Sample records for tagelus plebeius bivalvia

  1. Growth, mortality, and reproduction of Tagelus plebeius (Bivalvia: Solecurtidae) in Southeast Brazil

    NASA Astrophysics Data System (ADS)

    da Silva, Camila Fernanda; Corte, Guilherme Nascimento; Yokoyama, Leonardo Querobim; Abrahão, Jolnnye Rodrigues; Amaral, Antônia Cecília Zacagnini

    2015-03-01

    Tagelus plebeius (Lightfoot, 1786) is a stout razor clam that is economically exploited in several countries, including several local fisheries along the Brazilian coast. Despite its wide distribution and economic importance, there are few studies that have examined the population biology of this species. This study aimed to improve the current knowledge about the biology of T. plebeius by investigating its growth and mortality on a subtropical sandy beach in Southeast Brazil over a 1-year period. In addition, the reproduction of T. plebeius was analyzed through qualitative and quantitative histological analyses during the last 7 months of the study. The parameters of the von Bertalanffy growth function were estimated to be L ∞ = 74.14 mm, K = 0.52 year-1, C = 0.47, and WP = 0.94. The instantaneous mortality rate ( Z) was 2.16 year-1, and the life span was 2.58 years. We confirmed variations ( H = 651.35; P < 0.05) in the shell length over the months of the study, and the recruitment was higher—but still low—in summer. Four cohorts were observed in the distribution of shell length frequencies. The sex ratio of the population was 1:1 during the study period, and a synchronism in gonadal development and spawning was found between males and females. The high mortality ( Z) and low recruitment rates can be interpreted as reflecting that the population of T. plebeius is under a low restoration process and could be an indication that this species has an endangered status in the study area.

  2. Infection by gymnophallid metacercariae enhances predation mortality of SW Atlantic stout razor clam Tagelus plebeius

    NASA Astrophysics Data System (ADS)

    Addino, Mariana; Lomovasky, Betina J.; Cremonte, Florencia; Iribarne, Oscar

    2010-02-01

    Parasite life cycles are frequently completed in different hosts, thus the parasites have its life cycle overlapped to natural trophic webs. The family Gymnophallidae (Class: Trematoda; Subclass: Digenea) includes digenetic parasites whose larval stages occur on bivalves and may affect bivalve predation by the final host of these parasites. In this work we evaluated: (a) if individuals of the razor clam Tagelus plebeius with higher parasite intensity suffer higher predation by the oystercatcher Haematopus palliatus and, (b) if there is any effect of parasite intensity on burrowing and escape behaviours of these razor clams which may enhance exposure to predators. Field experiments (oystercatcher exclusion vs. open access) showed that clams with higher parasite intensity support higher predation by oystercatchers, which suggests a higher consumption of more parasitized clams and thus, a more successful reproduction of parasites linked to the intensity of infection. However, clam burrowing and escape behaviours did not show differences related to different parasite intensity, suggesting that the commonly believed mechanisms are not responsible in this case.

  3. Effects of the Razor Clam Tagelus plebeius on the Fate of Petroleum Hydrocarbons: A Mesocosm Experiment.

    PubMed

    Klerks, P L; Kascak, A; Cazan, A M; Deb Adhikary, N; Chistoserdov, A; Shaik, A; Osman, S; Louka, F R

    2018-02-22

    The relationship between organisms and contaminants may be a two-way interaction: contaminants affecting the biota and the biota affecting the environmental fate and distribution of the contaminants. This may be especially so for sediment-dwelling organisms, because their burrowing and feeding can drastically influence sediment characteristics. The present study looked at the influence of the suspension-feeding stout razor clam Tagelus plebeius on the distribution of crude oil and pyrene in greenhouse mesocosm experiments. Water column turbidity and sediment redox also were monitored during the 15- to 30-day exposures to provide information on the influence of hydrocarbons and the razor clams on environmental conditions. For the experiment with crude oil, sediment was taken from the mesocosms at the end of the experiment, and the hydrocarbon-degradation potential was assessed in incubations with 14 C-naphthalene. The experiments used four treatments: hydrocarbons present/absent and razor clams present/absent. Hydrocarbon dosing levels were relatively low (1 mL of oil or 30 mg of pyrene per mesocosm with 22 L of natural sediment and 11 L of seawater). The presence of the razor clams resulted in hydrocarbon concentrations at the sediment surface being 25% lower than in mesocosms without clams. No consistent effects were noted for polycyclic aromatic hydrocarbon (PAH) concentrations in the water column or in subsurface sediment. The naphthalene-degradation potential was elevated for sediment from mesocosms dosed with oil, but the presence of the clams did not affect this potential. The presence of the razor clams resulted in a lowering of water column turbidity, but no effect on sediment redox. The hydrocarbon addition had no effect on turbidity, but sediment redox was lowered. While results show that the presence of the razor clams resulted in a loss of hydrocarbons from the surface sediment, the other results do not provide a clear picture of the underlying

  4. [Seasonal variation in proximate composition of mussels Tagelus peruvianus (Bivalvia: Solecurtidae) from the Gulf of Nicoya, Puntarenas, Costa Rica].

    PubMed

    Fonseca Rodríguez, Cristian; Marín-Vindas, Carolina; Chavarría-Solera, Fabián; Agüero Pedro, Toledo

    2011-12-01

    Marine bivalves are a very important food source for human consumption, and species that has not been of traditional use as a fishery resource are gaining interest. Seasonal variation in proximate composition, condition index and energy or caloric content of the mussel Tagelus peruvianus were studied in the Gulf of Nicoya, Puntarenas, Costa Rica. From November 2007 to October 2008, a total of 35 to 40 specimens per month were collected. The proximate composition using the AOAC methods was determined. Results showed that the condition index during December, January and May decreased, indicative of two spawning periods and one gonadal resting phase. Soft tissues were respectively characterized by protein (61.9 +/- 4.3%), carbohydrates (15.7 +/- 2.4%), ash (14.0 +/- 1.9%) and lipids (8.5 +/- 1.7%). The average caloric content was 5.0 +/- 0.1 kcal/g. The results showed that the decrease in protein and fat percentage, and calories content, occurred during the spawning seasons. We suggest that T. peruvianus has an optimal nutritional value for human consumption because of the low-fat and moderate protein content.

  5. Enzymatic digestive activity and absorption efficiency in Tagelus dombeii upon Alexandrium catenella exposure

    NASA Astrophysics Data System (ADS)

    Fernández-Reiriz, M. J.; Navarro, J. M.; Cisternas, B. A.; Babarro, J. M. F.; Labarta, U.

    2013-12-01

    We analyzed absorption efficiency (AE) and digestive enzyme activity (amylase, cellulase complex, and laminarinase) of the infaunal bivalve Tagelus dombeii originating from two geographic sites, Corral-Valdivia and Melinka-Aysén, which have different long-term paralytic shellfish poisoning (PSP) exposure rates. We report the effects of past feeding history (origin) on T. dombeii exposed to a mixed diet containing the toxic dinoflagellate Alexandrium catenella and another dinoflagellate-free control diet over a 12-day period in the laboratory. Absorption efficiency values of T. dombeii individuals that experienced PSP exposure in their habitat (Melinka-Aysén) remained unchanged during exposure to toxic food in the laboratory. In contrast, T. dombeii from a non-PSP exposure field site (Corral-Valdivia) showed a significant reduction in AE with toxic exposure time. This study established that the amylase and cellulase complexes were the most important enzymes in the digestive glands of Tagelus from both sites. The temporal evolution of enzymatic activity under toxic diet was fitted to exponential (amylase and cellulase) and to a logarithmic (laminarinase) models. In all fits, we found significant effect of origin in the model parameters. At the beginning of the experiment, higher enzymatic activity was observed for clams from Corral-Valdivia. The amylase activity decreased with time exposure for individuals from Corral and increased for individuals from Melinka. Cellulase activity did not vary over time for clams from Corral, but increased for individuals from Melinka and laminarinase activity decreased over time for individuals from Corral and remained unchanged over time for Melinka. A feeding history of exposure to the dinoflagellate A. catenella was reflected in the digestive responses of both T. dombeii populations.

  6. Bathymetric distribution patterns of Southern Ocean macrofaunal taxa: Bivalvia, Gastropoda, Isopoda and Polychaeta

    NASA Astrophysics Data System (ADS)

    Brandt, Angelika; Linse, Katrin; Schüller, Myriam

    2009-11-01

    The aim of this study is to compare the depth distributions of four major Southern Ocean macrobenthic epi- and infaunal taxa, the Bivalvia, Gastropoda, Isopoda, and Polychaeta, from subtidal to abyssal depth. All literature data up to summer 2008, as well as the unpublished data from the most recent ANDEEP I-III (Antarctic benthic deep-sea biodiversity: colonisation history and recent community patterns) expeditions to the Southern Ocean deep sea are included in the analysis. Benthic invertebrates in the Southern Ocean are known for their wide bathymetric ranges. We analysed the distributions of four of the most abundant and species-rich taxa from intertidal to abyssal (5200 m) depths in depth zones of 100 m. The depth distributions of three macrofaunal classes (Bivalvia, Gastropoda, Polychaeta) and one order (Isopoda) showed distinct differences. In the case of bivalves, gastropods and polychaetes, the number of species per depth zone decreased from the shelf to the slope at around 1000 m depth and then showed stable low numbers. The isopods showed the opposite trend; they were less species rich in the upper 1000 m but increased in species numbers from the slope to bathyal and abyssal depths. Depth ranges of families of the studied taxa (Bivalvia: 31 families, Gastropoda: 60, Isopoda: 32, and Polychaeta: 46 families) were compiled and illustrated. At present vast areas of the deep sea in the Southern Ocean remain unexplored and species accumulation curves showed that only a fraction of the species have been discovered to date. We anticipate that further investigations will greatly increase the number of species known in the Southern Ocean deep sea.

  7. Polycyclic aromatic hydrocarbons in water, mussels ( Brachidontes sp., Tagelus sp.) and fish ( Odontesthes sp.) from Bahía Blanca Estuary, Argentina

    NASA Astrophysics Data System (ADS)

    Arias, Andres H.; Spetter, Carla V.; Freije, Rubén H.; Marcovecchio, Jorge E.

    2009-10-01

    Polycyclic aromatic hydrocarbons (PAHs), one of the major groups of anthropogenic environmental pollutants, were firstly identified and measured in coastal waters, native mussels and fish of an industrialized South American estuary. The aim of this study was to measure the PAHs concentrations and evaluate distribution and sources in surface seawater, native mussels ( Brachidontes sp. and Tagelus sp.) and fish ( Odontesthes sp.) from various coastal sites of the Bahía Blanca Estuary, in order to put the estuary in a global context and assess it ecotoxicological risk. For this, 40 samples of surface water were collected between August 2004 and February 2006 and analyzed by GC/MS for 17 PAHs, including the 16 EPA priority PAHs. In addition, main physicochemical parameters, nutrients and pigments were simultaneously obtained as key parameters to evaluate possible relationships. Finally, several native mussel communities and fish specimens were also analyzed for PAHs contents. The area of study is located at the Argentinean coast and presents an intensive human and industrial activity at the north shoreline. Total PAHs (Σ17 PAHs) in whole surface waters ranged from undetected to more than 4 μg/l. Seasonal PAHs levels relationship with master parameters suggested a relationship between the phytoplankton microbiological cycling and the dissolved/suspended PAHs occurrence in water. In addition, Cluster Analysis was performed to identify the homogeneous groups of individual PAHs in water and Principal Component Analysis to extract underlying common factors. The result of PCA was similar to that of the cluster analysis; both could differentiate two subsets of pyrogenic sources and a petrogenic origin. PAHs levels in indigenous mussels ( Brachidontes sp. and Tagelus sp.) ranged from 348 to 1597 ng/g (dry weight). Fish specimens ( Odontesthes sp.) showed a mean concentration of 1095 ng/g d.w. in whole tissues. Mussel source ratios and PCA results were in good agreement with

  8. Decapoda from Antipatharia, Gorgonaria and Bivalvia at the Cape Verde Islands

    NASA Astrophysics Data System (ADS)

    Wirtz, Peter; d'Udekem-d'Acoz, Cédric

    2001-07-01

    The shrimps Balssia gasti, Palaemonella atlantica, Periclimenes platalea, Periclimenes wirtzi, Pontonia manningi, Pontonia pinnophylax, Pontonia sp. nov., Pseudocoutierea wirtzi and the crabs Galathea intermedia and Micropisa ovata were collected from Antipatharia, Gorgonaria and Bivalvia at São Tiago Island, Republic of Cape Verde. Most of the associations between decapods and invertebrate hosts are reported here for the first time. This is also the first record of B. gasti and of P. wirtzi for the Cape Verde Islands. We briefly review the literature on littoral decapod crustaceans of the Cape Verde Islands.

  9. Nutritional value of winter foods for whooping cranes

    USGS Publications Warehouse

    Nelson, J.T.; Slack, R.D.; Gee, G.F.

    1996-01-01

    We measured metabolizable energy and digestibility of Whooping Crane (Grus americana) winter foods (blue crab [Callinectes sapidus]), common Rangia clam (Rangia cuneata), wolfberry fruit (Lycium carolinianurn [wolfberry]), and live oak acorn (Ouercus virginiana [acorn])] with feeding trials to captive-reared Whooping Cranes. Apparent metabolizable energy coefficients (expressed as %) were for crab (34.1), Rangia clam (75.0), wolfberry (44.8), and acorn (43.2). Digestion coefficients for protein were lower for plant foods (48.9 and 53.4) than for animal foods (69.4 and 75.2). Digestion coefficients for total lipid differed among foods: highest and lowest lipid digestibility was for acorn (87.2) and wolfberry (60.0), respectively. We also determined total energy and percent protein and lipid of the four foods and stout razor clam (Tagelus plebeius); gross energy was 2-5x higher for acorn and wolfberry on a dry-weight basis than for blue crab and stout razor clam. Crude protein was 2-3x higher for blue crab than for wolfberry and stout razor clam. Wolfberry ranked the highest of five foods for metabolic energy and total lipid nutrient availability per kg of food ingested, and blue crab ranked highest for crude protein availability.

  10. Fauna Europaea: Mollusca – Bivalvia

    PubMed Central

    2015-01-01

    Abstract Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies, which is much more than the originally projected number of 100,000 species. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation and education. For the Mollusca-Bivalvia, data from 5 families (Margaritiferidae, Unionidae, Sphaeriidae, Cyrenidae, Dreissenidae) containing 55 species are included in this paper. European freshwater bivalves belong to the Orders Unionoida and Cardiida. All the European unionoids are included in the superfamily Unionoidea, the freshwater mussels or naiads. The European cardiids belong to the following three superfamilies: Cardioidea, Cyrenoidea and Dreissenoidea. Among the Unionoidea there are the most imperilled animal groups on the planet while the Cardioidea includes the cosmopolitan genus Pisidium, the Cyrenoidea the Asiatic clam (Corbicula fluminea) and the Dreissenoidea the famous invasive zebra mussel (Dreissena polymorpha). Basic information is summarized on their taxonomy and biology. Tabulations include a complete list of the current estimated families, genera and species. PMID:26311403

  11. Evidence for contrasting accumulation pattern of cadmium in relation to other elements in Senilia senilis and Tagelus adansoni from the Bijagós archipelago, Guinea-Bissau.

    PubMed

    Catry, Teresa; Figueira, Paula; Carvalho, Lina; Monteiro, Rui; Coelho, Pedro; Lourenço, Pedro Miguel; Catry, Paulo; Tchantchalam, Quintino; Catry, Inês; Botelho, Maria J; Pereira, Eduarda; Granadeiro, José Pedro; Vale, Carlos

    2017-11-01

    Shellfish harvesting in intertidal areas is a widespread and economically important activity in many countries across West Africa. However, in some areas, there is virtually no information concerning the levels of contaminants (and other elements related to nutritional aspects) in the harvested species. We collected sediments and several individuals of the West African bloody cockle Senilia senilis and of the razor clam Tagelus adansoni during the dry season of 2015 nearby three islands in the Bijagós archipelago, Guinea-Bissau. Aluminium, Ca, Fe, Mg, As, Cd, Co, Cr, Cu, Mn, Ni, Pb and Zn were determined in sediments and whole soft tissues of the two bivalves. Sediments showed uniformly low trace element concentrations, pointing to an ecosystem with low levels of trace element contamination. T. adansoni presented higher concentrations of most elements than S. senilis, with the exception of Cd that showed up to 40 times higher values in S. senilis than in T. adansoni from the same sites. Furthermore, Cd concentrations (25±8.7 mg kg -1 , dw) in S. senilis are clearly above the maximum level established for human consumption. Future studies should clarify whether biological factors are the major responsible for this unusual situation.

  12. Gastropoda-Bivalvia Fauna And Neogene-Quaternary Stratigraphy of the Southwest of Dardanelles (Çanakkale-NWAnatolia)

    NASA Astrophysics Data System (ADS)

    Kapan, Sevinç; Kabasakal, Sinem

    2016-04-01

    Gastropoda-Bivalvia Fauna And Neogene-Quaternary Stratigraphy of the Southwest of Dardanelles (Çanakkale-NWAnatolia) Sevinç KAPAN, Sinem KABASAKAL, Çanakkale Onsekiz Mart University, Engineering Faculty, Geological Engineering Department sevinckapan_yesilyurt@hotmail.com In this study, paleontology and stratigraphy of Neogene and Quaternary units around south of the Dardanelles have been examined using Gastropoda and Bivalvia fauna. In the investigation area, the base of the sediments that belongs to Neogene, consist of the volcanics which are formed with basalts, andesites and tuff. Neogene begins unconformity with basal conglomerate which are formed with basalt and tuff gravels. The measurable thickness of the Neogene sediments is approximately 200meters in total. First fossiliferius level which consist of Lymnocardium (Euxinicardium) nobile Sabba has showed similarities with the Pontian (Late Miocene) fauna of the Eastern Paratethys. The existence of Melanopsis and Psidium species indicate that the basin has been brackish water feeding by fresh water in the Early Pliocene. Theodoxus fluviatilis (Linne), Theodoxus (Calvertia) aff. imbricata Brusina, Theodoxus (Calvertia) licherdopoli scriptus (Stefanescu), Viviparus mammatus (Stefanescu), Valvata (Valavata) sulekiana Brusina, Valvata (Cincinna) crusitensis Fontannes, Hydrobia cf grandis Cobalcescu, Hydrobia ventrosa Monfort, Melanopsis (Melanopsis) cf. bergeroni Stefanescu, , Melanopsis (Melanopsis) sandbergeri rumana Tournouer, Melanopsis (Canthidomus) hybostoma anili Taner, Melanopsis (Canthidomus) hybostoma amaradica Fontannes, Melanopsis (Canthidomus) lanceolata Neumayr, Amphimelania fossariformis (Tournouer), Melanoides tuberculata monolithica (Bukowski), Radix (Radix) peregra (Müller), Planorbarius thiollierei (Michaud), Potamida (Potamida) craiovensis craiovensis (Tournouer), Potamida (Potamida) berbestiensis (Fontannes), Unio pristinus davilai Porumbaru, Unio subexquisitus Jatzko, Anadonta zmaji

  13. Evolution of active host-attraction strategies in the freshwater mussel tribe Lampsilini (Bivalvia: Unionidae).

    PubMed

    Zanatta, David T; Murphy, Robert W

    2006-10-01

    Most freshwater mussels (Bivalvia: Unionoida) require a host, usually a fish, to complete their life cycle. Most species of mussels show adaptations that increase the chances of glochidia larvae contacting a host. We investigated the evolutionary relationships of the freshwater mussel tribe Lampsilini including 49 of the approximately 100 extant species including 21 of the 24 recognized genera. Mitochondrial DNA sequence data (COI, 16S, and ND1) were used to create a molecular phylogeny for these species. Parsimony and Bayesian likelihood topologies revealed that the use of an active lure arose early in the evolution of the Lampsiline mussels. The mantle flap lure appears to have been the first to evolve with other lure types being derived from this condition. Apparently, lures were lost independently in several clades. Hypotheses are discussed as to how some of these lure strategies may have evolved in response to host fish prey preferences.

  14. Contrasting Physiological Responses of Two Populations of the Razor Clam Tagelus dombeii with Different Histories of Exposure to Paralytic Shellfish Poisoning (PSP)

    PubMed Central

    Navarro, Jorge M.; González, Katerina; Cisternas, Barbara; López, Jorge A.; Chaparro, Oscar R.; Segura, Cristian J.; Córdova, Marco; Suárez-Isla, Benjamín; Fernandez-Reiriz, María J.; Labarta, Uxio

    2014-01-01

    This study describes the physiological performance of two populations of the razor clam Tagelus dombeii from two geographic areas with different histories of exposure to paralytic shellfish poisoning (PSP) linked to the toxic dinoflagellate Alexandrium catenella. Clams from Melinka-Aysén, which are frequently exposed to PSP, were not affected by the presence of toxins in the diet. However, clams from Corral-Valdivia, which have never been exposed to PSP, exhibited significantly reduced filtration activity and absorption, affecting the energy allocated to scope for growth (SFG). Ammonia excretion and oxygen uptake were not affected significantly by the presence of A. catenella in the diet. Measurements of energy acquisition and expenditure were performed during a 12-day intoxication period. According to three-way repeated measure ANOVAs, the origin of the clams had a highly significant effect on all physiological variables, and the interaction between diet and origin was significant for the clearance and absorption rates and for the scope for growth. The scope for growth index showed similar positive values for both the toxic and non-toxic individuals from the Melinka-Aysén population. However, it was significantly reduced in individuals from Corral-Valdivia when exposed to the diet containing A. catenella. The absence of differences between the physiological response of the toxic and non-toxic clams from Melinka-Aysén may be related to the frequent presence of A. catenella in the environment, indicating that this bivalve does not suffer negative consequences from PSP. By contrast, A. catenella has a negative effect on the physiological performance, primarily on the energy gained from the environment, on T. dombeii from Corral-Valdivia. This study supports the hypothesis that the history of PSP exposure plays an important role in the physiological performance and fitness of filter feeding bivalves. PMID:25153329

  15. Molecular phylogeny of Pholadoidea Lamarck, 1809 supports a single origin for xylotrophy (wood feeding) and xylotrophic bacterial endosymbiosis in Bivalvia.

    PubMed

    Distel, Daniel L; Amin, Mehwish; Burgoyne, Adam; Linton, Eric; Mamangkey, Gustaf; Morrill, Wendy; Nove, John; Wood, Nicole; Yang, Joyce

    2011-11-01

    The ability to consume wood as food (xylotrophy) is unusual among animals. In terrestrial environments, termites and other xylotrophic insects are the principle wood consumers while in marine environments wood-boring bivalves fulfill this role. However, the evolutionary origin of wood feeding in bivalves has remained largely unexplored. Here we provide data indicating that xylotrophy has arisen just once in Bivalvia in a single wood-feeding bivalve lineage that subsequently diversified into distinct shallow- and deep-water branches, both of which have been broadly successful in colonizing the world's oceans. These data also suggest that the appearance of this remarkable life habit was approximately coincident with the acquisition of bacterial endosymbionts. Here we generate a robust phylogeny for xylotrophic bivalves and related species based on sequences of small and large subunit nuclear rRNA genes. We then trace the distribution among the modern taxa of morphological characters and character states associated with xylotrophy and xylotrepesis (wood-boring) and use a parsimony-based method to infer their ancestral states. Based on these ancestral state reconstructions we propose a set of plausible hypotheses describing the evolution of symbiotic xylotrophy in Bivalvia. Within this context, we reinterpret one of the most remarkable progressions in bivalve evolution, the transformation of the "typical" myoid body plan to create a unique lineage of worm-like, tube-forming, wood-feeding clams. The well-supported phylogeny presented here is inconsistent with most taxonomic treatments for xylotrophic bivalves, indicating that the bivalve family Pholadidae and the subfamilies Teredininae and Bankiinae of the family Teredinidae are non-monophyletic, and that the principle traits used for their taxonomic diagnosis are phylogenetically misleading. Copyright © 2011 Elsevier Inc. All rights reserved.

  16. Systematics and distribution of Cristaria plicata (Bivalvia, Unionidae) from the Russian Far East

    PubMed Central

    Klishko, Olga K.; Lopes-Lima, Manuel; Froufe, Elsa; Bogan, Arthur E.; Abakumova, Vera Y.

    2016-01-01

    Abstract The number of anodontine bivalve species placed in the genus Cristaria (Bivalvia, Unionidae) from the Russian Far East is still not stable among authors. Some recognize only one valid species Cristaria plicata (Leach, 1815) while others accept two additional species, Cristaria tuberculata Schumacher, 1817 and Cristaria herculea (Middendorff, 1847). In the present study, these taxonomic doubts are addressed using analyses of mitochondrial DNA sequences and shell morphometry. No significant differences have been revealed by the COI DNA sequences or the main statistical morphometric indices from the three Cristaria forms. In the specimens analysed, changes in shell morphometry with age suggest that original descriptions of the different forms may be attributed solely to differences in age and sex. We consider that Cristaria plicata, Cristaria tuberculata and Cristaria herculea from the Russian Far East should be considered as a single species, namely Cristaria plicata (Leach, 1815), with Cristaria tuberculata and Cristaria herculea as junior synonyms. The geographic range of Cristaria plicata and its conservation status are also presented here. PMID:27110206

  17. The Preliminary Study of Organochlorine Pesticide Residues on Sediments of Bivalvia Fishing Ground at Eastern Part of Coastal Semarang

    NASA Astrophysics Data System (ADS)

    Adhi Suryono, Chrisna; Subagyo; Setyati, Wilis Ari; Sri Susilo, Endang; Rochaddi, Baskoro; Triaji Mahendrajaya, Robertus

    2018-02-01

    This paper presents the occurrence level of organochlorine contamination in marine sediments of Semarang coastal areas as a fishing ground of Bivalvia. Five compounds (Heptachlor, Aldrin, Endosulfan, Endrin and pp-DDT) of contaminant have been determined in the sediments surface of Semarang coastal waters. The samples were then analyzed by using gas chromatography and followed by using the method of Standard Method Examination. The result showed that the average concentration of organochlorine pesticides Heptachlor, Aldrin, Endosulfan, Endrin and pp-DDT were 25.5, bellow detected, 7.1, 37.2, 28.6 μ g/L, respectively. The high concentration of pesticide showed on Endrin (65,84 ppb), pp-DDT (29,53 μ g/L), and heptachlor (25,45 μ g/L). The low concentrations were detected on aldrin (bellow detected) and endosulfan (0,92 μ g/L). The concentration of organochlorine pesticides in these areas might contribute on four rivers which deposited the sediment in these coastal waters

  18. Molecular phylogeny of pearl oysters and their relatives (Mollusca, Bivalvia, Pterioidea)

    PubMed Central

    2010-01-01

    Background The superfamily Pterioidea is a morphologically and ecologically diverse lineage of epifaunal marine bivalves distributed throughout the tropical and subtropical continental shelf regions. This group includes commercially important pearl culture species and model organisms used for medical studies of biomineralization. Recent morphological treatment of selected pterioideans and molecular phylogenetic analyses of higher-level relationships in Bivalvia have challenged the traditional view that pterioidean families are monophyletic. This issue is examined here in light of molecular data sets composed of DNA sequences for nuclear and mitochondrial loci, and a published character data set of anatomical and shell morphological characters. Results The present study is the first comprehensive species-level analysis of the Pterioidea to produce a well-resolved, robust phylogenetic hypothesis for nearly all extant taxa. The data were analyzed for potential biases due to taxon and character sampling, and idiosyncracies of different molecular evolutionary processes. The congruence and contribution of different partitions were quantified, and the sensitivity of clade stability to alignment parameters was explored. Conclusions Four primary conclusions were reached: (1) the results strongly supported the monophyly of the Pterioidea; (2) none of the previously defined families (except for the monotypic Pulvinitidae) were monophyletic; (3) the arrangement of the genera was novel and unanticipated, however strongly supported and robust to changes in alignment parameters; and (4) optimizing key morphological characters onto topologies derived from the analysis of molecular data revealed many instances of homoplasy and uncovered synapomorphies for major nodes. Additionally, a complete species-level sampling of the genus Pinctada provided further insights into the on-going controversy regarding the taxonomic identity of major pearl culture species. PMID:21059254

  19. DNA barcoding for species identification in deep-sea clams (Mollusca: Bivalvia: Vesicomyidae).

    PubMed

    Liu, Jun; Zhang, Haibin

    2018-01-15

    Deep-sea clams (Bivalvia: Vesicomyidae) have been found in reduced environments over the world oceans, but taxonomy of this group remains confusing at species and supraspecific levels due to their high-morphological similarity and plasticity. In the present study, we collected mitochondrial COI sequences to evaluate the utility of DNA barcoding on identifying vesicomyid species. COI dataset identified 56 well-supported putative species/operational taxonomic units (OTUs), approximately covering half of the extant vesicomyid species. One species (OTU2) was first detected, and may represent a new species. Average distances between species ranged from 1.65 to 29.64%, generally higher than average intraspecific distances (0-1.41%) when excluding Pliocardia sp.10 cf. venusta (average intraspecific distance 1.91%). Local barcoding gap existed in 33 of the 35 species when comparing distances of maximum interspecific and minimum interspecific distances with two exceptions (Abyssogena southwardae and Calyptogena rectimargo-starobogatovi). The barcode index number (BIN) system determined 41 of the 56 species/OTUs, each with a unique BIN, indicating their validity. Three species were found to have two BINs, together with their high level of intraspecific variation, implying cryptic diversity within them. Although fewer 16 S sequences were collected, similar results were obtained. Nineteen putative species were determined and no overlap observed between intra- and inter-specific variation. Implications of DNA barcoding for the Vesicomyidae taxonomy were then discussed. Findings of this study will provide important evidence for taxonomic revision in this problematic clam group, and accelerate the discovery of new vesicomyid species in the future.

  20. Unionid bivalves (Mollusca: Bivalvia: Unionidae) of Presque Isle Bay, Erie, Pennsylvania

    USGS Publications Warehouse

    Masteller, E.C.; Maleski, K.R.; Schloesser, D.W.

    1993-01-01

    The purpose of this study was to determine species composition and relative abundance of unionid bivalves (Mollusca: Bivalvia: Unionidae) in Presque Isle Bay, Erie, Pennsylvania 1990-1992. This information was compared with data from the only other extensive survey of unionids in the bay conducted in 1909-1911 (Ortmann 1919) to assess changes over the 80 years preceding the present study. A total of 1,540 individuals representing 18 species were collected in 1990-1992. Five relatively common species (between 7 and 42% of total individuals), six uncommon species (2 and 6%), and seven rare species (<1%) were found. The rare species were Anodontoides ferussacianus, Lasmigona costata, Ligumia recta, Ptychobranchus fasciolaris, Quadrula pustulosa pustulosa, Strophitus undaulatus, and Truncilla donaciformis. Five of the species found in Presque Isle Bay (Leptodea fragilis, Ligumia nasuta, Potamilus alatus, Quadrula quadrula, and Truncilla donaciformis) are listed as critically imperiled and one species (Truncilla truncata) as extirpated in the State of Pennsylvania by the Western Pennsylvania Conservancy. Comparisons between unionid populations in 1909-1911 and 1990-1992 indicate few substantial changes occurred during the past 80 years. A total of 22 species were found; 21 in 1909-1911 and 18 in 1990-1992. Seventeen species were found in both studies, an additional four in 1909-1911 and one in 1990-1992. The relative abundance of 11 of the 17 species found in both studies remained stable (i.e., common or uncommon) over the past 80 years. Only four species listed as uncommon in 1909-1911 were listed as rare in 1990-1992. However, the invasion of the zebra mussel (Dreissena polymorpha) is considered a threat to the continued existence of the entire Unionidae fauna in Presque Isle Bay, a unique habitat of the Great Lakes.

  1. Vesicomyinae (Bivalvia: Vesicomyidae) of the Kuril-Kamchatka Trench and adjacent abyssal regions

    NASA Astrophysics Data System (ADS)

    Krylova, Elena M.; Kamenev, Gennady M.; Vladychenskaya, Irina P.; Petrov, Nikolai B.

    2015-01-01

    Representatives of the subfamily Vesicomyinae (Bivalvia, Vesicomyidae) are tiny deep-sea molluscs distributed worldwide and reaching huge abundances of hundreds and thousands of specimens in trawl catches. During the German-Russian deep-sea expedition KuramBio (R/V Sonne, 2012) for the first time two vesicomyin species were collected from the abyssal plain adjacent to the Kuril-Kamchatka Trench from the depths of 4861-5787 m, Vesicomya pacifica (Smith, 1885) and "Vesicomya" filatovae sp.n. Two species of vesicomyins, V. sergeeviFilatova, 1971 and V. profundiFilatova, 1971, which were previously reported from the hadal of the Kuril-Kamchatka Trench, were not collected at the abyssal depth despite of the close geographical proximity of the sampling area to their distribution ranges. Altogether nine species of vesicomyins are recorded now from the West and Indo-West Pacific; data on distribution and morpho-anatomical characters of these species are provided. Taxonomic description of V. pacifica is revised including information on its soft part anatomy, new localities and COI sequences. For the first time for a vesicomyin bivalve molecular data is given for a species with an explicit morphological description and unambiguous taxonomic affiliation. Molecular analysis of 160 published COI sequences of vesicomyids and newly obtained molecular data on V. pacifica showed that V. pacifica and two undescribed vesicomyin species forming a monophyletic clade which exhibits sister relationships with the Pliocardiinae, the group of chemosymbiotic vesicomyids. "Vesicomya" filatovae sp.n. is provisionally assigned to the genus Vesicomya (s.l.) until additional morphological and molecular data are obtained. It differs from Vesicomya s.s. by a broader hinge margin with more radiating teeth and the presence of only one pair of demibranchs.

  2. Food selection among Atlantic Coast seaducks in relation to historic food habits

    USGS Publications Warehouse

    Perry, M.C.; Osenton, P.C.; Wells-Berlin, A. M.; Kidwell, D.M.

    2005-01-01

    Food selection among Atlantic Coast seaducks during 1999-2005 was determined from hunter-killed ducks and compared to data from historic food habits file (1885-1985) for major migrational and wintering areas in the Atlantic Flyway. Food selection was determined by analyses of the gullet (esophagus and proventriculus) and gizzard of 860 ducks and summarized by aggregate percent for each species. When sample size was adequate comparisons were made among age and sex groupings and also among local sites in major habitat areas. Common eiders in Maine and the Canadian Maritimes fed predominantly (53%) on the blue mussel (Mytilus edulis). Scoters in Massachusetts, Maine, and the Canadian Maritimes fed predominantly on the blue mussel (46%), Atlantic jackknife clam (Ensis directus; 19%), and Atlantic surf clam (Spisula solidissima; 15%), whereas scoters in the Chesapeake Bay fed predominantly on hooked mussel (Ischadium recurvum; 42%), the stout razor clam (Tagelus plebeius; 22%), and dwarf surf clam (Mulinia lateralis; 15%). The amethyst gem clam (Gemma gemma) was the predominant food (45%) of long-tailed ducks in Chesapeake Bay. Buffleheads and common goldeneyes fed on a mixed diet of mollusks and soft bodied invertebrates (amphipods, isopods and polychaetes). No major differences were noticed between the sexes in regard to food selection in any of the wintering areas. Comparisons to historic food habits in all areas failed to detect major differences. However, several invertebrate species recorded in historic samples were not found in current samples and two invasive species (Atlantic Rangia, Rangia cuneata and green crab, Carcinas maenas) were recorded in modem samples, but not in historic samples. Benthic sampling in areas where seaducks were collected showed a close correlation between consumption and availability. Each seaduck species appears to fill a unique niche in regard to feeding ecology, although there is much overlap of prey species selected. Understanding

  3. Factors driving changes in freshwater mussel (Bivalvia, Unionida) diversity and distribution in Peninsular Malaysia.

    PubMed

    Zieritz, Alexandra; Lopes-Lima, Manuel; Bogan, Arthur E; Sousa, Ronaldo; Walton, Samuel; Rahim, Khairul Adha A; Wilson, John-James; Ng, Pei-Yin; Froufe, Elsa; McGowan, Suzanne

    2016-11-15

    Freshwater mussels (Bivalvia, Unionida) fulfil important ecosystem functions and are one of the most threatened freshwater taxa globally. Knowledge of freshwater mussel diversity, distribution and ecology in Peninsular Malaysia is extremely poor, and the conservation status of half of the species presumed to occur in the region has yet to be assessed. We conducted the first comprehensive assessment of Peninsular Malaysia's freshwater mussels based on species presence/absence and environmental data collected from 155 sites spanning all major river catchments and diverse habitat types. Through an integrative morphological-molecular approach we recognised nine native and one widespread non-native species, i.e. Sinanodonta woodiana. Two species, i.e. Pilsbryoconcha compressa and Pseudodon cambodjensis, had not been previously recorded from Malaysia, which is likely a result of morphological misidentifications of historical records. Due to their restriction to single river catchments and declining distributions, Hyriopsis bialata, possibly endemic to Peninsular Malaysia, Ensidens ingallsianus, possibly already extinct in the peninsula, and Rectidens sumatrensis, particularly require conservation attention. Equally, the Pahang, the Perak and the north-western river catchments are of particular conservation value due to the presence of a globally unique freshwater mussel fauna. Statistical relationships of 15 water quality parameters and mussel presence/absence identified acidification and nutrient pollution (eutrophication) as the most important anthropogenic factors threatening freshwater mussel diversity in Peninsular Malaysia. These factors can be linked to atmospheric pollution, deforestation, oil-palm plantations and a lack of functioning waste water treatment, and could be mitigated by establishing riparian buffers and improving waste water treatment for rivers running through agricultural and residential land. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. The Pleurobemini (Bivalvia: Unionida) revisited: Molecular species delineation using a mitochondrial DNA gene reveals multiple conspecifics and undescribed species

    USGS Publications Warehouse

    Inoue, Kentaro; Hayes, David M.; Harris, John L.; Johnson, Nathan A.; Morrison, Cheryl L.; Eackles, Michael S.; King, Tim; Jones, Jess W.; Hallerman, Eric M.; Christian, Alan D.; Randklev, Charles R.

    2018-01-01

    The Pleurobemini (Bivalvia: Unionida) represent approximately one-third of freshwater mussel diversity in North America. Species identification within this group is challenging due to morphological convergence and phenotypic plasticity. Accurate species identification, including characterization of currently unrecognized taxa, is required to develop effective conservation strategies because many species in the group are imperiled. We examined 573 cox1 sequences from 110 currently recognized species (including 13 Fusconaia and 21 Pleurobema species) to understand phylogenetic relationships among pleurobemine species (mainly Fusconaia and Pleurobema) and to delineate species boundaries. The results of phylogenetic analyses showed no geographic structure within widespread species and illustrated a close relationship between Elliptio lanceolata and Parvaspina collina. Constraint tests supported monophyly of the genera Fusconaia and Pleurobema, including the subgenus P. (Sintoxia). Furthermore, results revealed multiple conspecifics, including P. hanleyianum and P. troschelianum, P. chattanoogaense and P. decisum, P. clava and P. oviforme, P. rubrum and P. sintoxia, F. askewi and F. lananensis, and F. cerina and F. flava. Species delimitation analyses identified three currently unrecognized taxa (two in Fusconaia and one in Pleurobema). Further investigation using additional genetic markers and other lines of evidence (e.g., morphology, life history, ecology) are necessary before any taxonomic changes are formalized.

  5. Molluscs production associated to lunar-tide cycle: a case study in Paraíba State under ethnoecology viewpoint

    PubMed Central

    Nishida, Alberto K; Nordi, Nivaldo; Alves, Rômulo RN

    2006-01-01

    Molluscs have been for a long time a very important food resource for humans. Therefore, oysters, clams, and mussels are highly required at seafood markets. Like any commercial food, it is necessary that molluscs present good quality standards, concerning some criteria such as amount of meat and appearance. In bivalves, condition index or fattening index is considered a satisfactory method for estimating the amount of meat related to the shell cavity. Molluscs gatherers of Paraíba State coast, northeastern Brazil, state that molluscan meat production increases during spring tide (designated by them as maré de lançamento) in opposition to the meat decrease which happens during neap tide (maré de quebramento) (they are designated technically in Portuguese as maré de sizígia and maré de quadratura, respectively). Weperformed a survey on the production of unha-de-velho or 'oldman'snail' (Tagelus plebeius) caught by molluscs gatherers in the estuary of River Paraíba do Norte, by observing locally their work, applying questionnaires, searching for a possible scientific relation of that molluscs condition to the gatherers empirical statement. Thus, we estimatedthe molluscs condition index through the method of solids percentage determination. We studied their work and the molluscs condition index during a full lunar-tide cycle. Determinations were carried out between 2nd September and 20th October, 1998, through 20 catches performed to obtain condition index from 400 bivalves. We observed that several biotic and abiotic ecological factors, namely reproduction cycle, biochemical components variations, animal size, and even parasitism, may affect the animal condition index. Despite this aspect, our present results confirmed a high overlapping (80%) of the condition index curve with lunar-tide cycle, in agreement with the gatherers statement. Although we recognize the need for formulating and testing other hypotheses, we consider a priori that the gatherers empirical

  6. The Pleurobemini (Bivalvia: Unionida) revisited: Molecular species delineation using a mitochondrial DNA gene reveals multiple conspecifics and undescribed species

    USGS Publications Warehouse

    Inoue, Kentaro; Hayes, David M.; Harris, John L.; Johnson, Nathan A.; Morrison, Cheryl L.; Eackles, Michael S.; King, Tim; Jones, Jess W.; Hallerman, Eric M.; Christian, Alan D.; Randklev, Charles R.

    2018-01-01

    The Pleurobemini (Bivalvia: Unionida) represent approximately one-third of freshwater mussel diversity in North America. Species identification within this group is challenging due to morphological convergence and phenotypic plasticity. Accurate species identification, including characterisation of currently unrecognised taxa, is required to develop effective conservation strategies because many species in the group are imperiled. We examined 575 cox1 sequences from 110 currently recognised species (including 13 Fusconaia and 21 Pleurobema species) to understand phylogenetic relationships among pleurobemine species (mainly Fusconaia and Pleurobema) and to delineate species boundaries. The results of phylogenetic analyses showed no geographic structure within widespread species and illustrated a close relationship between Elliptio lanceolata and Parvaspina collina. Constraint tests supported monophyly of the genera Fusconaia and Pleurobema, including the subgenus P. (Sintoxia). Furthermore, results revealed multiple conspecifics, including P. hanleyianum and P. troschelianum, P. chattanoogaense and P. decisum, P. clava and P. oviforme, P. rubrum and P. sintoxia, F. askewi and F. lananensis, and F. cerina and F. flava. Species delimitation analyses identified three currently unrecognised taxa (two in Fusconaia and one in Pleurobema). Further investigation using additional genetic markers and other lines of evidence (e.g. morphology, life history, ecology) are necessary before any taxonomic changes are formalised.

  7. Reproductive biology of blood cockle Anadara granosa (Bivalvia: Arcidae) in the northern region of the Strait of Malacca

    NASA Astrophysics Data System (ADS)

    Khalil, Munawar; Yasin, Zulfigar; Hwai, Tan Shau

    2017-03-01

    A study on the reproductive cycle of the blood cockle Anadara granosa (Bivalvia: Arcidae) was conducted at three different areas in the northern region of the Strait of Malacca. A total of 1,920 samples of adult A. granosa (38-71 mm length) were collected from June 2009 until September 2010. Qualitative techniques (gonadal microscopic fresh smear test and histology analysis) as well as quantitative techniques (analysis of condition index and gonadal index) were used to predict monthly gonadal development stages of A. granosa. The gonadal index of A. granosa from Banda Aceh (Indonesia) ( r = 0.469, P > 0.05) and Pulau Pinang (Malaysia) ( r = 0.123, P > 0.05) did not show any correlation to their condition index, whereas the gonadal index of A. granosa from Lhokseumawe (Indonesia) ( r = 0.609, P < 0.05) showed moderate positive correlation to the condition index. During the 16 month sampling period, four reproductive cycles were observed: each from three to six months. The process of releasing gametes is termed dribble spawning, and is the same in all populations. The principle component analysis (PCA) indicated that A. granosa reproduction was affected by interaction between internal physiological factors and indigenous environmental factors. In all sampling areas, phytoplankton density played a key role in the reproductive cycle in A. granosa. Information on the reproductive biology of this species is essential for species management and to improve the sustainability practices of the fisheries industry. These findings will provide basic information on the biology of the blood cockle A. granosa for stock management in the region.

  8. Molecular phylogenetic analysis supports a Gondwanan origin of the Hyriidae (Mollusca: Bivalvia: Unionida) and the paraphyly of Australasian taxa.

    PubMed

    Graf, Daniel L; Jones, Hugh; Geneva, Anthony J; Pfeiffer, John M; Klunzinger, Michael W

    2015-04-01

    The freshwater mussel family Hyriidae (Mollusca: Bivalvia: Unionida) has a disjunct trans-Pacific distribution in Australasia and South America. Previous phylogenetic analyses have estimated the evolutionary relationships of the family and the major infra-familial taxa (Velesunioninae and Hyriinae: Hyridellini in Australia; Hyriinae: Hyriini, Castaliini, and Rhipidodontini in South America), but taxon and character sampling have been too incomplete to support a predictive classification or allow testing of biogeographical hypotheses. We sampled 30 freshwater mussel individuals representing the aforementioned hyriid taxa, as well as outgroup species representing the five other freshwater mussel families and their marine sister group (order Trigoniida). Our ingroup included representatives of all Australian genera. Phylogenetic relationships were estimated from three gene fragments (nuclear 28S, COI and 16S mtDNA) using maximum parsimony, maximum likelihood, and Bayesian inference, and we applied a Bayesian relaxed clock model calibrated with fossil dates to estimate node ages. Our analyses found good support for monophyly of the Hyriidae and the subfamilies and tribes, as well as the paraphyly of the Australasian taxa (Velesunioninae, (Hyridellini, (Rhipidodontini, (Castaliini, Hyriini)))). The Hyriidae was recovered as sister to a clade comprised of all other Recent freshwater mussel families. Our molecular date estimation supported Cretaceous origins of the major hyriid clades, pre-dating the Tertiary isolation of South America from Antarctica/Australia. We hypothesize that early diversification of the Hyriidae was driven by terrestrial barriers on Gondwana rather than marine barriers following disintegration of the super-continent. Copyright © 2015 Elsevier Inc. All rights reserved.

  9. Influence of Environmental and Genetic Factors Linked to Celiac Disease Risk on Infant Gut Colonization by Bacteroides Species▿

    PubMed Central

    Sánchez, Ester; De Palma, Giada; Capilla, Amalia; Nova, Esther; Pozo, Tamara; Castillejo, Gemma; Varea, Vicente; Marcos, Ascensión; Garrote, José Antonio; Polanco, Isabel; López, Ana; Ribes-Koninckx, Carmen; García-Novo, Maria Dolores; Calvo, Carmen; Ortigosa, Luis; Palau, Francesc; Sanz, Yolanda

    2011-01-01

    Celiac disease (CD) is an immune-mediated enteropathy involving genetic and environmental factors whose interaction might influence disease risk. The aim of this study was to determine the effects of milk-feeding practices and the HLA-DQ genotype on intestinal colonization of Bacteroides species in infants at risk of CD development. This study included 75 full-term newborns with at least one first-degree relative suffering from CD. Infants were classified according to milk-feeding practice (breast-feeding or formula feeding) and HLA-DQ genotype (high or low genetic risk). Stools were analyzed at 7 days, 1 month, and 4 months by PCR and denaturing gradient gel electrophoresis (DGGE). The Bacteroides species diversity index was higher in formula-fed infants than in breast-fed infants. Breast-fed infants showed a higher prevalence of Bacteroides uniformis at 1 and 4 months of age, while formula-fed infants had a higher prevalence of B. intestinalis at all sampling times, of B. caccae at 7 days and 4 months, and of B. plebeius at 4 months. Infants with high genetic risk showed a higher prevalence of B. vulgatus, while those with low genetic risk showed a higher prevalence of B. ovatus, B. plebeius, and B. uniformis. Among breast-fed infants, the prevalence of B. uniformis was higher in those with low genetic risk than in those with high genetic risk. Among formula-fed infants, the prevalence of B. ovatus and B. plebeius was increased in those with low genetic risk, while the prevalence of B. vulgatus was higher in those with high genetic risk. The results indicate that both the type of milk feeding and the HLA-DQ genotype influence the colonization process of Bacteroides species, and possibly the disease risk. PMID:21642397

  10. Determination of the variability of both hydrophilic and lipophilic toxins in endemic wild bivalves and carnivorous gastropods from the southern part of Chile.

    PubMed

    Zamorano, Ruben; Marín, Michelle; Cabrera, Fabiola; Figueroa, Diego; Contreras, Cristóbal; Barriga, Andrés; Lagos, Néstor; García, Carlos

    2013-01-01

    The aim of this study was to analyse and determine the composition of paralytic shellfish poisoning (PSP) toxins and lipophilic toxins in the Region of Aysén, Chile, in wild endemic mussels (Mytilus chilensis, Venus antiqua, Aulacomya ater, Choromytilus chorus, Tagelus dombeii and Gari solida) and in two endemic carnivorous molluscs species (Concholepas concholepas and Argobuccinum ranelliforme). PSP-toxin contents were determined by using HPLC with fluorescence detection, while lipophilic toxins were determined by using LC-MS/MS. Mean concentrations for the total of PSP toxins were in the range 55-2505 μg saxitoxin-equivalent/100 g. The two most contaminated samples for PSP toxicity were bivalve Gari solida and carnivorous Argobuccinum ranelliforme with 2505 ± 101 and 1850 ± 137 μg saxitoxin-equivalent/100 g, respectively (p < 0.05). The lipophilic toxins identified were okadaic acid, dinophysistoxin-1 (DTX-1), azaspiracid-1 (AZA-1), pectenotoxin-2 (PTX-2) and yessotoxins (YTX). All analysed molluscs contained lipophilic toxins at levels ranging from 56 ± 4.8 to 156.1 ± 8.2 μg of okadaic acid-equivalent/kg shellfish together with YTX at levels ranging from 1.0 ± 0.1 to 18 ± 0.9 μg of YTX-equivalent/kg shellfish and AZA at levels ranging from 3.6 ± 0.2 to 31 ± 2.1 μg of AZA-equivalent/kg shellfish. Furthermore, different bivalves and gastropods differ in their capacity of retention of lipophilic toxins, as shown by the determination of their respective lipophilic toxins levels. In all the evaluated species, the presence of lipophilic toxins associated with biotransformation in molluscs and carnivorous gastropods was not identified, in contrast to the identification of PSP toxins, where the profiles identified in the different species are directly related to biotransformation processes. Thus, this study provides evidence that the concentration of toxins in the food intake of the evaluated species (Bivalvia and Gastropoda class) determines the degree of

  11. The linked units of 5S rDNA and U1 snDNA of razor shells (Mollusca: Bivalvia: Pharidae).

    PubMed

    Vierna, J; Jensen, K T; Martínez-Lage, A; González-Tizón, A M

    2011-08-01

    The linkage between 5S ribosomal DNA and other multigene families has been detected in many eukaryote lineages, but whether it provides any selective advantage remains unclear. In this work, we report the occurrence of linked units of 5S ribosomal DNA (5S rDNA) and U1 small nuclear DNA (U1 snDNA) in 10 razor shell species (Mollusca: Bivalvia: Pharidae) from four different genera. We obtained several clones containing partial or complete repeats of both multigene families in which both types of genes displayed the same orientation. We provide a comprehensive collection of razor shell 5S rDNA clones, both with linked and nonlinked organisation, and the first bivalve U1 snDNA sequences. We predicted the secondary structures and characterised the upstream and downstream conserved elements, including a region at -25 nucleotides from both 5S rDNA and U1 snDNA transcription start sites. The analysis of 5S rDNA showed that some nontranscribed spacers (NTSs) are more closely related to NTSs from other species (and genera) than to NTSs from the species they were retrieved from, suggesting birth-and-death evolution and ancestral polymorphism. Nucleotide conservation within the functional regions suggests the involvement of purifying selection, unequal crossing-overs and gene conversions. Taking into account this and other studies, we discuss the possible mechanisms by which both multigene families could have become linked in the Pharidae lineage. The reason why 5S rDNA is often found linked to other multigene families seems to be the result of stochastic processes within genomes in which its high copy number is determinant.

