60 km) through a radiance averaging procedure and better understanding of systematic errors. The data show H2O mixing ratio peaks near the .5 mb level varying from 4 to 7 ppmv with latitude and season. Above this level the mixing ratio drops off quickly with altitude, but, due to experimental uncertainties, at an uncertain rate. The stratospheric results are virtually the same as determined from the archived LIMS results with a tropical hygropause and enhanced H2O concentration in the lower levels at high winter latitudes.

  13. Emittance measurements in low energy ion storage rings

    NASA Astrophysics Data System (ADS)

    Hunt, J. R.; Carli, C.; Resta-López, J.; Welsch, C. P.

    2018-07-01

    The development of the next generation of ultra-low energy antiproton and ion facilities requires precise information about the beam emittance to guarantee optimum performance. In the Extra-Low ENergy Antiproton storage ring (ELENA) the transverse emittances will be measured by scraping. However, this diagnostic measurement faces several challenges: non-zero dispersion, non-Gaussian beam distributions due to effects of the electron cooler and various systematic errors such as closed orbit offsets and inaccurate rms momentum spread estimation. In addition, diffusion processes, such as intra-beam scattering might lead to emittance overestimates. Here, we present algorithms to efficiently address the emittance reconstruction in presence of the above effects, and present simulation results for the case of ELENA.

  14. Review of literature surface tension data for molten silicon

    NASA Technical Reports Server (NTRS)

    Hardy, S.

    1981-01-01

    Measurements of the surface tension of molten silicon are reported. For marangoni flow, the important parameter is the variation of surface tension with temperature, not the absolute value of the surface tension. It is not possible to calculate temperature coefficients using surface tension measurements from different experiments because the systematic errors are usually larger than the changes in surface tension because of temperature variations. The lack of good surface tension data for liquid silicon is probably due to its extreme chemical reactivity. A material which resists attack by molten silicon is not found. It is suggested that all of the sessile drip surface tension measurements are probably for silicon which is contaminated by the substrate materials.

  15. Systematic review of the evidence for Trails B cut-off scores in assessing fitness-to-drive

    PubMed Central

    Roy, Mononita; Molnar, Frank

    2013-01-01

    Background Fitness-to-drive guidelines recommend employing the Trail Making B Test (a.k.a. Trails B), but do not provide guidance regarding cut-off scores. There is ongoing debate regarding the optimal cut-off score on the Trails B test. The objective of this study was to address this controversy by systematically reviewing the evidence for specific Trails B cut-off scores (e.g., cut-offs in both time to completion and number of errors) with respect to fitness-to-drive. Methods Systematic review of all prospective cohort, retrospective cohort, case-control, correlation, and cross-sectional studies reporting the ability of the Trails B to predict driving safety that were published in English-language, peer-reviewed journals. Results Forty-seven articles were reviewed. None of the articles justified sample sizes via formal calculations. Cut-off scores reported based on research include: 90 seconds, 133 seconds, 147 seconds, 180 seconds, and < 3 errors. Conclusions There is support for the previously published Trails B cut-offs of 3 minutes or 3 errors (the ‘3 or 3 rule’). Major methodological limitations of this body of research were uncovered including (1) lack of justification of sample size leaving studies open to Type II error (i.e., false negative findings), and (2) excessive focus on associations rather than clinically useful cut-off scores. PMID:23983828

  16. Correction of energy-dependent systematic errors in dual-energy X-ray CT using a basis material coefficients transformation method

    NASA Astrophysics Data System (ADS)

    Goh, K. L.; Liew, S. C.; Hasegawa, B. H.

