Electrostatics of cysteine residues in proteins: Parameterization and validation of a simple model
Salsbury, Freddie R.; Poole, Leslie B.; Fetrow, Jacquelyn S.
2013-01-01
One of the most popular and simple models for the calculation of pKas from a protein structure is the semi-macroscopic electrostatic model MEAD. This model requires empirical parameters for each residue to calculate pKas. Analysis of current, widely used empirical parameters for cysteine residues showed that they did not reproduce expected cysteine pKas; thus, we set out to identify parameters consistent with the CHARMM27 force field that capture both the behavior of typical cysteines in proteins and the behavior of cysteines which have perturbed pKas. The new parameters were validated in three ways: (1) calculation across a large set of typical cysteines in proteins (where the calculations are expected to reproduce expected ensemble behavior); (2) calculation across a set of perturbed cysteines in proteins (where the calculations are expected to reproduce the shifted ensemble behavior); and (3) comparison to experimentally determined pKa values (where the calculation should reproduce the pKa within experimental error). Both the general behavior of cysteines in proteins and the perturbed pKa in some proteins can be predicted reasonably well using the newly determined empirical parameters within the MEAD model for protein electrostatics. This study provides the first general analysis of the electrostatics of cysteines in proteins, with specific attention paid to capturing both the behavior of typical cysteines in a protein and the behavior of cysteines whose pKa should be shifted, and validation of force field parameters for cysteine residues. PMID:22777874
Convergence in parameters and predictions using computational experimental design.
Hagen, David R; White, Jacob K; Tidor, Bruce
2013-08-06
Typically, biological models fitted to experimental data suffer from significant parameter uncertainty, which can lead to inaccurate or uncertain predictions. One school of thought holds that accurate estimation of the true parameters of a biological system is inherently problematic. Recent work, however, suggests that optimal experimental design techniques can select sets of experiments whose members probe complementary aspects of a biochemical network that together can account for its full behaviour. Here, we implemented an experimental design approach for selecting sets of experiments that constrain parameter uncertainty. We demonstrated with a model of the epidermal growth factor-nerve growth factor pathway that, after synthetically performing a handful of optimal experiments, the uncertainty in all 48 parameters converged below 10 per cent. Furthermore, the fitted parameters converged to their true values with a small error consistent with the residual uncertainty. When untested experimental conditions were simulated with the fitted models, the predicted species concentrations converged to their true values with errors that were consistent with the residual uncertainty. This paper suggests that accurate parameter estimation is achievable with complementary experiments specifically designed for the task, and that the resulting parametrized models are capable of accurate predictions.
Determination of JWL Parameters for Non-Ideal Explosive
NASA Astrophysics Data System (ADS)
Hamashima, H.; Kato, Y.; Itoh, S.
2004-07-01
JWL equation of state is widely used in numerical simulation of detonation phenomena. JWL parameters are determined by cylinder test. Detonation characteristics of non-ideal explosive depend strongly on confinement, and JWL parameters determined by cylinder test do not represent the state of detonation products in many applications. We developed a method to determine JWL parameters from the underwater explosion test. JWL parameters were determined through a method of characteristics applied to the configuration of the underwater shock waves of cylindrical explosives. The numerical results obtained using JWL parameters determined by the underwater explosion test and those obtained using JWL parameters determined by cylinder test were compared with experimental results for typical non-ideal explosive; emulsion explosive. Good agreement was confirmed between the results obtained using JWL parameters determined by the underwater explosion test and experimental results.
Electrostatics of cysteine residues in proteins: parameterization and validation of a simple model.
Salsbury, Freddie R; Poole, Leslie B; Fetrow, Jacquelyn S
2012-11-01
One of the most popular and simple models for the calculation of pK(a) s from a protein structure is the semi-macroscopic electrostatic model MEAD. This model requires empirical parameters for each residue to calculate pK(a) s. Analysis of current, widely used empirical parameters for cysteine residues showed that they did not reproduce expected cysteine pK(a) s; thus, we set out to identify parameters consistent with the CHARMM27 force field that capture both the behavior of typical cysteines in proteins and the behavior of cysteines which have perturbed pK(a) s. The new parameters were validated in three ways: (1) calculation across a large set of typical cysteines in proteins (where the calculations are expected to reproduce expected ensemble behavior); (2) calculation across a set of perturbed cysteines in proteins (where the calculations are expected to reproduce the shifted ensemble behavior); and (3) comparison to experimentally determined pK(a) values (where the calculation should reproduce the pK(a) within experimental error). Both the general behavior of cysteines in proteins and the perturbed pK(a) in some proteins can be predicted reasonably well using the newly determined empirical parameters within the MEAD model for protein electrostatics. This study provides the first general analysis of the electrostatics of cysteines in proteins, with specific attention paid to capturing both the behavior of typical cysteines in a protein and the behavior of cysteines whose pK(a) should be shifted, and validation of force field parameters for cysteine residues. Copyright © 2012 Wiley Periodicals, Inc.
Review: Optimization methods for groundwater modeling and management
NASA Astrophysics Data System (ADS)
Yeh, William W.-G.
2015-09-01
Optimization methods have been used in groundwater modeling as well as for the planning and management of groundwater systems. This paper reviews and evaluates the various optimization methods that have been used for solving the inverse problem of parameter identification (estimation), experimental design, and groundwater planning and management. Various model selection criteria are discussed, as well as criteria used for model discrimination. The inverse problem of parameter identification concerns the optimal determination of model parameters using water-level observations. In general, the optimal experimental design seeks to find sampling strategies for the purpose of estimating the unknown model parameters. A typical objective of optimal conjunctive-use planning of surface water and groundwater is to minimize the operational costs of meeting water demand. The optimization methods include mathematical programming techniques such as linear programming, quadratic programming, dynamic programming, stochastic programming, nonlinear programming, and the global search algorithms such as genetic algorithms, simulated annealing, and tabu search. Emphasis is placed on groundwater flow problems as opposed to contaminant transport problems. A typical two-dimensional groundwater flow problem is used to explain the basic formulations and algorithms that have been used to solve the formulated optimization problems.
Performance of finned thermal capacitors. Ph.D. Thesis - Texas Univ., Austin
NASA Technical Reports Server (NTRS)
Humphries, W. R.
1974-01-01
The performance of typical thermal capacitors, both in earth and orbital environments, was investigated. Techniques which were used to make predictions of thermal behavior in a one-g earth environment are outlined. Orbital performance parameters are qualitatively discussed, and those effects expected to be important under zero-g conditions are outlined. A summary of thermal capacitor applications are documentated, along with significant problem areas and current configurations. An experimental program was conducted to determine typical one-g performance, and the physical significance of these data is discussed in detail. Numerical techniques were employed to allow comparison between analytical and experimental data.
High Performance Input/Output for Parallel Computer Systems
NASA Technical Reports Server (NTRS)
Ligon, W. B.
1996-01-01
The goal of our project is to study the I/O characteristics of parallel applications used in Earth Science data processing systems such as Regional Data Centers (RDCs) or EOSDIS. Our approach is to study the runtime behavior of typical programs and the effect of key parameters of the I/O subsystem both under simulation and with direct experimentation on parallel systems. Our three year activity has focused on two items: developing a test bed that facilitates experimentation with parallel I/O, and studying representative programs from the Earth science data processing application domain. The Parallel Virtual File System (PVFS) has been developed for use on a number of platforms including the Tiger Parallel Architecture Workbench (TPAW) simulator, The Intel Paragon, a cluster of DEC Alpha workstations, and the Beowulf system (at CESDIS). PVFS provides considerable flexibility in configuring I/O in a UNIX- like environment. Access to key performance parameters facilitates experimentation. We have studied several key applications fiom levels 1,2 and 3 of the typical RDC processing scenario including instrument calibration and navigation, image classification, and numerical modeling codes. We have also considered large-scale scientific database codes used to organize image data.
NASA Technical Reports Server (NTRS)
Grosveld, F.; Navaneethan, R.; Roskam, J.
1981-01-01
This paper presents results of a systematic experimental investigation of parameters which affect sound transmission through general aviation structures. Parameters studied include angle of sound incidence, panel curvature, panel stresses, and edge conditions for bare panels; pane thickness, spacing, inclination of window panes, and depressurization for dual pane windows; densities of hard foam and sound absorption materials, air gaps, and trim panel thickness for multilayered panels. Based on the study, some promising methods for reducing interior noise in general aviation airplanes are discussed.
Simulation of atmospheric PAH emissions from diesel engines.
Durán, A; de Lucas, A; Carmona, M; Ballesteros, R
2001-08-01
Simulation of atmospheric PAH emissions in a typical European passenger car diesel engine at steady conditions or under a certification cycle is made using in-house software. It is based on neural fitting of experimental data from eight different fuels tested under five operating steady conditions (reproducing modes of the European transient urban/extraurban certification cycle). The software allows the determination of PAH emissions as a function of the fuel composition parameters (aromatic content, cetane index, gross heat power, nitrogen and sulphur content) and operation conditions (torque and engine speed). The mathematical model reproduces experimental data with a maximum error of 20%. This tool is very useful, since changes in parameters can be made without experimental cost and the trend in modifications in PAH emissions is immediately obvious.
Blade selection for a modern axial-flow compressor
NASA Technical Reports Server (NTRS)
Wright, L. C.
1974-01-01
The procedures leading to successful design of an axial flow compressor are discussed. The three related approaches to cascade selection are: (1) experimental approach which relies on the use of experimental results from identical cascades to satisfy the velocity diagrams calculated, (2) a purely analytical procedure whereby blade shapes are calculated from the theoretical cascade and viscous flow equations, and (3) a semiempirical procedure which used experimental data together with the theoretically derived functional relations to relate the cascade parameters. Diagrams of typical transonic blade sections with uncambered leading edges are presented.
Transient Response of a PEM Fuel Cell Representing Variable Load for a Moving Vehicle on Urban Roads
DOT National Transportation Integrated Search
2001-01-01
Three-dimensional numerical simulation of transient response of a Polymer Electrolyte Membrane (PEM) fuel cell subjected to a variable load is developed. The model parameters are typical of experimental cell for a 10-cm2 reactive area with serpentine...
Fast and accurate fitting and filtering of noisy exponentials in Legendre space.
Bao, Guobin; Schild, Detlev
2014-01-01
The parameters of experimentally obtained exponentials are usually found by least-squares fitting methods. Essentially, this is done by minimizing the mean squares sum of the differences between the data, most often a function of time, and a parameter-defined model function. Here we delineate a novel method where the noisy data are represented and analyzed in the space of Legendre polynomials. This is advantageous in several respects. First, parameter retrieval in the Legendre domain is typically two orders of magnitude faster than direct fitting in the time domain. Second, data fitting in a low-dimensional Legendre space yields estimates for amplitudes and time constants which are, on the average, more precise compared to least-squares-fitting with equal weights in the time domain. Third, the Legendre analysis of two exponentials gives satisfactory estimates in parameter ranges where least-squares-fitting in the time domain typically fails. Finally, filtering exponentials in the domain of Legendre polynomials leads to marked noise removal without the phase shift characteristic for conventional lowpass filters.
Estimation of beech pyrolysis kinetic parameters by Shuffled Complex Evolution.
Ding, Yanming; Wang, Changjian; Chaos, Marcos; Chen, Ruiyu; Lu, Shouxiang
2016-01-01
The pyrolysis kinetics of a typical biomass energy feedstock, beech, was investigated based on thermogravimetric analysis over a wide heating rate range from 5K/min to 80K/min. A three-component (corresponding to hemicellulose, cellulose and lignin) parallel decomposition reaction scheme was applied to describe the experimental data. The resulting kinetic reaction model was coupled to an evolutionary optimization algorithm (Shuffled Complex Evolution, SCE) to obtain model parameters. To the authors' knowledge, this is the first study in which SCE has been used in the context of thermogravimetry. The kinetic parameters were simultaneously optimized against data for 10, 20 and 60K/min heating rates, providing excellent fits to experimental data. Furthermore, it was shown that the optimized parameters were applicable to heating rates (5 and 80K/min) beyond those used to generate them. Finally, the predicted results based on optimized parameters were contrasted with those based on the literature. Copyright © 2015 Elsevier Ltd. All rights reserved.
Parametric and experimental analysis using a power flow approach
NASA Technical Reports Server (NTRS)
Cuschieri, J. M.
1990-01-01
A structural power flow approach for the analysis of structure-borne transmission of vibrations is used to analyze the influence of structural parameters on transmitted power. The parametric analysis is also performed using the Statistical Energy Analysis approach and the results are compared with those obtained using the power flow approach. The advantages of structural power flow analysis are demonstrated by comparing the type of results that are obtained by the two analytical methods. Also, to demonstrate that the power flow results represent a direct physical parameter that can be measured on a typical structure, an experimental study of structural power flow is presented. This experimental study presents results for an L shaped beam for which an available solution was already obtained. Various methods to measure vibrational power flow are compared to study their advantages and disadvantages.
Disorder-induced losses in photonic crystal waveguides with line defects.
Gerace, Dario; Andreani, Lucio Claudio
2004-08-15
A numerical analysis of extrinsic diffraction losses in two-dimensional photonic crystal slabs with line defects is reported. To model disorder, a Gaussian distribution of hole radii in the triangular lattice of airholes is assumed. The extrinsic losses below the light line increase quadratically with the disorder parameter, decrease slightly with increasing core thickness, and depend weakly on the hole radius. For typical values of the disorder parameter the calculated loss values of guided modes below the light line compare favorably with available experimental results.
An ignored variable: solution preparation temperature in protein crystallization.
Chen, Rui-Qing; Lu, Qin-Qin; Cheng, Qing-Di; Ao, Liang-Bo; Zhang, Chen-Yan; Hou, Hai; Liu, Yong-Ming; Li, Da-Wei; Yin, Da-Chuan
2015-01-19
Protein crystallization is affected by many parameters, among which certain parameters have not been well controlled. The temperature at which the protein and precipitant solutions are mixed (i.e., the ambient temperature during mixing) is such a parameter that is typically not well controlled and is often ignored. In this paper, we show that this temperature can influence protein crystallization. The experimental results showed that both higher and lower mixing temperatures can enhance the success of crystallization, which follows a parabolic curve with an increasing ambient temperature. This work illustrates that the crystallization solution preparation temperature is also an important parameter for protein crystallization. Uncontrolled or poorly controlled room temperature may yield poor reproducibility in protein crystallization.
Fast and Accurate Fitting and Filtering of Noisy Exponentials in Legendre Space
Bao, Guobin; Schild, Detlev
2014-01-01
The parameters of experimentally obtained exponentials are usually found by least-squares fitting methods. Essentially, this is done by minimizing the mean squares sum of the differences between the data, most often a function of time, and a parameter-defined model function. Here we delineate a novel method where the noisy data are represented and analyzed in the space of Legendre polynomials. This is advantageous in several respects. First, parameter retrieval in the Legendre domain is typically two orders of magnitude faster than direct fitting in the time domain. Second, data fitting in a low-dimensional Legendre space yields estimates for amplitudes and time constants which are, on the average, more precise compared to least-squares-fitting with equal weights in the time domain. Third, the Legendre analysis of two exponentials gives satisfactory estimates in parameter ranges where least-squares-fitting in the time domain typically fails. Finally, filtering exponentials in the domain of Legendre polynomials leads to marked noise removal without the phase shift characteristic for conventional lowpass filters. PMID:24603904
Effects of human running cadence and experimental validation of the bouncing ball model
NASA Astrophysics Data System (ADS)
Bencsik, László; Zelei, Ambrus
2017-05-01
The biomechanical analysis of human running is a complex problem, because of the large number of parameters and degrees of freedom. However, simplified models can be constructed, which are usually characterized by some fundamental parameters, like step length, foot strike pattern and cadence. The bouncing ball model of human running is analysed theoretically and experimentally in this work. It is a minimally complex dynamic model when the aim is to estimate the energy cost of running and the tendency of ground-foot impact intensity as a function of cadence. The model shows that cadence has a direct effect on energy efficiency of running and ground-foot impact intensity. Furthermore, it shows that higher cadence implies lower risk of injury and better energy efficiency. An experimental data collection of 121 amateur runners is presented. The experimental results validate the model and provides information about the walk-to-run transition speed and the typical development of cadence and grounded phase ratio in different running speed ranges.
NASA Astrophysics Data System (ADS)
Križan, Peter; Matúš, Miloš; Beniak, Juraj; Šooš, Ľubomír
2018-01-01
During the biomass densification can be recognized various technological variables and also material parameters which significantly influences the final solid biofuels (pellets) quality. In this paper, we will present the research findings concerning relationships between technological and material variables during densification of sunflower hulls. Sunflower hulls as an unused source is a typical product of agricultural industry in Slovakia and belongs to the group of herbaceous biomass. The main goal of presented experimental research is to determine the impact of compression pressure, compression temperature and material particle size distribution on final biofuels quality. Experimental research described in this paper was realized by single-axis densification, which was represented by experimental pressing stand. The impact of mentioned investigated variables on the final briquettes density and briquettes dilatation was determined. Mutual interactions of these variables on final briquettes quality are showing the importance of mentioned variables during the densification process. Impact of raw material particle size distribution on final biofuels quality was also proven by experimental research on semi-production pelleting plant.
Singh, Tarini; Laub, Ruth; Burgard, Jan Pablo; Frings, Christian
2018-05-01
Selective attention refers to the ability to selectively act upon relevant information at the expense of irrelevant information. Yet, in many experimental tasks, what happens to the representation of the irrelevant information is still debated. Typically, 2 approaches to distractor processing have been suggested, namely distractor inhibition and distractor-based retrieval. However, it is also typical that both processes are hard to disentangle. For instance, in the negative priming literature (for a review Frings, Schneider, & Fox, 2015) this has been a continuous debate since the early 1980s. In the present study, we attempted to prove that both processes exist, but that they reflect distractor processing at different levels of representation. Distractor inhibition impacts stimulus representation, whereas distractor-based retrieval impacts mainly motor processes. We investigated both processes in a distractor-priming task, which enables an independent measurement of both processes. For our argument that both processes impact different levels of distractor representation, we estimated the exponential parameter (τ) and Gaussian components (μ, σ) of the exponential Gaussian reaction-time (RT) distribution, which have previously been used to independently test the effects of cognitive and motor processes (e.g., Moutsopoulou & Waszak, 2012). The distractor-based retrieval effect was evident for the Gaussian component, which is typically discussed as reflecting motor processes, but not for the exponential parameter, whereas the inhibition component was evident for the exponential parameter, which is typically discussed as reflecting cognitive processes, but not for the Gaussian parameter. (PsycINFO Database Record (c) 2018 APA, all rights reserved).
Kinetic analysis of single molecule FRET transitions without trajectories
NASA Astrophysics Data System (ADS)
Schrangl, Lukas; Göhring, Janett; Schütz, Gerhard J.
2018-03-01
Single molecule Förster resonance energy transfer (smFRET) is a popular tool to study biological systems that undergo topological transitions on the nanometer scale. smFRET experiments typically require recording of long smFRET trajectories and subsequent statistical analysis to extract parameters such as the states' lifetimes. Alternatively, analysis of probability distributions exploits the shapes of smFRET distributions at well chosen exposure times and hence works without the acquisition of time traces. Here, we describe a variant that utilizes statistical tests to compare experimental datasets with Monte Carlo simulations. For a given model, parameters are varied to cover the full realistic parameter space. As output, the method yields p-values which quantify the likelihood for each parameter setting to be consistent with the experimental data. The method provides suitable results even if the actual lifetimes differ by an order of magnitude. We also demonstrated the robustness of the method to inaccurately determine input parameters. As proof of concept, the new method was applied to the determination of transition rate constants for Holliday junctions.
Calibration of micromechanical parameters for DEM simulations by using the particle filter
NASA Astrophysics Data System (ADS)
Cheng, Hongyang; Shuku, Takayuki; Thoeni, Klaus; Yamamoto, Haruyuki
2017-06-01
The calibration of DEM models is typically accomplished by trail and error. However, the procedure lacks of objectivity and has several uncertainties. To deal with these issues, the particle filter is employed as a novel approach to calibrate DEM models of granular soils. The posterior probability distribution of the microparameters that give numerical results in good agreement with the experimental response of a Toyoura sand specimen is approximated by independent model trajectories, referred as `particles', based on Monte Carlo sampling. The soil specimen is modeled by polydisperse packings with different numbers of spherical grains. Prepared in `stress-free' states, the packings are subjected to triaxial quasistatic loading. Given the experimental data, the posterior probability distribution is incrementally updated, until convergence is reached. The resulting `particles' with higher weights are identified as the calibration results. The evolutions of the weighted averages and posterior probability distribution of the micro-parameters are plotted to show the advantage of using a particle filter, i.e., multiple solutions are identified for each parameter with known probabilities of reproducing the experimental response.
Steven's orbital reduction factor in ionic clusters
NASA Astrophysics Data System (ADS)
Gajek, Z.; Mulak, J.
1985-11-01
General expressions for reduction coefficients of matrix elements of angular momentum operator in ionic clusters or molecular systems have been derived. The reduction in this approach results from overlap and covalency effects and plays an important role in the reconciling of magnetic and spectroscopic experimental data. The formulated expressions make possible a phenomenological description of the effect with two independent parameters for typical equidistant clusters. Some detailed calculations also suggest the possibility of a one-parameter description. The results of these calculations for some ionic uranium compounds are presented as an example.
Limitations of Lifting-Line Theory for Estimation of Aileron Hinge-Moment Characteristics
NASA Technical Reports Server (NTRS)
Swanson, Robert S.; Gillis, Clarence L.
1943-01-01
Hinge-moment parameters for several typical ailerons were calculated from section data with the aspect-ratio correction as usually determined from lifting-line theory. The calculations showed that the agreement between experimental and calculated results was unsatisfactory. An additional aspect-ratio correction, calculated by the method of lifting-surface theory, was applied to the slope of the curve of hinge-moment coefficient against angle of attack at small angles of attack. This so-called streamline-curvature correction brought the calculated and experimental results into satisfactory agreement.
UV-VIS absorption spectroscopy: Lambert-Beer reloaded
NASA Astrophysics Data System (ADS)
Mäntele, Werner; Deniz, Erhan
2017-02-01
UV-VIS absorption spectroscopy is used in almost every spectroscopy laboratory for routine analysis or research. All spectroscopists rely on the Lambert-Beer Law but many of them are less aware of its limitations. This tutorial discusses typical problems in routine spectroscopy that come along with technical limitations or careless selection of experimental parameters. Simple rules are provided to avoid these problems.
Cao, Jianping; Xiong, Jianyin; Wang, Lixin; Xu, Ying; Zhang, Yinping
2016-09-06
Solid-phase microextraction (SPME) is regarded as a nonexhaustive sampling technique with a smaller extraction volume and a shorter extraction time than traditional sampling techniques and is hence widely used. The SPME sampling process is affected by the convection or diffusion effect along the coating surface, but this factor has seldom been studied. This paper derives an analytical model to characterize SPME sampling for semivolatile organic compounds (SVOCs) as well as for volatile organic compounds (VOCs) by considering the surface mass transfer process. Using this model, the chemical concentrations in a sample matrix can be conveniently calculated. In addition, the model can be used to determine the characteristic parameters (partition coefficient and diffusion coefficient) for typical SPME chemical samplings (SPME calibration). Experiments using SPME samplings of two typical SVOCs, dibutyl phthalate (DBP) in sealed chamber and di(2-ethylhexyl) phthalate (DEHP) in ventilated chamber, were performed to measure the two characteristic parameters. The experimental results demonstrated the effectiveness of the model and calibration method. Experimental data from the literature (VOCs sampled by SPME) were used to further validate the model. This study should prove useful for relatively rapid quantification of concentrations of different chemicals in various circumstances with SPME.
NASA Astrophysics Data System (ADS)
Li, F.; Nie, Z.; Wu, Y. P.; Guo, B.; Zhang, X. H.; Huang, S.; Zhang, J.; Cheng, Z.; Ma, Y.; Fang, Y.; Zhang, C. J.; Wan, Y.; Xu, X. L.; Hua, J. F.; Pai, C. H.; Lu, W.; Mori, W. B.
2018-04-01
We report the transverse phase space diagnostics for electron beams generated through ionization injection in a laser-plasma accelerator. Single-shot measurements of both ultimate emittance and Twiss parameters are achieved by means of permanent magnetic quadrupole. Beams with emittance of μm rad level are obtained in a typical ionization injection scheme, and the dependence on nitrogen concentration and charge density is studied experimentally and confirmed by simulations. A key feature of the transverse phase space, matched beams with Twiss parameter α T ≃ 0, is identified according to the measurement. Numerical simulations that are in qualitative agreement with the experimental results reveal that a sufficient phase mixing induced by an overlong injection length leads to the matched phase space distribution.
TrackEtching - A Java based code for etched track profile calculations in SSNTDs
NASA Astrophysics Data System (ADS)
Muraleedhara Varier, K.; Sankar, V.; Gangadathan, M. P.
2017-09-01
A java code incorporating a user friendly GUI has been developed to calculate the parameters of chemically etched track profiles of ion-irradiated solid state nuclear track detectors. Huygen's construction of wavefronts based on secondary wavelets has been used to numerically calculate the etched track profile as a function of the etching time. Provision for normal incidence and oblique incidence on the detector surface has been incorporated. Results in typical cases are presented and compared with experimental data. Different expressions for the variation of track etch rate as a function of the ion energy have been utilized. The best set of values of the parameters in the expressions can be obtained by comparing with available experimental data. Critical angle for track development can also be calculated using the present code.
An ignored variable: solution preparation temperature in protein crystallization
Chen, Rui-Qing; Lu, Qin-Qin; Cheng, Qing-Di; Ao, Liang-Bo; Zhang, Chen-Yan; Hou, Hai; Liu, Yong-Ming; Li, Da-Wei; Yin, Da-Chuan
2015-01-01
Protein crystallization is affected by many parameters, among which certain parameters have not been well controlled. The temperature at which the protein and precipitant solutions are mixed (i.e., the ambient temperature during mixing) is such a parameter that is typically not well controlled and is often ignored. In this paper, we show that this temperature can influence protein crystallization. The experimental results showed that both higher and lower mixing temperatures can enhance the success of crystallization, which follows a parabolic curve with an increasing ambient temperature. This work illustrates that the crystallization solution preparation temperature is also an important parameter for protein crystallization. Uncontrolled or poorly controlled room temperature may yield poor reproducibility in protein crystallization. PMID:25597864
NASA Technical Reports Server (NTRS)
Tuttle, M. E.; Brinson, H. F.
1986-01-01
The impact of flight error in measured viscoelastic parameters on subsequent long-term viscoelastic predictions is numerically evaluated using the Schapery nonlinear viscoelastic model. Of the seven Schapery parameters, the results indicated that long-term predictions were most sensitive to errors in the power law parameter n. Although errors in the other parameters were significant as well, errors in n dominated all other factors at long times. The process of selecting an appropriate short-term test cycle so as to insure an accurate long-term prediction was considered, and a short-term test cycle was selected using material properties typical for T300/5208 graphite-epoxy at 149 C. The process of selection is described, and its individual steps are itemized.
Parameter recovery, bias and standard errors in the linear ballistic accumulator model.
Visser, Ingmar; Poessé, Rens
2017-05-01
The linear ballistic accumulator (LBA) model (Brown & Heathcote, , Cogn. Psychol., 57, 153) is increasingly popular in modelling response times from experimental data. An R package, glba, has been developed to fit the LBA model using maximum likelihood estimation which is validated by means of a parameter recovery study. At sufficient sample sizes parameter recovery is good, whereas at smaller sample sizes there can be large bias in parameters. In a second simulation study, two methods for computing parameter standard errors are compared. The Hessian-based method is found to be adequate and is (much) faster than the alternative bootstrap method. The use of parameter standard errors in model selection and inference is illustrated in an example using data from an implicit learning experiment (Visser et al., , Mem. Cogn., 35, 1502). It is shown that typical implicit learning effects are captured by different parameters of the LBA model. © 2017 The British Psychological Society.
Alam, Maksudul; Deng, Xinwei; Philipson, Casandra; Bassaganya-Riera, Josep; Bisset, Keith; Carbo, Adria; Eubank, Stephen; Hontecillas, Raquel; Hoops, Stefan; Mei, Yongguo; Abedi, Vida; Marathe, Madhav
2015-01-01
Agent-based models (ABM) are widely used to study immune systems, providing a procedural and interactive view of the underlying system. The interaction of components and the behavior of individual objects is described procedurally as a function of the internal states and the local interactions, which are often stochastic in nature. Such models typically have complex structures and consist of a large number of modeling parameters. Determining the key modeling parameters which govern the outcomes of the system is very challenging. Sensitivity analysis plays a vital role in quantifying the impact of modeling parameters in massively interacting systems, including large complex ABM. The high computational cost of executing simulations impedes running experiments with exhaustive parameter settings. Existing techniques of analyzing such a complex system typically focus on local sensitivity analysis, i.e. one parameter at a time, or a close “neighborhood” of particular parameter settings. However, such methods are not adequate to measure the uncertainty and sensitivity of parameters accurately because they overlook the global impacts of parameters on the system. In this article, we develop novel experimental design and analysis techniques to perform both global and local sensitivity analysis of large-scale ABMs. The proposed method can efficiently identify the most significant parameters and quantify their contributions to outcomes of the system. We demonstrate the proposed methodology for ENteric Immune SImulator (ENISI), a large-scale ABM environment, using a computational model of immune responses to Helicobacter pylori colonization of the gastric mucosa. PMID:26327290
Alam, Maksudul; Deng, Xinwei; Philipson, Casandra; Bassaganya-Riera, Josep; Bisset, Keith; Carbo, Adria; Eubank, Stephen; Hontecillas, Raquel; Hoops, Stefan; Mei, Yongguo; Abedi, Vida; Marathe, Madhav
2015-01-01
Agent-based models (ABM) are widely used to study immune systems, providing a procedural and interactive view of the underlying system. The interaction of components and the behavior of individual objects is described procedurally as a function of the internal states and the local interactions, which are often stochastic in nature. Such models typically have complex structures and consist of a large number of modeling parameters. Determining the key modeling parameters which govern the outcomes of the system is very challenging. Sensitivity analysis plays a vital role in quantifying the impact of modeling parameters in massively interacting systems, including large complex ABM. The high computational cost of executing simulations impedes running experiments with exhaustive parameter settings. Existing techniques of analyzing such a complex system typically focus on local sensitivity analysis, i.e. one parameter at a time, or a close "neighborhood" of particular parameter settings. However, such methods are not adequate to measure the uncertainty and sensitivity of parameters accurately because they overlook the global impacts of parameters on the system. In this article, we develop novel experimental design and analysis techniques to perform both global and local sensitivity analysis of large-scale ABMs. The proposed method can efficiently identify the most significant parameters and quantify their contributions to outcomes of the system. We demonstrate the proposed methodology for ENteric Immune SImulator (ENISI), a large-scale ABM environment, using a computational model of immune responses to Helicobacter pylori colonization of the gastric mucosa.
Wieser, Stefan; Axmann, Markus; Schütz, Gerhard J.
2008-01-01
We propose here an approach for the analysis of single-molecule trajectories which is based on a comprehensive comparison of an experimental data set with multiple Monte Carlo simulations of the diffusion process. It allows quantitative data analysis, particularly whenever analytical treatment of a model is infeasible. Simulations are performed on a discrete parameter space and compared with the experimental results by a nonparametric statistical test. The method provides a matrix of p-values that assess the probability for having observed the experimental data at each setting of the model parameters. We show the testing approach for three typical situations observed in the cellular plasma membrane: i), free Brownian motion of the tracer, ii), hop diffusion of the tracer in a periodic meshwork of squares, and iii), transient binding of the tracer to slowly diffusing structures. By plotting the p-value as a function of the model parameters, one can easily identify the most consistent parameter settings but also recover mutual dependencies and ambiguities which are difficult to determine by standard fitting routines. Finally, we used the test to reanalyze previous data obtained on the diffusion of the glycosylphosphatidylinositol-protein CD59 in the plasma membrane of the human T24 cell line. PMID:18805933
Kumar, M Senthil; Schwartz, Russell
2010-12-09
Virus capsid assembly has been a key model system for studies of complex self-assembly but it does pose some significant challenges for modeling studies. One important limitation is the difficulty of determining accurate rate parameters. The large size and rapid assembly of typical viruses make it infeasible to directly measure coat protein binding rates or deduce them from the relatively indirect experimental measures available. In this work, we develop a computational strategy to deduce coat-coat binding rate parameters for viral capsid assembly systems by fitting stochastic simulation trajectories to experimental measures of assembly progress. Our method combines quadratic response surface and quasi-gradient descent approximations to deal with the high computational cost of simulations, stochastic noise in simulation trajectories and limitations of the available experimental data. The approach is demonstrated on a light scattering trajectory for a human papillomavirus (HPV) in vitro assembly system, showing that the method can provide rate parameters that produce accurate curve fits and are in good concordance with prior analysis of the data. These fits provide an insight into potential assembly mechanisms of the in vitro system and give a basis for exploring how these mechanisms might vary between in vitro and in vivo assembly conditions.