  12. The linked units of 5S rDNA and U1 snDNA of razor shells (Mollusca: Bivalvia: Pharidae)

    PubMed Central

    Vierna, J; Jensen, K T; Martínez-Lage, A; González-Tizón, A M

    2011-01-01

    The linkage between 5S ribosomal DNA and other multigene families has been detected in many eukaryote lineages, but whether it provides any selective advantage remains unclear. In this work, we report the occurrence of linked units of 5S ribosomal DNA (5S rDNA) and U1 small nuclear DNA (U1 snDNA) in 10 razor shell species (Mollusca: Bivalvia: Pharidae) from four different genera. We obtained several clones containing partial or complete repeats of both multigene families in which both types of genes displayed the same orientation. We provide a comprehensive collection of razor shell 5S rDNA clones, both with linked and nonlinked organisation, and the first bivalve U1 snDNA sequences. We predicted the secondary structures and characterised the upstream and downstream conserved elements, including a region at −25 nucleotides from both 5S rDNA and U1 snDNA transcription start sites. The analysis of 5S rDNA showed that some nontranscribed spacers (NTSs) are more closely related to NTSs from other species (and genera) than to NTSs from the species they were retrieved from, suggesting birth-and-death evolution and ancestral polymorphism. Nucleotide conservation within the functional regions suggests the involvement of purifying selection, unequal crossing-overs and gene conversions. Taking into account this and other studies, we discuss the possible mechanisms by which both multigene families could have become linked in the Pharidae lineage. The reason why 5S rDNA is often found linked to other multigene families seems to be the result of stochastic processes within genomes in which its high copy number is determinant. PMID:21364693

  13. De Novo Assembly and Characterization of Two Transcriptomes Reveal Multiple Light-Mediated Functions in the Scallop Eye (Bivalvia: Pectinidae)

    PubMed Central

    Pairett, Autum N.; Serb, Jeanne M.

    2013-01-01

    Background The eye has evolved across 13 separate lineages of molluscs. Yet, there have been very few studies examining the molecular machinary underlying eye function of this group, which is due, in part, to a lack of genomic resources. The scallop (Bivalvia: Pectinidae) represents a compeling molluscan model to study photoreception due to its morphologically novel and separately evolved mirror-type eye. We sequenced the adult eye transcriptome of two scallop species to: 1) identify the phototransduction pathway components; 2) identify any additional light detection functions; and 3) test the hypothesis that molluscs possess genes not found in other animal lineages. Results A total of 3,039 contigs from the bay scallop, Argopecten irradians and 26,395 contigs from the sea scallop, Placopecten magellanicus were produced by 454 sequencing. Targeted BLAST searches and functional annotation using Gene Ontology (GO) terms and KEGG pathways identified transcripts from three light detection systems: two phototransduction pathways and the circadian clock, a previously unrecognized function of the scallop eye. By comparing the scallop transcriptomes to molluscan and non-molluscan genomes, we discovered that a large proportion of the transcripts (7,776 sequences) may be specific to the scallop lineage. Nearly one-third of these contain transmembrane protein domains, suggesting these unannotated transcripts may be sensory receptors. Conclusions Our data provide the most comprehensive transcriptomic resource currently available from a single molluscan eye type. Candidate genes potentially involved in sensory reception were identified, and are worthy of further investigation. This resource, combined with recent phylogenetic and genomic data, provides a strong foundation for future investigations of the function and evolution of molluscan photosensory systems in this morphologically and taxonomically diverse phylum. PMID:23922823

  14. A new species of freshwater mussel (Bivalvia: Unionidae), Pleurobema athearni, from the Coosa River Drainage of Alabama, USA

    USGS Publications Warehouse

    Gangloff, M.M.; Williams, J.D.; Feminella, J.W.

    2006-01-01

    The Mobile Basin historically supported one of the most diverse freshwater mussel (Bivalvia: Unionidae) assemblages in North America. More than 65 species of mussels are known from the Basin, but it is difficult to determine how many species were present historically. The drainage's unique physical habitat was largely destroyed between the late 1800s and mid-1900s by impoundment and channel modifications of most of the larger rivers. Many species that were once common are now restricted to small headwater rivers and mid-sized tributaries. Recent Coosa River tributary surveys revealed a new, undescribed species of Pleurobema. This new species, Pleurobema athearni, is distinctive in outward appearance, shell morphometry and reproductive morphology, and can be distinguished from other Coosa River drainage unionids. Our analysis indicates that P. athearni is morphologically different from other similar taxa. It differs both in shell width/length and width/height ratios and thus provides a simple, quantitative means to differentiate this species from P. georgianum (Lea, 1841) Fusconaia barnesiana (Lea, 1838), and F. cerina (Conrad, 1838), which it superficially resembles and that also occur in the area. Our morphological diagnosis of this species is supported by recent molecular analyses that suggest this species is a Pleurobema and one closely related to other endemic Coosa River drainage unionids. The discovery of a new species of large, long-lived macroinvertebrate from a relatively well-sampled drainage in a populated region of the southeast United States underscores the need for more detailed surveys in isolated stretches of tributary streams. It should also serve as a reminder that almost 40 species of aquatic mollusks have been extirpated from the Mobile Basin before anything could be learned about their habitat or life history requirements. Copyright ?? 2006 Magnolia Press.

  15. Predation scars may influence host susceptibility to pathogens: evaluating the role of corallivores as vectors of coral disease.

    PubMed

    Nicolet, K J; Chong-Seng, K M; Pratchett, M S; Willis, B L; Hoogenboom, M O

    2018-03-27

    Infectious diseases not regulated by host density, such as vector-borne diseases, have the potential to drive population declines and extinctions. Here we test the vector potential of the snail Drupella sp. and butterflyfish Chaetodon plebeius for two coral diseases, black band (BBD) and brown band (BrB) disease. Drupella transmitted BrB to healthy corals in 40% of cases immediately following feeding on infected corals, and even in 12% of cases 12 and 24 hours following feeding. However, Drupella was unable to transmit BBD in either transmission treatment. In a field experiment testing the vector potential of naturally-occurring fish assemblages, equivalent numbers of caged and uncaged coral fragments became infected with either BrB, BBD or skeletal eroding band, indicating that corallivorous fish were unlikely to have caused transmission. In aquaria, C. plebeius did not transmit either BBD or BrB, even following extended feeding on both infected and healthy nubbins. A literature review confirmed only four known coral disease vectors, all invertebrates, corroborating our conclusion that polyp-feeding fishes are unlikely to be vectors of coral diseases. This potentially because polyp-feeding fishes produce shallow lesions, not allowing pathogens to invade coral tissues. In contrast, corallivorous invertebrates that create deeper feeding scars increase pathogens transmission.

  16. Disturbance of Shallow Marine Soft-Bottom Environments and Megabenthos Assemblages by a Huge Tsunami Induced by the 2011 M9.0 Tohoku-Oki Earthquake

    PubMed Central

    Seike, Koji; Shirai, Kotaro; Kogure, Yukihisa

    2013-01-01

    Huge tsunami waves associated with megathrust earthquakes have a severe impact on shallow marine ecosystems. We investigated the impact of a tsunami generated by the 2011 M9.0 Tohoku-Oki earthquake on the seafloor and large benthic animals in muddy and sandy ria coasts (Otsuchi and Funakoshi bays) in northeastern Japan. We conducted underwater field surveys using scuba equipment in water depths of <20 m before the tsunami (September 2010) and after the tsunami (September 2011 and September 2012). During the study period, episodic changes in topography and grain-size composition occurred on the seafloor of the study area. Megabenthos sampling revealed a distinct pattern of distribution succession for each benthic species. For example, the protobranch bivalve Yoldia notabilis (Bivalvia: Nuculanidae) and the heterodont bivalve Felaniella usta (Bivalvia: Ungulinidae) disappeared after the tsunami event, whereas the distribution of the venus clam Gomphina melanaegis (Bivalvia: Veneridae) remained unchanged. In addition, the patterns of succession for a single species, such as the giant button top shell Umbonium costatum (Gastropoda: Trochidae) and the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), varied between the two bays studied. Our data also show that reestablishment of some benthic animal populations began within 18 months of the tsunami disturbance. PMID:23762365

  17. Disturbance of shallow marine soft-bottom environments and megabenthos assemblages by a huge tsunami induced by the 2011 M9.0 Tohoku-Oki earthquake.

    PubMed

    Seike, Koji; Shirai, Kotaro; Kogure, Yukihisa

    2013-01-01

    Huge tsunami waves associated with megathrust earthquakes have a severe impact on shallow marine ecosystems. We investigated the impact of a tsunami generated by the 2011 M9.0 Tohoku-Oki earthquake on the seafloor and large benthic animals in muddy and sandy ria coasts (Otsuchi and Funakoshi bays) in northeastern Japan. We conducted underwater field surveys using scuba equipment in water depths of <20 m before the tsunami (September 2010) and after the tsunami (September 2011 and September 2012). During the study period, episodic changes in topography and grain-size composition occurred on the seafloor of the study area. Megabenthos sampling revealed a distinct pattern of distribution succession for each benthic species. For example, the protobranch bivalve Yoldia notabilis (Bivalvia: Nuculanidae) and the heterodont bivalve Felaniella usta (Bivalvia: Ungulinidae) disappeared after the tsunami event, whereas the distribution of the venus clam Gomphina melanaegis (Bivalvia: Veneridae) remained unchanged. In addition, the patterns of succession for a single species, such as the giant button top shell Umbonium costatum (Gastropoda: Trochidae) and the heart urchin Echinocardium cordatum (Echinoidea: Loveniidae), varied between the two bays studied. Our data also show that reestablishment of some benthic animal populations began within 18 months of the tsunami disturbance.

  18. Predicting the effects of climate change on population connectivity and genetic diversity of an imperiled freshwater mussel, Cumberlandia monodonta (Bivalvia: Margaritiferidae), in riverine systems.

    PubMed

    Inoue, Kentaro; Berg, David J

    2017-01-01

    In the face of global climate change, organisms may respond to temperature increases by shifting their ranges poleward or to higher altitudes. However, the direction of range shifts in riverine systems is less clear. Because rivers are dendritic networks, there is only one dispersal route from any given location to another. Thus, range shifts are only possible if branches are connected by suitable habitat, and stream-dwelling organisms can disperse through these branches. We used Cumberlandia monodonta (Bivalvia: Unionoida: Margaritiferidae) as a model species to investigate the effects of climate change on population connectivity because a majority of contemporary populations are panmictic. We combined ecological niche models (ENMs) with population genetic simulations to investigate the effects of climate change on population connectivity and genetic diversity of C. monodonta. The ENMs were constructed using bioclimatic and landscape data to project shifts in suitable habitat under future climate scenarios. We then used forward-time simulations to project potential changes in genetic diversity and population connectivity based on these range shifts. ENM results under current conditions indicated long stretches of highly suitable habitat in rivers where C. monodonta persists; populations in the upper Mississippi River remain connected by suitable habitat that does not impede gene flow. Future climate scenarios projected northward and headwater-ward range contraction and drastic declines in habitat suitability for most extant populations throughout the Mississippi River Basin. Simulations indicated that climate change would greatly reduce genetic diversity and connectivity across populations. Results suggest that a single, large population of C. monodonta will become further fragmented into smaller populations, each of which will be isolated and begin to differentiate genetically. Because C. monodonta is a widely distributed species and purely aquatic, our

  19. Mortality through ontogeny of soft-bottom marine invertebrates with planktonic larvae

    NASA Astrophysics Data System (ADS)

    Pedersen, Troels Møller; Hansen, Jørgen L. S.; Josefson, Alf B.; Hansen, Benni W.

    2008-09-01

    The present survey covers one spawning season of marine benthic invertebrates in a large geographical area, the inner Danish waters, and includes a wide range of habitats with steep salinity and nutrient load gradients. The loss ratios of soft-bottom marine invertebrates from one development stage to the next is calculated based on average abundances of pelagic larvae, benthic post-larvae and adults of Bivalvia, Gastropoda, Polychaeta and Echinodermata, with planktonic development. This gives a rough estimate of the larval and post-larval mortality. Loss ratios between post-larvae stage and adult stage (post-larval mortality) varies from 3:1 to 7:1 (71.2-84.9%) and loss ratios between larvae and post-larvae (larval mortality) and between larvae and adult, ranging from 7:1 to 42:1 (85.2-97.6%) and from 45:1 to 210:1 (97.8-99.5%), respectively. The results show a remarkable unity in loss ratios (mortality) between the mollusc taxa (Bivalvia and Gastropoda) at the phylum/class level. This similarity in loss ratios among the mollusc taxa exhibiting the same developmental pathways suggests that the mortality is governed by the same biotic and abiotic factors. Larval mortality is estimated to range from 0.10 d - 1 to 0.32 d - 1 for Bivalvia and ranging from 0.09 d - 1 to 0.23 d - 1 for Polychaeta. The species loss ratios combined with specific knowledge of the reproduction cycles give estimated loss ratios (mortality) between the post-larvae and the adult stage of 25:1 and 14:1 for the bivalves Abra spp. and Mysella bidentata. For the polychaete Pygospio elegans the loss ratio (larval mortality) between the larvae and the post-larval stage is 154:1 and between the post-larvae and the adult stage 41:1. For Pholoe inornata the loss ratio between post-larvae and adults is 7:1. The present results confirm that the larval stage, metamorphosis and settlement are the critical phase in terms of mortality in the life cycle for Bivalvia. Assuming steady state based on actual

  20. THREE YEAR VARIATION IN SHELL GROWTH OF THEMUSSEL, ELLIPTIO WACCAMAWENSIS (LEA), IN LAKEWACCAMAW, A BAY LAKE IN NORTH CAROLINA

    EPA Science Inventory

    Freshwater mussels (Bivalvia: Unionidae) are one of the most endangered animal taxa in North America, and continued research on unionids will improve management decisions regarding their conservation. One unexplored aspect of unionid ecology is the magnitude of interannual variat...

  1. EXPERIMENTAL STUDIES OF INTERACTIONS BETWEEN TWO UNIONIDS, ELLIPTIO WACCAMAWENSIS AND LEPTODEA OCHRACEA: VARIATION IN NEGATIVE AND POSITIVE EFFECTS

    EPA Science Inventory

    Historical records indicate dense and diverse assemblages of unionid mussels (Bivalvia: Unionidae) in a variety of aquatic communities, but the potential structuring role of competitive interactions among these organisms has not been adequately examined. We report here the result...

  2. The complete sequences and gene organisation of the mitochondrial genomes of the heterodont bivalves Acanthocardia tuberculata and Hiatella arctica – and the first record for a putative Atpase subunit 8 gene in marine bivalves

    PubMed Central

    Dreyer, Hermann; Steiner, Gerhard

    2006-01-01

    Background Mitochondrial (mt) gene arrangement is highly variable among molluscs and especially among bivalves. Of the 30 complete molluscan mt-genomes published to date, only one is of a heterodont bivalve, although this is the most diverse taxon in terms of species numbers. We determined the complete sequence of the mitochondrial genomes of Acanthocardia tuberculata and Hiatella arctica, (Mollusca, Bivalvia, Heterodonta) and describe their gene contents and genome organisations to assess the variability of these features among the Bivalvia and their value for phylogenetic inference. Results The size of the mt-genome in Acanthocardia tuberculata is 16.104 basepairs (bp), and in Hiatella arctica 18.244 bp. The Acanthocardia mt-genome contains 12 of the typical protein coding genes, lacking the Atpase subunit 8 (atp8) gene, as all published marine bivalves. In contrast, a complete atp8 gene is present in Hiatella arctica. In addition, we found a putative truncated atp8 gene when re-annotating the mt-genome of Venerupis philippinarum. Both mt-genomes reported here encode all genes on the same strand and have an additional trnM. In Acanthocardia several large non-coding regions are present. One of these contains 3.5 nearly identical copies of a 167 bp motive. In Hiatella, the 3' end of the NADH dehydrogenase subunit (nad)6 gene is duplicated together with the adjacent non-coding region. The gene arrangement of Hiatella is markedly different from all other known molluscan mt-genomes, that of Acanthocardia shows few identities with the Venerupis philippinarum. Phylogenetic analyses on amino acid and nucleotide levels robustly support the Heterodonta and the sister group relationship of Acanthocardia and Venerupis. Monophyletic Bivalvia are resolved only by a Bayesian inference of the nucleotide data set. In all other analyses the two unionid species, being to only ones with genes located on both strands, do not group with the remaining bivalves. Conclusion The two mt

  3. [Latin American malacology. Freshwater mollusks from Argentina].

    PubMed

    Rumi, Alejandra; Gregoric, Diego E Gutiérrez; Núñez, Verónica; Darrigran, Gustavo A

    2008-03-01

    A report and an updated list with comments on the species of freshwater molluscs of Argentina which covers an area of 2 777 815 km2 is presented. Distributions of Gastropoda and Bivalvia families, endemic, exotic, invasive as well as entities of sanitary importance are also studied and recommendations on their conservation are provided. Molluscs related to the Del Plata Basin have been thoroughly studied in comparison to others areas of the country. This fauna exhibits relatively the biggest specific richness and keeps its affinity with the fauna of other regions of the basin in areas of Paraguay and Brasil. The 4 500 records of molluscs considered in this paper arise from the study of the collections of Museo Argentino de Ciencias Naturales "Bernardino Rivadavia", Buenos Aires; Museo de La Plata, La Plata and Fundación "Miguel Lillo", Tucumán. These institutions keep very important collections of molluscs in southern South America. Field information has recently been obtained and localities cited by other authors are also included in the data base. Until today, 166 species have been described, 101 belonging to 10 families of Gastropoda and 65 to 7 of Bivalvia. Families with highest specific richness are Lithoglyphidae (22) and Sphaeriidae (25), respectively. The number of endemic species (those present only in Argentina) by family is: Gastropoda: Ampullariidae (1), Cochliopidae (10), Lithoglyphidae (11), Thiariidae (3), Chilinidae (11), Lymnaeidae (2) and Physidae (2?); Bivalvia: Hyriidae (1?); Etheriidae (1?) and Sphaeriidae (10). Families with a distribution that comprise almost the whole country are: the Sphaeriidae and the gastropods Cochliopidae, Chilinidae and Lymnaeidae. Families Erodonidae and Solecurtidae (Bivalvia) were registered in mixohaline environments from Buenos Aires province. Gastropod families Thiaridae and Glacidorbiidae show a very restricted distribution. The rest of the families are present mainly in the center and north of the country

  4. Mantle displays of freshwater mussels elicit attacks from fish

    Treesearch

    Wendell R. Haag; Melvin L. Warren

    1999-01-01

    Gravid females of some North American freshwater mussel species (Bivalvia: Unionidae) display highly modified mantle margins and other reproductive structures which mimic small fish, terrestrial insects, or aquatic macro-invertebrates. The authors report the responses of fish to these lures, based on the results of laboratory encounters between the following pairs of...

  5. Risk of Pore Water Hydrogen Sulfide Toxicity in Dredged Material Bioassays

    DTIC Science & Technology

    1995-11-01

    Prog. Ser. 101, 147-155. Moore, D. W., and Dillon, T. M. (1993). “Chronic sublethal effects of San Francisco Bay sediments on Neris (Neanthes...metabolism of Arctica isfandica L. (Bivalvia),” J. Exp. Mar. Biol. Ecol. 170, 213-226. Oritz, J. A., Rueda, A., Carbonell, G., Camargo , J. A., Nieto, F

  6. Ecology of Buzzards Bay: An Estuarine Profile

    DTIC Science & Technology

    1996-09-01

    bucera Polychaeta Ascophyllum nodosum Phaeophyta Tellina tenera Bivalvia Fucus vesiculosus Phaeophyta Ninoe nigripes Polychaeata Chondrus crispus...Because the current and future environmental health of these types of embayments can be directly influenced by activities within contributing watersheds...restricted coastal embayments, while natural and anthropogenic influences responsible for present and future changes to bay systems are the focus of Chap

  7. Structure of a glycoside hydrolase family 50 enzyme from a subfamily that is enriched in human gut microbiome bacteroidetes.

    PubMed

    Giles, Kaleigh; Pluvinage, Benjamin; Boraston, Alisdair B

    2017-01-01

    The polysaccharide utilization locus in Bacteroides plebeius that confers the ability to catabolize porphyran contains a putative GH50 β-agarase (BACPLE_01683, BpGH50). BpGH50 did not show any clear activity on agarose or on the related algal galactans porphyran and carrageenan. However, the 1.4 Å resolution X-ray crystal structure of BpGH50 confirmed its possession of the core (α/β) 8 barrel fold found in GH50 enzymes as well as the structural conservation of the catalytic residues and some substrate binding residues. Examination of the structure supports assignment of this protein as a β-galactosidase but suggests that it may utilize a different, possibly hybrid, algal galactan substrate. Proteins 2016; 85:182-187. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  8. The Calyptogena magnifica chemoautotrophic symbiont genome

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Newton, I.L.; Woyke, T.; Auchtung, T.A.

    2007-03-01

    Chemoautotrophic endosymbionts are the metabolic cornerstone of hydrothermal vent communities, providing invertebrate hosts with nearly all of their nutrition. The Calyptogena magnifica (Bivalvia: Vesicomyidae) symbiont, Candidatus Ruthia magnifica, is the first intracellular sulfur-oxidizing endosymbiont to have its genome sequenced, revealing a suite of metabolic capabilities. The genome encodes major chemoautotrophic pathways as well as pathways for biosynthesis of vitamins, cofactors, and all 20 amino acids required by the clam.

  9. Complete mitochondrial genome of Platevindex sp. (Gastropoda: Pulmonata: Systellommatophora: Onchidiidae).

    PubMed

    Liu, Chen; Shen, He Ding; Zhou, Na

    2016-01-01

    The complete mitochondrial genome sequence of Platevindex sp. is firstly described in the article. The mitogenome (13,908 bp) contains 22 tRNA genes, 2 ribosomal RNA genes and 13 protein-coding genes, and 1 putative control region (CR). CR is not well characterized due to lack of discrete conserved sequence blocks. This characteristic is similar with CRs of other invertebrate mitochondrial genomes. The characteristic is the typical bivalvia mitochondrial gene composition.

  10. Indirect Evidence on Sex Reversal of Sinonovacula constricta (Bivalvia: Euheterodonta) and Gomphina veneriformis (Bivalvia: Veneridae)

    PubMed Central

    Shin, Yun Kyung; Park, Jung Jun; Choi, Ji Sung; Lee, Jung Sick

    2014-01-01

    This study attempts to propose the possibility of the sex reversal in Sinonovacula constricta and Gomphina veneriformis by confirming the changes in the sex ratio with the shell length in the same population level. For analysis of sex ratio, 100 individuals of S. constricta (SL 26.5-95.0 mm) and 2385 individuals of G. veneriformis (SL 15.1-60.1 mm) were used. Sex was analyzed histologically. Both species displayed the tendency of increase in the female proportion with increase in shell length. In this study, changes in the sex ratio in accordance with the growth of S. constricta and G. veneriformis are determined to be indirect evidence that signifies their sex reversal. PMID:25949174

  11. Estuarine Habitat Assessment for Construction of a Submarine Transmission Line

    NASA Astrophysics Data System (ADS)

    Hamouda, Amr Z.; Abdel-Salam, Khaled M.

    2010-07-01

    The present paper describes a submarine survey using the acoustic discrimination system QTC VIEW (Series V) as an exploratory tool to adjust final route alignment of a new pipeline. By using acoustic sound survey as an exploratory tool described in this paper to adjust final route alignment of a new pipeline to minimize the environmental impact caused and ultimately to avoid any mitigation measures. The transmission pipeline extended from the shore line of Abu-Qir Bay, on the Mediterranean Sea in Egypt, out to 70 nautical miles at sea (60 m water depth). Four main surface sediment types were defined in the study area, namely fine sand, silty sand, silt and clay. Results of the acoustic classification revealed four acoustic classes. The first acoustic class corresponded to fine sand, absence of shell debris and very poor habitats characteristics. The second acoustic class is predominant in the study area and corresponds to the region occupied by silt. It is also characterized by intermediate diversity of macrobenthic invertebrate community which is mainly characterized by polychaeta. The third acoustic class is characterized by silt to silty clay. It is characterized by a high diversity of macrobenthic invertebrate community which is mainly polychaeta with an intermediate diversity of gastropoda and bivalvia. The final acoustic class is characterized by clay and high occurrence of shell debris of gastropoda, bivalvia and polychaeta.

  12. "Recent" macrofossil remains from the Lomonosov Ridge, central Arctic Ocean

    NASA Astrophysics Data System (ADS)

    Le Duc, Cynthia; de Vernal, Anne; Archambault, Philippe; Brice, Camille; Roberge, Philippe

    2016-04-01

    The examination of surface sediment samples collected from 17 sites along the Lomonosov Ridge at water depths ranging from 737 to 3339 meters during Polarstern Expedition PS87 in 2014 (Stein, 2015), indicates a rich biogenic content almost exclusively dominated by calcareous remains. Amongst biogenic remains, microfossils (planktic and benthic foraminifers, pteropods, ostracods, etc.) dominate but millimetric to centrimetric macrofossils occurred frequently at the surface of the sediment. The macrofossil remains consist of a large variety of taxa, including gastropods, bivalvia, polychaete tubes, scaphopods, echinoderm plates and spines, and fish otoliths. Among the Bivalvia, the most abundant taxa are Portlandia arctica, Hyalopecten frigidus, Cuspidaria glacilis, Policordia densicostata, Bathyarca spp., and Yoldiella spp. Whereas a few specimens are well preserved and apparently pristine, most mollusk shells displayed extensive alteration features. Moreover, most shells were covered by millimeter scale tubes of the serpulid polychaete Spirorbis sp. suggesting transport from low intertidal or subtidal zone. Both the ecological affinity and known geographic distribution of identified bivalvia as named above support the hypothesis of transportation rather than local development. In addition to mollusk shells, more than a hundred fish otoliths were recovered in surface sediments. The otoliths mostly belong to the Gadidae family. Most of them are well preserved and without serpulid tubes attached to their surface, suggesting a local/regional origin, unlike the shell remains. Although recovered at the surface, the macrofaunal assemblages of the Lomonosov Ridge do not necessarily represent the "modern" environments as they may result from reworking and because their occurrence at the surface of the sediment may also be due to winnowing of finer particles. Although the shells were not dated, we suspect that their actual ages may range from modern to several thousands of

  13. Depositional environment, foraminifer content and ESR ages of Quaternary Gediz Delta Sediments (Eastern Aegean Sea, İzmir-Western Turkey)

    NASA Astrophysics Data System (ADS)

    Gökçe Benli, Ekin; Aydın, Hülya; İşintek, İsmail; Engin, Birol; Şengöçmen, Berna

    2016-04-01

    Sediments and fossil content of Gediz Delta (Eastern Aegean Sea - İzmir) were examined based on the drilling core samples of the YSK-C and SK-246 drilling. W-SW part of the Delta is represented by continental delta sediments up to 6 meters and shallow marine detritic sediments up to 35 meters in the YSK-C drilling. Continental part consists of an soiled, graveled, muddy and sandy sediment in terms of rich organic substance. As for marine part, it consists of bioclast, muddy, fine graveled sand and by repetition of pebble, sand and bioclast bearing mud layers. Bioclasts comprise of bivalvia, echinoid, ostracod, gastropod, foramifer and bryozoa fragments. Benthic foraminiferal fauna determinated in the marine levels are represented by 55 bethic, 2 planktonic species. These foraminifers and bioclasts reflect that the W-SW part of the delta, has been occured in marine conditions between 8-31m deep. E-NE part of the delta is generally represented by continental sediments up to 43.5m in SK-246 drilling. In addition, it includes marine levels in 18-19 m, 23-24 m and 36-37,5 m intervals. Continental sediments of E-NE part is generally represented by calcareous and sandy mud rocks which mostly includes ash, tuff, and pebble derived from Neogene volcanic rocks. As for marine levels, it is composed of calcareous mud stones and calcareous clay stones including very thin gastropod, bivalvia and ostracod in 18- 19 and 36-37.5 meters whereas it is represented by sandy mud stones including a great deal of bentic foraminifer, bivalvia, bryozoa, echinoid, gastropod in 23-24 metres. Thus show that E-NE part of the delta is usually in continental condition but it is occasionally covered by sea. In aging studies of YSK-C core done by ESR method, age of 8-9 m interval is determined to be 11. 376 ± 0,067 Ka; however ages of 10-11m and 24-25 m intervals are revealed to be 16.466 ± 0,016 Ka and 15.344 ± 0,021 Ka respectively; finally age of 25-26 m interval is found to be 19.995 ± 0

  14. Estimation of mercury background values in sediment and biota of the Bijagós archipelago, Guinea-Bissau.

    PubMed

    Coelho, J P; Monteiro, R J R; Catry, T; Lourenço, P M; Catry, P; Regalla, A; Catry, I; Figueira, P; Pereira, E; Vale, C; P Granadeiro, José

    2016-10-15

    This work evaluates the mercury (Hg) contamination status (sediments and biota) of the Bijagós archipelago, off the coast of Guinea-Bissau. Sediments exhibited very low concentrations (<1-12ngg(-1)), pointing to negligible sources of anthropogenic Hg in the region. Nevertheless, Hg is well correlated to the fine fraction, aluminium, and loss on ignition, indicating the effect of grain size and organic matter content on the presence of Hg in sediments. Mercury in the bivalves Tagelus adansoni and Senilia senilis did not vary considerably among sites, ranging within narrow intervals (0.09-0.12 and 0.12-0.14μgg(-1) (dry weight), respectively). Divergent substrate preferences/feeding tactics may justify slight differences between species. The value 11ngg(-1) is proposed as the sediment background concentration for this West-African coastal region, and concentrations within the interval 8-10ngg(-1) (wet weight) may be considered as reference range for S. senilis and T. adansoni in future monitoring studies. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Sublethal foot-predation on Donacidae (Mollusca: Bivalvia)

    NASA Astrophysics Data System (ADS)

    Salas, Carmen; Tirado, Cristina; Manjón-Cabeza, Maria Eugenia

    2001-08-01

    The incidence of foot nipping was studied on the Donax spp. of the littoral of Málaga (Southern Spain, 2875 specimens collected from February 1990 to January 1991) and of Ré island (French Atlantic coast, 262 specimens of Donax vittatus (Da Costa, 1778) collected in May 1996). In Málaga, Donax trunculus L., 1758 was the species most regularly nipped (18% of individuals), with peaks in summer (25% in August and 48% in September) and winter (34% in December). In Ré island, 27% of the specimens showed a nipped foot. Logistic regression shows that in D. trunculus length is the variable that most influences the probability of foot nipping, followed by weight and chlorophyll a. However, the difference in length between damaged and undamaged individuals was not significant (U-Mann-Whitney test). The size class frequency and the values of Ivlev's index show that the small size classes were avoided, while for the other size classes predation remained balanced throughout the year. Therefore, the avoidance of the small size classes makes length the most influential variable. The logistic regression indicated a coefficient B=-0.03 for weight. This implies a slightly negative influence on the probability of foot nipping. However, without the data of September, there is a positive correlation ( r=0.76, p<0.01) between the monthly percentages of predation and the flesh dry weight of a standard individual (25 mm long). The peak in September could be due to the recruitment peak of bivalves, which may have attracted more predators to the area, and/or to the recruitment of predators such as crabs to the swash zone. Logistic regression and test of comparison of percentages indicate that there was not any influence of the sex of an animal on the probability of foot nipping. Only in February was a significantly higher percentage ( p<0.05) of females nipped (44.44%) than the total of females in the sample (20.20%). The biomass (as flesh dry weight) of D. trunculus lost by foot nipping amounts to more than 20% in most of the size classes. There was an increase from the small sizes to the largest ones, in which it reaches 37%, with a positive correlation ( r=0.84; p<0.005) between size class and loss of biomass. Possible predators responsible for the foot nipping are crabs. Crab species usually found together with the donacids were Portumnus latipes (Pennant, 1777) Liocarcinus vernalis (Risso, 1816) and Atelecyclus undecimdentatus (Herbst, 1783). In aquarium experiments, they demonstrated an ability to nip the foot of clams. Portumnus latipes was the most active foot nipper, but left alive all the damaged clams. Therefore, we conclude that crabs are the most likely foot-nipping predators in the field.

  16. Tide-associated biological rhythms of some White Sea littoral invertebrates.

    PubMed

    Gusev, O A; Golubev, A I

    2001-01-01

    We report the results from two years of laboratory observations of the tide-associated rhythms of activity of White Sea intertidal invertebrates, Mya arenaria (Bivalvia) and Gammarus finmarchicus (Amphipoda). The tidal associated activity of these invertebrates could not be estimate as a clear circatidal clock. Gammarus activity could be phase shifted by a 0.5 h exposure to turbulent water twice a day for 2-3 days. Mya's rhythm could be changed by a single drainage of aquariums lasting about 15 min. This kind of timing system may be a relatively primitive evolution feature. c2001 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

  17. Phylogenetic position of the genus Perkinsus (Protista, Apicomplexa) based on small subunit ribosomal RNA.

    PubMed

    Goggin, C L; Barker, S C

    1993-07-01

    Parasites of the genus Perkinsus destroy marine molluscs worldwide. Their phylogenetic position within the kingdom Protista is controversial. Nucleotide sequence data (1792 bp) from the small subunit rRNA gene of Perkinsus sp. from Anadara trapezia (Mollusca: Bivalvia) from Moreton Bay, Queensland, was used to examine the phylogenetic affinities of this enigmatic genus. These data were aligned with nucleotide sequences from 6 apicomplexans, 3 ciliates, 3 flagellates, a dinoflagellate, 3 fungi, maize and human. Phylogenetic trees were constructed after analysis with maximum parsimony and distance matrix methods. Our analyses indicate that Perkinsus is phylogenetically closer to dinoflagellates and to coccidean and piroplasm apicomplexans than to fungi or flagellates.

  18. Complete mitochondrial genome of Ostrea denselamellosa (Bivalvia, Ostreidae).

    PubMed

    Yu, Hong; Kong, Lingfeng; Li, Qi

    2016-01-01

    The complete mitochondrial (mt) genome of the flat oyster, Ostrea denselamellosa, was determined using Long-PCR and genome walking techniques in this study. The total length of the mt genome sequence of O. denselamellosa was 16,227 bp, which is the smallest reported Ostreidae mt genome to date. It contained 12 protein-coding genes (lacking of ATP8), 23 transfer RNA genes, and two ribosomal RNA genes. A bias towards a higher representation of nucleotides A and T (60.7%) was detected in the mt genome of O. denselamellosa. The rrnL was split into two fragments (3' half, 711 bp; 5' half, 509 bp), which seems to be the unique characteristics of Ostreidae mt genomes.

  19. Fine structure of Mytella falcata (Bivalvia) gill filaments.

    PubMed

    de Oliveira David, José Augusto; Salaroli, Renato B; Fontanetti, Carmem S

    2008-01-01

    Bivalve filter feeders are sessile animals that live in constant contact with water and its pollutants. Their gill is an organ highly exposed to these conditions due to its large surface and its involvement in gas exchanges and feeding. The bivalve Mytella falcata is found in estuaries of Latin America, on the Atlantic as well as the Pacific Coast. It is commonly consumed, and sometimes is the only source of protein of low-income communities. In this study, gill filaments of M. falcata were characterized using histology, histochemistry and transmission electron microscopy for future comparative studies among animals exposed to environmental pollutants. Gill filaments may be divided into abfrontal, intermediate and frontal zones. Filaments are interconnected by ciliary discs. In the center of filaments, haemocytes circulate through a haemolymph vessel internally lined by an endothelium and supported by an acellular connective tissue rich in polysaccharides and collagen. The abfrontal zone contains cuboidal cells, while the intermediate zone consists of a simple squamous epithelium. The frontal zone is composed of five columnar cell types: one absorptive, mainly characterized by the presence of pinocytic vesicles in the apical region of the cell; one secretory, rarely observed; and three ciliated with abundant mitochondria. All cells lining the filament exhibit numerous microvilli and seem to absorb substances from the environment. PAS staining was observed in mucous cells in the frontal and abfrontal zones. Bromophenol blue allowed the distinction of haemocytes and detection of a glycoprotein secretion in the secretory cells of the frontal region. The characteristics of M. falcata gill filaments observed in this study were very similar to those of other bivalves, especially other Mytilidae, and are suitable for histopathological studies on the effect of water-soluble pollutants.

  20. Composition of gut microbiota in obese and normal-weight Mexican school-age children and its association with metabolic traits.

    PubMed

    López-Contreras, B E; Morán-Ramos, S; Villarruel-Vázquez, R; Macías-Kauffer, L; Villamil-Ramírez, H; León-Mimila, P; Vega-Badillo, J; Sánchez-Muñoz, F; Llanos-Moreno, L E; Canizalez-Román, A; Del Río-Navarro, B; Ibarra-González, I; Vela-Amieva, M; Villarreal-Molina, T; Ochoa-Leyva, A; Aguilar-Salinas, C A; Canizales-Quinteros, S

    2018-06-01

    Childhood obesity is a serious public health problem in Mexico. Adult gut microbiota composition has been linked to obesity, but few studies have addressed the role of gut microbiota in childhood obesity. The aim of this study is to compare gut microbiota composition in obese and normal-weight children and to associate gut microbiota profiles with amino acid serum levels and obesity-related metabolic traits. Microbial taxa relative abundance was determined by 16S rRNA sequencing in 67 normal-weight and 71 obese children aged 6-12 years. Serum amino acid levels were measured by mass spectrometry. Associations between microbiota composition, metabolic parameters and amino acid serum levels were tested. No significant differences in phyla abundances or Firmicutes/Bacteroidetes ratios were observed between normal-weight and obese children. However, Bacteroides eggerthii abundance was significantly higher in obese children and correlated positively with body fat percentage and negatively with insoluble fibre intake. Additionally, Bacteroides plebeius and unclassified Christensenellaceae abundances were significantly higher in normal-weight children. Abundance of both these species correlated negatively with phenylalanine serum levels, a metabolite also found to be associated with obesity in Mexican children. The study identified bacterial species associated with obesity, metabolic complications and amino acid serum levels in Mexican children. © 2017 World Obesity Federation.

  1. Analysis of Keystone Enzyme in Agar Hydrolysis Provides Insight into the Degradation (of a Polysaccharide from) Red Seaweeds*

    PubMed Central

    Hehemann, Jan-Hendrik; Smyth, Leo; Yadav, Anuj; Vocadlo, David J.; Boraston, Alisdair B.

    2012-01-01

    Agars are abundant polysaccharides from marine red algae, and their chemical structure consists of alternating d-galactose and 3,6-anhydro-l-galactose residues, the latter of which are presumed to make the polymer recalcitrant to degradation by most terrestrial bacteria. Here we study a family 117 glycoside hydrolase (BpGH117) encoded within a recently discovered locus from the human gut bacterium Bacteroides plebeius. Consistent with this locus being involved in agarocolloid degradation, we show that BpGH117 is an exo-acting 3,6-anhydro-α-(1,3)-l-galactosidase that removes the 3,6-anhydrogalactose from the non-reducing end of neoagaro-oligosaccharides. A Michaelis complex of BpGH117 with neoagarobiose reveals the distortion of the constrained 3,6-anhydro-l-galactose into a conformation that favors catalysis. Furthermore, this complex, supported by analysis of site-directed mutants, provides evidence for an organization of the active site and positioning of the catalytic residues that are consistent with an inverting mechanism of catalysis and suggests that a histidine residue acts as the general acid. This latter feature differs from the vast majority of glycoside hydrolases, which use a carboxylic acid, highlighting the alternative strategies that enzymes may utilize in catalyzing the cleavage of glycosidic bonds. PMID:22393053

  2. Ultrastrukturelle Untersuchungen zur Morphologie und Genese der Spermien von Archaeogastropoda

    NASA Astrophysics Data System (ADS)

    Kohnert, R.; Storch, V.

    1983-03-01

    The sperm cells of Patella coerulea (Patellacea), Monodonta turbinata, and Gibbula tumida (Trochacea) were investigated by means of transmission electron microscopy. They belong to the primitive type (sensu Franzén) and have more features in common with primitive Bivalvia sperms than with Neritacea. Their head contains an apical acrosome and a roundish nucleus followed by 4 or 5 mitochondria and a centriolar apparatus which consists of two centrioles, one of which bears a flagellum. The sperm cells of Monodonta and Gibbula are very similar to each other and differ mainly in size; Patella exhibits more differences (very small acrosome, subacrosomal space, variable number of spherical mitochondria (origin of spermic dimorphism ?). The development of the sperm cells shows no peculiarities.

  3. A family-level Tree of Life for bivalves based on a Sanger-sequencing approach.

    PubMed

    Combosch, David J; Collins, Timothy M; Glover, Emily A; Graf, Daniel L; Harper, Elizabeth M; Healy, John M; Kawauchi, Gisele Y; Lemer, Sarah; McIntyre, Erin; Strong, Ellen E; Taylor, John D; Zardus, John D; Mikkelsen, Paula M; Giribet, Gonzalo; Bieler, Rüdiger

    2017-02-01

    The systematics of the molluscan class Bivalvia are explored using a 5-gene Sanger-based approach including the largest taxon sampling to date, encompassing 219 ingroup species spanning 93 (or 82%) of the 113 currently accepted bivalve families. This study was designed to populate the bivalve Tree of Life at the family level and to place many genera into a clear phylogenetic context, but also pointing to several major clades where taxonomic work is sorely needed. Despite not recovering monophyly of Bivalvia or Protobranchia-as in most previous Sanger-based approaches to bivalve phylogeny-our study provides increased resolution in many higher-level clades, and supports the monophyly of Autobranchia, Pteriomorphia, Heteroconchia, Palaeoheterodonta, Heterodonta, Archiheterodonta, Euheterodonta, Anomalodesmata, Imparidentia, and Neoheterodontei, in addition to many other lower clades. However, deep nodes within some of these clades, especially Pteriomorphia and Imparidentia, could not be resolved with confidence. In addition, many families are not supported, and several are supported as non-monophyletic, including Malletiidae, Nuculanidae, Yoldiidae, Malleidae, Pteriidae, Arcidae, Propeamussiidae, Iridinidae, Carditidae, Myochamidae, Lyonsiidae, Pandoridae, Montacutidae, Galeommatidae, Tellinidae, Semelidae, Psammobiidae, Donacidae, Mactridae, and Cyrenidae; Veneridae is paraphyletic with respect to Chamidae, although this result appears to be an artifact. The denser sampling however allowed testing specific placement of species, showing, for example, that the unusual Australian Plebidonax deltoides is not a member of Donacidae and instead nests within Psammobiidae, suggesting that major revision of Tellinoidea may be required. We also showed that Cleidothaerus is sister group to the cementing member of Myochamidae, suggesting that Cleidothaeridae may not be a valid family and that cementation in Cleidothaerus and Myochama may have had a single origin. These results

  4. Long-term exposure of several marine benthic animals to static magnetic fields.

    PubMed

    Bochert, R; Zettler, M L

    2004-10-01

    Electrical currents in underwater sea cables could induce magnetic fields. The sea cables lie on or within the sea bottom and this is the living area for many invertebrate and vertebrate species. North Sea prawn Crangon crangon (Crustacea, Decapoda), round crab Rhithropanopeus harrisii (Crustacea, Brachyura), glacial relict isopod Saduria entomon (Crustacea, Isopoda), blue mussel Mytilus edulis (Bivalvia), and young flounder Plathichthys flesus (Pisces) were exposed to a static magnetic field (MF) of 3.7 mT for several weeks. The results showed no differences in survival between experimental and control animals. Mussels M. edulis were kept under static magnetic field conditions for 3 months during their reproductive period in spring. The determination of gonad index and condition index revealed no significant differences to the control group. 2004 Wiley-Liss, Inc.

  5. Ontogeny of juvenile freshwater pearl mussels, Margaritifera margaritifera (Bivalvia: Margaritiferidae)

    PubMed Central

    Ramsey, Andrew D.; Moorkens, Evelyn A.; Souch, Graham; Barnhart, M. Christopher

    2018-01-01

    The gills of juvenile freshwater bivalves undergo a complex morphogenesis that may correlate with changes in feeding ecology, but ontogenic studies on juvenile mussels are rare. Scanning electron microscopy was used to examine the ultrastructure and ontogeny of 117 juvenile freshwater pearl mussels (Margaritifera margaritifera) ranging in age from 1–44 months and length from 0.49–8.90 mm. Three stages of gill development are described. In Stage 1 (5–9 inner demibranch filaments), only unreflected inner demibranch filaments were present. In Stage 2 (9–17 inner demibranch filaments), inner demibranch filaments began to reflect when shell length exceeded 1.13 mm, at 13–16 months old. Reflection began in medial filaments and then proceeded anterior and posterior. In Stage 3 (28–94 inner demibranch filaments), outer demibranch filaments began developing at shell length > 3.1 mm and about 34 months of age. The oral groove on the inner demibranch was first observed in 34 month old specimens > 2.66 mm but was never observed on the outer demibranch. Shell length (R2 = 0.99) was a better predictor of developmental stage compared to age (R2 = 0.84). The full suite of gill ciliation was present on filaments in all stages. Interfilamentary distance averaged 31.3 μm and did not change with age (4–44 months) or with size (0.75–8.9 mm). Distance between laterofrontal cirri couplets averaged 1.54 μm and did not change significantly with size or age. Labial palp primordia were present in even the youngest individuals but ciliature became more diverse in more developed individuals. Information presented here is valuable to captive rearing programmes as it provides insight in to when juveniles may be particularly vulnerable to stressors due to specific ontogenic changes. The data are compared with two other recent studies of Margaritifera development. PMID:29590123

  6. Methanotrophic marine molluscan (Bivalvia, Mytilidae) symbiosis: mussels fueled by gas

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Childress, J.J.; Fisher, C.R.; Brooks, J.M.

    An undescribed mussel (family Mytilidae), which lives in the vicinity of hydrocarbon seeps in the Gulf of Mexico, consumes methane (the principal component of natural gas) at a high rate. The methane consumption is limited to the gills of these animals and is apparently due to the abundant intracellular bacteria found there. This demonstrates a methane-based symbiosis between an animal and intracellular bacteria. Methane consumption is dependent on the availability of oxygen and is inhibited by acetylene. The consumption of methane by these mussels is associated with a dramatic increase in oxygen consumption and carbon dioxide production. As the methanemore » consumption of the bivalve can exceed its carbide dioxide production, the symbiosis may be able to entirely satisfy its carbon needs from methane uptake. The very light (delta/sup 13/C = -51 to -57 per mil) stable carbon isotope ratios found in this animal support methane (delta/sup 13/C = -45 per mil at this site) as the primary carbon source for both the mussels and their symbionts. 19 references, 2 figures, 1 table.« less

  7. Foods of Spectacled Eiders Somateria fischeri in the Bering Sea, Alaska

    USGS Publications Warehouse

    Petersen, M.R.; Piatt, John F.; Trust, K.A.

    1998-01-01

    The winter diet of Spectacled Eiders living in marine habitats is known only from two individuals described by Cottam (1939). Here we examine marine diets from 36 stomachs collected near St. Lawrence Island, Bering Sea, Alaska, during May-June in 1987 and 1992. All Spectacled Eiders ate Mollusca, including Gastropoda (snails; frequency of occurrence 20.0%; sole taxon 0.0%) and Bivalvia (bivalves; 80.0%; 48.0%), and Crustacea (barnacles, amphipods and crabs; 30.6%; 0.0%). One bird ate a cod. The predominant species group eaten was Macoma Clams (72.0%; 36.0%). Prey species of Spectacled Eiders occur predominantly in waters 25-60 m deep in the Bering Sea. To obtain these prey, especially the bivalves, on the winter area Spectacled Eiders must forage in waters exceeding 40 m. We speculate that Spectacled Eiders regularly forage at depths of 45-70 m throughout winter.

  8. Bacteria of the human gut microbiome catabolize red seaweed glycans with carbohydrate-active enzyme updates from extrinsic microbes.

    PubMed

    Hehemann, Jan-Hendrik; Kelly, Amelia G; Pudlo, Nicholas A; Martens, Eric C; Boraston, Alisdair B

    2012-11-27

    Humans host an intestinal population of microbes--collectively referred to as the gut microbiome--which encode the carbohydrate active enzymes, or CAZymes, that are absent from the human genome. These CAZymes help to extract energy from recalcitrant polysaccharides. The question then arises as to if and how the microbiome adapts to new carbohydrate sources when modern humans change eating habits. Recent metagenome analysis of microbiomes from healthy American, Japanese, and Spanish populations identified putative CAZymes obtained by horizontal gene transfer from marine bacteria, which suggested that human gut bacteria evolved to degrade algal carbohydrates-for example, consumed in form of sushi. We approached this hypothesis by studying such a polysaccharide utilization locus (PUL) obtained by horizontal gene transfer by the gut bacterium Bacteroides plebeius. Transcriptomic and growth experiments revealed that the PUL responds to the polysaccharide porphyran from red algae, enabling growth on this carbohydrate but not related substrates like agarose and carrageenan. The X-ray crystallographic and biochemical analysis of two proteins encoded by this PUL, BACPLE_01689 and BACPLE_01693, showed that they are β-porphyranases belonging to glycoside hydrolase families 16 and 86, respectively. The product complex of the GH86 at 1.3 Å resolution highlights the molecular details of porphyran hydrolysis by this new porphyranase. Combined, these data establish experimental support for the argument that CAZymes and associated genes obtained from extrinsic microbes add new catabolic functions to the human gut microbiome.