    1997-12-01

    Computer simulation results from our previous studies showed that energy dependent systematic errors exist in the values of attenuation coefficient synthesized using the basis material decomposition technique with acrylic and aluminum as the basis materials, especially when a high atomic number element (e.g., iodine from radiographic contrast media) was present in the body. The errors were reduced when a basis set was chosen from materials mimicking those found in the phantom. In the present study, we employed a basis material coefficients transformation method to correct for the energy-dependent systematic errors. In this method, the basis material coefficients were first reconstructed using the conventional basis materials (acrylic and aluminum) as the calibration basis set. The coefficients were then numerically transformed to those for a more desirable set materials. The transformation was done at the energies of the low and high energy windows of the X-ray spectrum. With this correction method using acrylic and an iodine-water mixture as our desired basis set, computer simulation results showed that accuracy of better than 2% could be achieved even when iodine was present in the body at a concentration as high as 10% by mass. Simulation work had also been carried out on a more inhomogeneous 2D thorax phantom of the 3D MCAT phantom. The results of the accuracy of quantitation were presented here.

  17. Parametric decadal climate forecast recalibration (DeFoReSt 1.0)

    NASA Astrophysics Data System (ADS)

    Pasternack, Alexander; Bhend, Jonas; Liniger, Mark A.; Rust, Henning W.; Müller, Wolfgang A.; Ulbrich, Uwe

    2018-01-01

    Near-term climate predictions such as decadal climate forecasts are increasingly being used to guide adaptation measures. For near-term probabilistic predictions to be useful, systematic errors of the forecasting systems have to be corrected. While methods for the calibration of probabilistic forecasts are readily available, these have to be adapted to the specifics of decadal climate forecasts including the long time horizon of decadal climate forecasts, lead-time-dependent systematic errors (drift) and the errors in the representation of long-term changes and variability. These features are compounded by small ensemble sizes to describe forecast uncertainty and a relatively short period for which typically pairs of reforecasts and observations are available to estimate calibration parameters. We introduce the Decadal Climate Forecast Recalibration Strategy (DeFoReSt), a parametric approach to recalibrate decadal ensemble forecasts that takes the above specifics into account. DeFoReSt optimizes forecast quality as measured by the continuous ranked probability score (CRPS). Using a toy model to generate synthetic forecast observation pairs, we demonstrate the positive effect on forecast quality in situations with pronounced and limited predictability. Finally, we apply DeFoReSt to decadal surface temperature forecasts from the MiKlip prototype system and find consistent, and sometimes considerable, improvements in forecast quality compared with a simple calibration of the lead-time-dependent systematic errors.

  18. Reliability and Measurement Error of Tensiomyography to Assess Mechanical Muscle Function: A Systematic Review.

    PubMed

    Martín-Rodríguez, Saúl; Loturco, Irineu; Hunter, Angus M; Rodríguez-Ruiz, David; Munguia-Izquierdo, Diego

    2017-12-01

    Martín-Rodríguez, S, Loturco, I, Hunter, AM, Rodríguez-Ruiz, D, and Munguia-Izquierdo, D. Reliability and measurement error of tensiomyography to assess mechanical muscle function: A systematic review. J Strength Cond Res 31(12): 3524-3536, 2017-Interest in studying mechanical skeletal muscle function through tensiomyography (TMG) has increased in recent years. This systematic review aimed to (a) report the reliability and measurement error of all TMG parameters (i.e., maximum radial displacement of the muscle belly [Dm], contraction time [Tc], delay time [Td], half-relaxation time [½ Tr], and sustained contraction time [Ts]) and (b) to provide critical reflection on how to perform accurate and appropriate measurements for informing clinicians, exercise professionals, and researchers. A comprehensive literature search was performed of the Pubmed, Scopus, Science Direct, and Cochrane databases up to July 2017. Eight studies were included in this systematic review. Meta-analysis could not be performed because of the low quality of the evidence of some studies evaluated. Overall, the review of the 9 studies involving 158 participants revealed high relative reliability (intraclass correlation coefficient [ICC]) for Dm (0.91-0.99); moderate-to-high ICC for Ts (0.80-0.96), Tc (0.70-0.98), and ½ Tr (0.77-0.93); and low-to-high ICC for Td (0.60-0.98), independently of the evaluated muscles. In addition, absolute reliability (coefficient of variation [CV]) was low for all TMG parameters except for ½ Tr (CV = >20%), whereas measurement error indexes were high for this parameter. In conclusion, this study indicates that 3 of the TMG parameters (Dm, Td, and Tc) are highly reliable, whereas ½ Tr demonstrate insufficient reliability, and thus should not be used in future studies.