NASA Astrophysics Data System (ADS)
Senthil Kumar, M.; Schwartz, Russell
2010-12-01
Virus capsid assembly has been a key model system for studies of complex self-assembly but it does pose some significant challenges for modeling studies. One important limitation is the difficulty of determining accurate rate parameters. The large size and rapid assembly of typical viruses make it infeasible to directly measure coat protein binding rates or deduce them from the relatively indirect experimental measures available. In this work, we develop a computational strategy to deduce coat-coat binding rate parameters for viral capsid assembly systems by fitting stochastic simulation trajectories to experimental measures of assembly progress. Our method combines quadratic response surface and quasi-gradient descent approximations to deal with the high computational cost of simulations, stochastic noise in simulation trajectories and limitations of the available experimental data. The approach is demonstrated on a light scattering trajectory for a human papillomavirus (HPV) in vitro assembly system, showing that the method can provide rate parameters that produce accurate curve fits and are in good concordance with prior analysis of the data. These fits provide an insight into potential assembly mechanisms of the in vitro system and give a basis for exploring how these mechanisms might vary between in vitro and in vivo assembly conditions.
ADMIT: a toolbox for guaranteed model invalidation, estimation and qualitative–quantitative modeling
Streif, Stefan; Savchenko, Anton; Rumschinski, Philipp; Borchers, Steffen; Findeisen, Rolf
2012-01-01
Summary: Often competing hypotheses for biochemical networks exist in the form of different mathematical models with unknown parameters. Considering available experimental data, it is then desired to reject model hypotheses that are inconsistent with the data, or to estimate the unknown parameters. However, these tasks are complicated because experimental data are typically sparse, uncertain, and are frequently only available in form of qualitative if–then observations. ADMIT (Analysis, Design and Model Invalidation Toolbox) is a MatLabTM-based tool for guaranteed model invalidation, state and parameter estimation. The toolbox allows the integration of quantitative measurement data, a priori knowledge of parameters and states, and qualitative information on the dynamic or steady-state behavior. A constraint satisfaction problem is automatically generated and algorithms are implemented for solving the desired estimation, invalidation or analysis tasks. The implemented methods built on convex relaxation and optimization and therefore provide guaranteed estimation results and certificates for invalidity. Availability: ADMIT, tutorials and illustrative examples are available free of charge for non-commercial use at http://ifatwww.et.uni-magdeburg.de/syst/ADMIT/ Contact: stefan.streif@ovgu.de PMID:22451270
Streif, Stefan; Savchenko, Anton; Rumschinski, Philipp; Borchers, Steffen; Findeisen, Rolf
2012-05-01
Often competing hypotheses for biochemical networks exist in the form of different mathematical models with unknown parameters. Considering available experimental data, it is then desired to reject model hypotheses that are inconsistent with the data, or to estimate the unknown parameters. However, these tasks are complicated because experimental data are typically sparse, uncertain, and are frequently only available in form of qualitative if-then observations. ADMIT (Analysis, Design and Model Invalidation Toolbox) is a MatLab(TM)-based tool for guaranteed model invalidation, state and parameter estimation. The toolbox allows the integration of quantitative measurement data, a priori knowledge of parameters and states, and qualitative information on the dynamic or steady-state behavior. A constraint satisfaction problem is automatically generated and algorithms are implemented for solving the desired estimation, invalidation or analysis tasks. The implemented methods built on convex relaxation and optimization and therefore provide guaranteed estimation results and certificates for invalidity. ADMIT, tutorials and illustrative examples are available free of charge for non-commercial use at http://ifatwww.et.uni-magdeburg.de/syst/ADMIT/
NASA Astrophysics Data System (ADS)
Li, Xiang; Yao, Zhiyuan; He, Yigang; Dai, Shichao
2017-09-01
Ultrasonic motor operation relies on high-frequency vibration of a piezoelectric vibrator and interface friction between the stator and rotor/slider, which can cause temperature rise of the motor under continuous operation, and can affect motor parameters and performance in turn. In this paper, an integral model is developed to study the thermal-mechanical-electric coupling dynamics in a typical standing wave ultrasonic motor. Stick-slip motion at the contact interface and the temperature dependence of material parameters of the stator are taken into account in this model. The elastic, piezoelectric and dielectric material coefficients of the piezoelectric ceramic, as a function of temperature, are determined experimentally using a resonance method. The critical parameters in the model are identified via measured results. The resulting model can be used to evaluate the variation in output characteristics of the motor caused by the thermal-mechanical-electric coupling effects. Furthermore, the dynamic temperature rise of the motor can be accurately predicted under different input parameters using the developed model, which will contribute to improving the reliable life of a motor for long-term running.
Overview of refinement procedures within REFMAC5: utilizing data from different sources.
Kovalevskiy, Oleg; Nicholls, Robert A; Long, Fei; Carlon, Azzurra; Murshudov, Garib N
2018-03-01
Refinement is a process that involves bringing into agreement the structural model, available prior knowledge and experimental data. To achieve this, the refinement procedure optimizes a posterior conditional probability distribution of model parameters, including atomic coordinates, atomic displacement parameters (B factors), scale factors, parameters of the solvent model and twin fractions in the case of twinned crystals, given observed data such as observed amplitudes or intensities of structure factors. A library of chemical restraints is typically used to ensure consistency between the model and the prior knowledge of stereochemistry. If the observation-to-parameter ratio is small, for example when diffraction data only extend to low resolution, the Bayesian framework implemented in REFMAC5 uses external restraints to inject additional information extracted from structures of homologous proteins, prior knowledge about secondary-structure formation and even data obtained using different experimental methods, for example NMR. The refinement procedure also generates the `best' weighted electron-density maps, which are useful for further model (re)building. Here, the refinement of macromolecular structures using REFMAC5 and related tools distributed as part of the CCP4 suite is discussed.
Research on Potential Induced Degradation (PID) of PV Modules in Different Typical Climate Regions
NASA Astrophysics Data System (ADS)
Daoren, Gong; Yingnan, Chen; Gang, Sun; Wenjing, Wang; Zhenshuang, Ji
2018-03-01
Potential Induced Degradation (PID) is one of the most important factors effecting the performances of Photovoltaic (PV) modules and PV systems in recent years. In this paper the PID phenomena of the PV power plant in different typical climate regions were studied and some experimental PID simulations were carried out in order to find out the factors effecting the performance by PID. The results show that the typical PID phenomena are easy to occur in cells close to the border of the PV module. PID phenomena can appear in PV power plants under different climate conditions, but the effecting degrees on module performance are different depending on temperature, humidity and other parameters. We also find the maximum power would recover in some degree after positive-bias voltage duration.
NASA Astrophysics Data System (ADS)
Pathak, M. G.; Helvensteijn, B. P.; Patel, V. C.; Ghiaasiaan, S. M.; Mulcahey, T. I.; Kashani, A.; Feller, J. R.
2014-01-01
The regenerator, typically a microporous structure that is subject to periodic flow of a cryogenic fluid, is a critical component of pulse tube or Stirling cryocoolers, which are widely used for high-demand aerospace and defense applications. In this investigation, experiments were conducted in which steady and oscillatory flows of helium were imposed on ErPr rare-Earth regenerator filler material and mass flow and pressure drop data were recorded under ambient temperature conditions. A computational fluid dynamics (CFD)-assisted method was applied for the analysis and interpretation of the experimental data. The permeability and inertial coefficients that lead to agreement between the experimental data and computational simulations were iteratively obtained. The Darcy permeability and Forchheimer inertial coefficients were obtained and were found to be functions of the system charge pressure, operating frequency, and compressor piston stroke within the studied range of interest. The results also exhibit that the periodic flow hydrodynamic resistance parameters are in general different than steady flow parameters.
Bartesaghi, Davide; Pérez, Irene del Carmen; Kniepert, Juliane; Roland, Steffen; Turbiez, Mathieu; Neher, Dieter; Koster, L. Jan Anton
2015-01-01
Among the parameters that characterize a solar cell and define its power-conversion efficiency, the fill factor is the least well understood, making targeted improvements difficult. Here we quantify the competition between charge extraction and recombination by using a single parameter θ, and we demonstrate that this parameter is directly related to the fill factor of many different bulk-heterojunction solar cells. Our finding is supported by experimental measurements on 15 different donor:acceptor combinations, as well as by drift-diffusion simulations of organic solar cells in which charge-carrier mobilities, recombination rate, light intensity, energy levels and active-layer thickness are all varied over wide ranges to reproduce typical experimental conditions. The results unify the fill factors of several very different donor:acceptor combinations and give insight into why fill factors change so much with thickness, light intensity and materials properties. To achieve fill factors larger than 0.8 requires further improvements in charge transport while reducing recombination. PMID:25947637
NASA Astrophysics Data System (ADS)
Fiorenti, Simone; Guanetti, Jacopo; Guezennec, Yann; Onori, Simona
2013-11-01
This paper presents the development and experimental validation of a dynamic model of a Hybridized Energy Storage System (HESS) consisting of a parallel connection of a lead acid (PbA) battery and double layer capacitors (DLCs), for automotive applications. The dynamic modeling of both the PbA battery and the DLC has been tackled via the equivalent electric circuit based approach. Experimental tests are designed for identification purposes. Parameters of the PbA battery model are identified as a function of state of charge and current direction, whereas parameters of the DLC model are identified for different temperatures. A physical HESS has been assembled at the Center for Automotive Research The Ohio State University and used as a test-bench to validate the model against a typical current profile generated for Start&Stop applications. The HESS model is then integrated into a vehicle simulator to assess the effects of the battery hybridization on the vehicle fuel economy and mitigation of the battery stress.
Numerical and Experimental Investigations of Humping Phenomena in Laser Micro Welding
NASA Astrophysics Data System (ADS)
Otto, Andreas; Patschger, Andreas; Seiler, Michael
The Humping effect is a phenomenon which is observed approximately since 50 years in various welding procedures and is characterized by droplets due to a pile-up of the melt pool. It occurs within a broad range of process parameters. Particularly during micro welding, humping effect is critical due to typically high feed rates. In the past, essentially two approaches (fluid-dynamic approach of streaming melt within the molten pool and the Plateau-Rayleigh instability of a liquid jet) were discussed in order to explain the occurrence of the humping effect. But none of both can fully explain all observed effects. For this reason, experimental studies in micro welding of thin metal foils were performed in order to determine the influence of process parameters on the occurrence of humping effects. The experimental observations were compared with results from numerical multi-physical simulations (incorporating beam propagation, incoupling, heat transfer, fluid dynamics etc.) to provide a deeper understanding of the causes for hump formation.
Desova, A A; Dorofeyuk, A A; Anokhin, A M
2017-01-01
We performed a comparative analysis of the types of spectral density typical of various parameters of pulse signal. The experimental material was obtained during the examination of school age children with various psychosomatic disorders. We also performed a typological analysis of the spectral density functions corresponding to the time series of different parameters of a single oscillation of pulse signals; the results of their comparative analysis are presented. We determined the most significant spectral components for two disordersin children: arterial hypertension and mitral valve prolapse.
NASA Astrophysics Data System (ADS)
Li, Xin; Menenti, Massimo
2010-10-01
The general objective of project 5322 in the Dragon 2 programme is to quantitatively retrieve some key eco- hydrological parameters by using remote sensed data, especially from ESA, Chinese, and the Third Party Mission (TPM). To achieve this goal, a comprehensive observation experiment, Watershed Allied Telemetry Experimental Research (WATER) was carried out. WARER is a simultaneously airborne, satellite-borne, and ground-based remote sensing experiment took place in the Heihe River Basin, a typical inland river basin in the northwest of China. This paper introduces the background and implementation of WATER. Data have been obtained so far are described in details. After a period of data analysis for two years, numerous results have also been achieved. This paper presents some early results of WATER as well.
Model Parameter Variability for Enhanced Anaerobic Bioremediation of DNAPL Source Zones
NASA Astrophysics Data System (ADS)
Mao, X.; Gerhard, J. I.; Barry, D. A.
2005-12-01
The objective of the Source Area Bioremediation (SABRE) project, an international collaboration of twelve companies, two government agencies and three research institutions, is to evaluate the performance of enhanced anaerobic bioremediation for the treatment of chlorinated ethene source areas containing dense, non-aqueous phase liquids (DNAPL). This 4-year, 5.7 million dollars research effort focuses on a pilot-scale demonstration of enhanced bioremediation at a trichloroethene (TCE) DNAPL field site in the United Kingdom, and includes a significant program of laboratory and modelling studies. Prior to field implementation, a large-scale, multi-laboratory microcosm study was performed to determine the optimal system properties to support dehalogenation of TCE in site soil and groundwater. This statistically-based suite of experiments measured the influence of key variables (electron donor, nutrient addition, bioaugmentation, TCE concentration and sulphate concentration) in promoting the reductive dechlorination of TCE to ethene. As well, a comprehensive biogeochemical numerical model was developed for simulating the anaerobic dehalogenation of chlorinated ethenes. An appropriate (reduced) version of this model was combined with a parameter estimation method based on fitting of the experimental results. Each of over 150 individual microcosm calibrations involved matching predicted and observed time-varying concentrations of all chlorinated compounds. This study focuses on an analysis of this suite of fitted model parameter values. This includes determining the statistical correlation between parameters typically employed in standard Michaelis-Menten type rate descriptions (e.g., maximum dechlorination rates, half-saturation constants) and the key experimental variables. The analysis provides insight into the degree to which aqueous phase TCE and cis-DCE inhibit dechlorination of less-chlorinated compounds. Overall, this work provides a database of the numerical modelling parameters typically employed for simulating TCE dechlorination relevant for a range of system conditions (e.g, bioaugmented, high TCE concentrations, etc.). The significance of the obtained variability of parameters is illustrated with one-dimensional simulations of enhanced anaerobic bioremediation of residual TCE DNAPL.
UV-VIS absorption spectroscopy: Lambert-Beer reloaded.
Mäntele, Werner; Deniz, Erhan
2017-02-15
UV-VIS absorption spectroscopy is used in almost every spectroscopy laboratory for routine analysis or research. All spectroscopists rely on the Lambert-Beer Law but many of them are less aware of its limitations. This tutorial discusses typical problems in routine spectroscopy that come along with technical limitations or careless selection of experimental parameters. Simple rules are provided to avoid these problems. Copyright © 2016 Elsevier B.V. All rights reserved.
Advanced Method to Estimate Fuel Slosh Simulation Parameters
NASA Technical Reports Server (NTRS)
Schlee, Keith; Gangadharan, Sathya; Ristow, James; Sudermann, James; Walker, Charles; Hubert, Carl
2005-01-01
The nutation (wobble) of a spinning spacecraft in the presence of energy dissipation is a well-known problem in dynamics and is of particular concern for space missions. The nutation of a spacecraft spinning about its minor axis typically grows exponentially and the rate of growth is characterized by the Nutation Time Constant (NTC). For launch vehicles using spin-stabilized upper stages, fuel slosh in the spacecraft propellant tanks is usually the primary source of energy dissipation. For analytical prediction of the NTC this fuel slosh is commonly modeled using simple mechanical analogies such as pendulums or rigid rotors coupled to the spacecraft. Identifying model parameter values which adequately represent the sloshing dynamics is the most important step in obtaining an accurate NTC estimate. Analytic determination of the slosh model parameters has met with mixed success and is made even more difficult by the introduction of propellant management devices and elastomeric diaphragms. By subjecting full-sized fuel tanks with actual flight fuel loads to motion similar to that experienced in flight and measuring the forces experienced by the tanks these parameters can be determined experimentally. Currently, the identification of the model parameters is a laborious trial-and-error process in which the equations of motion for the mechanical analog are hand-derived, evaluated, and their results are compared with the experimental results. The proposed research is an effort to automate the process of identifying the parameters of the slosh model using a MATLAB/SimMechanics-based computer simulation of the experimental setup. Different parameter estimation and optimization approaches are evaluated and compared in order to arrive at a reliable and effective parameter identification process. To evaluate each parameter identification approach, a simple one-degree-of-freedom pendulum experiment is constructed and motion is induced using an electric motor. By applying the estimation approach to a simple, accurately modeled system, its effectiveness and accuracy can be evaluated. The same experimental setup can then be used with fluid-filled tanks to further evaluate the effectiveness of the process. Ultimately, the proven process can be applied to the full-sized spinning experimental setup to quickly and accurately determine the slosh model parameters for a particular spacecraft mission. Automating the parameter identification process will save time, allow more changes to be made to proposed designs, and lower the cost in the initial design stages.
Effects of temperature and mass conservation on the typical chemical sequences of hydrogen oxidation
NASA Astrophysics Data System (ADS)
Nicholson, Schuyler B.; Alaghemandi, Mohammad; Green, Jason R.
2018-01-01
Macroscopic properties of reacting mixtures are necessary to design synthetic strategies, determine yield, and improve the energy and atom efficiency of many chemical processes. The set of time-ordered sequences of chemical species are one representation of the evolution from reactants to products. However, only a fraction of the possible sequences is typical, having the majority of the joint probability and characterizing the succession of chemical nonequilibrium states. Here, we extend a variational measure of typicality and apply it to atomistic simulations of a model for hydrogen oxidation over a range of temperatures. We demonstrate an information-theoretic methodology to identify typical sequences under the constraints of mass conservation. Including these constraints leads to an improved ability to learn the chemical sequence mechanism from experimentally accessible data. From these typical sequences, we show that two quantities defining the variational typical set of sequences—the joint entropy rate and the topological entropy rate—increase linearly with temperature. These results suggest that, away from explosion limits, data over a narrow range of thermodynamic parameters could be sufficient to extrapolate these typical features of combustion chemistry to other conditions.
LHC constraints on color octet scalars
NASA Astrophysics Data System (ADS)
Hayreter, Alper; Valencia, German
2017-08-01
We extract constraints on the parameter space of the Manohar and Wise model by comparing the cross sections for dijet, top-pair, dijet-pair, t t ¯t t ¯ and b b ¯b b ¯ productions at the LHC with the strongest available experimental limits from ATLAS or CMS at 8 or 13 TeV. Overall we find mass limits around 1 TeV in the most sensitive regions of parameter space, and lower elsewhere. This is at odds with generic limits for color octet scalars often quoted in the literature where much larger production cross sections are assumed. The constraints that can be placed on coupling constants are typically weaker than those from existing theoretical considerations, with the exception of the parameter ηD.
Experimental discrimination of ion stopping models near the Bragg peak in highly ionized matter.
Cayzac, W; Frank, A; Ortner, A; Bagnoud, V; Basko, M M; Bedacht, S; Bläser, C; Blažević, A; Busold, S; Deppert, O; Ding, J; Ehret, M; Fiala, P; Frydrych, S; Gericke, D O; Hallo, L; Helfrich, J; Jahn, D; Kjartansson, E; Knetsch, A; Kraus, D; Malka, G; Neumann, N W; Pépitone, K; Pepler, D; Sander, S; Schaumann, G; Schlegel, T; Schroeter, N; Schumacher, D; Seibert, M; Tauschwitz, An; Vorberger, J; Wagner, F; Weih, S; Zobus, Y; Roth, M
2017-06-01
The energy deposition of ions in dense plasmas is a key process in inertial confinement fusion that determines the α-particle heating expected to trigger a burn wave in the hydrogen pellet and resulting in high thermonuclear gain. However, measurements of ion stopping in plasmas are scarce and mostly restricted to high ion velocities where theory agrees with the data. Here, we report experimental data at low projectile velocities near the Bragg peak, where the stopping force reaches its maximum. This parameter range features the largest theoretical uncertainties and conclusive data are missing until today. The precision of our measurements, combined with a reliable knowledge of the plasma parameters, allows to disprove several standard models for the stopping power for beam velocities typically encountered in inertial fusion. On the other hand, our data support theories that include a detailed treatment of strong ion-electron collisions.
Experimental discrimination of ion stopping models near the Bragg peak in highly ionized matter
NASA Astrophysics Data System (ADS)
Cayzac, W.; Frank, A.; Ortner, A.; Bagnoud, V.; Basko, M. M.; Bedacht, S.; Bläser, C.; Blažević, A.; Busold, S.; Deppert, O.; Ding, J.; Ehret, M.; Fiala, P.; Frydrych, S.; Gericke, D. O.; Hallo, L.; Helfrich, J.; Jahn, D.; Kjartansson, E.; Knetsch, A.; Kraus, D.; Malka, G.; Neumann, N. W.; Pépitone, K.; Pepler, D.; Sander, S.; Schaumann, G.; Schlegel, T.; Schroeter, N.; Schumacher, D.; Seibert, M.; Tauschwitz, An.; Vorberger, J.; Wagner, F.; Weih, S.; Zobus, Y.; Roth, M.
2017-06-01
The energy deposition of ions in dense plasmas is a key process in inertial confinement fusion that determines the α-particle heating expected to trigger a burn wave in the hydrogen pellet and resulting in high thermonuclear gain. However, measurements of ion stopping in plasmas are scarce and mostly restricted to high ion velocities where theory agrees with the data. Here, we report experimental data at low projectile velocities near the Bragg peak, where the stopping force reaches its maximum. This parameter range features the largest theoretical uncertainties and conclusive data are missing until today. The precision of our measurements, combined with a reliable knowledge of the plasma parameters, allows to disprove several standard models for the stopping power for beam velocities typically encountered in inertial fusion. On the other hand, our data support theories that include a detailed treatment of strong ion-electron collisions.
Experimental discrimination of ion stopping models near the Bragg peak in highly ionized matter
Cayzac, W.; Frank, A.; Ortner, A.; Bagnoud, V.; Basko, M. M.; Bedacht, S.; Bläser, C.; Blažević, A.; Busold, S.; Deppert, O.; Ding, J.; Ehret, M.; Fiala, P.; Frydrych, S.; Gericke, D. O.; Hallo, L.; Helfrich, J.; Jahn, D.; Kjartansson, E.; Knetsch, A.; Kraus, D.; Malka, G.; Neumann, N. W.; Pépitone, K.; Pepler, D.; Sander, S.; Schaumann, G.; Schlegel, T.; Schroeter, N.; Schumacher, D.; Seibert, M.; Tauschwitz, An.; Vorberger, J.; Wagner, F.; Weih, S.; Zobus, Y.; Roth, M.
2017-01-01
The energy deposition of ions in dense plasmas is a key process in inertial confinement fusion that determines the α-particle heating expected to trigger a burn wave in the hydrogen pellet and resulting in high thermonuclear gain. However, measurements of ion stopping in plasmas are scarce and mostly restricted to high ion velocities where theory agrees with the data. Here, we report experimental data at low projectile velocities near the Bragg peak, where the stopping force reaches its maximum. This parameter range features the largest theoretical uncertainties and conclusive data are missing until today. The precision of our measurements, combined with a reliable knowledge of the plasma parameters, allows to disprove several standard models for the stopping power for beam velocities typically encountered in inertial fusion. On the other hand, our data support theories that include a detailed treatment of strong ion-electron collisions. PMID:28569766
NASA Astrophysics Data System (ADS)
Gillette, V. H.; Patiño, N. E.; Granada, J. R.; Mayer, R. E.
1989-08-01
Using a synthetic incoherent scattering function which describes the interaction of neutrons with molecular gases we provide analytical expressions for zero- and first-order scattering kernels, σ0( E0 → E), σ1( E0 → E), and total cross section σ0( E0). Based on these quantities, we have performed calculations of thermalization parameters and transport coefficients for H 2O, D 2O, C 6H 6 and (CH 2) n at room temperature. Comparison of such values with available experimental data and other calculations is satisfactory. We also generated nuclear data libraries for H 2O with 47 thermal groups at 300 K and performed some benchmark calculations ( 235U, 239Pu, PWR cell and typical APWR cell); the resulting reactivities are compared with experimental data and ENDF/B-IV calculations.
NASA Astrophysics Data System (ADS)
Dudaryonok, A. S.; Lavrentieva, N. N.; Buldyreva, J.
2018-06-01
(J, K)-line broadening and shift coefficients with their temperature-dependence characteristics are computed for the perpendicular (ΔK = ±1) ν6 band of the 12CH3D-N2 system. The computations are based on a semi-empirical approach which consists in the use of analytical Anderson-type expressions multiplied by a few-parameter correction factor to account for various deviations from Anderson's theory approximations. A mathematically convenient form of the correction factor is chosen on the basis of experimental rotational dependencies of line widths, and its parameters are fitted on some experimental line widths at 296 K. To get the unknown CH3D polarizability in the excited vibrational state v6 for line-shift calculations, a parametric vibration-state-dependent expression is suggested, with two parameters adjusted on some room-temperature experimental values of line shifts. Having been validated by comparison with available in the literature experimental values for various sub-branches of the band, this approach is used to generate massive data of line-shape parameters for extended ranges of rotational quantum numbers (J up to 70 and K up to 20) typically requested for spectroscopic databases. To obtain the temperature-dependence characteristics of line widths and line shifts, computations are done for various temperatures in the range 200-400 K recommended for HITRAN and least-squares fit procedures are applied. For the case of line widths strong sub-branch dependence with increasing K is observed in the R- and P-branches; for the line shifts such dependence is stated for the Q-branch.
Ismail, Ahmad Muhaimin; Mohamad, Mohd Saberi; Abdul Majid, Hairudin; Abas, Khairul Hamimah; Deris, Safaai; Zaki, Nazar; Mohd Hashim, Siti Zaiton; Ibrahim, Zuwairie; Remli, Muhammad Akmal
2017-12-01
Mathematical modelling is fundamental to understand the dynamic behavior and regulation of the biochemical metabolisms and pathways that are found in biological systems. Pathways are used to describe complex processes that involve many parameters. It is important to have an accurate and complete set of parameters that describe the characteristics of a given model. However, measuring these parameters is typically difficult and even impossible in some cases. Furthermore, the experimental data are often incomplete and also suffer from experimental noise. These shortcomings make it challenging to identify the best-fit parameters that can represent the actual biological processes involved in biological systems. Computational approaches are required to estimate these parameters. The estimation is converted into multimodal optimization problems that require a global optimization algorithm that can avoid local solutions. These local solutions can lead to a bad fit when calibrating with a model. Although the model itself can potentially match a set of experimental data, a high-performance estimation algorithm is required to improve the quality of the solutions. This paper describes an improved hybrid of particle swarm optimization and the gravitational search algorithm (IPSOGSA) to improve the efficiency of a global optimum (the best set of kinetic parameter values) search. The findings suggest that the proposed algorithm is capable of narrowing down the search space by exploiting the feasible solution areas. Hence, the proposed algorithm is able to achieve a near-optimal set of parameters at a fast convergence speed. The proposed algorithm was tested and evaluated based on two aspartate pathways that were obtained from the BioModels Database. The results show that the proposed algorithm outperformed other standard optimization algorithms in terms of accuracy and near-optimal kinetic parameter estimation. Nevertheless, the proposed algorithm is only expected to work well in small scale systems. In addition, the results of this study can be used to estimate kinetic parameter values in the stage of model selection for different experimental conditions. Copyright © 2017 Elsevier B.V. All rights reserved.
Effect of buoyancy on fuel containment in an open-cycle gas-core nuclear rocket engine.
NASA Technical Reports Server (NTRS)
Putre, H. A.
1971-01-01
Analysis aimed at determining the scaling laws for the buoyancy effect on fuel containment in an open-cycle gas-core nuclear rocket engine, so conducted that experimental conditions can be related to engine conditions. The fuel volume fraction in a short coaxial flow cavity is calculated with a programmed numerical solution of the steady Navier-Stokes equations for isothermal, variable density fluid mixing. A dimensionless parameter B, called the Buoyancy number, was found to correlate the fuel volume fraction for large accelerations and various density ratios. This parameter has the value B = 0 for zero acceleration, and B = 350 for typical engine conditions.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ali, E. S. M.; McEwen, M. R.; Rogers, D. W. O.
2012-11-15
Purpose: In a recent computational study, an improved physics-based approach was proposed for unfolding linac photon spectra and incident electron energies from transmission data. In this approach, energy differentiation is improved by simultaneously using transmission data for multiple attenuators and detectors, and the unfolding robustness is improved by using a four-parameter functional form to describe the photon spectrum. The purpose of the current study is to validate this approach experimentally, and to demonstrate its application on a typical clinical linac. Methods: The validation makes use of the recent transmission measurements performed on the Vickers research linac of National Research Councilmore » Canada. For this linac, the photon spectra were previously measured using a NaI detector, and the incident electron parameters are independently known. The transmission data are for eight beams in the range 10-30 MV using thick Be, Al and Pb bremsstrahlung targets. To demonstrate the approach on a typical clinical linac, new measurements are performed on an Elekta Precise linac for 6, 10 and 25 MV beams. The different experimental setups are modeled using EGSnrc, with the newly added photonuclear attenuation included. Results: For the validation on the research linac, the 95% confidence bounds of the unfolded spectra fall within the noise of the NaI data. The unfolded spectra agree with the EGSnrc spectra (calculated using independently known electron parameters) with RMS energy fluence deviations of 4.5%. The accuracy of unfolding the incident electron energy is shown to be {approx}3%. A transmission cutoff of only 10% is suitable for accurate unfolding, provided that the other components of the proposed approach are implemented. For the demonstration on a clinical linac, the unfolded incident electron energies and their 68% confidence bounds for the 6, 10 and 25 MV beams are 6.1 {+-} 0.1, 9.3 {+-} 0.1, and 19.3 {+-} 0.2 MeV, respectively. The unfolded spectra for the clinical linac agree with the EGSnrc spectra (calculated using the unfolded electron energies) with RMS energy fluence deviations of 3.7%. The corresponding measured and EGSnrc-calculated transmission data agree within 1.5%, where the typical transmission measurement uncertainty on the clinical linac is 0.4% (not including the uncertainties on the incident electron parameters). Conclusions: The approach proposed in an earlier study for unfolding photon spectra and incident electron energies from transmission data is accurate and practical for clinical use.« less
Adaptive hybrid optimal quantum control for imprecisely characterized systems.
Egger, D J; Wilhelm, F K
2014-06-20
Optimal quantum control theory carries a huge promise for quantum technology. Its experimental application, however, is often hindered by imprecise knowledge of the input variables, the quantum system's parameters. We show how to overcome this by adaptive hybrid optimal control, using a protocol named Ad-HOC. This protocol combines open- and closed-loop optimal control by first performing a gradient search towards a near-optimal control pulse and then an experimental fidelity estimation with a gradient-free method. For typical settings in solid-state quantum information processing, adaptive hybrid optimal control enhances gate fidelities by an order of magnitude, making optimal control theory applicable and useful.
Water absorption characteristics and structural properties of rice for sake brewing.
Mizuma, Tomochika; Kiyokawa, Yoshifumi; Wakai, Yoshinori
2008-09-01
This study investigated the water absorption curve characteristics and structural properties of rice used for sake brewing. The parameter values in the water absorption rate equation were calculated using experimental data. Differences between sample parameters for rice used for sake brewing and typical rice were confirmed. The water absorption curve for rice suitable for sake brewing showed a quantitatively sharper turn in the S-shaped water absorption curve than that of typical rice. Structural characteristics, including specific volume, grain density, and powdered density of polished rice, were measured by a liquid substitution method using a Gay-Lussac pycnometer. In addition, we calculated internal porosity from whole grain and powdered grain densities. These results showed that a decrease in internal porosity resulted from invasion of water into the rice grain, and that a decrease in the grain density affected expansion during the water absorption process. A characteristic S-shape water absorption curve for rice suitable for sake brewing was related to the existence of an invisible Shinpaku-like structure.
NASA Astrophysics Data System (ADS)
Trushlyakov, V. I.; Lesnyak, I. Y.; Galfetti, L.