  9. Reproductive ecology of Actinonaias ligamentina (Bivalvia:Unionidae) in a regulated river

    USGS Publications Warehouse

    Moles, K.R.; Layzer, J.B.

    2008-01-01

    Factors affecting the reproductive success of freshwater mussels in lotic systems are poorly understood. Gravidity, fecundity, and fertilization success of Actinonaias ligamentina were examined at 4 sites along a 63-km reach of the Green River immediately below the Green River Dam, Kentucky. No gravid females were collected at the site closest to the dam, and the percentage of gravid females at downstream sites ranged from 20 to 36%. Not all females became gravid, despite the presence of early stages of ova in the gonadal fluid. This observation suggests that female A. ligamentina undergo a resting stage and, therefore, might not become gravid every year. Fecundity differed among sites and increased with distance from the dam. Fertilization rates ranged from 32 to 97% among sites and increased with distance from the dam. Fertilization rate was independent of local mussel density and position in the mussel bed. The high fertilization rates observed in the upstream portions of mussel beds indicate that freshwater mussel sperm have the ability to travel to distant females in lotic systems. Therefore, females are not necessarily dependent upon nearby males for fertilization. Successful fertilization of A. ligamentina at low mussel densities in the Green River suggests that natural recovery of rare endangered species might be possible if host fish and suitable conditions for juvenile survival and growth are present. ?? 2008 by The North American Benthological Society.

  10. Non-invasive method to obtain DNA from freshwater mussels (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Henley, W.F.; Grobler, P.J.; Neves, R.J.

    2006-01-01

    To determine whether DNA could be isolated from tissues obtained by brush-swabbing the mantle, viscera and foot, mantle-clips and swabbed cells were obtained from eight Quadrula pustulosa (Lea, 1831). DNA yields from clips and swabbings were 447.0 and 975.3 ??g/??L, respectively. Furthermore, comparisons of sequences from the ND-1 mitochondrial gene region showed a 100% sequence agreement of DNA from cells obtained by clips and swabs. To determine the number of swabs needed to obtain adequate yields of DNA for analyses, the visceras and feet of 5 Q. pustulosa each were successively swabbed 2, 4 and 6 times. DNA yields from the 2, 4 and 6 swabbed mussel groups were 399.4, 833.8 and 852.6 ng/??L, respectively. ND-1 sequences from the lowest yield still provided 846-901 bp for the ND-1 region. Nevertheless, to ensure adequate DNA yield from cell samples obtained by swabbing, we recommend that 4 swab-strokes of the viscera and foot be obtained. The use of integumental swabbing for collection of cells for determination of genetic relationships among freshwater mussels is noninvasive, when compared with tissue collection by mantle-clipping. Therefore, its use is recommended for freshwater mussels, especially state-protected or federally listed mussel species.

  11. Isolation and characterization of microsatellite loci in Alasmidonta heterodon (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Shaw, K.M.; King, T.L.; Lellis, W.A.; Eackles, M.S.

    2006-01-01

    We developed 13 species-specific microsatellite markers for the federally endangered Atlantic slope unionid Alasmidonta heterodon. Four to 18 alleles per locus were observed among 30 individuals. Observed heterozygosity throughout the loci ranged from 26.9 to 86.2% and averaged 63.6%. Estimates of individual pairwise genetic distances indicated that levels of genetic diversity among loci were sufficient to produce unique multilocus genotypes for all animals surveyed. Randomization tests showed that genotypes for this collection were consistent with Hardy-Weinberg expectations, and no significant linkage disequilibrium was observed between loci. These loci therefore appear suitable for population surveys, kinship assessment and other such applications. ?? 2006 Blackwell Publishing Ltd.

  12. Factorial microarray analysis of zebra mussel (Dreissena polymorpha: Dreissenidae, Bivalvia) adhesion

    PubMed Central

    2010-01-01

    Background The zebra mussel (Dreissena polymorpha) has been well known for its expertise in attaching to substances under the water. Studies in past decades on this underwater adhesion focused on the adhesive protein isolated from the byssogenesis apparatus of the zebra mussel. However, the mechanism of the initiation, maintenance, and determination of the attachment process remains largely unknown. Results In this study, we used a zebra mussel cDNA microarray previously developed in our lab and a factorial analysis to identify the genes that were involved in response to the changes of four factors: temperature (Factor A), current velocity (Factor B), dissolved oxygen (Factor C), and byssogenesis status (Factor D). Twenty probes in the microarray were found to be modified by one of the factors. The transcription products of four selected genes, DPFP-BG20_A01, EGP-BG97/192_B06, EGP-BG13_G05, and NH-BG17_C09 were unique to the zebra mussel foot based on the results of quantitative reverse transcription PCR (qRT-PCR). The expression profiles of these four genes under the attachment and non-attachment were also confirmed by qRT-PCR and the result is accordant to that from microarray assay. The in situ hybridization with the RNA probes of two identified genes DPFP-BG20_A01 and EGP-BG97/192_B06 indicated that both of them were expressed by a type of exocrine gland cell located in the middle part of the zebra mussel foot. Conclusions The results of this study suggested that the changes of D. polymorpha byssogenesis status and the environmental factors can dramatically affect the expression profiles of the genes unique to the foot. It turns out that the factorial design and analysis of the microarray experiment is a reliable method to identify the influence of multiple factors on the expression profiles of the probesets in the microarray; therein it provides a powerful tool to reveal the mechanism of zebra mussel underwater attachment. PMID:20509938

  13. Using DNA barcoding to differentiate invasive Dreissena species (Mollusca, Bivalvia)

    PubMed Central

    Marescaux, Jonathan; Van Doninck, Karine

    2013-01-01

    Abstract The zebra mussel (Dreissena polymorpha) and the quagga mussel (Dreissena rostriformis bugensis) are considered as the most competitive invaders in freshwaters of Europe and North America. Although shell characteristics exist to differentiate both species, phenotypic plasticity in the genus Dreissena does not always allow a clear identification. Therefore, the need to find an accurate identification method is essential. DNA barcoding has been proven to be an adequate procedure to discriminate species. The cytochrome c oxidase subunit I mitochondrial gene (COI) is considered as the standard barcode for animals. We tested the use of this gene as an efficient DNA barcode and found that it allow rapid and accurate identification of adult Dreissena individuals. PMID:24453560

  14. Intraspecific phylogenetic relationships in the freshwater bivalve genus Alasmidonta (Bivalvia: Unionidae).

    DOT National Transportation Integrated Search

    2008-02-18

    The genus Alasmidonta currently contains 12 species with 3 species presumed extinct. : Six species of Alasmidonta occur in North Carolina, including the presumed extinct Alasmidonta : robusta. Tissue samples from all taxa of living Alasmidonta specie...

  15. Mesozoic Bivalvia from Clerke and Mermaid Canyons, northwest Australian continental slope

    NASA Astrophysics Data System (ADS)

    Grant-Mackie, J. A.

    Four sets of rock samples from two sites off the northwest Australian shelf in 3625-4480 m of water contain macrofaunas, mainly bivalves, of warm shallow-water origin. Mermaid Canyon (16 deg 19 min S, 118 deg 23 min E) provided many samples of oolitic calcarenite containing Pseudopecten (Pseudopecten) dugong n.sp., indicating an Early Jurassic age and Tethyan relationship. Three hand-specimens from the ridge forming the western edge of Clerke Canyon (16 deg 29 min S, 118 deg 30 min E) yielded a Norian coral-?Lima-oyster assemblage and the Norian-Rhaetian bivalve Palaeocardita aff. globiformis (Boettger). The latter shows relationship with south-east Asian (Indonesia-Vietnam-south China) forms.

  16. Chlorine toxicity to early life stages of freshwater mussels (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Valenti, T.W.; Cherry, D.S.; Currie, R.J.; Neves, R.J.; Jones, J.W.; Mair, R.; Kane, C.M.

    2006-01-01

    Chlorine (Cl) is a highly toxic, widely used halogen disinfectant that is present in point-source pollution discharges from wastewater treatment plants and industrial facilities. The U.S. Environmental Protection Agency freshwater criteria for Cl are 19 ??g total residual Cl (TRC)/L as a maximum 1-h average concentration and 11 ??g TRC/L as a maximum 4-d average; however, toxicological data for unionids were not used in these calculations. To address this void in the data, we conducted acute tests with glochidia from several species and 21-d bioassays with three-month-old Epioblasma capsaeformis and three-, six-, and 12-month-old Villosa iris juveniles. The 24-h lethal concentration 50 values for glochidia were between 70 and 220 ??g TRC/L, which are 2.5 to 37 times higher than those reported in other studies for cladocerans. Significant declines in growth and survivorship were observed in the 21-d test with E. capsaeformis at 20 ??g TRC/L. Lowest-observed-adverse- effects concentrations in bioassays with juvenile V. iris were higher (30-60 ??g TRC/L) but showed a significant trend of declining toxicity with increased age. Although endpoints were above water quality criteria, the long life spans of unionids and potential implications of chronic exposure to endangered juvenile mussels still warrant concern. ?? 2006 SETAC.

  17. An Efficient Method for Genomic DNA Extraction from Different Molluscs Species

    PubMed Central

    Pereira, Jorge C.; Chaves, Raquel; Bastos, Estela; Leitão, Alexandra; Guedes-Pinto, Henrique

    2011-01-01

    The selection of a DNA extraction method is a critical step when subsequent analysis depends on the DNA quality and quantity. Unlike mammals, for which several capable DNA extraction methods have been developed, for molluscs the availability of optimized genomic DNA extraction protocols is clearly insufficient. Several aspects such as animal physiology, the type (e.g., adductor muscle or gills) or quantity of tissue, can explain the lack of efficiency (quality and yield) in molluscs genomic DNA extraction procedure. In an attempt to overcome these aspects, this work describes an efficient method for molluscs genomic DNA extraction that was tested in several species from different orders: Veneridae, Ostreidae, Anomiidae, Cardiidae (Bivalvia) and Muricidae (Gastropoda), with different weight sample tissues. The isolated DNA was of high molecular weight with high yield and purity, even with reduced quantities of tissue. Moreover, the genomic DNA isolated, demonstrated to be suitable for several downstream molecular techniques, such as PCR sequencing among others. PMID:22174651

  18. Closed recirculating system for shrimp-mollusk polyculture

    NASA Astrophysics Data System (ADS)

    Wu, Xiongfei; Zhao, Zhidong; Li, Deshang; Chang, Kangmei; Tong, Zhuanshang; Si, Liegang; Xu, Kaichong; Ge, Bailin

    2005-12-01

    This paper deals with a new system of aquaculture, i.e., a closed recirculating system for shrimp-mollusk polyculture. The culture system consisted of several shrimp ponds, a mollusk water-purifying pond and a reservoir. During the production cycle, water circulated between the shrimp and mollusk ponds, and the reservoir compensated for water loss from seepage and evaporation. Constricted tagelus, Sinonovacula constricta, was selected as the cultured mollusk, and Pacific white shrimp, Litopenaeus vannamei, as the cultured shrimp. The main managing measures during the production cycle were: setting and using the aerators; introducting the probiotic products timely into the shrimp ponds; adopting a “pen-closing” method for controlling shrimp viral epidemics; setting the flow diversion barriers in the mollusk pond to keep the circulating water flowing through the pond along a sine-like curve and serve as substrate for biofilm; no direct feeding was necessary for the cultured mollusk until the co-cultured shrimp was harvested; natural foods in the water from the shrimp ponds was used for their foods. Two sets of the system were used in the experiment in 2002 and satisfactory results were achieved. The average yield of the shrimp was 11 943.5 kg/hm2, and that of the mollusk was 16 965 kg/hm2. After converting the mollusk yield into shrimp yield at their market price ratio, the food coefficient of the entire system averaged at as low as 0.81. The water quality in the ponds was maintained at a desirable level and no viral epidemics were discovered during the production cycle.

  19. Oocyte Degeneration Associated with Follicle Cells in Female Mactra chinensis (Bivalvia: Mactridae)

    PubMed Central

    Kim, Sung Han; Chung, Ee-Yung; Lee, Ki-Young

    2014-01-01

    Ultrastructural studies of oocyte degeneration in the oocyte, and the functions of follicle cells during oocyte degeneration are described to clarify the reproductive mechanism on oocyte degeneration of Mactra chinensis using cytological methods. Commonly, the follicle cells are attached to the oocyte. Follicle cells play an important role in oocyte degeneration. In particular, the functions of follicle cells during oocyte degeneration are associated with phagocytosis and the intracellular digestion of products. In this study, morphologically similar degenerated phagosomes (various lysosomes), which were observed in the degenerated oocytes, appeared in the follicle cells. After the spawning of the oocytes, the follicle cells were involved in oocyte degeneration through phagocytosis by phagolysosomes. Therefore, it can be assumed that follicle cells reabsorb phagosomes from degenerated oocytes. In this study, the presence of lipid granules, which occurred from degenerating yolk granules, gradually increased in degenerating oocytes. The function of follicle cells can accumulate reserves of lipid granules and glycogen in the cytoplasm, which can be employed by the vitellogenic oocyte. Based on observations of follicle cells attached to degenerating oocytes after spawning, the follicle cells of this species are involved in the lysosomal induction of oocyte degeneration for the reabsorption of phagosomes (phagolysosomes) in the cytoplasm for nutrient storage, as seen in other bivalves. PMID:25949203

  20. Intraspecific phylogeography of Lasmigona subviridis (Bivalvia: Unionidae): Conservation implications of range discontinuity

    USGS Publications Warehouse

    King, T.L.; Eackles, M.S.; Gjetvaj, B.; Hoeh, W.R.

    1999-01-01

    A nucleotide sequence analysis of the first internal transcribed spacer region (ITS-1) between the 5.8S and 18S ribosomal DNA genes (640 bp) and cytochrome c oxidase subunit I (COI) of mitochondrial DNA (mtDNA) (576 bp) was conducted for the freshwater bivalve Lasmigona subviridis and three congeners to determine the utility of these regions in identifying phylogeographic and phylogenetic structure. Sequence analysis of the ITS-1 region indicated a zone of discontinuity in the genetic population structure between a group of L. subviridis populations inhabiting the Susquehanna and Potomac Rivers and more southern populations. Moreover, haplotype patterns resulting from variation in the COI region suggested an absence of gene exchange between tributaries within two different river drainages, as well as between adjacent rivers systems. The authors recommend that the northern and southern populations, which are reproductively isolated and constitute evolutionarily significant lineages, be managed as separate conservation units. Results from the COI region suggest that, in some cases, unionid relocations should be avoided between tributaries of the same drainage because these populations may have been reproductively isolated for thousands of generations. Therefore, unionid bivalves distributed among discontinuous habitats (e.g. Atlantic slope drainages) potentially should be considered evolutionarily distinct. The DNA sequence divergences observed in the nuclear and mtDNA regions among the Lasmigona species were congruent, although the level of divergence in the COI region was up to three times greater. The genus Lasmigona, as represented by the four species surveyed in this study, may not be monophyletic.

  1. Convergent and parallel evolution in life habit of the scallops (Bivalvia: Pectinidae)

    PubMed Central

    2011-01-01

    Background We employed a phylogenetic framework to identify patterns of life habit evolution in the marine bivalve family Pectinidae. Specifically, we examined the number of independent origins of each life habit and distinguished between convergent and parallel trajectories of life habit evolution using ancestral state estimation. We also investigated whether ancestral character states influence the frequency or type of evolutionary trajectories. Results We determined that temporary attachment to substrata by byssal threads is the most likely ancestral condition for the Pectinidae, with subsequent transitions to the five remaining habit types. Nearly all transitions between life habit classes were repeated in our phylogeny and the majority of these transitions were the result of parallel evolution from byssate ancestors. Convergent evolution also occurred within the Pectinidae and produced two additional gliding clades and two recessing lineages. Furthermore, our analysis indicates that byssal attaching gave rise to significantly more of the transitions than any other life habit and that the cementing and nestling classes are only represented as evolutionary outcomes in our phylogeny, never as progenitor states. Conclusions Collectively, our results illustrate that both convergence and parallelism generated repeated life habit states in the scallops. Bias in the types of habit transitions observed may indicate constraints due to physical or ontogenetic limitations of particular phenotypes. PMID:21672233

  2. Comparative analysis of riverscape genetic structure in rare, threatened and common freshwater mussels

    USGS Publications Warehouse

    Galbraith, Heather S.; Zanatta, David T.; Wilson, Chris C.

    2015-01-01

    Freshwater mussels (Bivalvia: Unionoida) are highly imperiled with many species on the verge of local extirpation or global extinction. This study investigates patterns of genetic structure and diversity in six species of freshwater mussels in the central Great Lakes region of Ontario, Canada. These species vary in their conservation status (endangered to not considered at risk), life history strategy, and dispersal capabilities. Evidence of historical genetic connectivity within rivers was ubiquitous across species and may reflect dispersal abilities of host fish. There was little to no signature of recent disturbance events or bottlenecks, even in endangered species, likely as a function of mussel longevity and historical population sizes (i.e., insufficient time for genetic drift to be detectable). Genetic structure was largely at the watershed scale suggesting that population augmentation via translocation within rivers may be a useful conservation tool if needed, while minimizing genetic risks to recipient sites. Recent interest in population augmentation via translocation and propagation may rely on these results to inform management of unionids in the Great Lakes region.

  3. High expression of new genes in trochophore enlightening the ontogeny and evolution of trochozoans.

    PubMed

    Xu, Fei; Domazet-Lošo, Tomislav; Fan, Dingding; Dunwell, Thomas L; Li, Li; Fang, Xiaodong; Zhang, Guofan

    2016-10-04

    Animals with trochophore larvae belong to Trochozoa, one of the main branches of Bilateria. In addition to exhibiting spiral cleavage and early cell fate determination, trochozoans typically undergo indirect development, which contributes to the most unique characteristics of their ontogeny. The indirect development of trochozoans has provoked discussion regarding the origin and evolution of marine larvae and is interesting from the perspective of phylogeny-ontogeny correspondence. While these phylo-onto correlations have an hourglass shape in Deuterostomia, Ecdysozoa, plants and even fungi, they have seldom been studied in Trochozoa, and even Lophotrochozoa. Here, we compared the ontogenetic transcriptomes of the Pacific oyster, Crassostrea gigas (Bivalvia, Mollusca), the Pacific abalone, Haliotis discus hannai (Gastropoda, Mollusca), and the sand worm Perinereis aibuhitensis (Polychaeta, Annelida) using several complementary phylotranscriptomic methods to examine their evolutionary trajectories. The results revealed the late trochophore stage as the phylotypic phase. However, this basic pattern is accompanied with increased use of new genes in the trochophore stages which marks specific adaptations of the larval body plans.

  4. [Diversity and abundance of molluscs in Thalassia testudinum prairie of the Bay of Mochinma, Mochima National Park, Venezuela].

    PubMed

    Prieto, Antulio; Sant, Sybil; Méndez, Elizabeth; Lodeiros, César

    2003-06-01

    The diversity and abundance of benthic malacological communities associated to Thalassia testudinum beds was studied at four localities of Mochima Bay, Sucre state, Venezuela. At each locality, samples were taken monthly on perpendicular transect at different depths (0-4 m), from January 1991 to December 1991, using a quadrate (0.25 m2) for collecting mollusks and sediments. A total of 2,988 organisms of infauna and epifauna belonging to 81 species of the classes Gastropoda (41) and Bivalvia (40) were collected. More abundant species were Anadara notabilis, Codakia orbicularis, Cerithium litteratum, Cerithium eburneum, Batillaria minima, Modiolus squamosus, Modulus modulus, Chione cancellata, Turritella variegata, Arca zebra, y Laevicardium laevigatum. There were significant differences in number of organisms between depth and month at La Gabarra which presented the highest value of total (4.51 bits/ind) and monthly diversity (2.71-3.90 bits/ind). Biomass and abundance were low in the Mochima Bay while Varadero station presented the highest value. The bivalve A. notabilis and gastropod M. modulus were species common to the four stations.

  5. Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota.

    PubMed

    Hehemann, Jan-Hendrik; Correc, Gaëlle; Barbeyron, Tristan; Helbert, William; Czjzek, Mirjam; Michel, Gurvan

    2010-04-08

    Gut microbes supply the human body with energy from dietary polysaccharides through carbohydrate active enzymes, or CAZymes, which are absent in the human genome. These enzymes target polysaccharides from terrestrial plants that dominated diet throughout human evolution. The array of CAZymes in gut microbes is highly diverse, exemplified by the human gut symbiont Bacteroides thetaiotaomicron, which contains 261 glycoside hydrolases and polysaccharide lyases, as well as 208 homologues of susC and susD-genes coding for two outer membrane proteins involved in starch utilization. A fundamental question that, to our knowledge, has yet to be addressed is how this diversity evolved by acquiring new genes from microbes living outside the gut. Here we characterize the first porphyranases from a member of the marine Bacteroidetes, Zobellia galactanivorans, active on the sulphated polysaccharide porphyran from marine red algae of the genus Porphyra. Furthermore, we show that genes coding for these porphyranases, agarases and associated proteins have been transferred to the gut bacterium Bacteroides plebeius isolated from Japanese individuals. Our comparative gut metagenome analyses show that porphyranases and agarases are frequent in the Japanese population and that they are absent in metagenome data from North American individuals. Seaweeds make an important contribution to the daily diet in Japan (14.2 g per person per day), and Porphyra spp. (nori) is the most important nutritional seaweed, traditionally used to prepare sushi. This indicates that seaweeds with associated marine bacteria may have been the route by which these novel CAZymes were acquired in human gut bacteria, and that contact with non-sterile food may be a general factor in CAZyme diversity in human gut microbes.

  6. Variation in social systems within Chaetodon butterflyfishes, with special reference to pair bonding.

    PubMed

    Nowicki, Jessica P; O'Connell, Lauren A; Cowman, Peter F; Walker, Stefan P W; Coker, Darren J; Pratchett, Morgan S

    2018-01-01

    For many animals, affiliative relationships such as pair bonds form the foundation of society and are highly adaptive. Animal systems amenable for comparatively studying pair bonding are important for identifying underlying biological mechanisms, but mostly exist in mammals. Better establishing fish systems will enable comparison of pair bonding mechanisms across taxonomically distant lineages that may reveal general underlying mechanistic principles. We examined the utility of wild butterflyfishes (f: Chaetodontidae; g: Chaetodon) for comparatively studying pair bonding. Using stochastic character mapping, we provide the first analysis of the evolutionary history of butterflyfish sociality, revealing that pairing is ancestral, with at least seven independent transitions to gregarious grouping and solitary behavior since the late Miocene. We then formally verified social systems in six sympatric and wide-spread species representing a clade with one ancestrally reconstructed transition from paired to solitary grouping at Lizard Island, Australia. In situ observations of the size, selective affiliation and aggression, fidelity, and sex composition of social groups confirmed that Chaetodon baronessa, C. lunulatus, and C. vagabundus are predominantly pair bonding, whereas C. rainfordi, C. plebeius, and C. trifascialis are predominantly solitary. Even in the predominantly pair bonding species, C. lunulatus, a proportion of adults (15%) are solitary. Importantly, inter- and intra-specific differences in social systems do not co-vary with other previously established attributes, including parental care. Hence, the proposed butterflyfish populations are promising for inter- and intra-species comparative analyses of pair bonding and its mechanistic underpinnings. Avenues for further developing the system are proposed, including determining whether the aforementioned utility of these species applies across their geographic disruptions.

  7. Variation in social systems within Chaetodon butterflyfishes, with special reference to pair bonding

    PubMed Central

    O’Connell, Lauren A.; Cowman, Peter F.; Walker, Stefan P. W.; Coker, Darren J.; Pratchett, Morgan S.

    2018-01-01

    For many animals, affiliative relationships such as pair bonds form the foundation of society and are highly adaptive. Animal systems amenable for comparatively studying pair bonding are important for identifying underlying biological mechanisms, but mostly exist in mammals. Better establishing fish systems will enable comparison of pair bonding mechanisms across taxonomically distant lineages that may reveal general underlying mechanistic principles. We examined the utility of wild butterflyfishes (f: Chaetodontidae; g: Chaetodon) for comparatively studying pair bonding. Using stochastic character mapping, we provide the first analysis of the evolutionary history of butterflyfish sociality, revealing that pairing is ancestral, with at least seven independent transitions to gregarious grouping and solitary behavior since the late Miocene. We then formally verified social systems in six sympatric and wide-spread species representing a clade with one ancestrally reconstructed transition from paired to solitary grouping at Lizard Island, Australia. In situ observations of the size, selective affiliation and aggression, fidelity, and sex composition of social groups confirmed that Chaetodon baronessa, C. lunulatus, and C. vagabundus are predominantly pair bonding, whereas C. rainfordi, C. plebeius, and C. trifascialis are predominantly solitary. Even in the predominantly pair bonding species, C. lunulatus, a proportion of adults (15%) are solitary. Importantly, inter- and intra-specific differences in social systems do not co-vary with other previously established attributes, including parental care. Hence, the proposed butterflyfish populations are promising for inter- and intra-species comparative analyses of pair bonding and its mechanistic underpinnings. Avenues for further developing the system are proposed, including determining whether the aforementioned utility of these species applies across their geographic disruptions. PMID:29641529

  8. Multi-species generalist predation on the stochastic harvested clam Tivela mactroides (Mollusca, Bivalvia)

    NASA Astrophysics Data System (ADS)

    Turra, Alexander; Fernandez, Wellington S.; Bessa, Eduardo; Santos, Flavia B.; Denadai, Márcia R.

    2015-12-01

    Top-down control is an important force modulating the abundance of prey and structuring marine communities. The harvested trigonal clam Tivela mactroides is hypothesized to be part of the diet of a variety of marine organisms, with its stock influencing predator abundance and being influenced by them. Here we analyzed the diet of potential predators of T. mactroides in Caraguatatuba Bay, northern coast of São Paulo State, Brazil, to identify the main consumers of this marine resource, and also to address the importance of this clam in the diet of each predator. Samples were taken year-round by trawls; all specimens collected were identified and measured and the food items identified and quantified. Twenty-one species consumed T. mactroides, whose importance in the diet varied greatly in both the volume ingested and the frequency of occurrence (pompano Trachinotus carolinus > blue crab Callinectes danae > starfish Astropecten marginatus). Top-down influence on T. mactroides was also dependent on the abundance of consumers (yellow catfish Cathorops spixii > rake stardrum Stellifer rastrifer > barred grunt Conodon nobilis > A. marginatus). Considering the mean volume ingested, the frequency of occurrence of T. mactroides in the diet, and the relative abundance of consumers, the predators that most influenced T. mactroides were T. carolinus, A. marginatus, and C. danae, in decreasing order. Large numbers of small-sized individuals of T. mactroides (<10 mm) were generally preyed upon by A. marginatus, which may have a stronger effect on clam abundance in comparison to C. danae and T. carolinus, which preyed upon larger clams. In conclusion, the results of this study indicate that predators' consumption of T. mactroides in Caraguatatuba Bay can influence its stocks, mainly due to the type and/or abundance of predator species, the volume and number of individuals of T. mactroides preyed upon, and the temporal variations in the abundance of predators.

  9. Life history and propagation of the endangered dromedary pearlymussel (Dromus dromas) (Bivalvia:Unionidae)

    USGS Publications Warehouse

    Jones, J.W.; Neves, R.J.; Ahlstedt, S.A.; Mair, R.A.

    2004-01-01

    The reproduction, demography, and propagation of the endangered dromedary pearlymussel (Dromus dromas) (Lea, 1834) were studied in the Clinch and Powell rivers, Tennessee. Viable populations of the dromedary pearlymussel now occur only in the Clinch and Powell rivers; the species has been extirpated from the remaining portions of its range in the Cumberland and Tennessee river drainages. Females are long-term winter brooders, and they are gravid from October to June. Glochidia are contained in conglutinates that are red to white and resemble freshwater leeches or flatworms. Conglutinates are 20 to 40 mm long and are released through the excurrent aperture. Estimates of fecundity based on 7 gravid females collected from the Clinch River were 55,110 to 253,050 glochidia/mussel. The ages of 66 valves of D. dromas were determined by thin-sectioning and ranged from 3 to 25 y. Annual growth averaged 5 mm/y until age 10 and decreased to ???1.2 mm/ y thereafter. Nineteen fish species were tested for suitability as hosts for glochidia. Ten were confirmed as hosts through induced infestations of glochidia: black sculpin (Cottus baileyi), greenside darter (Etheostoma blennioides), fantail darter (Etheostoma flabellare), snubnose darter (Etheostoma simoterum), tangerine darter (Percina aurantiaca), blotchside logperch (Percina burtoni), logperch (Percina caprodes), channel darter (Percina copelandi), gilt darter (Percina evides), and Roanoke darter (Percina roanoka). Juveniles produced from these hosts were cultured in dishes held in nonrecirculating aquaculture systems containing fine sediment (<105 ??m) and were fed the green alga Nannochloropsis oculata every 2 d. Survival of 2810 newly metamorphosed juveniles was 836 (29.7%) after 1 to 2 wk.

  10. Morphology of glochidia of Lampsilis higginsi (Bivalvia: Unionidae) compared with three related species

    USGS Publications Warehouse

    Waller, D.L.; Holland Bartels, L. E.; Mitchell, L.G.

    1988-01-01

    Glochidia of the endangered unionid mussel Lampsilis higginsi (Lea) are morphologically similar to those of several other species in the upper Mississippi River. Life history details, such as the timing of reproduction and identity of host fish, can be readily studied if the glochidia of L. higginsi can be distinguished from those of related species. Authors used light and scanning electron microscopy and statistical analyses of three shell measurements, shell length, shell height, and hinge length, to compare the glochidia of L. higginsi with those of L. radiata siliquoidea (Barnes), L. ventricosa (Barnes), and Ligumia recta (Lamarck). Glochidia of L. higginsi were differentiated by scanning electron microscopy on the basis of a combined examination of the position of the hinge ligament and the width of dorsal ridges, but were indistinguishable by light microscope examination or by statistical analyses of measurements.

  11. Analysis of the shapes of hemocytes of Callista brevisiphonata in vitro (Bivalvia, Veneridae).

    PubMed

    Karetin, Yu A; Pushchin, I I

    2015-08-01

    Fractal formalism in conjunction with linear methods of image analysis is suitable for the comparative analysis of such "irregular" shapes (from the point of view of classical Euclidean geometry) as flattened amoeboid cells of invertebrates in vitro. Cell morphology of in vitro spreading hemocytes from the bivalve mollusc Callista brevisiphonata was analyzed using correlation, factor and cluster analysis. Four significantly different cell types were identified on the basis of 36 linear and nonlinear parameters. The analysis confirmed the adequacy of the selected methodology for numerical description of the shape and the adequacy of classification of nonlinear shapes of spread hemocytes belonging to the same species. Investigation has practical significance for the description of the morphology of cultured cells, since cell shape is a result of summation of a number of extracellular and intracellular factors. © 2015 International Society for Advancement of Cytometry.

  12. Gonadal cycle of Corbicula fluminea (Bivalvia: Corbiculidae) in Pampean streams (Southern Neotropical Region)

    PubMed Central

    2017-01-01

    Corbicula fluminea is an aggressive invasive species of bivalve that arrived into the Río de la Plata River between the late 60’s and early 70’s, and dispersed widely throughout the Neotropical region, evidencing a great adaptive flexibility to different environmental conditions. This species is a functional hermaphrodite with larval incubation inside the inner demibranch. Despite its widespread distribution, there are no previous studies of complete gonadal histology and reproductive cycle for this species in the Neotropical region. In this study, the reproductive dynamics of C. fluminea in a temperate region, the Santa Catalina Pampean stream, Argentina, is described. Samples of 20–30 individuals were collected monthly from April 2003-April 2005 and processed using traditional histological techniques. During the two years of this study, seven spawning events were recognized. Three major spawns occurred in spring and summer, and other four minor ones during summer and autumn. Events of oocyte recovery were observed after spawning. A high number of incubating individuals was detected. The results stressed the difficulty of identifying a particular pattern of gamete release and of spawning behaviour in this invasive species, especially when inhabiting an unstable environment. PMID:29065185

  13. Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

    NASA Astrophysics Data System (ADS)

    Bell, James B.; Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Reid, William D. K.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

    2016-09-01

    Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe-metazoan interactions.

  14. Meiobenthos assemblages in the mekong estuarine system with special focus on free-living marine nematodes

    NASA Astrophysics Data System (ADS)

    Quang, Ngo Xuan; Vanreusel, Ann; Smol, Nic; Chau, Nguyen Ngoc

    2010-12-01

    Meiobenthos assemblages in eight estuaries of the Mekong river system were investigated in August 2008 (from the Cua Tieu estuary to the Tran De estuary). In each estuary, one sampling station was established for meiobenthos sampling. Twelve major taxa of meiobenthos were recorded in this estuarine system, including Nematoda, Copepoda, Turbellaria, Polychaeta, Oligochaeta, Tardigrada, Bivalvia, Ostracoda, Amphipoda, Cumacea, Gastrotricha, Gastropoda, and Crustacean Nauplii larvae. The densities of the meiobenthos range from 581 to 3168 inds/10 cm2. Nematodes always occupy the highest numbers with a percentage ranging from 64-99%. There are 135 nematode genera recorded in this study with the following as dominant genera Desmodora, Leptolaimus, Halalaimus, Thalassomonhystera, Theristus, Daptonema, Rhynchonema, Parodontophora, and Oncholaimus. Although the biodiversity of the meiobenthos at higher taxa level is not high compared to other marine environments, the estimates of nematode biodiversity at the genus level indicates high values. The increase in number of genera with increasing sampling intensity illustrate that the diversity is underestimated and would have been higher if the authors had considered a larger number of individuals, more replicates per station, and more sampling stations.

  15. Influence of the Bottom Sediment Characteristics on the Bivalve Mollusk Anadara kagoshimensis Histopathology's Variability in the Northeastern Coast of the Black Sea

    NASA Astrophysics Data System (ADS)

    Kolyuchkina, G. A.; Budko, D. F.; Chasovnikov, V. K.; Chzhu, V. P.

    2017-11-01

    With increasing anthropogenic impact on the environment, investigations of organism's response to the contamination of natural habitats, are especially relevant. In the present study, we sought to identify the correlation between the bottom sediments and local variability in histopathology of Anadara kagoshimensis (Bivalvia) in four sites of the north-eastern coast of the Black Sea. Bottom sediment grain size, redox potential of pore water, heavy metals, benzo-α-pyrene and DDT concentrations have been used as characteristics of bottom sediments. Analysis of the data revealed differences in the geochemical background of the studied sites and the histopathological state of the molluscs from these areas. Among the 10 studied elements as well as benzo-α-pyrene and DDT, only Ni has shown an exceedance of statutory limits of concentration in bottom sediments. The study reveals a relationship between Ni concentration in the bottom sediments and frequency of heavy histopathologies in the molluscs. In addition to causes directly related to pollution, mild pathology may be influenced by "natural" causes; in particular, the high content of brown cells in the connective tissue of the digestive gland may be due to the age of molluscs.

  16. Ingestion Rates and Absorption Efficiencies of Abra ovata(Mollusca: Bivalvia) Fed on Macrophytobenthic Detritus

    NASA Astrophysics Data System (ADS)

    Charles, F.; Grémare, A.; Amouroux, J. M.

    1996-01-01

    Ingestion and absorption were investigated in the deposit-feeding bivalve Abra ovatafed on 14C-formaldehyde-labelled detritus derived from 11 macrophytes: Posidonia oceanica, Cystoseira compressa, Padina pavonica, Stypocaulon scoparium, Colpomenia sinuosa, Cystoseira mediterranea, Dilophus spiralis, Rissoella verruculosa, Ulva rigida, Corallina elongata andCodium vermilara . Labelling efficiency ranged from 3·2 (R. verruculosa ) to 53·0% (C. sinuosa) depending on the detritus. The stability of the labelling also varied among detritus types, and was negatively correlated with labelling efficiency. For all types of detritus, the exchanges of radioactivity between compartments were dominated by the transfer between particulate organic matter (POM) and bivalves. These transfers resulted from the interactions between the processes of ingestion, defaecation, and recycling of faeces. The coexistence of these processes together with the occasional lack of stability of the label complicated the actual determination of ingestion rates and absorption efficiencies, which necessitated the use of mathematical modelling. The model was initially composed of five compartments: Detritus, Bivalves, Dissolved organic matter (DOM), CO 2, and Faeces. Two first-order time delays were introduced to account for the production of faeces and CO 2by the bivalves. These delays resulted in the subdivision of the Bivalves compartment into three subcompartments: bivIng, bivDig, and bivAbs. The model also accounts for differences in utilization rates of detritus and faeces by the bivalves. It simulates the exchange of radioactivity between compartments and allows the quantification of ingestion and absorption efficiencies. Our results show large differences in both ingestion rates and absorption efficiencies of A. ovatafed on different types of detritus. Ingestion rates ranged between 0·16 ( C. mediterraneaand D. spiralis) and 8·65 μgOM mgDW -1 h -1( U. rigida). Absorption efficiencies ranged between 0·5 ( C. sinuosa) and 11·4% ( C. elongata). These results were related to the main characteristics of the detritus by using a principal component analysis. Results show a negative effect of both protein and phenolic contents on ingestion rates, and a negative effect of phenolic contents on absorption efficiencies, in good agreement with the existing literature.

  17. Morphological and molecular analyses of Anodontinae species (Bivalvia, Unionidae) of Lake Baikal and Transbaikalia

    PubMed Central

    Klishko, Olga K.; Bogan, Arthur E.

    2018-01-01

    The diversity and taxonomy of anodontine species in Lake Baikal and Transbaikalia region has been contentious since it is based on a typological species concept, the so called “Comparatory Method”. Using this method, six Comparatory anodontine species have been described for the study area as belonging to the genus Colletopterum. This genus was separated from Anodonta based on shell characteristics and further split into two subgenera, i.e. Colletopterum sensu stricto and Colletopterum (Piscinaliana). However, many authors do not recognize this separation maintaining all Colletopterum forms within Anodonta. The current study clarifies the taxonomy and systematics of Anodontinae in this region, using a combination of molecular, morphological and anatomical data. All previously recognized Comparatory forms are here recognized as a single species, i.e. Anodonta anatina. PMID:29630628

  18. Microbial Distribution and Abundance in the Digestive System of Five Shipworm Species (Bivalvia: Teredinidae)

    PubMed Central

    Betcher, Meghan A.; Fung, Jennifer M.; Han, Andrew W.; O’Connor, Roberta; Seronay, Romell; Concepcion, Gisela P.; Distel, Daniel L.; Haygood, Margo G.

    2012-01-01

    Marine bivalves of the family Teredinidae (shipworms) are voracious consumers of wood in marine environments. In several shipworm species, dense communities of intracellular bacterial endosymbionts have been observed within specialized cells (bacteriocytes) of the gills (ctenidia). These bacteria are proposed to contribute to digestion of wood by the host. While the microbes of shipworm gills have been studied extensively in several species, the abundance and distribution of microbes in the digestive system have not been adequately addressed. Here we use Fluorescence In-Situ Hybridization (FISH) and laser scanning confocal microscopy with 16S rRNA directed oligonucleotide probes targeting all domains, domains Bacteria and Archaea, and other taxonomic groups to examine the digestive microbiota of 17 specimens from 5 shipworm species (Bankia setacea, Lyrodus pedicellatus, Lyrodus massa, Lyrodus sp. and Teredo aff. triangularis). These data reveal that the caecum, a large sac-like appendage of the stomach that typically contains large quantities of wood particles and is considered the primary site of wood digestion, harbors only very sparse microbial populations. However, a significant number of bacterial cells were observed in fecal pellets within the intestines. These results suggest that due to low abundance, bacteria in the caecum may contribute little to lignocellulose degradation. In contrast, the comparatively high population density of bacteria in the intestine suggests a possible role for intestinal bacteria in the degradation of lignocellulose. PMID:23028923

  19. Life history and propagation of the endangered fanshell pearlymussel, Cyprogenia stegaria Rafinesque (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Jones, J.W.; Neves, R.J.

    2002-01-01

    Aspects of the reproduction, age, growth, fish hosts, and culture of juveniles were determined for the endangered fanshell pearlymussel, Cyprogenia stegaria Rafinesque, 1820, in the Clinch River, Tennessee. Glochidia of C. stegaria are contained in red, worm-like conglutinates that resemble oligochaetes. Conglutinates are 20 to 80 mm long and are released through the excurrent aperture. Estimated fecundity was 22,357 to 63,459 glochidia/mussel. Eighty-four valves of C. stegaria were thin-sectioned for aging; ages ranged from 6 to 26 y. Of 16 fish species tested, 9 hosts were identified through induced infestations of glochidia: mottled sculpin (Cottus bairdi), banded sculpin (Cottus carolinae), greenside darter (Etheostoma blennioides), snubnose darter (Etheostoma simoterurn), banded darter (Etheostoma zonale), tangerine darter (Percina aurantiaca), blotchside logperch (Percina burtoni), logperch (Percina caprodes), and Roanoke darter (Percina roanoka). Newly metamorphosed juveniles were cultured in recirculating and nonrecirculating aquaculture systems within dishes containing sediments of 300 to 500 ??m diameter (sand) or <105 ??m diameter (silt), and fed either the green algae Neochloris oleoabundans or Scenedesrnus quadricauda daily. Growth and survival of juvenile mussels were highest in the nonrecirculating aquaculture system, with a mean survival of 72% after 2 wk and 38% after 4 wk.

  20. Identifying the true oysters (Bivalvia: Ostreidae) with mitochondrial phylogeny and distance-based DNA barcoding.

    PubMed

    Liu, Jun; Li, Qi; Kong, Lingfeng; Yu, Hong; Zheng, Xiaodong

    2011-09-01

    Oysters (family Ostreidae), with high levels of phenotypic plasticity and wide geographic distribution, are a challenging group for taxonomists and phylogenetics. As a useful tool for molecular species identification, DNA barcoding might offer significant potential for oyster identification and taxonomy. This study used two mitochondrial fragments, cytochrome c oxidase I (COI) and the large ribosomal subunit (16S rDNA), to assess whether oyster species could be identified by phylogeny and distance-based DNA barcoding techniques. Relationships among species were estimated by the phylogenetic analyses of both genes, and then pairwise inter- and intraspecific genetic divergences were assessed. Species forming well-differentiated clades in the molecular phylogenies were identical for both genes even when the closely related species were included. Intraspecific variability of 16S rDNA overlapped with interspecific divergence. However, average intra- and interspecific genetic divergences for COI were 0-1.4% (maximum 2.2%) and 2.6-32.2% (minimum 2.2%), respectively, indicating the existence of a barcoding gap. These results confirm the efficacy of species identification in oysters via DNA barcodes and phylogenetic analysis. © 2011 Blackwell Publishing Ltd.

  1. Misidentification of freshwater mussel species (Bivalvia:Unionidae): contributing factors, management implications, and potential solutions

    USGS Publications Warehouse

    Shea, Colin P.; Peterson, James T.; Wisniewski, Jason M.; Johnson, Nathan A.

    2011-01-01

    Surveys of freshwater mussel populations are used frequently to inform conservation decisions by providing information about the status and distribution of species. It is generally accepted that not all mussels or species are collected during surveys, and incomplete detection of individuals and species can bias data and can affect inferences. However, considerably less attention has been given to the potential effects of species misidentification. To evaluate the prevalence of and potential reasons for species misidentification, we conducted a laboratory-based identification exercise and quantified the relationships between mussel species characteristics, observer experience, and misidentification rate. We estimated that misidentification was fairly common, with rates averaging 27% across all species and ranging from 0 to 56%, and was related to mussel shell characteristics and observer experience. Most notably, species with shell texturing were 6.09× less likely than smooth-shelled species to be misidentified. Misidentification rates declined with observer experience, but for many species the risk of misidentification averaged >10% even for observers with moderate levels of experience (5–6 y). In addition, misidentification rates among observers showed substantial variability after controlling for experience. Our results suggest that species misidentification may be common in field surveys of freshwater mussels and could potentially bias estimates of population status and trends. Misidentification rates possibly could be reduced through use of regional workshops, testing and certification programs, and the availability of archived specimens and tissue samples in museum collections.

  2. Host fishes and host-attracting behavior of Lampsilis altilis and Villosa vibex (Bivalvia: Unionidae)

    Treesearch

    Wendell R. Haag; Melvin L. Warren; Mahala Shillingsford

    1999-01-01

    Suitable host fishes were identified for two species of freshwater mussels (Unionidae) from the Coosa River drainage, Mobile Basin: Lampsilis altilis, the fine-lines pocketbook and Villosa vibex, the southern rainbow. Suitable hosts are defined as fishes that produce juvenile mussels from glochidial infestations in the laboratory....

  3. Microbial distribution and abundance in the digestive system of five shipworm species (Bivalvia: Teredinidae).

    PubMed

    Betcher, Meghan A; Fung, Jennifer M; Han, Andrew W; O'Connor, Roberta; Seronay, Romell; Concepcion, Gisela P; Distel, Daniel L; Haygood, Margo G

    2012-01-01

    Marine bivalves of the family Teredinidae (shipworms) are voracious consumers of wood in marine environments. In several shipworm species, dense communities of intracellular bacterial endosymbionts have been observed within specialized cells (bacteriocytes) of the gills (ctenidia). These bacteria are proposed to contribute to digestion of wood by the host. While the microbes of shipworm gills have been studied extensively in several species, the abundance and distribution of microbes in the digestive system have not been adequately addressed. Here we use Fluorescence In-Situ Hybridization (FISH) and laser scanning confocal microscopy with 16S rRNA directed oligonucleotide probes targeting all domains, domains Bacteria and Archaea, and other taxonomic groups to examine the digestive microbiota of 17 specimens from 5 shipworm species (Bankia setacea, Lyrodus pedicellatus, Lyrodus massa, Lyrodus sp. and Teredo aff. triangularis). These data reveal that the caecum, a large sac-like appendage of the stomach that typically contains large quantities of wood particles and is considered the primary site of wood digestion, harbors only very sparse microbial populations. However, a significant number of bacterial cells were observed in fecal pellets within the intestines. These results suggest that due to low abundance, bacteria in the caecum may contribute little to lignocellulose degradation. In contrast, the comparatively high population density of bacteria in the intestine suggests a possible role for intestinal bacteria in the degradation of lignocellulose.

  4. Influence of the invasive Asian clam Corbicula fluminea (Bivalvia: Corbiculidae) on estuarine epibenthic assemblages

    NASA Astrophysics Data System (ADS)

    Ilarri, M. I.; Souza, A. T.; Antunes, C.; Guilhermino, L.; Sousa, R.

    2014-04-01

    One of the most widespread invasive alien species (IAS) in aquatic ecosystems is the Asian clam Corbicula fluminea. Several studies have shown that C. fluminea can cause large-scale changes in macrozoobenthic assemblages; however, very few attempted to investigate the effects of this IAS on mobile epibenthic species, such as fishes and crustaceans. In this context, the influence of C. fluminea on epibenthic species was investigated during one year by comparing the associated epibenthic fauna in three nearby sites of the Minho estuary (NW of the Iberian Peninsula), wherein the abiotic conditions are similar but the density of the Asian clam is highly different. From a total of 13 species, six were significantly influenced by C. fluminea; five responded positively, namely the brown shrimp Crangon crangon, the European eel Anguilla anguilla, the common goby Pomatoschistus microps, the brown trout Salmo trutta fario and the great pipefish Syngnathus acus, whereas the shore crab Carcinus maenas was negatively influenced. However, stomach contents analysis revealed that fish and crustacean species do not feed on C. fluminea, suggesting that this IAS is still not a large component of the diet of higher trophic levels in this estuarine ecosystem. Our results suggest that the structure provided by C. fluminea shells is likely to be one of the main factors responsible for the differences observed. C. fluminea physical structure seems to influence the epibenthic associated fauna, when found in densities higher than 1000 ind./m2, with sedentary small-bodied crustaceans and fishes being mainly attracted by the increasing in habitat complexity and consequent enhancement of heterogeneity and shelter availability.

  5. Ecotoxicological evaluation of tributyltin toxicity to the equilateral venus clam, Gomphina veneriformis (Bivalvia: Veneridae).

    PubMed

    Park, Kiyun; Kim, Rosa; Park, Jung Jun; Shin, Hyun Chool; Lee, Jung Sick; Cho, Hyeon Seo; Lee, Yeon Gyu; Kim, Jongkyu; Kwak, Inn-Sil

    2012-03-01

    Tributyltin (TBT) is the most common pesticide in marine and freshwater environments. To evaluate the potential ecological risk posed by TBT, we measured biological responses such as growth rate, gonad index, sex ratio, the percentage of intersex gonads, filtration rate, and gill abnormalities in the equilateral venus clam (Gomphina veneriformis). Additionally, the biochemical and molecular responses were evaluated in G. veneriformis exposed to various concentrations of TBT. The growth of G. veneriformis was significantly delayed in a dose-dependent manner after exposure to all tested TBT concentrations. After TBT was administered to G. veneriformis, the gonad index decreased and the sex balance was altered. The percentage of intersex gonads also increased significantly in treated females, whereas no intersex gonads were detected in the solvent control group. Additionally, intersex gonads were detected in male G. veneriformis specimens exposed to relatively high TBT concentrations (20 μg L⁻¹). The filtration rate was also reduced in a dose-dependent manner in TBT-exposed G. veneriformis. We also noted abnormal gill morphology in TBT-exposed G. veneriformis. Furthermore, increases in antioxidant enzyme activities were observed in TBT-exposed G. veneriformis clams, regardless of dosage. Vitellogenin gene expression also increased significantly in a dose-dependent manner in G. veneriformis exposed to TBT. These results provide valuable information regarding our understanding of the toxicology of TBT in G. veneriformis. Moreover, the responses of biological and molecular factors could be utilized as information for risk assessments and marine monitoring of TBT toxicity. Crown Copyright © 2011. Published by Elsevier Ltd. All rights reserved.

  6. Reproductive Cycle of Hard Clam, Meretrix lyrata Sowerby, 1851 (Bivalvia: Veneridae) from Sarawak, Malaysia.

    PubMed

    Hamli, Hadi; Idris, Mohd Hanafi; Rajaee, Amy Halimah; Kamal, Abu Hena Mustafa

    2015-12-01

    A study of the reproductive cycle of the hard clam, Meretrix lyrata, was documented based on histological observation and Gonad Index (GI). Samples were taken from estuarine waters of the Buntal River in Sarawak, Malaysia. The gonad of M. lyrata started to develop in September 2013. Gametogenesis continued to develop until the maturation and spawning stage from February to April 2014. The GI pattern for a one-year cycle showed a significant correlation with chlorophyll a. The corresponding GI with chlorophyll a suggested that the development of the reproductive cycle of M. lyrata required a high amount of food to increase gametogenesis.