  19. A proposed method to investigate reliability throughout a questionnaire

    PubMed Central

    2011-01-01

    Background Questionnaires are used extensively in medical and health care research and depend on validity and reliability. However, participants may differ in interest and awareness throughout long questionnaires, which can affect reliability of their answers. A method is proposed for "screening" of systematic change in random error, which could assess changed reliability of answers. Methods A simulation study was conducted to explore whether systematic change in reliability, expressed as changed random error, could be assessed using unsupervised classification of subjects by cluster analysis (CA) and estimation of intraclass correlation coefficient (ICC). The method was also applied on a clinical dataset from 753 cardiac patients using the Jalowiec Coping Scale. Results The simulation study showed a relationship between the systematic change in random error throughout a questionnaire and the slope between the estimated ICC for subjects classified by CA and successive items in a questionnaire. This slope was proposed as an awareness measure - to assessing if respondents provide only a random answer or one based on a substantial cognitive effort. Scales from different factor structures of Jalowiec Coping Scale had different effect on this awareness measure. Conclusions Even though assumptions in the simulation study might be limited compared to real datasets, the approach is promising for assessing systematic change in reliability throughout long questionnaires. Results from a clinical dataset indicated that the awareness measure differed between scales. PMID:21974842

  20. Assessing systematic errors in GOSAT CO2 retrievals by comparing assimilated fields to independent CO2 data

    NASA Astrophysics Data System (ADS)

    Baker, D. F.; Oda, T.; O'Dell, C.; Wunch, D.; Jacobson, A. R.; Yoshida, Y.; Partners, T.

    2012-12-01

    Measurements of column CO2 concentration from space are now being taken at a spatial and temporal density that permits regional CO2 sources and sinks to be estimated. Systematic errors in the satellite retrievals must be minimized for these estimates to be useful, however. CO2 retrievals from the TANSO instrument aboard the GOSAT satellite are compared to similar column retrievals from the Total Carbon Column Observing Network (TCCON) as the primary method of validation; while this is a powerful approach, it can only be done for overflights of 10-20 locations and has not, for example, permitted validation of GOSAT data over the oceans or deserts. Here we present a complementary approach that uses a global atmospheric transport model and flux inversion method to compare different types of CO2 measurements (GOSAT, TCCON, surface in situ, and aircraft) at different locations, at the cost of added transport error. The measurements from any single type of data are used in a variational carbon data assimilation method to optimize surface CO2 fluxes (with a CarbonTracker prior), then the corresponding optimized CO2 concentration fields are compared to those data types not inverted, using the appropriate vertical weighting. With this approach, we find that GOSAT column CO2 retrievals from the ACOS project (version 2.9 and 2.10) contain systematic errors that make the modeled fit to the independent data worse. However, we find that the differences between the GOSAT data and our prior model are correlated with certain physical variables (aerosol amount, surface albedo, correction to total column mass) that are likely driving errors in the retrievals, independent of CO2 concentration. If we correct the GOSAT data using a fit to these variables, then we find the GOSAT data to improve the fit to independent CO2 data, which suggests that the useful information in the measurements outweighs the negative impact of the remaining systematic errors. With this assurance, we compare the flux estimates given by assimilating the ACOS GOSAT retrievals to similar ones given by NIES GOSAT column retrievals, bias-corrected in a similar manner. Finally, we have found systematic differences on the order of a half ppm between column CO2 integrals from 18 TCCON sites and those given by assimilating NOAA in situ data (both surface and aircraft profile) in this approach. We assess how these differences change in switching to a newer version of the TCCON retrieval software.

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