2017-09-01
An evaporation of kerosene and water was investigated based on convective heat transfer in the experimental setup simulating a typical volume of the fuel tank of the launch vehicle. Basic criteria of similarity used in choosing the design parameters of the setup, parameters of the coolant and model liquids, were numbers of Reynolds, Prandtl, Biot, and Nusselt. The used coolants were gases, including air and nitrogen; in addition, at the stage of preliminary experiments, products of combustion of hydroxyl-terminated polybutadiene (HTPB) were considered. Boundary conditions were taken for the liquid located on the plate in the form of "drop" and at its uniform film spread in the experimental model setup. On the basis of experimental investigations, the temperature values were obtained for the system "gas-liquid-wall", and areas of mass transfer surface and heat transfer coefficients of "gas-liquid" and "gas-plate" were determined for coolants (air and nitrogen) and for liquids (water and kerosene). The comparative analysis of the obtained results and the known data was carried out. Proposals for experiments using coolants based on HTPB combustion products have been formulated.
Investigation of flowfields found in typical combustor geometries
NASA Technical Reports Server (NTRS)
Lilley, D. G.
1985-01-01
Activities undertaken during the entire course of research are summarized. Studies were concerned with experimental and theoretical research on 2-D axisymmetric geometries under low speed nonreacting, turbulent, swirling flow conditions typical of gas turbine and ramjet combustion chambers. They included recirculation zone characterization, time-mean and turbulence simulation in swirling recirculating flow, sudden and gradual expansion flowfields, and furher complexities and parameter influences. The study included the investigation of: a complete range of swirl strengths; swirler performance; downstream contraction nozzle sizes and locations; expansion ratios; and inlet side-wall angles. Their individual and combined effects on the test section flowfield were observed, measured and characterized. Experimental methods included flow visualization (with smoke and neutrally-buoyant helium-filled soap bubbles), five-hole pitot probe time-mean velocity field measurements, and single-, double-, and triple-wire hot-wire anemometry measurements of time-mean velocities, normal and shear Reynolds sresses. Computational methods included development of the STARPIC code from the primitive-variable TEACH computer code, and its use in flowfield prediction and turbulence model development.
Integrated design course of applied optics focusing on operating and maintaining abilities
NASA Astrophysics Data System (ADS)
Xu, Zhongjie; Ning, Yu; Jiang, Tian; Cheng, Xiangai
2017-08-01
The abilities of operating and maintaining optical instruments are crucial in modern society. Besides the basic knowledge in optics, the optics courses in the National University of Defense Technology also focus on the training on handling typical optical equipment. As the link between classroom courses on applied optics and the field trips, the integrated design course of applied optics aims to give the students a better understanding on several instantly used optical equipment, such as hand-held telescope and periscope, etc. The basic concepts of optical system design are also emphasized as well. The course is arranged rightly after the classroom course of applied optics and composed of experimental and design tasks. The experimental tasks include the measurements of aberrations and major parameters of a primitive telescope, while in the design parts, the students are asked to design a Keplerian telescope. The whole course gives a deepened understandings on the concepts, assembling, and operating of telescopes. The students are also encouraged to extend their interests on other typical optical instruments.
Evolutionary algorithm for vehicle driving cycle generation.
Perhinschi, Mario G; Marlowe, Christopher; Tamayo, Sergio; Tu, Jun; Wayne, W Scott
2011-09-01
Modeling transit bus emissions and fuel economy requires a large amount of experimental data over wide ranges of operational conditions. Chassis dynamometer tests are typically performed using representative driving cycles defined based on vehicle instantaneous speed as sequences of "microtrips", which are intervals between consecutive vehicle stops. Overall significant parameters of the driving cycle, such as average speed, stops per mile, kinetic intensity, and others, are used as independent variables in the modeling process. Performing tests at all the necessary combinations of parameters is expensive and time consuming. In this paper, a methodology is proposed for building driving cycles at prescribed independent variable values using experimental data through the concatenation of "microtrips" isolated from a limited number of standard chassis dynamometer test cycles. The selection of the adequate "microtrips" is achieved through a customized evolutionary algorithm. The genetic representation uses microtrip definitions as genes. Specific mutation, crossover, and karyotype alteration operators have been defined. The Roulette-Wheel selection technique with elitist strategy drives the optimization process, which consists of minimizing the errors to desired overall cycle parameters. This utility is part of the Integrated Bus Information System developed at West Virginia University.
Mechanistic equivalent circuit modelling of a commercial polymer electrolyte membrane fuel cell
NASA Astrophysics Data System (ADS)
Giner-Sanz, J. J.; Ortega, E. M.; Pérez-Herranz, V.
2018-03-01
Electrochemical impedance spectroscopy (EIS) has been widely used in the fuel cell field since it allows deconvolving the different physic-chemical processes that affect the fuel cell performance. Typically, EIS spectra are modelled using electric equivalent circuits. In this work, EIS spectra of an individual cell of a commercial PEM fuel cell stack were obtained experimentally. The goal was to obtain a mechanistic electric equivalent circuit in order to model the experimental EIS spectra. A mechanistic electric equivalent circuit is a semiempirical modelling technique which is based on obtaining an equivalent circuit that does not only correctly fit the experimental spectra, but which elements have a mechanistic physical meaning. In order to obtain the aforementioned electric equivalent circuit, 12 different models with defined physical meanings were proposed. These equivalent circuits were fitted to the obtained EIS spectra. A 2 step selection process was performed. In the first step, a group of 4 circuits were preselected out of the initial list of 12, based on general fitting indicators as the determination coefficient and the fitted parameter uncertainty. In the second step, one of the 4 preselected circuits was selected on account of the consistency of the fitted parameter values with the physical meaning of each parameter.
Flassig, Robert J; Migal, Iryna; der Zalm, Esther van; Rihko-Struckmann, Liisa; Sundmacher, Kai
2015-01-16
Understanding the dynamics of biological processes can substantially be supported by computational models in the form of nonlinear ordinary differential equations (ODE). Typically, this model class contains many unknown parameters, which are estimated from inadequate and noisy data. Depending on the ODE structure, predictions based on unmeasured states and associated parameters are highly uncertain, even undetermined. For given data, profile likelihood analysis has been proven to be one of the most practically relevant approaches for analyzing the identifiability of an ODE structure, and thus model predictions. In case of highly uncertain or non-identifiable parameters, rational experimental design based on various approaches has shown to significantly reduce parameter uncertainties with minimal amount of effort. In this work we illustrate how to use profile likelihood samples for quantifying the individual contribution of parameter uncertainty to prediction uncertainty. For the uncertainty quantification we introduce the profile likelihood sensitivity (PLS) index. Additionally, for the case of several uncertain parameters, we introduce the PLS entropy to quantify individual contributions to the overall prediction uncertainty. We show how to use these two criteria as an experimental design objective for selecting new, informative readouts in combination with intervention site identification. The characteristics of the proposed multi-criterion objective are illustrated with an in silico example. We further illustrate how an existing practically non-identifiable model for the chlorophyll fluorescence induction in a photosynthetic organism, D. salina, can be rendered identifiable by additional experiments with new readouts. Having data and profile likelihood samples at hand, the here proposed uncertainty quantification based on prediction samples from the profile likelihood provides a simple way for determining individual contributions of parameter uncertainties to uncertainties in model predictions. The uncertainty quantification of specific model predictions allows identifying regions, where model predictions have to be considered with care. Such uncertain regions can be used for a rational experimental design to render initially highly uncertain model predictions into certainty. Finally, our uncertainty quantification directly accounts for parameter interdependencies and parameter sensitivities of the specific prediction.
NASA Astrophysics Data System (ADS)
Bouaziz, Nadia; Ben Manaa, Marwa; Ben Lamine, Abdelmottaleb
2018-06-01
In the present work, experimental absorption and desorption isotherms of hydrogen in LaNi3.8Al1.0Mn0.2 metal at two temperatures (T = 433 K, 453 K) have been fitted using a monolayer model with two energies treated by statistical physics formalism by means of the grand canonical ensemble. Six parameters of the model are adjusted, namely the numbers of hydrogen atoms per site nα and nβ, the receptor site densities Nmα and Nmβ, and the energetic parameters Pα and Pβ. The behaviors of these parameters are discussed in relationship with temperature of absorption/desorption process. Then, a dynamic investigation of the simultaneous evolution with pressure of the two α and β phases in the absorption and desorption phenomena using the adjustment parameters. Thanks to the energetic parameters, we calculated the sorption energies which are typically ranged between 276.107 and 310.711 kJ/mol for absorption process and between 277.01 and 310.9 kJ/mol for desorption process comparable to usual chemical bond energies. The calculated thermodynamic parameters such as entropy, Gibbs free energy and internal energy from experimental data showed that the absorption/desorption of hydrogen in LaNi3.8Al1.0Mn0.2 alloy was feasible, spontaneous and exothermic in nature.
NASA Astrophysics Data System (ADS)
Lilichenko, Mark; Kelley, Anne Myers
2001-04-01
A novel approach is presented for finding the vibrational frequencies, Franck-Condon factors, and vibronic linewidths that best reproduce typical, poorly resolved electronic absorption (or fluorescence) spectra of molecules in condensed phases. While calculation of the theoretical spectrum from the molecular parameters is straightforward within the harmonic oscillator approximation for the vibrations, "inversion" of an experimental spectrum to deduce these parameters is not. Standard nonlinear least-squares fitting methods such as Levenberg-Marquardt are highly susceptible to becoming trapped in local minima in the error function unless very good initial guesses for the molecular parameters are made. Here we employ a genetic algorithm to force a broad search through parameter space and couple it with the Levenberg-Marquardt method to speed convergence to each local minimum. In addition, a neural network trained on a large set of synthetic spectra is used to provide an initial guess for the fitting parameters and to narrow the range searched by the genetic algorithm. The combined algorithm provides excellent fits to a variety of single-mode absorption spectra with experimentally negligible errors in the parameters. It converges more rapidly than the genetic algorithm alone and more reliably than the Levenberg-Marquardt method alone, and is robust in the presence of spectral noise. Extensions to multimode systems, and/or to include other spectroscopic data such as resonance Raman intensities, are straightforward.
Sperlich, Alexander; Werner, Arne; Genz, Arne; Amy, Gary; Worch, Eckhard; Jekel, Martin
2005-03-01
Breakthrough curves (BTC) for the adsorption of arsenate and salicylic acid onto granulated ferric hydroxide (GFH) in fixed-bed adsorbers were experimentally determined and modeled using the homogeneous surface diffusion model (HSDM). The input parameters for the HSDM, the Freundlich isotherm constants and mass transfer coefficients for film and surface diffusion, were experimentally determined. The BTC for salicylic acid revealed a shape typical for trace organic compound adsorption onto activated carbon, and model results agreed well with the experimental curves. Unlike salicylic acid, arsenate BTCs showed a non-ideal shape with a leveling off at c/c0 approximately 0.6. Model results based on the experimentally derived parameters over-predicted the point of arsenic breakthrough for all simulated curves, lab-scale or full-scale, and were unable to catch the shape of the curve. The use of a much lower surface diffusion coefficient D(S) for modeling led to an improved fit of the later stages of the BTC shape, pointing on a time-dependent D(S). The mechanism for this time dependence is still unknown. Surface precipitation was discussed as one possible removal mechanism for arsenate besides pure adsorption interfering the determination of Freundlich constants and D(S). Rapid small-scale column tests (RSSCT) proved to be a powerful experimental alternative to the modeling procedure for arsenic.
An analytical method of estimating turbine performance
NASA Technical Reports Server (NTRS)
Kochendorfer, Fred D; Nettles, J Cary
1949-01-01
A method is developed by which the performance of a turbine over a range of operating conditions can be analytically estimated from the blade angles and flow areas. In order to use the method, certain coefficients that determine the weight flow and the friction losses must be approximated. The method is used to calculate the performance of the single-stage turbine of a commercial aircraft gas-turbine engine and the calculated performance is compared with the performance indicated by experimental data. For the turbine of the typical example, the assumed pressure losses and the tuning angles give a calculated performance that represents the trends of the experimental performance with reasonable accuracy. The exact agreement between analytical performance and experimental performance is contingent upon the proper selection of a blading-loss parameter.
NASA Astrophysics Data System (ADS)
Han, Yun; Kuang, Shuang; Qi, Xiumei; Xie, Chunqian; Liu, Guanghui
Effects of galvanizing simulation parameters on microstructures and mechanical properties of Ti-microalloyed cold rolled hot-dip galvanizing DP980 steel were investigated in this study by optical microscopy (OM), transmission electron microscopy (TEM), energy dispersive spectroscopy (EDS) and tensile test. Moreover, the precipitation behavior of Ti in the experimental steel was also studied. The results show that, as the heating temperature increases, the tensile strength of experimental galvanizing DP980 steel decreases while the yield ratio and elongation of the steel are enhanced. The microstructures of experimental steels exhibit typical dual phase steel character and the volume fractions of MA islands are almost 30%. In addition, lots of nano-sized TiC precipitates can be found in the ferrite grains.
On the use of tower-flux measurements to assess the performance of global ecosystem models
NASA Astrophysics Data System (ADS)
El Maayar, M.; Kucharik, C.
2003-04-01
Global ecosystem models are important tools for the study of biospheric processes and their responses to environmental changes. Such models typically translate knowledge, gained from local observations, into estimates of regional or even global outcomes of ecosystem processes. A typical test of ecosystem models consists of comparing their output against tower-flux measurements of land surface-atmosphere exchange of heat and mass. To perform such tests, models are typically run using detailed information on soil properties (texture, carbon content,...) and vegetation structure observed at the experimental site (e.g., vegetation height, vegetation phenology, leaf photosynthetic characteristics,...). In global simulations, however, earth's vegetation is typically represented by a limited number of plant functional types (PFT; group of plant species that have similar physiological and ecological characteristics). For each PFT (e.g., temperate broadleaf trees, boreal conifer evergreen trees,...), which can cover a very large area, a set of typical physiological and physical parameters are assigned. Thus, a legitimate question arises: How does the performance of a global ecosystem model run using detailed site-specific parameters compare with the performance of a less detailed global version where generic parameters are attributed to a group of vegetation species forming a PFT? To answer this question, we used a multiyear dataset, measured at two forest sites with contrasting environments, to compare seasonal and interannual variability of surface-atmosphere exchange of water and carbon predicted by the Integrated BIosphere Simulator-Dynamic Global Vegetation Model. Two types of simulations were, thus, performed: a) Detailed runs: observed vegetation characteristics (leaf area index, vegetation height,...) and soil carbon content, in addition to climate and soil type, are specified for model run; and b) Generic runs: when only observed climates and soil types at the measurement sites are used to run the model. The generic runs were performed for the number of years equal to the current age of the forests, initialized with no vegetation and a soil carbon density equal to zero.
Security of Y-00 and Similar Quantum Cryptographic Protocols
2004-11-16
security of Y-00 type protocols is clarified. Key words: Quantum cryptography PACS: 03.67.Dd Anew approach to quantum cryptog- raphy called KCQ, ( keyed ...classical- noise key generation [2] or the well known BB84 quantum protocol [3]. A special case called αη (or Y-00 in Japan) has been experimentally in... quantum noise for typical op- erating parameters. It weakens both the data and key security , possibly information-theoretically and cer- tainly
NASA Astrophysics Data System (ADS)
Borisenok, V. A.; Medvedev, A. B.
2017-12-01
The results of numerical simulation of the behavior of a system consisting of a spherical bubble filled with nitrogen or its mixtures with argon and surrounding water under external influence typical of experimental study of single-bubble sonoluminescence are presented. Comparison of the results of calculations and experiments shows that gas heated at the bubble compression stage cannot be regarded as the only source of radiation. This circumstance requires the presence of other, basic, sources. In the polarization model, this is the channel of electrical breakdown in a liquid. Possible electrical effects accompanying the liquid-solid phase transformation in water near the moment of the maximum compression of the bubble are assumed.
Measurement of Gust Response on a Turbine Cascade
NASA Technical Reports Server (NTRS)
Kurkov, A. P.; Lucci, B. L.
1995-01-01
The paper presents benchmark experimental data on a gust response of an annular turbine cascade. The experiment was particularly designed to provide data for comparison with the results of a typical linearized gust-response analysis. Reduced frequency, Mach number, and incidence were varied independently. Except for the lowest reduced frequency, the gust velocity distribution was nearly sinusoidal. For the high inlet-velocity series of tests, the cascade was near choking. The mean flow was documented by measuring blade surface pressures and the cascade exit flow. High-response pressure transducers were used to measure the unsteady pressure distribution. Inlet-velocity components and turbulence parameters were measured using hot wire. In addition to the synchronous time-average pressure spectra, typical power spectra are included for several representative conditions.
Method for measuring changes in light absorption of highly scattering media
Bigio, Irving J.; Johnson, Tamara M.; Mourant, Judith R.
2002-01-01
The noninvasive measurement of variations in absorption that are due to changes in concentrations of biochemically relevant compounds in tissue is important in many clinical settings. One problem with such measurements is that the pathlength traveled by the collected light through the tissue depends on the scattering properties of the tissue. It is demonstrated, using both Monte Carlo simulations and experimental measurements, that for an appropriate separation between light-delivery and light-collection fibers, the pathlength of the collected photons is insensitive to scattering parameters for the range of parameters typically found in tissue. This is important for developing rapid, noninvasive, inexpensive, and accurate methods for measuring absorption changes in tissue.
Atmospheric-pressure electric discharge as an instrument of chemical activation of water solutions
NASA Astrophysics Data System (ADS)
Rybkin, V. V.; Shutov, D. A.
2017-11-01
Results of experimental studies and numerical simulations of physicochemical characteristics of plasmas generated in different types of atmospheric-pressure discharges (pulsed streamer corona, gliding electric arc, dielectric barrier discharge, glow-discharge electrolysis, diaphragmatic discharge, and dc glow discharge) used to initiate various chemical processes in water solutions are analyzed. Typical reactor designs are considered. Data on the power supply characteristics, plasma electron parameters, gas temperatures, and densities of active particles in different types of discharges excited in different gases and their dependences on the external parameters of discharges are presented. The chemical composition of active particles formed in water is described. Possible mechanisms of production and loss of plasma particles are discussed.
NASA Astrophysics Data System (ADS)
Bouaziz, Nadia; Ben Manaa, Marwa; Ben Lamine, Abdelmottaleb
2017-11-01
The hydrogen absorption-desorption isotherms on LaNi3.8Al1.2-xMnx alloy at temperature T = 433 K is studied through various theoretical models. The analytical expressions of these models were deduced exploiting the grand canonical ensemble in statistical physics by taking some simplifying hypotheses. Among these models an adequate model which presents a good correlation with the experimental curves has been selected. The physicochemical parameters intervening in the absorption-desorption processes and involved in the model expressions could be directly deduced from the experimental isotherms by numerical simulation. Six parameters of the model are adjusted, namely the numbers of hydrogen atoms per site n1 and n2, the receptor site densities N1m and N2m, and the energetic parameters P1 and P2. The behaviors of these parameters are discussed in relation with absorption and desorption processes to better understand and compare these phenomena. Thanks to the energetic parameters, we calculated the sorption energies which are typically ranged between 266 and 269.4 KJ/mol for absorption process and between 267 and 269.5 KJ/mol for desorption process comparable to usual chemical bond energies. Using the adopted model expression, the thermodynamic potential functions which govern the absorption/desorption process such as internal energy Eint, free enthalpy of Gibbs G and entropy Sa are derived.
Mathematical Modeling Approaches in Plant Metabolomics.
Fürtauer, Lisa; Weiszmann, Jakob; Weckwerth, Wolfram; Nägele, Thomas
2018-01-01
The experimental analysis of a plant metabolome typically results in a comprehensive and multidimensional data set. To interpret metabolomics data in the context of biochemical regulation and environmental fluctuation, various approaches of mathematical modeling have been developed and have proven useful. In this chapter, a general introduction to mathematical modeling is presented and discussed in context of plant metabolism. A particular focus is laid on the suitability of mathematical approaches to functionally integrate plant metabolomics data in a metabolic network and combine it with other biochemical or physiological parameters.
Multiscale Modeling of Stiffness, Friction and Adhesion in Mechanical Contacts
2012-02-29
over a lateral length l scales as a power law: h lH, where H is called the Hurst exponent . For typical experimental surfaces, H ranges from 0.5 to 0.8...surfaces with a wide range of Hurst exponents using fully atomistic calculations and the Green’s function method. A simple relation like Eq. (2...described above to explore a full range of parameter space with different rms roughness h0, rms slope h’0, Hurst exponent H, adhesion energy
An Experimental Study of the Plasma Focus Device as a Charged Particle Accelerator
1988-11-01
The dense plasma focus has been investigated at many laboratories as a possible fusion device. Typical plasma parameters for this device are electron...temperatures of 1 keV, densities of 10 to the 19th power per cc, and confinement times of 100 ns. Characteristic of the plasma focus discharge are...neutrons. The emphasis of this work is to investigate the electron and ion emission from the plasma focus and the development of appropriate diagnostics to
Emborsky, Christopher P; Cox, Kenneth R; Chapman, Walter G
2011-08-28
The ubiquitous use of surfactants in commercial and industrial applications has led to many experimental, theoretical, and simulation based studies. These efforts seek to provide a molecular level understanding of the effects on structuring behavior and the corresponding impacts on observable properties (e.g., interfacial tension). With such physical detail, targeted system design can be improved over typical techniques of observational trends and phenomenological correlations by taking advantage of predictive system response. This research provides a systematic study of part of the broad parameter space effects on equilibrium microstructure and interfacial properties of amphiphiles at a liquid-liquid interface using the interfacial statistical associating fluid theory density functional theory as a molecular model for the system from the bulk to the interface. Insights into the molecular level physics and thermodynamics governing the system behavior are discussed as they relate to both predictions qualitatively consistent with experimental observations and extensions beyond currently available studies. © 2011 American Institute of Physics
Parametric and experimental analysis using a power flow approach
NASA Technical Reports Server (NTRS)
Cuschieri, J. M.
1988-01-01
Having defined and developed a structural power flow approach for the analysis of structure-borne transmission of structural vibrations, the technique is used to perform an analysis of the influence of structural parameters on the transmitted energy. As a base for comparison, the parametric analysis is first performed using a Statistical Energy Analysis approach and the results compared with those obtained using the power flow approach. The advantages of using structural power flow are thus demonstrated by comparing the type of results obtained by the two methods. Additionally, to demonstrate the advantages of using the power flow method and to show that the power flow results represent a direct physical parameter that can be measured on a typical structure, an experimental investigation of structural power flow is also presented. Results are presented for an L-shaped beam for which an analytical solution has already been obtained. Furthermore, the various methods available to measure vibrational power flow are compared to investigate the advantages and disadvantages of each method.
Experimental Observation of a Current-Driven Instability in a Neutral Electron-Positron Beam.
Warwick, J; Dzelzainis, T; Dieckmann, M E; Schumaker, W; Doria, D; Romagnani, L; Poder, K; Cole, J M; Alejo, A; Yeung, M; Krushelnick, K; Mangles, S P D; Najmudin, Z; Reville, B; Samarin, G M; Symes, D D; Thomas, A G R; Borghesi, M; Sarri, G
2017-11-03
We report on the first experimental observation of a current-driven instability developing in a quasineutral matter-antimatter beam. Strong magnetic fields (≥1 T) are measured, via means of a proton radiography technique, after the propagation of a neutral electron-positron beam through a background electron-ion plasma. The experimentally determined equipartition parameter of ε_{B}≈10^{-3} is typical of values inferred from models of astrophysical gamma-ray bursts, in which the relativistic flows are also expected to be pair dominated. The data, supported by particle-in-cell simulations and simple analytical estimates, indicate that these magnetic fields persist in the background plasma for thousands of inverse plasma frequencies. The existence of such long-lived magnetic fields can be related to analog astrophysical systems, such as those prevalent in lepton-dominated jets.
Experimental Observation of a Current-Driven Instability in a Neutral Electron-Positron Beam
NASA Astrophysics Data System (ADS)
Warwick, J.; Dzelzainis, T.; Dieckmann, M. E.; Schumaker, W.; Doria, D.; Romagnani, L.; Poder, K.; Cole, J. M.; Alejo, A.; Yeung, M.; Krushelnick, K.; Mangles, S. P. D.; Najmudin, Z.; Reville, B.; Samarin, G. M.; Symes, D. D.; Thomas, A. G. R.; Borghesi, M.; Sarri, G.
2017-11-01
We report on the first experimental observation of a current-driven instability developing in a quasineutral matter-antimatter beam. Strong magnetic fields (≥1 T ) are measured, via means of a proton radiography technique, after the propagation of a neutral electron-positron beam through a background electron-ion plasma. The experimentally determined equipartition parameter of ɛB≈10-3 is typical of values inferred from models of astrophysical gamma-ray bursts, in which the relativistic flows are also expected to be pair dominated. The data, supported by particle-in-cell simulations and simple analytical estimates, indicate that these magnetic fields persist in the background plasma for thousands of inverse plasma frequencies. The existence of such long-lived magnetic fields can be related to analog astrophysical systems, such as those prevalent in lepton-dominated jets.
Feng, Yuan; Lee, Chung-Hao; Sun, Lining; Ji, Songbai; Zhao, Xuefeng
2017-01-01
Characterizing the mechanical properties of white matter is important to understand and model brain development and injury. With embedded aligned axonal fibers, white matter is typically modeled as a transversely isotropic material. However, most studies characterize the white matter tissue using models with a single anisotropic invariant or in a small-strain regime. In this study, we combined a single experimental procedure - asymmetric indentation - with inverse finite element (FE) modeling to estimate the nearly incompressible transversely isotropic material parameters of white matter. A minimal form comprising three parameters was employed to simulate indentation responses in the large-strain regime. The parameters were estimated using a global optimization procedure based on a genetic algorithm (GA). Experimental data from two indentation configurations of porcine white matter, parallel and perpendicular to the axonal fiber direction, were utilized to estimate model parameters. Results in this study confirmed a strong mechanical anisotropy of white matter in large strain. Further, our results suggested that both indentation configurations are needed to estimate the parameters with sufficient accuracy, and that the indenter-sample friction is important. Finally, we also showed that the estimated parameters were consistent with those previously obtained via a trial-and-error forward FE method in the small-strain regime. These findings are useful in modeling and parameterization of white matter, especially under large deformation, and demonstrate the potential of the proposed asymmetric indentation technique to characterize other soft biological tissues with transversely isotropic properties. Copyright © 2016 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Mohamad, B.; Leroux, C.; Reimbold, G.; Ghibaudo, G.
2018-01-01
For advanced gate stacks, effective work function (WFeff) and equivalent oxide thickness (EOT) are fundamental parameters for technology optimization. On FDSOI transistors, and contrary to the bulk technologies, while EOT can still be extracted at strong inversion from the typical gate-to-channel capacitance (Cgc), it is no longer the case for WFeff due to the disappearance of an observable flat band condition on capacitance characteristics. In this work, a new experimental method, the Cbg(VBG) characteristic, is proposed in order to extract the well flat band condition (VFB, W). This characteristic enables an accurate and direct evaluation of WFeff. Moreover, using the previous extraction of the gate oxide (tfox), and buried oxide (tbox) from typical capacitance characteristics (Cgc and Cbc), it allows the extraction of the channel thickness (tch). Furthermore, the measurement of the well flat band condition on Cbg(VBG) characteristics for two different Si and SiGe channel also proves the existence of a dipole at the SiGe/SiO2 interface.
Eisenberg, Marisa C; Jain, Harsh V
2017-10-27
Mathematical modeling has a long history in the field of cancer therapeutics, and there is increasing recognition that it can help uncover the mechanisms that underlie tumor response to treatment. However, making quantitative predictions with such models often requires parameter estimation from data, raising questions of parameter identifiability and estimability. Even in the case of structural (theoretical) identifiability, imperfect data and the resulting practical unidentifiability of model parameters can make it difficult to infer the desired information, and in some cases, to yield biologically correct inferences and predictions. Here, we examine parameter identifiability and estimability using a case study of two compartmental, ordinary differential equation models of cancer treatment with drugs that are cell cycle-specific (taxol) as well as non-specific (oxaliplatin). We proceed through model building, structural identifiability analysis, parameter estimation, practical identifiability analysis and its biological implications, as well as alternative data collection protocols and experimental designs that render the model identifiable. We use the differential algebra/input-output relationship approach for structural identifiability, and primarily the profile likelihood approach for practical identifiability. Despite the models being structurally identifiable, we show that without consideration of practical identifiability, incorrect cell cycle distributions can be inferred, that would result in suboptimal therapeutic choices. We illustrate the usefulness of estimating practically identifiable combinations (in addition to the more typically considered structurally identifiable combinations) in generating biologically meaningful insights. We also use simulated data to evaluate how the practical identifiability of the model would change under alternative experimental designs. These results highlight the importance of understanding the underlying mechanisms rather than purely using parsimony or information criteria/goodness-of-fit to decide model selection questions. The overall roadmap for identifiability testing laid out here can be used to help provide mechanistic insight into complex biological phenomena, reduce experimental costs, and optimize model-driven experimentation. Copyright © 2017. Published by Elsevier Ltd.
Universal Responses of Cyclic-Oxidation Models Studied
NASA Technical Reports Server (NTRS)
Smialek, James L.
2003-01-01
Oxidation is an important degradation process for materials operating in the high-temperature air or oxygen environments typical of jet turbine or rocket engines. Reaction of the combustion gases with the component material forms surface layer scales during these oxidative exposures. Typically, the instantaneous rate of reaction is inversely proportional to the existing scale thickness, giving rise to parabolic kinetics. However, more realistic applications entail periodic startup and shutdown. Some scale spallation may occur upon cooling, resulting in loss of the protective diffusion barrier provided by a fully intact scale. Upon reheating, the component will experience accelerated oxidation due to this spallation. Cyclic-oxidation testing has, therefore, been a mainstay of characterization and performance ranking for high-temperature materials. Models simulate this process by calculating how a scale spalls upon cooling and regrows upon heating (refs. 1 to 3). Recently released NASA software (COSP for Windows) allows researchers to specify a uniform layer or discrete segments of spallation (ref. 4). Families of model curves exhibit consistent regularity and trends with input parameters, and characteristic features have been empirically described in terms of these parameters. Although much insight has been gained from experimental and model curves, no equation has been derived that can describe this behavior explicitly as functions of the key oxidation parameters.
Optimal Wonderful Life Utility Functions in Multi-Agent Systems
NASA Technical Reports Server (NTRS)
Wolpert, David H.; Tumer, Kagan; Swanson, Keith (Technical Monitor)
2000-01-01
The mathematics of Collective Intelligence (COINs) is concerned with the design of multi-agent systems so as to optimize an overall global utility function when those systems lack centralized communication and control. Typically in COINs each agent runs a distinct Reinforcement Learning (RL) algorithm, so that much of the design problem reduces to how best to initialize/update each agent's private utility function, as far as the ensuing value of the global utility is concerned. Traditional team game solutions to this problem assign to each agent the global utility as its private utility function. In previous work we used the COIN framework to derive the alternative Wonderful Life Utility (WLU), and experimentally established that having the agents use it induces global utility performance up to orders of magnitude superior to that induced by use of the team game utility. The WLU has a free parameter (the clamping parameter) which we simply set to zero in that previous work. Here we derive the optimal value of the clamping parameter, and demonstrate experimentally that using that optimal value can result in significantly improved performance over that of clamping to zero, over and above the improvement beyond traditional approaches.
NASA Astrophysics Data System (ADS)
De Masi, G.; Predebon, I.; Spagnolo, S.; Meneses, L.; Delabie, E.; Lupelli, I.; Hillesheim, J. C.; Maggi, C.; Contributors, JET
2018-04-01
Density and magnetic fluctuation measurements in low-β type-III ELM discharges are obtained in the Joint European Torus (JET). They are observed during the inter-ELM pedestal evolution, after the LH transition phase, at about 60-70 kHz. Density fluctuations are measured with a correlation reflectometer system installed on the low-field side and they are localized at the pedestal top. Magnetic fluctuations with a spatial scale k_yρ_i˜ 0.1 are measured through a high resolution coil array. The main features and the relations with local plasma parameters are presented. The nature of these fluctuations is discussed along with linear gyrokinetic simulations. Ion temperature gradient (ITG) modes are the dominant instabilities in the frequency range of interest. In terms of radial localization, typical oscillation frequency and qualitative relation with the possible linear drive, ITG modes are consistent with the experimental density fluctuations measurements. Micro-tearing modes (MTMs), found unstable with a lower growth rate, appear a possible explanation for magnetic fluctuations in terms of typical wavenumbers and direction of propagation.