  7. Reproductive Cycle of Hard Clam, Meretrix lyrata Sowerby, 1851 (Bivalvia: Veneridae) from Sarawak, Malaysia

    PubMed Central

    Hamli, Hadi; Idris, Mohd Hanafi; Rajaee, Amy Halimah; Kamal, Abu Hena Mustafa

    2015-01-01

    A study of the reproductive cycle of the hard clam, Meretrix lyrata, was documented based on histological observation and Gonad Index (GI). Samples were taken from estuarine waters of the Buntal River in Sarawak, Malaysia. The gonad of M. lyrata started to develop in September 2013. Gametogenesis continued to develop until the maturation and spawning stage from February to April 2014. The GI pattern for a one-year cycle showed a significant correlation with chlorophyll a. The corresponding GI with chlorophyll a suggested that the development of the reproductive cycle of M. lyrata required a high amount of food to increase gametogenesis. PMID:26868710

  8. Tissue Distribution and Elimination of Ciguatoxins in Tridacna maxima (Tridacnidae, Bivalvia) Fed Gambierdiscus polynesiensis.

    PubMed

    Roué, Mélanie; Darius, Hélène Taiana; Ung, André; Viallon, Jérôme; Sibat, Manoella; Hess, Philipp; Amzil, Zouher; Chinain, Mireille

    2018-05-10

    Ciguatera is a foodborne disease caused by the consumption of seafood contaminated with ciguatoxins (CTXs). Ciguatera-like poisoning events involving giant clams ( Tridacna maxima ) are reported occasionally from Pacific islands communities. The present study aimed at providing insights into CTXs tissue distribution and detoxification rate in giant clams exposed to toxic cells of Gambierdiscus polynesiensis , in the framework of seafood safety assessment. In a first experiment, three groups of tissue (viscera, flesh and mantle) were dissected from exposed individuals, and analyzed for their toxicity using the neuroblastoma cell-based assay (CBA-N2a) and liquid chromatography-tandem mass spectrometry (LC-MS/MS) analyses. The viscera, flesh, and mantle were shown to retain 65%, 25%, and 10% of the total toxin burden, respectively. All tissues reached levels above the safety limit recommended for human consumption, suggesting that evisceration alone, a practice widely used among local populations, is not enough to ensure seafood safety. In a second experiment, the toxin content in contaminated giant clams was followed at different time points (0, 2, 4, and 6 days post-exposure). Observations suggest that no toxin elimination is visible in T. maxima throughout 6 days of detoxification.

  9. Characteristics of a refuge for native freshwater mussels (Bivalvia: Unionidae) in Lake St. Clair

    USGS Publications Warehouse

    McGoldrick, D.J.; Metcalfe-Smith, J. L.; Arts, M.T.; Schloesser, D.W.; Newton, T.J.; Mackie, G.L.; Monroe, E.M.; Biberhofer, J.; Johnson, K.

    2009-01-01

    The Lake St. Clair delta (??? 100??km2) provides an important refuge for native freshwater mussels (Unionidae) wherein 22 of the ??? 35 historical species co-occur with invasive dreissenids. A total of 1875 live unionids representing 22 species were found during snorkeling surveys of 32 shallow (??? 1??m) sites throughout the delta. Richness and density of unionids and zebra mussel infestation rates varied among sites from 3 to 13 unionid species, 0.02 to 0.12 unionids/m2, and < 1 to 35 zebra mussels/unionid, respectively. Zebra mussel infestation of unionids in the delta appears to be mitigated by dominant offshore currents, which limit densities of zebra mussel veligers in nearshore compared to offshore waters (13,600 vs. 28,000/m3, respectively). Glycogen concentrations in the tissues of a common and widespread species in the delta (Lampsilis siliquoidea) suggest that zebra mussels may be adversely affecting physiological condition of unionids in a portion of the Lake St. Clair delta. Physiological condition and community structure of unionids within the delta may also be influenced by differences in food quantity and quality resulting from the uneven distribution of water flowing from the St. Clair River. The delta likely supports the largest living unionid community in the lower Great Lakes and includes several species that have been listed as Endangered or Threatened in Canada and/or the state of Michigan, making it an important refuge for the conservation of native unionids. Crown Copyright ?? 2009.

  10. Parasites of the mangrove mussel Mytella guyanensis (Bivalvia: Mytilidae) in Camamu Bay, Bahia, Brazil.

    PubMed

    Ceuta, L O; Boehs, G

    2012-08-01

    This contribution reports the parasites found in the mangrove mussel Mytella guyanensis in Camamu Bay, Bahia, Brazil. Samples were collected monthly from September 2006 through October 2007. A total of 460 individuals were collected, fixed in Davidson's solution, and processed by standard histological techniques, and the sections were stained with Harris hematoxylin and eosin (H&E). The water temperature ranged from 23.5 to 31.6 ºC, and the salinity from 25 to 37‰. Microscopic analysis showed Rickettsia-like organisms (RLOs), Nematopsis sp. (Apicomplexa), and Platyhelminthes, including a turbellarian, sporocysts of Bucephalus sp., metacercariae, and metacestodes of Tylocephalum sp. Parasites were observed mainly in the gills, mantle, and digestive gland. The prevalence of Nematopsis sp. was 100%, and in heavily infected mussels the tissues of the labial palps were damaged. RLOs occurred in high prevalence and intensity of infection in some periods. The digenean sporocysts showed moderate prevalence but high intensity of infection, and caused parasitic castration. In general, there was no significant spatial or temporal variation (p > 0.05) of the parasites, which is probably attributable to the small variations of temperature and salinity in the region.

  11. Morphofunctional study of the haemocytes of the bivalve mollusc Mytilus galloprovincialis with emphasis on the endolysosomal compartment.

    PubMed

    Cajaraville, M P; Pal, S G

    1995-10-01

    In the present work the haemocytes of mussels Mytilus galloprovincialis (Mollusca, Bivalvia) have been studied by light and electron microscopy in order to describe their main morphological features and to relate these to their roles in immune defence. The haemocytes belong to two definitive differentiated types, hyalinocytes and granulocytes. The former shows the presence of several fine pseudopodial protrusions, large nucleus with clumps of dense chromatin, scant cytoplasm, a well developed Golgi apparatus, lysosomes, several mitochondria (some with characteristic inclusions), coated pits and peripherally placed membrane-bound endocytic vesicles, considerable amounts of endoplasmic reticulum and ribosomes. The granulocytes generally possess an organelle-free ectoplasmic zone, numerous membrane-delimited dense granules of various types, coated pits and vesicles, endocytic and phagocytic vesicles, multivesicular bodies, several peroxisome-like organelles, mitochondria with inclusions, scant endoplasmic reticulum and small Golgi apparatus. These cells show the presence of few lipid droplets and variable amounts of glycogen particles. Some of the substructural features of the granules are documented here to indicate their probable biogenesis, growth and relationship with the endolysosomal compartment. In addition, in vitro phagocytosis experiments demonstrate that both hyalinocytes and granulocytes uptake latex and zymosan particles, granulocytes being much more active in phagocytosis than hyalinocytes.

  12. Composition and abundance of epibenthic-sledge catches in the South Polar Front of the Atlantic

    NASA Astrophysics Data System (ADS)

    Brandt, A.; Havermans, C.; Janussen, D.; Jörger, K. M.; Meyer-Löbbecke, A.; Schnurr, S.; Schüller, M.; Schwabe, E.; Brandão, S. N.; Würzberg, L.

    2014-10-01

    An epibenthic sledge (EBS) was deployed at seven different deep-sea stations along the South Polar Front of the Atlantic in order to explore the composition and abundance of macrofaunal organisms and to identify the most abundant taxa in this transition zone to the Southern Ocean. In total 3,130 specimens were sampled by means of the EBS on board of RV Polarstern during the expedition ANT-XXVIII/3 in the austral summer of 2012. Benthic and suprabenthic Crustacea occurred to be most frequent in the samples. Among those, copepods were by far most numerous, with 1,585 specimens followed by the peracarid taxa Isopoda (236 ind.), Amphipoda (103 ind.), Tanaidacea (78 ind.) and Cumacea (50 ind.). Annelida were represented by a high number of specimens belonging to different polychaete taxa (404 ind.). The molluscan fauna was clearly dominated by Bivalvia (255 ind.), followed in numbers of specimens by Gastropoda (47 ind.). The deep-sea benthos sampled along the Southern Polar Front occurred in surprisingly low abundances, contrasting the largely high surface productivity of the area. Numbers of specimens across different macrofaunal taxa and especially of peracarid crustaceans underscored by far those from South Ocean sites at higher latitudes in the Weddell Sea.

  13. Vertically oriented structure and its fracture behavior of the Indonesia white-pearl oyster.

    PubMed

    Chen, Guowei; Luo, Hongyun; Luo, Shunfei; Lin, Zhenying; Ma, Yue

    2017-02-01

    Structural calcites, aragonites, and the bonding organic network decide the growth, structure and mechanical properties of the mollusk bivalvia shell. Here, it was found out that the calcite prisms together with the coated organics construct another kind of 'brick and mortar' structure similar to the aragonite tablets. The calcite layer can be divided into three sublayers and direct evidences show that the calcite prisms are produced by two methods: nucleation and growing in the first sublayer; or fusing from the aragonites, which is quite different from some previous reports. The crystallographic orientation, micro hardness and crack propagations were tested and observed by XRD, micro harness tester, SEM and TEM. Submicron twin crystals were observed in the immature aragonite tablets. The fracture processes and the micro deformation of the aragonite tablets are detected by acoustic emission (AE) in the tensile tests, which gave the interpretation of the dynamical fracture processes: plastic deformation and fracture of the organics, and friction of the minerals at the first two stages; wear and fracture of the minerals at the third stage. Calcites and aragonites are combined and working together, like two layers of vertical 'brick and mortar's, ensuring the stable mechanical properties of the whole shell. Copyright © 2016 Elsevier Ltd. All rights reserved.

  14. A new cercaria and metacercaria of Acanthoparyphium (Echinostomatidae) found in an intertidal snail Zeacumantus subcarinatus (Batillaridae) from New Zealand.

    PubMed

    Martorelli, Sergio R; Poulin, Robert; Mouritsen, Kim N

    2006-09-01

    A new 23-collar-spined cercaria and metacercaria are described from intertidal molluscs of the coast of New Zealand. The new cercaria found emerging from the mud snails Zeacumantus subcarinatus (Sowerby) (Prosobranchia: Batillariidae) is characterized mainly by the number and arrangement of the cephalic glands, the size of the suckers, and the size and number of the collar spines. The cercaria encysts in the cockle Austrovenus stutchburyi (Wood) (Bivalvia: Veneridae) which lives in sympatry with the first intermediate host throughout New Zealand. Laboratory infections of cockles by cercariae from naturally infected snails resulted in metacercariae identical to those found in naturally infected cockles. The main features of the cercaria and metacercaria are the presence of a reniform collar with 23 spines, two pairs of small cephalic glands at the oral sucker level, another two pairs of much longer ones posterior to the pharynx, and the excretory vesicle Y-shaped with the main collecting canals extending to the anterior level of the ventral sucker. Each of the main collecting canals had 10-11 pairs of bilateral diverticula between the anterior edge of the ventral sucker and anterior body end. A brief discussion of its possible life cycle and ecology is also provided.

  15. Thiaminase activity in native freshwater mussels

    USGS Publications Warehouse

    Blakeslee, Carrie J.; Sweet, Stephanie; Galbraith, Heather S.; Honeyfield, Dale C.

    2015-01-01

    Thiamine (vitamin B1) deficiency in the Great Lakes has been attributed to elevated levels of thiaminase I enzyme activity in invasive prey species; however, few studies have investigated thiaminase activity in native prey species. Some of the highest levels of thiaminase activity have been measured in invasive dreissenid mussels with little understanding of background levels contributed by native freshwater mussels (Bivalvia: Unionidae). In this study, thiaminase activity was measured in two freshwater mussel species, Elliptio complanata and Strophitus undulatus, from the Delaware and Susquehanna River drainage basins located in north eastern United States. Thiaminase activity was also measured in gravid and non-gravid S. undulatus. Average thiaminase activity differed significantly between species (7.2 and 42.4 μmol/g/min, for E. complanata and S. undulatus respectively) with no differences observed between drainage basins. Gravid S. undulatus had significantly lower thiaminase activity (28.0 μmol/g/min) than non-gravid mussels (42.4 μmol/g/min). Our results suggest that a suite of factors may regulate thiaminase activity in freshwater mussels and that native freshwater mussel thiaminase activity is within the range observed for invasive dreissenids. These results add to our understanding of the complexities in identifying the ecological conditions that set the stage for thiamine deficiency.

  16. Interspecific Relationships in Benthic Assemblages of a Large Lowland River : Co-existence or Competition as a Result of Habitat Characteristics

    NASA Astrophysics Data System (ADS)

    Akopian, M.; Usseglio-Polatera, P.

    2005-05-01

    Macrobenthic assemblages of the lower, regulated and canalized Marne River (France) are dominated by several "exotic", recently introduced species. Arrival, installation and spread of such alien species were certainly promoted by (1) the close connection between French and other European river systems (Rhine, Danube), (2) the modification of natural river flow and benthic habitats. Both habitat characteristics (e.g. granulometric composition, organic content) and corresponding benthic assemblage structure were analysed to identify the substrate affinity of major taxa in the lower Marne River. The main aim of the study was to evaluate the possible biotic interactions (i.e. competition for food and/or space) among dominant taxa as function of habitat features and to predict the future development of newly established species, already known as potential invaders: Corbicula fluminea (Bivalvia), Hypania invalida (Polychaeta), Chelicorophium curvispinum (Amphipoda), etc. Most of the newly established species, coming from the same biogeographical area ("invasional meltdown" hypothesis?), are eurytopic, with high fecundity and large food spectrum. First results demonstrated the co-existence of such species in the Marne River. But the future ecological importance of these organisms in benthic assemblages of the river depends on their present population size, population dynamics, and ability to colonize bottom substrates.

  17. Colwellia and sulfur-oxidizing bacteria: An unusual dual symbiosis in a Terua mussel (Mytilidae: Bathymodiolinae) from whale falls in the Antilles arc

    NASA Astrophysics Data System (ADS)

    Duperron, Sébastien; Gros, Olivier

    2016-09-01

    Seven individuals of a single morphotype of mussels (Bivalvia: Mytilidae) were found attached to a naturally sunken whale intervertebral disk collected in Guadeloupe (Caribbean) at 800 m depth. These specimens resemble small Idas mussels which are found worldwide at cold seeps and hydrothermal vents, and typically harbor ectosymbiotic bacteria on their gills upon which they depend for nutrition. Based on multi-locus gene sequencing, these specimens appear to belong to a new species closely related to two species now included within the genus Terua. Unexpectedly, its closest relatives are found in the Pacific, questioning how this species has reached the Antilles arc. Based on marker gene sequence analysis, electron and fluorescence microscopy, Terua n. sp. harbors two distinct and abundant extracellular bacterial symbionts located between microvilli at the apical surface of host gill epithelial cells. One is a sulfur-oxidizing bacterium similar to the symbionts previously identified in several deep-sea mussels, while the other is related to Colwellia species, a group of cold-adapted heterotrophic bacteria able to degrade organic compounds. This study provides the first evidence for the existence of a dual symbiosis in mussels from whale fall ecosystems in the Caribbean. The evolutionary history of Terua n. sp. and potential role of its Colwellia symbionts are discussed.

  18. Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga

    USGS Publications Warehouse

    Bhaduri, Ritin; Valentich-Scott, Paul; Hilgers, Mark; Singh, Rajvir; Hickman, Mikaila; Lafferty, Kevin D.

    2017-01-01

    It is rare that an organism capable of independent or commensalistic existence can also become endoparasitic on a host. In this study, we documented a potential step toward parasitism in the commensal clam Kurtiella pedroana (Bivalvia: Galeommatoidea). Galeommatoideans are known commensals of various invertebrates, including crustaceans. Emerita analoga (Decapoda: Hippidae) is an abundant intertidal decapod inhabiting sandy beaches of the Pacific coast of North and South America. Crabs collected from Monterey Bay, California, were measured and examined externally and internally for associated molluscs. Out of the 520 crabs, 37 large female individuals harbored 49 bivalves (prevalence of 7.11% and mean intensity of 1.3). Forty-one ectocommensal clams were either inside the crab's branchial chambers or on their lateroventral surfaces, and were attached by byssal threads. Our key finding was eight clams that lacked byssal threads and were living in the hemocoel. These internal clams were significantly smaller than the ectocommensals. Because these internal clams lacked access to their normal food, we hypothesize they might have fed on their host's hemolymph as would a parasite. This clam species likely can't reproduce inside its host, implying that endoparasitism is a dead-end state for K. pedroana. Facultative parasitism in a free-living or an ectocommensal is uncommon and suggests a pathway to parasitism.

  19. Atypical feeding behavior of Long-tailed Ducks in the wake of a commercial fishing boat while clamming

    USGS Publications Warehouse

    Perry, Matthew; Osenton, Peter C.; White, Timothy P.

    2017-01-01

    A foraging group of Clangula hyemalis (Long-tailed Duck) was observed on 10 February 2010 diving behind a commercial boat that was clamming near Monomoy Island, Nantucket Sound, MA. We used a shotgun to collect 9 of the ducks, and our analyses of gizzard and gullet (esophagus and proventriculus) revealed 37 food items in the gizzard and 16 in the gullet. Mollusca were the dominant food in the gizzard (49%), whereas Crustacea were dominant in the gullet (57%). Crustacea were the second most important food in the gizzard (38%), whereas Mollusca were the second most important food in the gullet (31%). Relatively high volumes of the Amphipoda Caprella sp. (skeleton shrimp) and the Decopoda Crangon septemspinosa (Sand Shrimp) were recorded in the gullet and gizzard. Ensis directus (Atlantic Jackknife Clam) formed the greatest volume of Mollusca in the gizzard (15%) and in the gullet (15%). Long-tailed Ducks had fed on this Bivalvia and several other species of Mollusca that had no shell or broken shell when consumed. Many of the food organisms were apparently dislodged and some damaged by the clamming operation creating an opportunistic feeding strategy for the Long-tailed Ducks.

  20. Seasonal variation in biomarker responses of Donax trunculus from the Gulf of Annaba (Algeria): Implication of metal accumulation in sediments

    NASA Astrophysics Data System (ADS)

    Amira, Akila; Merad, Isma; Almeida, C. Marisa R.; Guimarães, Laura; Soltani, Nourredine

    2018-05-01

    The aim of the present study was to test biomarker responses in an edible mollusk, Donax trunculus L. (Mollusca, Bivalvia) associated with environmental pollution in the Gulf of Annaba (northeastern Algeria). The biomarkers selected were glutathione S-transferase (GST), acetylcholinesterase (AChE) and metallothioneins (MTs). Samples were collected seasonally (September 2014, and January, April and July 2015) from two sites located over the Gulf of Annaba: El Battah and Sidi Salem. The results obtained reveal that autumn and winter were the two seasons that show an increase in GST activity, an inhibition of AChE activity and a high rate of MT. In addition, a decrease in AChE activity, an increase in both GST activity and MT levels in D. Trunculus collected from Sidi Salem in comparison with those of El Battah were observed. The biomarker responses at the Sidi Salem site reflect the presence of certain pro-oxidative compounds such as metals (Cd, Cu, Pb, Zn, Mn and Fe) determined in sediments in winter (January) 2015. Moreover, metal concentrations, except Fe, were higher at Sidi Salem than at El Battah. Overall, the Gulf of Annaba remains contaminated by heavy metal. However, this metallic contamination is relatively low and the risks for local population via this edible species were also low.

  1. Modeling bivalve diversification: the effect of interaction on a macroevolutionary system

    NASA Technical Reports Server (NTRS)

    Miller, A. I.; Sepkoski, J. J. Jr; Sepkoski JJ, J. r. (Principal Investigator)

    1988-01-01

    The global diversification of the class Bivalvia has historically received two conflicting interpretations. One is that a major upturn in diversification was associated with, and a consequence of, the Lake Permian mass extinction. The other is that mass extinctions have had little influence and that bivalves have experienced slow but nearly steady exponential diversification through most of their history, unaffected by interactions with other clades. We find that the most likely explanation lies between these two interpretations. Through most of the Phanerozoic, the diversity of bivalves did indeed exhibit slow growth, which was not substantially altered by mass extinctions. However, the presence of "hyperexponential bursts" in diversification during the initial Ordovician radiation and following the Late Permian and Late Cretaceous mass extinctions suggests a more complex history in which a higher characteristic diversification rate was dampened through most of the Phanerozoic. The observed pattern can be accounted for with a two-phase coupled (i.e., interactive) logistic model, where one phase is treated as the "bivalves" and the other phase is treated as a hypothetical group of clades with which the "bivalves" might have interacted. Results of this analysis suggest that interactions with other taxa have substantially affected bivalve global diversity through the Phanerozoic.

  2. Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

    PubMed Central

    Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

    2016-01-01

    Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe–metazoan interactions. PMID:27703692

  3. Trends in the sand: Directional evolution in the shell shape of recessing scallops (Bivalvia: Pectinidae).

    PubMed

    Sherratt, Emma; Alejandrino, Alvin; Kraemer, Andrew C; Serb, Jeanne M; Adams, Dean C

    2016-09-01

    Directional evolution is one of the most compelling evolutionary patterns observed in macroevolution. Yet, despite its importance, detecting such trends in multivariate data remains a challenge. In this study, we evaluate multivariate evolution of shell shape in 93 bivalved scallop species, combining geometric morphometrics and phylogenetic comparative methods. Phylomorphospace visualization described the history of morphological diversification in the group; revealing that taxa with a recessing life habit were the most distinctive in shell shape, and appeared to display a directional trend. To evaluate this hypothesis empirically, we extended existing methods by characterizing the mean directional evolution in phylomorphospace for recessing scallops. We then compared this pattern to what was expected under several alternative evolutionary scenarios using phylogenetic simulations. The observed pattern did not fall within the distribution obtained under multivariate Brownian motion, enabling us to reject this evolutionary scenario. By contrast, the observed pattern was more similar to, and fell within, the distribution obtained from simulations using Brownian motion combined with a directional trend. Thus, the observed data are consistent with a pattern of directional evolution for this lineage of recessing scallops. We discuss this putative directional evolutionary trend in terms of its potential adaptive role in exploiting novel habitats. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

  4. Interactive effects of temperature and food availability on the growth of Arctica islandica (Bivalvia) juveniles.

    PubMed

    Ballesta-Artero, Irene; Janssen, Reneé; van der Meer, Jaap; Witbaard, Rob

    2018-02-01

    The interest in Arctica islandica growth biology has recently increased due to the widespread use of its shell as a bioarchive. Although temperature and food availability are considered key factors in its growth, their combined influence has not been studied so far under laboratory conditions. We tested the interactive effect of temperature and food availability on the shell and tissue growth of A. islandica juveniles (9-15 mm in height) in a multi-factorial experiment with four food levels (no food, low, medium, and high) and three different temperatures (3, 8, 13 °C). Shell and tissue growth were observed in all treatments, with significant differences occurring only among food levels (2-way ANOVA; P-value < 0.05). Siphon activity (% open siphons), however, was affected by temperature, food, and the interaction between them (2-way ANOVA; P-value < 0.05). Siphon observations, as indication of feeding activities, played a key role to better understand the growth variation between individuals. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Spawning, fertilization, and larval development of Potamocorbula amurensis (Mollusca: Bivalvia) from San Francisco Bay, California

    USGS Publications Warehouse

    Nicolini, M.H.; Penry, D.L.

    2000-01-01

    In Potamocorbula amurensis time for development to the straight-hinge larval stage is 48 hr at 15??C. Potamocorbula amurensis settles at a shell length of approximately 135 ??m 17 to 19 days after fertilization. Our observations of timing of larval devdlopment in P. amurensis support the hypothesis of earlier workers that its route of initial introduction to San Francisco Bay was as veliger larvae transported in ballast water by trans-Pacific cargo ships. The length of the larval period of P. amurensis relative to water mass residence times in San Francisco Bay suggests that it is sufficient to allow substantial dispersal from North Bay to South Bay populations in concordance with previous observations that genetic differentiation among populations of P. amurensis in San Francisco Bay is low. Potamocorbula amurensis is markedly euryhaline at all stages of development. Spawning and fertilization can occur at salinities from 5 to 25 psu, and eggs and sperms can each tolerance at least a 10-psu step increase or decrease in salinity. Embryos that are 2 hr old can tolerate the same range of salinities from (10 to 30 psu), and by the time they are 24 hr old they can tolerate the same range of salinities (2 to 30 psu) that adult clams can. The ability of P. amurensis larvae to tolerate substantial step changes in salinity suggests a strong potential to survive incomplete oceanic exchanges of ballast water and subsequent discharge into receiving waters across a broad range of salinities.

  6. Respiration Strategies Utilized by the Gill Endosymbiont from the Host Lucinid Codakia orbicularis (Bivalvia: Lucinidae)

    PubMed Central

    Duplessis, Melinda R.; Ziebis, Wiebke; Gros, Olivier; Caro, Audrey; Robidart, Julie; Felbeck, Horst

    2004-01-01

    The large tropical lucinid clam Codakia orbicularis has a symbiotic relationship with intracellular, sulfide-oxidizing chemoautotrophic bacteria. The respiration strategies utilized by the symbiont were explored using integrative techniques on mechanically purified symbionts and intact clam-symbiont associations along with habitat analysis. Previous work on a related symbiont species found in the host lucinid Lucinoma aequizonata showed that the symbionts obligately used nitrate as an electron acceptor, even under oxygenated conditions. In contrast, the symbionts of C. orbicularis use oxygen as the primary electron acceptor while evidence for nitrate respiration was lacking. Direct measurements obtained by using microelectrodes in purified symbiont suspensions showed that the symbionts consumed oxygen; this intracellular respiration was confirmed by using the redox dye CTC (5-cyano-2,3-ditolyl tetrazolium chloride). In the few intact chemosymbioses tested in previous studies, hydrogen sulfide production was shown to occur when the animal-symbiont association was exposed to anoxia and elemental sulfur stored in the thioautotrophic symbionts was proposed to serve as an electron sink in the absence of oxygen and nitrate. However, this is the first study to show by direct measurements using sulfide microelectrodes in enriched symbiont suspensions that the symbionts are the actual source of sulfide under anoxic conditions. PMID:15240294

  7. BIOMARKER RESPONSES IN MACOMA NASUTA (BIVALVIA) EXPOSED TO SEDIMENTS FROM NORTHERN SAN FRANCISCO BAY. (R826940)

    EPA Science Inventory

    Abstract

    Our study investigates biomarker responses and survival of Macoma nasuta exposed to sediments collected from six locations in northern San Francisco Bay. Biomarkers analyzed were stress proteins (hsp70) in gill, mantle and digestive gland, lysosomal mem...

  8. THE INFLUENCE OF SALINITY ON THE HEAT-SHOCK PROTEIN RESPONSE OF POTAMOCORBULA AMURENSIS (BIVALVIA). (R826940)

    EPA Science Inventory

    Abstract

    For biomarkers to be useful in assessing anthropogenic impacts in field studies involving aquatic organisms, they should not be affected by naturally occurring changes in environmental parameters such as salinity. This is especially important in estuarine envi...

  9. Morphological differences in Macoma balthica (Bivalvia, Tellinacea) from a Dutch and three southeastern United States estuaries

    NASA Astrophysics Data System (ADS)

    Kamermans, Pauline; Van der Veer, Henk W.; Witte, Johannes IJ.; Adriaans, Ewout J.

    1999-05-01

    Field collections of the bivalve Macoma balthica in the Dutch Wadden Sea and three southeastern United States estuaries revealed morphological differences between populations of the two sides of the Atlantic Ocean. Individuals of the same age showed much larger shell lengths at the American stations. In addition, bivalves of the same body weight had higher siphon weights at the American stations than at the Dutch stations. This difference in siphon size was related to their burying depths. The American population, which invested more in heavier siphons, was able to burrow much deeper into the sediment (up to 30 cm). Deep burial may be an adaptation to avoid exposure to the high southern temperatures. Furthermore, it may serve as a refuge from blue crab predation. The results of our comparison between the southern American population and the European support the suggestion that populations of M. balthica living in these two regions should be considered separate and sibling species.

  10. Phylogeny and evolutionary radiation of the marine mussels (Bivalvia: Mytilidae) based on mitochondrial and nuclear genes.

    PubMed

    Liu, Jun; Liu, Helu; Zhang, Haibin

    2018-04-22

    The marine mussels (Mytilidae) are distributed in the oceans worldwide and occupy various habitats with diverse life styles. However, their taxonomy and phylogeny remain unclear from genus to family level due to equivocal morphological and anatomical characters among some taxa. In this study, we inferred the deep phylogenetic relationships among 42 mytiloid species, 19 genera, and five subfamilies of the extant marine mussels by using two mitochondrial (COI and 16S rRNA) and three nuclear (18S and 28S rRNA, and histone H3) genes. Phylogeny was reconstructed with a combination of five genes using Bayesian inference and maximum likelihood method, and divergence time was estimated for the major nodes using a relaxed clock model with three fossil calibrations. Phylogenetic trees revealed two major clades (Clades 1 and 2). In Clade 1, the deep-sea mussels (subfamily Bathymodiolinae) were sister to subfamily Modiolinae (represented by Modiolus), and then was clustered with Leiosolenus (subfamily Lithophaginae). Clade 2 comprised Lithophaga (Lithophaginae) and subfamily Mytilinae. Additionally, a Modiolus species and Musculus senhousia (subfamily Crenellinae) were positioned within the subfamily Mytilinae. The phylogenetic results strongly indicated monophyly of Mytilidae and Bathymodiolinae, polyphyly of Modiolinae and Lithophaginae, and paraphyly of Mytilinae. Divergence time estimation showed an ancient and gradual divergence in most mussel groups, whereas the deep-sea mussels originated recently and diverged rapidly during the Paleogene. The present study provides new insight into the evolutionary history of the marine mussels, and supports taxonomic revision for this important bivalve group. Copyright © 2018 Elsevier Inc. All rights reserved.

  11. Tissue-specific accumulation of cadmium in subcellular compartments of eastern oysters Crassostrea virginica Gmelin (Bivalvia: Ostreidae).

    PubMed

    Sokolova, I M; Ringwood, A H; Johnson, C

    2005-09-10

    Cadmium distribution was studied in different subcellular fractions of gill and hepatopancreas tissues of eastern oysters Crassostrea virginica. Oysters were exposed for up to 21 days to low sublethal Cd concentrations (25 microg L(-1)). Gill and hepatopancreas tissues were sampled and divided into organelle fractions and cytosol by differential centrifugation. Organelle content of different fractions was verified by activities of marker enzymes, citrate synthase and acid phosphatase for mitochondria and lysosomes, respectively. In both tissue types, there was a significant accumulation of cadmium in cytosol reaching 230-350 ng mg(-1) protein. Among organelles, mitochondria were the main target for Cd bioaccumulation in gills (250-300 ng mg(-1) protein), whereas in hepatopancreas tissues, the highest cadmium accumulation occurred in lysosomes (90-94 ng mg(-1) protein). Although 75-83% of total cadmium burden was associated with the cytosol reflecting high volume fraction of this compartment, Cd concentrations in organelle fractions reached levels that could cause dysfunction of mitochondria and lysosomes. Organ- and organelle-specific patterns of cadmium bioaccumulation support our previous in vivo studies, which showed adverse effects of cadmium exposures on mitochondrial oxidation in gills and on the lysosomal system of hepatopancreas. This may have important implications for the development of biomarkers of effect for heavy metals and for understanding the mechanisms of toxic effects of metals.

  12. Sex Ratio and Sex Reversal in Two-year-old Class of Oyster, Crassostrea gigas (Bivalvia: Ostreidae)

    PubMed Central

    Park, Jung Jun; Kim, Hyejin; Kang, Seung Wan; An, Cheul Min; Lee, Sung-Ho; Gye, Myung Chan; Lee, Jung Sick

    2012-01-01

    The sex ratio (F:M) in the same population of oyster, Crassostrea gigas at the commencement of the study (2007) was 1:1.0, but changed to 1:2.8 by the end of the study (2008). The sex reversal rate in two-year-old oysters was 40.2%. Specifically, female to male sex reversal rate was 66.1%, which is higher than the male to female sex reversal rate of 21.1%. The sex reversal pattern of C. gigas appears to go from male⇒female⇒male, and as such is determined to be rhythmical hermaphroditism. PMID:25949114

  13. [Individual growth modeling of the penshell Atrina maura (Bivalvia: Pinnidae) using a multi model inference approach].

    PubMed

    Aragón-Noriega, Eugenio Alberto

    2013-09-01

    Growth models of marine animals, for fisheries and/or aquaculture purposes, are based on the popular von Bertalanffy model. This tool is mostly used because its parameters are used to evaluate other fisheries models, such as yield per recruit; nevertheless, there are other alternatives (such as Gompertz, Logistic, Schnute) not yet used by fishery scientists, that may result useful depending on the studied species. The penshell Atrina maura, has been studied for fisheries or aquaculture supplies, but its individual growth has not yet been studied before. The aim of this study was to model the absolute growth of the penshell A. maura using length-age data. For this, five models were assessed to obtain growth parameters: von Bertalanffy, Gompertz, Logistic, Schnute case 1 and Schnute and Richards. The criterion used to select the best models was the Akaike information criterion, as well as the residual squared sum and R2 adjusted. To get the average asymptotic length, the multi model inference approach was used. According to Akaike information criteria, the Gompertz model better described the absolute growth of A. maura. Following the multi model inference approach the average asymptotic shell length was 218.9 mm (IC 212.3-225.5) of shell length. I concluded that the use of the multi model approach and the Akaike information criteria represented the most robust method for growth parameter estimation of A. maura and the von Bertalanffy growth model should not be selected a priori as the true model to obtain the absolute growth in bivalve mollusks like in the studied species in this paper.

  14. Temporal dynamics of amino and fatty acid composition in the razor clam Ensis siliqua (Mollusca: Bivalvia)

    NASA Astrophysics Data System (ADS)

    Baptista, Miguel; Repolho, Tiago; Maulvault, Ana Luísa; Lopes, Vanessa M.; Narciso, Luis; Marques, António; Bandarra, Narcisa; Rosa, Rui

    2014-12-01

    Few studies have been conducted on the temporal dynamics of both amino acid (AA) and fatty acid (FA) profiles in marine bivalves. We investigated the seasonal variation of these compounds in the pod razor clam Ensis siliqua in relation to food availability, salinity, water temperature and reproductive cycle. AA content varied between 46.94 and 54.67 % dry weight (DW), and the AAs found in greater quantity were glutamic acid, glycine and aspartic acid. FA content varied between 34.02 and 87.94 mg g-1 DW and the FAs found in greater quantity were 16:0 and 22:6 n-3. Seasonal trends were observed for AAs and FAs. FAs increased with gametogenesis and decreased with spawning while AA content increased throughout spawning. The effect of increasing temperature and high food availability during the spawning season masked the loss of AAs resulting from gamete release. Still, a comparatively greater increase in the contents of glutamic acid and leucine with spawning indicate their possible involvement in a post-spawning gonad recovery mechanism. A post-spawning decrease in 14:0, 16:0, 16:1 n-7, 18:1 n-7 and 18:1 n-9 is indicative of the importance of these FAs in bivalve eggs. An increase in 18:3 n-3, 18:4 n-3, 20:1 n-9 and 20:2 n-6 during gametogenesis suggests their involvement in oocyte maturation. The FA 22:4 n-6, while increasing with spawning, appears to play a role in post-spawning gonad recovery. Salinity did not have an effect on the AA composition. None of the environmental parameters measured had an effect on FA composition.

  15. A revised list of the freshwater mussels (Mollusca: Bivalvia: Unionida) of the United States and Canada

    USGS Publications Warehouse

    Williams, James D.; Bogan, Arthur E.; Butler, Robert S.; Cummings, Kevin S.; Garner, Jeffrey T.; Harris, John L.; Johnson, Nathan A.; Watters, G. Thomas

    2017-01-01

    We present a revised list of freshwater mussels (order Unionida, families Margaritiferidae and Unionidae) of the United States and Canada, incorporating changes in nomenclature and systematic taxonomy since publication of the most recent checklist in 1998. We recognize a total of 298 species in 55 genera in the families Margaritiferidae (one genus, five species) and Unionidae (54 genera, 293 species). We propose one change in the Margaritiferidae: the placement of the formerly monotypic genus Cumberlandia in the synonymy of Margaritifera. In the Unionidae, we recognize three new genera, elevate four genera from synonymy, and place three previously recognized genera in synonymy. We recognize for the first time two species (one native and one nonindigenous) in the Asian genus Sinanodonta as occurring in North America. We recognize four new species and one subspecies and elevate 21 species from synonymy. We elevate 10 subspecies to species status and no longer recognize four subspecies. We change common names for five taxa, correct spelling for eight species, and correct the date of publication of original descriptions for four species.

  16. Discovery of chemoautotrophic symbiosis in the giant shipworm Kuphus polythalamia (Bivalvia: Teredinidae) extends wooden-steps theory.

    PubMed

    Distel, Daniel L; Altamia, Marvin A; Lin, Zhenjian; Shipway, J Reuben; Han, Andrew; Forteza, Imelda; Antemano, Rowena; Limbaco, Ma Gwen J Peñaflor; Tebo, Alison G; Dechavez, Rande; Albano, Julie; Rosenberg, Gary; Concepcion, Gisela P; Schmidt, Eric W; Haygood, Margo G

    2017-05-02

    The "wooden-steps" hypothesis [Distel DL, et al. (2000) Nature 403:725-726] proposed that large chemosynthetic mussels found at deep-sea hydrothermal vents descend from much smaller species associated with sunken wood and other organic deposits, and that the endosymbionts of these progenitors made use of hydrogen sulfide from biogenic sources (e.g., decaying wood) rather than from vent fluids. Here, we show that wood has served not only as a stepping stone between habitats but also as a bridge between heterotrophic and chemoautotrophic symbiosis for the giant mud-boring bivalve Kuphus polythalamia This rare and enigmatic species, which achieves the greatest length of any extant bivalve, is the only described member of the wood-boring bivalve family Teredinidae (shipworms) that burrows in marine sediments rather than wood. We show that K. polythalamia harbors sulfur-oxidizing chemoautotrophic (thioautotrophic) bacteria instead of the cellulolytic symbionts that allow other shipworm species to consume wood as food. The characteristics of its symbionts, its phylogenetic position within Teredinidae, the reduction of its digestive system by comparison with other family members, and the loss of morphological features associated with wood digestion indicate that K. polythalamia is a chemoautotrophic bivalve descended from wood-feeding (xylotrophic) ancestors. This is an example in which a chemoautotrophic endosymbiosis arose by displacement of an ancestral heterotrophic symbiosis and a report of pure culture of a thioautotrophic endosymbiont.

  17. Discovery of chemoautotrophic symbiosis in the giant shipworm Kuphus polythalamia (Bivalvia: Teredinidae) extends wooden-steps theory

    PubMed Central

    Altamia, Marvin A.; Lin, Zhenjian; Shipway, J. Reuben; Han, Andrew; Forteza, Imelda; Antemano, Rowena; Limbaco, Ma. Gwen J. Peñaflor; Dechavez, Rande; Albano, Julie; Rosenberg, Gary; Concepcion, Gisela P.; Schmidt, Eric W.; Haygood, Margo G.

    2017-01-01

    The “wooden-steps” hypothesis [Distel DL, et al. (2000) Nature 403:725–726] proposed that large chemosynthetic mussels found at deep-sea hydrothermal vents descend from much smaller species associated with sunken wood and other organic deposits, and that the endosymbionts of these progenitors made use of hydrogen sulfide from biogenic sources (e.g., decaying wood) rather than from vent fluids. Here, we show that wood has served not only as a stepping stone between habitats but also as a bridge between heterotrophic and chemoautotrophic symbiosis for the giant mud-boring bivalve Kuphus polythalamia. This rare and enigmatic species, which achieves the greatest length of any extant bivalve, is the only described member of the wood-boring bivalve family Teredinidae (shipworms) that burrows in marine sediments rather than wood. We show that K. polythalamia harbors sulfur-oxidizing chemoautotrophic (thioautotrophic) bacteria instead of the cellulolytic symbionts that allow other shipworm species to consume wood as food. The characteristics of its symbionts, its phylogenetic position within Teredinidae, the reduction of its digestive system by comparison with other family members, and the loss of morphological features associated with wood digestion indicate that K. polythalamia is a chemoautotrophic bivalve descended from wood-feeding (xylotrophic) ancestors. This is an example in which a chemoautotrophic endosymbiosis arose by displacement of an ancestral heterotrophic symbiosis and a report of pure culture of a thioautotrophic endosymbiont. PMID:28416684

  18. Epibiotic relationships on Zygochlamys patagonica (Mollusca, Bivalvia, Pectinidae) increase biodiversity in a submarine canyon in Argentina

    NASA Astrophysics Data System (ADS)

    Schejter, Laura; López Gappa, Juan; Bremec, Claudia Silvia

    2014-06-01

    The continental slope of the southern SW Atlantic Ocean has many distinguishable deep submarine canyons, varying in depth and extension. The benthic fauna within one of them, detected in April 2005 by means of a multibeam SIMRAD EM1002 sonar, and located at 43°35‧S to 59°33‧W, 325 m depth, was studied to discuss faunal affinities with the neighbouring Patagonian scallop fishing grounds located at upper slope depths. In order to add faunal information to the previous general study, we studied the epibiotic species settled on Patagonian scallops (the dominant species in the area) collected in the reference sampling site using a 2.5-m mouth-opening dredge, 10 mm mesh size. We sampled 103 scallops with shell heights between 22 and 69 mm; epibionts were recorded on both valves. We found 53 epibiotic taxa, which were most conspicuous on the upper valve. Bryozoa was the most diverse group (34 species) while Polychaeta was the most abundant group, recorded on 94% of the scallops. Stylasteridae (2 species) and Clavulariidae (Cnidaria) conform newly recorded epibionts on Z. patagonica and the sponge Tedania (Tedaniopsis) infundibuliformis also represents a new record for the SW Atlantic Ocean.

  19. Composition of macrobenthos in the Bakkhali channel system, Cox's Bazar with notes on soil parameter.

    PubMed

    Abu Hena, M K; Kohinoor, S M S; Siddique, M A M; Ismail, J; Idris, M H; Amin, S M N

    2012-07-01

    Macrobenthos in coastal environment that play a significant role in the food web. It could also use as a good indicator of aquatic ecosystem health. The abundance and composition of macrobenthos in Bakkhali channel system, Cox's Bazar were conducted in relation to the soil parameters. Samples were collected using Ekman Berge bottom grab from five different stations of Bakkhali channel. Macrobenthos were comprised of five major groups namely Polychaeta (9.96-30.31%), Oligochaeta (3.68-59.707%), Crustacea (0.02-58.40%), Bivalvia (1.40-82.09%) and Gastropoda (0.08-4.25%). Total number of macrobenthos was higher at station I (9000 individuals m(-2)) and station II (8517 individuals m(-2)) compared to other stations. Shannon diversity index among the stations ranged from 0.65-1.04. Soil pH and soil moisture ranged from 6.1-6.4 and 23.44-31.29%, respectively. The highest organic carbon concentration was observed at station I (2.11%) and lowest at station III (1.40%). Maximum fraction of sand by weight was found at stations II (81.88%) and III (87.88) while the highest fraction of clay (21.52%) and silt (8.0%) were recorded in station I. It was observed that benthic bivalves were positively correlated (r = 0.891, p > 0.05) with silt fraction of the sediments.

  20. Eco-environmental impact assessment of pre-leisure beach nourishment on the benthic invertebrate community at Anping coast

    NASA Astrophysics Data System (ADS)

    Shih, Chun-Han; Kuo, Yi-Yu; Chu, Ta-Jen; Chou, Wen-Chieh; Chang, Wei-Tse; Lee, Ying-Chou

    2011-06-01

    In recent years, owing to global warming and the rising sea levels, beach nourishment and groin building have been increasingly employed to protect coastal land from shoreline erosion. These actions may degrade beach habitats and reduce biomass and invertebrate density at sites where they were employed. We conducted an eco-environmental evaluation at the Anping artificial beach-nourishment project area. At this site, sand piles within a semi-enclosed spur groin have been enforced by use of eco-engineering concepts since 2003. Four sampling sites were monitored during the study period from July 2002 to September 2008. The environmental impact assessment and biological investigations that we conducted are presented here. The results from this study indicate that both biotic (number of species, number of individual organisms, and Shannon-Wiener diversity) and abiotic parameters (suspended solids, biological oxygen demand, chemical oxygen demand, dissolved inorganic nitrogen, dissolved inorganic phosphorus, total phosphorus, total organic carbon, median diameter, and water content) showed significant differences before and after beach engineering construction. Biological conditions became worse in the beginning stages of the engineering but improved after the restoration work completion. This study reveals that the composition of benthic invertebrates changed over the study period, and two groups of organisms, Bivalvia and Gastropoda, seemed to be particularly suitable to this habitat after the semi-enclosed artificial structures completion.

  1. Diet shifts of lesser scaup are consistent with the spring condition hypothesis

    USGS Publications Warehouse

    Anteau, M.J.; Afton, A.D.

    2006-01-01

    We compared diets of lesser scaup (Aythya affinis (Eyton, 1838)) in the springs of 2000 and 2001 to those reported in the 1970s and the 1980s to determine whether forage quality has declined as predicted by the spring condition hypothesis. In Minnesota, we found that the current aggregate percentage of Amphipoda (an important food item) in lesser scaup diets was 94% lower than that reported from the same locations in the 1980s. Current mean individual prey mass of Amphipoda and Bivalvia in Minnesota were 86.6% and 85.1% lower than historical levels, respectively. In Manitoba, current aggregate percentages of Trichoptera and Chaoboridae in lesser scaup diets (1% and 0%, respectively) were lower than those reported from the same location in the 1970s (14% and 2%, respectively), whereas the percentage of Chironomidae (40%) was higher than that of historical levels (19%). Current mean individual prey mass of all insects, seeds, Chironomidae, and Zygoptera in Manitoba were 63.5%, 65.4%, 44.1%, and 44.9% lower than those of historical levels, respectively. The observed dietary shift from Amphipoda to less nutritious prey in Minnesota, coupled with lower mean individual prey mass in both locations, likely constitutes lower forage quality in lesser scaup diets, which is consistent with the spring condition hypothesis. 

  2. Contrasting responses of functional diversity to major losses in taxonomic diversity.

    PubMed

    Edie, Stewart M; Jablonski, David; Valentine, James W

    2018-01-23

    Taxonomic diversity of benthic marine invertebrate shelf species declines at present by nearly an order of magnitude from the tropics to the poles in each hemisphere along the latitudinal diversity gradient (LDG), most steeply along the western Pacific where shallow-sea diversity is at its tropical maximum. In the Bivalvia, a model system for macroevolution and macroecology, this taxonomic trend is accompanied by a decline in the number of functional groups and an increase in the evenness of taxa distributed among those groups, with maximum functional evenness (FE) in polar waters of both hemispheres. In contrast, analyses of this model system across the two era-defining events of the Phanerozoic, the Permian-Triassic and Cretaceous-Paleogene mass extinctions, show only minor declines in functional richness despite high extinction intensities, resulting in a rise in FE owing to the persistence of functional groups. We hypothesize that the spatial decline of taxonomic diversity and increase in FE along the present-day LDG primarily reflect diversity-dependent factors, whereas retention of almost all functional groups through the two mass extinctions suggests the operation of diversity-independent factors. Comparative analyses of different aspects of biodiversity thus reveal strongly contrasting biological consequences of similarly severe declines in taxonomic diversity and can help predict the consequences for functional diversity among different drivers of past, present, and future biodiversity loss.

  3. Effects of human trampling on a rocky shore fauna on the Sao Paulo coast, southeastern Brazil.

    PubMed

    Ferreira, M N; Rosso, S

    2009-11-01

    Increased tourist activity in coastal regions demands management strategies to reduce impacts on rocky shores. The highly populated coastal areas in southeastern Brazil are an example of degradation caused by development of industry and tourism. Among different shore impacts, trampling has been intensively studied, and may represent a significant source of stress for intertidal fauna. A randomised blocks design was applied to experimentally study the effects of two different trampling intensities on richness, diversity, density and biomass of the rocky shore fauna of Obuseiro beach, Guarujá, southeastern Brazil. Blocks were distributed in two portions of the intertidal zone, dominated respectively by Chthamalus bisinuatus (Cirripedia) and Isognomon bicolor (Bivalvia). Blocks were trampled over three months, simulating the vacation period in Brazil and were monitored for the following nine months. Results indicate that Chthamalus bisinuatus is vulnerable to trampling impacts. Richness, diversity and turn-over index tended to be higher in trampled plots four months after trampling ceased. In general, results agree with previous trampling studies, suggesting that even low intensities of trampling may cause some impact on intertidal communities. Management strategies should include isolation of sensitive areas, construction of boardwalks, visitor education and monitoring programmes. In Brazil, additional data obtained from experimental studies are necessary in order to achieve a better understanding of trampling impacts on rocky shore communities.

  4. Tolerance values of benthic macroinvertebrates for stream biomonitoring: assessment of assumptions underlying scoring systems worldwide.

    PubMed

    Chang, Feng-Hsun; Lawrence, Justin E; Rios-Touma, Blanca; Resh, Vincent H

    2014-04-01

    Tolerance values (TVs) based on benthic macroinvertebrates are one of the most widely used tools for monitoring the biological impacts of water pollution, particularly in streams and rivers. We compiled TVs of benthic macroinvertebrates from 29 regions around the world to test 11 basic assumptions about pollution tolerance, that: (1) Arthropoda are < tolerant than non-Arthropoda; (2) Insecta < non-Insecta; (3) non-Oligochaeta < Oligochaeta; (4) other macroinvertebrates < Oligochaeta + Chironomidae; (5) other macroinvertebrate taxa < Isopoda + Gastropoda + Hirudinea; (6) Ephemeroptera + Plecoptera + Trichoptera (EPT) < Odonata + Coleoptera + Heteroptera (OCH); (7) EPT < non-EPT insects; (8) Diptera < Insecta; (9) Bivalvia < Gastropoda; (10) Baetidae < other Ephemeroptera; and (11) Hydropsychidae < other Trichoptera. We found that the first eight of these 11 assumptions were supported despite regional variability. In addition, we examined the effect of Best Professional Judgment (BPJ) and non-independence of TVs among countries by performing all analyses using subsets of the original dataset. These subsets included a group based on those systems using TVs that were derived from techniques other than BPJ, and groups based on methods used for TV assignment. The results obtained from these subsets and the entire dataset are similar. We also made seven a priori hypotheses about the regional similarity of TVs based on geography. Only one of these was supported. Development of TVs and the reporting of how they are assigned need to be more rigorous and be better described.

  5. Bacterial diversity of siliciclastic sediments in a Thalassia testudinum meadow and the implications for Lucinisca nassula chemosymbiosis

    NASA Astrophysics Data System (ADS)

    Green-García, Angela M.; Engel, Annette Summers

    2012-10-01

    Despite the ecological and economic importance of Thalassia testudinum (turtle grass) meadows along the Caribbean and Gulf of Mexico coasts, and recognition that microbial activities are critical to plant growth and health, the bacterial diversity of these habitats has been poorly studied. Based on comparative analyses of 16S rRNA gene sequences from sediments in a T. testudinum meadow, 25 major taxonomic groups (excluding candidate divisions) were retrieved, including Alpha- Delta-, and Gamma-proteobacteria, Chloroflexi, Bacteroidetes, Acidobacteria, Spirochaetes, and Firmicutes. The distribution of bacterial groups was linked to a strongly hypoxic and sulfidic redox gradient. The diversity is potentially novel because phylogenetic affinities of sediment sequences compared to contextually annotated environmental clones from different habitats or to cultured representatives indicated approximately 41% were more closely related to each other than to sequences retrieved from these other habitats. Of all the relationships, very few (2.4%) were to cultured organisms, but 27% were to environmental clones retrieved from shallow marine shelf and coastal sediments or from mangroves, estuarine, or wetland sediments. Rare sequences were closely related to endosymbiont groups of Lucinisca nassula (Lucinidea: Bivalvia) hosts collected from the same meadow, which may indicate that the sediment is a potential reservoir for free-living symbionts. This study provides insight into the ecological and evolutionary relationships of the Thalassia-lucinid-bacteria system in tropical to sub-tropical regions.

  6. Mobile Element Evolution Playing Jigsaw—SINEs in Gastropod and Bivalve Mollusks

    PubMed Central

    Matetovici, Irina; Sajgo, Szilard; Ianc, Bianca; Ochis, Cornelia; Bulzu, Paul; Popescu, Octavian; Damert, Annette

    2016-01-01

    SINEs (Short INterspersed Elements) are widely distributed among eukaryotes. Some SINE families are organized in superfamilies characterized by a shared central domain. These central domains are conserved across species, classes, and even phyla. Here we report the identification of two novel such superfamilies in the genomes of gastropod and bivalve mollusks. The central conserved domain of the first superfamily is present in SINEs in Caenogastropoda and Vetigastropoda as well as in all four subclasses of Bivalvia. We designated the domain MESC (Romanian for MElc—snail and SCoica—mussel) because it appears to be restricted to snails and mussels. The second superfamily is restricted to Caenogastropoda. Its central conserved domain—Snail—is related to the Nin-DC domain. Furthermore, we provide evidence that a 40-bp subdomain of the SINE V-domain is conserved in SINEs in mollusks and arthropods. It is predicted to form a stable stem-loop structure that is preserved in the context of the overall SINE RNA secondary structure in invertebrates. Our analysis also recovered short retrotransposons with a Long INterspersed Element (LINE)-derived 5′ end. These share the body and/or the tail with transfer RNA (tRNA)-derived SINEs within and across species. Finally, we identified CORE SINEs in gastropods and bivalves—extending the distribution range of this superfamily. PMID:26739168

  7. Early life history and spatiotemporal changes in distribution of the rediscovered Suwannee moccasinshell Medionidus walkeri (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Johnson, Nathan A.; Mcleod, John; Holcomb, Jordan; Rowe, Matthew T.; Williams, James D.

    2016-01-01

    Accurate distribution data are critical to the development of conservation and management strategies for imperiled species, particularly for narrow endemics with life history traits that make them vulnerable to extinction. Medionidus walkeri is a rare freshwater mussel endemic to the Suwannee River Basin in southeastern North America. This species was rediscovered in 2012 after a 16-year hiatus between collections and is currently proposed for listing under the Endangered Species Act. Our study fills knowledge gaps regarding changes in distribution and early life history requirements of M. walkeri. Spatiotemporal changes in M. walkeri distribution were displayed using a conservation status assessment map incorporating metadata from 98 historical (1916–1999) and 401 recent (2000–2015) site surveys from museums and field notes representing records for 312 specimens. Recent surveys detected M. walkeri only in the middle Suwannee subbasin (n = 86, 22 locations) and lower Santa Fe subbasin (n = 2, 2 locations), and it appears the species may be extirpated from 67% of historically occupied 10-digit HUCs. In our laboratory experiments, M. walkeri successfully metamorphosed on Percina nigrofasciata (56.2% ± 8.9) and Etheostoma edwini (16.1% ± 7.9) but not on Trinectes maculatus, Lepomis marginatus, Notropis texanus, Noturus leptacanthus, Etheostoma fusiforme, or Gambusia holbrooki. We characterize M. walkeri as a lure-displaying host fish specialist and a long-term brooder (bradytictic), gravid from fall to early summer of the following year. The early life history and distribution data presented here provide the baseline framework for listing decisions and future efforts to conserve and recover the species.

  8. Application of the morpho-functional analysis of hydrobionts ( Anadara sp. cf. Anadara inaequivalvis Bivalvia) to environmental monitoring

    NASA Astrophysics Data System (ADS)

    Kolyuchkina, G. A.; Miljutin, D. M.

    2013-03-01

    The population dynamics and morphological and functional characteristics (the concentration of hemocytes in the hemolymph and the level of histopathology) of the bivalve Anadara sp. cf. Anadara inaequivalvis were studied in 2005-2007 on the North Caucasian coast of the Black Sea. A drastic decline in the abundance of the bivalves simultaneously with cadmium's exceedence in their soft tissues and bottom sediments were recorded in May of 2007. Six months before the manifestation of the population effects, morphological and functional changes (a decrease in the content of hemocytes in the hemolymph and an increase in the content of brown cells in the connective tissue and lipofuscin-like pigment granules in the digestive gland epithelium) in the bivalves were detected that were the consequences of an external effect (presumably, cadmium intoxication). Thus, the morphological and functional changes of the individual Anadaras may be a promising tool for the early detection of the impact of pollutants on benthic ecosystems.

  9. DIRECT MEASUREMENT TECHNIQUE FOR THE DETERMINING VENTILATION RATE IN THE DEPOSIT FEEDING CLAM, MACOMA NASUTA (BIVALVIA, TELLINACEAE)

    EPA Science Inventory

    An exposure chamber, the "clambox", was developed to measure ventilation rate, sediment processing rate, and efficiency of pollutant uptake byMacoma nasuta Conrad, a surface surface deposit-feeding clams. Clams, collected from Yaquina, Bay, Oregon, USA, were cemented into a hole ...

  10. Corbicula fluminea (Bivalvia: Corbiculidae): a possible second molluscan intermediate host of Echinostoma cinetorchis (Trematoda: Echinostomatidae) in Korea

    PubMed Central

    Jung, Younghun; Park, Yun-Kyu; Hwang, Myung-Gi; Soh, Chin-Thack

    2001-01-01

    More than 1,500 clams of Corbicula fluminea, the most favorable food source of freshwater bivalves in Korea, were collected from 5 localities to examine cercarial and metacercarial infection with Echinostoma cinetorchis. Although 3 clams infected with suspicious E. cinetorchis metacercariae out of 200 specimens collected at Kangjin, Chollanam-do were detected, no cercarial and metacercarial infections with E. cinetorchis were observed in field-collected Corbicula specimens. In the susceptibility experiments with laboratory-reared clams, those infected with miracidia of E. cinetorchis did not release their cercariae up to 60 days after infection. To confirm the identity of second intermediate host of E. cinetorchis experimentally, a total of 30 clams were exposed to the cercariae from Segmentina hemisphaerula that had been infected with miracidia of E. cinetorchis. The clams were susceptible to cercariae of E. cinetorchis with an infection rate of 93.3%. Metacercariae from clams taken more than 7 days after cercarial exposure were fed to rats (S/D strain), and adult worms of E. cinetorchis, characterized by 37-38 collar spines on the head crown, were recovered from the ileocecal regions. This is the first report of C. fluminea as a possible second intermediate host of E. cinetorchis. PMID:11775336

  11. Acute toxicity and accumulation of the piscicide 3-trifluoromethyl-4- nitrophenol (TFM) in freshwater mussels (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Waller, D.L.; Rach, J.J.; Luoma, J.A.

    1998-01-01

    We compared the acute toxicity and initial accumulation of the piscicide TFM (3-trifluoromethyl-4-nitrophenol) in the freshwater unionacean mussels, Obliquaria reflexa and Fusconaia flava. Acute 48 h toxicity tests were conducted to determine the LC50 values for each species. The initial uptake clearances of TFM were measured by exposing the mussels to [14C]-TFM and counting the radioactivity in four organ tissues (foot, gill, mantle and viscera) over 48 h. TFM was about 2-fold more toxic to O. reflexa (LC50 1.80 mg I-1) than to F. flava (LC50 3.81 mg L-1) and the difference was not explained by accumulation patterns. The initial uptake clearance rates (0-6 h) for the whole body were similar between the species (11.2 ml g-1 h-2 in O. reflexa and 9.5 ml g-1 h-1 in F. flava). The accumulation of TFM residues among the organ tissues was also similar between species. The uptake clearance rates (ml g-1 h-1) of TFM equivalents were generally highest in the gill, but not significantly different than other organ tissues. The normalized concentration of TFM residues (??g per g whole body) was highest in the viscera. The toxicity data suggest that the mortality of both species would be minimal from sea lamprey control treatments with TFM. However, the behavioural effects and accumulation rates also indicate that mussels do not effectively avoid TFM exposure by valve closure.

  12. Acute toxicity and accumulation of the piscicide 3-trifluoromethyl-4-nitrophenol (TFM) in freshwater mussels (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Waller, Diane L.; Rach, Jeffrey J.; Luoma, James A.

    1998-01-01

    We compared the acute toxicity and initial accumulation of the piscicide TFM (3-trifluoromethyl-4-nitrophenol) in the freshwater unionacean mussels, Obliquaria reflexa and Fusconaia flava. Acute 48 h toxicity tests were conducted to determine the LC50 values for each species. The initial uptake clearances of TFM were measured by exposing the mussels to [14C]-TFM and counting the radioactivity in four organ tissues (foot, gill, mantle and viscera) over 48 h. TFM was about 2-fold more toxic to O. reflexa (LC50 1.80 mg l-1) than to F. flava (LC50 3.81 mg L-1) and the difference was not explained by accumulation patterns. The initial uptake clearance rates (0–6 h) for the whole body were similar between the species (11.2 ml g-1 h-2 in O. reflexa and 9.5 ml g-1 h-1 in F. flava). The accumulation of TFM residues among the organ tissues was also similar between species. The uptake clearance rates (ml g-1 h-1) of TFM equivalents were generally highest in the gill, but not significantly different than other organ tissues. The normalized concentration of TFM residues (μg per g whole body) was highest in the viscera. The toxicity data suggest that the mortality of both species would be minimal from sea lamprey control treatments with TFM. However, the behavioural effects and accumulation rates also indicate that mussels do not effectively avoid TFM exposure by valve closure.

  13. Morphology of the larval shell of three oyster species of the genus Crassostrea Sacco, 1897 (Bivalvia: Ostreidae).

    PubMed

    Christo, S W; Absher, T M; Boehs, G

    2010-08-01

    In this study we describe the morphology of the larval shell of three oyster species of Crassostrea genus. Two species, C. rhizophorae and C. brasiliana, are native to the Brazilian coast, and C. gigas is an introduced species. Samples of laboratory reared larvae, obtained through artificial fertilisation, were collected at intervals during the cultivation process for analysis using Scanning Electron Microscopy (SEM). Prodissoconch morphology was observed in relation to the presence, position, form and number of teeth in the three larval stages: D-shaped larva, umbo larva and pediveliger. Characteristic of D-shaped larvae of C. rhizophorae was the total absence of teeth in the provinculum area while C. brasiliana and C. gigas had two anterior and two posterior teeth in each valve. In the umbo larval phase, the three species had the same number of teeth in each valve: two posterior and two anterior teeth in the right valve and three posterior and three anterior in the left valve. In the pediveliger stage the three species could be differentiated by the number of anterior teeth of the right valve: C. rhizophorae had two teeth, C. brasiliana one tooth and C. gigas three teeth.

  14. Low Genetic Diversity and High Invasion Success of Corbicula fluminea (Bivalvia, Corbiculidae) (Müller, 1774) in Portugal

    PubMed Central

    Gomes, Cidália; Sousa, Ronaldo; Mendes, Tito; Borges, Rui; Vilares, Pedro; Vasconcelos, Vitor; Guilhermino, Lúcia; Antunes, Agostinho

    2016-01-01

    The Asian clam, Corbicula fluminea, is an invasive alien species (IAS) originally from Asia that has spread worldwide causing major ecological and economic impacts in aquatic ecosystems. Here, we evaluated C. fluminea genetic (using COI mtDNA, CYTb mtDNA and 18S rDNA gene markers), morphometric and sperm morphology variation in Portuguese freshwater ecosystems. The COI marker revealed a single haplotype, which belongs to the Asian FW5 invasive lineage, suggesting a common origin for all the 13 Portuguese C. fluminea populations analysed. Morphometric analyses showed differences between the populations colonizing the North (with the exception of the Lima River) and the Centre/South ecosystems. The sperm morphology examination revealed the presence of biflagellate sperm, a distinctive character of the invasive androgenetic lineages. The low genetic variability of the Portuguese C. fluminea populations and the pattern of sperm morphology have been illuminating for understanding the demographic history of this invasive species. We hypothesize that these populations were derived from a unique introductory event of a Corbicula fluminea FW5 invasive androgenic lineage in the Tejo River, which subsequently dispersed to other Portuguese freshwater ecosystems. The C. fluminea asexual reproductive mode may have assisted these populations to become highly invasive despite the low genetic diversity. PMID:27391333

  15. Genetic structure and diversity of Nodularia douglasiae (Bivalvia: Unionida) from the middle and lower Yangtze River drainage.

    PubMed

    Liu, Xiongjun; Cao, Yanling; Xue, Taotao; Wu, Ruiwen; Zhou, Yu; Zhou, Chunhua; Zanatta, David T; Ouyang, Shan; Wu, Xiaoping

    2017-01-01

    The Yangtze River drainage in China is among the most species rich rivers for freshwater mussels (order Unionida) on Earth with at least 68 species known. The freshwater mussels of the Yangtze River face a variety of threats with indications that species are declining in abundance and area of occupancy. This study represents the first analyses of the genetic structure and diversity for the common and widespread freshwater mussel Nodularia douglasiae based on microsatellite DNA genotypes and mitochondrial DNA sequences. Phylogenetic analysis a fragment of the COI mitochondrial gene indicated that N. douglasiae collected from across the middle and lower Yangtze River drainage are monophyletic with N. douglasiae from Japan, Russia, and South Korea. The results of the analysis of both the mtDNA and microsatellite datasets indicated that the seven collection locations of N. douglasiae in the middle and lower Yangtze River drainage showed high genetic diversity, significant genetic differentiation and genetic structure, and stable population dynamics over time. Moreover, we found that the connections among tributaries rivers and lakes in the Yangtze River drainage were important in maintaining gene flow among locations that N. douglasiae inhabits. An understanding of the genetic structure and diversity of a widespread species like N. douglasiae could be used as a surrogate to better understand the populations of other freshwater mussel species that are more rare in the Yangtze River drainage. At the same time, these results could provide a basis for the protection of genetic diversity and management of unionid mussels diversity and other aquatic organisms in the system.

  16. Genetic structure and diversity of Nodularia douglasiae (Bivalvia: Unionida) from the middle and lower Yangtze River drainage

    PubMed Central

    Liu, Xiongjun; Cao, Yanling; Xue, Taotao; Wu, Ruiwen; Zhou, Yu; Zhou, Chunhua; Zanatta, David T.; Ouyang, Shan

    2017-01-01

    The Yangtze River drainage in China is among the most species rich rivers for freshwater mussels (order Unionida) on Earth with at least 68 species known. The freshwater mussels of the Yangtze River face a variety of threats with indications that species are declining in abundance and area of occupancy. This study represents the first analyses of the genetic structure and diversity for the common and widespread freshwater mussel Nodularia douglasiae based on microsatellite DNA genotypes and mitochondrial DNA sequences. Phylogenetic analysis a fragment of the COI mitochondrial gene indicated that N. douglasiae collected from across the middle and lower Yangtze River drainage are monophyletic with N. douglasiae from Japan, Russia, and South Korea. The results of the analysis of both the mtDNA and microsatellite datasets indicated that the seven collection locations of N. douglasiae in the middle and lower Yangtze River drainage showed high genetic diversity, significant genetic differentiation and genetic structure, and stable population dynamics over time. Moreover, we found that the connections among tributaries rivers and lakes in the Yangtze River drainage were important in maintaining gene flow among locations that N. douglasiae inhabits. An understanding of the genetic structure and diversity of a widespread species like N. douglasiae could be used as a surrogate to better understand the populations of other freshwater mussel species that are more rare in the Yangtze River drainage. At the same time, these results could provide a basis for the protection of genetic diversity and management of unionid mussels diversity and other aquatic organisms in the system. PMID:29261733

  17. Seasonal growth and mortality of juveniles of Lampsilis fasciola (Bivalvia: Unionidae) released to a fish hatchery raceway

    USGS Publications Warehouse

    Hanlon, Shane D.; Neves, Richard J.

    2006-01-01

    Recent efforts to restore remnant or extirpated populations of freshwater mussels have focused on artificial propagation as an effective and practical conservation strategy. Although artificially cultured juveniles have been produced and released to the wild at various times of the year, no study has investigated the best time of year to release these juveniles. Newly metamorphosed juveniles of the wavyrayed lampmussel (Lampsilis fasciola) were released into a stream-fed fish hatchery raceway during March, June, and September. Growth and survival rates were measured 32, 52, 72, and 92 days post-metamorphosis. Juveniles released in June experienced the greatest growth and survival rates. Juveniles released in September and March experienced high mortality within the first month of release and exhibited poor growth in the cool water conditions typical of those seasons. Overwinter survival exhibited a size-dependent relationship.

  18. Prodigious polyphyly in imperilled freshwater pearly-mussels (Bivalvia: Unionidae): a phylogenetic test of species and generic designations

    USGS Publications Warehouse

    Lydeard, Charles; Minton, Russell L.; Williams, James D.

    2000-01-01

    Unionid bivalves or freshwater pearly-mussels (Unionoidea: Unionidae) serve as an exemplary system for examining many of the problems facing systematists and conservation biologists today. Most of the species and genera were described in the late 1800s and early 1900s, but few phylogenetic studies have been conducted to test conventional views of species and classification. Pearly-mussels of Gulf Coastal drainages of the southeastern United States from the Escambia (southern Alabama to Florida) to the Suwannee Rivers (Florida) are a unique fauna comprised of approximately 100 species, with about 30 endemic to the region. In this study, mitochondrial cytochrome c oxidase subunit I and 16S rRNA gene sequences were used to test the monophyly and to estimate evolutionary relationships of five unionid species representing three different genera. The molecular phylogenies depict all three genera as polyphyletic. The prodigious polyphyly exhibited within unionids is due to incorrect notions of homology and false assumptions about missing anatomical data. In contrast, the molecular phylogeny provides evidence to support the recognition of all five unionid species as distinct evolutionary entities. Furthermore, molecular genealogical evidence supports the elevation of Quincuncina infucata (Conrad) of the Suwannee River to species level, for which Q. kleiniana (Lea) is available.

  19. Phylogeny of the most species-rich freshwater bivalve family (Bivalvia: Unionida: Unionidae): Defining modern subfamilies and tribes.

    PubMed

    Lopes-Lima, Manuel; Froufe, Elsa; Do, Van Tu; Ghamizi, Mohamed; Mock, Karen E; Kebapçı, Ümit; Klishko, Olga; Kovitvadhi, Satit; Kovitvadhi, Uthaiwan; Paulo, Octávio S; Pfeiffer, John M; Raley, Morgan; Riccardi, Nicoletta; Şereflişan, Hülya; Sousa, Ronaldo; Teixeira, Amílcar; Varandas, Simone; Wu, Xiaoping; Zanatta, David T; Zieritz, Alexandra; Bogan, Arthur E

    2017-01-01

    Freshwater mussels of the order Unionida are key elements of freshwater habitats and are responsible for important ecological functions and services. Unfortunately, these bivalves are among the most threatened freshwater taxa in the world. However, conservation planning and management are hindered by taxonomic problems and a lack of detailed ecological data. This highlights the urgent need for advances in the areas of systematics and evolutionary relationships within the Unionida. This study presents the most comprehensive phylogeny to date of the larger Unionida family, i.e., the Unionidae. The phylogeny is based on a combined dataset of 1032bp (COI+28S) of 70 species in 46 genera, with 7 of this genera being sequenced for the first time. The resulting phylogeny divided the Unionidae into 6 supported subfamilies and 18 tribes, three of which are here named for the first time (i.e., Chamberlainiini nomen novum, Cristariini nomen novum and Lanceolariini nomen novum). Molecular analyses were complemented by investigations of selected morphological, anatomical and behavioral characters used in traditional phylogenetic studies. No single morphological, anatomical or behavioral character was diagnostic at the subfamily level and few were useful at the tribe level. However, within subfamilies, many tribes can be recognized based on a subset of these characters. The geographical distribution of each of the subfamilies and tribes is also presented. The present study provides important advances in the systematics of these extraordinary taxa with implications for future ecological and conservation studies. Copyright © 2016 Elsevier Inc. All rights reserved.

  20. Reaction of the mussel Mytilus galloprovincialis (Bivalvia) to Eugymnanthea inquilina (Cnidaria) and Urastoma cyprinae (Turbellaria) concurrent infestation.

    PubMed

    Mladineo, Ivona; Petrić, Mirela; Hrabar, Jerko; Bočina, Ivana; Peharda, Melita

    2012-05-01

    In total 480 individuals of Mytilus galloprovincialis were sampled monthly from October 2009 to September 2010, at the shellfish farm in the Mali Ston Bay, south Adriatic Sea (Croatia) in order to assess the extent of pathology imposed by two parasites, Eugymnanthea inquilina (Cnidaria) and Urastoma cyprinae (Turbellaria). Although a deteriorating impact on host reproduction or condition index was lacking, we evidenced ultrastructural and functional alteration in host cells at the attachment site. Ultrastructural changes included hemocytic encapsulation of the turbellarian and cell desquamation in medusoid infestation. Caspase positive reaction inferred by immunohistochemistry (IHC) was triggered in cases of turbellarian infestation, in contrast with hydroids, suggesting that the former exhibits more complex host-parasite interaction, reflected in the persistent attempts of the parasite to survive bivalve reaction. We have evidenced that both organisms trigger specific host reaction that although not costly in terms of host reproductive cycle or growth, results in mild tissue destruction and hemocyte activation. A lower degree of tissue reaction was observed in cases of hydroid infestation, compared to turbellarian. Copyright © 2012 Elsevier Inc. All rights reserved.

  1. Physiological response of invasive mussel Limnoperna fortunei (Dunker, 1857) (Bivalvia: Mytilidae) submitted to transport and experimental conditions.

    PubMed

    Cordeiro, N I S; Andrade, J T M; Montresor, L C; Luz, D M R; Araújo, J M; Martinez, C B; Pinheiro, J; Vidigal, T H D A

    2017-03-01

    Successful animal rearing under laboratory conditions for commercial processes or laboratory experiments is a complex chain that includes several stressors (e.g., sampling and transport) and incurs, as a consequence, the reduction of natural animal conditions, economic losses and inconsistent and unreliable biological results. Since the invasion of the bivalve Limnoperna fortunei (Dunker, 1857) in South America, several studies have been performed to help control and manage this fouling pest in industrial plants that use raw water. Relatively little attention has been given to the laboratory rearing procedure of L. fortunei, its condition when exposed to a stressor or its acclimation into laboratory conditions. Considering this issue, the aims of this study are to (i) investigate L. fortunei physiological responses when submitted to the depuration process and subsequent air transport (without water/dry condition) at two temperatures, based on glycogen concentrations, and (ii) monitor the glycogen concentrations in different groups when maintained for 28 days under laboratory conditions. Based on the obtained results, depuration did not affect either of the groups when they were submitted to approximately eight hours of transport. The variation in glycogen concentration among the specimens that were obtained from the field under depurated and non-depurated conditions was significant only in the first week of laboratory growth for the non-depurated group and in the second week for the depurated group. In addition, the tested temperature did not affect either of the groups that were submitted to transport. The glycogen concentrations were similar to those of the specimens that were obtained from the field in third week, which suggests that the specimens acclimated to laboratory conditions during this period of time. Thus, the results indicate that the air transport and acclimation time can be successfully incorporated into experimental studies of L. fortunei. Finally, the tolerance of L. fortunei specimens to the stressor tested herein can help us understand the invasive capacity of this mussel during the establishment process.

  2. In situ distribution and characterization of the organic content of the oyster shell Crassostrea gigas (Mollusca, Bivalvia).

    PubMed

    Dauphin, Yannicke; Ball, Alexander D; Castillo-Michel, Hiram; Chevallard, Corinne; Cuif, Jean-Pierre; Farre, Bastien; Pouvreau, Stéphane; Salomé, Murielle

    2013-01-01

    Cultivation of commercial oysters is now facing the possible influence of global change in sea water composition, commonly referred to as "ocean acidification". In order to test the potential consequence of the predicted environmental changes, a cultivation experiment was carried out. The left and right valves of the oyster shell Crassostrea gigas differ in their structure; moreover, lenses of non compact layers are irregular. The shell layers of juvenile C. gigas are studied using a variety of highly spatially resolved techniques to establish their composition and structure. Our results confirm the presence of three different calcitic structural types. The role of the lenses of chalky layers is not yet deciplered. Despite a common mineralogy, the elemental composition of the layers differs. The sulphur aminoacids and sulphated polysaccharide contents of the intracrystalline and intercrystalline matrices differ, as well as those of the structural types. The possible different sensitivity of these structures to environmental changes is still unknown. Copyright © 2012 Elsevier Ltd. All rights reserved.

  3. Mobile Element Evolution Playing Jigsaw - SINEs in Gastropod and Bivalve Mollusks.

    PubMed

    Matetovici, Irina; Sajgo, Szilard; Ianc, Bianca; Ochis, Cornelia; Bulzu, Paul; Popescu, Octavian; Damert, Annette

    2016-01-06

    SINEs (Short INterspersed Elements) are widely distributed among eukaryotes. Some SINE families are organized in superfamilies characterized by a shared central domain. These central domains are conserved across species, classes, and even phyla. Here we report the identification of two novel such superfamilies in the genomes of gastropod and bivalve mollusks. The central conserved domain of the first superfamily is present in SINEs in Caenogastropoda and Vetigastropoda as well as in all four subclasses of Bivalvia. We designated the domain MESC (Romanian for MElc-snail and SCoica-mussel) because it appears to be restricted to snails and mussels. The second superfamily is restricted to Caenogastropoda. Its central conserved domain-Snail-is related to the Nin-DC domain. Furthermore, we provide evidence that a 40-bp subdomain of the SINE V-domain is conserved in SINEs in mollusks and arthropods. It is predicted to form a stable stem-loop structure that is preserved in the context of the overall SINE RNA secondary structure in invertebrates. Our analysis also recovered short retrotransposons with a Long INterspersed Element (LINE)-derived 5' end. These share the body and/or the tail with transfer RNA (tRNA)-derived SINEs within and across species. Finally, we identified CORE SINEs in gastropods and bivalves-extending the distribution range of this superfamily. © The Author(s) 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  4. Potential retention effect at fish farms boosts zooplankton abundance

    NASA Astrophysics Data System (ADS)

    Fernandez-Jover, D.; Toledo-Guedes, K.; Valero-Rodríguez, J. M.; Fernandez-Gonzalez, V.; Sanchez-Jerez, P.

    2016-11-01

    Coastal aquaculture activities influence wild macrofauna in natural environments due to the introduction of artificial structures, such as floating cages, that provide structural complexity in the pelagic system. This alters the abundance and distribution of the affected species and also their feeding behaviour and diet. Despite this, the effects of coastal aquaculture on zooplankton assemblages and the potential changes in their abundance and distribution remain largely unstudied. Traditional plankton sampling hauls between the farm mooring systems entail some practical difficulties. As an alternative, light traps were deployed at 2 farms in the SW Mediterranean during a whole warm season. Total zooplankton capture by traps at farms was higher than at control locations on every sampling night. It ranged from 3 to 10 times higher for the taxonomic groups: bivalvia, cladocera, cumacea, fish early-life-stages, gastropoda, polychaeta and tanaidacea; 10-20 times higher for amphipoda, chaetognatha, isopoda, mysidacea and ostracoda, and 22 times higher for copepoda and the crustacean juvenile stages zoea and megalopa. Permutational analysis showed significant differences for the most abundant zooplankton groups (copepoda, crustacean larvae, chaetognatha, cladocera, mysidacea and polychaeta). This marked incremental increase in zooplankton taxa at farms was consistent, irrespective of the changing environmental variables registered every night. Reasons for the greater abundance of zooplankton at farms are discussed, although results suggest a retention effect caused by cage structures rather than active attraction through physical or chemical cues.

  5. Genetic structure provides insights into the geographic origins and temporal change in the invasive charru mussel (Sururu) in the southeastern United States

    PubMed Central

    Walters, Linda J.; Fernandes, Flavio C.; Ferreira, Carlos E. L.

    2017-01-01

    In 2004, Mytella charruana (d'Orbigny, 1842) (Mollusca: Bivalvia: Mytilidae) became established along the coast of the southeastern United States (SE-US). Using mitochondrial DNA sequencing (cytochrome c oxidase subunit I), we compared genetic variation throughout its native range in South America to its invasive range in the SE-US. Samples from the SE-US were collected in 2006 and 2010 enabling a temporal comparison to evaluate possible genetic changes of the invasive population. We addressed two questions. First, what are the potential source populations (or geographic regions) for the SE-US invasion? Second, how has genetic diversity changed between the two sampling periods within the SE-US? We identified a total of 72 haplotypes, 64 of which were isolated to geographic sites and only 8 were shared among sites. The highly structured native range provides insight into the origin of invasive populations where our results suggest that the introduced SE-US population originated from multiple source populations with the Panama region as the primary source. Additionally, our results indicate that genetic composition of the non-native populations was unchanged between the two sampling periods. Mytella charruana exhibit a significant pattern of genetic structure among natural populations, owing to biogeographic barriers that limit natural dispersal, and an ability to persist in novel habitats, owing to a suite of life-history characters that favor survival under variable conditions. Overall, this study explains why M. charruana may become an increasing threat to locations founded by anthropogenic transportation. PMID:28686694

  6. Ross Sea Mollusca from the Latitudinal Gradient Program: R/V Italica 2004 Rauschert dredge samples

    PubMed Central

    Ghiglione, Claudio; Alvaro, Maria Chiara; Griffiths, Huw J.; Linse, Katrin; Schiaparelli, Stefano

    2013-01-01

    Abstract Information regarding the molluscs in this dataset is based on the Rauschert dredge samples collected during the Latitudinal Gradient Program (LGP) on board the R/V “Italica” in the Ross Sea (Antarctica) in the austral summer 2004. A total of 18 epibenthic dredge deployments/samplings have been performed at four different locations at depths ranging from 84 to 515m by using a Rauschert dredge with a mesh size of 500μm. In total 8,359 specimens have been collected belonging to a total of 161 species. Considering this dataset in terms of occurrences, it corresponds to 505 discrete distributional records (incidence data). Of these, in order of abundance, 5,965 specimens were Gastropoda (accounting for 113 species), 1,323 were Bivalvia (accounting for 36 species), 949 were Aplacophora (accounting for 7 species), 74 specimens were Scaphopoda (3 species), 38 were Monoplacophora (1 species) and, finally, 10 specimens were Polyplacophora (1 species). This data set represents the first large-scale survey of benthic micro-molluscs for the area and provides important information about the distribution of several species, which have been seldom or never recorded before in the Ross Sea. All vouchers are permanently stored at the Italian National Antarctic Museum (MNA), Section of Genoa, enabling future comparison and crosschecking. This material is also currently under study, from a molecular point of view, by the barcoding project “BAMBi” (PNRA 2010/A1.10). PMID:24146597

  7. Complete sequences of the highly rearranged molluscan mitochondrial genomes of the scaphopod graptacme eborea and the bivalve mytilus edulis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Boore, Jeffrey L.; Medina, Monica; Rosenberg, Lewis A.

    2004-01-31

    We have determined the complete sequence of the mitochondrial genome of the scaphopod mollusk Graptacme eborea (Conrad, 1846) (14,492 nts) and completed the sequence of the mitochondrial genome of the bivalve mollusk Mytilus edulis Linnaeus, 1758 (16,740 nts). (The name Graptacme eborea is a revision of the species formerly known as Dentalium eboreum.) G. eborea mtDNA contains the 37 genes that are typically found and has the genes divided about evenly between the two strands, but M. edulis contains an extra trnM and is missing atp8, and has all genes on the same strand. Each has a highly rearranged genemore » order relative to each other and to all other studied mtDNAs. G. eborea mtDNA has almost no strand skew, but the coding strand of M. edulis mtDNA is very rich in G and T. This is reflected in differential codon usage patterns and even in amino acid compositions. G. eborea mtDNA has fewer non-coding nucleotides than any other mtDNA studied to date, with the largest non-coding region being only 24 nt long. Phylogenetic analysis using 2,420 aligned amino acid positions of concatenated proteins weakly supports an association of the scaphopod with gastropods to the exclusion of Bivalvia, Cephalopoda, and Polyplacophora, but is generally unable to convincingly resolve the relationships among major groups of the Lophotrochozoa, in contrast to the good resolution seen for several other major metazoan groups.« less

  8. Propeamussiidae, Inoceramidae, and other Bivalvia from the Lower Cretaceous Puez Formation (Valanginian–Cenomanian; Dolomites, South Tyrol, Italy)☆

    PubMed Central

    Schneider, Simon; Crampton, James S.; Lukeneder, Alexander

    2013-01-01

    A bivalve assemblage from the Lower Cretaceous Puez Formation at the type locality, Piz de Puez (Dolomites, South Tyrol, northern Italy) is described. Given the large amount of sedimentary rock screened during the course of this study, the <50 bivalves examined here, although occurring in very low abundance, are considered to represent a reasonably comprehensive sample. The assemblage provides insight into an autochthonous, Mesozoic, deep-water bivalve community, which was dominated by glass scallops. Two species are described as new, Parvamussium pizpuezense n. sp. and the giant P. mordsdrum n. sp. Presumably, they lived as epifaunal-reclining carnivores and preyed on various meiofauna, occupying a similar ecologic niche as their modern counterparts. Scarce epifaunal, suspension-feeding Inoceramidae entered only by occasional recruitment of larvae into an environment that is inferred to have been characterised by low levels of suspended nutrients. PMID:27087719

  9. New lucinid bivalves from shallow and deeper water of the Indian and West Pacific Oceans (Mollusca, Bivalvia, Lucinidae)

    PubMed Central

    Taylor, John D.; Glover, Emily A.

    2013-01-01

    Abstract Four new species and a new genus of lucinid bivalves are described from shallow and deeper waters in the Indian and West Pacific Oceans. The new genus Scabrilucina (subfamily Lucininae) includes the little-known Scabrilucina victorialis (Melvill, 1899) from the Arabian Sea and Scabrilucina vitrea (Deshayes, 1844) from the Andaman Sea as well as a new species Scabrilucina melvilli from the Torres Strait off northeastern Australia. Ferrocina brunei new species (Lucininae) was recovered from 60 m near oil drilling activities off Borneo; its anatomy confirmed the presence of symbiotic bacteria. Two unusual deeper water species of Leucosphaerinae are described, both species included in on-going molecular analyses; Gonimyrtea ferruginea from 400–650 m in the southwest Pacific and Myrtina reflexa from 200–825 m off Zanzibar and Madagascar. PMID:24039537

  10. Pseudomonas fluorescens strain CL145A - a biopesticide for the control of zebra and quagga mussels (Bivalvia: Dreissenidae).

    PubMed

    Molloy, Daniel P; Mayer, Denise A; Gaylo, Michael J; Morse, John T; Presti, Kathleen T; Sawyko, Paul M; Karatayev, Alexander Y; Burlakova, Lyubov E; Laruelle, Franck; Nishikawa, Kimi C; Griffin, Barbara H

    2013-05-01

    Zebra mussels (Dreissena polymorpha) and quagga mussels (Dreissena rostriformis bugensis) are the "poster children" of high-impact aquatic invasive species. In an effort to develop an effective and environmentally acceptable method to control their fouling of raw-water conduits, we have investigated the potential use of bacteria and their natural metabolic products as selective biological control agents. An outcome of this effort was the discovery of Pseudomonas fluorescens strain CL145A - an environmental isolate that kills these dreissenid mussels by intoxication (i.e., not infection). In the present paper, we use molecular methods to reconfirm that CL145A is a strain of the species P. fluorescens, and provide a phylogenetic analysis of the strain in relation to other Pseudomonas spp. We also provide evidence that the natural product lethal to dreissenids is associated with the cell wall of P. fluorescens CL145A, is a heat-labile secondary metabolite, and has degradable toxicity within 24 h when applied to water. CL145A appears to be an unusual strain of P. fluorescens since it was the only one among the ten strains tested to cause high mussel mortality. Pipe trials conducted under once-through conditions indicated: (1) P. fluorescens CL145A cells were efficacious against both zebra and quagga mussels, with high mortalities achieved against both species, and (2) as long as the total quantity of bacterial cells applied during the entire treatment period was the same, similar mussel mortality could be achieved in treatments lasting 1.5-12.0 h, with longer treatment durations achieving lower mortalities. The efficacy data presented herein, in combination with prior demonstration of its low risk of non-target impact, indicate that P. fluorescens CL145A cells have significant promise as an effective and environmentally safe control agent against these invasive mussels. Copyright © 2012 Elsevier Inc. All rights reserved.

  11. Integrative study of a new cold-seep mussel (Mollusca: Bivalvia) associated with chemosynthetic symbionts in the Marmara Sea

    NASA Astrophysics Data System (ADS)

    Ritt, Bénédicte; Duperron, Sébastien; Lorion, Julien; Sara Lazar, Cassandre; Sarrazin, Jozée

    2012-09-01

    Recently, small Idas-like mussels have been discovered living on carbonate crusts associated with cold-seeps in the Marmara Sea. These mussels, here referred to as Idas-like nov. sp., differ morphologically and genetically from another species identified as Idas aff. modiolaeformis, living in the same type of ecosystem in the Nile Deep-Sea Fan (eastern Mediterranean Sea). A phylogenetic analysis confirms the distinction between the two species, which belong to highly divergent lineages. Carbon stable isotope values, as well as the detection of thiotroph-related bacteria in the gill tissue, support the presence of a symbiotic, thiotroph-derived nutrition. In contrast, Idas aff. modiolaeformis displays six different types of symbionts. Finally our size-frequency data suggest that the recruitment is continuous in the examined area. The present study extends the documented distribution of symbiont-bearing mussels to the Marmara Sea, and contributes to the characterisation of biological communities in this recently explored area.

  12. High-resolution elemental records of Glycymeris glycymeris (Bivalvia) shells from the Iberian upwelling system: Ontogeny and environmental control

    NASA Astrophysics Data System (ADS)

    Freitas, Pedro; Richardson, Christopher; Chenery, Simon; Butler, Paul; Reynolds, David; Gaspar, Miguel; Scourse, James

    2015-04-01

    The great potential of bivalve shells as a high-resolution geochemical proxy archive of environmental conditions at the time of growth has been known for several decades. The elemental composition of bivalve shells has been studied with the purpose of reconstructing environmental conditions: e.g. seawater temperature (Sr and Mg), primary productivity (Li, Mn, Mo and Ba), redox conditions (Mn and Mo), terrigenous inputs (Li) and pollution (Cu, Zn, Cd and Pb). However, the interpretation of such records remains extremely challenging and complex, with processes affecting element incorporation in the shell (e.g. crystal fabrics, organic matrix, shell formation mechanisms and physiological processes) and the influence of more than one environmental parameter affecting elemental composition of bivalve shells. Nevertheless, bivalve shells remain an underused source of information on environmental conditions, with the potential to record high-resolution (sub-weekly to annually), multi-centennial time series of geochemical proxy data. The relatively long-lived bivalve (>100 years) Glycymeris glycymeris occurs in coastal shelf seas of Europe and North West Africa and is a valid annually resolved sclerochronological archive for palaeonvironmental reconstructions. The temporal framework provided by absolute annually dated shell material makes Glycymeris glycymeris a valuable, albeit unexplored, resource for investigating sub-annually resolved geochemical proxies. We present a first evaluation on the potential of Ba, P and U, the latter two elements rarely studied in bivalves, in Glycymeris glycymeris shells to record variations in the environmental conditions, respectively primary productivity, dissolved inorganic phosphorus and carbonate ion concentration/pH. High-resolution (31 to 77 samples per year) profiles of elemental/Ca ratios (E/Ca) over four years of growth (2001 to 2004) were obtained by LA-ICP-MS on two shells (13 and 16 years old) live-collected in 2010 at 30 m water depth on the Iberia upwelling system. In both shells, clear E/Ca annual cycles with significant higher-frequency variability (weekly to sub-monthly) were observed over the four years of growth analysed. However, E/Ca ratios and the amplitude of the annual E/Ca cycles were lower in the older shell and showed decreasing trends with age (ontogenetic effects). E/Ca ratios were age-detrended using statistical techniques derived from dendrochronology, resulting in similar and coherent profiles in both shells. It seems unlikely that enough variability in E/Ca ratios will be recorded in the shell after 15 to 20 years of age to allow the retrieval of an environmental signal by age-detrending E/Ca ratios. Detrended P/Ca, Ba/Ca and U/Ca in Glycymeris glycymeris shells showed coherent variations with coeval modelled and instrumental oceanographic series from the Iberia upwelling system that suggest a robust potential as an archive of environmental conditions in the first 15 to 20 years of growth. Nevertheless a robust calibration is required to distinguish between the influences of multiple environmental parameters. This study was financed and conducted in the frame of the Portuguese FCT GLYCY Project (contract PTDC/AAC-CLI/118003/2010).

  13. Immunochemical localization of ribulose-1,5-bisphosphate carboxylase in the symbiont-containing gills of Solemya velum (Bivalvia: Mollusca).

    PubMed

    Cavanaugh, C M; Abbott, M S; Veenhuis, M

    1988-10-01

    The distribution of the Calvin cycle enzyme ribulose-1,5-bisphosphate carboxylase (RbuP(2)Case; EC 4.1.1.39) was examined by using two immunological methods in tissues of Solemya velum, an Atlantic coast bivalve containing putative chemoautotrophic symbionts. Antibodies elicited by the purified large subunit of RbuP(2)Case from tobacco (Nicotiana tabacum) cross-reacted on immunoblots with a protein of similar molecular mass occurring in extracts of the symbiont-containing gill tissue of S. velum. No cross-reactivity was detected in symbiont-free tissue extracts. The antiserum also cross-reacted in immunoblots with proteins of Thiobacillus neapolitanus, a free-living sulfuroxidizing chemoautotroph whose RbuP(2)Case has been well characterized. In protein A-gold immunoelectron microscopy studies, this antiserum consistently labeled the symbionts but not surrounding host gill tissue, indicating that the symbionts are responsible for the RbuP(2)Case activity.

  14. Shell microstructures of mussels (Bivalvia: Mytilidae: Bathymodiolinae) from deep-sea chemosynthetic sites: Do they have a phylogenetic significance?

    NASA Astrophysics Data System (ADS)

    Génio, Luciana; Kiel, Steffen; Cunha, Marina R.; Grahame, John; Little, Crispin T. S.

    2012-06-01

    The increasing number of bathymodiolin mussel species being described from deep-sea chemosynthetic environments worldwide has raised many questions about their evolutionary history, and their systematics is still being debated. Mussels are also abundant in fossil chemosynthetic assemblages, but their identification is problematic due to conservative shell morphology within the group and preservation issues. Potential resolution of bathymodiolin taxonomy requires new character sets, including morphological features that are likely to be preserved in fossil specimens. To investigate the phylogenetic significance of shell microstructural features, we studied the shell microstructure and mineralogy of 10 mussel species from hydrothermal vents and hydrocarbon seeps, and 15 taxa from sunken wood and bone habitats, and compared these observations with current molecular phylogenies of the sub-family Bathymodiolinae. In addition, we analyzed the shell microstructure in Adipicola chickubetsuensis from fossil whale carcasses, and in Bathymodiolus cf. willapaensis and “Modiola exbrocchii” from fossil cold seeps, and discussed the usefulness of these characters for identification of fossil chemosymbiotic mussels. Microstructural shell features are quite uniform among vent, seep, wood and bone mussel taxa, and therefore established bathymodiolin lineages cannot be discriminated, nor can the relations between fossil and modern species be determined with these characters. Nevertheless, the uniformity of shell microstructures observed among chemosymbiotic mussels and the similarity with its closest relative, Modiolus modiolus, does not challenge the monophyly of the group. Slight differences are found between the large vent and seep mussels and the small mytilids commonly found in habitats enriched in organic matter. Together with previous data, these results indicate that a repeated pattern of paedomorphism characterizes the evolutionary history of deep-sea mussels, and the occurrence of neotenous features should be considered in the taxonomic revision of this group.

  15. Modelling the risk of mortality of Corbicula fluminea (Müller, 1774) (Bivalvia: Corbiculidae) exposed to different turbidity conditions.

    PubMed

    Avelar, W E P; Neves, F F; Lavrador, M A S

    2014-05-01

    The provision of sediment in rivers, due to erosion processes that occur in the environment, consists of a major source of pollution and alteration of the physicochemical conditions of water resources. In addition, the increase in water turbidity may cause siltation, dramatically impacting aquatic communities. Specifically considering the bivalve Corbicula fluminea (Müller, 1774), the aim of this study was to analyse the effect of exposure to different turbidity conditions of sediments, as a risk factor for the animals. For this purpose, a docking device was designed to ensure water circulation in a closed system and to maintain the desired levels of turbidity. Although C. fluminea can generally tolerate environmental changes in aquatic systems, an intolerance to high turbidity levels was experimentally observed, expressed by the mortality rate of the animals when exposed to conditions above 150 nephelometric turbidity units (NTU). This value was similar to the one recorded at study sites in the rivers Pardo (Serrana-SP-Brazil) and Mogi Guaçu (Porto Ferreira-SP-Brazil) during the rainy season. Using a logistic regression model, the experimental results were analysed and the observed mortality rates indicate that the exposure of the animals to turbidity levels above 150 nephelometric turbidity units (NTU), for periods longer than 120 hours, may be considered a probable cause of mortality for the species.

  16. Numerical Quantification of Perkinsus Marinus in the American Oyster Crassostrea virginicata (Gmelin 1791) (Mollusca: Bivalvia) by Modern Stereology

    EPA Science Inventory

    Species of Perkinsus are responsible for high mortalities of bivalve molluscs world-wide. Techniques to accurately estimate parasites in tissues are required to improve understanding of perkinsosis. This study quantifies the number and tissue distribution of Perkinsus marinus in ...

  17. Mulinia lateralis (Mollusca: Bivalvia) die-off in South Carolina: discovery of a vector for two elasmobranch cestode species.

    PubMed

    de Buron, Isaure; Roth, Patricia B; Bergquist, Derk C; Knott, David M

    2013-02-01

    Unexplained and episodic die-offs of the dwarf surf clam, Mulinia lateralis , have been reported on the West Atlantic coast, with such an occurrence in South Carolina in June 2010. A sample of live clams from the 2010 South Carolina event was collected, and 200 clams were measured and necropsied. Two species of tapeworm larvae were observed. Plerocercoids (Duplicibothrium sp.) occupied the digestive gland ducts, and merocercoids (Rhodobothrium sp.) were found beneath the mantle. Specimens of both species were sequenced to obtain partial 28S rRNA gene sequences, and they were identified as the tetraphyllidean D. minutum and the rhinebothriidean R. paucitesticulare, based on an NCBI Standard Nucleotide BLAST search. Of the 200 clams, 2.1% were infected with merocercoids (mean intensity 1.3 ± 0.2) and 75% with plerocercoids (mean intensity 4.3 ± 3.7). Intensity of infection by plerocercoids increased significantly with individual shell length. The presence of plerocercoids was associated with enlargement of the digestive gland ducts, but no other pathology was observed. Because uninfected clams were abundant among the stranded molluscs, these parasites are not considered to be the causative agent of the die-off. This is a new host record for both elasmobranch tapeworms.

  18. Behavioral responses of Arctica islandica (Bivalvia: Arcticidae) to simulated leakages of carbon dioxide from sub-sea geological storage.

    PubMed

    Bamber, Shaw D; Westerlund, Stig

    2016-11-01

    Sub-sea geological storage of carbon dioxide (CO 2 ) provides a viable option for the Carbon Capture and Storage (CCS) approach for reducing atmospheric emissions of this greenhouse gas. Although generally considered to offer a low risk of major leakage, it remains relevant to establish the possible consequences for marine organisms that live in or on sediments overlying these storage areas if such an event may occur. The present study has used a series of laboratory exposures and behavioral bioassays to establish the sensitivity of Arctica islandica to simulated leakages of CO 2 . This long-lived bivalve mollusc is widely distributed throughout the North Sea, an area where geological storage is currently taking place and where there are plans to expand this operation significantly. A recently published model has predicted a maximum drop of 1.9pH units in seawater at the point source of a substantial escape of CO 2 from sub-sea geological storage in this region. Valve movements of A. islandica exposed to reduced pH seawater were recorded continuously using Hall effect proximity sensors. Valve movement regulation is important for optimising the flow of water over the gills, which supplies food and facilitates respiration. A stepwise reduction in seawater pH showed an initial increase in both the rate and extent of valve movements in the majority of individuals tested when pH fell to 6.2 units. Exposing A. islandica to pH 6.2 seawater continuously for seven days resulted in a clear increase in valve movements during the first 40h of exposure, followed by a gradual reduction in activity intensity over the subsequent five days, suggesting acclimation. The ability of both exposed and control bivalves to burrow successfully into sediment on completion of this exposure was very similar. A final exposure trial, testing whether increased valve movements initiated by reduced pH were related to foot extension during attempted burrowing, found no such association. In summary, significant changes in valve behavior did not occur until seawater pH fell to 6.2 units. The response took the form of an increase in valve activity rather than closure. The absence of foot extension coincident with increased valve movements indicates A. islandica were not attempting to burrow, leaving the possibility that valve movements are supporting a respiratory response to hypercapnia. In conclusion, A. islandica appears to be tolerant of reductions in seawater pH equivalent to those predicted for substantial losses of CO 2 through leakage from sub-sea geological storage. Copyright © 2016 Elsevier B.V. All rights reserved.

  19. Effect of zinc and benzene on respiration and excretion of mussel larvae (Perna perna) (Linnaeus, 1758) (Mollusca; Bivalvia).