Energy levels distribution in supersaturated silicon with titanium for photovoltaic applications
DOE Office of Scientific and Technical Information (OSTI.GOV)
Pérez, E., E-mail: eduper@ele.uva.es; Castán, H.; García, H.
2015-01-12
In the attempt to form an intermediate band in the bandgap of silicon substrates to give it the capability to absorb infrared radiation, we studied the deep levels in supersaturated silicon with titanium. The technique used to characterize the energy levels was the thermal admittance spectroscopy. Our experimental results showed that in samples with titanium concentration just under Mott limit there was a relationship among the activation energy value and the capture cross section value. This relationship obeys to the well known Meyer-Neldel rule, which typically appears in processes involving multiple excitations, like carrier capture/emission in deep levels, and itmore » is generally observed in disordered systems. The obtained characteristic Meyer-Neldel parameters were Tmn = 176 K and kTmn = 15 meV. The energy value could be associated to the typical energy of the phonons in the substrate. The almost perfect adjust of all experimental data to the same straight line provides further evidence of the validity of the Meyer Neldel rule, and may contribute to obtain a deeper insight on the ultimate meaning of this phenomenon.« less
Kuznetsova, T A; Makarenkova, I D; Koneva, E L; Aminina, N M; Yakush, E V
2015-01-01
The article represents the results of studying the effect of a new fermented product (FP) containing the probiotic strain Bifidobacterium bifidum 791 and Biogel from brown algae Laminariajaponica on the composition of intestinal microflora and parameters of innate immunity in mice with experimental dysbacteriosis, induced by administration of gentamicin in dose of 25 mg per kg body weight during 7 days. The experimental animals received for 6 weeks in addition to the diet FP, which was 2% of the average volume of feed intake. The FP influence was manifested by more rapid reduction of dyspepsia symptoms, restoration of body weight and balance the intestinal microbiocenosis (increasing of bifido- and lactobacteria, typical E. coli, reducing of the bacteria genus Proteus and Clostridium, elimination of S. aureus). As the results of FP administration we observed the statistically significant reduction of endogenous intoxication values and increasing of the phagocyte activity of neutrophils, related to effector cells of innate immunity, compared with animals not receiving FP. Identified effects of FP are due to both its probiotic properties through the presence of bifidobacteria and immunomodulating and enteral sorbtion activities of alginate component.
Stiffness analysis of glued connection of the timber-concrete structure
NASA Astrophysics Data System (ADS)
Daňková, Jana; Mec, Pavel; Majstríková, Tereza
2016-01-01
This paper presents results of experimental and mathematical analysis of stiffness characteristics of a composite timber-concrete structure. The composite timberconcrete structure presented herein is non-typical compared to similar types of building structures. The interaction between the timber and concrete part of the composite cross-section is not based on metal connecting elements, but it is ensured by a glued-in perforated mesh made of plywood. The paper presents results of experimental and mathematical analysis for material alternatives of the solution of the glued joint. The slip modulus values were determined experimentally. Data obtained from the experiment evaluated by means of regression analysis. Test results were also used as input data for the compilation of a 3D model of a composite structure by means of the 3D finite element model. On the basis of result evaluation, it can be stated that the stress-deformation behaviour at shear loading of this specific timber-concrete composite structure can be affected by the type of glue used. Parameters of the 3D model of both alternative of the structure represent well the behaviour of the composite structure and the model can be used for predicting design parameters of a building structure.
NASA Technical Reports Server (NTRS)
Wohlrab, R.
1983-01-01
Instabilities in turbine operation can be caused by forces which are produced in connection with motions involving the oil film in the bearings. An experimental investigation regarding the characteristics of such forces in the case of three typical steam turbine stages is conducted, taking into account the effect of various parameters. Supplementary kinetic tests are carried out to obtain an estimate of the flow forces which are proportional to the velocity. The measurements are based on the theoretical study of the damping characteristics of a vibrational model. A computational analysis of the effect of the measured fluid forces on the stability characteristics of simple rotor model is also conducted.
NASA Technical Reports Server (NTRS)
Roskam, J.; Grosveld, F.
1980-01-01
Effect of panel curvature and oblique angle of sound incidence on noise reduction characteristics of an aluminum panel are experimentally investigated. Panel curvature results show significant increase in stiffness with comparable decrease of sound transmission through the panel in the frequency region below the panel/cavity resonance frequency. Noise reduction data have been achieved for aluminum panels with clamped, bonded and riveted edge conditions. These edge conditions are shown to influence noise reduction characteristics of aluminum panels. Experimentally measured noise reduction characteristics of flat aluminum panels with uniaxial and biaxial in-plane stresses are presented and discussed. Results indicate important improvement in noise reduction of these panels in the frequency range below the fundamental panel/cavity resonance frequency.
Parameter Estimation and Model Selection in Computational Biology
Lillacci, Gabriele; Khammash, Mustafa
2010-01-01
A central challenge in computational modeling of biological systems is the determination of the model parameters. Typically, only a fraction of the parameters (such as kinetic rate constants) are experimentally measured, while the rest are often fitted. The fitting process is usually based on experimental time course measurements of observables, which are used to assign parameter values that minimize some measure of the error between these measurements and the corresponding model prediction. The measurements, which can come from immunoblotting assays, fluorescent markers, etc., tend to be very noisy and taken at a limited number of time points. In this work we present a new approach to the problem of parameter selection of biological models. We show how one can use a dynamic recursive estimator, known as extended Kalman filter, to arrive at estimates of the model parameters. The proposed method follows. First, we use a variation of the Kalman filter that is particularly well suited to biological applications to obtain a first guess for the unknown parameters. Secondly, we employ an a posteriori identifiability test to check the reliability of the estimates. Finally, we solve an optimization problem to refine the first guess in case it should not be accurate enough. The final estimates are guaranteed to be statistically consistent with the measurements. Furthermore, we show how the same tools can be used to discriminate among alternate models of the same biological process. We demonstrate these ideas by applying our methods to two examples, namely a model of the heat shock response in E. coli, and a model of a synthetic gene regulation system. The methods presented are quite general and may be applied to a wide class of biological systems where noisy measurements are used for parameter estimation or model selection. PMID:20221262
Ionic polymer-metal composite torsional sensor: physics-based modeling and experimental validation
NASA Astrophysics Data System (ADS)
Aidi Sharif, Montassar; Lei, Hong; Khalid Al-Rubaiai, Mohammed; Tan, Xiaobo
2018-07-01
Ionic polymer-metal composites (IPMCs) have intrinsic sensing and actuation properties. Typical IPMC sensors are in the shape of beams and only respond to stimuli acting along beam-bending directions. Rod or tube-shaped IPMCs have been explored as omnidirectional bending actuators or sensors. In this paper, physics-based modeling is studied for a tubular IPMC sensor under pure torsional stimulus. The Poisson–Nernst–Planck model is used to describe the fundamental physics within the IPMC, where it is hypothesized that the anion concentration is coupled to the sum of shear strains induced by the torsional stimulus. Finite element simulation is conducted to solve for the torsional sensing response, where some of the key parameters are identified based on experimental measurements using an artificial neural network. Additional experimental results suggest that the proposed model is able to capture the torsional sensing dynamics for different amplitudes and rates of the torsional stimulus.
Experimental Observation of a Current-Driven Instability in a Neutral Electron-Positron Beam
DOE Office of Scientific and Technical Information (OSTI.GOV)
Warwick, J.; Dzelzainis, T.; Dieckmann, M. E.
Here, we report on the first experimental observation of a current-driven instability developing in a quasineutral matter-antimatter beam. Strong magnetic fields (≥ 1T) are measured, via means of a proton radiography technique, after the propagation of a neutral electron-positron beam through a background electron-ion plasma. The experimentally determined equipartition parameter of ε B ≈ 10 -3 is typical of values inferred from models of astrophysical gamma-ray bursts, in which the relativistic flows are also expected to be pair dominated. The data, supported by particle-in-cell simulations and simple analytical estimates, indicate that these magnetic fields persist in the background plasma formore » thousands of inverse plasma frequencies. The existence of such long-lived magnetic fields can be related to analog astrophysical systems, such as those prevalent in lepton-dominated jets.« less
Experimental Observation of a Current-Driven Instability in a Neutral Electron-Positron Beam
Warwick, J.; Dzelzainis, T.; Dieckmann, M. E.; ...
2017-11-03
Here, we report on the first experimental observation of a current-driven instability developing in a quasineutral matter-antimatter beam. Strong magnetic fields (≥ 1T) are measured, via means of a proton radiography technique, after the propagation of a neutral electron-positron beam through a background electron-ion plasma. The experimentally determined equipartition parameter of ε B ≈ 10 -3 is typical of values inferred from models of astrophysical gamma-ray bursts, in which the relativistic flows are also expected to be pair dominated. The data, supported by particle-in-cell simulations and simple analytical estimates, indicate that these magnetic fields persist in the background plasma formore » thousands of inverse plasma frequencies. The existence of such long-lived magnetic fields can be related to analog astrophysical systems, such as those prevalent in lepton-dominated jets.« less
Thomann, J M; Gasser, P; Bres, E F; Voegel, J C; Gramain, P
1990-02-01
An ion-selective electrode and microcomputer-based experimental setup for the study of ionic-exchange kinetics between a powdered solid and the solution is described. The equipment is composed of easily available commercial devices and a data acquisition and regularization computer program is presented. The system, especially developed to investigate the ionic adsorption, equilibrium attainment and dissolution of hard mineralized tissues, provides good reliable results by taking into account the volume changes of the reacting solution and the electrode behaviour under different experimental conditions, and by avoiding carbonation of the solution. A second computer program, using the regularized data and the experimental parameters, calculates the quantities of protons consumed and calcium released in the case of equilibrium attainment and dissolution of apatite-like compounds. Finally, typical examples of ion-exchange and dissolution kinetics under constant pH of enamel and synthetic hydroxyapatite are examined.
Estimating the uncertainty in thermochemical calculations for oxygen-hydrogen combustors
NASA Astrophysics Data System (ADS)
Sims, Joseph David
The thermochemistry program CEA2 was combined with the statistical thermodynamics program PAC99 in a Monte Carlo simulation to determine the uncertainty in several CEA2 output variables due to uncertainty in thermodynamic reference values for the reactant and combustion species. In all, six typical performance parameters were examined, along with the required intermediate calculations (five gas properties and eight stoichiometric coefficients), for three hydrogen-oxygen combustors: a main combustor, an oxidizer preburner and a fuel preburner. The three combustors were analyzed in two different modes: design mode, where, for the first time, the uncertainty in thermodynamic reference values---taken from the literature---was considered (inputs to CEA2 were specified and so had no uncertainty); and data reduction mode, where inputs to CEA2 did have uncertainty. The inputs to CEA2 were contrived experimental measurements that were intended to represent the typical combustor testing facility. In design mode, uncertainties in the performance parameters were on the order of 0.1% for the main combustor, on the order of 0.05% for the oxidizer preburner and on the order of 0.01% for the fuel preburner. Thermodynamic reference values for H2O were the dominant sources of uncertainty, as was the assigned enthalpy for liquid oxygen. In data reduction mode, uncertainties in performance parameters increased significantly as a result of the uncertainties in experimental measurements compared to uncertainties in thermodynamic reference values. Main combustor and fuel preburner theoretical performance values had uncertainties of about 0.5%, while the oxidizer preburner had nearly 2%. Associated experimentally-determined performance values for all three combustors were 3% to 4%. The dominant sources of uncertainty in this mode were the propellant flowrates. These results only apply to hydrogen-oxygen combustors and should not be generalized to every propellant combination. Species for a hydrogen-oxygen system are relatively simple, thereby resulting in low thermodynamic reference value uncertainties. Hydrocarbon combustors, solid rocket motors and hybrid rocket motors have combustion gases containing complex molecules that will likely have thermodynamic reference values with large uncertainties. Thus, every chemical system should be analyzed in a similar manner as that shown in this work.
Price, W D; Williams, E R
1997-11-20
Unimolecular rate constants for blackbody infrared radiative dissociation (BIRD) were calculated for the model protonated peptide (AlaGly)(n) (n = 2-32) using a variety of dissociation parameters. Combinations of dissociation threshold energies ranging from 0.8 to 1.7 eV and transition entropies corresponding to Arrhenius preexponential factors ranging from very "tight" (A(infinity) = 10(9.9) s(-1)) to "loose" (A(infinity) = 10(16.8) s(-1)) were selected to represent dissociation parameters within the experimental temperature range (300-520 K) and kinetic window (k(uni) = 0.001-0.20 s(-1)) typically used in the BIRD experiment. Arrhenius parameters were determined from the temperature dependence of these values and compared to those in the rapid energy exchange (REX) limit. In this limit, the internal energy of a population of ions is given by a Boltzmann distribution, and kinetics are the same as those in the traditional high-pressure limit. For a dissociation process to be in this limit, the rate of photon exchange between an ion and the vacuum chamber walls must be significantly greater than the dissociation rate. Kinetics rapidly approach the REX limit either as the molecular size or threshold dissociation energy increases or as the transition-state entropy or experimental temperature decreases. Under typical experimental conditions, peptide ions larger than 1.6 kDa should be in the REX limit. Smaller ions may also be in the REX limit depending on the value of the threshold dissociation energy and transition-state entropy. Either modeling or information about the dissociation mechanism must be known in order to confirm REX limit kinetics for these smaller ions. Three principal factors that lead to the size dependence of REX limit kinetics are identified. With increasing molecular size, rates of radiative absorption and emission increase, internal energy distributions become relatively narrower, and the microcanonical dissociation rate constants increase more slowly over the energy distribution of ions. Guidelines established here should make BIRD an even more reliable method to obtain information about dissociation energetics and mechanisms for intermediate size molecules.
Price, William D.
2005-01-01
Unimolecular rate constants for blackbody infrared radiative dissociation (BIRD) were calculated for the model protonated peptide (AlaGly)n (n = 2–32) using a variety of dissociation parameters. Combinations of dissociation threshold energies ranging from 0.8 to 1.7 eV and transition entropies corresponding to Arrhenius preexponential factors ranging from very “tight” (A∞ = 109.9 s−1) to “loose” (A∞ = 1016.8 s−1) were selected to represent dissociation parameters within the experimental temperature range (300–520 K) and kinetic window (kuni = 0.001–0.20 s−1) typically used in the BIRD experiment. Arrhenius parameters were determined from the temperature dependence of these values and compared to those in the rapid energy exchange (REX) limit. In this limit, the internal energy of a population of ions is given by a Boltzmann distribution, and kinetics are the same as those in the traditional high-pressure limit. For a dissociation process to be in this limit, the rate of photon exchange between an ion and the vacuum chamber walls must be significantly greater than the dissociation rate. Kinetics rapidly approach the REX limit either as the molecular size or threshold dissociation energy increases or as the transition-state entropy or experimental temperature decreases. Under typical experimental conditions, peptide ions larger than 1.6 kDa should be in the REX limit. Smaller ions may also be in the REX limit depending on the value of the threshold dissociation energy and transition-state entropy. Either modeling or information about the dissociation mechanism must be known in order to confirm REX limit kinetics for these smaller ions. Three principal factors that lead to the size dependence of REX limit kinetics are identified. With increasing molecular size, rates of radiative absorption and emission increase, internal energy distributions become relatively narrower, and the microcanonical dissociation rate constants increase more slowly over the energy distribution of ions. Guidelines established here should make BIRD an even more reliable method to obtain information about dissociation energetics and mechanisms for intermediate size molecules. PMID:16604162
Dynamic alignment, tolerances, and metrology fundamentals at the nano and micro scales
NASA Astrophysics Data System (ADS)
Silberman, Donn M.
2015-09-01
Although the terms "micropositioning" and "nanopositioning" refer to different classes of positioning systems, "nanopositioning" is often used mistakenly to describe micropositioning systems. Micropositioning systems are typically motor-driven stages with travel ranges of a few millimeters up to a few hundred millimeters. Because the guiding systems in such stages — usually bearings of some kind — generate frictional forces, their resolution and repeatability are typically limited to 0.1 μm. The guiding system working principle also adds errors that are typically in the micrometer range. Nanopositioning systems are typically based on frictionless drives and guiding systems such as piezo actuators and flexures. These systems can achieve resolutions and guiding accuracies down to the sub-nanometer level. Both of these classes of precision positioning and motion systems are used extensively in precision optical and photonic systems to achieve desired performance specifications of instruments and experimental research projects. Currently, many precision positioning and motion systems have been design and implemented to cross over from the micro to the nano ranges with excellent results. This paper will describe some of the fundamental performance parameters and tolerances typical of these systems, some of the metrology used to confirm specifications and a few high end applications of general interest.
Chakarov, Vihren; Hummel, Sibylla; Losch, Florian; Schulte-Mönting, Jürgen; Kristeva, Rumyana
2006-01-01
Background The present study was aimed at investigating the writing parameters of writer's cramp patients and control subjects during handwriting of a test sentence in the absence of visual control. Methods Eight right-handed patients with writer's cramp and eight healthy volunteers as age-matched control subjects participated in the study. The experimental task consisted in writing a test sentence repeatedly for fifty times on a pressure-sensitive digital board. The subject did not have visual control on his handwriting. The writing performance was stored on a PC and analyzed off-line. Results During handwriting all patients developed a typical dystonic limb posture and reported an increase in muscular tension along the experimental session. The patients were significantly slower than the controls, with lower mean vertical pressure of the pen tip on the paper and they could not reach the endmost letter of the sentence in the given time window. No other handwriting parameter differences were found between the two groups. Conclusion Our findings indicate that during writing in the absence of visual feedback writer's cramp patients are slower and could not reach the endmost letter of the test sentence, but their level of automatization is not impaired and writer's cramp handwriting parameters are similar to those of the controls except for even lower vertical pressure of the pen tip on the paper, which is probably due to a changed strategy in such experimental conditions. PMID:16594993
NASA Technical Reports Server (NTRS)
Amer, Tahani; Tripp, John; Tcheng, Ping; Burkett, Cecil; Sealey, Bradley
2004-01-01
This paper presents the calibration results and uncertainty analysis of a high-precision reference pressure measurement system currently used in wind tunnels at the NASA Langley Research Center (LaRC). Sensors, calibration standards, and measurement instruments are subject to errors due to aging, drift with time, environment effects, transportation, the mathematical model, the calibration experimental design, and other factors. Errors occur at every link in the chain of measurements and data reduction from the sensor to the final computed results. At each link of the chain, bias and precision uncertainties must be separately estimated for facility use, and are combined to produce overall calibration and prediction confidence intervals for the instrument, typically at a 95% confidence level. The uncertainty analysis and calibration experimental designs used herein, based on techniques developed at LaRC, employ replicated experimental designs for efficiency, separate estimation of bias and precision uncertainties, and detection of significant parameter drift with time. Final results, including calibration confidence intervals and prediction intervals given as functions of the applied inputs, not as a fixed percentage of the full-scale value are presented. System uncertainties are propagated beginning with the initial reference pressure standard, to the calibrated instrument as a working standard in the facility. Among the several parameters that can affect the overall results are operating temperature, atmospheric pressure, humidity, and facility vibration. Effects of factors such as initial zeroing and temperature are investigated. The effects of the identified parameters on system performance and accuracy are discussed.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Li, F.; Nie, Z.; Wu, Y. P.
We report the transverse phase space diagnostics for electron beams generated through ionization injection in a laser-plasma accelerator. Single-shot measurements of both ultimate emittance and Twiss parameters are achieved by means of permanent magnetic quadrupole. Beams with emittance of μm rad level are obtained in a typical ionization injection scheme, and the dependence on nitrogen concentration and charge density is studied experimentally and confirmed by simulations. A key feature of the transverse phase space, matched beams with Twiss parameter α T ≃ 0, is identified according to the measurement. Lastly, numerical simulations that are in qualitative agreement with the experimentalmore » results reveal that a sufficient phase mixing induced by an overlong injection length leads to the matched phase space distribution.« less
NASA Technical Reports Server (NTRS)
Murphree, J. S.
1980-01-01
A representative set of data from ISIS 2 covering a range of operating modes and geophysical conditions is presented. The data show the typical values and range of ionospheric and magnetospheric characteristics, as viewed from 1400 km with the ISIS 2 instruments. The definition of each data set depends partly on geophysical parameters and partly on satellite operating mode. Preceding the data set is a description of the organizational parameters and a review of the objectives and general characteristics of the data set. The data are shown as a selection from 12 different data formats. Each data has a different selection of formats, but uniformity of a given format selection is preserved throughout each data set.
The thermo-optical behavior of turbid composite laminates under highly energetic laser irradiations
NASA Astrophysics Data System (ADS)
Allheily, Vadim; Merlat, Lionel; Lacroix, Fabrice; Eichhorn, Alfred; L'Hostis, Gildas
2017-01-01
From their prior emergence in the military domain but also nowadays in the civilian area, unmanned air vehicles constitute a growing threat to the todays civilization. In this respect, novel laser weapons are considered to eradicate this menace and the vulnerability of typical aeronautic materials under 1.07μm-wavelength irradiations is also investigated. In this paper, Kubelka-Munk optical parameters of laminated glass fiber-reinforced plastic composites are first assessed to build up a basic analytical interaction model involving internal refraction and reflection as well as the scattering effect due to the presence of glass fibers. Moreover, a thermo-gravimetric analysis is carried out and the kinetic parameters of the decomposition reaction extracted from this test with the Friedman method are verified trough a comparison with experimental measurements.
NASA Astrophysics Data System (ADS)
Belov, A. V.; Kurkov, Andrei S.; Musatov, A. G.; Semenov, V. A.
1990-12-01
Experimental and theoretical investigations were made of the influence of external thermal effects on the dispersive characteristics of single-mode fiber waveguides with different shapes and parameters of the refractive index profile. The temperature coefficients of the group delay were determined. The temperature dependences of the dispersion coefficient (dD/dT = 1.6 × 10-3 and 4.3 × 10-3 ps.nm-1 km-1 K-1, respectively) and of the zero-dispersion wavelength (dλ0/dT = 1.9 × 10-2 and 8.5 × 10-2 nm/K, respectively) were determined at two working wavelengths of 1.3 and 1.55 μm for single-mode fiber waveguides with typical parameters.
Li, F.; Nie, Z.; Wu, Y. P.; ...
2018-02-22
We report the transverse phase space diagnostics for electron beams generated through ionization injection in a laser-plasma accelerator. Single-shot measurements of both ultimate emittance and Twiss parameters are achieved by means of permanent magnetic quadrupole. Beams with emittance of μm rad level are obtained in a typical ionization injection scheme, and the dependence on nitrogen concentration and charge density is studied experimentally and confirmed by simulations. A key feature of the transverse phase space, matched beams with Twiss parameter α T ≃ 0, is identified according to the measurement. Lastly, numerical simulations that are in qualitative agreement with the experimentalmore » results reveal that a sufficient phase mixing induced by an overlong injection length leads to the matched phase space distribution.« less
General rigid motion correction for computed tomography imaging based on locally linear embedding
NASA Astrophysics Data System (ADS)
Chen, Mianyi; He, Peng; Feng, Peng; Liu, Baodong; Yang, Qingsong; Wei, Biao; Wang, Ge
2018-02-01
The patient motion can damage the quality of computed tomography images, which are typically acquired in cone-beam geometry. The rigid patient motion is characterized by six geometric parameters and are more challenging to correct than in fan-beam geometry. We extend our previous rigid patient motion correction method based on the principle of locally linear embedding (LLE) from fan-beam to cone-beam geometry and accelerate the computational procedure with the graphics processing unit (GPU)-based all scale tomographic reconstruction Antwerp toolbox. The major merit of our method is that we need neither fiducial markers nor motion-tracking devices. The numerical and experimental studies show that the LLE-based patient motion correction is capable of calibrating the six parameters of the patient motion simultaneously, reducing patient motion artifacts significantly.
Atmospheric particulate analysis using angular light scattering
NASA Technical Reports Server (NTRS)
Hansen, M. Z.
1980-01-01
Using the light scattering matrix elements measured by a polar nephelometer, a procedure for estimating the characteristics of atmospheric particulates was developed. A theoretical library data set of scattering matrices derived from Mie theory was tabulated for a range of values of the size parameter and refractive index typical of atmospheric particles. Integration over the size parameter yielded the scattering matrix elements for a variety of hypothesized particulate size distributions. A least squares curve fitting technique was used to find a best fit from the library data for the experimental measurements. This was used as a first guess for a nonlinear iterative inversion of the size distributions. A real index of 1.50 and an imaginary index of -0.005 are representative of the smoothed inversion results for the near ground level atmospheric aerosol in Tucson.
KEWPIE2: A cascade code for the study of dynamical decay of excited nuclei
NASA Astrophysics Data System (ADS)
Lü, Hongliang; Marchix, Anthony; Abe, Yasuhisa; Boilley, David
2016-03-01
KEWPIE-a cascade code devoted to investigating the dynamical decay of excited nuclei, specially designed for treating very low probability events related to the synthesis of super-heavy nuclei formed in fusion-evaporation reactions-has been improved and rewritten in C++ programming language to become KEWPIE2. The current version of the code comprises various nuclear models concerning the light-particle emission, fission process and statistical properties of excited nuclei. General features of the code, such as the numerical scheme and the main physical ingredients, are described in detail. Some typical calculations having been performed in the present paper clearly show that theoretical predictions are generally in accordance with experimental data. Furthermore, since the values of some input parameters cannot be determined neither theoretically nor experimentally, a sensibility analysis is presented. To this end, we systematically investigate the effects of using different parameter values and reaction models on the final results. As expected, in the case of heavy nuclei, the fission process has the most crucial role to play in theoretical predictions. This work would be essential for numerical modeling of fusion-evaporation reactions.
Uncertainty Analysis of Instrument Calibration and Application
NASA Technical Reports Server (NTRS)
Tripp, John S.; Tcheng, Ping
1999-01-01
Experimental aerodynamic researchers require estimated precision and bias uncertainties of measured physical quantities, typically at 95 percent confidence levels. Uncertainties of final computed aerodynamic parameters are obtained by propagation of individual measurement uncertainties through the defining functional expressions. In this paper, rigorous mathematical techniques are extended to determine precision and bias uncertainties of any instrument-sensor system. Through this analysis, instrument uncertainties determined through calibration are now expressed as functions of the corresponding measurement for linear and nonlinear univariate and multivariate processes. Treatment of correlated measurement precision error is developed. During laboratory calibration, calibration standard uncertainties are assumed to be an order of magnitude less than those of the instrument being calibrated. Often calibration standards do not satisfy this assumption. This paper applies rigorous statistical methods for inclusion of calibration standard uncertainty and covariance due to the order of their application. The effects of mathematical modeling error on calibration bias uncertainty are quantified. The effects of experimental design on uncertainty are analyzed. The importance of replication is emphasized, techniques for estimation of both bias and precision uncertainties using replication are developed. Statistical tests for stationarity of calibration parameters over time are obtained.
A review of model applications for structured soils: b) Pesticide transport.
Köhne, John Maximilian; Köhne, Sigrid; Simůnek, Jirka
2009-02-16
The past decade has seen considerable progress in the development of models simulating pesticide transport in structured soils subject to preferential flow (PF). Most PF pesticide transport models are based on the two-region concept and usually assume one (vertical) dimensional flow and transport. Stochastic parameter sets are sometimes used to account for the effects of spatial variability at the field scale. In the past decade, PF pesticide models were also coupled with Geographical Information Systems (GIS) and groundwater flow models for application at the catchment and larger regional scales. A review of PF pesticide model applications reveals that the principal difficulty of their application is still the appropriate parameterization of PF and pesticide processes. Experimental solution strategies involve improving measurement techniques and experimental designs. Model strategies aim at enhancing process descriptions, studying parameter sensitivity, uncertainty, inverse parameter identification, model calibration, and effects of spatial variability, as well as generating model emulators and databases. Model comparison studies demonstrated that, after calibration, PF pesticide models clearly outperform chromatographic models for structured soils. Considering nonlinear and kinetic sorption reactions further enhanced the pesticide transport description. However, inverse techniques combined with typically available experimental data are often limited in their ability to simultaneously identify parameters for describing PF, sorption, degradation and other processes. On the other hand, the predictive capacity of uncalibrated PF pesticide models currently allows at best an approximate (order-of-magnitude) estimation of concentrations. Moreover, models should target the entire soil-plant-atmosphere system, including often neglected above-ground processes such as pesticide volatilization, interception, sorption to plant residues, root uptake, and losses by runoff. The conclusions compile progress, problems, and future research choices for modelling pesticide displacement in structured soils.
Experimental Results of Site Calibration and Sensitivity Measurements in OTR for UWB Systems
NASA Astrophysics Data System (ADS)
Viswanadham, Chandana; Rao, P. Mallikrajuna
2017-06-01
System calibration and parameter accuracy measurement of electronic support measures (ESM) systems is a major activity, carried out by electronic warfare (EW) engineers. These activities are very critical and needs good understanding in the field of microwaves, antennas, wave propagation, digital and communication domains. EW systems are broad band, built with state-of-the art electronic hardware, installed on different varieties of military platforms to guard country's security from time to time. EW systems operate in wide frequency ranges, typically in the order of thousands of MHz, hence these are ultra wide band (UWB) systems. Few calibration activities are carried within the system and in the test sites, to meet the accuracies of final specifications. After calibration, parameters are measured for their accuracies either in feed mode by injecting the RF signals into the front end or in radiation mode by transmitting the RF signals on to system antenna. To carry out these activities in radiation mode, a calibrated open test range (OTR) is necessary in the frequency band of interest. Thus site calibration of OTR is necessary to be carried out before taking up system calibration and parameter measurements. This paper presents the experimental results of OTR site calibration and sensitivity measurements of UWB systems in radiation mode.
NASA Astrophysics Data System (ADS)
Zhou, Daming; Al-Durra, Ahmed; Gao, Fei; Ravey, Alexandre; Matraji, Imad; Godoy Simões, Marcelo
2017-10-01
Energy management strategy plays a key role for Fuel Cell Hybrid Electric Vehicles (FCHEVs), it directly affects the efficiency and performance of energy storages in FCHEVs. For example, by using a suitable energy distribution controller, the fuel cell system can be maintained in a high efficiency region and thus saving hydrogen consumption. In this paper, an energy management strategy for online driving cycles is proposed based on a combination of the parameters from three offline optimized fuzzy logic controllers using data fusion approach. The fuzzy logic controllers are respectively optimized for three typical driving scenarios: highway, suburban and city in offline. To classify patterns of online driving cycles, a Probabilistic Support Vector Machine (PSVM) is used to provide probabilistic classification results. Based on the classification results of the online driving cycle, the parameters of each offline optimized fuzzy logic controllers are then fused using Dempster-Shafer (DS) evidence theory, in order to calculate the final parameters for the online fuzzy logic controller. Three experimental validations using Hardware-In-the-Loop (HIL) platform with different-sized FCHEVs have been performed. Experimental comparison results show that, the proposed PSVM-DS based online controller can achieve a relatively stable operation and a higher efficiency of fuel cell system in real driving cycles.
Jefferson Lab Experimental Hall C
NASA Astrophysics Data System (ADS)
Carlini, Roger D.
1996-10-01
Jefferson Lab's Hall C went into initial operation in November 1995. The hall has a short orbit spectrometer (SOS) for short-lived particles such as pions and kaons and a high-momentum spectrometer (HMS) usually used for electrons. The SOS can also be used for protons. The HMS can range to 7 GeV/c. Both the SOS and HMS have typical resolutions of (10-3). Experiments for this hall range from measuring the neutron electric form factor, to color transparency, to creating strange nuclei. This paper will present the optical capabilities of the spectrometers, the parameters of the detection systems, and the overall beam line characteristics of the hall as determined from the results from the recent physics experiments along with the upcoming experimental schedule. Additional information is available at URL http://www.cebaf.gov/hallc.html.
Han, Songshan; Jiao, Zongxia; Yao, Jianyong; Shang, Yaoxing
2014-09-01
An electro-hydraulic load simulator (EHLS) is a typical case of torque systems with strong external disturbances from hydraulic motion systems. A new velocity synchronizing compensation strategy is proposed in this paper to eliminate motion disturbances, based on theoretical and experimental analysis of a structure invariance method and traditional velocity synchronizing compensation controller (TVSM). This strategy only uses the servo-valve's control signal of motion system and torque feedback of torque system, which could avoid the requirement on the velocity and acceleration signal in the structure invariance method, and effectively achieve a more accurate velocity synchronizing compensation in large loading conditions than a TVSM. In order to facilitate the implementation of this strategy in engineering cases, the selection rules for compensation parameters are proposed. It does not rely on any accurate information of structure parameters. This paper presents the comparison data of an EHLS with various typical operating conditions using three controllers, i.e., closed loop proportional integral derivative (PID) controller, TVSM, and the proposed improved velocity synchronizing controller. Experiments are conducted to confirm that the new strategy performs well against motion disturbances. It is more effective to improve the tracking accuracy and is a more appropriate choice for engineering applications.
Shape optimization techniques for musical instrument design
NASA Astrophysics Data System (ADS)
Henrique, Luis; Antunes, Jose; Carvalho, Joao S.
2002-11-01
The design of musical instruments is still mostly based on empirical knowledge and costly experimentation. One interesting improvement is the shape optimization of resonating components, given a number of constraints (allowed parameter ranges, shape smoothness, etc.), so that vibrations occur at specified modal frequencies. Each admissible geometrical configuration generates an error between computed eigenfrequencies and the target set. Typically, error surfaces present many local minima, corresponding to suboptimal designs. This difficulty can be overcome using global optimization techniques, such as simulated annealing. However these methods are greedy, concerning the number of function evaluations required. Thus, the computational effort can be unacceptable if complex problems, such as bell optimization, are tackled. Those issues are addressed in this paper, and a method for improving optimization procedures is proposed. Instead of using the local geometric parameters as searched variables, the system geometry is modeled in terms of truncated series of orthogonal space-funcitons, and optimization is performed on their amplitude coefficients. Fourier series and orthogonal polynomials are typical such functions. This technique reduces considerably the number of searched variables, and has a potential for significant computational savings in complex problems. It is illustrated by optimizing the shapes of both current and uncommon marimba bars.
NASA Astrophysics Data System (ADS)
Andalib, T.; Martin, J. W.; Bidinosti, C. P.; Mammei, R. R.; Jamieson, B.; Lang, M.; Kikawa, T.
2017-09-01
Future experiments seeking to measure the neutron electric dipole moment (nEDM) require stable and homogeneous magnetic fields. Normally these experiments use a coil internal to a passively magnetically shielded volume to generate the magnetic field. The stability of the magnetic field generated by the coil within the magnetically shielded volume may be influenced by a number of factors. The factor studied here is the dependence of the internally generated field on the magnetic permeability μ of the shield material. We provide measurements of the temperature-dependence of the permeability of the material used in a set of prototype magnetic shields, using experimental parameters nearer to those of nEDM experiments than previously reported in the literature. Our measurements imply a range of 1/μ dμ/dT from 0-2.7%/K. Assuming typical nEDM experiment coil and shield parameters gives μ/B0 dB0/dμ = 0.01, resulting in a temperature dependence of the magnetic field in a typical nEDM experiment of dB0/dT = 0 - 270 pT/K for B0 = 1 μT. The results are useful for estimating the necessary level of temperature control in nEDM experiments.
Comparing a discrete and continuum model of the intestinal crypt
Murray, Philip J.; Walter, Alex; Fletcher, Alex G.; Edwards, Carina M.; Tindall, Marcus J.; Maini, Philip K.
2011-01-01
The integration of processes at different scales is a key problem in the modelling of cell populations. Owing to increased computational resources and the accumulation of data at the cellular and subcellular scales, the use of discrete, cell-level models, which are typically solved using numerical simulations, has become prominent. One of the merits of this approach is that important biological factors, such as cell heterogeneity and noise, can be easily incorporated. However, it can be difficult to efficiently draw generalisations from the simulation results, as, often, many simulation runs are required to investigate model behaviour in typically large parameter spaces. In some cases, discrete cell-level models can be coarse-grained, yielding continuum models whose analysis can lead to the development of insight into the underlying simulations. In this paper we apply such an approach to the case of a discrete model of cell dynamics in the intestinal crypt. An analysis of the resulting continuum model demonstrates that there is a limited region of parameter space within which steady-state (and hence biologically realistic) solutions exist. Continuum model predictions show good agreement with corresponding results from the underlying simulations and experimental data taken from murine intestinal crypts. PMID:21411869
General solutions for the oxidation kinetics of polymers
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gillen, K.T.; Clough, R.L.; Wise, J.
1996-08-01
The simplest general kinetic schemes applicable to the oxidation of polymers are presented, discussed and analyzed in terms of the underlying kinetic assumptions. For the classic basic autoxidation scheme (BAS), which involves three bimolecular termination steps and is applicable mainly to unstabilized polymers, typical assumptions used singly or in groups include (1) long kinetic chain length, (2) a specific ratio of the termination rate constants and (3) insensitivity to the oxygen concentration (e.g., domination by a single termination step). Steady-state solutions for the rate of oxidation are given in terms of one, two, three, or four parameters, corresponding respectively tomore » three, two, one, or zero kinetic assumptions. The recently derived four-parameter solution predicts conditions yielding unusual dependencies of the oxidation rate on oxygen concentration and on initiation rate, as well as conditions leading to some unusual diffusion-limited oxidation profile shapes. For stabilized polymers, unimolecular termination schemes are typically more appropriate than bimolecular. Kinetics incorporating unimolecular termination reactions are shown to result in very simple oxidation expressions which have been experimentally verified for both radiation-initiated oxidation of an EPDM and thermoxidative degradation of nitrile and chloroprene elastomers.« less
Wei, Fanan; Yang, Haitao; Liu, Lianqing; Li, Guangyong
2017-03-01
Dynamic mechanical behaviour of living cells has been described by viscoelasticity. However, quantitation of the viscoelastic parameters for living cells is far from sophisticated. In this paper, combining inverse finite element (FE) simulation with Atomic Force Microscope characterization, we attempt to develop a new method to evaluate and acquire trustworthy viscoelastic index of living cells. First, influence of the experiment parameters on stress relaxation process is assessed using FE simulation. As suggested by the simulations, cell height has negligible impact on shape of the force-time curve, i.e. the characteristic relaxation time; and the effect originates from substrate can be totally eliminated when stiff substrate (Young's modulus larger than 3 GPa) is used. Then, so as to develop an effective optimization strategy for the inverse FE simulation, the parameters sensitivity evaluation is performed for Young's modulus, Poisson's ratio, and characteristic relaxation time. With the experiment data obtained through typical stress relaxation measurement, viscoelastic parameters are extracted through the inverse FE simulation by comparing the simulation results and experimental measurements. Finally, reliability of the acquired mechanical parameters is verified with different load experiments performed on the same cell.
Study on Adaptive Parameter Determination of Cluster Analysis in Urban Management Cases
NASA Astrophysics Data System (ADS)
Fu, J. Y.; Jing, C. F.; Du, M. Y.; Fu, Y. L.; Dai, P. P.
2017-09-01
The fine management for cities is the important way to realize the smart city. The data mining which uses spatial clustering analysis for urban management cases can be used in the evaluation of urban public facilities deployment, and support the policy decisions, and also provides technical support for the fine management of the city. Aiming at the problem that DBSCAN algorithm which is based on the density-clustering can not realize parameter adaptive determination, this paper proposed the optimizing method of parameter adaptive determination based on the spatial analysis. Firstly, making analysis of the function Ripley's K for the data set to realize adaptive determination of global parameter MinPts, which means setting the maximum aggregation scale as the range of data clustering. Calculating every point object's highest frequency K value in the range of Eps which uses K-D tree and setting it as the value of clustering density to realize the adaptive determination of global parameter MinPts. Then, the R language was used to optimize the above process to accomplish the precise clustering of typical urban management cases. The experimental results based on the typical case of urban management in XiCheng district of Beijing shows that: The new DBSCAN clustering algorithm this paper presents takes full account of the data's spatial and statistical characteristic which has obvious clustering feature, and has a better applicability and high quality. The results of the study are not only helpful for the formulation of urban management policies and the allocation of urban management supervisors in XiCheng District of Beijing, but also to other cities and related fields.
Can a clinical placement influence stigma? An analysis of measures of social distance.
Moxham, Lorna; Taylor, Ellie; Patterson, Christopher; Perlman, Dana; Brighton, Renee; Sumskis, Susan; Keough, Emily; Heffernan, Tim
2016-09-01
The way people who experience mental illness are perceived by health care professionals, which often includes stigmatising attitudes, can have a significant impact on treatment outcomes and on their quality of life. To determine whether stigma towards people with mental illness varied for undergraduate nursing students who attended a non-traditional clinical placement called Recovery Camp compared to students who attended a 'typical' mental health clinical placement. Quasi-experimental. Seventy-nine third-year nursing students were surveyed; n=40 attended Recovery Camp (intervention), n=39 (comparison group) attended a 'typical' mental health clinical placement. All students completed the Social Distance Scale (SDS) pre- and post-placement and at three-month follow-up. Data analysis consisted of a one-way repeated measures analysis of variance (ANOVA) exploring parameter estimates between group scores across three time points. Two secondary repeated measures ANOVAs were performed to demonstrate the differences in SDS scores for each group across time. Pairwise comparisons demonstrated the differences between time intervals. A statistically significant difference in ratings of stigma between the intervention group and the comparison group existed. Parameter estimates revealed that stigma ratings for the intervention group were significantly reduced post-placement and remained consistently low at three-month follow-up. There was no significant difference in ratings of stigma for the comparison group over time. Students who attended Recovery Camp reported significant decreases in stigma towards people with a mental illness over time, compared to the typical placement group. Findings suggest that a therapeutic recreation based clinical placement was more successful in reducing stigma regarding mental illness in undergraduate nursing students compared to those who attended typical mental health clinical placements. Copyright © 2016 Elsevier Ltd. All rights reserved.
Predicting network modules of cell cycle regulators using relative protein abundance statistics.
Oguz, Cihan; Watson, Layne T; Baumann, William T; Tyson, John J
2017-02-28
Parameter estimation in systems biology is typically done by enforcing experimental observations through an objective function as the parameter space of a model is explored by numerical simulations. Past studies have shown that one usually finds a set of "feasible" parameter vectors that fit the available experimental data equally well, and that these alternative vectors can make different predictions under novel experimental conditions. In this study, we characterize the feasible region of a complex model of the budding yeast cell cycle under a large set of discrete experimental constraints in order to test whether the statistical features of relative protein abundance predictions are influenced by the topology of the cell cycle regulatory network. Using differential evolution, we generate an ensemble of feasible parameter vectors that reproduce the phenotypes (viable or inviable) of wild-type yeast cells and 110 mutant strains. We use this ensemble to predict the phenotypes of 129 mutant strains for which experimental data is not available. We identify 86 novel mutants that are predicted to be viable and then rank the cell cycle proteins in terms of their contributions to cumulative variability of relative protein abundance predictions. Proteins involved in "regulation of cell size" and "regulation of G1/S transition" contribute most to predictive variability, whereas proteins involved in "positive regulation of transcription involved in exit from mitosis," "mitotic spindle assembly checkpoint" and "negative regulation of cyclin-dependent protein kinase by cyclin degradation" contribute the least. These results suggest that the statistics of these predictions may be generating patterns specific to individual network modules (START, S/G2/M, and EXIT). To test this hypothesis, we develop random forest models for predicting the network modules of cell cycle regulators using relative abundance statistics as model inputs. Predictive performance is assessed by the areas under receiver operating characteristics curves (AUC). Our models generate an AUC range of 0.83-0.87 as opposed to randomized models with AUC values around 0.50. By using differential evolution and random forest modeling, we show that the model prediction statistics generate distinct network module-specific patterns within the cell cycle network.
Probabilistic treatment of the uncertainty from the finite size of weighted Monte Carlo data
NASA Astrophysics Data System (ADS)
Glüsenkamp, Thorsten
2018-06-01
Parameter estimation in HEP experiments often involves Monte Carlo simulation to model the experimental response function. A typical application are forward-folding likelihood analyses with re-weighting, or time-consuming minimization schemes with a new simulation set for each parameter value. Problematically, the finite size of such Monte Carlo samples carries intrinsic uncertainty that can lead to a substantial bias in parameter estimation if it is neglected and the sample size is small. We introduce a probabilistic treatment of this problem by replacing the usual likelihood functions with novel generalized probability distributions that incorporate the finite statistics via suitable marginalization. These new PDFs are analytic, and can be used to replace the Poisson, multinomial, and sample-based unbinned likelihoods, which covers many use cases in high-energy physics. In the limit of infinite statistics, they reduce to the respective standard probability distributions. In the general case of arbitrary Monte Carlo weights, the expressions involve the fourth Lauricella function FD, for which we find a new finite-sum representation in a certain parameter setting. The result also represents an exact form for Carlson's Dirichlet average Rn with n > 0, and thereby an efficient way to calculate the probability generating function of the Dirichlet-multinomial distribution, the extended divided difference of a monomial, or arbitrary moments of univariate B-splines. We demonstrate the bias reduction of our approach with a typical toy Monte Carlo problem, estimating the normalization of a peak in a falling energy spectrum, and compare the results with previously published methods from the literature.
Urzay, Javier; Llewellyn Smith, Stefan G; Thompson, Elinor; Glover, Beverley J
2009-08-21
Plant reproduction depends on pollen dispersal. For anemophilous (wind-pollinated) species, such as grasses and many trees, shedding pollen from the anther must be accomplished by physical mechanisms. The unknown nature of this process has led to its description as the 'paradox of pollen liberation'. A simple scaling analysis, supported by experimental measurements on typical wind-pollinated plant species, is used to estimate the suitability of previous resolutions of this paradox based on wind-gust aerodynamic models of fungal-spore liberation. According to this scaling analysis, the steady Stokes drag force is found to be large enough to liberate anemophilous pollen grains, and unsteady boundary-layer forces produced by wind gusts are found to be mostly ineffective since the ratio of the characteristic viscous time scale to the inertial time scale of acceleration of the wind stream is a small parameter for typical anemophilous species. A hypothetical model of a stochastic aeroelastic mechanism, initiated by the atmospheric turbulence typical of the micrometeorological conditions in the vicinity of the plant, is proposed to contribute to wind pollination.
NASA Astrophysics Data System (ADS)
Ortiz, J. P.; Ortega, A. D.; Harp, D. R.; Boukhalfa, H.; Stauffer, P. H.
2017-12-01
Gas transport in unsaturated fractured media plays an important role in a variety of applications, including detection of underground nuclear explosions, transport from volatile contaminant plumes, shallow CO2 leakage from carbon sequestration sites, and methane leaks from hydraulic fracturing operations. Gas breakthrough times are highly sensitive to uncertainties associated with a variety of hydrogeologic parameters, including: rock type, fracture aperture, matrix permeability, porosity, and saturation. Furthermore, a couple simplifying assumptions are typically employed when representing fracture flow and transport. Aqueous phase transport is typically considered insignificant compared to gas phase transport in unsaturated fracture flow regimes, and an assumption of instantaneous dissolution/volatilization of radionuclide gas is commonly used to reduce computational expense. We conduct this research using a twofold approach that combines laboratory gas experimentation and numerical modeling to verify and refine these simplifying assumptions in our current models of gas transport. Using a gas diffusion cell, we are able to measure air pressure transmission through fractured tuff core samples while also measuring Xe gas breakthrough measured using a mass spectrometer. We can thus create synthetic barometric fluctuations akin to those observed in field tests and measure the associated gas flow through the fracture and matrix pore space for varying degrees of fluid saturation. We then attempt to reproduce the experimental results using numerical models in PLFOTRAN and FEHM codes to better understand the importance of different parameters and assumptions on gas transport. Our numerical approaches represent both single-phase gas flow with immobile water, as well as full multi-phase transport in order to test the validity of assuming immobile pore water. Our approaches also include the ability to simulate the reaction equilibrium kinetics of dissolution/volatilization in order to identify when the assumption of instantaneous equilibrium is reasonable. These efforts will aid us in our application of such models to larger, field-scale tests and improve our ability to predict gas breakthrough times.
NASA Astrophysics Data System (ADS)
Kovalevsky, Louis; Langley, Robin S.; Caro, Stephane
2016-05-01
Due to the high cost of experimental EMI measurements significant attention has been focused on numerical simulation. Classical methods such as Method of Moment or Finite Difference Time Domain are not well suited for this type of problem, as they require a fine discretisation of space and failed to take into account uncertainties. In this paper, the authors show that the Statistical Energy Analysis is well suited for this type of application. The SEA is a statistical approach employed to solve high frequency problems of electromagnetically reverberant cavities at a reduced computational cost. The key aspects of this approach are (i) to consider an ensemble of system that share the same gross parameter, and (ii) to avoid solving Maxwell's equations inside the cavity, using the power balance principle. The output is an estimate of the field magnitude distribution in each cavity. The method is applied on a typical aircraft structure.
Disorder Problem In Diluted Magnetic Semiconductors
NASA Astrophysics Data System (ADS)
Nelson, Ryky; Ekuma, Chinedu; Terletska, Hanna; Sudhindra, Vidhyadhiraja; Moreno, Juana; Jarrell, Mark
2015-03-01
Motivated by experimental studies addressing the role of impurity disorder in diluted magnetic semiconductors (DMS), we investigate the effects of disorder using a simple tight-binding Hamiltonian with random impurity potential and spin-fermion exchange which is self-consistently solved using the typical medium theory. Adopting the typical density of states (TDoS) as the order parameter, we find that the TDoS vanishes below a critical concentration of the impurity, which indicates an Anderson localization transition in the system. Our results qualitatively explain why at concentrations lower than a critical value DMS are insulating and paramagnetic, while at larger concentrations are ferromagnetic. We also compare several simple models to explore the interplay between ferromagnetic order and disorder induced insulating behavior, and the role of the spin-orbit interaction on this competition. We apply our findings to (Ga,Mn)As and (Ga,Mn)N to compare and contrast their phase diagrams.
Primary and secondary creep in aluminum alloys as a solid state transformation
NASA Astrophysics Data System (ADS)
Fernández, R.; Bruno, G.; González-Doncel, G.
2016-08-01
Despite the massive literature and the efforts devoted to understand the creep behavior of aluminum alloys, a full description of this phenomenon on the basis of microstructural parameters and experimental conditions is, at present, still missing. The analysis of creep is typically carried out in terms of the so-called steady or secondary creep regime. The present work offers an alternative view of the creep behavior based on the Orowan dislocation dynamics. Our approach considers primary and secondary creep together as solid state isothermal transformations, similar to recrystallization or precipitation phenomena. In this frame, it is shown that the Johnson-Mehl-Avrami-Kolmogorov equation, typically used to analyze these transformations, can also be employed to explain creep deformation. The description is fully compatible with present (empirical) models of steady state creep. We used creep curves of commercially pure Al and ingot AA6061 alloy at different temperatures and stresses to validate the proposed model.
Kaur, Jaspreet; Nygren, Anders; Vigmond, Edward J
2014-01-01
Fitting parameter sets of non-linear equations in cardiac single cell ionic models to reproduce experimental behavior is a time consuming process. The standard procedure is to adjust maximum channel conductances in ionic models to reproduce action potentials (APs) recorded in isolated cells. However, vastly different sets of parameters can produce similar APs. Furthermore, even with an excellent AP match in case of single cell, tissue behaviour may be very different. We hypothesize that this uncertainty can be reduced by additionally fitting membrane resistance (Rm). To investigate the importance of Rm, we developed a genetic algorithm approach which incorporated Rm data calculated at a few points in the cycle, in addition to AP morphology. Performance was compared to a genetic algorithm using only AP morphology data. The optimal parameter sets and goodness of fit as computed by the different methods were compared. First, we fit an ionic model to itself, starting from a random parameter set. Next, we fit the AP of one ionic model to that of another. Finally, we fit an ionic model to experimentally recorded rabbit action potentials. Adding the extra objective (Rm, at a few voltages) to the AP fit, lead to much better convergence. Typically, a smaller MSE (mean square error, defined as the average of the squared error between the target AP and AP that is to be fitted) was achieved in one fifth of the number of generations compared to using only AP data. Importantly, the variability in fit parameters was also greatly reduced, with many parameters showing an order of magnitude decrease in variability. Adding Rm to the objective function improves the robustness of fitting, better preserving tissue level behavior, and should be incorporated.
Electron anions and the glass transition temperature.
Johnson, Lewis E; Sushko, Peter V; Tomota, Yudai; Hosono, Hideo
2016-09-06
Properties of glasses are typically controlled by judicious selection of the glass-forming and glass-modifying constituents. Through an experimental and computational study of the crystalline, molten, and amorphous [Ca12Al14O32](2+) ⋅ (e(-))2, we demonstrate that electron anions in this system behave as glass modifiers that strongly affect solidification dynamics, the glass transition temperature, and spectroscopic properties of the resultant amorphous material. The concentration of such electron anions is a consequential control parameter: It invokes materials evolution pathways and properties not available in conventional glasses, which opens a unique avenue in rational materials design.
A new method of radio frequency links by coplanar coils for implantable medical devices.
Xue, L; Hao, H W; Li, L; Ma, B Z
2005-01-01
A new method based on coplanar coils for the design of radio frequency links has been developed, to realize the communication between the programming wand and the implantable medical devices with shielding container simply and reliably. With the analysis of electronic and magnetic field theory, the communication model has been established and simulated, and the circuit has been designed and tested. The experimental results are consistent with the simulation fairly well. The voltage transfer ratio of the typical circuit with present parameters can reach as high as 0.02, which can fulfill the requirements of communication.
DOE Office of Scientific and Technical Information (OSTI.GOV)
FISCHER,W.; IRISO, U.; MUSTAFIN, E.
We report on molecular desorption of baked stainless steel from irradiation with high energy ions under perpendicular impact. Ion induced molecular desorption has affected the performance of a number of ion accelerators, in which the beam loss typically occurs under small angles. However, experimental parameters can be easier controlled in measurements with perpendicular impact. Desorption coefficients for small angle impact can be estimated from these measurements. The measurements were carried out at Brookhaven's Relativistic Heavy Ion Collider.
Soft tissue modelling with conical springs.
Omar, Nadzeri; Zhong, Yongmin; Jazar, Reza N; Subic, Aleksandar; Smith, Julian; Shirinzadeh, Bijan
2015-01-01
This paper presents a new method for real-time modelling soft tissue deformation. It improves the traditional mass-spring model with conical springs to deal with nonlinear mechanical behaviours of soft tissues. A conical spring model is developed to predict soft tissue deformation with reference to deformation patterns. The model parameters are formulated according to tissue deformation patterns and the nonlinear behaviours of soft tissues are modelled with the stiffness variation of conical spring. Experimental results show that the proposed method can describe different tissue deformation patterns using one single equation and also exhibit the typical mechanical behaviours of soft tissues.
Application of up-sampling and resolution scaling to Fresnel reconstruction of digital holograms.
Williams, Logan A; Nehmetallah, Georges; Aylo, Rola; Banerjee, Partha P
2015-02-20
Fresnel transform implementation methods using numerical preprocessing techniques are investigated in this paper. First, it is shown that up-sampling dramatically reduces the minimum reconstruction distance requirements and allows maximal signal recovery by eliminating aliasing artifacts which typically occur at distances much less than the Rayleigh range of the object. Second, zero-padding is employed to arbitrarily scale numerical resolution for the purpose of resolution matching multiple holograms, where each hologram is recorded using dissimilar geometric or illumination parameters. Such preprocessing yields numerical resolution scaling at any distance. Both techniques are extensively illustrated using experimental results.
Applications of DC-Self Bias in CCP Deposition Systems
NASA Astrophysics Data System (ADS)
Keil, D. L.; Augustyniak, E.; Sakiyama, Y.
2013-09-01
In many commercial CCP plasma process systems the DC-self bias is available as a reported process parameter. Since commercial systems typically limit the number of onboard diagnostics, there is great incentive to understand how DC-self bias can be expected to respond to various system perturbations. This work reviews and examines DC self bias changes in response to tool aging, chamber film accumulation and wafer processing. The diagnostic value of the DC self bias response to transient and various steady state current draw schemes are examined. Theoretical models and measured experimental results are compared and contrasted.
Electron anions and the glass transition temperature
Johnson, Lewis E.; Sushko, Peter V.; Tomota, Yudai; ...
2016-08-24
Properties of glasses are typically controlled by judicious selection of the glass-forming and glass-modifying constituents. Through an experimental and computational study of the crystalline, molten, and amorphous [Ca 12Al 14O 32] 2+ ∙ (e –) 2, we demonstrate that electron anions in this system behave as glass-modifiers that strongly affect solidification dynamics, the glass transition temperature, and spectroscopic properties of the resultant amorphous material. Concentration of such electron anions is a consequential control parameter: it invokes materials evolution pathways and properties not available in conventional glasses, which opens a new avenue in rational materials design.
Pierrillas, Philippe B; Tod, Michel; Amiel, Magali; Chenel, Marylore; Henin, Emilie
2016-09-01
The purpose of this study was to explore the impact of censoring due to animal sacrifice on parameter estimates and tumor volume calculated from two diameters in larger tumors during tumor growth experiments in preclinical studies. The type of measurement error that can be expected was also investigated. Different scenarios were challenged using the stochastic simulation and estimation process. One thousand datasets were simulated under the design of a typical tumor growth study in xenografted mice, and then, eight approaches were used for parameter estimation with the simulated datasets. The distribution of estimates and simulation-based diagnostics were computed for comparison. The different approaches were robust regarding the choice of residual error and gave equivalent results. However, by not considering missing data induced by sacrificing the animal, parameter estimates were biased and led to false inferences in terms of compound potency; the threshold concentration for tumor eradication when ignoring censoring was 581 ng.ml(-1), but the true value was 240 ng.ml(-1).
Tashkova, Katerina; Korošec, Peter; Silc, Jurij; Todorovski, Ljupčo; Džeroski, Sašo
2011-10-11
We address the task of parameter estimation in models of the dynamics of biological systems based on ordinary differential equations (ODEs) from measured data, where the models are typically non-linear and have many parameters, the measurements are imperfect due to noise, and the studied system can often be only partially observed. A representative task is to estimate the parameters in a model of the dynamics of endocytosis, i.e., endosome maturation, reflected in a cut-out switch transition between the Rab5 and Rab7 domain protein concentrations, from experimental measurements of these concentrations. The general parameter estimation task and the specific instance considered here are challenging optimization problems, calling for the use of advanced meta-heuristic optimization methods, such as evolutionary or swarm-based methods. We apply three global-search meta-heuristic algorithms for numerical optimization, i.e., differential ant-stigmergy algorithm (DASA), particle-swarm optimization (PSO), and differential evolution (DE), as well as a local-search derivative-based algorithm 717 (A717) to the task of estimating parameters in ODEs. We evaluate their performance on the considered representative task along a number of metrics, including the quality of reconstructing the system output and the complete dynamics, as well as the speed of convergence, both on real-experimental data and on artificial pseudo-experimental data with varying amounts of noise. We compare the four optimization methods under a range of observation scenarios, where data of different completeness and accuracy of interpretation are given as input. Overall, the global meta-heuristic methods (DASA, PSO, and DE) clearly and significantly outperform the local derivative-based method (A717). Among the three meta-heuristics, differential evolution (DE) performs best in terms of the objective function, i.e., reconstructing the output, and in terms of convergence. These results hold for both real and artificial data, for all observability scenarios considered, and for all amounts of noise added to the artificial data. In sum, the meta-heuristic methods considered are suitable for estimating the parameters in the ODE model of the dynamics of endocytosis under a range of conditions: With the model and conditions being representative of parameter estimation tasks in ODE models of biochemical systems, our results clearly highlight the promise of bio-inspired meta-heuristic methods for parameter estimation in dynamic system models within system biology.
2011-01-01
Background We address the task of parameter estimation in models of the dynamics of biological systems based on ordinary differential equations (ODEs) from measured data, where the models are typically non-linear and have many parameters, the measurements are imperfect due to noise, and the studied system can often be only partially observed. A representative task is to estimate the parameters in a model of the dynamics of endocytosis, i.e., endosome maturation, reflected in a cut-out switch transition between the Rab5 and Rab7 domain protein concentrations, from experimental measurements of these concentrations. The general parameter estimation task and the specific instance considered here are challenging optimization problems, calling for the use of advanced meta-heuristic optimization methods, such as evolutionary or swarm-based methods. Results We apply three global-search meta-heuristic algorithms for numerical optimization, i.e., differential ant-stigmergy algorithm (DASA), particle-swarm optimization (PSO), and differential evolution (DE), as well as a local-search derivative-based algorithm 717 (A717) to the task of estimating parameters in ODEs. We evaluate their performance on the considered representative task along a number of metrics, including the quality of reconstructing the system output and the complete dynamics, as well as the speed of convergence, both on real-experimental data and on artificial pseudo-experimental data with varying amounts of noise. We compare the four optimization methods under a range of observation scenarios, where data of different completeness and accuracy of interpretation are given as input. Conclusions Overall, the global meta-heuristic methods (DASA, PSO, and DE) clearly and significantly outperform the local derivative-based method (A717). Among the three meta-heuristics, differential evolution (DE) performs best in terms of the objective function, i.e., reconstructing the output, and in terms of convergence. These results hold for both real and artificial data, for all observability scenarios considered, and for all amounts of noise added to the artificial data. In sum, the meta-heuristic methods considered are suitable for estimating the parameters in the ODE model of the dynamics of endocytosis under a range of conditions: With the model and conditions being representative of parameter estimation tasks in ODE models of biochemical systems, our results clearly highlight the promise of bio-inspired meta-heuristic methods for parameter estimation in dynamic system models within system biology. PMID:21989196
Parvin, Sh; Taghiloo, A; Irani, A; Mirbagheri, M Mehdi
2017-07-01
We aimed to study therapeutic effects of antigravity treadmill (AlterG) training on reflex hyper-excitability, muscle stiffness, and corticospinal tract (CST) function in children with spastic hemiplegic cerebral palsy (CP). Three children received AlterG training 3 days per week for 8 weeks as experimental group. Each session lasted 45 minutes. One child as control group received typical occupational therapy for the same amount of time. We evaluated hyper-excitability of lower limb muscles by H-reflex response. We quantified muscle stiffness by sonoelastography images of the affected muscles. We quantified CST activity by transcranial magnetic stimulation (TMS). We performed the evaluations before and after training for both groups. H response latency and maximum M-wave amplitude were improved in experimental group after training compared to control group. Two children of experimental group had TMS response. Major parameters of TMS (i.e. peak-to-peak amplitude of motor evoked potential (MEP), latency of MEP, cortical silent period, and intensity of pulse) improved for both of them. Three parameters of texture analysis of sonoelastography images were improved for experimental group (i.e. contrast, entropy, and shear wave velocity). These findings indicate that AlterG training can improve reflexes, muscle stiffness, and CST activity in children with spastic hemiplegic CP and can be considered as a therapeutic tool to improve neuromuscular abnormalities occurring secondary to CP.
Experimental designs for detecting synergy and antagonism between two drugs in a pre-clinical study.
Sperrin, Matthew; Thygesen, Helene; Su, Ting-Li; Harbron, Chris; Whitehead, Anne
2015-01-01
The identification of synergistic interactions between combinations of drugs is an important area within drug discovery and development. Pre-clinically, large numbers of screening studies to identify synergistic pairs of compounds can often be ran, necessitating efficient and robust experimental designs. We consider experimental designs for detecting interaction between two drugs in a pre-clinical in vitro assay in the presence of uncertainty of the monotherapy response. The monotherapies are assumed to follow the Hill equation with common lower and upper asymptotes, and a common variance. The optimality criterion used is the variance of the interaction parameter. We focus on ray designs and investigate two algorithms for selecting the optimum set of dose combinations. The first is a forward algorithm in which design points are added sequentially. This is found to give useful solutions in simple cases but can lack robustness when knowledge about the monotherapy parameters is insufficient. The second algorithm is a more pragmatic approach where the design points are constrained to be distributed log-normally along the rays and monotherapy doses. We find that the pragmatic algorithm is more stable than the forward algorithm, and even when the forward algorithm has converged, the pragmatic algorithm can still out-perform it. Practically, we find that good designs for detecting an interaction have equal numbers of points on monotherapies and combination therapies, with those points typically placed in positions where a 50% response is expected. More uncertainty in monotherapy parameters leads to an optimal design with design points that are more spread out. Copyright © 2015 John Wiley & Sons, Ltd.
Scene-based nonuniformity correction technique for infrared focal-plane arrays.