    PubMed

    Jorge, R A D L V C; Lemos, D; Moreira, G S

    2007-02-01

    The presence of pollutants in the ocean may affect different physiological parameters of animals. Oxygen consumption and ammonia excretion were evaluated in D-shaped larvae of mussels (Perna perna) exposed to zinc sulphate (ZnSO(4)) and benzene (C(6)H(6)). When compared to the control group, both pollutants presented a significant reduction in oxygen consumption. A reduction in the ammonia excretion was also observed, both for ZnSO(4) and C(6)H(6) and also in the oxygen consumption. The results indicate that anaerobic metabolism may occur at the beginning of P. perna mussels development, as observed in veliger larvae. The O:N ratio under experimental conditions showed low values indicating that catabolism in veliger larvae was predominantly proteic.

  20. Phylogeny, phylogeography, and evolution in the Mediterranean region: News from a freshwater mussel (Potomida, Unionida).

    PubMed

    Froufe, Elsa; Prié, Vincent; Faria, João; Ghamizi, Mohamed; Gonçalves, Duarte V; Gürlek, Mustafa Emre; Karaouzas, Ioannis; Kebapçi, Ümit; Şereflişan, Hülya; Sobral, Carina; Sousa, Ronaldo; Teixeira, Amílcar; Varandas, Simone; Zogaris, Stamatis; Lopes-Lima, Manuel

    2016-07-01

    The Potomida genus (Bivalvia, Unionida) has a Circum-Mediterranean distribution and like other freshwater mussel species, its populations have suffered dramatic declines. Although this genus is currently considered as monotypic, it has a long history of taxonomic revisions and presently many aspects of its systematics and evolutionary history are unclear. We sampled a total of 323 individuals from 39 different sites across the Potomida genus distribution, and sequenced two mitochondrial (16S rDNA and Cytochrome c Oxidase Subunit I) and one nuclear (28S rDNA) genes to clarify its phylogeny and phylogeographic history. Our results show that the genus includes two well-supported clades, one comprising solely the western Mediterranean species Potomida littoralis, and the other including two eastern Mediterranean species, the Greek endemic P. acarnanica and the Anatolian and Middle Eastern P. semirugata. We suggest that Potomida started radiating during the upper Miocene, and that both vicariance and dispersal events shaped the diversification and distribution of the genus along the Mediterranean region. P. littoralis is further divided in two mitochondrial lineages, one restricted to Europe and the other occurring mostly in North Africa. Moreover, some European basins present both lineages in sympatry. The conservation status of the three recognized species should be reevaluated, particularly P. acarnanica, since it is restricted to two Greek river basins presenting a high risk of extinction. Overall, our results clarify some important gaps in knowledge concerning the phylogeny, phylogeography and evolution of the Potomida genus in the Mediterranean region with important taxonomical, ecological and conservational implications. Copyright © 2016 Elsevier Inc. All rights reserved.

  1. Radiological impact of TEPCO's Fukushima Dai-ichi Nuclear Power Plant accident on invertebrates in the coastal benthic food web.

    PubMed

    Sohtome, Tadahiro; Wada, Toshihiro; Mizuno, Takuji; Nemoto, Yoshiharu; Igarashi, Satoshi; Nishimune, Atsushi; Aono, Tatsuo; Ito, Yukari; Kanda, Jota; Ishimaru, Takashi

    2014-12-01

    Radioactive cesium ((134)Cs and (137)Cs) concentrations in invertebrates of benthic food web (10 taxonomic classes with 46 identified families) collected from wide areas off Fukushima Prefecture (3-500 m depth) were inspected from July 2011, four months after the Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident, to August 2013 to elucidate time-series trends among taxa and areas. Cesium-137 was detected in seven classes (77% of 592 specimens). Higher (137)Cs concentrations within detected data were often found in areas near or south of the FDNPP, which is consistent with the reported spatial distribution of (137)Cs concentrations in highly contaminated seawater and sediments after the FDNPP accident. Overall (137)Cs concentrations in invertebrates, the maxima of which (290 Bq kg(-1)-wet in the sea urchin Glyptocidaris crenularis) were lower than in many demersal fishes, had decreased exponentially with time, and exhibited taxon-specific decreasing trends. Concentrations in Bivalvia and Gastropoda decreased clearly with respective ecological half-lives of 188 d and 102 d. In contrast, decreasing trends in Malacostraca and Polychaeta were more gradual, with longer respective ecological half-lives of 208 d and 487 d. Echinoidea showed no consistent trend, presumably because of effects of contaminated sediments taken into their digestive tract. Comparison of (137)Cs concentrations in the invertebrates and those in seawater and sediments suggest that contaminated sediments are the major source of continuing contamination in benthic invertebrates, especially in Malacostraca and Polychaeta. Copyright © 2014 Elsevier Ltd. All rights reserved.

  2. Strong pathways for incorporation of terrestrially derived organic matter into benthic communities

    NASA Astrophysics Data System (ADS)

    McLeod, Rebecca J.; Wing, Stephen R.

    2009-05-01

    In Fiordland, New Zealand, large volumes of organic matter are deposited into the marine environment from pristine forested catchments. Analyses of δ15N, δ13C and δ34S were employed to determine whether these inputs were contributing to marine food webs via assimilation by common macroinvertebrates inhabiting the inner reaches of the fjords. Terrestrially derived organic matter (TOM) had values of δ15N, δ13C and δ34S that were distinct from other carbon source pools, providing sufficient power to quantify the contribution of TOM to the benthic food web. Isotopic values among macroinvertebrates varied significantly, with consistently low values of δ15N, δ13C and δ34S for the abundant deposit feeders Echinocardium cordatum (Echinodermata) and Pectinaria australis (Annelida), indicating assimilation of TOM. High concentrations of bacterial fatty acid biomarkers in E. cordatum, and values of δ13C of these biomarkers similar to TOM (-27 to -30‰) confirmed that TOM is indirectly assimilated by these sea urchins via heterotrophic bacteria. TOM was also found to enter the infaunal food web via chemoautotrophic bacteria that live symbiotically within Solemya parkinsonii (Bivalvia). Echinocardium cordatum, Pectinaria australis and S. parkinsonii comprised up to 33.5% of the biomass of the macroinfaunal community, and thus represent strong pathways for movement of organic matter from the forested catchments into the benthic food web. This demonstration of connectivity among adjacent marine and terrestrial habitats has important implications for coastal land management, and highlights the importance of intact coastal forests to marine ecosystem function.

  3. Wetland macroinvertebrates of Prentiss Bay, Lake Huron, Michigan: diversity and functional group composition

    USGS Publications Warehouse

    Merritt, R.W.; Benbow, M.E.; Hudson, P.L.

    2002-01-01

    The Great Lakes support many fish and waterbirds that depend directly or indirectly on coastal wetlands during some portion of their life cycle. It is known that macroinvertebrates make up an important part of wetland food webs and ecosystem function; however, our understanding of species distribution within and among wetlands has only recently received attention. We investigated the macroinvertebrates of a freshwater marsh (Prentiss Bay) in the Les Chenaux Island Area of Northern Lake Huron, Michigan. Macroinvertebrate taxa diversity and functional feeding group composition were compared between two habitats. A shallow depositional habitat with higher vegetation diversity and little wave action was compared to a deeper erosional habitat with fewer plant species and more wave action. A total of 83 taxa were collected over the summer of 1996, representing two phyla (Arthropoda and Mollusca) and five classes (Arachnida, Bivalvia, Malacostraca, Gastropoda and Insecta). A total of 79 genera were identified, with 92% being insects (39 families composed of at least 73 genera). Of the total, 42 insect genera were common to both habitats,while relatively fewer were collected exclusively from the erosional compared the depositional habitat. When habitats were pooled, predators comprised about 50% of the functional group taxa, while gathering collectors and shredders each were about 20%. Filtering collectors and scrapers each represented < 10%. When comparing habitats, there was a relatively higher percentage of predators and shredders in the depositional habitat, while all other functional groups were lower. These data suggest that vegetation diversity, depth and wave action affect taxa composition and functional group organization of the Prentiss Bay marsh.

  4. Sr/Ca and Mg/Ca in Glycymeris glycymeris (Bivalvia) shells from the Iberian upwelling system: Ontogeny and environmental control

    NASA Astrophysics Data System (ADS)

    Freitas, Pedro; Richardson, Christopher; Chenery, Simon; Monteiro, Carlos; Butler, Paul; Reynolds, David; Scourse, James; Gaspar, Miguel

    2017-04-01

    Bivalve shells have a great potential as high-resolution geochemical proxy archives of marine environmental conditions. In addition, sclerochronology of long-lived bivalve species (e.g. Arctica islandica) provides a timeline of absolutely dated shell material for geochemical analysis that can extend into the past beyond the lifetime of single individuals through the use of replicated crossmatched centennial to millennial chronologies. However, the interpretation of such records remains extremely challenging and complex, with multiple environmental and biological processes affecting element incorporation in the shell (e.g. crystal fabrics, organic matrix, biomineralization mechanisms and physiological processes). As a result, the effective use of bivalve shell elemental/Ca ratios as palaeoenvironmental proxies has been limited, often to species-specific applications or applications restricted to particular environmental settings. The dog-cockle, Glycymeris glycymeris, is a relatively long-lived bivalve (up to 200 years) that occurs in coarse-grained subtidal sediments of coastal shelf seas of Europe and North West Africa. Glycymeris glycymeris shells provide a valuable, albeit not fully explored, archive to reconstruct past environmental variability in an area lacking sclerochronological studies due to the rarity of long-lived bivalves and lack of coral reefs. In this study, we evaluate the potential of Sr/Ca and Mg/Ca ratios in G. glycymeris shells as geochemical proxies of upwelling conditions in the Iberian Upwelling System, the northern section of the Canary Current Eastern Boundary Upwelling System. Sr/Ca and Mg/Ca generally co-varied significantly and a clear ontogenetic, non-environmental related change in Sr/Ca and Ba/Ca variability was observed. High Sr/Ca and Mg/Ca ratios in older shells (> 10 years old) were found to be associated with the occurrence of growth lines deposited during the winter reduction in shell growth. Nevertheless, Sr/Ca and Mg/Ca variation in older shells was synchronous with contemporary environmental conditions, i.e. upwelling intensity and salinity. The use of Sr or Mg in G. glycymeris shells as valid geochemical environmental proxies in the Iberian Upwelling System remains complex and requires further research to unravel environmental and physiological/biomineralization controls. This study was financed by the Portuguese Fundação para a Ciência e Tecnologia (FCT) GLYCY Project (contract PTDC/AAC-CLI/118003/2010) and a sabbatical grant to PSF (Ref: SFRH/BSAB/127786/2016), co-supported by POCH and the European Social Fund. Funding for consumable costs was provided by Bangor University.

  5. Long-term monitoring of growth in the Eastern Elliptio, Elliptio complanata (Bivalvia: Unionidae), in Rhode Island: A transplant experiment

    USGS Publications Warehouse

    Kesler, D.H.; Newton, T.J.; Green, L.

    2007-01-01

    The lengths of marked specimens of the freshwater mussel, Eastern Elliptio (Elliptio complanata [Lightfoot 1786]), were monitored annually in 3 lakes in Rhode Island, USA, from 1991 to 2005. Mussels growing in Worden Pond showed a change in mean shell length of only 4.3 mm over 14 y, whereas mussel growth in 2 nearby lakes was 3 to 8x greater than growth in Worden Pond over the same time period. L???, the length at which shell growth stops, was significantly different (p < 0.001) among lakes and ranged from 60.5 to 87.4 mm. Transplant experiments revealed that mussels moved to Worden Pond stopped growing, whereas mussels moved from Worden Pond to the 2 other lakes grew at rates similar to the rates observed for resident mussels in the 2 lakes. Standard water-quality measures did not explain the observed growth cessation and lower condition indices of mussels in Worden Pond. Our growth data are consistent with food limitation. The consistent slow growth of E. complanata in Worden Pond, without high mortality, and its ability to increase growth when placed in environments more favorable than Worden Pond, suggests both growth plasticity and longevity in these animals. ?? 2007 by The North American Benthological Society.

  6. Combined effects of temperature acclimation and cadmium exposure on mitochondrial function in eastern oysters Crassostrea virginica gmelin (Bivalvia: Ostreidae).

    PubMed

    Cherkasov, Anton S; Ringwood, Amy H; Sokolova, Inna M

    2006-09-01

    Cadmium and temperature have strong impacts on the metabolic physiology of aquatic organisms. To analyze the combined impact of these two stressors on aerobic capacity, effects of Cd exposure (50 microg/L) on mitochondrial function were studied in oysters (Crassostrea virginica) acclimated to 12 and 20 degrees C in winter and to 20 and 28 degrees C in fall. Cadmium exposure had different effects on mitochondrial bioenergetics of oysters depending on the acclimation temperature. In oysters acclimated to 12 degrees C, Cd exposure resulted in elevated intrinsic rates of mitochondrial oxidation, whereas at 28 degrees C, a rapid and pronounced decrease of mitochondrial oxidative capacity was found in Cd-exposed oysters. At the intermediate acclimation temperature (20 degrees C), effects of Cd exposure on intrinsic rates of mitochondrial oxidation were negligible. Degree of coupling significantly decreased in mitochondria from 28 degrees C-acclimated oysters but not in that from 12 degrees C- or 20 degrees C-acclimated oysters. Acclimation at elevated temperatures also increased sensitivity of oyster mitochondria to extramitochondrial Cd. Variation in mitochondrial membrane potential explained 41% of the observed variation in mitochondrial adenosine triphosphate synthesis and proton leak between different acclimation groups of oysters. Temperature-dependent sensitivity of metabolic physiology to Cd has significant implications for toxicity testing and for extrapolation of laboratory studies to field populations of aquatic poikilotherms, indicating the importance of taking into account the thermal regime of the environment.

  7. Characterization of the Population of the Sulfur-Oxidizing Symbiont of Codakia orbicularis (Bivalvia, Lucinidae) by Single-Cell Analyses▿ †

    PubMed Central

    Caro, Audrey; Gros, Olivier; Got, Patrice; De Wit, Rutger; Troussellier, Marc

    2007-01-01

    We investigated the characteristics of the sulfur-oxidizing symbiont hosted in the gills of Codakia orbicularis, a bivalve living in shallow marine tropical environments. Special attention was paid to describing the heterogeneity of the population by using single-cell approaches including flow cytometry (FCM) and different microscopic techniques and by analyzing a cell size fractionation experiment. Up to seven different subpopulations were distinguished by FCM based on nucleic acid content and light side scattering of the cells. The cell size analysis of symbionts showed that the symbiotic population was very heterogeneous in size, i.e., ranging from 0.5 to 5 μm in length, with variable amounts of intracellular sulfur. The side-scatter signal analyzed by FCM, which is often taken as a proxy of cell size, was greatly influenced by the sulfur content of the symbionts. FCM revealed an important heterogeneity in the relative nucleic acid content among the subclasses. The larger cells contained exceptionally high levels of nucleic acids, suggesting that these cells contained multiple copies of their genome, i.e., ranging from one copy for the smaller cells to more than four copies for the larger cells. The proportion of respiring symbionts (5-cyano-2,3-ditolyl-terazolium chloride positive) in the bacteriocytes of Codakia revealed that around 80% of the symbionts hosted by Codakia maintain respiratory activity throughout the year. These data allowed us to gain insight into the functioning of the symbionts within the host and to propose some hypotheses on how the growth of the symbionts is controlled by the host. PMID:17259363

  8. Temporal variation in life-history traits of the clam Tivela mactroides (Bivalvia: Veneridae): Density-dependent processes in sandy beaches

    NASA Astrophysics Data System (ADS)

    Turra, Alexander; Petracco, Marcelo; Amaral, A. Cecilia Z.; Denadai, Márcia R.

    2014-10-01

    Temporal variation in the structure and dynamics of a population of Tivela mactroides was examined over two periods (2003-2004 and 2007-2008) in the southern part of Caraguatatuba Bay, southeastern Brazil. During the first period from January 2003 to October 2004, sampling was conducted monthly. Sampling in the second period was performed in the summer (January and February 2007 and 2008) and winter (July and August 2007 and 2008). The von Bertalanffy growth function was applied to estimate growth parameters for both periods from length-frequency distributions. Production was determined using the mass-specific growth rate method. Results indicated that the mean abundance (±SE) of T. mactroides varied sharply between the two periods, with an increase of almost 150 times from 2003 to 2004 (8.67·102 ± 0.83·102 ind m-1) to 2007-2008 (1.25·105 ± 3.33·104 ind m-1). The higher abundance in the second period was related to successful recruitment events. While the mean biomass and the production were higher in the second (5.43 ± 0.87 kg AFDM m-1 and 7.89 kg AFDM m-1 yr-1) than in the first period (0.18 ± 0.02 kg AFDM m-1 and 0.18 kg AFDM m-1 yr-1), lower values of shell length, curvature parameter, asymptotic length of the VBGF, and the growth index phi-prime in 2007-2008 (17.57 ± 1.35 mm; K = 0.40 yr-1; L∞ = 38.60 mm, ϕ‧ = 2.78) than in 2003-2004 (26.21 ± 1.21 mm; K = 1.00 yr-1; L∞ = 40.75 mm, ϕ‧ = 3.22) were related to a strongly density-dependent growth process in the second period. The oscillation in growth observed in the second, but not in the first period also indicates a process of density-dependent growth. These sharp temporal variations in population parameters of T. mactroides suggest the occurrence of density-dependent processes, and reinforce the importance of these processes in structuring sandy-beach populations.

  9. MetaSINEs: Broad Distribution of a Novel SINE Superfamily in Animals

    PubMed Central

    Nishihara, Hidenori; Plazzi, Federico; Passamonti, Marco; Okada, Norihiro

    2016-01-01

    SINEs (short interspersed elements) are transposable elements that typically originate independently in each taxonomic clade (order/family). However, some SINE families share a highly similar central sequence and are thus categorized as a SINE superfamily. Although only four SINE superfamilies (CORE-SINEs, V-SINEs, DeuSINEs, and Ceph-SINEs) have been reported so far, it is expected that new SINE superfamilies would be discovered by deep exploration of new SINEs in metazoan genomes. Here we describe 15 SINEs, among which 13 are novel, that have a similar 66-bp central region and therefore constitute a new SINE superfamily, MetaSINEs. MetaSINEs are distributed from fish to cnidarians, suggesting their common evolutionary origin at least 640 Ma. Because the 3′ tails of MetaSINEs are variable, these SINEs most likely survived by changing their partner long interspersed elements for retrotransposition during evolution. Furthermore, we examined the presence of members of other SINE superfamilies in bivalve genomes and characterized eight new SINEs belonging to the CORE-SINEs, V-SINEs, and DeuSINEs, in addition to the MetaSINEs. The broad distribution of bivalve SINEs suggests that at least three SINEs originated in the common ancestor of Bivalvia. Our comparative analysis of the central domains of the SINEs revealed that, in each superfamily, only a restricted region is shared among all of its members. Because the functions of the central domains of the SINE superfamilies remain unknown, such structural information of SINE superfamilies will be useful for future experimental and comparative analyses to reveal why they have been retained in metazoan genomes during evolution. PMID:26872770

  10. Richness, systematics, and distribution of molluscs associated with the macroalga Gigartina skottsbergii in the Strait of Magellan, Chile: A biogeographic affinity study.

    PubMed

    Rosenfeld, Sebastián; Aldea, Cristian; Mansilla, Andrés; Marambio, Johanna; Ojeda, Jaime

    2015-01-01

    Knowledge about the marine malacofauna in the Magellan Region has been gained from many scientific expeditions that were carried out during the 19th century. However, despite the information that exists about molluscs in the Magellan Region, there is a lack of studies about assemblages of molluscs co-occurring with macroalgae, especially commercially exploitable algae such as Gigartina skottsbergii, a species that currently represents the largest portion of carrageenans within the Chilean industry. The objective of this study is to inform about the richness, systematics, and distribution of the species of molluscs associated with natural beds in the Strait of Magellan. A total of 120 samples from quadrates of 0.25 m(2) were obtained by SCUBA diving at two sites within the Strait of Magellan. Sampling occurred seasonally between autumn 2010 and summer 2011: 15 quadrates were collected at each site and season. A total of 852 individuals, corresponding to 42 species of molluscs belonging to Polyplacophora (9 species), Gastropoda (24), and Bivalvia (9), were identified. The species richness recorded represents a value above the average richness of those reported in studies carried out in the last 40 years in sublittoral bottoms of the Strait of Magellan. The biogeographic affinity indicates that the majority of those species (38%) present an endemic Magellanic distribution, while the rest have a wide distribution in the Magellanic-Pacific, Magellanic-Atlantic, and Magellanic-Southern Ocean. The molluscs from the Magellan Region serve as study models for biogeographic relationships that can explain long-reaching patterns and are meaningful in evaluating possible ecosystemic changes generated by natural causes or related to human activities.

  11. Compound-Specific Amino Acid Isotopic Analysis of Benthic Food Webs in the Chukchi Sea

    NASA Astrophysics Data System (ADS)

    Zhang, M.; Cooper, L. W.; Biasatti, D. M.; Grebmeier, J. M.

    2014-12-01

    The Chukchi Sea is known for locally high standing stocks of benthic macrofauna and strong coupling between pelagic-benthic components of the ecosystem. However, benthic food structure is not fully understood, due to varied sources of particulate organic matter (POM) and the high diversity of benthic invertebrates. We provide the first demonstration of the application of compound-specific amino acid isotope analysis to study the dietary sources and trophic structure for this Arctic marginal sea. About 20 stations in Chukchi Sea were sampled during cruises in August of 2012 and 2013. At each station, phytoplankton, POM and benthic fauna were collected, processed and analyzed using GC-C-IRMS (gas chromatography-combustion-isotope ratio mass spectrometry). Among benthic fauna, dominant species included the following taxonomic groups: Ophiuroidea, Amphipoda, Polychaeta, Gastropoda, Bivalvia, and Cnidaria. The benthic fauna showed similar patterns of individual amino acid δ13C, with glycine the most enriched in 13C and leucine the most depleted in 13C. Specific amino acids including phenylalanine showed spatial variability in δ13C and δ15N values within the sampled area, indicating contributions of different dietary sources including phytoplankton, sea ice algae, benthic algae and terrestrial organic materials. δ15N values of individual amino acids such as the difference between glutamic acid and phenylalanine, i.e. Δ15Nglu-phe (δ15Nglu - δ15Nphe), were also used to identify trophic levels of benthic invertebrates relative to estimates available from bulk δ15N values. These data will ultimately be used to evaluate the spatial variability of organic carbon sources and trophic level interactions of dominant benthic species in the Chukchi Sea.

  12. Diversity of macrofaunal Mollusca of the abyssal Vema Fracture Zone and hadal Puerto Rico Trench, Tropical North Atlantic

    NASA Astrophysics Data System (ADS)

    Linse, Katrin; Schwabe, Enrico

    2018-02-01

    While biodiversity patterns of Atlantic deep-sea bivalves and gastropods have served as model taxa for setting global latitudinal and bathymetric hypotheses, less is known on abyssal, amphi-Atlantic molluscan assemblage compositions. The Vema-TRANSIT expedition sampled 17 stations in the Vema Fracture Zone (VFZ) and the Puerto Rico Trench (PRT) by epibenthic sledge. These samples comprised a total of 1333 specimens and 64 morphospecies of the classes Caudofoveata (7 species), Solenogastres (7 spp.), Bivalvia (22 spp.), Gastropoda (24 spp.), and Scaphopoda (4 spp.) while Cephalopoda, Monoplacophora and Polyplacophora were absent. The majority of species was rare with 21 uniques (32.8% of all species) and 10 duplicates (15.6% of all species) and of these 15 (48% of rare/23.4% of all species) morphospecies were singletons and 8 (25.8% of rare/12.5% of all species) morphospecies were doubletons. Overall bivalves (686 specimens) were most abundant, followed by scaphopods (314 spec.), while solenogastres (180 spec.), caudofoveates (86 spec.) and gastropods (67 spec.) were less abundant. The abyssal macro-molluscan species composition did not vary significantly between the eastern and western Atlantic sides of the VFZ while abundances standardized to 1000 m2 trawled area were higher on the eastern side. The abyssal PRT stations resembled the VFZ ones in species composition and abundances, in the latter the eastern VFZ. The hadal PRT differed in species composition from the abyssal VFZ and PRT and abundances were similarly low like the western VFZ. The Mid-Atlantic Ridge appeared not to be a barrier for the dispersal of the mostly lecitotrophic or plankotrophic larval stages of the reported molluscan species in this study.

  13. The mineralogical responses of marine calcifiers to CO2-induced ocean acidification

    NASA Astrophysics Data System (ADS)

    Ries, J. B.; Cohen, A. L.; McCorkle, D. C.

    2008-12-01

    We have conducted 6-month laboratory experiments to investigate the effect of pCO2-induced reductions in seawater CaCO3 saturation state on biocalcification by 18 aragonitic and calcitic (low-high Mg) taxa representing eight of the major marine calcifying groups: Chlorophyta; Rhodophyta; Crustacea; Bivalvia; Gastropoda; Annelida; Cnidaria; and Echinodermata. The CaCO3 saturation states of the experimental seawaters, constrained by intercalibrated determinations of pH, alkalinity, and DIC, were attained with bubbled air-CO2 mixtures of 400 (ambient), 600, 900, and 2850 ppm pCO2, yielding Ωarag of 2.5 (ambient), 2.0, 1.5, 0.7, respectively. We previously showed that while rates of net calcification obtained from buoyant weighing declined with increasing pCO2 for nearly half of the species investigated, a nearly equal number exhibited constant or, in some cases, increased calcification under moderately (600 ppm) or extremely (900 or 2850 ppm) elevated pCO2. The organisms' investigated in this study secrete various forms of CaCO3, which differ in crystallographic structure and therefore solubility: aragonite and high-Mg are generally more soluble than low-Mg calcite. We have employed powder x-ray diffraction, Raman spectroscopy, inductively-coupled-plasma mass-spectrometry, and scanning electron microscopy to quantify changes in the organisms' skeletal mineralogy (aragonite:calcite ratio) and Mg-content (MgCO3:CaCO3 ratio) that occurred in response to the prescribed reductions in seawater CaCO3 saturation state. We will compare calcification and mineralogical response patterns amongst the organisms to elucidate the role of mineral lability in driving species-specific responses to CO2-induced ocean acidification.

  14. Haematopoiesis in molluscs: a review of haemocyte development and function in gastropods, cephalopods and bivalves

    PubMed Central

    Pila, EA; Sullivan, JT; Wu, XZ; Fang, J; Rudko, SP; Gordy, MA; Hanington, PC

    2015-01-01

    Haematopoiesis is a process that is responsible for generating sufficient numbers of blood cells in the circulation and in tissues. It is central to maintenance of homeostasis within an animal, and is critical for defense against infection. While haematopoiesis is common to all animals possessing a circulatory system, the specific mechanisms and ultimate products of haematopoietic events vary greatly. Our understanding of this process in non-vertebrate organisms is primarily derived from those species that serve as developmental and immunological models, with sparse investigations having been carried out in other organisms spanning the metazoa. As research into the regulation of immune and blood cell development advances, we have begun to gain insight into haematopoietic events in a wider array of animals, including the molluscs. What began in the early 1900’s as observational studies on the morphological characteristics of circulating immune cells has now advanced to mechanistic investigations of the cytokines, growth factors, receptors, signalling pathways, and patterns of gene expression that regulate molluscan haemocyte development. Emerging is a picture of an incredible diversity of developmental processes and outcomes that parallels the biological diversity observed within the different classes of the phylum Mollusca. However, our understanding of haematopoiesis in molluscs stems primarily from the three most-studied classes, the Gastropoda, Cephalopoda and Bivalvia. While these represent perhaps the molluscs of greatest economic and medical importance, the fact that our information is limited to only 3 of the 9 extant classes in the phylum highlights the need for further investigation in this area. In this review, we summarize the existing literature that defines haematopoiesis and its products in gastropods, cephalopods and bivalves. PMID:26592965

  15. Haematopoiesis in molluscs: A review of haemocyte development and function in gastropods, cephalopods and bivalves.

    PubMed

    Pila, E A; Sullivan, J T; Wu, X Z; Fang, J; Rudko, S P; Gordy, M A; Hanington, P C

    2016-05-01

    Haematopoiesis is a process that is responsible for generating sufficient numbers of blood cells in the circulation and in tissues. It is central to maintenance of homeostasis within an animal, and is critical for defense against infection. While haematopoiesis is common to all animals possessing a circulatory system, the specific mechanisms and ultimate products of haematopoietic events vary greatly. Our understanding of this process in non-vertebrate organisms is primarily derived from those species that serve as developmental and immunological models, with sparse investigations having been carried out in other organisms spanning the metazoa. As research into the regulation of immune and blood cell development advances, we have begun to gain insight into haematopoietic events in a wider array of animals, including the molluscs. What began in the early 1900's as observational studies on the morphological characteristics of circulating immune cells has now advanced to mechanistic investigations of the cytokines, growth factors, receptors, signalling pathways, and patterns of gene expression that regulate molluscan haemocyte development. Emerging is a picture of an incredible diversity of developmental processes and outcomes that parallels the biological diversity observed within the different classes of the phylum Mollusca. However, our understanding of haematopoiesis in molluscs stems primarily from the three most-studied classes, the Gastropoda, Cephalopoda and Bivalvia. While these represent perhaps the molluscs of greatest economic and medical importance, the fact that our information is limited to only 3 of the 9 extant classes in the phylum highlights the need for further investigation in this area. In this review, we summarize the existing literature that defines haematopoiesis and its products in gastropods, cephalopods and bivalves. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Richness, systematics, and distribution of molluscs associated with the macroalga Gigartina skottsbergii in the Strait of Magellan, Chile: A biogeographic affinity study

    PubMed Central

    Rosenfeld, Sebastián; Aldea, Cristian; Mansilla, Andrés; Marambio, Johanna; Ojeda, Jaime

    2015-01-01

    Abstract Knowledge about the marine malacofauna in the Magellan Region has been gained from many scientific expeditions that were carried out during the 19th century. However, despite the information that exists about molluscs in the Magellan Region, there is a lack of studies about assemblages of molluscs co-occurring with macroalgae, especially commercially exploitable algae such as Gigartina skottsbergii, a species that currently represents the largest portion of carrageenans within the Chilean industry. The objective of this study is to inform about the richness, systematics, and distribution of the species of molluscs associated with natural beds in the Strait of Magellan. A total of 120 samples from quadrates of 0.25 m2 were obtained by SCUBA diving at two sites within the Strait of Magellan. Sampling occurred seasonally between autumn 2010 and summer 2011: 15 quadrates were collected at each site and season. A total of 852 individuals, corresponding to 42 species of molluscs belonging to Polyplacophora (9 species), Gastropoda (24), and Bivalvia (9), were identified. The species richness recorded represents a value above the average richness of those reported in studies carried out in the last 40 years in sublittoral bottoms of the Strait of Magellan. The biogeographic affinity indicates that the majority of those species (38%) present an endemic Magellanic distribution, while the rest have a wide distribution in the Magellanic-Pacific, Magellanic-Atlantic, and Magellanic-Southern Ocean. The molluscs from the Magellan Region serve as study models for biogeographic relationships that can explain long-reaching patterns and are meaningful in evaluating possible ecosystemic changes generated by natural causes or related to human activities. PMID:26448707

  17. Detecting Subtle Shifts in Ecosystem Functioning in a Dynamic Estuarine Environment

    PubMed Central

    Pratt, Daniel R.; Lohrer, Andrew M.; Thrush, Simon F.; Hewitt, Judi E.; Townsend, Michael; Cartner, Katie; Pilditch, Conrad A.; Harris, Rachel J.; van Colen, Carl; Rodil, Iván F.

    2015-01-01

    Identifying the effects of stressors before they impact ecosystem functioning can be challenging in dynamic, heterogeneous ‘real-world’ ecosystems. In aquatic systems, for example, reductions in water clarity can limit the light available for photosynthesis, with knock-on consequences for secondary consumers, though in naturally turbid wave-swept estuaries, detecting the effects of elevated turbidity can be difficult. The objective of this study was to investigate the effects of shading on ecosystem functions mediated by sandflat primary producers (microphytobenthos) and deep-dwelling surface-feeding macrofauna (Macomona liliana; Bivalvia, Veneroida, Tellinidae). Shade cloths (which reduced incident light intensity by ~80%) were deployed on an exposed, intertidal sandflat to experimentally stress the microphytobenthic community associated with the sediment surface. After 13 weeks, sediment properties, macrofauna and fluxes of oxygen and inorganic nutrients across the sediment-water interface were measured. A multivariate metric of ecosystem function (MF) was generated by combining flux-based response variables, and distance-based linear models were used to determine shifts in the drivers of ecosystem function between non-shaded and shaded plots. No significant differences in MF or in the constituent ecosystem function variables were detected between the shaded and non-shaded plots. However, shading reduced the total explained variation in MF (from 64% in non-shaded plots to 15% in shaded plots) and affected the relative influence of M. liliana and other explanatory variables on MF. This suggests that although shade stress may shift the drivers of ecosystem functioning (consistent with earlier investigations of shading effects on sandflat interaction networks), ecosystem functions appear to have a degree of resilience to those changes. PMID:26214854

  18. Molecular systematics of the critically-endangered North American spinymussels (Unionidae: Elliptio and Pleurobema) and description of Parvaspina gen. nov.

    USGS Publications Warehouse

    Perkins, Michael A.; Johnson, Nathan A.; Gangloff, Michael M.

    2017-01-01

    Despite being common in numerous marine bivalve lineages, lateral spines are extremely rare among freshwater bivalves (Bivalvia: Unionidae), with only three known species characterized by the presence of spines: Elliptio spinosa, Elliptio steinstansana, and Pleurobema collina. All three taxa are endemic to the Atlantic Slope of southeastern North America, critically endangered, and protected by the US Endangered Species Act. Currently, these species are recognized in two genera and remain a source of considerable taxonomic confusion. Because spines are rare in freshwater mussels and restricted to a small region of North America, we hypothesized that spinymussels represent a monophyletic group. We sequenced two mtDNA gene fragments (COI and ND1) and a fragment of the nuclear ITS-1 locus from >70 specimens. Bayesian and maximum-likelihood phylogenetic reconstructions suggest that the spinymussels do not comprise a monophyletic group. Elliptio steinstansana is sister to P. collina, forming a monophyletic clade that was estimated to have diverged from its most recent ancestor in the late Miocene and is distinct from both Elliptio and Pleurobema; we describe a new genus (Parvaspina gen. nov.) to reflect this relationship. Additionally, E. spinosa forms a monophyletic clade that diverged from members of the core Elliptio lineage in the mid-Pliocene. Furthermore, E. spinosa is genetically divergent from the other spinymussel species, suggesting that spines, while extremely rare in freshwater mussels worldwide, may have evolved independently in two bivalve lineages. Recognizing the genetic distinctiveness and inter-generic relationships of the spinymussels is an important first step towards effectively managing these imperiled species and lays the groundwork for future conservation genetics studies.

  19. A new species of Pulvinites (Mollusca: Bivalvia) from the upper Paleocene Paspotansa Member of the Aquia Formation in Virginia ( USA).

    USGS Publications Warehouse

    Ward, L.W.; Waller, T.R.

    1988-01-01

    Pulvinites lawrencei n.sp. is described from the upper Paleocene (Landenian Stage) Paspotansa Member of the Aquia Formation in Stafford County, Virginia. This is the first report of a member of the pteriacean family Pulvinitidae in the Tertiary on either side of the Atlantic, the only other post-Mesozoic records of Pulvinites being in the Paleocene of California and the present-day Pacific off southeast Australia. The stratigraphic setting and co-occurring molluscan assemblage of the new species indicate shallow-shelf, open-marine conditions with near normal salinities. -Authors

  20. Morphological and Genetic Diversity of the Wood-Boring Xylophaga (Mollusca, Bivalvia): New Species and Records from Deep-Sea Iberian Canyons

    PubMed Central

    Romano, Chiara; Voight, Janet Ruth; Pérez-Portela, Rocío; Martin, Daniel

    2014-01-01

    Deep-sea bivalves of the Xylophagaidae, a poorly known group, are obligate wood-borers. Deployment of wood in three submarine canyons off the Iberian coast, the Blanes and La Fonera Canyons (Mediterranean Sea) and the Avilés Canyon (Cantabric Sea, Bay of Biscay), lead to the discovery of four xylophagaid species in our samples. Xylophaga dorsalis (the dominant species), X. atlantica, X. cf. anselli and the new species X. brava, were identified on the basis of morphological data, and supported by a phylogenetic reconstruction based on the nuclear genes 18S rDNA and 28S rDNA and including several genus of Xylophagaidae. Genetic divergence between species of Xylophaga varied between genes, ranging from 0.5 to 4.0% for the 18SrDNA and from 4.1 to 16.6% for the 28SrDNA. Xylophaga brava sp. nov. appeared to be restricted to the Mediterranean and morphologically resembled the closely related X. cf. anselli from the Cantabrian Sea. However, they clearly diverged in two well-supported clades. Low levels of intraspecific variability and higher interspecific divergence between species also supported the existence of these two different species. Morphologically they differ in the number of cirri at the siphon openings, in the shape of the posterior shell and in the size of prodissoconch II. The new species is characterized by having weak, poorly mineralized mesoplax and siphons united throughout, covered by a periostracal, non-calcified tube; distinct proximal and distal siphons, the former translucent and soft, the latter muscular, with concentric rings. Xylophaga atlantica, previously known only from the western Atlantic, is reported for the first time in the Mediterranean Sea. Whether its presence in the Mediterranean indicates its natural distribution or reflects its recent introduction is unknown. Although xylophagaids have been previously reported to recruit heavily to wood deposited on the seabed, these four species colonized wood suspended 30 m above the seafloor. PMID:25061913

  1. Morphological and genetic diversity of the wood-boring Xylophaga (Mollusca, Bivalvia): new species and records from deep-sea Iberian canyons.

    PubMed

    Romano, Chiara; Voight, Janet Ruth; Pérez-Portela, Rocío; Martin, Daniel

    2014-01-01

    Deep-sea bivalves of the Xylophagaidae, a poorly known group, are obligate wood-borers. Deployment of wood in three submarine canyons off the Iberian coast, the Blanes and La Fonera Canyons (Mediterranean Sea) and the Avilés Canyon (Cantabric Sea, Bay of Biscay), lead to the discovery of four xylophagaid species in our samples. Xylophaga dorsalis (the dominant species), X. atlantica, X. cf. anselli and the new species X. brava, were identified on the basis of morphological data, and supported by a phylogenetic reconstruction based on the nuclear genes 18S rDNA and 28S rDNA and including several genus of Xylophagaidae. Genetic divergence between species of Xylophaga varied between genes, ranging from 0.5 to 4.0% for the 18SrDNA and from 4.1 to 16.6% for the 28SrDNA. Xylophaga brava sp. nov. appeared to be restricted to the Mediterranean and morphologically resembled the closely related X. cf. anselli from the Cantabrian Sea. However, they clearly diverged in two well-supported clades. Low levels of intraspecific variability and higher interspecific divergence between species also supported the existence of these two different species. Morphologically they differ in the number of cirri at the siphon openings, in the shape of the posterior shell and in the size of prodissoconch II. The new species is characterized by having weak, poorly mineralized mesoplax and siphons united throughout, covered by a periostracal, non-calcified tube; distinct proximal and distal siphons, the former translucent and soft, the latter muscular, with concentric rings. Xylophaga atlantica, previously known only from the western Atlantic, is reported for the first time in the Mediterranean Sea. Whether its presence in the Mediterranean indicates its natural distribution or reflects its recent introduction is unknown. Although xylophagaids have been previously reported to recruit heavily to wood deposited on the seabed, these four species colonized wood suspended 30 m above the seafloor.

  2. Extirpation of freshwater mussels (Bivalvia: Unionidae) following the invasion of dreissenid mussels in an interconnecting river of the Laurentian Great Lakes

    USGS Publications Warehouse

    Schloesser, Don W.; Metcalfe-Smith, Janice L.; Kovalak, William P.; Longton, Gary D.; Smithee, Rick D.

    2006-01-01

    Previous (1992-1994) surveys for native freshwater mussels (Unionidae) along main channels of the Detroit River showed that unionids had been extirpated from all but four sites in the upper reaches of the river due to impacts of dreissenid mussels (Dreissena polymorpha and D. bugensis). These four sites were surveyed again in 1998 using the same sampling method (timed-random searches) to determine if they may serve as ''refugia'' where unionids and dreissenids co-exist. Two additional sites were sampled using additional methods (excavated-quadrat and line-transect searches) for comparison with unpublished data collected in 1987 and 1990. A total of four individuals of four species (Actinonaias ligamentina, Cyclonaias tuberculata, Lasmigona complanata and Pleurobema sintoxia) were found by timed-random searches at four sites in 1998 compared to 720 individuals of 24 species in 1992 and 39 individuals of 13 species in 1994. Excavated-quadrat and line-transect searches at the two additional sites yielded only one live specimen of Ptychobranchus fasciolaris compared to 288 individuals of 18 species in 1987 and 1990. Results of this study suggest that remaining densities of unionids in channels of the Detroit River are too low to support viable reproducing populations of any species. Therefore, we conclude that unionids have been extirpated from main channels of the Detroit River due to dreissenid infestation. As the Detroit River was one of the first water bodies in North America to be invaded by dreissenids, it is likely that unionids will also be extirpated from many other rivers and lakes across eastern North America over the next few decades. Resource agencies should be encouraged to implement active management programs to protect remaining unionid populations from zebra mussels.

  3. Host specificity of Pisidium coreanum (Bivalvia: Sphaeriidae) to larval infection with a human intestinal fluke Echinostoma cinetorchis (Trematoda: Echinostomatidae) in Korea.

    PubMed

    Park, Y K; Soh, C T; Park, G M; Hwang, M K; Chung, P R

    2006-10-01

    The fingernail clam, Pisidium coreanum, has been traditionally consumed raw as a so-called drug therapy by patients with bone fractures in Korea. The present study was designed to determine the possible occurrence and, if present, the prevalence of Echinostoma cinetorchis in P. coreanum collected at a local site, and to determine the susceptibility of the clams in the laboratory to infection with miracidia and cercariae of E. cinetorchis. No cercariae or metacercariae of E. cinetorchis were observed in field-collected P. coreanum clams. In susceptibility experiments with laboratory-reared clams, individuals exposed to miracidia of E. cinetorchis did not release cercariae by 20 days after exposure; necropsy of exposed clams failed to show development of any sporocysts or rediae. To confirm the possibility of these clams serving as an experimental second intermediate host of E. cinetorchis, 20 of them were exposed to E. cinetorchis cercariae from experimentally infected Segmentina hemisphaerula that had been previously exposed to miracidia of E. cinetorchis; all exposed clams became infected. Metacercariae from clams at 14 days postinfection were fed to rats, and adult worms were recovered from the ileocecal regions. This is the first report of P. coreanum serving as second intermediate host of E. cinetorchis.

  4. Genetic diversity and population genetic analysis of Donax vittatus (Mollusca: Bivalvia) and phylogeny of the genus with mitochondrial and nuclear markers

    NASA Astrophysics Data System (ADS)

    Fernández-Pérez, Jenyfer; Froufe, Elsa; Nantón, Ana; Gaspar, Miguel B.; Méndez, Josefina

    2017-10-01

    In this study, the genetic diversity of Donax vittatus across the Iberian Peninsula was investigated using four mitochondrial (COI, Cytb, 16S F and M types) and three nuclear (H3, 18S and 28S) genes. These same molecular markers were also sequenced in D. semistriatus and D variegatus to address the phylogenetic relationships of the species of the genus Donax common along the European coasts. Our results showed high haplotype diversity in combination with a low nucleotide diversity and a star-shaped network with a predominant haplotype, indicating a recent population expansion for the examined sampling sites of D. vittatus. Furthermore, analyses of population differentiation performed with COI mitochondrial marker, including global FST estimation and pairwise FST values, indicated the non-existence of significant genetic structure in D. vittatus of Northwest Iberian populations. Because these localities show a high genetic similarity, we suggest that D. vittatus could be a potentially alternative exploitable resource, as complement to the D. trunculus fisheries, whose natural stocks have decreased dramatically in some areas. Furthermore, we present for the first time, evidence of DUI in the clams D. vittatus and D. semistriatus.

  5. Genetic relationships among freshwater mussel species from fifteen Amazonian rivers and inferences on the evolution of the Hyriidae (Mollusca: Bivalvia: Unionida).

    PubMed

    Santos-Neto, Guilherme da Cruz; Beasley, Colin Robert; Schneider, Horacio; Pimpão, Daniel Mansur; Hoeh, Walter Randolph; Simone, Luiz Ricardo Lopes de; Tagliaro, Claudia Helena

    2016-07-01

    The current phylogenetic framework for the South American Hyriidae is solely based on morphological data. However, freshwater bivalve morphology is highly variable due to both genetic and environmental factors. The present study used both mitochondrial (COI and 16S) and nuclear (18S-ITS1) sequences in molecular phylogenetic analyses of nine Neotropical species of Hyriidae, collected from 15 South American rivers, and sequences of hyriids from Australia and New Zealand obtained from GenBank. The present molecular findings support traditional taxonomic proposals, based on morphology, for the South American subfamily Hyriinae, currently divided in three tribes: Hyriini, Castaliini and Rhipidodontini. Phylogenetic trees based on COI nucleotide sequences revealed at least four geographical groups of Castalia ambigua: northeast Amazon (Piriá, Tocantins and Caeté rivers), central Amazon, including C. quadrata (Amazon and Aripuanã rivers), north (Trombetas river), and C. ambigua from Peru. Genetic distances suggest that some specimens may be cryptic species. Among the Hyriini, a total evidence data set generated phylogenetic trees indicating that Paxyodon syrmatophorus and Prisodon obliquus are more closely related, followed by Triplodon corrugatus. The molecular clock, based on COI, agreed with the fossil record of Neotropical hyriids. The ancestor of both Australasian and Neotropical Hyriidae is estimated to have lived around 225million years ago. Copyright © 2016 Elsevier Inc. All rights reserved.

  6. Cell proliferation and apoptosis in gill filaments of the lucinid Codakia orbiculata (Montagu, 1808) (Mollusca: Bivalvia) during bacterial decolonization and recolonization.

    PubMed

    Elisabeth, Nathalie H; Gustave, Sylvie D D; Gros, Olivier

    2012-08-01

    The shallow-water bivalve Codakia orbiculata which harbors gill-endosymbiotic sulfur-oxidizing γ-proteobacteria can lose and acquire its endosymbionts throughout its life. Long-term starvation and recolonization experiments led to changes in the organization of cells in the lateral zone of gill filaments. This plasticity is linked to the presence or absence of gill-endosymbionts. Herein, we propose that this reorganization can be explained by three hypotheses: (a) a variation in the number of bacteriocytes and granule cells due to proliferation or apoptosis processes, (b) a variation of the volume of these two cell types without modification in the number, and (c) a combination of both number and cell volume variation. To test these hypotheses, we analyzed cell reorganization in terms of proliferation and apoptosis in adults submitted to starvation and returned to the field using catalyzed reporter deposition fluorescence in situ hybridization, immunohistochemistry, and structural analyses. We observed that cell and tissue reorganization in gills filaments is due to a variation in cell relative abundance that maybe associated with a variation in cell apparent volume and depends on the environment. In fact, bacteriocytes mostly multiply in freshly collected and newly recolonized individuals, and excess bacteriocytes are eliminated in later recolonization stages. We highlight that host tissue regeneration in gill filaments of this symbiotic bivalve can occur by both replication of existing cells and division of undifferentiated cells localized in tissular bridges, which might be a tissue-specific multipotent stem cell zone. Copyright © 2012 Wiley Periodicals, Inc.

  7. Large Vesicomyidae (Mollusca: Bivalvia) from cold seeps in the Gulf of Guinea off the coasts of Gabon, Congo and northern Angola

    NASA Astrophysics Data System (ADS)

    von Cosel, Rudo; Olu, Karine

    2009-12-01

    Two new genera and three new species of large Vesicomyidae are described from cold-seep sites on pockmarks and other sulfide-rich environments in the Gulf of Guinea (tropical east Atlantic) off Gabon, Congo (Brazzaville) and northern Angola, from 500 to 4000 m depth: " Calyptogena" (s.l.) regab n. sp., Wareniconcha (n.g.) guineensis (Thiele and Jaeckel 1931), Elenaconcha guiness n.g. n. sp., and Isorropodon atalantae n. sp. For two other species already taken by the R/V Valdivia in 1898, Calyptogena valdiviae (Thiele and Jaeckel 1931) and Isorropodon striatum (Thiele and Jaeckel 1931) new localities were discovered, and the species are rediscussed. E. guiness n.g. n.sp. is also recorded from off Banc d'Arguin, Mauritania, collected by commercial fishing vessels. The vesicomyid species here treated were encountered in different depth ranges along the Gabon-Congo-Angola margin, between 500 and 4000 m depth, and it was found that, in comparison with the dredge samples taken by the Valdivia expedition off southern Cameroon and off Rio de Oro (both at 2500 m), the same species occur in other depth ranges, in some cases with a vertical difference of more than 1000 m. .That means that the species are not confined to a given depth thought being typical for them and that the characteristics of the biotope are likely to play a major role in the distribution of the vesicomyids associated to cold seeps or other reduced environments along the West African margin.

  8. Characterisation of 12 microsatellite loci in the Vietnamese commercial clam Lutraria rhynchaena Jonas 1844 (Heterodonta: Bivalvia: Mactridae) through next-generation sequencing.

    PubMed

    Thai, Binh Thanh; Tan, Mun Hua; Lee, Yin Peng; Gan, Han Ming; Tran, Trang Thi; Austin, Christopher M

    2016-05-01

    The marine clam Lutraria rhynchaena is gaining popularity as an aquaculture species in Asia. Lutraria populations are present in the wild throughout Vietnam and several stocks have been established and translocated for breeding and aquaculture grow-out purposes. In this study, we demonstrate the feasibility of utilising Illumina next-generation sequencing technology to streamline the identification and genotyping of microsatellite loci from this clam species. Based on an initial partial genome scan, 48 microsatellite markers with similar melting temperatures were identified and characterised. The 12 most suitable polymorphic loci were then genotyped using 51 individuals from a population in Quang Ninh Province, North Vietnam. Genetic variation was low (mean number of alleles per locus = 2.6; mean expected heterozygosity = 0.41). Two loci showed significant deviation from Hardy-Weinberg equilibrium (HWE) and the presence of null alleles, but there was no evidence of linkage disequilibrium among loci. Three additional populations were screened (n = 7-36) to test the geographic utility of the 12 loci, which revealed 100 % successful genotyping in two populations from central Vietnam (Nha Trang). However, a second population from north Vietnam (Co To) could not be successfully genotyped and morphological evidence and mitochondrial variation suggests that this population represents a cryptic species of Lutraria. Comparisons of the Qang Ninh and Nha Trang populations, excluding the 2 loci out of HWE, revealed statistically significant allelic variation at 4 loci. We reported the first microsatellite loci set for the marine clam Lutraria rhynchaena and demonstrated its potential in differentiating clam populations. Additionally, a cryptic species population of Lutraria rhynchaena was identified during initial loci development, underscoring the overlooked diversity of marine clam species in Vietnam and the need to genetically characterise population representatives prior to microsatellite development. The rapid identification and validation of microsatellite loci using next-generation sequencing technology warrant its integration into future microsatellite loci development for key aquaculture species in Vietnam and more generally, aquaculture countries in the South East Asia region.

  9. Growth, Survival and Reproduction of the Giant Clam Tridacna maxima (Röding 1798, Bivalvia) in Two Contrasting Lagoons in French Polynesia

    PubMed Central

    Van Wynsberge, Simon; Andréfouët, Serge; Gaertner-Mazouni, Nabila; Wabnitz, Colette C. C.; Menoud, Mathilde; Le Moullac, Gilles; Levy, Peva; Gilbert, Antoine; Remoissenet, Georges

    2017-01-01

    Shell growth, reproduction, and natural mortality of the giant clam Tridacna maxima were characterized over a two-year-period in the lagoon of the high island of Tubuai (Austral Archipelago) and in the semi-closed lagoon of Tatakoto (Tuamotu Archipelago) in French Polynesia. We also recorded temperature, water level, tidal slope, tidal range, and mean wave height in both lagoons. Lower lagoon aperture and exposure to oceanic swells at Tatakoto than at Tubuai was responsible for lower lagoon water renewal, as well as higher variability in temperature and water level at Tatakoto across the studied period. These different environmental conditions had an impact on giant clams. Firstly, spawning events in the lagoon of Tatakoto, detected by gonad maturity indices in June and July 2014, were timed with high oceanic water inflow and a decrease in lagoon water temperature. Secondly, temperature explained differences in shell growth rates between seasons and lagoons, generating different growth curves for the two sites. Thirdly, local mortality rates were also found to likely be related to water renewal patterns. In conclusion, our study suggests that reef aperture and lagoon water renewal rates play an integral role in giant clam life history, with significant differences in rates of shell growth, mortality and fertility found between open versus semi-closed atoll lagoons in coral reef ecosystems. PMID:28118406

  10. MetaSINEs: Broad Distribution of a Novel SINE Superfamily in Animals.

    PubMed

    Nishihara, Hidenori; Plazzi, Federico; Passamonti, Marco; Okada, Norihiro

    2016-02-12

    SINEs (short interspersed elements) are transposable elements that typically originate independently in each taxonomic clade (order/family). However, some SINE families share a highly similar central sequence and are thus categorized as a SINE superfamily. Although only four SINE superfamilies (CORE-SINEs, V-SINEs, DeuSINEs, and Ceph-SINEs) have been reported so far, it is expected that new SINE superfamilies would be discovered by deep exploration of new SINEs in metazoan genomes. Here we describe 15 SINEs, among which 13 are novel, that have a similar 66-bp central region and therefore constitute a new SINE superfamily, MetaSINEs. MetaSINEs are distributed from fish to cnidarians, suggesting their common evolutionary origin at least 640 Ma. Because the 3' tails of MetaSINEs are variable, these SINEs most likely survived by changing their partner long interspersed elements for retrotransposition during evolution. Furthermore, we examined the presence of members of other SINE superfamilies in bivalve genomes and characterized eight new SINEs belonging to the CORE-SINEs, V-SINEs, and DeuSINEs, in addition to the MetaSINEs. The broad distribution of bivalve SINEs suggests that at least three SINEs originated in the common ancestor of Bivalvia. Our comparative analysis of the central domains of the SINEs revealed that, in each superfamily, only a restricted region is shared among all of its members. Because the functions of the central domains of the SINE superfamilies remain unknown, such structural information of SINE superfamilies will be useful for future experimental and comparative analyses to reveal why they have been retained in metazoan genomes during evolution. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  11. Microbial Diseases of Bivalve Mollusks: Infections, Immunology and Antimicrobial Defense.

    PubMed

    Zannella, Carla; Mosca, Francesco; Mariani, Francesca; Franci, Gianluigi; Folliero, Veronica; Galdiero, Marilena; Tiscar, Pietro Giorgio; Galdiero, Massimiliano

    2017-06-17

    A variety of bivalve mollusks (phylum Mollusca, class Bivalvia) constitute a prominent commodity in fisheries and aquacultures, but are also crucial in order to preserve our ecosystem's complexity and function. Bivalve mollusks, such as clams, mussels, oysters and scallops, are relevant bred species, and their global farming maintains a high incremental annual growth rate, representing a considerable proportion of the overall fishery activities. Bivalve mollusks are filter feeders; therefore by filtering a great quantity of water, they may bioaccumulate in their tissues a high number of microorganisms that can be considered infectious for humans and higher vertebrates. Moreover, since some pathogens are also able to infect bivalve mollusks, they are a threat for the entire mollusk farming industry. In consideration of the leading role in aquaculture and the growing financial importance of bivalve farming, much interest has been recently devoted to investigate the pathogenesis of infectious diseases of these mollusks in order to be prepared for public health emergencies and to avoid dreadful income losses. Several bacterial and viral pathogens will be described herein. Despite the minor complexity of the organization of the immune system of bivalves, compared to mammalian immune systems, a precise description of the different mechanisms that induce its activation and functioning is still missing. In the present review, a substantial consideration will be devoted in outlining the immune responses of bivalves and their repertoire of immune cells. Finally, we will focus on the description of antimicrobial peptides that have been identified and characterized in bivalve mollusks. Their structural and antimicrobial features are also of great interest for the biotechnology sector as antimicrobial templates to combat the increasing antibiotic-resistance of different pathogenic bacteria that plague the human population all over the world.

  12. Environmental heterogeneity predicts species richness of freshwater mollusks in sub-Saharan Africa

    NASA Astrophysics Data System (ADS)

    Hauffe, T.; Schultheiß, R.; Van Bocxlaer, B.; Prömmel, K.; Albrecht, C.

    2016-09-01

    Species diversity and how it is structured on a continental scale is influenced by stochastic, ecological, and evolutionary driving forces, but hypotheses on determining factors have been mainly examined for terrestrial and marine organisms. The extant diversity of African freshwater mollusks is in general well assessed to facilitate conservation strategies and because of the medical importance of several taxa as intermediate hosts for tropical parasites. This historical accumulation of knowledge has, however, not resulted in substantial macroecological studies on the spatial distribution of freshwater mollusks. Here, we use continental distribution data and a recently developed method of random and cohesive allocation of species distribution ranges to test the relative importance of various factors in shaping species richness of Bivalvia and Gastropoda. We show that the mid-domain effect, that is, a hump-shaped richness gradient in a geographically bounded system despite the absence of environmental gradients, plays a minor role in determining species richness of freshwater mollusks in sub-Saharan Africa. The western branch of the East African Rift System was included as dispersal barrier in richness models, but these simulation results did not fit observed diversity patterns significantly better than models where this effect was not included, which suggests that the rift has played a more complex role in generating diversity patterns. Present-day precipitation and temperature explain richness patterns better than Eemian climatic condition. Therefore, the availability of water and energy for primary productivity during the past does not influence current species richness patterns much, and observed diversity patterns appear to be in equilibrium with contemporary climate. The availability of surface waters was the best predictor of bivalve and gastropod richness. Our data indicate that habitat diversity causes the observed species-area relationship, and hence, that

  13. Mesozooplankton community development at elevated CO2 concentrations: results from a mesocosm experiment in an Arctic fjord

    NASA Astrophysics Data System (ADS)

    Niehoff, B.; Schmithüsen, T.; Knüppel, N.; Daase, M.; Czerny, J.; Boxhammer, T.

    2013-03-01

    The increasing CO2 concentration in the atmosphere caused by burning fossil fuels leads to increasing pCO2 and decreasing pH in the world ocean. These changes may have severe consequences for marine biota, especially in cold-water ecosystems due to higher solubility of CO2. However, studies on the response of mesozooplankton communities to elevated CO2 are still lacking. In order to test whether abundance and taxonomic composition change with pCO2, we have sampled nine mesocosms, which were deployed in Kongsfjorden, an Arctic fjord at Svalbard, and were adjusted to eight CO2 concentrations, initially ranging from 185 μatm to 1420 μatm. Vertical net hauls were taken weekly over about one month with an Apstein net (55 μm mesh size) in all mesocosms and the surrounding fjord. In addition, sediment trap samples, taken every second day in the mesocosms, were analysed to account for losses due to vertical migration and mortality. The taxonomic analysis revealed that meroplanktonic larvae (Cirripedia, Polychaeta, Bivalvia, Gastropoda, and Decapoda) dominated in the mesocosms while copepods (Calanus spp., Oithona similis, Acartia longiremis and Microsetella norvegica) were found in lower abundances. In the fjord copepods prevailed for most of our study. With time, abundance and taxonomic composition developed similarly in all mesocosms and the pCO2 had no significant effect on the overall community structure. Also, we did not find significant relationships between the pCO2 level and the abundance of single taxa. Changes in heterogeneous communities are, however, difficult to detect, and the exposure to elevated pCO2 was relatively short. We therefore suggest that future mesocosm experiments should be run for longer periods.

  14. Fine morphology of the jaw apparatus of Puncturella noachina (Fissurellidae, Vetigastropoda).

    PubMed

    Vortsepneva, Elena; Ivanov, Dmitry; Purschke, Günter; Tzetlin, Alexander

    2014-07-01

    Jaws of various kinds occur in virtually all groups of Mollusca, except for Polyplacophora and Bivalvia. Molluscan jaws are formed by the buccal epithelium and either constitute a single plate, a paired formation or a serial structure. Buccal ectodermal structures in gastropods are rather different. They can be nonrenewable or having final growth, like the hooks in Clione (Gastropoda, Gymnosomata). In this case, they are formed by a single cell. Conversely, they can be renewable during the entire life span and in this case they are formed by a set of cells, like the formation of the radula. The fine structure of the jaws was studied in the gastropod Puncturella noachina. The jaw is situated in the buccal cavity and consists of paired elongated cuticular plates. On the anterior edge of each cuticular plate there are numerous longitudinally oriented rodlets disposed over the entire jaw surface and immersed into a cuticular matrix. The jaw can be divided into four zones situated successively toward the anterior edge: 1) the posterior area: the zone of formation of the thick cuticle covering the entire jaw and forming the electron-dense outer layer of the jaw plate; 2) the zone of rodlet formation; 3) the zone of rodlet arrangement; and 4) the anterior zone: the free scraping edge of the plate, or the erosion zone. In the general pattern of jaw formation, Puncturella noachina resembles Testudinalia tessulata (Patellogastropoda) studied previously. The basis of the jaw is a cuticular plate formed by the activity of the strongly developed microvillar apparatus of the gnathoepithelium. However, the mechanism of renewal of the jaw anterior part in P. noachina is much more complex as its scraping edge consists not just of a thick cuticular matrix rather than of a system of denticles being the projecting endings of rodlets. © 2014 Wiley Periodicals, Inc.

  15. The Purisima Formation at Capitola Beach, Santa Cruz County, CA: A Deeper Examination of Pliocene Fossils

    NASA Astrophysics Data System (ADS)

    White, L. D.; Brooks, K.; Chen, R.; Chen, T.; James, T.; Gonzales, J.; Schumaker, D.; Williams, D.

    2005-12-01

    Fossil samples from the Pliocene Purisima Formation at Capitola Beach in Santa Cruz County, CA were collected in July-August 2005. The Purisima Formation composes the bulk of the cliffs exposed at Capitola Beach and a rich assemblage of well-preserved fossils occur in gray to brown sandstone and siltstone. Erosion of the cliff face averages 0.3 meter/year and fresh cliff falls in the winter and spring months of 2005 provided an excellent opportunity to resample the Capitola Beach section of the Purisima Formation previously documented by Perry (1988). Organisms were identified from information in Perry (1988) and were compared with collections at the California Academy of Sciences. The most abundant fossils found are from the phylum Mollusca, classes Bivalvia and Gastropoda. Abundant bivalve taxa are: Anadara trilineata, Clinocardium meekianum, Macoma sp., Protothaca staleyi, and Tresus pajaroanus. Also common are the gastropods, Calyptraea fastigata, Crepdiula princeps, Mitrella gausapata, Nassarius grammatus, Nassarius californianus, Natica clausa, and Olivella pedroana. Less common invertebrate fossils are from the phylum Echinodermata ( Dendraster sp., the extinct fossil sand dollar) and from the phylum Arthropoda ( Crustacea), crab fragments ( Cancer) and barnacles ( Balanus). Because numerous fossils are concentrated as fragments in shell beds, Norris (1986) and Perry (1988) believe many were redeposited as storm beds during strong current events that promoted rapid burial. In contrast, whale and other vertebrate bones are common in certain horizons and their presence may be related to the conditions that promoted phosphate mineralization, such as episodes of low sedimentation rates and prolonged exposure on the seafloor (Föllmi and Garrison, 1991). The bone beds, together with the rich infaunal and epifaunal invertebrate assemblages, represent a community of invertebrate organisms that thrived in a shallow marine sea during the Pliocene epoch, approximately

  16. Temporal and spatial distribution of the meiobenthic community in Daya Bay, South China Sea

    NASA Astrophysics Data System (ADS)

    Tang, L.; Li, H. X.; Yan, Y.

    2012-04-01

    Spatial and temporal biodiversity patterns of the meiobenthos were studied for the first time in Daya Bay, which is a tropical semi-enclosed basin located in the South China Sea. The abundance, biomass, and composition of the meiobenthos and the basic environmental factors in the bay were investigated. The following 19 taxonomic groups were represented in the meiofauna: Nematoda, Copepoda, Polychaeta, Oligochaeta, Kinorhyncha, Gastrotricha, Ostracoda, Bivalvia, Turbellaria, Nemertinea, Sipuncula, Hydroida, Amphipoda, Cumacea, Halacaroidea, Priapulida, Echinodermata, Tanaidacea, and Rotifera. Total abundance and biomass of the meiobenthos showed great spatial and temporal variation, with mean values of 993.57 ± 455.36 ind cm-2 and 690.51 ± 210.64 μg 10 cm-2, respectively. Nematodes constituted 95.60 % of the total abundance and thus had the greatest effect on meiofauna quantity and distribution, followed by copepods (1.55 %) and polychaetes (1.39 %). Meiobenthos abundance was significantly negatively correlated with water depth at stations (r=-0.747, P<0.05) and significantly negatively correlated with silt-clay content (r=-0.516, P<0.01) and medium diameter (r=-0.499, P<0.01) of the sediment. Similar results were found for correlations of biomass and abundance of nematodes with environmental parameters. Polychaete abundance was positively correlated with the bottom water temperature (r=0.456, P<0.01). Meiobenthos abundance differed significantly among seasons (P<0.05), although no significant difference among stations and the interaction of station × season was detected by two-way ANOVA. In terms of vertical distribution, most of the meiobenthos was found in the surface layer of sediment. This pattern was apparent for nematodes and copepods, but a vertical distribution pattern for polychaetes was not as obvious. Based on the biotic indices and analyses of their correlations and variance, the diversity of this community was likely to be influenced by

  17. Quantification of diagenetic overprint processes deduced from fossil carbonate shells and laboratory-based hydrothermal alteration experiments

    NASA Astrophysics Data System (ADS)

    Griesshaber, Erika; Casella, Laura; Mavromatis, Vasileios; Dietzel, Martin; Immenhauser, Adrian; Schmahl, Wolfgang

    2016-04-01

    Benthic and nektonic marine biogenic carbonate archives represent the foundation of numerous studies aiming at reconstructions of past climate dynamics and environmental change. However, living organisms are not in thermodynamic equilibrium and create local chemical environments where physiologic processes such as biomineralization takes place. After the death of the organism the former physiologic disequilibrium conditions are not sustained any more and all biological tissues are altered by equilibration according to the surrounding environment: diagenesis. With increasing diagenetic alteration, the biogenic structure and fingerprint fades away and is replaced by inorganic features. Thus, recrystallization of organism-specific microstructure is a clear indicator for diagenetic overprint. Microstructural data, which mirror recrystallization, are of great value for interpreting geochemical proxies for paleo-environment reconstruction. Despite more than a century of research dealing with carbonate diagenesis, many of the controlling processes and factors are only understood in a qualitative manner. One of the main issues is that diagenetically altered carbonates are usually present as the product of a complex preceding diagenetic pathway with an unknown number of intermediate steps. In this contribution we present and discuss laboratory based alteration experiments with the aim to investigate time-series data sets in a controlled manner. We conducted hydrothermal alteration experiments with modern Arctica islandica (bivalvia) and Notosaria nigricans (brachiopoda) in order to mimic diagenetic overprint. We explore first the potential of electron backscattered diffraction (EBSD) measurements together with statistical data evaluation as a tool to quantify diagenetic alteration of carbonate skeletons. Subsequently, we compare microstructural patterns obtained from experimentally altered shell material with those of fossil specimens that have undergone variable degrees of

  18. Diet of Norwegian coastal cod (Gadus morhua) studied by using citizen science

    NASA Astrophysics Data System (ADS)

    Enoksen, Siri Elise; Reiss, Henning

    2018-04-01

    The Norwegian coastal cod (Gadus morhua) is a keystone species in the food web of northern Norwegian fjords. Their relatively stationary populations might specifically depend on local food resources, but the diet of cod has rarely been studied in fjord systems. Using a citizen science approach, where recreational anglers and tourists participated in the sampling, we studied small-scale differences in the diet composition of cod in a fjord system in northern Norway. We compared the cod diet from the MPA Saltstraumen, characterised by strong tidal currents and a highly diverse and abundant fauna, with the inner fjord area of Skjerstadfjord. The diet composition of cod significantly differed between both areas within the fjord. Although fish was the dominant prey in both areas, cod consumed > 40% invertebrates in terms of weight, even in the cod size class of 70-99 cm. The invertebrate prey also caused the observed spatial differences. In Saltstraumen, brittle stars (Ophiuroidea), crabs (Brachyura) and sea cucumbers (Holothuroidea) were important food sources for cod, while sea urchins (Echinoidea), clams (Bivalvia), shrimps (Caridea) and krill (Euphausiacea) dominated the diet in the inner Skjerstadfjord. The high densities of sessile fauna in the dynamic environment of Saltstraumen, was only partly reflected in the diet of cod, with only Holothuroidea found in 17% of the stomachs. High rates of empty stomachs (24%), cannibalism as well as a higher proportion of low-energy prey in the diet of large cod, may indicate a shortage of high quality food in Skjerstadfjord. The samples for this study were collected through a citizen science campaign. This approach might provide opportunities to be used for coastal ecological monitoring with potential applications in local ecosystem management strategies through public involvement.

  19. Seasonality of bottom water temperature in the northern North Sea reconstructed from the oxygen isotope composition of the bivalve Arctica islandica

    NASA Astrophysics Data System (ADS)

    Trofimova, Tamara; Andersson, Carin; Bonitz, Fabian

    2017-04-01

    The seasonality of temperature changes is an important characteristic of climate. However, observational data for the ocean are only available for the last 150 year from a limited number of locations. Prior to 18th century information is only available from proxy reconstructions. The vast majority of such reconstructions depend on land-based archives, primarily from dendrochronology. Established marine proxy records for the ocean, especially at high latitudes, are both sparsely distributed and poorly resolved in time. Therefore, the identification and development of proxies for studying key ocean processes at sub-annual resolution that can extend the marine instrumental record is a clear priority in marine climate science. In this study, we have developed a record of early Holocene seasonal variability of bottom water temperature from the Viking Bank in the northern most North Sea. This area is of a particular interest since the hydrography is controlled by the inflow of Atlantic water. The reconstruction is based on the oxygen isotope composition of the growth increments in two sub-fossil shells of Arctica islandica (Bivalvia), dated to 9600-9335 cal. yr BP. By combining radiocarbon dating and sclerochronological techniques a floating chronology spanning over 200 years was constructed. Using the chronology as an age model, oxygen isotope measurements from 2 shells were combined into a 22-years long record. The results from this oxygen isotope record are compared with stable oxygen isotope profiles from modern shells to estimate changes in the mean state and seasonality between present and early Holocene. Shell-derived oxygen isotope values together with ice-volume corrected oxygen isotope values for the seawater were used to calculate bottom-water temperatures on a sub-annual time-scale. Preliminary results of the reconstructed early Holocene bottom water temperature indicate higher seasonality and lower minimum temperature compared to the present.

  20. Spatial patterns of mesozooplankton communities in the Northwestern Iberian shelf during autumn shaped by key environmental factors

    NASA Astrophysics Data System (ADS)

    Domínguez, Rula; Garrido, Susana; Santos, A. Miguel P.; dos Santos, Antonina

    2017-11-01

    The autumn mesozooplankton community structure and spatial distribution was investigated in relation to the prevalent hydrographic conditions at the Northwestern Iberian shelf (38.5°-41.6°N), a major spawning ground for small pelagic fish species. Copepods clearly dominated the mesozooplankton community, followed by Cladocera, Appendicularia, Cirripedia, Bivalvia larvae and Chaetognata. Three different groups were identified according to their distribution: a northern coastal group (A), a southern coastal group with two stations in the northern area (B), and a shelf group (C), each delimited to areas with distinct oceanographic conditions. The boundary between the coastal groups A and B was coincident with areas of prominent geographic features, particularly a submarine canyon (Nazaré canyon) and a cape (Cabo Carvoeiro), both inducing abrupt changes in the local/regional patterns of water mass circulation. Group B includes a few northern stations that can be related to river discharges while the southern stations can be defined by upwelling conditions at that time. The distribution of some relevant species can be related to biophysical variables (temperature, salinity, Chlorophyll a). Some copepod taxa were generally coincident with high concentrations of chlorophyll a abundance (e.g. Temora spp., Oncaea spp.), while the distribution of other groups such as Cladocera or bivalve veliger larvae was correlated to temperature and/or salinity gradients caused by river discharges. Other important taxa as Paracalanus and Clausocalanus spp. or Oithona spp. showed no particular influence of any of the measured hydrological variables. This work is the first description of mesozooplankton assemblages and their distribution pattern in a broad area off Western Iberia during autumn. It contributes to understanding the dynamics of zooplankton in the area, increasing the knowledge of the drivers of plankton community variability and providing information about their potential

  1. Macrobenthic molluscs from a marine - lagoonal environmental transition in Lesvos Island (Greece).

    PubMed

    Evagelopoulos, Athanasios; Koutsoubas, Drosos; Gerovasileiou, Vasilis; Katsiaras, Nikolaos

    2016-01-01

    This paper describes an occurence dataset, also including numerical abundance and biomass data, pertaining to the macrobenthic molluscan assemblages from a marine - lagoonal environmental transition. The study system was the soft-substrate benthoscape of the area of the Kalloni solar saltworks (Lesvos Island, Greece). Specifically, the study area extended from the infralittoral zone of the inner Kalloni Gulf (marine habitat) to the bottoms of the first two evaporation ponds of the Kalloni solar saltworks (lagoonal habitat). Bottom sediment samples (3 replicates) were collected with a Van Veen grab sampler (0.1 m 2 ) at four sampling sites, along a 1.5 km long line transect that spanned the marine - lagoonal environmental transition. A total of four surveys were carried out seasonally in 2004.  A total of 39,345 molluscan individuals were sorted out of the sediment samples and were identified to 71 species, belonging to the Gastropoda (36), Bivalvia (34) and Scaphopoda (1) classes. Numerical abundance and wet biomass (with shells) data are included in the dataset. The dataset described in the present paper partially fills a significant gap in the scientific literature: Because ecological research of coastal lagoons has seldom explicitly considered the marine - lagoonal habitats interface, there are no openly accessible datasets pertaining to the particular structural component of the transitional waters benthoscapes of the Mediterranean Sea. Such datasets could prove valuable in the research of the structure and functioning of transitional waters benthoscapes. The present dataset is available as a supplementary file (Suppl. material 1) and can also be accessed at http://ipt.medobis.eu/resource?r=kalloni_saltworks_phd.

  2. Planktivory by alewife (Alosa pseudoharengus) and rainbow smelt (Osmerus mordax) on microcrustacean zooplankton and dreissenid (Bivalvia: Dreissenidae) veligers in southern Lake Ontario

    USGS Publications Warehouse

    Mills, Edward L.; O'Gorman, Robert; Roseman, Edward F.; Adams, Connie; Owens, Randall W.

    1995-01-01

    The objective of this study was to describe the diet of young-of-the-year and adult alewife (Alosa pseudoharengus) and rainbow smelt (Osmerus mordax) in nearshore waters coincident with the colonization of Lake Ontario by Dreissena. Laboratory experiments and field observations indicated that alewife and rainbow smelt consumed dreissenid veligers and that the veligers remained intact and identifiable in the digestive tract for several hours. Dreissenid larvae were found in field-caught alewife and rainbow smelt in August 1992, even though veliger densities were low (<0.1/L). Zooplankton dominated the diet of all fish and veliger larvae were <0.1% of the biomass of prey eaten by these fish. Density of veligers and the distribution of settled dreissenids declined from west to east along the south shore of Lake Ontario. Based on veliger consumption rates we measured and the abundance of veligers and planktivores, we conclude that planktivory by alewife and smelt in the nearshore waters of Lake Ontario did not substantially reduce the number of veligers during 1991–1993. However, our results indicate that if the density of veligers in Lake Ontario decreases, and if planktivores remain abundant, planktivory on veliger populations could be significant.

  3. Megafauna recovered from a cold hydrocarbon seep in the deep Alaskan Beaufort Sea, including a new species of Axinus (Thracidae: Bivalvia: Mollusca)

    NASA Astrophysics Data System (ADS)

    Powell, C. L.; Valentich-Scott, P.; Lorenson, T. D.; Edwards, B. D.

    2011-12-01

    Several specimens of a new species of Axinus and a single well-worn gastropod columella provisionally assigned to the genus Neptunea (Buccinidae: Gastropoda: Mollusca) were recently recovered from at least two cores, the longest of which is 5.72 m long, from a large seafloor mound, informally named the Canning Seafloor Mound (CSM). The CSM is located at 2,530 m water depth on the Alaskan Beaufort Sea slope north of Camden Bay and is a fluid explosion feature containing methane hydrate and methane-saturated sediments overlying a folded and faulted deep basin. Only two modern species of Axinus are currently known. Axinus grandis (Verrill & Smith, 1885) is a northern Atlantic species and the recently described species, A. cascadiensis Oliver and Holmes (2007), is only known from Baby Bare Seamount, Cascadia Basin, northeastern Pacific Ocean. Common fragments, single valves, and a single articulated specimen represent this new Axinus species. These shells were distributed over nearly the entire length of the primary core. All specimens show wear and (or) dissolution. The age of these specimens is unknown and no living representatives were encountered. The genus Axinus has a fossil record back to the early Eocene in England and the Paleocene and Eocene in Egypt. Biogeographically the genus appears to have originated in the Tethys Sea and became established in the Atlantic Ocean during the Eocene, spreading across the Arctic Ocean in the late Tertiary. With the opening of the Bering Strait in the latest Miocene or early Pliocene the genus Axinus migrated southwest into the northeast Pacific. Interestingly, hydrocarbon seep deposits are also present on the adjacent North Slope of Alaska in the Marsh Anticline at Carter Creek, Camden Bay. These rocks, the Nuwok beds, contain abundant Thracidae bivalve of the genus Thracia, but not Axinus, however the rocks also represent cold seep deposits. These rocks have been variously dated from Oligocene to Pliocene and the exact age remains uncertain. Neptunea are a predatory snails well represented in the earliest Miocene to Holocene of the northern Pacific Ocean and in the late Pliocene to Holocene of the northern Atlantic. The presence of Neptunea at CSM, if identified properly, gives a maximum age for these deposits of latest Miocene or early Pliocene, after the opening of the Bering Strait, although they could be as young as Holocene.

  4. Reproductive traits of the symbiotic pea crab Austinotheres angelicus (Crustacea, Pinnotheridae) living in Saccostrea palmula (Bivalvia, Ostreidae), Pacific coast of Costa Rica

    PubMed Central

    Salas-Moya, Carolina; Mena, Sebastián; Wehrtmann, Ingo S.

    2014-01-01

    Abstract Pea crabs of the family Pinnotheridae exhibit a symbiotic life style and live associated with a variety of different marine organisms, especially bivalves. Despite the fact that pea crabs can cause serious problems in bivalve aquaculture, the available information about the ecology of these crabs from Central America is extremely limited. Therefore, the present study aimed to describe different reproductive features of the pinnotherid crab Austinotheres angelicus associated with the oyster Saccostrea palmula in the Golfo de Nicoya, Pacific coast of Costa Rica. Monthly sampling was conducted from April to December 2012. Average carapace width (CW) of the 47 analyzed ovigerous females was 7.62 mm. The species produced on average 2677 ± 1754 recently -extruded embryos with an average volume of 0.020 ± 0.003 mm3; embryo volume increased during embryogenesis by 21%, but did not vary significantly between developmental stages. Brood mass volume varied greatly (between 11.7 and 236.7 mm3), and increased significantly with female CW. Females invested on average 76.7% (minimum: 21.7%; maximum: 162.8%) of their body weight in brood production, which confirms a substantially higher energy allocation for embryo production in pinnotherid crabs compared to free-living decapods. PMID:25561840

  5. Intra-specific variability in life-history traits of Anadara tuberculosa (Mollusca: Bivalvia) in the mangrove ecosystem of the Southern coast of Ecuador.

    PubMed

    Flores, Luis; Licandeo, Roberto; Cubillos, Luis A; Mora, Elba

    2014-06-01

    Anadara tuberculosa is one of the most important bivalves along the Western Pacific coast because of its commercial value. Nevertheless, the variability in growth, long-life span, natural mortality and reproductive parameters of this mangrove cockle has not yet been described. The aim of this study was to analyze these life-history traits in three areas of the Southern coast of Ecuador. Empirical and length-based methods were used to estimate these biological parameters. Body size data were collected from the commercial fishery between 2004 and 2011 in landing ports near to the Archipelago of Jambeli [Puerto Bolivar (PB), Puerto Jeli (PJ) and Puerto Hualtaco (PH)]. The von Bertalanffy growth parameters for combined sex were estimated between 70.87 to 93.45mm for L(infinity) and 0.22 to 0.80/year for k. The growth indices (PHI') ranged from 3.17 to 3.85, while the overall growth performance (OGP) ranged from 5.03 to 5.82. The mean of long-life span (t(max)), size and age at maturity (L50% and t50%) were estimated in 7.71 +/- 2.53 years, 39.13 +/- 2.24mm and 1.46 +/- 0.56 years for PB; 9.51 +/- 2.85 years, 37.78 +/- 1.95mm and 1.37 +/- 0.41 years for PJ and 5.81 +/- 2.11 years, 39.73 +/- 3.31mm and 0.94 +/- 0.41 years for PH. Natural mortality (M) ranged from 0.46 to 1.28/year. We concluded that significant intra-specific variation was observed in a temporal scale in PHI' and OGP indices as well as L50% and M. Therefore, temporal changes in these life-history traits should be taken into account when assessing the status of the mangrove cockle fishery.

  6. Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)

    NASA Astrophysics Data System (ADS)

    Lasota, Rafal; Pierscieniak, Karolina; Garcia, Pascale; Simon-Bouhet, Benoit; Wolowicz, Maciej

    2016-11-01

    The aim of the study was to determine genetic diversity in the soft-shell clam Mya arenaria on a wide geographical scale using mtDNA COI gene sequences. Low levels of genetic diversity was found, which can most likely be explained by a bottleneck effect during Pleistocene glaciations and/or selection. The geographical genetic structuring of the studied populations was also very low. The star-like phylogeny of the haplotypes indicates a relatively recent, rapid population expansion following the glaciation period and repeated expansion following the founder effect(s) after the initial introduction of the soft-shell clam to Europe. North American populations are characterized by the largest number of haplotypes, including rare ones, as expected for native populations. Because of the founder effect connected with initial and repeated expansion events, European populations have significantly lower numbers of haplotypes in comparison with those of North America. We also observed subtle differentiations among populations from the North and Baltic seas. The recently founded soft-shell clam population in the Black Sea exhibited the highest genetic similarity to Baltic populations, which confirmed the hypothesis that M. arenaria was introduced to the Gulf of Odessa from the Baltic Sea. The most enigmatic results were obtained for populations from the White Sea, which were characterized by high genetic affinity with American populations.

  7. Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae).

    PubMed

    Distel, Daniel L; Morrill, Wendy; MacLaren-Toussaint, Noelle; Franks, Dianna; Waterbury, John

    2002-11-01

    A cellulolytic, dinitrogen-fixing bacterium isolated from the gill tissue of a wood-boring mollusc (shipworm) Lyrodus pedicellatus of the bivalve family Teredinidae and 58 additional strains with similar properties, isolated from gills of 24 bivalve species representing 9 of 14 genera of Teredinidae, are described. The cells are Gram-negative, rigid, rods (0.4-0.6 x 3-6 microm) that bear a single polar flagellum. All isolates are capable of chemoheterotrophic growth in a simple mineral medium supplemented with cellulose as a sole source of carbon and energy. Xylan, pectin, carboxymethylcellulose, cellobiose and a variety of sugars and organic acids also support growth. Growth requires addition of combined nitrogen when cultures are vigorously aerated, but all isolates fix dinitrogen under microaerobic conditions. The pH, temperature and salinity optima for growth were determined for six isolates and are approximately 8.5, 30-35 degrees C and 0.3 M NaCl respectively. The isolates are marine. In addition to NaCl, growth requires elevated concentrations of Ca2+ and Mg2+ that reflect the chemistry of seawater. The DNA G+C content ranged from 49 to 51 mol%. Four isolates were identical with respect to small-subunit rRNA sequence over 891 positions compared and fall within a unique clade in the gamma-subclass of the Proteobacteria. Based on morphological, physiological and phylogenetic characteristics and specific symbiotic association with teredinid bivalves, a new genus and species, Teredinibacter turnerae gen. nov., sp. nov., is proposed. The type strain is T7902(T) (= ATCC 39867(T) = DSM 15152(T)).

  8. Combined Use of Morphological and Molecular Tools to Resolve Species Mis-Identifications in the Bivalvia The Case of Glycymeris glycymeris and G. pilosa

    PubMed Central

    Holmes, Anna; Bušelić, Ivana; Thébault, Julien; Featherstone, Amy

    2016-01-01

    Morphological and molecular tools were combined to resolve the misidentification between Glycymeris glycymeris and Glycymeris pilosa from Atlantic and Mediterranean populations. The ambiguous literature on the taxonomic status of these species requires this confirmation as a baseline to studies on their ecology and sclerochronology. We used classical and landmark-based morphometric approaches and performed bivariate and multivariate analyses to test for shell character interactions at the individual and population level. Both approaches generated complementary information. The former showed the shell width to length ratio and the valve asymmetry to be the main discriminant characters between Atlantic and Mediterranean populations. Additionally, the external microsculpture of additional and finer secondary ribs in G. glycymeris discriminates it from G. pilosa. Likewise, landmark-based geometric morphometrics revealed a stronger opisthogyrate beak and prosodetic ligament in G. pilosa than G. glycymeris. Our Bayesian and maximum likelihood phylogenetic analyses based on COI and ITS2 genes identified that G. glycymeris and G. pilosa form two separate monophyletic clades with mean interspecific divergence of 11% and 0.9% for COI and ITS2, respectively. The congruent patterns of morphometric analysis together with mitochondrial and nuclear phylogenetic reconstructions indicated the separation of the two coexisting species. The intraspecific divergence occurred during the Eocene and accelerated during the late Pliocene and Pleistocene. Glycymeris pilosa showed a high level of genetic diversity, appearing as a more robust species whose tolerance of environmental conditions allowed its expansion throughout the Mediterranean. PMID:27669452

  9. Combined Use of Morphological and Molecular Tools to Resolve Species Mis-Identifications in the Bivalvia The Case of Glycymeris glycymeris and G. pilosa.

    PubMed

    Purroy, Ariadna; Šegvić-Bubić, Tanja; Holmes, Anna; Bušelić, Ivana; Thébault, Julien; Featherstone, Amy; Peharda, Melita

    Morphological and molecular tools were combined to resolve the misidentification between Glycymeris glycymeris and Glycymeris pilosa from Atlantic and Mediterranean populations. The ambiguous literature on the taxonomic status of these species requires this confirmation as a baseline to studies on their ecology and sclerochronology. We used classical and landmark-based morphometric approaches and performed bivariate and multivariate analyses to test for shell character interactions at the individual and population level. Both approaches generated complementary information. The former showed the shell width to length ratio and the valve asymmetry to be the main discriminant characters between Atlantic and Mediterranean populations. Additionally, the external microsculpture of additional and finer secondary ribs in G. glycymeris discriminates it from G. pilosa. Likewise, landmark-based geometric morphometrics revealed a stronger opisthogyrate beak and prosodetic ligament in G. pilosa than G. glycymeris. Our Bayesian and maximum likelihood phylogenetic analyses based on COI and ITS2 genes identified that G. glycymeris and G. pilosa form two separate monophyletic clades with mean interspecific divergence of 11% and 0.9% for COI and ITS2, respectively. The congruent patterns of morphometric analysis together with mitochondrial and nuclear phylogenetic reconstructions indicated the separation of the two coexisting species. The intraspecific divergence occurred during the Eocene and accelerated during the late Pliocene and Pleistocene. Glycymeris pilosa showed a high level of genetic diversity, appearing as a more robust species whose tolerance of environmental conditions allowed its expansion throughout the Mediterranean.

  10. Use of sodium dodecyl sulfate and zinc sulfate as reference substances for toxicity tests with the mussel Perna perna (Linnaeus, 1758) (Mollusca: Bivalvia).

    PubMed

    Jorge, R A D L V C; Moreira, G S

    2005-06-01

    Effects of anthropogenic pollution have been observed at different trophic levels in the oceans, and toxicity tests constitute one way of monitoring these alterations. The present assay proposes the use of two reference substances, sodium dodecyl sulfate (SDS) and zinc sulfate, for Perna perna larvae. This common mussel on the Brazilian coast is used as a bioindicator and is of economic interest. The chronic static embryo-larval test of short duration (48 h) was employed to determine the NOEC, LOEC, and IC50 for SDS and zinc sulfate, as well as the coefficient of variation. Salinity, pH and un-ionized ammonia (NH3) and dissolved oxygen (DO) concentrations were measured to monitor water quality. The results demonstrated that the main alterations in veliger larvae are the development of only one shell, protruded mantle, malformed shell, formation of only part of a valve, clipped edges, uneven sizes and presence of a concave or convex hinge. NOEC values were lower than 0.25 mg L(-1) for zinc sulfate and 0.68 mg L(-1) for SDS. The coefficient of variation was 17.63% and 2.50% for zinc sulfate and SDS, respectively.

  11. Trace Elements in Calcifying Marine Invertebrates Indicate Diverse Sensitivities to the Seawater Carbonate System

    NASA Astrophysics Data System (ADS)

    Doss, W. C.

    2015-12-01

    Surface ocean absorption of anthropogenic CO2 emissions resulting in ocean acidification may interfere with the ability of calcifying marine organisms to biomineralize, since the drop in pH is accompanied by reductions in CaCO3 saturation state. However, recent experiments show that net calcification rates of cultured benthic invertebrate taxa exhibit diverse responses to pCO2-induced changes in saturation state (Ries et al., 2009). Advancement of geochemical tools as biomineralization indicators will enable us to better understand these results and therefore help predict the impacts of ongoing and future decrease in seawater pH on marine organisms. Here we build upon previous work on these specimens by measuring the elemental composition of biogenic calcite and aragonite precipitated in four pCO2 treatments (400; 600; 900; and 2850 ppm). Element ratios (including Sr/Ca, Mg/Ca, Li/Ca, B/Ca, U/Ca, Ba/Ca, Cd/Ca, and Zn/Ca) were analyzed in 18 macro-invertebrate species representing seven phyla (crustacea, cnidaria, echinoidea, rhodophyta, chlorophyta, gastropoda, bivalvia, annelida), then compared to growth rate data and experimental seawater carbonate system parameters: [CO32-], [HCO3-], pH, saturation state, and DIC. Correlations between calcite or aragonite composition and seawater carbonate chemistry are highly taxa-specific, but do not resemble trends observed in growth rate for all species. Apparent carbonate system sensitivities vary widely by element, ranging from strongly correlated to no significant response. Interpretation of these results is guided by mounting evidence for the capacity of individual species to modulate pH and/or saturation state at the site of calcification in response to ambient seawater chemistry. Such biomineralization pathways and strategies in turn likely influence elemental fractionation during CaCO3 precipitation. Ries, J.B., A.L. Cohen, A.L., and D.C. McCorkle (2009), Marine calcifiers exhibit mixed responses to CO2-induced ocean

  12. Historic developments in macrozoobenthos of the Rhine Meuse estuary: From a tidal inlet to a freshwater lake

    NASA Astrophysics Data System (ADS)

    Wijnhoven, S.; Sistermans, W.; Hummel, H.

    2008-01-01

    Water works during the 1960s and 1970s changed the northern part of the Rhine-Meuse estuary in the south-west of the Netherlands into a freshwater lake, from west to east divided into three basins called the Haringvliet, the Hollands Diep and the Biesbosch. Concurrently water quality parameters (e.g. nutrients and pollutants) changed drastically during the last 50 years. This study combines macrozoobenthic monitoring data from the region from 1960 to 2001 with trends in abiotic parameters to evaluate historic developments of the communities, including densities, species numbers and diversity, and assess future developments as a first step to a rehabilitation of the estuary as planned for January 01, 2008. During the 1960s, the macrozoobenthic densities of Oligochaeta and/or Polychaeta dominated communities increased with a gradual decrease of saltwater intrusion and salinity variability. The first years after the basins became stagnant, the species numbers per sample and the Shannon diversity were high due to the coexistence of salt and freshwater species. An increase in nutrient and pollutant loads led to a decrease in the macrozoobenthos densities. As water and sediment quality gradually improved, nowadays the former estuary contains high diversity and high density macrozoobenthic communities, whereas Oligochaeta and/or Polychaeta were dominant in the 1960s, and Bivalvia and Gastropoda were more abundant during the 1970s. Macrozoobenthic communities moved from the east to west with a time-lag, which may primarily be attributed to changing salinities, salinity variances and oxygen levels. Therefore, the current communities of the Haringvliet show similarities with the communities that occurred already during the 1960s in the Biesbosch. This study shows the value of macrozoobenthos monitoring data over longer periods. The possible impact of a new saltwater inlet in the west of the Haringvliet, allowing in the near future saltwater to enter 11.5 km eastward, yet

  13. Living macromolluscs from a paleo-reef region on the northeastern Venezuelan continental shelf

    NASA Astrophysics Data System (ADS)

    Buitrago, Joaquín; Capelo, Juan; Gutiérrez, Javier; Rada, Martín; Hernández, Ricardo; Grune, Sylvia

    2006-02-01

    Drowned reefs, fossil reefs or paleo-reefs, are important ecologically as areas of high biodiversity, foraging, shelter environment, and as areas supporting the spawning aggregations of economically important reef fish species. This is particularly significant when the structures are situated in a wide soft-bottom continental shelf. The presence of limestone structures, fossil reefs and pinnacles dating from circa 8 to 9 ka, to the north of the Paria Peninsula in north-eastern Venezuela, has been known to local fishermen for decades. Using echograms obtained during acoustic fisheries evaluations and the scarce previously available information, an improved location map of hard-bottom structures was made. Benthic samples to study macromolluscs were taken at depths between 54 and 93 m using an unmodified 2-m beam trawl. Four trawl samples were located over fossil reef areas while another four were situated in soft-bottom valleys between limestone structures. Fossil reefs in the area showed a highly patchy distribution. A total of 91 species from 43 Bivalvia, Gastropoda and Scaphopoda families were found, Gastropoda being the dominant class with 49 species. Paleo-reef-covered areas showed higher species richness and only 21% of the species found were common to both substrates. Gastropods Tonna maculosa and Polystira albida were the most abundant species and occurred in both substrate types. Bivalve life habits, a mixture of organism-substrate relationships, shell fixation, mobility and feeding type, differed significantly according to bottom type. Six species are recorded for the first time for eastern Venezuelan waters. Bottom heterogeneity plays an important role in marine ecosystems, providing shelter to fish populations and may be significant as breeding and nursery areas. Its presence in a region with biogeographical interest, situated in the confluence of three major provinces and with oceanographic conditions varying seasonally from upwelling dominated to

  14. Complete mitochondrial DNA sequence of the European flat oyster Ostrea edulis confirms Ostreidae classification.

    PubMed

    Danic-Tchaleu, Gwenaelle; Heurtebise, Serge; Morga, Benjamin; Lapègue, Sylvie

    2011-10-12

    Because of its typical architecture, inheritance and small size, mitochondrial (mt) DNA is widely used for phylogenetic studies. Gene order is generally conserved in most taxa although some groups show considerable variation. This is particularly true in the phylum Mollusca, especially in the Bivalvia. During the last few years, there have been significant increases in the number of complete mitochondrial sequences available. For bivalves, 35 complete mitochondrial genomes are now available in GenBank, a number that has more than doubled in the last three years, representing 6 families and 23 genera. In the current study, we determined the complete mtDNA sequence of O. edulis, the European flat oyster. We present an analysis of features of its gene content and genome organization in comparison with other Ostrea, Saccostrea and Crassostrea species. The Ostrea edulis mt genome is 16 320 bp in length and codes for 37 genes (12 protein-coding genes, 2 rRNAs and 23 tRNAs) on the same strand. As in other Ostreidae, O. edulis mt genome contains a split of the rrnL gene and a duplication of trnM. The tRNA gene set of O. edulis, Ostrea denselamellosa and Crassostrea virginica are identical in having 23 tRNA genes, in contrast to Asian oysters, which have 25 tRNA genes (except for C. ariakensis with 24). O. edulis and O. denselamellosa share the same gene order, but differ from other Ostreidae and are closer to Crassostrea than to Saccostrea. Phylogenetic analyses reinforce the taxonomic classification of the 3 families Ostreidae, Mytilidae and Pectinidae. Within the Ostreidae family the results also reveal a closer relationship between Ostrea and Saccostrea than between Ostrea and Crassostrea. Ostrea edulis mitogenomic analyses show a high level of conservation within the genus Ostrea, whereas they show a high level of variation within the Ostreidae family. These features provide useful information for further evolutionary analysis of oyster mitogenomes.

  15. Identification of Male Gametogenesis Expressed Genes from the Scallop Nodipecten subnodosus by Suppressive Subtraction Hybridization and Pyrosequencing

    PubMed Central

    Llera-Herrera, Raúl; García-Gasca, Alejandra; Abreu-Goodger, Cei; Huvet, Arnaud; Ibarra, Ana M.