Liu, Yong-Jin; Zhu, Hong; Zhao, Yi-Gong
2009-04-20
A scene-based nonuniformity correction algorithm is presented to compensate for the gain and bias nonuniformity in infrared focal-plane array sensors, which can be separated into three parts. First, an interframe-prediction method is used to estimate the true scene, since nonuniformity correction is a typical blind-estimation problem and both scene values and detector parameters are unavailable. Second, the estimated scene, along with its corresponding observed data obtained by detectors, is employed to update the gain and the bias by means of a line-fitting technique. Finally, with these nonuniformity parameters, the compensated output of each detector is obtained by computing a very simple formula. The advantages of the proposed algorithm lie in its low computational complexity and storage requirements and ability to capture temporal drifts in the nonuniformity parameters. The performance of every module is demonstrated with simulated and real infrared image sequences. Experimental results indicate that the proposed algorithm exhibits a superior correction effect.
A DERATING METHOD FOR THERAPEUTIC APPLICATIONS OF HIGH INTENSITY FOCUSED ULTRASOUND
Bessonova, O.V.; Khokhlova, V.A.; Canney, M.S.; Bailey, M.R.; Crum, L.A.
2010-01-01
Current methods of determining high intensity focused ultrasound (HIFU) fields in tissue rely on extrapolation of measurements in water assuming linear wave propagation both in water and in tissue. Neglecting nonlinear propagation effects in the derating process can result in significant errors. In this work, a new method based on scaling the source amplitude is introduced to estimate focal parameters of nonlinear HIFU fields in tissue. Focal values of acoustic field parameters in absorptive tissue are obtained from a numerical solution to a KZK-type equation and are compared to those simulated for propagation in water. Focal waveforms, peak pressures, and intensities are calculated over a wide range of source outputs and linear focusing gains. Our modeling indicates, that for the high gain sources which are typically used in therapeutic medical applications, the focal field parameters derated with our method agree well with numerical simulation in tissue. The feasibility of the derating method is demonstrated experimentally in excised bovine liver tissue. PMID:20582159
A derating method for therapeutic applications of high intensity focused ultrasound
NASA Astrophysics Data System (ADS)
Bessonova, O. V.; Khokhlova, V. A.; Canney, M. S.; Bailey, M. R.; Crum, L. A.
2010-05-01
Current methods of determining high intensity focused ultrasound (HIFU) fields in tissue rely on extrapolation of measurements in water assuming linear wave propagation both in water and in tissue. Neglecting nonlinear propagation effects in the derating process can result in significant errors. A new method based on scaling the source amplitude is introduced to estimate focal parameters of nonlinear HIFU fields in tissue. Focal values of acoustic field parameters in absorptive tissue are obtained from a numerical solution to a KZK-type equation and are compared to those simulated for propagation in water. Focal wave-forms, peak pressures, and intensities are calculated over a wide range of source outputs and linear focusing gains. Our modeling indicates, that for the high gain sources which are typically used in therapeutic medical applications, the focal field parameters derated with our method agree well with numerical simulation in tissue. The feasibility of the derating method is demonstrated experimentally in excised bovine liver tissue.
A DERATING METHOD FOR THERAPEUTIC APPLICATIONS OF HIGH INTENSITY FOCUSED ULTRASOUND.
Bessonova, O V; Khokhlova, V A; Canney, M S; Bailey, M R; Crum, L A
2010-01-01
Current methods of determining high intensity focused ultrasound (HIFU) fields in tissue rely on extrapolation of measurements in water assuming linear wave propagation both in water and in tissue. Neglecting nonlinear propagation effects in the derating process can result in significant errors. In this work, a new method based on scaling the source amplitude is introduced to estimate focal parameters of nonlinear HIFU fields in tissue. Focal values of acoustic field parameters in absorptive tissue are obtained from a numerical solution to a KZK-type equation and are compared to those simulated for propagation in water. Focal waveforms, peak pressures, and intensities are calculated over a wide range of source outputs and linear focusing gains. Our modeling indicates, that for the high gain sources which are typically used in therapeutic medical applications, the focal field parameters derated with our method agree well with numerical simulation in tissue. The feasibility of the derating method is demonstrated experimentally in excised bovine liver tissue.
Relating centrality to impact parameter in nucleus-nucleus collisions
NASA Astrophysics Data System (ADS)
Das, Sruthy Jyothi; Giacalone, Giuliano; Monard, Pierre-Amaury; Ollitrault, Jean-Yves
2018-01-01
In ultrarelativistic heavy-ion experiments, one estimates the centrality of a collision by using a single observable, say n , typically given by the transverse energy or the number of tracks observed in a dedicated detector. The correlation between n and the impact parameter b of the collision is then inferred by fitting a specific model of the collision dynamics, such as the Glauber model, to experimental data. The goal of this paper is to assess precisely which information about b can be extracted from data without any specific model of the collision. Under the sole assumption that the probability distribution of n for a fixed b is Gaussian, we show that the probability distribution of the impact parameter in a narrow centrality bin can be accurately reconstructed up to 5 % centrality. We apply our methodology to data from the Relativistic Heavy Ion Collider and the Large Hadron Collider. We propose a simple measure of the precision of the centrality determination, which can be used to compare different experiments.
Predictive IP controller for robust position control of linear servo system.
Lu, Shaowu; Zhou, Fengxing; Ma, Yajie; Tang, Xiaoqi
2016-07-01
Position control is a typical application of linear servo system. In this paper, to reduce the system overshoot, an integral plus proportional (IP) controller is used in the position control implementation. To further improve the control performance, a gain-tuning IP controller based on a generalized predictive control (GPC) law is proposed. Firstly, to represent the dynamics of the position loop, a second-order linear model is used and its model parameters are estimated on-line by using a recursive least squares method. Secondly, based on the GPC law, an optimal control sequence is obtained by using receding horizon, then directly supplies the IP controller with the corresponding control parameters in the real operations. Finally, simulation and experimental results are presented to show the efficiency of proposed scheme. Copyright © 2016 ISA. Published by Elsevier Ltd. All rights reserved.
Two Universal Equations of State for Solids
NASA Astrophysics Data System (ADS)
Sun, Jiu-Xun; Wu, Qiang; Guo, Yang; Cai, Ling-Cang
2010-01-01
In this paper, two equations of state (EOSs) (Sun Jiu-Xun-Morse with parameters n = 3 and 4, designated by SMS3 and SMS4) with two parameters are proposed to satisfy four merits proposed previously and give improved results for the cohesive energy. By applying ten typical EOSs to fit experimental compression data of 50 materials, it is shown that the SMS4 EOS gives the best results; the Baonza and Morse EOSs give the second best results; the SMS3 and modified generalized Lennard-Jones (mGLJ) EOSs give the third best results. However, the Baonza and mGLJ EOSs cannot give physically reasonable values of cohesive energy and P-V curves in the expansion region; the SMS3 and SMS4 EOS give fairly good results, and have some advantages over the Baonza and mGLJ EOSs in practical applications.
Stable Trapping of Multielectron Helium Bubbles in a Paul Trap
NASA Astrophysics Data System (ADS)
Joseph, E. M.; Vadakkumbatt, V.; Pal, A.; Ghosh, A.
2017-06-01
In a recent experiment, we have used a linear Paul trap to store and study multielectron bubbles (MEBs) in liquid helium. MEBs have a charge-to-mass ratio (between 10^{-4} and 10^{-2} C/kg) which is several orders of magnitude smaller than ions (between 10^6 and 10^8 C/kg) studied in traditional ion traps. In addition, MEBs experience significant drag force while moving through the liquid. As a result, the experimental parameters for stable trapping of MEBs, such as magnitude and frequency of the applied electric fields, are very different from those used in typical ion trap experiments. The purpose of this paper is to model the motion of MEBs inside a linear Paul trap in liquid helium, determine the range of working parameters of the trap, and compare the results with experiments.
Mehand, Massinissa Si; Srinivasan, Bala; De Crescenzo, Gregory
2015-01-01
Surface plasmon resonance-based biosensors have been successfully applied to the study of the interactions between macromolecules and small molecular weight compounds. In an effort to increase the throughput of these SPR-based experiments, we have already proposed to inject multiple compounds simultaneously over the same surface. When specifically applied to small molecular weight compounds, such a strategy would however require prior knowledge of the refractive index increment of each compound in order to correctly interpret the recorded signal. An additional experiment is typically required to obtain this information. In this manuscript, we show that through the introduction of an additional global parameter corresponding to the ratio of the saturating signals associated with each molecule, the kinetic parameters could be identified with similar confidence intervals without any other experimentation. PMID:26515024
NASA Astrophysics Data System (ADS)
Yang, Chun; Quarles, C. A.
2007-10-01
We have used positron Doppler Broadening Spectroscopy (DBS) to investigate the uniformity of rubber-carbon black composite samples. The amount of carbon black added to a rubber sample is characterized by phr, the number of grams of carbon black per hundred grams of rubber. Typical concentrations in rubber tires are 50 phr. It has been shown that the S parameter measured by DBS depends on the phr of the sample, so the variation in carbon black concentration can be easily measured to 0.5 phr. In doing the experiments we observed a dependence of the S parameter on small variation in the counting rate or deadtime. By carefully calibrating this deadtime correction we can significantly reduce the experimental run time and thus make faster determination of the uniformity of extended samples.
Influence of Powder Injection Parameters in High-Pressure Cold Spray
NASA Astrophysics Data System (ADS)
Ozdemir, Ozan C.; Widener, Christian A.
2017-10-01
High-pressure cold spray systems are becoming widely accepted for use in the structural repair of surface defects of expensive machinery parts used in industrial and military equipment. The deposition quality of cold spray repairs is typically validated using coupon testing and through destructive analysis of mock-ups or first articles for a defined set of parameters. In order to provide a reliable repair, it is important to not only maintain the same processing parameters, but also to have optimum fixed parameters, such as the particle injection location. This study is intended to provide insight into the sensitivity of the way that the powder is injected upstream of supersonic nozzles in high-pressure cold spray systems and the effects of variations in injection parameters on the nature of the powder particle kinetics. Experimentally validated three-dimensional computational fluid dynamics (3D CFD) models are implemented to study the particle impact conditions for varying powder feeder tube size, powder feeder tube axial misalignment, and radial powder feeder injection location on the particle velocity and the deposition shape of aluminum alloy 6061. Outputs of the models are statistically analyzed to explore the shape of the spray plume distribution and resulting coating buildup.
Uncertainty relations as Hilbert space geometry
NASA Technical Reports Server (NTRS)
Braunstein, Samuel L.
1994-01-01
Precision measurements involve the accurate determination of parameters through repeated measurements of identically prepared experimental setups. For many parameters there is a 'natural' choice for the quantum observable which is expected to give optimal information; and from this observable one can construct an Heinsenberg uncertainty principle (HUP) bound on the precision attainable for the parameter. However, the classical statistics of multiple sampling directly gives us tools to construct bounds for the precision available for the parameters of interest (even when no obvious natural quantum observable exists, such as for phase, or time); it is found that these direct bounds are more restrictive than those of the HUP. The implication is that the natural quantum observables typically do not encode the optimal information (even for observables such as position, and momentum); we show how this can be understood simply in terms of the Hilbert space geometry. Another striking feature of these bounds to parameter uncertainty is that for a large enough number of repetitions of the measurements all V quantum states are 'minimum uncertainty' states - not just Gaussian wave-packets. Thus, these bounds tell us what precision is achievable as well as merely what is allowed.
Experimental investigation of the structural behavior of equine urethra.
Natali, Arturo Nicola; Carniel, Emanuele Luigi; Frigo, Alessandro; Fontanella, Chiara Giulia; Rubini, Alessandro; Avital, Yochai; De Benedictis, Giulia Maria
2017-04-01
An integrated experimental and computational investigation was developed aiming to provide a methodology for characterizing the structural response of the urethral duct. The investigation provides information that are suitable for the actual comprehension of lower urinary tract mechanical functionality and the optimal design of prosthetic devices. Experimental activity entailed the execution of inflation tests performed on segments of horse penile urethras from both proximal and distal regions. Inflation tests were developed imposing different volumes. Each test was performed according to a two-step procedure. The tubular segment was inflated almost instantaneously during the first step, while volume was held constant for about 300s to allow the development of relaxation processes during the second step. Tests performed on the same specimen were interspersed by 600s of rest to allow the recovery of the specimen mechanical condition. Results from experimental activities were statistically analyzed and processed by means of a specific mechanical model. Such computational model was developed with the purpose of interpreting the general pressure-volume-time response of biologic tubular structures. The model includes parameters that interpret the elastic and viscous behavior of hollow structures, directly correlated with the results from the experimental activities. Post-processing of experimental data provided information about the non-linear elastic and time-dependent behavior of the urethral duct. In detail, statistically representative pressure-volume and pressure relaxation curves were identified, and summarized by structural parameters. Considering elastic properties, initial stiffness ranged between 0.677 ± 0.026kPa and 0.262 ± 0.006kPa moving from proximal to distal region of penile urethra. Viscous parameters showed typical values of soft biological tissues, as τ 1 =0.153±0.018s, τ 2 =17.458 ± 1.644s and τ 1 =0.201 ± 0.085, τ 2 = 8.514 ± 1.379s for proximal and distal regions respectively. A general procedure for the mechanical characterization of the urethral duct has been provided. The proposed methodology allows identifying mechanical parameters that properly express the mechanical behavior of the biological tube. The approach is especially suitable for evaluating the influence of degenerative phenomena on the lower urinary tract mechanical functionality. The information are mandatory for the optimal design of potential surgical procedures and devices. Copyright © 2017 Elsevier B.V. All rights reserved.
Yang, Kaida; Kryutyanskiy, Victor; Kolmychek, Irina; ...
2016-01-01
Magnetic materials where at least one dimension is in the nanometer scale typically exhibit different magnetic, magnetotransport, and magnetooptical properties compared to bulk materials. Composite magnetic thin films where the matrix composition, magnetic cluster size, and overall composite film thickness can be experimentally tailored via adequate processing or growth parameters offer a viable nanoscale platform to investigate possible correlations between nonlinear magnetooptical and magnetotransport properties, since both types of properties are sensitive to the local magnetization landscape. As a result, it has been shown that the local magnetization contrast affects the nonlinear magnetooptical properties as well as the magnetotransport propertiesmore » in magnetic-metal/nonmagnetic metal multilayers; thus, nanocomposite films showcase another path to investigate possible correlations between these distinct properties which may prove useful for sensing applications.« less
Cell Size Regulation in Bacteria
NASA Astrophysics Data System (ADS)
Amir, Ariel
2014-05-01
Various bacteria such as the canonical gram negative Escherichia coli or the well-studied gram positive Bacillus subtilis divide symmetrically after they approximately double their volume. Their size at division is not constant, but is typically distributed over a narrow range. Here, we propose an analytically tractable model for cell size control, and calculate the cell size and interdivision time distributions, as well as the correlations between these variables. We suggest ways of extracting the model parameters from experimental data, and show that existing data for E. coli supports partial size control, and a particular explanation: a cell attempts to add a constant volume from the time of initiation of DNA replication to the next initiation event. This hypothesis accounts for the experimentally observed correlations between mother and daughter cells as well as the exponential dependence of size on growth rate.
Experimental investigation of the dynamics of pellet ablation on the Texas Experimental Tokamak
DOE Office of Scientific and Technical Information (OSTI.GOV)
Durst, R.D.
1988-01-01
Rapid fluctuations in the ablation of hydrogen pellets in the Texas Experimental Tokamak were studied using fast photographic techniques. It is proposed that the fluctuations are a type of relaxation oscillation driven by the motion of the particle across the magnetic field. This is shown to be consistent with a time-dependent model of plasma shielding due to Kaufmann et al. A technique to include this effect in calculations of pellet ablation is discussed. Spatially resolved measurements of the temperature and density in the pellet-ablation cloud were obtained by line-to-continuum ratios and Stark broadening, respectively. Typical parameters in the pellet-ablation cloudmore » are 5-6 eV and 1.0-1.5 {times} 10{sup 17} cm{sup {minus}3}. The flow along the magnetic field is found to be isobaric. The heating of the expanding ablatant is strongly asymmetric, being stronger on the side facing the electron-drift direction. This may be due to suprathermal electrons.« less
Simulation of FRET dyes allows quantitative comparison against experimental data
NASA Astrophysics Data System (ADS)
Reinartz, Ines; Sinner, Claude; Nettels, Daniel; Stucki-Buchli, Brigitte; Stockmar, Florian; Panek, Pawel T.; Jacob, Christoph R.; Nienhaus, Gerd Ulrich; Schuler, Benjamin; Schug, Alexander
2018-03-01
Fully understanding biomolecular function requires detailed insight into the systems' structural dynamics. Powerful experimental techniques such as single molecule Förster Resonance Energy Transfer (FRET) provide access to such dynamic information yet have to be carefully interpreted. Molecular simulations can complement these experiments but typically face limits in accessing slow time scales and large or unstructured systems. Here, we introduce a coarse-grained simulation technique that tackles these challenges. While requiring only few parameters, we maintain full protein flexibility and include all heavy atoms of proteins, linkers, and dyes. We are able to sufficiently reduce computational demands to simulate large or heterogeneous structural dynamics and ensembles on slow time scales found in, e.g., protein folding. The simulations allow for calculating FRET efficiencies which quantitatively agree with experimentally determined values. By providing atomically resolved trajectories, this work supports the planning and microscopic interpretation of experiments. Overall, these results highlight how simulations and experiments can complement each other leading to new insights into biomolecular dynamics and function.
Kinetic modeling of kraft delignification of Eucalyptus globulus
DOE Office of Scientific and Technical Information (OSTI.GOV)
Santos, A.; Rodriguez, F.; Gilarranz, M.A.
1997-10-01
A kinetic model for the kraft pulping delignification of Eucalyptus globulus is proposed. This model is discriminated among some kinetic expressions often used in the literature, and the kinetic parameters are determined by fitting of experimental results. A total of 25 isothermal experiments at liquor-to-wood ratios of 50 and 5 L/kg have been carried out. Initial, bulk, and residual delignification stages have been observed during the lignin removal, the transitions being, referring to the lignin initial content, about 82 and 3%. Carbohydrate removal and effective alkali-metal and hydrosulfide consumption have been related with the lignin removal by means of effectivemore » stoichiometric coefficients for each stage, coefficients also being calculated by fitting of the experimental data. The kinetic model chosen has been used to simulate typical kraft pulping experiments carried out at nonisothermal conditions, using a temperature ramp. The model yields simulated values close to those obtained experimentally for the wood studied and also ably reproduces the trends of the literature data.« less
Damping of short gravity-capillary waves due to oil derivatives film on the water surface
NASA Astrophysics Data System (ADS)
Sergievskaya, Irina; Ermakov, Stanislav; Lazareva, Tatyana
2016-10-01
In this paper new results of laboratory studies of damping of gravity-capillary waves on the water surface covered by kerosene are presented and compared with our previous analysis of characteristics of crude oil and diesel fuel films. Investigations of kerosene films were carried out in a wide range values of film thicknesses (from some hundreds millimetres to a few millimetres) and in a wide range of surface wave frequencies (from 10 to 27 Hz). The selected frequency range corresponds to the operating wavelengths of microwave, X- to Ka-band radars typically used for the ocean remote sensing. The studied range of film thickness covers typical thicknesses of routine spills in the ocean. It is obtained that characteristics of waves, measured in the presence of oil derivatives films differ from those for crude oil films, in particular, because the volume viscosity of oil derivatives and crude oil is strongly different. To retrieve parameters of kerosene films from the experimental data the surface wave damping was analyzed theoretically in the frame of a model of two-layer fluid. The films are assumed to be soluble, so the elasticity on the upper and lower boundaries is considered as a function of wave frequency. Physical parameters of oil derivative films were estimated when tuning the film parameters to fit theory and experiment. Comparison between wave damping due to crude oil, kerosene and diesel fuel films have shown some capabilities of distinguishing of oil films from remote sensing of short surface waves.
Wohrer, Adrien; Machens, Christian K.
2015-01-01
All of our perceptual experiences arise from the activity of neural populations. Here we study the formation of such percepts under the assumption that they emerge from a linear readout, i.e., a weighted sum of the neurons’ firing rates. We show that this assumption constrains the trial-to-trial covariance structure of neural activities and animal behavior. The predicted covariance structure depends on the readout parameters, and in particular on the temporal integration window w and typical number of neurons K used in the formation of the percept. Using these predictions, we show how to infer the readout parameters from joint measurements of a subject’s behavior and neural activities. We consider three such scenarios: (1) recordings from the complete neural population, (2) recordings of neuronal sub-ensembles whose size exceeds K, and (3) recordings of neuronal sub-ensembles that are smaller than K. Using theoretical arguments and artificially generated data, we show that the first two scenarios allow us to recover the typical spatial and temporal scales of the readout. In the third scenario, we show that the readout parameters can only be recovered by making additional assumptions about the structure of the full population activity. Our work provides the first thorough interpretation of (feed-forward) percept formation from a population of sensory neurons. We discuss applications to experimental recordings in classic sensory decision-making tasks, which will hopefully provide new insights into the nature of perceptual integration. PMID:25793393
NASA Astrophysics Data System (ADS)
Kraus, Michal; Juhásová Šenitková, Ingrid
2017-10-01
Building environmental audit and the assessment of indoor air quality (IAQ) in typical residential buildings is necessary process to ensure users’ health and well-being. The paper deals with the concentrations on indoor dust particles (PM10) in the context of hygrothermal microclimate in indoor environment. The indoor temperature, relative humidity and air movement are basic significant factors determining the PM10 concentration [μg/m3]. The experimental measurements in this contribution represent the impact of indoor physical parameters on the concentration of particulate matter mass concentration. The occurrence of dust particles is typical for the almost two-thirds of interiors of the buildings. Other parameters indoor environment, such as air change rate, volume of the room, roughness and porosity of the building material surfaces, static electricity, light ions and others, were set constant and they are not taken into account in this study. The mass concentration of PM10 is measured during summer season in apartment of residential prefabricated building. The values of global temperature [°C] and relative humidity of indoor air [%] are also monitored. The quantity of particulate mass matter is determined gravimetrically by weighing according to CSN EN 12 341 (2014). The obtained results show that the temperature difference of the internal environment does not have a significant effect on the concentration PM10. Vice versa, the difference of relative humidity exhibits a difference of the concentration of dust particles. Higher levels of indoor particulates are observed for low values of relative humidity. The decreasing of relative air humidity about 10% caused 10µg/m3 of PM10 concentration increasing. The hygienic limit value of PM10 concentration is not exceeded at any point of experimental measurement.
Experimental design and efficient parameter estimation in preclinical pharmacokinetic studies.
Ette, E I; Howie, C A; Kelman, A W; Whiting, B
1995-05-01
Monte Carlo simulation technique used to evaluate the effect of the arrangement of concentrations on the efficiency of estimation of population pharmacokinetic parameters in the preclinical setting is described. Although the simulations were restricted to the one compartment model with intravenous bolus input, they provide the basis of discussing some structural aspects involved in designing a destructive ("quantic") preclinical population pharmacokinetic study with a fixed sample size as is usually the case in such studies. The efficiency of parameter estimation obtained with sampling strategies based on the three and four time point designs were evaluated in terms of the percent prediction error, design number, individual and joint confidence intervals coverage for parameter estimates approaches, and correlation analysis. The data sets contained random terms for both inter- and residual intra-animal variability. The results showed that the typical population parameter estimates for clearance and volume were efficiently (accurately and precisely) estimated for both designs, while interanimal variability (the only random effect parameter that could be estimated) was inefficiently (inaccurately and imprecisely) estimated with most sampling schedules of the two designs. The exact location of the third and fourth time point for the three and four time point designs, respectively, was not critical to the efficiency of overall estimation of all population parameters of the model. However, some individual population pharmacokinetic parameters were sensitive to the location of these times.
Blanco, Sofía T; Rivas, Clara; Bravo, Ramón; Fernández, Javier; Artal, Manuela; Velasco, Inmaculada
2014-09-16
This paper discusses the influence of the noncondensable impurities CO and CH4 on Carbon Capture and Storage (CCS) technology. We calculated and drew conclusions about the impact of both impurities in the CO2 on selected transport, injection, and storage parameters (pipeline pressure drop, storage capacity, etc.), whose analysis is necessary for the safe construction and operation of CO2 pipelines and for the secure long-term geological storage of anthropogenic CO2. To calculate these parameters, it is necessary to acquire data on the volumetric properties and the vapor-liquid equilibrium of the fluid being subjected to CCS. In addition to literature data, we used new experimental data, which are presented here and were obtained for five mixtures of CO2+CO with compositions characteristic of the typical emissions of the E.U. and the U.S.A. Temperatures and pressures are based on relevant CO2 pipeline and geological storage site values. From our experimental results, Peng-Robinson, PC-SAFT, and GERG Equations of State for were validated CO2+CO under the conditions of CCS. We conclude that the concentration of both impurities strongly affects the studied parameters, with CO being the most influential and problematic. The overall result of these negative effects is an increase in the difficulties, risks, and overall costs of CCS.
NASA Astrophysics Data System (ADS)
Polster, Lisa; Schuemann, Jan; Rinaldi, Ilaria; Burigo, Lucas; McNamara, Aimee L.; Stewart, Robert D.; Attili, Andrea; Carlson, David J.; Sato, Tatsuhiko; Ramos Méndez, José; Faddegon, Bruce; Perl, Joseph; Paganetti, Harald
2015-07-01
The aim of this work is to extend a widely used proton Monte Carlo tool, TOPAS, towards the modeling of relative biological effect (RBE) distributions in experimental arrangements as well as patients. TOPAS provides a software core which users configure by writing parameter files to, for instance, define application specific geometries and scoring conditions. Expert users may further extend TOPAS scoring capabilities by plugging in their own additional C++ code. This structure was utilized for the implementation of eight biophysical models suited to calculate proton RBE. As far as physics parameters are concerned, four of these models are based on the proton linear energy transfer, while the others are based on DNA double strand break induction and the frequency-mean specific energy, lineal energy, or delta electron generated track structure. The biological input parameters for all models are typically inferred from fits of the models to radiobiological experiments. The model structures have been implemented in a coherent way within the TOPAS architecture. Their performance was validated against measured experimental data on proton RBE in a spread-out Bragg peak using V79 Chinese Hamster cells. This work is an important step in bringing biologically optimized treatment planning for proton therapy closer to the clinical practice as it will allow researchers to refine and compare pre-defined as well as user-defined models.
Polster, Lisa; Schuemann, Jan; Rinaldi, Ilaria; Burigo, Lucas; McNamara, Aimee L.; Stewart, Robert D.; Attili, Andrea; Carlson, David J.; Sato, Tatsuhiko; Méndez, José Ramos; Faddegon, Bruce; Perl, Joseph; Paganetti, Harald
2015-01-01
The aim of this work is to extend a widely used proton Monte Carlo tool, TOPAS, towards the modeling of relative biological effect (RBE) distributions in experimental arrangements as well as patients. TOPAS provides a software core which users configure by writing parameter files to, for instance, define application specific geometries and scoring conditions. Expert users may further extend TOPAS scoring capabilities by plugging in their own additional C++ code. This structure was utilized for the implementation of eight biophysical models suited to calculate proton RBE. As far as physics parameters are concerned, four of these models are based on the proton linear energy transfer (LET), while the others are based on DNA Double Strand Break (DSB) induction and the frequency-mean specific energy, lineal energy, or delta electron generated track structure. The biological input parameters for all models are typically inferred from fits of the models to radiobiological experiments. The model structures have been implemented in a coherent way within the TOPAS architecture. Their performance was validated against measured experimental data on proton RBE in a spread-out Bragg peak using V79 Chinese Hamster cells. This work is an important step in bringing biologically optimized treatment planning for proton therapy closer to the clinical practice as it will allow researchers to refine and compare pre-defined as well as user-defined models. PMID:26061666
Goldman, Johnathan M; More, Haresh T; Yee, Olga; Borgeson, Elizabeth; Remy, Brenda; Rowe, Jasmine; Sadineni, Vikram
2018-06-08
Development of optimal drug product lyophilization cycles is typically accomplished via multiple engineering runs to determine appropriate process parameters. These runs require significant time and product investments, which are especially costly during early phase development when the drug product formulation and lyophilization process are often defined simultaneously. Even small changes in the formulation may require a new set of engineering runs to define lyophilization process parameters. In order to overcome these development difficulties, an eight factor definitive screening design (DSD), including both formulation and process parameters, was executed on a fully human monoclonal antibody (mAb) drug product. The DSD enables evaluation of several interdependent factors to define critical parameters that affect primary drying time and product temperature. From these parameters, a lyophilization development model is defined where near optimal process parameters can be derived for many different drug product formulations. This concept is demonstrated on a mAb drug product where statistically predicted cycle responses agree well with those measured experimentally. This design of experiments (DoE) approach for early phase lyophilization cycle development offers a workflow that significantly decreases the development time of clinically and potentially commercially viable lyophilization cycles for a platform formulation that still has variable range of compositions. Copyright © 2018. Published by Elsevier Inc.
Numerical investigation of cavitation flow in journal bearing geometry
NASA Astrophysics Data System (ADS)
Riedel, M.; Schmidt, M.; Stücke, P.
2013-04-01
The appearance of cavitation is still a problem in technical and industrial applications. Especially in automotive internal combustion engines, hydrodynamic journal bearings are used due to their favourable wearing quality and operating characteristics. Cavitation flows inside the bearings reduces the load capacity and leads to a risk of material damages. Therefore an understanding of the complex flow phenomena inside the bearing is necessary for the design development of hydrodynamic journal bearings. Experimental investigations in the fluid domain of the journal bearing are difficult to realize founded by the small dimensions of the bearing. In the recent years more and more the advantages of the computational fluid dynamics (CFD) are used to investigate the detail of the cavitation flows. The analysis in the paper is carried out in a two-step approach. At first an experimental investigation of journal bearing including cavitation is selected from the literature. The complex numerical model validated with the experimental measured data. In a second step, typically design parameters, such as a groove and feed hole, which are necessary to distribute the oil supply across the gap were added into the model. The paper reflects on the influence of the used design parameters and the variation of the additional supply flow rate through the feed hole regarding to cavitation effects in the bearing. Detailed pictures of the three-dimensional flow structures and the cavitation regions inside the flow film of the bearing are presented.
The interaction of intense subpicosecond laser pulses with underdense plasmas
DOE Office of Scientific and Technical Information (OSTI.GOV)
Coverdale, Christine Ann
1995-05-11
Laser-plasma interactions have been of interest for many years not only from a basic physics standpoint, but also for their relevance to numerous applications. Advances in laser technology in recent years have resulted in compact laser systems capable of generating (psec), 10 16 W/cm 2 laser pulses. These lasers have provided a new regime in which to study laser-plasma interactions, a regime characterized by L plasma ≥ 2L Rayleigh > cτ. The goal of this dissertation is to experimentally characterize the interaction of a short pulse, high intensity laser with an underdense plasma (n o ≤ 0.05n cr). Specifically, themore » parametric instability known as stimulated Raman scatter (SRS) is investigated to determine its behavior when driven by a short, intense laser pulse. Both the forward Raman scatter instability and backscattered Raman instability are studied. The coupled partial differential equations which describe the growth of SRS are reviewed and solved for typical experimental laser and plasma parameters. This solution shows the growth of the waves (electron plasma and scattered light) generated via stimulated Raman scatter. The dispersion relation is also derived and solved for experimentally accessible parameters. The solution of the dispersion relation is used to predict where (in k-space) and at what frequency (in ω-space) the instability will grow. Both the nonrelativistic and relativistic regimes of the instability are considered.« less
Coupled-channel analyses on 16O + 147,148,150,152,154Sm heavy-ion fusion reactions
NASA Astrophysics Data System (ADS)
Erol, Burcu; Yılmaz, Ahmet Hakan
2018-02-01
Heavy-ion collisons are typically characterized by the presence of many open reaction channels. In the energies around the Coulomb barrier, the main processes are elastic scattering, inelastic excitations of low-lying modes and fusion operations of one or two nuclei. The fusion process is generally defined as the effect of one-dimensional barrier penetration model, taking scattering potential as the sum of Coulomb and proximity potential. We have performed heay-ion fusion reactions with coupled-channel (CC) calculations. Coupled-channel formalism is carried out under barrier energy in heavy-ion fusion reactions. In this work fusion cross sections have been calculated and analyzed in detail for the five systems 16O + 147,148,150,152,154sm in the framework of coupled-channel approach (using the codes CCFUS and CCDEF) and Wong Formula. Calculated results are compared with experimental data, CC calculations using code CCFULL and with the cross section datas taken from `nrv'. CCDEF, CCFULL and Wong Formula explains the fusion reactions of heavy-ions very well, while using the scattering potential as WOODS-SAXON volume potential with Akyuz-Winther parameters. It was observed that AW potential parameters are able to reproduce the experimentally observed fusion cross sections reasonably well for these systems. There is a good agreement between the calculated results with the experimental and nrv[8] results.
Brittle failure of rock: A review and general linear criterion
NASA Astrophysics Data System (ADS)
Labuz, Joseph F.; Zeng, Feitao; Makhnenko, Roman; Li, Yuan
2018-07-01
A failure criterion typically is phenomenological since few models exist to theoretically derive the mathematical function. Indeed, a successful failure criterion is a generalization of experimental data obtained from strength tests on specimens subjected to known stress states. For isotropic rock that exhibits a pressure dependence on strength, a popular failure criterion is a linear equation in major and minor principal stresses, independent of the intermediate principal stress. A general linear failure criterion called Paul-Mohr-Coulomb (PMC) contains all three principal stresses with three material constants: friction angles for axisymmetric compression ϕc and extension ϕe and isotropic tensile strength V0. PMC provides a framework to describe a nonlinear failure surface by a set of planes "hugging" the curved surface. Brittle failure of rock is reviewed and multiaxial test methods are summarized. Equations are presented to implement PMC for fitting strength data and determining the three material parameters. A piecewise linear approximation to a nonlinear failure surface is illustrated by fitting two planes with six material parameters to form either a 6- to 12-sided pyramid or a 6- to 12- to 6-sided pyramid. The particular nature of the failure surface is dictated by the experimental data.
Full waveform inversion for ultrasonic flaw identification
NASA Astrophysics Data System (ADS)
Seidl, Robert; Rank, Ernst
2017-02-01
Ultrasonic Nondestructive Testing is concerned with detecting flaws inside components without causing physical damage. It is possible to detect flaws using ultrasound measurements but usually no additional details about the flaw like position, dimension or orientation are available. The information about these details is hidden in the recorded experimental signals. The idea of full waveform inversion is to adapt the parameters of an initial simulation model of the undamaged specimen by minimizing the discrepancy between these simulated signals and experimentally measured signals of the flawed specimen. Flaws in the structure are characterized by a change or deterioration in the material properties. Commonly, full waveform inversion is mostly applied in seismology on a larger scale to infer mechanical properties of the earth. We propose to use acoustic full waveform inversion for structural parameters to visualize the interior of the component. The method is adapted to US NDT by combining multiple similar experiments on the test component as the typical small amount of sensors is not sufficient for a successful imaging. It is shown that the combination of simulations and multiple experiments can be used to detect flaws and their position, dimension and orientation in emulated simulation cases.
Mathematical Modeling of RNA-Based Architectures for Closed Loop Control of Gene Expression.
Agrawal, Deepak K; Tang, Xun; Westbrook, Alexandra; Marshall, Ryan; Maxwell, Colin S; Lucks, Julius; Noireaux, Vincent; Beisel, Chase L; Dunlop, Mary J; Franco, Elisa
2018-05-08
Feedback allows biological systems to control gene expression precisely and reliably, even in the presence of uncertainty, by sensing and processing environmental changes. Taking inspiration from natural architectures, synthetic biologists have engineered feedback loops to tune the dynamics and improve the robustness and predictability of gene expression. However, experimental implementations of biomolecular control systems are still far from satisfying performance specifications typically achieved by electrical or mechanical control systems. To address this gap, we present mathematical models of biomolecular controllers that enable reference tracking, disturbance rejection, and tuning of the temporal response of gene expression. These controllers employ RNA transcriptional regulators to achieve closed loop control where feedback is introduced via molecular sequestration. Sensitivity analysis of the models allows us to identify which parameters influence the transient and steady state response of a target gene expression process, as well as which biologically plausible parameter values enable perfect reference tracking. We quantify performance using typical control theory metrics to characterize response properties and provide clear selection guidelines for practical applications. Our results indicate that RNA regulators are well-suited for building robust and precise feedback controllers for gene expression. Additionally, our approach illustrates several quantitative methods useful for assessing the performance of biomolecular feedback control systems.
The FTS atomic spectrum tool (FAST) for rapid analysis of line spectra
NASA Astrophysics Data System (ADS)
Ruffoni, M. P.
2013-07-01
The FTS Atomic Spectrum Tool (FAST) is an interactive graphical program designed to simplify the analysis of atomic emission line spectra obtained from Fourier transform spectrometers. Calculated, predicted and/or known experimental line parameters are loaded alongside experimentally observed spectral line profiles for easy comparison between new experimental data and existing results. Many such line profiles, which could span numerous spectra, may be viewed simultaneously to help the user detect problems from line blending or self-absorption. Once the user has determined that their experimental line profile fits are good, a key feature of FAST is the ability to calculate atomic branching fractions, transition probabilities, and oscillator strengths-and their uncertainties-which is not provided by existing analysis packages. Program SummaryProgram title: FAST: The FTS Atomic Spectrum Tool Catalogue identifier: AEOW_v1_0 Program summary URL: http://cpc.cs.qub.ac.uk/summaries/AEOW_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: GNU General Public License version 3 No. of lines in distributed program, including test data, etc.: 293058 No. of bytes in distributed program, including test data, etc.: 13809509 Distribution format: tar.gz Programming language: C++. Computer: Intel x86-based systems. Operating system: Linux/Unix/Windows. RAM: 8 MB minimum. About 50-200 MB for a typical analysis. Classification: 2.2, 2.3, 21.2. Nature of problem: Visualisation of atomic line spectra including the comparison of theoretical line parameters with experimental atomic line profiles. Accurate intensity calibration of experimental spectra, and the determination of observed relative line intensities that are needed for calculating atomic branching fractions and oscillator strengths. Solution method: FAST is centred around a graphical interface, where a user may view sets of experimental line profiles and compare them to calculated data (such as from the Kurucz database [1]), predicted line parameters, and/or previously known experimental results. With additional information on the spectral response of the spectrometer, obtained from a calibrated standard light source, FT spectra may be intensity calibrated. In turn, this permits the user to calculate atomic branching fractions and oscillator strengths, and their respective uncertainties. Running time: Open ended. Defined by the user. References: [1] R.L. Kurucz (2007). URL http://kurucz.harvard.edu/atoms/.
NASA Astrophysics Data System (ADS)
Ghasemi, A.; Borhani, S.; Viparelli, E.; Hill, K. M.
2017-12-01
The Exner equation provides a formal mathematical link between sediment transport and bed morphology. It is typically represented in a discrete formulation where there is a sharp geometric interface between the bedload layer and the bed, below which no particles are entrained. For high temporally and spatially resolved models, this is strictly correct, but typically this is applied in such a way that spatial and temporal fluctuations in the bed surface (bedforms and otherwise) are not captured. This limits the extent to which the exchange between particles in transport and the sediment bed are properly represented, particularly problematic for mixed grain size distributions that exhibit segregation. Nearly two decades ago, Parker (2000) provided a framework for a solution to this dilemma in the form of a probabilistic Exner equation, partially experimentally validated by Wong et al. (2007). We present a computational study designed to develop a physics-based framework for understanding the interplay between physical parameters of the bed and flow and parameters in the Parker (2000) probabilistic formulation. To do so we use Discrete Element Method simulations to relate local time-varying parameters to long-term macroscopic parameters. These include relating local grain size distribution and particle entrainment and deposition rates to long- average bed shear stress and the standard deviation of bed height variations. While relatively simple, these simulations reproduce long-accepted empirically determined transport behaviors such as the Meyer-Peter and Muller (1948) relationship. We also find that these simulations reproduce statistical relationships proposed by Wong et al. (2007) such as a Gaussian distribution of bed heights whose standard deviation increases with increasing bed shear stress. We demonstrate how the ensuing probabilistic formulations provide insight into the transport and deposition of both narrow and wide grain size distribution.
Low-mass neutralino dark matter in supergravity scenarios: phenomenology and naturalness
DOE Office of Scientific and Technical Information (OSTI.GOV)
Peiró, M.; Robles, S., E-mail: mpeirogarcia@gmail.com, E-mail: sandra.robles@uam.es
2017-05-01
The latest experimental results from the LHC and dark matter (DM) searches suggest that the parameter space allowed in supersymmetric theories is subject to strong reductions. These bounds are especially constraining for scenarios entailing light DM particles. Previous studies have shown that light neutralino DM in the Minimal Supersymmetric Standard Model (MSSM), with parameters defined at the electroweak scale, is still viable when the low energy spectrum of the model features light sleptons, in which case, the relic density constraint can be fulfilled. In view of this, we have investigated the viability of light neutralinos as DM candidates in themore » MSSM, with parameters defined at the grand unification scale. We have analysed the optimal choices of non-universalities in the soft supersymmetry-breaking parameters for both, gauginos and scalars, in order to avoid the stringent experimental constraints. We show that light neutralinos, with a mass as low as 25 GeV, are viable in supergravity scenarios if the gaugino mass parameters at high energy are very non universal, while the scalar masses can remain of the same order. These scenarios typically predict a very small cross section of neutralinos off protons and neutrons, thereby being very challenging for direct detection experiments. However, a potential detection of smuons and selectrons at the LHC, together with a hypothetical discovery of a gamma-ray signal from neutralino annihilations in dwarf spheroidal galaxies could shed light on this kind of solutions. Finally, we have investigated the naturalness of these scenarios, taking into account all the potential sources of tuning. Besides the electroweak fine-tuning, we have found that the tuning to reproduce the correct DM relic abundance and that to match the measured Higgs mass can also be important when estimating the total degree of naturalness.« less
Low-mass neutralino dark matter in supergravity scenarios: phenomenology and naturalness
NASA Astrophysics Data System (ADS)
Peiró, M.; Robles, S.
2017-05-01
The latest experimental results from the LHC and dark matter (DM) searches suggest that the parameter space allowed in supersymmetric theories is subject to strong reductions. These bounds are especially constraining for scenarios entailing light DM particles. Previous studies have shown that light neutralino DM in the Minimal Supersymmetric Standard Model (MSSM), with parameters defined at the electroweak scale, is still viable when the low energy spectrum of the model features light sleptons, in which case, the relic density constraint can be fulfilled. In view of this, we have investigated the viability of light neutralinos as DM candidates in the MSSM, with parameters defined at the grand unification scale. We have analysed the optimal choices of non-universalities in the soft supersymmetry-breaking parameters for both, gauginos and scalars, in order to avoid the stringent experimental constraints. We show that light neutralinos, with a mass as low as 25 GeV, are viable in supergravity scenarios if the gaugino mass parameters at high energy are very non universal, while the scalar masses can remain of the same order. These scenarios typically predict a very small cross section of neutralinos off protons and neutrons, thereby being very challenging for direct detection experiments. However, a potential detection of smuons and selectrons at the LHC, together with a hypothetical discovery of a gamma-ray signal from neutralino annihilations in dwarf spheroidal galaxies could shed light on this kind of solutions. Finally, we have investigated the naturalness of these scenarios, taking into account all the potential sources of tuning. Besides the electroweak fine-tuning, we have found that the tuning to reproduce the correct DM relic abundance and that to match the measured Higgs mass can also be important when estimating the total degree of naturalness.
Non-linear gyrokinetic simulations of microturbulence in TCV electron internal transport barriers
NASA Astrophysics Data System (ADS)
Lapillonne, X.; Brunner, S.; Sauter, O.; Villard, L.; Fable, E.; Görler, T.; Jenko, F.; Merz, F.
2011-05-01
Using the local (flux-tube) version of the Eulerian code GENE (Jenko et al 2000 Phys. Plasmas 7 1904), gyrokinetic simulations of microturbulence were carried out considering parameters relevant to electron-internal transport barriers (e-ITBs) in the TCV tokamak (Sauter et al 2005 Phys. Rev. Lett. 94 105002), generated under conditions of low or negative shear. For typical density and temperature gradients measured in such barriers, the corresponding simulated fluctuation spectra appears to simultaneously contain longer wavelength trapped electron modes (TEMs, for typically k⊥ρi < 0.5, k⊥ being the characteristic perpendicular wavenumber and ρi the ion Larmor radius) and shorter wavelength ion temperature gradient modes (ITG, k⊥ρi > 0.5). The contributions to the electron particle flux from these two types of modes are, respectively, outward/inward and may cancel each other for experimentally realistic gradients. This mechanism may partly explain the feasibility of e-ITBs. The non-linear simulation results confirm the predictions of a previously developed quasi-linear model (Fable et al 2010 Plasma Phys. Control. Fusion 52 015007), namely that the stationary condition of zero particle flux is obtained through the competitive contributions of ITG and TEM. A quantitative comparison of the electron heat flux with experimental estimates is presented as well.
Development and testing of a new system for assessing wheel-running behaviour in rodents.
Chomiak, Taylor; Block, Edward W; Brown, Andrew R; Teskey, G Campbell; Hu, Bin
2016-05-05
Wheel running is one of the most widely studied behaviours in laboratory rodents. As a result, improved approaches for the objective monitoring and gathering of more detailed information is increasingly becoming important for evaluating rodent wheel-running behaviour. Here our aim was to develop a new quantitative wheel-running system that can be used for most typical wheel-running experimental protocols. Here we devise a system that can provide a continuous waveform amenable to real-time integration with a high-speed video ideal for wheel-running experimental protocols. While quantification of wheel running behaviour has typically focused on the number of revolutions per unit time as an end point measure, the approach described here allows for more detailed information like wheel rotation fluidity, directionality, instantaneous velocity, and acceleration, in addition to total number of rotations, and the temporal pattern of wheel-running behaviour to be derived from a single trace. We further tested this system with a running-wheel behavioural paradigm that can be used for investigating the neuronal mechanisms of procedural learning and postural stability, and discuss other potentially useful applications. This system and its ability to evaluate multiple wheel-running parameters may become a useful tool for screening new potentially important therapeutic compounds related to many neurological conditions.
Influence of Process Parameters on the Process Efficiency in Laser Metal Deposition Welding
NASA Astrophysics Data System (ADS)
Güpner, Michael; Patschger, Andreas; Bliedtner, Jens
Conventionally manufactured tools are often completely constructed of a high-alloyed, expensive tool steel. An alternative way to manufacture tools is the combination of a cost-efficient, mild steel and a functional coating in the interaction zone of the tool. Thermal processing methods, like laser metal deposition, are always characterized by thermal distortion. The resistance against the thermal distortion decreases with the reduction of the material thickness. As a consequence, there is a necessity of a special process management for the laser based coating of thin parts or tools. The experimental approach in the present paper is to keep the energy and the mass per unit length constant by varying the laser power, the feed rate and the powder mass flow. The typical seam parameters are measured in order to characterize the cladding process, define process limits and evaluate the process efficiency. Ways to optimize dilution, angular distortion and clad height are presented.
Denis-Alpizar, Otoniel; Bemish, Raymond J; Meuwly, Markus
2017-03-21
Vibrational energy relaxation (VER) of diatomics following collisions with the surrounding medium is an important elementary process for modeling high-temperature gas flow. VER is characterized by two parameters: the vibrational relaxation time τ vib and the state relaxation rates. Here the vibrational relaxation of CO(ν=0←ν=1) in Ar is considered for validating a computational approach to determine the vibrational relaxation time parameter (pτ vib ) using an accurate, fully dimensional potential energy surface. For lower temperatures, comparison with experimental data shows very good agreement whereas at higher temperatures (up to 25 000 K), comparisons with an empirically modified model due to Park confirm its validity for CO in Ar. Additionally, the calculations provide insight into the importance of Δν>1 transitions that are ignored in typical applications of the Landau-Teller framework.
Synchrotron radiation from a runaway electron distribution in tokamaks
DOE Office of Scientific and Technical Information (OSTI.GOV)
Stahl, A.; Fülöp, T.; Landreman, M.
2013-09-15
The synchrotron radiation emitted by runaway electrons in a fusion plasma provides information regarding the particle momenta and pitch-angles of the runaway electron population through the strong dependence of the synchrotron spectrum on these parameters. Information about the runaway density and its spatial distribution, as well as the time evolution of the above quantities, can also be deduced. In this paper, we present the synchrotron radiation spectra for typical avalanching runaway electron distributions. Spectra obtained for a distribution of electrons are compared with the emission of mono-energetic electrons with a prescribed pitch-angle. We also examine the effects of magnetic fieldmore » curvature and analyse the sensitivity of the resulting spectrum to perturbations to the runaway distribution. The implications for the deduced runaway electron parameters are discussed. We compare our calculations to experimental data from DIII-D and estimate the maximum observed runaway energy.« less
Immiscible impact dynamics of droplets onto millimetric films
NASA Astrophysics Data System (ADS)
Shaikh, S.; Toyofuku, G.; Hoang, R.; Marston, J. O.
2018-01-01
The impact of liquid droplets onto a film of an immiscible liquid is studied experimentally across a broad range of parameters [Re = O(101-103), We = O(102-103)] with the aid of high-speed photography and image analysis. Above a critical impact parameter, Re^{1/2}We^{1/4} ≈ 100, the droplet fragments into multiple satellite droplets, which typically occurs as the result of a fingering instability. Statistical analysis indicates that the satellite droplets are approximately log-normally distributed, in agreement with some previous studies and the theoretical predictions of Wu (Prob Eng Mech 18:241-249, 2003). However, in contrast to a recent study by Lhuissier et al. (Phys Rev Lett 110:264503, 2013), we find that it is the modal satellite diameter, not the mean diameter, that scales inversely with the impact speed (or Weber number) and that the dependence is d_{mod} ˜ We^{-1/4}.
Chemical effects of alkali atoms on critical temperature in superconducting alkali-doped fullerides
NASA Astrophysics Data System (ADS)
Hetfleisch, F.; Gunnarsson, O.; Srama, R.; Han, J. E.; Stepper, M.; Roeser, H.-P.; Bohr, A.; Lopez, J. S.; Mashmool, M.; Roth, S.
2018-03-01
Alkali metal doped fullerides (A3C60) are superconductors with critical temperatures, Tc, extending up to 38 K. Tc is known to depend strongly on the lattice parameter a, which can be adjusted by physical or chemical pressure. In the latter case an alkali atom is replaced by a different sized one, which changes a. We have collected an extensive data base of experimental data for Tc from very early up to recent measurements. We disentangle alkali atom chemical effects on Tc, beyond the well-known consequences of changing a. It is found that Tc, for a fixed a, is typically increased as smaller alkali atoms are replaced by larger ones, except for very large a. Possible reasons for these results are discussed. Although smaller in size than the lattice parameter contribution, the chemical effect is not negligible and should be considered in future physical model developments.
SF-FDTD analysis of a predictive physical model for parallel aligned liquid crystal devices
NASA Astrophysics Data System (ADS)
Márquez, Andrés.; Francés, Jorge; Martínez, Francisco J.; Gallego, Sergi; Alvarez, Mariela L.; Calzado, Eva M.; Pascual, Inmaculada; Beléndez, Augusto
2017-08-01
Recently we demonstrated a novel and simplified model enabling to calculate the voltage dependent retardance provided by parallel aligned liquid crystal devices (PA-LCoS) for a very wide range of incidence angles and any wavelength in the visible. To our knowledge it represents the most simplified approach still showing predictive capability. Deeper insight into the physics behind the simplified model is necessary to understand if the parameters in the model are physically meaningful. Since the PA-LCoS is a black-box where we do not have information about the physical parameters of the device, we cannot perform this kind of analysis using the experimental retardance measurements. In this work we develop realistic simulations for the non-linear tilt of the liquid crystal director across the thickness of the liquid crystal layer in the PA devices. We consider these profiles to have a sine-like shape, which is a good approximation for typical ranges of applied voltage in commercial PA-LCoS microdisplays. For these simulations we develop a rigorous method based on the split-field finite difference time domain (SF-FDTD) technique which provides realistic retardance values. These values are used as the experimental measurements to which the simplified model is fitted. From this analysis we learn that the simplified model is very robust, providing unambiguous solutions when fitting its parameters. We also learn that two of the parameters in the model are physically meaningful, proving a useful reverse-engineering approach, with predictive capability, to probe into internal characteristics of the PA-LCoS device.
First-principles calculations reveal controlling principles for carrier mobilities in semiconductors
Wu, Yu -Ning; Zhang, Xiaoguang; Pantelides, Sokrates T.; ...
2016-10-11
It has long been believed that carrier mobilities in semiconductors can be calculated by Fermi s golden rule (Born approximation). Phenomenological models for scattering amplitudes are typically used for engineering- level device modeling. Here we introduce a parameter-free, first-principles approach based on complex- wavevector energy bands that does not invoke the Born approximation. We show that phonon-limited mobility is controlled by low-resistivity percolation paths and that in ionized-impurity scattering one must account for the effect of the screening charge, which cancels most of the Coulomb tail.Finally, calculated electron mobilities in silicon are in agreement with experimental data.
AEROFROSH: a shock condition calculator for multi-component fuel aerosol-laden flows
DOE Office of Scientific and Technical Information (OSTI.GOV)
Campbell, Matthew Frederick; Haylett, D. R.; Davidson, D. F.
Here, this paper introduces an algorithm that determines the thermodynamic conditions behind incident and reflectedshocksinaerosol-ladenflows.Importantly,the algorithm accounts for the effects of droplet evaporation on post-shock properties. Additionally, this article describes an algorithm for resolving the effects of multiple-component- fuel droplets. This article presents the solution methodology and compares the results to those of another similar shock calculator. It also provides examples to show the impact of droplets on post-shock properties and the impact that multi-component fuel droplets have on shock experimental parameters. Finally, this paper presents a detailed uncertainty analysis of this algorithm’s calculations given typical exper- imental uncertainties
Instability study for LOFT for L2-1, L2-2, and L2-3 pretest steady-state operating conditions
DOE Office of Scientific and Technical Information (OSTI.GOV)
Eide, S.A.
The results are presented of a thermal-hydrodynamic flow instability study of the LOFT reactor for the L2-1, L2-2, and L2-3 pretest steady-state operating conditions. Comparison is made between the LOFT reactor and a typical PWR, and the effects on stability of differences in operating parameters and geometry are discussed. Results indicate that the LOFT reactor will be thermal-hydrodynamically stable for nominal and worst case operating conditions. The study supports the LOFT Experimental Safety Analyses for the L2-1, L2-2, and L2-3 tests.
AEROFROSH: a shock condition calculator for multi-component fuel aerosol-laden flows
Campbell, Matthew Frederick; Haylett, D. R.; Davidson, D. F.; ...
2015-08-18
Here, this paper introduces an algorithm that determines the thermodynamic conditions behind incident and reflectedshocksinaerosol-ladenflows.Importantly,the algorithm accounts for the effects of droplet evaporation on post-shock properties. Additionally, this article describes an algorithm for resolving the effects of multiple-component- fuel droplets. This article presents the solution methodology and compares the results to those of another similar shock calculator. It also provides examples to show the impact of droplets on post-shock properties and the impact that multi-component fuel droplets have on shock experimental parameters. Finally, this paper presents a detailed uncertainty analysis of this algorithm’s calculations given typical exper- imental uncertainties
Ion extraction capabilities of two-grid accelerator systems. [for spacecraft propulsion
NASA Technical Reports Server (NTRS)
Rovang, D. C.; Wilbur, P. J.
1984-01-01
An experimental investigation into the ion extraction capabilities of two-grid accelerator systems common to electrostatic ion thrusters is described. A large body of experimental data which facilitates the selection of the accelerator system geometries and operating parameters necessary to maximize the extracted ion current is presented. Results suggest that the impingement-limited perveance is not dramatically affected by reductions in screen hole diameter to 0.5 mm. Impingement-limited performance is shown to depend most strongly on grid separation distance, accelerator hole diameter ratio, the discharge-to-total accelerating voltage ratio, and the net-to-total accelerating voltage ratio. Results obtained at small grid separation ratios suggest a new grid operating condition where high beam current per hole levels are achieved at a specified net accelerating voltage. It is shown that this operating condition is realized at an optimum ratio of net-to-total accelerating voltage ratio which is typically quite high.
Ephus: Multipurpose Data Acquisition Software for Neuroscience Experiments
Suter, Benjamin A.; O'Connor, Timothy; Iyer, Vijay; Petreanu, Leopoldo T.; Hooks, Bryan M.; Kiritani, Taro; Svoboda, Karel; Shepherd, Gordon M. G.
2010-01-01
Physiological measurements in neuroscience experiments often involve complex stimulus paradigms and multiple data channels. Ephus (http://www.ephus.org) is an open-source software package designed for general-purpose data acquisition and instrument control. Ephus operates as a collection of modular programs, including an ephys program for standard whole-cell recording with single or multiple electrodes in typical electrophysiological experiments, and a mapper program for synaptic circuit mapping experiments involving laser scanning photostimulation based on glutamate uncaging or channelrhodopsin-2 excitation. Custom user functions allow user-extensibility at multiple levels, including on-line analysis and closed-loop experiments, where experimental parameters can be changed based on recently acquired data, such as during in vivo behavioral experiments. Ephus is compatible with a variety of data acquisition and imaging hardware. This paper describes the main features and modules of Ephus and their use in representative experimental applications. PMID:21960959
NASA Technical Reports Server (NTRS)
Horton, B. E.; Bowhill, S. A.
1971-01-01
This report describes a Monte Carlo simulation of transition flow around a sphere. Conditions for the simulation correspond to neutral monatomic molecules at two altitudes (70 and 75 km) in the D region of the ionosphere. Results are presented in the form of density contours, velocity vector plots and density, velocity and temperature profiles for the two altitudes. Contours and density profiles are related to independent Monte Carlo and experimental studies, and drag coefficients are calculated and compared with available experimental data. The small computer used is a PDP-15 with 16 K of core, and a typical run for 75 km requires five iterations, each taking five hours. The results are recorded on DECTAPE to be printed when required, and the program provides error estimates for any flow field parameter.
Rotational isomerism of molecules in condensed phases
NASA Astrophysics Data System (ADS)
Sakka, Tetsuo; Iwasaki, Matae; Ogata, Yukio
1991-08-01
A statistical mechanical model is developed for the description of the conformational distribution of organic molecules in the liquid and solid phases. In the model, they are assumed to have one internal freedom of rotation. The molecules are fixed to lattice sites and have two types of ordering, conformational and distributional. The latter is supposed to represent an ordering typical of solid state. The model is compared with the experimental results of the rotational-isomeric ratio of 1,2-dichloro-1,1-difluoroethane, in the temperature range from 77 to 300 K. It explains successfully the experimental results, especially the behavior near the melting point. From the point of view of melting, the present model is an extension of the Lennard-Jones and Devonshire model, because, when the distinctions between the two conformers are neglected, the parameter representing the distributional ordering of the molecules results in the same equation as that derived from the Lennard-Jones and Devonshire model.
NASA Astrophysics Data System (ADS)
Mahler, Michael; Gaganidze, Ermile; Aktaa, Jarir
2018-04-01
The experimental observation of anisotropic fracture behaviour of round blank polycrystalline tungsten was simulated using finite element (FE) method in combination with cohesive zone model. Experiments in the past had shown that due to the anisotropic microstructure the fracture toughness varies by factor of about two for different orientations. The reason is the crack propagation direction, which is - in some orientations - not the typical crack propagation direction for mode I fracture. In some directions the crack is not growing perpendicular to the crack opening tensile load. Nevertheless, in the present paper, the microstructure is modelled by FE mesh including cohesive zone elements which mimic grain boundaries (GB). This is based on the assumption that GB's are the weakest links in the structure. The use of the correct parameters to describe the fracture process allows the description of the observed experimental orientation dependent fracture toughness.
Quantitative evaluation of statistical errors in small-angle X-ray scattering measurements
DOE Office of Scientific and Technical Information (OSTI.GOV)
Sedlak, Steffen M.; Bruetzel, Linda K.; Lipfert, Jan
A new model is proposed for the measurement errors incurred in typical small-angle X-ray scattering (SAXS) experiments, which takes into account the setup geometry and physics of the measurement process. The model accurately captures the experimentally determined errors from a large range of synchrotron and in-house anode-based measurements. Its most general formulation gives for the variance of the buffer-subtracted SAXS intensity σ 2(q) = [I(q) + const.]/(kq), whereI(q) is the scattering intensity as a function of the momentum transferq;kand const. are fitting parameters that are characteristic of the experimental setup. The model gives a concrete procedure for calculating realistic measurementmore » errors for simulated SAXS profiles. In addition, the results provide guidelines for optimizing SAXS measurements, which are in line with established procedures for SAXS experiments, and enable a quantitative evaluation of measurement errors.« less
Zuthi, Mst Fazana Rahman; Guo, Wenshan; Ngo, Huu Hao; Nghiem, Duc Long; Hai, Faisal I; Xia, Siqing; Li, Jianxin; Li, Jixiang; Liu, Yi
2017-08-01
This study aimed to develop a practical semi-empirical mathematical model of membrane fouling that accounts for cake formation on the membrane and its pore blocking as the major processes of membrane fouling. In the developed model, the concentration of mixed liquor suspended solid is used as a lumped parameter to describe the formation of cake layer including the biofilm. The new model considers the combined effect of aeration and backwash on the foulants' detachment from the membrane. New exponential coefficients are also included in the model to describe the exponential increase of transmembrane pressure that typically occurs after the initial stage of an MBR operation. The model was validated using experimental data obtained from a lab-scale aerobic sponge-submerged membrane bioreactor (MBR), and the simulation of the model agreed well with the experimental findings. Copyright © 2017 Elsevier Ltd. All rights reserved.
A Simple Numerical Procedure for the Simulation of "Lifelike" Linear-Sweep Voltammograms
NASA Astrophysics Data System (ADS)
Bozzini, Benedetto P.
2000-01-01
Practical linear-sweep voltammograms seldom resemble the theoretical ones shown in textbooks. This is because several phenomena (activation, mass transport, ohmic resistance) control the kinetics over different potential ranges scanned during the potential sweep. These effects are generally treated separately in the didactic literature, yet they have never been "assembled" in a way that allows the educational use of real experiments. This makes linear-sweep voltammetric experiments almost unusable in the teaching of physical chemistry. A simple approach to the classroom description of "lifelike" experimental results is proposed in this paper. Analytical expressions of linear sweep voltammograms are provided. The actual numerical evaluations can be carried out with a pocket calculator. Two typical examples are executed and comparison with experimental data is described. This approach to teaching electrode kinetics has proved an effective tool to provide students with an insight into the effects of electrochemical parameters and operating conditions.
Rybin, Mikhail V.; Samusev, Kirill B.; Lukashenko, Stanislav Yu.; Kivshar, Yuri S.; Limonov, Mikhail F.
2016-01-01
We study experimentally a fine structure of the optical Laue diffraction from two-dimensional periodic photonic lattices. The periodic photonic lattices with the C4v square symmetry, orthogonal C2v symmetry, and hexagonal C6v symmetry are composed of submicron dielectric elements fabricated by the direct laser writing technique. We observe surprisingly strong optical diffraction from a finite number of elements that provides an excellent tool to determine not only the symmetry but also exact number of particles in the finite-length structure and the sample shape. Using different samples with orthogonal C2v symmetry and varying the lattice spacing, we observe experimentally a transition between the regime of multi-order diffraction, being typical for photonic crystals to the regime where only the zero-order diffraction can be observed, being is a clear fingerprint of dielectric metasurfaces characterized by effective parameters. PMID:27491952
Composing problem solvers for simulation experimentation: a case study on steady state estimation.
Leye, Stefan; Ewald, Roland; Uhrmacher, Adelinde M
2014-01-01
Simulation experiments involve various sub-tasks, e.g., parameter optimization, simulation execution, or output data analysis. Many algorithms can be applied to such tasks, but their performance depends on the given problem. Steady state estimation in systems biology is a typical example for this: several estimators have been proposed, each with its own (dis-)advantages. Experimenters, therefore, must choose from the available options, even though they may not be aware of the consequences. To support those users, we propose a general scheme to aggregate such algorithms to so-called synthetic problem solvers, which exploit algorithm differences to improve overall performance. Our approach subsumes various aggregation mechanisms, supports automatic configuration from training data (e.g., via ensemble learning or portfolio selection), and extends the plugin system of the open source modeling and simulation framework James II. We show the benefits of our approach by applying it to steady state estimation for cell-biological models.