    2013-01-01

    Despite the great advances in sequencing technologies, genomic and transcriptomic information for marine non-model species with ecological, evolutionary, and economical interest is still scarce. In this work we aimed to identify genes expressed during spermatogenesis in the functional hermaphrodite scallop Nodipecten subnodosus (Mollusca: Bivalvia: Pectinidae), with the purpose of obtaining a panel of genes that would allow for the study of differentially transcribed genes between diploid and triploid scallops in the context of meiotic arrest and reproductive sterility. Because our aim was to isolate genes involved in meiosis and other testis maturation-related processes, we generated suppressive subtractive hybridization libraries of testis vs. inactive gonad. We obtained 352 and 177 ESTs by clone sequencing, and using pyrosequencing (454-Roche) we maximized the identified ESTs to 34,276 reads. A total of 1,153 genes from the testis library had a blastx hit and GO annotation, including genes specific for meiosis, spermatogenesis, sex-differentiation, and transposable elements. Some of the identified meiosis genes function in chromosome pairing (scp2, scp3), recombination and DNA repair (dmc1, rad51, ccnb1ip1/hei10), and meiotic checkpoints (rad1, hormad1, dtl/cdt2). Gene expression analyses in different gametogenic stages in both sexual regions of the gonad of meiosis genes confirmed that the expression was specific or increased towards the maturing testis. Spermatogenesis genes included known testis-specific ones (kelch-10, shippo1, adad1), with some of these known to be associated to sterility. Sex differentiation genes included one of the most conserved genes at the bottom of the sex-determination cascade (dmrt1). Transcript from transposable elements, reverse transcriptase, and transposases in this library evidenced that transposition is an active process during spermatogenesis in N. subnodosus. In relation to the inactive library, we identified 833

  16. Complete mitochondrial DNA sequence of the European flat oyster Ostrea edulis confirms Ostreidae classification

    PubMed Central

    2011-01-01

    Background Because of its typical architecture, inheritance and small size, mitochondrial (mt) DNA is widely used for phylogenetic studies. Gene order is generally conserved in most taxa although some groups show considerable variation. This is particularly true in the phylum Mollusca, especially in the Bivalvia. During the last few years, there have been significant increases in the number of complete mitochondrial sequences available. For bivalves, 35 complete mitochondrial genomes are now available in GenBank, a number that has more than doubled in the last three years, representing 6 families and 23 genera. In the current study, we determined the complete mtDNA sequence of O. edulis, the European flat oyster. We present an analysis of features of its gene content and genome organization in comparison with other Ostrea, Saccostrea and Crassostrea species. Results The Ostrea edulis mt genome is 16 320 bp in length and codes for 37 genes (12 protein-coding genes, 2 rRNAs and 23 tRNAs) on the same strand. As in other Ostreidae, O. edulis mt genome contains a split of the rrnL gene and a duplication of trnM. The tRNA gene set of O. edulis, Ostrea denselamellosa and Crassostrea virginica are identical in having 23 tRNA genes, in contrast to Asian oysters, which have 25 tRNA genes (except for C. ariakensis with 24). O. edulis and O. denselamellosa share the same gene order, but differ from other Ostreidae and are closer to Crassostrea than to Saccostrea. Phylogenetic analyses reinforce the taxonomic classification of the 3 families Ostreidae, Mytilidae and Pectinidae. Within the Ostreidae family the results also reveal a closer relationship between Ostrea and Saccostrea than between Ostrea and Crassostrea. Conclusions Ostrea edulis mitogenomic analyses show a high level of conservation within the genus Ostrea, whereas they show a high level of variation within the Ostreidae family. These features provide useful information for further evolutionary analysis of oyster

  17. Molecular detection and species identification of Alexandrium (Dinophyceae) causing harmful algal blooms along the Chilean coastline

    PubMed Central

    Jedlicki, Ana; Fernández, Gonzalo; Astorga, Marcela; Oyarzún, Pablo; Toro, Jorge E.; Navarro, Jorge M.; Martínez, Víctor

    2012-01-01

    Background and aims On the basis of morphological evidence, the species involved in South American Pacific coast harmful algal blooms (HABs) has been traditionally recognized as Alexandrium catenella (Dinophyceae). However, these observations have not been confirmed using evidence based on genomic sequence variability. Our principal objective was to accurately determine the species of Alexandrium involved in local HABs in order to implement a real-time polymerase chain reaction (PCR) assay for its rapid and easy detection on filter-feeding shellfish, such as mussels. Methodology For species-specific determination, the intergenic spacer 1 (ITS1), 5.8S subunit, ITS2 and the hypervariable genomic regions D1–D5 of the large ribosomal subunit of local strains were sequenced and compared with two data sets of other Alexandrium sequences. Species-specific primers were used to amplify signature sequences within the genomic DNA of the studied species by conventional and real-time PCR. Principal results Phylogenetic analysis determined that the Chilean strain falls into Group I of the tamarensis complex. Our results support the allocation of the Chilean Alexandrium species as a toxic Alexandrium tamarense rather than A. catenella, as currently defined. Once local species were determined to belong to Group I of the tamarensis complex, a highly sensitive and accurate real-time PCR procedure was developed to detect dinoflagellate presence in Mytilus spp. (Bivalvia) samples after being fed (challenged) in vitro with the Chilean Alexandrium strain. The results show that real-time PCR is useful to detect Alexandrium intake in filter-feeding molluscs. Conclusions It has been shown that the classification of local Alexandrium using morphological evidence is not very accurate. Molecular methods enabled the HAB dinoflagellate species of the Chilean coast to be assigned as A. tamarense rather than A. catenella. Real-time PCR analysis based on A. tamarense primers allowed the

  18. Time- and depth-wise trophic niche shifts in Antarctic benthos

    PubMed Central

    Calizza, Edoardo; Careddu, Giulio; Sporta Caputi, Simona; Costantini, Maria Letizia

    2018-01-01

    Climate change is expected to affect resource-consumer interactions underlying stability in polar food webs. Polar benthic organisms have adapted to the marked seasonality characterising their habitats by concentrating foraging and reproductive activity in summer months, when inputs from sympagic and pelagic producers increase. While this enables the persistence of biodiverse food webs, the mechanisms underlying changes in resource use and nutrient transfer are poorly understood. Thus, our understanding of how temporal and spatial variations in the supply of resources may affect food web structure and functioning is limited. By means of C and N isotopic analyses of two key Antarctic benthic consumers (Adamussium colbecki, Bivalvia, and Sterechinus neumayeri, Echinoidea) and Bayesian mixing models, we describe changes in trophic niche and nutrient transfer across trophic levels associated with the long- and short-term diet and body size of specimens sampled in midsummer in both shallow and deep waters. Samplings occurred soon after the sea-ice broke up at Tethys Bay, an area characterised by extreme seasonality in sea-ice coverage and productivity in the Ross Sea. In the long term, the trophic niche was broader and variation between specimens was greater, with intermediate-size specimens generally consuming a higher number of resources than small and large specimens. The coupling of energy channels in the food web was consequently more direct than in the short term. Sediment and benthic algae were more frequently consumed in the long term, before the sea-ice broke up, while consumers specialised on sympagic algae and plankton in the short term. Regardless of the time scale, sympagic algae were more frequently consumed in shallow waters, while plankton was more frequently consumed in deep waters. Our results suggest a strong temporal relationship between resource availability and the trophic niche of benthic consumers in Antarctica. Potential climate-driven changes

  19. Time- and depth-wise trophic niche shifts in Antarctic benthos.

    PubMed

    Calizza, Edoardo; Careddu, Giulio; Sporta Caputi, Simona; Rossi, Loreto; Costantini, Maria Letizia

    2018-01-01

    Climate change is expected to affect resource-consumer interactions underlying stability in polar food webs. Polar benthic organisms have adapted to the marked seasonality characterising their habitats by concentrating foraging and reproductive activity in summer months, when inputs from sympagic and pelagic producers increase. While this enables the persistence of biodiverse food webs, the mechanisms underlying changes in resource use and nutrient transfer are poorly understood. Thus, our understanding of how temporal and spatial variations in the supply of resources may affect food web structure and functioning is limited. By means of C and N isotopic analyses of two key Antarctic benthic consumers (Adamussium colbecki, Bivalvia, and Sterechinus neumayeri, Echinoidea) and Bayesian mixing models, we describe changes in trophic niche and nutrient transfer across trophic levels associated with the long- and short-term diet and body size of specimens sampled in midsummer in both shallow and deep waters. Samplings occurred soon after the sea-ice broke up at Tethys Bay, an area characterised by extreme seasonality in sea-ice coverage and productivity in the Ross Sea. In the long term, the trophic niche was broader and variation between specimens was greater, with intermediate-size specimens generally consuming a higher number of resources than small and large specimens. The coupling of energy channels in the food web was consequently more direct than in the short term. Sediment and benthic algae were more frequently consumed in the long term, before the sea-ice broke up, while consumers specialised on sympagic algae and plankton in the short term. Regardless of the time scale, sympagic algae were more frequently consumed in shallow waters, while plankton was more frequently consumed in deep waters. Our results suggest a strong temporal relationship between resource availability and the trophic niche of benthic consumers in Antarctica. Potential climate-driven changes

  20. Parasitological survey of mangrove oyster, Crassostrea rhizophorae, in the Pacoti River Estuary, Ceará State, Brazil.

    PubMed

    Sabry, Rachel Costa; Gesteira, Tereza Cristina Vasconcelos; Magalhães, Aimê Rachel Magenta; Barracco, Margherita Anna; Guertler, Cristhiane; Ferreira, Liana Pinho; Vianna, Rogério Tubino; da Silva, Patrícia Mirella

    2013-01-01

    The mangrove oyster, Crassostrea rhizophorae (Bivalvia, Ostreidae) is commonly collected by fisherwomen in the estuaries of the Ceará State (CE), Northeastern Brazil. Despite the socioeconomic importance of this natural resource, there are few studies on the health of the oysters in this region. This study aimed to survey pathological changes in the mangrove oyster C. rhizophorae in the estuary of the Pacoti River, CE. Adult oysters were collected in August 2008 (N=450) and December 2009 (N=450) at three sites of the Pacoti estuary and in 2010 (N=600) samplings were done quarterly at one site which has showed the higher prevalence de Perkinsus. Macroscopical and histological analyses were used to evaluate pathological changes, Ray's Fluid Thioglycollate Medium (RFTM) to detect Perkinsus spp. and polymerase chain reactions (PCR) and DNA sequencing to identify Perkinsus species. In 2009, RFTM assay detected Perkinsus sp. infecting the tissues of C. rhizophorae with low prevalences of 1.3%, 6.7% e 7.3% in sites 1, 2 and 3, respectively, and in 2010, in site 3, prevalence was 2% (12 of 600 oysters). PCR did not confirm any positive case in 2009 and only 5 in 2010. The phylogenetic analyses strongly indicate that the Perkinsus species infecting oysters C. rhizophorae of this study belongs to Perkinsus beihaiensis. The histology confirmed 11 cases of Perkinsus sp. infecting the C. rhizophorae in 2009, and only two cases in 2010. Nematopsis sp. was the protozoan observed with greater prevalence (up 96.7%). Other found protozoa were: Trichodina, Sphenophrya, Ancistrocoma - like and an unknown ovarian parasite. The metazoa found were the polychaete Polydora with high prevalences, a turbellarian, possibly of the genus Urastoma, an unidentified digenean metacercariae and larvae of cestode Tylocephalum. A continuous monitoring of diseases in bivalves from this natural population is recommended, since the phylogenetic analyses indicate the occurrence of P. beihaiensis

  1. Pleurolucina from the western Atlantic and eastern Pacific Oceans: a new intertidal species from Curaçao with unusual shell microstructure (Mollusca, Bivalvia, Lucinidae).

    PubMed

    Glover, Emily A; Taylor, John D

    2016-01-01

    A new shallow water species of the lucinid bivalve Pleurolucina is described from Curaçao in the southern Caribbean Sea and compared with known species of the genus from the western Atlantic and eastern Pacific Oceans. Although confused with the Floridian species Pleurolucina leucocyma , it is most similar to the eastern Pacific Pleurolucina undata . As in all studied lucinids, the new species possesses symbiotic bacteria housed in the ctenidia. The shell microstructure is unusual with repeated and intercalated conchiolin layers that have sublayers of 'tulip-shaped' calcareous spherules. Predatory drillings by naticid gastropods frequently terminate at the conchiolin layers.

  2. Gender-Associated Mitochondrial DNA Heteroplasmy in Somatic Tissues of the Endangered Freshwater Mussel Unio crassus (Bivalvia: Unionidae): Implications for Sex Identification and Phylogeographical Studies.

    PubMed

    Mioduchowska, Monika; Kaczmarczyk, Agnieszka; Zając, Katarzyna; Zając, Tadeusz; Sell, Jerzy

    2016-11-01

    Some bivalve species possess two independent mitochondrial DNA lineages: maternally (F-type) and paternally (M-type) inherited. This phenomenon is called doubly uniparental inheritance. It is generally agreed that F-type mtDNA is typically present in female somatic and gonadal tissues as well as in male somatic tissues, whereas the M-type mtDNA occurs only in male germ line and gonadal tissue. In the present study, the mtDNA heteroplasmy (for both F and M genomes) in male somatic tissues of Unio crassus (Philipsson, 1788), species threatened with extinction, has been confirmed. Taking advantage from the presence of Mcox1 marker only in male somatic tissues, we developed a new method of sex identification in this endangered species, using nondestructive tissue sampling. Probability of correct sex identification was estimated at 97.5%. The present study is the first report on gender-associated mitochondrial DNA heteroplasmy in male somatic tissues of thick-shelled river mussel and first approach to U. crassus sex identification at molecular level. Our study also confirmed the utility of paternally inherited Mcox1 gene fragment as a complementary molecular tool for resolving phylogeographical relationships among populations of thick-shelled river mussel. © 2017 Wiley Periodicals, Inc.

  3. First record and description of metacercariae of Curtuteria arguinae n. sp. (Digenea: Echinostomatidae), parasite of cockles Cerastoderma edule (Mollusca: Bivalvia) in Arcachon Bay, France.

    PubMed

    Desclaux, Céline; Russell-Pinto, Fernanda; de Montaudouin, Xavier; Bachelet, Guy

    2006-06-01

    A new Himasthlinae species, Curtuteria arguinae, is described as metacercariae from the cockle Cerastoderma edule (L.), collected at Banc d'Arguin (southwestern France). These metacercariae encysted preferentially in the mantle and also in the foot of cockles. Encysted and chemically excysted metacercariae were studied by light microscopy and scanning electron microscopy, respectively. Excysted metacercariae were elongated and curved ventrally. They bore a 33-spine circumoral collar. Sensory papillae were arranged around the oral sucker and also symmetrically along the ventral surface body, from the collar to the acetabulum. The dorsal and ventral tegument surfaces were densely packed with similar pointed spines. The posterior end of the body was without any spines. Among the Curtuteria species described previously, only Curtuteria haematopodis Smogorjewskaja and Iskova, 1966 had the same number of circumoral collar spines. A 6-yr field survey showed that the cockle population at Banc d'Arguin was subjected to a summer infection of C. arguinae. Curtuteria arguinae phenology of infection is characterized by interannual variability and seasonality (beginning in July-August and maximum in autumn). The first intermediate and final hosts remain unknown.

  4. A systematic catalogue of butterflies of the former Soviet Union (Armenia, Azerbaijan, Belarus, Estonia, Georgia, Kyrgyzstan, Kazakhstan, Latvia, Lituania, Moldova, Russia, Tajikistan, Turkmenistan, Ukraine, Uzbekistan) with special account to their type specimens (Lepidoptera: Hesperioidea, Papilionoidea).

    PubMed

    Korb, Stanislav K; Bolshakov, Lavr V

    2016-09-01

    A catalogue of butterflies of Russia and adjacent countries is given, with special account to the name-bearing types depository. This catalogue contains data about 86 species (3 of them are questionable) of Hesperiidae (22 genera); 47 species of Papilionidae (14 genera); 89 species of Pieridae (5 of them are questionable)  (15 genera); 1 species (1 genus) of Libytheinae(dae); 2 species of Danainae(dae) (2 genera); 160 species of Nymphalinae(dae) (1 of them is questionable) (23 genera); 259 species of Satyrinae(dae) (14 of them are questionable, mainly from genera Oeneis and Pseudochazara) (34 genera); 3 species of Riodinidae (2 genera); 318 species of Lycaenidae (11 of them are questionable, mainly from genera Neolycaena and Plebeius) (57 genera). In total: 965 species of butterflies, 174 genera, by countries: Armenia-244, Azerbaijan-225, Belarus-107, Estonia-113, Georgia-211, Kyrgyzstan-316, Kazakhstan-344, Latvia-115, Lituania-126, Moldova-87, Russia-522, Tajikistan-295, Turkmenistan-159, Ukraine-192, Uzbekistan-241. Detailed distribution and subspecific structure (if present) for every species is provided. Lectotypes of the following species-group taxa are designated: Hesperia poggei Lederer, 1858, Parnassius felderi Bremer, 1861, P. eversmanni Eversmann, 1851, P. boedromius Püngeler, 1901, Limenitis moltrechti Kardakov, 1928, L. sydyi Kindermann, 1853, L. amphyssa Ménétriès, 1859, L. doerriesi Staudinger, 1892, L. helmanni duplicata Staudinger, 1892, L. homeyeri Tancré, 1881, Argynnis penelope Staudinger, 1891, A. thore borealis Staudinger, 1861, Vanessa io geisha Stichel, [1908], Melitaea maturna staudingeri Wnukowsky, 1929 (=uralensis Staudinger, 1871), M. didymina Staudinger, 1895, Papilio fascelis Esper, 1783, Thecla quercivora Staudinger, 1887, Lycaena orion var. ornata Staudinger, 1892. The following nomenclatural acts are established: Neolycaena submontana baitenovi (Zhdanko, 2011), comb. et stat.n. The following new synonymy is provided: Hesperia

  5. [Lipid and fatty acid profile of Perna viridis, green mussel (Mollusca: Bivalvia) in different areas of the Eastern Venezuela and the West Coast of Trinidad].

    PubMed

    Koftayan, Tamar; Milano, Jahiro; D'Armas, Haydelba; Salazar, Gabriel

    2011-03-01

    The species Perna viridis is a highly consumed species, which fast growth makes it an interesting aquaculture alternative for Venezuelan and Trinidad coasts. With the aim to contribute with its nutritional value information, this study analyzed lipid and fatty acid contents from samples taken in five locations from Eastern Venezuela and three from Trinidad West Coast. Total lipids were extracted and quantified, from a pooled sample of 100 organisms per location, by standard gravimetric methods, and their identification and quantification was done by TLC/FID (Iatroscan system). Furthermore, the esterified fatty acids of total lipid, phospholipids and triacylglycerols were identified and quantified by gas chromatography. Eastern Venezuela samples from Los Cedros, La Brea and Chaguaramas showed the highest total lipid values of 7.92, 7.74 and 7.53, respectively, and the minimum values were obtained for La Restinga (6.08%). Among lipid composition, Chacopata samples showed the lowest phospholipid concentration (48.86%) and the maximum values for cholesterol (38.87%) and triacylglycerols (12.26%); besides, La Esmeralda and Rio Caribe samples exhibited maximum phospholipids (88.71 and 84.93 respectively) and minimum cholesterol (6.50 and 4.42%) concentrations. Saturated fatty acids represented between 15.04% and 65.55% within total lipid extracts, with maximum and minimum values for La Esmeralda and Chacopata, respectively. Polyunsaturated results resulted between 7.80 and 37.18%, with higher values in La Brea and lower values in La Esmeralda. For phospholipids, saturated fatty acids concentrations varied between 38.81 and 48.68% for Chaguaramas and Chacopata samples, respectively. In the case of polyunsaturated fatty acids, these varied between non detected and 34.51%, with high concentrations in Los Cedros (27.97%) and Chaguaramas (34.51%) samples. For the triacylglycerols, the saturated fatty acids composition oscillated between 14.27 and 53.80% with low concentrations for Chacopata and high concentration for La Restinga; the polyunsaturated fatty acids were between 4.66 and 35.55% with lower values for Chacopata and higher values for Chaguaramas samples. P. viridis is recommended for human being consumption, according to the high content of unsaturated fatty acids found for this species.

  6. Molecular resolution of the family Dreissenidae (Mollusca: Bivalvia) with emphasis on Ponto-Caspian species, including first report of Mytilopsis leucophaeata in the Black Sea basin.

    PubMed

    Therriault, Thomas W; Docker, Margaret F; Orlova, Marina I; Heath, Daniel D; MacIsaac, Hugh J

    2004-03-01

    Considerable uncertainty exists in determination of the phylogeny among extant members of the Dreissenidae, especially those inhabiting the Ponto-Caspian basin, as multiple systematic revisions based on morphological characteristics have failed to resolve relationships within this group of bivalves. In this study we use DNA sequence analyses of two mitochondrial gene fragments, 16S rRNA and cytochrome c oxidase subunit I (COI), to determine phylogenetic relationships among Dreissena rostriformis, D. bugensis, D. polymorpha, D. stankovici, Congeria kusceri, and Mytilopsis leucophaeata. Dreissena stankovici was determined to represent a sister taxa to D. polymorpha and both are more closely related to other extant Dreissena species than Congeria or Mytilopsis. Sequence divergence between D. rostriformis and D. bugensis was relatively low (0.3-0.4%), suggesting that these two taxa constitute a single species. However, environmental differences suggest two races of D. rostriformis, a brackish water race (rostriformis) and a freshwater race (bugensis). Spread of bugensis-type individuals into habitats in the Caspian Sea that are occupied by rostriformis-type individuals may create novel hybridization opportunities. Species-specific molecular markers also were developed in this study since significant intraspecific variation in morphological features complicates dreissenid identification. Using two gene fragments (nuclear 28S and 16S), we identified restriction fragment length polymorphisms (RFLPs) that distinguish among D. rostriformis/bugensis, D. polymorpha, and D. stankovici and revealed the presence of a cryptic invader to the Black Sea basin, Mytilopsis leucophaeata. This is the first report of this North American native in southern Europe.

  7. Gene flow between Atlantic and Pacific Ocean basins in three lineages of deep-sea clams (Bivalvia: Vesicomyidae: Pliocardiinae) and subsequent limited gene flow within the Atlantic

    NASA Astrophysics Data System (ADS)

    LaBella, Abigail Leavitt; Van Dover, Cindy L.; Jollivet, Didier; Cunningham, Clifford W.

    2017-03-01

    Pliocardiin (vesicomyid) clams rely on microbial symbionts for nutrition and are obligate inhabitants of deep-sea chemosynthetic ecosystems. Unlike many other invertebrate hosts of chemosynthetic microbes, pliocardiin clams are found in every ocean in a variety of reducing habitats, including hydrothermal vents, cold seeps, organic falls and deep-sea fans. The global distribution of pliocardiin clams suggests historical gene flow between ocean basins. We focus on 3 pliocardiin genera-'Pliocardia' I, Calyptogena and Abyssogena-each of which has a pair of sister clades in the Atlantic and Pacific. Our work tests the hypothesis that historical gene flow between the Atlantic and Pacific Oceans within these genera was interrupted by the closure of the Panamanian seaway and tests whether isolation between the ocean basins is the result of vicariance or past colonization. These questions are investigated in the context of fossil evidence, biogeography and phylogenetics. This study revealed a set of substitution rates consistent with other invertebrate studies (μ=0.8%/My/lineage), and a set consistent with much lower rates often attributed to deep-sea organisms (μ=0.3%/My/lineage). Among the Pacific/Atlantic sister pairs, 'Pliocardia' I COI divergence per lineage is intermediate (2.5%), Calyptogena is the highest (6.1%) and Abyssogena the lowest (0.8%). The substitution rates suggest that 'Pliocardia' I and Calyptogena have histories of at least 2.8 My in the Atlantic, with Calyptogena likely older. The slower rate, however, is inconsistent with both the maximum age of the family and several well studied fossils: leaving the faster rate preferred. With the faster rate, the Abyssogena southwardae clade diverged from its Pacific sister clade around 1 Mya, which likely post-dates the closure of the Isthmus of Panama and the opening of the Bering Strait. In light of this recent divergence, we test the previously proposed hypothesis that there is a high level of ongoing gene flow between Atlantic populations of A. southwardae. A. southwardae has colonized a broad geographic range of seep sites including the West Florida Escarpment, the Barbados Accretionary Prism, the Lobes of Congo, and the Mid-Atlantic Ridge north and south of the Romanche Transform Fault. Coalescent methods detect gene flow between Barbados and the Mid-Atlantic ridge; and between the West Florida Escarpment and the Lobes of Congo. All other comparisons failed to detect gene flow, contrary to prevailing interpretations of connectivity across the entire Atlantic Basin.

  8. Telomeres shorten more slowly in slow-aging wild animals than in fast-aging ones.

    PubMed

    Dantzer, Ben; Fletcher, Quinn E

    2015-11-01

    Research on the physiological causes of senescence aim to identify common physiological mechanisms that explain age-related declines in fitness across taxonomic groups. Telomeres are repetitive nucleotide sequences found on the ends of eukaryotic chromosomes. Past research indicates that telomere attrition is strongly correlated with inter-specific rates of aging, though these studies cannot distinguish whether telomere attrition is a cause or consequence of the aging process. We extend previous research on this topic by incorporating recent studies to test the hypothesis that telomeres shorten more slowly with age in slow-aging animals than in fast-aging ones. We assembled all studies that have quantified cross-sectional (i.e. between-individual) telomere rates of change (TROC) over the lifespans of wild animals. This included 22 estimates reflecting absolute TROC (TROCabs, bp/yr, primarily measured using the terminal restriction fragment length method), and 10 estimates reflecting relative TROC (TROCrel, relative telomere length/yr, measured using qPCR), from five classes (Aves, Mammalia, Bivalvia, Reptilia, and Actinopterygii). In 14 bird species, we correlated between-individual (i.e. cross-sectional) TROCabs estimates with both maximum lifespan and a phylogenetically-corrected principle component axis (pcPC1) that reflected the slow-fast axis of life-history variation. Bird species characterized by faster life-histories and shorter maximum lifespans had faster TROCabs. In nine studies, both between-individual and within-individual TROC estimates were available (n=8 for TROCabs, n=1 for TROCrel). Within-individual TROC estimates were generally greater than between-individual TROC estimates, which is indicative of selective disappearance of individuals with shorter telomeres. However, the difference between within- and between-individual TROC estimates was only significant in two out of nine studies. The relationship between within-individual TROCabs and maximum

  9. A holistic approach to taxonomic evaluation of two closely related endangered freshwater mussel species, the oyster mussel Epioblasma capsaeformis and tan riffleshell Epioblasma florentina walkeri (Bivalvia: Unionidae)

    USGS Publications Warehouse

    Jones, J.W.; Neves, R.J.; Ahlstedt, S.A.; Hallerman, E.M.

    2006-01-01

    Species in the genus Epioblasma have specialized life history requirements and represent the most endangered genus of freshwater mussels (Unionidae) in the world. A genetic characterization of extant populations of the oyster mussel E. capsaeformis and tan riffleshell E. florentina walkeri sensu late was conducted to assess taxonomic validity and to resolve conservation issues for recovery planning. These mussel species exhibit pronounced phenotypic variation, but were difficult to characterize phylogenetically using DNA sequences. Monophyletic lineages, congruent with phenotypic variation among species, were obtained only after extensive analysis of combined mitochondrial (1396 bp of 16S, cytochrome-b, and ND1) and nuclear (515 bp of ITS-1) DNA sequences. In contrast, analysis of variation at 10 hypervariable DNA microsatellite loci showed moderately to highly diverged populations based on FST and R ST values, which ranged from 0.12 to 0.39 and 0.15 to 0.71, respectively. Quantitative variation between species was observed in fish-host specificity, with transformation success of glochidia of E. capsaeformis significantly greater (P<0.05) on greenside darter Etheostoma blennioides, and that of E. f. walkeri significantly greater (P<0.05) on fantail darter Etheostoma flabellare. Lengths of glochidia differed significantly (P<0.001) among species and populations, with mean sizes ranging from 241 to 272 ??m. The texture and colour of the mantle-pad of E. capsaeformis sensu stricto is smooth and bluish-white, whereas that of E. f. walkeri is pustuled and brown, with tan mottling. Based on extensive molecular, morphological and life history data, the population of E. capsaeformis from the Duck River, Tennessee, USA is proposed as a separate species, and the population of E. f. walkeri from Indian Creek, upper Clinch River, Virginia, USA is proposed as a distinct subspecies.

  10. Saxitoxins and okadaic acid group: accumulation and distribution in invertebrate marine vectors from Southern Chile.

    PubMed

    García, Carlos; Pérez, Francisco; Contreras, Cristóbal; Figueroa, Diego; Barriga, Andrés; López-Rivera, Américo; Araneda, Oscar F; Contreras, Héctor R

    2015-01-01

    Harmful algae blooms (HABs) are the main source of marine toxins in the aquatic environment surrounding the austral fjords in Chile. Huichas Island (Aysén) has an history of HABs spanning more than 30 years, but there is limited investigation of the bioaccumulation of marine toxins in the bivalves and gastropods from the Region of Aysén. In this study, bivalves (Mytilus chilenses, Choromytilus chorus, Aulacomya ater, Gari solida, Tagelus dombeii and Venus antiqua) and carnivorous gastropods (Argobuccinum ranelliformes and Concholepas concholepas) were collected from 28 sites. Researchers analysed the accumulation of STX-group toxins using a LC with a derivatisation post column (LC-PCOX), while lipophilic toxins (OA-group, azapiracids, pectenotoxins and yessotoxins) were analysed using LC-MS/MS with electrospray ionisation (+/-) in visceral (hepatopancreas) and non-visceral tissues (mantle, adductor muscle, gills and foot). Levels of STX-group and OA-group toxins varied among individuals from the same site. Among all tissue samples, the highest concentrations of STX-group toxins were noted in the hepatopancreas in V. antiqua (95 ± 0.1 μg STX-eq 100 g(-1)), T. dombeii (148 ± 1.4 μg STX-eq 100 g(-1)) and G. solida (3232 ± 5.2 μg STX-eq 100 g(-1); p < 0.05); in the adductor muscle in M. chilensis (2495 ± 6.4 μg STX-eq 100 g(-1); p < 0.05) and in the foot in C. concholepas (81 ± 0.7 μg STX-eq 100 g(-1)) and T. dombeii (114 ± 1.2 μg STX-eq 100 g(-1)). The highest variability of toxins was detected in G. solida, where high levels of carbamate derivatives were identified (GTXs, neoSTX and STX). In addition to the detected hydrophilic toxins, OA-group toxins were detected (OA and DTX-1) with an average ratio of ≈1:1. The highest levels of OA-group toxins were in the foot of C. concholepas, with levels of 400.3 ± 3.6 μg OA eq kg(-1) (p < 0.05) and with a toxic profile composed of 90% OA. A wide range of OA-group toxins was detected in M. chilensis with a

  11. New threats of an old enemy: the distribution of the shipworm Teredo navalis L. (Bivalvia: Teredinidae) related to climate change in the Port of Rotterdam area, the Netherlands.

    PubMed

    Paalvast, Peter; van der Velde, Gerard

    2011-08-01

    The effects of four climate change scenarios for the Netherlands on the distribution of the shipworm upstream of the Rhine-Meuse estuary are described. Global warming will cause dry and warmer summers and decreased river discharges. This will extend the salinity gradient upstream in summer and fall and may lead to attacks on wooden structures by the shipworm. Scenarios including one or two degree temperature increases by 2050 compared to 1990 with a weak change in the air circulation over Europe will lead to an increased chance of shipworm damage upstream from once in 36 years to once in 27 or 22 years, respectively; however, under a strong change in air circulation, the chance of shipworm damage increases to once in 6 or 3 years, respectively. The upstream expansion of the distribution of the shipworm will also be manifested in other northwest European estuaries and will be even stronger in southern Europe. Copyright © 2011 Elsevier Ltd. All rights reserved.

  12. Minute co-variations of Sr/Ca ratios and microstructures in the aragonitic shell of Cerastoderma edule (Bivalvia) - Are geochemical variations at the ultra-scale masking potential environmental signals?

    NASA Astrophysics Data System (ADS)

    Füllenbach, Christoph S.; Schöne, Bernd R.; Shirai, Kotaro; Takahata, Naoto; Ishida, Akizumi; Sano, Yuji

    2017-05-01

    It remains a challenging task to reconstruct water temperatures from Sr/Ca ratios of bivalve shells. Although in many aragonitic species, Sr/Ca is negatively correlated to temperature - which is expected based on abiogenic precipitation experiments, the incorporation of Sr into the shell of bivalves is strongly controlled by physiological processes and occurs away from the predicted thermodynamic equilibrium. Strontium-to-calcium ratios of aragonitic shells remain far below that of the ambient water. Moreover, Sr concentrations vary considerably among shell portions consisting of different microstructures and/or organic content. Values observed at annual growth lines and within the intervening shell portions (= annual growth increments) deviate much stronger from each other than expected from a change in temperature or Sr/Cawater. As demonstrated here by ultra-high-resolution chemical analysis (EPMA, NanoSIMS) of a Cerastoderma edule shell, Sr concentrations are also heterogeneously distributed at approximately micrometer resolution. For example, in the outer portion of the outer shell layer, Sr/Ca ratios were statistically significantly (t-, u-tests) higher at circatidal growth lines (irregular simple prismatic structure; arithmetic mean ± 1 standard deviation = 2.86 ± 0.38 mmol/mol; n = 53) than within circatidal increments (nondenticular prismatic structure; 2.42 ± 0.25 mmol/mol; n = 51). S/Cashell, a representative of the concentration of organics, showed the opposite pattern, i.e., significantly higher values in circatidal increments (2.37 ± 0.29 mmol/mol; n = 51) than at circatidal growth lines (2.13 ± 0.47 mmol/mol; n = 53). Overall highest values of Sr/Cashell (3.47 ± 0.65 mmol/mol; n = 3) and S/Cashell (3.98 ± 0.65 mmol/mol; n = 3), however, were typically associated with annual growth lines and larger biomineral units. The intimate link between Sr/Cashell, S/Cashell and shell architecture may indicate that microstructures or the processes controlling their formation exert a strong control over the incorporation of strontium into shells of C. edule. Analytical techniques with lower sampling resolution, e.g., LA-ICP-MS, cannot resolve such fine-scale Sr variations. As a result, the signal-to-noise ratio decreases and the data generated by such techniques may therefore not seem to provide useful paleotemperature data. Future studies should therefore employ a combined analysis of Sr/Cashell and shell microstructures, and interpret Sr/Ca values of shell portions with different microstructures separately.

  13. Benthic Community Composition and Seabed Characteristics of a Chukchi Sea Pockmark

    NASA Astrophysics Data System (ADS)

    MacDonald, I. R.; Bluhm, B.; Iken, K.; Gagaev, S.; Robinson, S.

    2005-12-01

    densities of over 50 individuals per square meter. Preliminary analysis of the box core samples: Polychaetes (e.g. Chaetozone setose, Aricidea sp., Ophelina sp., Progoniada sp., Proclea graffi, Protula globifera), Foraminifera, Nemertini, Coronata (Cnidaria tubes), Sipunculida (Golfingia), Bivalvia, Anthozoa.

  14. An integrated evaluation of the persistence and effects of 4-nonylphenol in an experimental littoral ecosystem

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Liber, K.; Knuth, M.L.; Stay, F.S.

    1999-03-01

    A comprehensive littoral enclosure study was conducted to assess the persistence and distribution of 4-nonylphenol (NP) in a littoral ecosystem, and to evaluate the compound`s effects on resident aquatic biota. Enclosures with a mean ({+-} SD) surface area and volume of 31.4 {+-} 3.3 m{sup 2} and 32.0 {+-} 6.4 m{sup 3}, respectively, received eleven applications at 48-h intervals with one of four different rates of NP. This created a 20-d application period which was followed by a three to fourteen month observation period, depending on the endpoint measured. Mean {+-} SD NP concentrations in the water column measured 2more » h after each application averaged 5 {+-} 4, 23 {+-} 11, 76 {+-} 21, and 243 {+-} 41 {micro}g/L at nominal treatments of 3, 30, 100, and 300 {micro}g/L, respectively. Persistence in the water column was relatively short, with a dissipation half-life estimated at {le} 1.2 d. Persistence of NP in sediment and on macrophytes was substantially longer, with estimated half-lives of 28 to 104 d and 8 to 13 d, respectively. Zooplankton was the most sensitive group of organisms evaluated, with significant reductions in population abundances of some copepod taxa observed at the 23 {+-} 11-{micro}g/L treatment. Fish survival was affected at 243 {+-} 41 {micro}g/L. The most sensitive benthic macroinvertebrate taxon, Pisidium (Bivalvia) was affected at 76 {+-} 21 {micro}g/L, but most taxa were only affected at the 243 {+-} 41-{micro}g/L treatment. None of the assessed populations were affected at the 5 {+-} 4-{micro}g/L treatment. Macrophytes and periphyton were not adversely affected by any of the treatments. Overall community composition, assessed at the family level or higher, was not affected at or below the 23 {+-} 11-{micro}g/L treatment, but did exhibit substantial changes at the 243 {+-} 41-{micro}g/L treatment. Some minor changes were observed at the 76 {+-} 21-{micro}g/L treatment. The maximum acceptable toxicant concentration in the water

  15. [Spatial patterns in communities of aquatic macroinvertebrates of Argentinean Puna].

    PubMed

    Nieto, Carolina; Malizia, Agustina; Carilla, Julieta; Izquierdo, Andrea; Rodríguez, José; Cuello, Soledad; Zannier, Martín; Grau, H Ricardo

    2016-06-01

    correlation with some macroinvertebrates belonging to functional trophic groups such as filter-collectors, collectors and scrapers. Finally, conductivity, whole dissolved solids and salt concentration had their highest value in peatbog 6, where Bivalvia (filter-collector) and Hyalella (collector) were also found. The results obtained attest that these macroinvertebrates displayed diversity and composition spatial patterns, the most important feature being their relationship with the surrounding vegetation, and to a lesser extent, with the physical and chemical traits of water in seven fertile lowlands in the Argentinean Puna.

  16. Fresh-Water Mussels (Mollusca: Bivalvia: Unionidae) of the Upper Mississippi River: Observations at Selected Sites within the 9-Foot Channel Navigation Project on Behalf of the U.S. Army.

    DTIC Science & Technology

    1978-06-16

    Larailie teree *Yellow Sandshell Slough Sandshell Ladyfinger Banana Shell L. higginsi *Higgins’ Eye Higgins Eye Higgin’s (sic] Eye Higgin’s Sandshell...Elliptio hopetonensia Lea. M. S. thesis, Emory University, Atlanta, Georgia. Pp. 1-61. fiay, R. H. 1978. Application of an acetate peel technique to

  17. Unexpectedly higher metazoan meiofauna abundances in the Kuril-Kamchatka Trench compared to the adjacent abyssal plains

    NASA Astrophysics Data System (ADS)

    Schmidt, Christina; Martínez Arbizu, Pedro

    2015-01-01

    We studied meiofauna standing stocks and community structure in the Kuril-Kamchatka Trench and its adjacent abyssal plains in the northwestern Pacific Ocean. In general, the Nematoda were dominant (93%) followed by the Copepoda (4%). Nematode abundances ranged from 87% to 96%; those of copepods from 2% to 7%. The most diverse deployment yielded 17 taxa: Acari, Amphipoda, Annelida, Bivalvia, Coelenterata, Copepoda, Cumacea, Gastrotricha, Isopoda, Kinorhyncha, Loricifera, Nematoda, Ostracoda, Priapulida, Tanaidacea, Tantulocarida, and Tardigrada. Nauplii were also present. Generally, the trench slope and the southernmost deployments had the highest abundances (850-1392 individuals/cm2). The results of non-metric multidimensional scaling indicated that these deployments were similar to each other in meiofauna community structure. The southernmost deployments were located in a zone of higher particulate organic carbon (POC) flux (g Corg m-2 yr-1), whereas the trench slope should have low POC flux due to depth attenuation. Also, POC and abundance were significantly correlated in the abyssal plains. This correlation may explain the higher abundances at the southernmost deployments. Lateral transport was also assumed to explain high meiofauna abundances on the trench slope. Abundances were generally higher than expected from model results. ANOSIM revealed significant differences between the trench slope and the northern abyssal plains, between the central abyssal plains and the trench slope, between the trench slope and the southern abyssal plains, between the central and the southern abyssal plains, and between the central and northern deployments. The northern and southern abyssal plains did not differ significantly. In addition, a U-test revealed highly significant differences between the trench-slope and abyssal deployments. The taxa inhabited mostly the upper 0-3 cm of the sediment layer (Nematoda 80-90%; Copepoda 88-100%). The trench-slope and abyssal did not differ

  18. A detailed taxonomy of Upper Cretaceous and lower Tertiary Crassatellidae in the Eastern United States; an example of the nature of extinction at the boundary

    USGS Publications Warehouse

    Wingard, G. Lynn

    1993-01-01

    Current theories on the causes of extinction at the CretaceousTertiary boundary have been based on previously published data; however, few workers have stopped to ask the question, 'How good is the basic data set?' To test the accuracy of the published record, a quantitative and qualitative analysis of the Crassatellidae (Mollusca, Bivalvia) of the Gulf and Mid-Atlantic Coastal Plains of the United States for the Upper Cretaceous and lower Tertiary was conducted. Thirty-eight species names and four generic names are used in publications for the Crassatellidae within the geographic and stratigraphic constraints of this analysis. Fourteen of the 38 species names are represented by statistically valid numbers of specimens and were tested by using canonical discriminant analysis. All 38 names, with the exception of 1 invalid name and 4 names for which no representative specimen could be located, were evaluated qualitatively. The results show that the published fossil record is highly inaccurate. Only 8 valid, recognizable species exist in the Crassatellidae within the limits of this study, 14 names are synonymized, and 11 names are represented by indeterminate molds or poorly preserved specimens. Three of the four genera are well founded; the fourth is based on the juvenile of another genus and therefore synonymized. This detailed taxonomic analysis of the Crassatellidae illustrates that the published fossil record is not reliable. Calculations of evolutionary and paleobiologic significance based on poorly defined, overly split fossil groups, such as the Crassatellidae, are biased in the following ways: Rates of evolution and extinction are higher, Faunal turnover at mass extinctions appears more catastrophic, Species diversity is high, Average species durations are shortened, and Geographic ranges are restricted. The data on the taxonomically standardized Crassatellidae show evolutionary rates one-quarter to one-half that of the published fossil record; faunal change

  19. Erratum to "Large-scale mitochondrial COI gene sequence variability reflects the complex colonization history of the invasive soft-shell clam, Mya arenaria (L.) (Bivalvia)" [Estuar. Coast. Shelf Sci. 181 (2016) 256-265

    NASA Astrophysics Data System (ADS)

    Lasota, Rafal; Pierscieniak, Karolina; Garcia, Pascale; Simon-Bouhet, Benoit; Wolowicz, Maciej

    2017-03-01

    The publisher regrets a printing error in the last paragraph in the Results section. The correct text should read as follows: Tajima's D, Fu and Li's D* and F*, and Fu's Fs were negative for all American populations, and statistically significant in most cases (Table 3). In most of the European populations the values of neutrality tests were positive, but not statistically significant. The highest positive values of neutrality tests were noted in the populations from Reykjavik (Iceland) and Dublin (Ireland) (Table 3).

  20. Cretaceous honeycomb oysters (Pycnodonte vesicularis) as palaeoseasonality records: A multi-proxy study

    NASA Astrophysics Data System (ADS)

    de Winter, Niels J.; Vellekoop, Johan; Vorsselmans, Robin; Golreihan, Asefeh; Petersen, Sierra V.; Meyer, Kyle W.; Speijer, Robert P.; Claeys, Philippe

    2017-04-01

    Pycnodonte or "honeycomb-oysters" (Bivalvia: Gryphaeidea) is an extinct genus of calcite-producing bivalves which is found in abundance in Cretaceous to Pleistocene fossil beds worldwide. As such, Pycnodonte shells could be ideal tracers of palaeoclimate through time, with the capability to reconstruct sea water conditions and palaeotemperatures in a range of palaeoenvironmental settings. Only few studies have attempted to reconstruct palaeoclimate based on Pycnodonte shells and with variable degrees of success (e.g. Videt, 2003; Huyge et al., 2015). Our study investigates the shell growth, structure and chemical characteristics of Maastrichtian Pycnodonte vesicularis from Bajada de Jaguel in Argentina and aims to rigorously test the application of multiple palaeoenvironmental proxies on the shells of several Maastrichtian Pycnodonte oysters for palaeoclimate reconstruction. The preservation state of four calcite shells was assessed by fluorescence microscopy, cathodoluminescence and micro X-Ray Fluorescence (XRF) mapping. Their shell structure was investigated using a combination of XRF mapping, high-resolution color scanning and microCT scanning. Long integration time point-by-point XRF line scanning yielded high-resolution trace element profiles through the hinge of all shells. Microdrilled samples from the same locations on the shell were analyzed for trace element composition by ICP-MS and for stable carbon and oxygen isotopes by IRMS. Preservation of the calcite microstructure was found to be of sufficient quality to allow discussion of original shell porosity, annual growth increments and pristine chemical signatures of the bivalves. The combination of fluorescence and cathodoluminescence microscopy with XRF mapping and microCT scanning sheds light on the characteristic internal "honeycomb" structure of these extinct bivalves and allows comparison with that of the related extant Neopycnodonte bivalves (Wisshak et al., 2009). Furthermore, high resolution

  1. Genomic in situ hybridization in interspecific hybrids of scallops (Bivalvia, Pectinidae) and localization of the satellite DNA Cf303, and the vertebrate telomeric sequences (TTAGGG)n on chromosomes of scallop Chlamys farreri (Jones & Preston, 1904)

    PubMed Central

    Hu, Liping; Jiang, Liming; Bi, Ke; Liao, Huan; Yang, Zujing; Huang, Xiaoting; Bao, Zhenmin

    2018-01-01

    Abstract Mitotic chromosome preparations of the interspecific hybrids Chlamys farreri (Jones & Preston, 1904) × Patinopecten yessoensis (Jay, 1857), C. farreri × Argopecten irradians (Lamarck, 1819) and C. farreri × Mimachlamys nobilis (Reeve, 1852) were used to compare two different scallop genomes in a single slide. Although genomic in situ hybridization (GISH) using genomic DNA from each scallop species as probe painted mitotic chromosomes of the interspecific hybrids, the painting results were not uniform; instead it showed species-specific distribution patterns of fluorescent signals among the chromosomes. The most prominent GISH-bands were mainly located at centromeric or telomeric regions of scallop chromosomes. In order to illustrate the sequence constitution of the GISH-bands, the satellite Cf303 sequences of C. farreri and the vertebrate telomeric (TTAGGG)n sequences were used to map mitotic chromosomes of C. farreri by fluorescence in situ hybridization (FISH). The results indicated that the GISH-banding pattern presented by the chromosomes of C. farreri is mainly due to the distribution of the satellite Cf303 DNA, therefore suggesting that the GISH-banding patterns found in the other three scallops could also be the result of the chromosomal distribution of other species-specific satellite DNAs. PMID:29675138

  2. Genomic in situ hybridization in interspecific hybrids of scallops (Bivalvia, Pectinidae) and localization of the satellite DNA Cf303, and the vertebrate telomeric sequences (TTAGGG)n on chromosomes of scallop Chlamys farreri (Jones & Preston, 1904).

    PubMed

    Hu, Liping; Jiang, Liming; Bi, Ke; Liao, Huan; Yang, Zujing; Huang, Xiaoting; Bao, Zhenmin

    2018-01-01

    Mitotic chromosome preparations of the interspecific hybrids Chlamys farreri (Jones & Preston, 1904) × Patinopecten yessoensis (Jay, 1857), C. farreri × Argopecten irradians (Lamarck, 1819) and C. farreri × Mimachlamys nobilis (Reeve, 1852) were used to compare two different scallop genomes in a single slide. Although genomic in situ hybridization (GISH) using genomic DNA from each scallop species as probe painted mitotic chromosomes of the interspecific hybrids, the painting results were not uniform; instead it showed species-specific distribution patterns of fluorescent signals among the chromosomes. The most prominent GISH-bands were mainly located at centromeric or telomeric regions of scallop chromosomes. In order to illustrate the sequence constitution of the GISH-bands, the satellite Cf303 sequences of C. farreri and the vertebrate telomeric (TTAGGG) n sequences were used to map mitotic chromosomes of C. farreri by fluorescence in situ hybridization (FISH). The results indicated that the GISH-banding pattern presented by the chromosomes of C. farreri is mainly due to the distribution of the satellite Cf303 DNA, therefore suggesting that the GISH-banding patterns found in the other three scallops could also be the result of the chromosomal distribution of other species-specific satellite DNAs.

  3. Physically disturbed deep-sea macrofauna in the Peru Basin, southeast Pacific, revisited 7 years after the experimental impact

    NASA Astrophysics Data System (ADS)

    Borowski, Christian

    regression slopes of variance-to-mean ratios of faunal abundances ( p<0.05) and enhanced spatial aggregation at the levels of higher macrofauna taxa and polychaete families. Hurlbert rarefaction E( Sn) and Shannon's diversity index H' calculated in non-standard ways for polychaete species revealed that patterns of diminished "diversity" in the disturbed treatments, which were observed during the later DISCOL period, were still present after 7 years, although the intensity of this signal became weaker. Recent abundance differences between treatments for the Bivalvia, Cumacea and the sigalionid polychaete species Leanira sp. A suggested that unploughed areas from the experimental field possibly were also affected by subtle long-term influences of particle plume settlement caused by the disturber action. A brief comparison with macrofauna abundance data from other ATESEPP sample locations in the Peru Basin revealed highest similarity between the sites located in the manganese nodule province, suggesting that similar disturbance effects can be expected for these areas. Nevertheless, the experimental impact by far did not reach industrial mining impact dimensions and interpretation of the results with regard to commercial mining requires caution.

  4. Freshwater Mussels (Mollusca: Bivalvia: Unionidae) of the Upper Mississippi River: Observations at Selected Sites Within the 9-Foot Navigation Channel Project for the St. Paul District, United States Army Corps of Engineers, 1977 - 1979. Volume I. Text.

    DTIC Science & Technology

    1980-09-10

    Island Bank Repair .................. 37 38. Teepeeota Point . . . . . . . . . . . . . . . . 38 39. Grand Encampment ...... ................ 38 40. Beef ...34 132 201, 224 37. Crats Island Bank Repair 35 133 .201, 224 38. Teepeeota Point 36 134 201, 225 39. Grand Encampment 37 135 201, 225 40. Beef Slough...These high levels of dredging and the moving bedload that requires them combine to create an environment that essentially is hazardous to mussels. There

  5. Freshwater Mussels (Mollusca: Bivalvia: Unionidae) of the Upper Mississippi River: Observations at Selected Sites Within the 9-Foot Navigation Channel Project for the St. Paul District, United States Army Corps of Engineers, 1977 - 1979. Volume II. Appendices.

    DTIC Science & Technology

    1980-09-10

    are alphabetized. Omitted from the list is the one relevant host that is not a fish: Necturus m . maculosus (Rafinesque), the Mudpuppy, which is a...macrochirus Rafinesque, Bluegill L. megaictis (Rafinesque), Longear Sunfish Micropterus do lomieui Lac6p~de, Smallmouth Bass M . saimoides (Lac6pbde...89) The field personnel indicated hy their initials in the Exhibits may be identified according to the fol loiing legend. lA -- ldwa rd Amb rog i o M

  6. Diplodon shells from Northwest Patagonia as continental proxy archives: Oxygen isotopic results and sclerochronological analyses

    NASA Astrophysics Data System (ADS)

    Soldati, A. L.; Beierlein, L.; Jacob, D. E.

    2009-04-01

    Freshwater mussels of the genus Diplodon (Bivalvia, Hyriidae) are the most abundant bivalve (today and in the past) in freshwater bodies at both sides of the South-Andean Cordillera. There are about 25 different Diplodon genera in Argentina and Chile that could be assigned almost completely to the species Diplodon chilensis (Gray, 1828) and two subspecies: D. ch. chilensis and D. ch. patagonicus; this latter species is found in Argentina between Mendoza (32˚ 52' S; 68˚ 51' W) and Chubut (45˚ 51' S; 67˚ 28' W), including the lakes and rivers of the target area, the Nahuel Huapi National Park (Castellanos, 1960). Despite their wide geographic distribution, Diplodon species have only rarely been used as climate archives in the southern hemisphere. Kaandorp et al. (2005) demonstrated for Diplodon longulus (Conrad 1874) collected from the Peruvian Amazonas that oxygen isotopic patterns in the shells could be used in order to reconstruct the precipitation regime and dry/wet seasonal of the monsoonal system in Amazonia. Although this study demonstrated the potential of Diplodon in climatological and ecological reconstructions in the southern hemisphere, as of yet, no systematic study of Diplodon as a multi-proxy archive has been undertaken for the Patagonian region. In this work we present sclerochronological analyses supported by ^18Oshell in recent mussel of Diplodon chilensis patagonicus (D'Orbigny, 1835) collected at Laguna El Trébol (42°S-71°W, Patagonia Argentina), one of the best studied water bodies in the region for paleoclimate analysis. Water temperature was measured every six hours for one year using a temperature sensor (Starmon mini®) placed at 5m depth in the lake, close to a mussel bank. Additionally, ^18Owater was measured monthly for the same time range.g^18Oshell values obtained by micro-milling at high spatial resolution in the growth increments of three Diplodon shells were compared to these records, and to air temperature and

  7. Biomineralisation in Mollusc shells

    NASA Astrophysics Data System (ADS)

    Dauphin, Y.; Cuif, J. P.; Salomé, M.; Williams, C. T.

    2009-04-01

    The main components of Mollusc shells are carbonate minerals: calcite and aragonite. ACC is present in larval stages. Calcite and aragonite can be secreted simultaneously by the mantle. Despite the small number of varieties, the arrangement of the mineral components is diverse, and dependant upon the taxonomy. They are also associated with organic components much more diverse, the diversity of which reflects the large taxonomic diversity. From TGA analyses, the organic content (water included) is high (>5% in some layers). The biomineralisation process is not a passive precipitation process, but is strongly controlled by the organism. The biological-genetic control is shown by the constancy of the arrangement of the layers, the mineralogy and the microstructure in a given species. Microstructural units (i.e. tablets, prisms etc.) have shapes that do not occur in non-biogenic counterparts. Nacreous tablets, for example, are flattened on their crystallographic c axis, which is normally the axis of maximum growth rate for non-biogenic aragonite. Morever, their inner structure is species-specific: the arrangements of nacreous tablets in Gastropoda - Cephalopoda, and in Bivalvia differ, and the inner arrangement of the nacreous tablets is different in ectocochlear and endocochlear Cephalopoda. The organic-mineral ratios also differ in the various layers of a shell. Differences in chemical composition also demonstrates the biological-genetic control: for example, aragonite has a low Sr content unknown in non-biogenic samples; two aragonitic layers in a shell have different Sr and Mg contents, S is higher in calcitic layers. Decalcification releases soluble (SOM) and insoluble (IOM) organic components. Insoluble components form the main part of the intercrystalline membranes, and contain proteins, polysaccharides and lipids. Soluble phases are present within the crystals and the intercrystalline membranes. These phases are composed of more or less glycosylated proteins