Prediction and typicality in multiverse cosmology
NASA Astrophysics Data System (ADS)
Azhar, Feraz
2014-02-01
In the absence of a fundamental theory that precisely predicts values for observable parameters, anthropic reasoning attempts to constrain probability distributions over those parameters in order to facilitate the extraction of testable predictions. The utility of this approach has been vigorously debated of late, particularly in light of theories that claim we live in a multiverse, where parameters may take differing values in regions lying outside our observable horizon. Within this cosmological framework, we investigate the efficacy of top-down anthropic reasoning based on the weak anthropic principle. We argue contrary to recent claims that it is not clear one can either dispense with notions of typicality altogether or presume typicality, in comparing resulting probability distributions with observations. We show in a concrete, top-down setting related to dark matter, that assumptions about typicality can dramatically affect predictions, thereby providing a guide to how errors in reasoning regarding typicality translate to errors in the assessment of predictive power. We conjecture that this dependence on typicality is an integral feature of anthropic reasoning in broader cosmological contexts, and argue in favour of the explicit inclusion of measures of typicality in schemes invoking anthropic reasoning, with a view to extracting predictions from multiverse scenarios.
Modeling ramp-hold indentation measurements based on Kelvin-Voigt fractional derivative model
NASA Astrophysics Data System (ADS)
Zhang, Hongmei; zhe Zhang, Qing; Ruan, Litao; Duan, Junbo; Wan, Mingxi; Insana, Michael F.
2018-03-01
Interpretation of experimental data from micro- and nano-scale indentation testing is highly dependent on the constitutive model selected to relate measurements to mechanical properties. The Kelvin-Voigt fractional derivative model (KVFD) offers a compact set of viscoelastic features appropriate for characterizing soft biological materials. This paper provides a set of KVFD solutions for converting indentation testing data acquired for different geometries and scales into viscoelastic properties of soft materials. These solutions, which are mostly in closed-form, apply to ramp-hold relaxation, load-unload and ramp-load creep-testing protocols. We report on applications of these model solutions to macro- and nano-indentation testing of hydrogels, gastric cancer cells and ex vivo breast tissue samples using an atomic force microscope (AFM). We also applied KVFD models to clinical ultrasonic breast data using a compression plate as required for elasticity imaging. Together the results show that KVFD models fit a broad range of experimental data with a correlation coefficient typically R 2 > 0.99. For hydrogel samples, estimation of KVFD model parameters from test data using spherical indentation versus plate compression as well as ramp relaxation versus load-unload compression all agree within one standard deviation. Results from measurements made using macro- and nano-scale indentation agree in trend. For gastric cell and ex vivo breast tissue measurements, KVFD moduli are, respectively, 1/3-1/2 and 1/6 of the elasticity modulus found from the Sneddon model. In vivo breast tissue measurements yield model parameters consistent with literature results. The consistency of results found for a broad range of experimental parameters suggest the KVFD model is a reliable tool for exploring intrinsic features of the cell/tissue microenvironments.
An Experimental Study of Penny-shaped Fluid-driven Cracks in an Elastic Matrix
NASA Astrophysics Data System (ADS)
Stone, Howard
2015-11-01
When a pressurized fluid is injected into an elastic matrix, the fluid generates a fracture that grows along a plane and forms a fluid-filled disc-like shape. For example, such problems occur in various natural and industrial applications involving the subsurface of Earth, such as hydraulic fracturing operations. We report a laboratory study of such a fluid-driven crack in a gelatin matrix, study the crack shape as a function of time, and investigate the influence of different experimental parameters such as the injection flow rate, Young's modulus of the matrix, and fluid viscosity. We find that the crack radius increases with time as a power law, which has been predicted both for the limit where viscous effects in the flow along the crack opening control the rate of crack propagation, as well as the limit where fracture toughness controls crack propagation. We vary experimental parameters to probe the physical limits and highlight that for our typical parameters both effects can be significant. Also, we measure the time evolution of crack shape, which has not been studied before. The rescaled crack shapes collapse at longer times, based on an appropriate scaling argument, and again we compare the scaling arguments in different physical limits. The gelatin system provides a useful laboratory model for further studies of fluid-driven cracks, some of which we will mention as they are inspired by the physics of hydraulic fracturing. This work is part of the PhD thesis of Ching-Yao Lai and is a collaboration with Drs. Zhong Zheng and Jason Wexler (Princeton University) and Professor Emilie Dressaire (NYU). Department of Mechanical and Aerospace Engineering.
Interrogating the topological robustness of gene regulatory circuits by randomization
Levine, Herbert; Onuchic, Jose N.
2017-01-01
One of the most important roles of cells is performing their cellular tasks properly for survival. Cells usually achieve robust functionality, for example, cell-fate decision-making and signal transduction, through multiple layers of regulation involving many genes. Despite the combinatorial complexity of gene regulation, its quantitative behavior has been typically studied on the basis of experimentally verified core gene regulatory circuitry, composed of a small set of important elements. It is still unclear how such a core circuit operates in the presence of many other regulatory molecules and in a crowded and noisy cellular environment. Here we report a new computational method, named random circuit perturbation (RACIPE), for interrogating the robust dynamical behavior of a gene regulatory circuit even without accurate measurements of circuit kinetic parameters. RACIPE generates an ensemble of random kinetic models corresponding to a fixed circuit topology, and utilizes statistical tools to identify generic properties of the circuit. By applying RACIPE to simple toggle-switch-like motifs, we observed that the stable states of all models converge to experimentally observed gene state clusters even when the parameters are strongly perturbed. RACIPE was further applied to a proposed 22-gene network of the Epithelial-to-Mesenchymal Transition (EMT), from which we identified four experimentally observed gene states, including the states that are associated with two different types of hybrid Epithelial/Mesenchymal phenotypes. Our results suggest that dynamics of a gene circuit is mainly determined by its topology, not by detailed circuit parameters. Our work provides a theoretical foundation for circuit-based systems biology modeling. We anticipate RACIPE to be a powerful tool to predict and decode circuit design principles in an unbiased manner, and to quantitatively evaluate the robustness and heterogeneity of gene expression. PMID:28362798
Single neuron modeling and data assimilation in BNST neurons
NASA Astrophysics Data System (ADS)
Farsian, Reza
Neurons, although tiny in size, are vastly complicated systems, which are responsible for the most basic yet essential functions of any nervous system. Even the most simple models of single neurons are usually high dimensional, nonlinear, and contain many parameters and states which are unobservable in a typical neurophysiological experiment. One of the most fundamental problems in experimental neurophysiology is the estimation of these parameters and states, since knowing their values is essential in identification, model construction, and forward prediction of biological neurons. Common methods of parameter and state estimation do not perform well for neural models due to their high dimensionality and nonlinearity. In this dissertation, two alternative approaches for parameters and state estimation of biological neurons have been demonstrated: dynamical parameter estimation (DPE) and a Markov Chain Monte Carlo (MCMC) method. The first method uses elements of chaos control and synchronization theory for parameter and state estimation. MCMC is a statistical approach which uses a path integral formulation to evaluate a mean and an error bound for these unobserved parameters and states. These methods have been applied to biological system of neurons in Bed Nucleus of Stria Termialis neurons (BNST) of rats. State and parameters of neurons in both systems were estimated, and their value were used for recreating a realistic model and predicting the behavior of the neurons successfully. The knowledge of biological parameters can ultimately provide a better understanding of the internal dynamics of a neuron in order to build robust models of neuron networks.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wang, Chao Yang; Luo, Gang; Jiang, Fangming
2010-05-01
Current computational models for proton exchange membrane fuel cells (PEMFCs) include a large number of parameters such as boundary conditions, material properties, and numerous parameters used in sub-models for membrane transport, two-phase flow and electrochemistry. In order to successfully use a computational PEMFC model in design and optimization, it is important to identify critical parameters under a wide variety of operating conditions, such as relative humidity, current load, temperature, etc. Moreover, when experimental data is available in the form of polarization curves or local distribution of current and reactant/product species (e.g., O2, H2O concentrations), critical parameters can be estimated inmore » order to enable the model to better fit the data. Sensitivity analysis and parameter estimation are typically performed using manual adjustment of parameters, which is also common in parameter studies. We present work to demonstrate a systematic approach based on using a widely available toolkit developed at Sandia called DAKOTA that supports many kinds of design studies, such as sensitivity analysis as well as optimization and uncertainty quantification. In the present work, we couple a multidimensional PEMFC model (which is being developed, tested and later validated in a joint effort by a team from Penn State Univ. and Sandia National Laboratories) with DAKOTA through the mapping of model parameters to system responses. Using this interface, we demonstrate the efficiency of performing simple parameter studies as well as identifying critical parameters using sensitivity analysis. Finally, we show examples of optimization and parameter estimation using the automated capability in DAKOTA.« less
Thoracic and respirable particle definitions for human health risk assessment.
Brown, James S; Gordon, Terry; Price, Owen; Asgharian, Bahman
2013-04-10
Particle size-selective sampling refers to the collection of particles of varying sizes that potentially reach and adversely affect specific regions of the respiratory tract. Thoracic and respirable fractions are defined as the fraction of inhaled particles capable of passing beyond the larynx and ciliated airways, respectively, during inhalation. In an attempt to afford greater protection to exposed individuals, current size-selective sampling criteria overestimate the population means of particle penetration into regions of the lower respiratory tract. The purpose of our analyses was to provide estimates of the thoracic and respirable fractions for adults and children during typical activities with both nasal and oral inhalation, that may be used in the design of experimental studies and interpretation of health effects evidence. We estimated the fraction of inhaled particles (0.5-20 μm aerodynamic diameter) penetrating beyond the larynx (based on experimental data) and ciliated airways (based on a mathematical model) for an adult male, adult female, and a 10 yr old child during typical daily activities and breathing patterns. Our estimates show less penetration of coarse particulate matter into the thoracic and gas exchange regions of the respiratory tract than current size-selective criteria. Of the parameters we evaluated, particle penetration into the lower respiratory tract was most dependent on route of breathing. For typical activity levels and breathing habits, we estimated a 50% cut-size for the thoracic fraction at an aerodynamic diameter of around 3 μm in adults and 5 μm in children, whereas current ambient and occupational criteria suggest a 50% cut-size of 10 μm. By design, current size-selective sample criteria overestimate the mass of particles generally expected to penetrate into the lower respiratory tract to provide protection for individuals who may breathe orally. We provide estimates of thoracic and respirable fractions for a variety of breathing habits and activities that may benefit the design of experimental studies and interpretation of particle size-specific health effects.
Thoracic and respirable particle definitions for human health risk assessment
2013-01-01
Background Particle size-selective sampling refers to the collection of particles of varying sizes that potentially reach and adversely affect specific regions of the respiratory tract. Thoracic and respirable fractions are defined as the fraction of inhaled particles capable of passing beyond the larynx and ciliated airways, respectively, during inhalation. In an attempt to afford greater protection to exposed individuals, current size-selective sampling criteria overestimate the population means of particle penetration into regions of the lower respiratory tract. The purpose of our analyses was to provide estimates of the thoracic and respirable fractions for adults and children during typical activities with both nasal and oral inhalation, that may be used in the design of experimental studies and interpretation of health effects evidence. Methods We estimated the fraction of inhaled particles (0.5-20 μm aerodynamic diameter) penetrating beyond the larynx (based on experimental data) and ciliated airways (based on a mathematical model) for an adult male, adult female, and a 10 yr old child during typical daily activities and breathing patterns. Results Our estimates show less penetration of coarse particulate matter into the thoracic and gas exchange regions of the respiratory tract than current size-selective criteria. Of the parameters we evaluated, particle penetration into the lower respiratory tract was most dependent on route of breathing. For typical activity levels and breathing habits, we estimated a 50% cut-size for the thoracic fraction at an aerodynamic diameter of around 3 μm in adults and 5 μm in children, whereas current ambient and occupational criteria suggest a 50% cut-size of 10 μm. Conclusions By design, current size-selective sample criteria overestimate the mass of particles generally expected to penetrate into the lower respiratory tract to provide protection for individuals who may breathe orally. We provide estimates of thoracic and respirable fractions for a variety of breathing habits and activities that may benefit the design of experimental studies and interpretation of particle size-specific health effects. PMID:23575443
Muon g - 2 in the aligned two Higgs doublet model
Han, Tao; Kang, Sin Kyu; Sayre, Joshua
2016-02-16
In this paper, we study the Two-Higgs-Doublet Model with the aligned Yukawa sector (A2HDM) in light of the observed excess measured in the muon anomalous magnetic moment. We take into account the existing theoretical and experimental constraints with up-to-date values and demonstrate that a phenomenologically interesting region of parameter space exists. With a detailed parameter scan, we show a much larger region of viable parameter space in this model beyond the limiting case Type X 2HDM as obtained before. It features the existence of light scalar states with masses 3 GeV ≲ m H ≲ 50 GeV, or 10 GeVmore » ≲ m A ≲ 130 GeV, with enhanced couplings to tau leptons. The charged Higgs boson is typically heavier, with 200 GeV ≲ m H+ ≲ 630 GeV. The surviving parameter space is forced into the CP-conserving limit by EDM constraints. Some Standard Model observables may be significantly modified, including a possible new decay mode of the SMlike Higgs boson to four taus. Lastly, we comment on future measurements and direct searches for those effects at the LHC as tests of the model.« less
Astashkin, Andrei V; Neese, Frank; Raitsimring, Arnold M; Cooney, J Jon A; Bultman, Eric; Enemark, John H
2005-11-30
Ka band ESEEM spectroscopy was used to determine the hyperfine (hfi) and nuclear quadrupole (nqi) interaction parameters for the oxo-17O ligand in [Mo 17O(SPh)4]-, a spectroscopic model of the oxo-Mo(V) centers of enzymes. The isotropic hfi constant of 6.5 MHz found for the oxo-17O is much smaller than the values of approximately 20-40 MHz typical for the 17O nucleus of an equatorial OH(2) ligand in molybdenum enzymes. The 17O nqi parameter (e2qQ/h = 1.45 MHz, eta approximately = 0) is the first to be obtained for an oxo group in a metal complex. The parameters of the oxo-17O ligand, as well as other magnetic resonance parameters of [Mo 17O(SPh)4]- predicted by quasi-relativistic DFT calculations, were in good agreement with those obtained in experiment. From the electronic structure of the complex revealed by DFT, it follows that the SOMO is almost entirely molybdenum d(xy) and sulfur p, while the spin density on the oxo-17O is negative, determined by spin polarization mechanisms. The results of this work will enable direct experimental identification of the oxo ligand in a variety of chemical and biological systems.
Homeopathic pathogenetic trials produce specific symptoms different from placebo.
Möllinger, Heribert; Schneider, Rainer; Walach, Harald
2009-04-01
Homeopathy uses information gathered from healthy volunteers taking homeopathic substances (pathogenetic trials) for clinical treatment. It is controversial whether such studies produce symptoms different from those produced by placebo. To test whether homeopathic preparations produce different symptoms than placebo in healthy volunteers. Three armed, double-blind, placebo controlled randomised experimental pathogenetic study in 25 healthy volunteers who took either one of two homeopathic remedies, Natrum muriaticum and Arsenicum album in 30CH or identical placebo. Main outcome parameter was the number of remedy-specific symptoms per group. On average, 6 symptoms typical for Arsenicum album were experienced by participants taking arsenicum album, 5 symptoms typical for Natrum muriaticum by those taking natrum muriaticum, and 11 non-specific symptoms by those in the placebo group. Differences were significant overall (Kruskall Wallis test, p = 0.0002,) and significantly different from placebo (Mann-Whitney test, p = 0.001). Homeopathic remedies produce different symptoms than placebo. Copyright (c) 2009 S. Karger AG, Basel.
NASA Technical Reports Server (NTRS)
Carlson, John R.
1996-01-01
The ability of the three-dimensional Navier-Stokes method, PAB3D, to simulate the effect of Reynolds number variation using non-linear explicit algebraic Reynolds stress turbulence modeling was assessed. Subsonic flat plate boundary-layer flow parameters such as normalized velocity distributions, local and average skin friction, and shape factor were compared with DNS calculations and classical theory at various local Reynolds numbers up to 180 million. Additionally, surface pressure coefficient distributions and integrated drag predictions on an axisymmetric nozzle afterbody were compared with experimental data from 10 to 130 million Reynolds number. The high Reynolds data was obtained from the NASA Langley 0.3m Transonic Cryogenic Tunnel. There was generally good agreement of surface static pressure coefficients between the CFD and measurement. The change in pressure coefficient distributions with varying Reynolds number was similar to the experimental data trends, though slightly over-predicting the effect. The computational sensitivity of viscous modeling and turbulence modeling are shown. Integrated afterbody pressure drag was typically slightly lower than the experimental data. The change in afterbody pressure drag with Reynolds number was small both experimentally and computationally, even though the shape of the distribution was somewhat modified with Reynolds number.
Influence of fusion dynamics on fission observables: A multidimensional analysis
NASA Astrophysics Data System (ADS)
Schmitt, C.; Mazurek, K.; Nadtochy, P. N.
2018-01-01
An attempt to unfold the respective influence of the fusion and fission stages on typical fission observables, and namely the neutron prescission multiplicity, is proposed. A four-dimensional dynamical stochastic Langevin model is used to calculate the decay by fission of excited compound nuclei produced in a wide set of heavy-ion collisions. The comparison of the results from such a calculation and experimental data is discussed, guided by predictions of the dynamical deterministic HICOL code for the compound-nucleus formation time. While the dependence of the latter on the entrance-channel properties can straigthforwardly explain some observations, a complex interplay between the various parameters of the reaction is found to occur in other cases. A multidimensional analysis of the respective role of these parameters, including entrance-channel asymmetry, bombarding energy, compound-nucleus fissility, angular momentum, and excitation energy, is proposed. It is shown that, depending on the size of the system, apparent inconsistencies may be deduced when projecting onto specific ordering parameters. The work suggests the possibility of delicate compensation effects in governing the measured fission observables, thereby highlighting the necessity of a multidimensional discussion.
Wimberley, Catriona J; Fischer, Kristina; Reilhac, Anthonin; Pichler, Bernd J; Gregoire, Marie Claude
2014-10-01
The partial saturation approach (PSA) is a simple, single injection experimental protocol that will estimate both B(avail) and appK(D) without the use of blood sampling. This makes it ideal for use in longitudinal studies of neurodegenerative diseases in the rodent. The aim of this study was to increase the range and applicability of the PSA by developing a data driven strategy for determining reliable regional estimates of receptor density (B(avail)) and in vivo affinity (1/appK(D)), and validate the strategy using a simulation model. The data driven method uses a time window guided by the dynamic equilibrium state of the system as opposed to using a static time window. To test the method, simulations of partial saturation experiments were generated and validated against experimental data. The experimental conditions simulated included a range of receptor occupancy levels and three different B(avail) and appK(D) values to mimic diseases states. Also the effect of using a reference region and typical PET noise on the stability and accuracy of the estimates was investigated. The investigations showed that the parameter estimates in a simulated healthy mouse, using the data driven method were within 10±30% of the simulated input for the range of occupancy levels simulated. Throughout all experimental conditions simulated, the accuracy and robustness of the estimates using the data driven method were much improved upon the typical method of using a static time window, especially at low receptor occupancy levels. Introducing a reference region caused a bias of approximately 10% over the range of occupancy levels. Based on extensive simulated experimental conditions, it was shown the data driven method provides accurate and precise estimates of B(avail) and appK(D) for a broader range of conditions compared to the original method. Copyright © 2014 Elsevier Inc. All rights reserved.
Conlan, Andrew J. K.; Line, John E.; Hiett, Kelli; Coward, Chris; Van Diemen, Pauline M.; Stevens, Mark P.; Jones, Michael A.; Gog, Julia R.; Maskell, Duncan J.
2011-01-01
Dose–response experiments characterize the relationship between infectious agents and their hosts. These experiments are routinely used to estimate the minimum effective infectious dose for an infectious agent, which is most commonly characterized by the dose at which 50 per cent of challenged hosts become infected—the ID50. In turn, the ID50 is often used to compare between different agents and quantify the effect of treatment regimes. The statistical analysis of dose–response data typically makes the assumption that hosts within a given dose group are independent. For social animals, in particular avian species, hosts are routinely housed together in groups during experimental studies. For experiments with non-infectious agents, this poses no practical or theoretical problems. However, transmission of infectious agents between co-housed animals will modify the observed dose–response relationship with implications for the estimation of the ID50 and the comparison between different agents and treatments. We derive a simple correction to the likelihood for standard dose–response models that allows us to estimate dose–response and transmission parameters simultaneously. We use this model to show that: transmission between co-housed animals reduces the apparent value of the ID50 and increases the variability between replicates leading to a distinctive all-or-nothing response; in terms of the total number of animals used, individual housing is always the most efficient experimental design for ascertaining dose–response relationships; estimates of transmission from previously published experimental data for Campylobacter spp. in chickens suggest that considerable transmission occurred, greatly increasing the uncertainty in the estimates of dose–response parameters reported in the literature. Furthermore, we demonstrate that accounting for transmission in the analysis of dose–response data for Campylobacter spp. challenges our current understanding of the differing response of chickens with respect to host-age and in vivo passage of bacteria. Our findings suggest that the age-dependence of transmissibility between hosts—rather than their susceptibility to colonization—is the mechanism behind the ‘lag-phase’ reported in commercial flocks, which are typically found to be Campylobacter free for the first 14–21 days of life. PMID:21593028
NASA Astrophysics Data System (ADS)
Mitra, Aditee; Castellani, Claudia; Gentleman, Wendy C.; Jónasdóttir, Sigrún H.; Flynn, Kevin J.; Bode, Antonio; Halsband, Claudia; Kuhn, Penelope; Licandro, Priscilla; Agersted, Mette D.; Calbet, Albert; Lindeque, Penelope K.; Koppelmann, Rolf; Møller, Eva F.; Gislason, Astthor; Nielsen, Torkel Gissel; St. John, Michael
2014-12-01
Exploring climate and anthropogenic impacts on marine ecosystems requires an understanding of how trophic components interact. However, integrative end-to-end ecosystem studies (experimental and/or modelling) are rare. Experimental investigations often concentrate on a particular group or individual species within a trophic level, while tropho-dynamic field studies typically employ either a bottom-up approach concentrating on the phytoplankton community or a top-down approach concentrating on the fish community. Likewise the emphasis within modelling studies is usually placed upon phytoplankton-dominated biogeochemistry or on aspects of fisheries regulation. In consequence the roles of zooplankton communities (protists and metazoans) linking phytoplankton and fish communities are typically under-represented if not (especially in fisheries models) ignored. Where represented in ecosystem models, zooplankton are usually incorporated in an extremely simplistic fashion, using empirical descriptions merging various interacting physiological functions governing zooplankton growth and development, and thence ignoring physiological feedback mechanisms. Here we demonstrate, within a modelled plankton food-web system, how trophic dynamics are sensitive to small changes in parameter values describing zooplankton vital rates and thus the importance of using appropriate zooplankton descriptors. Through a comprehensive review, we reveal the mismatch between empirical understanding and modelling activities identifying important issues that warrant further experimental and modelling investigation. These include: food selectivity, kinetics of prey consumption and interactions with assimilation and growth, form of voided material, mortality rates at different age-stages relative to prior nutrient history. In particular there is a need for dynamic data series in which predator and prey of known nutrient history are studied interacting under varied pH and temperature regimes.
Research on stability of nozzle-floating plate institution
NASA Astrophysics Data System (ADS)
Huang, Bin; Tao, Jiayue; Yi, Jiajing; Chen, Shijing
2016-01-01
In this paper, air hammer instability of nozzle-floating plate institution in gas lubricated force sensor were studied. Through establishment of the theoretical model for the analysis of the nozzle-floating plate institution stability, combined with air hammer stability judgment theorems, we had some simulation research on the radius of the nozzle, the radius of the pressure chamber, pressure chamber depth, orifice radius and the relationship between air supply pressure and bearing capacity, in order to explore the instability mechanism of nozzle-floating plate institution. For conducting experimental observations for the stability of two groups nozzle-floating plate institution, which have typical structural parameters conducted experimental observations. We set up a special experimental device, verify the correctness of the theoretical study and simulation results. This paper shows that in the nozzle-floating plate institution, increasing the nozzle diameter, reduced pressure chamber radius, reducing the depth of the pressure chamber and increase the supply orifice radius, and other measures is conducive to system stability. Results of this study have important implications for research and design of gas lubricated force sensor.
Experimental and theoretical study of magnetohydrodynamic ship models.
Cébron, David; Viroulet, Sylvain; Vidal, Jérémie; Masson, Jean-Paul; Viroulet, Philippe
2017-01-01
Magnetohydrodynamic (MHD) ships represent a clear demonstration of the Lorentz force in fluids, which explains the number of students practicals or exercises described on the web. However, the related literature is rather specific and no complete comparison between theory and typical small scale experiments is currently available. This work provides, in a self-consistent framework, a detailed presentation of the relevant theoretical equations for small MHD ships and experimental measurements for future benchmarks. Theoretical results of the literature are adapted to these simple battery/magnets powered ships moving on salt water. Comparison between theory and experiments are performed to validate each theoretical step such as the Tafel and the Kohlrausch laws, or the predicted ship speed. A successful agreement is obtained without any adjustable parameter. Finally, based on these results, an optimal design is then deduced from the theory. Therefore this work provides a solid theoretical and experimental ground for small scale MHD ships, by presenting in detail several approximations and how they affect the boat efficiency. Moreover, the theory is general enough to be adapted to other contexts, such as large scale ships or industrial flow measurement techniques.
Enhanced magneto-optical imaging of internal stresses in the removed surface layer
NASA Astrophysics Data System (ADS)
Agalidi, Yuriy; Kozhukhar, Pavlo; Levyi, Sergii; Turbin, Dmitriy
2015-10-01
The paper describes a software method of reconstructing the state of the removed surface layer by visualising internal stresses in the underlying layers of the sample. Such a problem typically needs to be solved as part of forensic investigation that aims to reveal original marking of a sample with removed surface layer. For example, one may be interested in serial numbers of weapons or vehicles that had the surface layer of metal removed from the number plate. Experimental results of studying gradient internal stress fields in ferromagnetic sample using the NDI method of magneto-optical imaging (MOI) are presented. Numerical modelling results of internal stresses enclosed in the surface marking region are analysed and compared to the experimental results of magneto-optical imaging (MOI). MOI correction algorithm intended for reconstructing internal stress fields in the removed surface layer by extracting stresses retained by the underlying layers is described. Limiting ratios between parameters of a marking font are defined for the considered correction algorithm. Enhanced recognition properties for hidden stresses left by marking symbols are experimentally verified and confirmed.
Song, Boqi; Peng, Limin; Fu, Feng; Liu, Meihong; Zhang, Houjiang
2016-11-22
Perforated wooden panels are typically utilized as a resonant sound absorbing material in indoor noise control. In this paper, the absorption properties of wooden panels perforated with tiny holes of 1-3 mm diameter were studied both experimentally and theoretically. The Maa-MPP (micro perforated panels) model and the Maa-Flex model were applied to predict the absorption regularities of finely perforated wooden panels. A relative impedance comparison and full-factorial experiments were carried out to verify the feasibility of the theoretical models. The results showed that the Maa-Flex model obtained good agreement with measured results. Control experiments and measurements of dynamic mechanical properties were carried out to investigate the influence of the wood characteristics. In this study, absorption properties were enhanced by sound-induced vibration. The relationship between the dynamic mechanical properties and the panel mass-spring vibration absorption was revealed. While the absorption effects of wood porous structure were not found, they were demonstrated theoretically by using acoustic wave propagation in a simplified circular pipe with a suddenly changed cross-section model. This work provides experimental and theoretical guidance for perforation parameter design.
Mechanistic modeling of modular co-rotating twin-screw extruders.
Eitzlmayr, Andreas; Koscher, Gerold; Reynolds, Gavin; Huang, Zhenyu; Booth, Jonathan; Shering, Philip; Khinast, Johannes
2014-10-20
In this study, we present a one-dimensional (1D) model of the metering zone of a modular, co-rotating twin-screw extruder for pharmaceutical hot melt extrusion (HME). The model accounts for filling ratio, pressure, melt temperature in screw channels and gaps, driving power, torque and the residence time distribution (RTD). It requires two empirical parameters for each screw element to be determined experimentally or numerically using computational fluid dynamics (CFD). The required Nusselt correlation for the heat transfer to the barrel was determined from experimental data. We present results for a fluid with a constant viscosity in comparison to literature data obtained from CFD simulations. Moreover, we show how to incorporate the rheology of a typical, non-Newtonian polymer melt, and present results in comparison to measurements. For both cases, we achieved excellent agreement. Furthermore, we present results for the RTD, based on experimental data from the literature, and found good agreement with simulations, in which the entire HME process was approximated with the metering model, assuming a constant viscosity for the polymer melt. Copyright © 2014. Published by Elsevier B.V.
Experimental and theoretical study of magnetohydrodynamic ship models
Viroulet, Sylvain; Vidal, Jérémie; Masson, Jean-Paul; Viroulet, Philippe
2017-01-01
Magnetohydrodynamic (MHD) ships represent a clear demonstration of the Lorentz force in fluids, which explains the number of students practicals or exercises described on the web. However, the related literature is rather specific and no complete comparison between theory and typical small scale experiments is currently available. This work provides, in a self-consistent framework, a detailed presentation of the relevant theoretical equations for small MHD ships and experimental measurements for future benchmarks. Theoretical results of the literature are adapted to these simple battery/magnets powered ships moving on salt water. Comparison between theory and experiments are performed to validate each theoretical step such as the Tafel and the Kohlrausch laws, or the predicted ship speed. A successful agreement is obtained without any adjustable parameter. Finally, based on these results, an optimal design is then deduced from the theory. Therefore this work provides a solid theoretical and experimental ground for small scale MHD ships, by presenting in detail several approximations and how they affect the boat efficiency. Moreover, the theory is general enough to be adapted to other contexts, such as large scale ships or industrial flow measurement techniques. PMID:28665941
Constitutive formulations for the mechanical investigation of colonic tissues.
Carniel, Emanuele Luigi; Gramigna, Vera; Fontanella, Chiara Giulia; Stefanini, Cesare; Natali, Arturo N
2014-05-01
A constitutive framework is provided for the characterization of the mechanical behavior of colonic tissues, as a fundamental tool for the development of numerical models of the colonic structures. The constitutive analysis is performed by a multidisciplinary approach that requires the cooperation between experimental and computational competences. The preliminary investigation pertains to the review of the tissues histology. The complex structural configuration of the tissues and the specific distributions of fibrous elements entail the nonlinear mechanical behavior and the anisotropic response. The identification of the mechanical properties requires to perform mechanical tests according to different loading situations, as different loading directions. Because of the typical functionality of colon structures, the tissues mechanics is investigated by tensile tests, which are performed on taenia coli and haustra specimens from fresh pig colons. Accounting for the histological investigation and the results from the mechanical tests, a specific hyperelastic framework is provided within the theory of fiber-reinforced composite materials. Preliminary analytical formulations are defined to identify the constitutive parameters by the inverse analysis of the experimental tests. Finite element models of the specimens are developed accounting for the actual configuration of the colon structures to verify the quality of the results. The good agreement between experimental and numerical model results suggests the reliability of the constitutive formulations and parameters. Finally, the developed constitutive analysis makes it possible to identify the mechanical behavior and properties of the different colonic tissues. Copyright © 2013 Wiley Periodicals, Inc.
NASA Astrophysics Data System (ADS)
Arhonditsis, G.; Giourga, C.; Loumou, A.; Koulouri, M.
2002-09-01
Three mathematical models, the runoff curve number equation, the universal soil loss equation, and the mass response functions, were evaluated for predicting nonpoint source nutrient loading from agricultural watersheds of the Mediterranean region. These methodologies were applied to a catchment, the gulf of Gera Basin, that is a typical terrestrial ecosystem of the islands of the Aegean archipelago. The calibration of the model parameters was based on data from experimental plots from which edge-of-field losses of sediment, water runoff, and nutrients were measured. Special emphasis was given to the transport of dissolved and solid-phase nutrients from their sources in the farmers' fields to the outlet of the watershed in order to estimate respective attenuation rates. It was found that nonpoint nutrient loading due to surface losses was high during winter, the contribution being between 50% and 80% of the total annual nutrient losses from the terrestrial ecosystem. The good fit between simulated and experimental data supports the view that these modeling procedures should be considered as reliable and effective methodological tools in Mediterranean areas for evaluating potential control measures, such as management practices for soil and water conservation and changes in land uses, aimed at diminishing soil loss and nutrient delivery to surface waters. Furthermore, the modifications of the general mathematical formulations and the experimental values of the model parameters provided by the study can be used in further application of these methodologies in watersheds with similar characteristics.
NASA Astrophysics Data System (ADS)
Svensson, Urban; Löfgren, Martin; Trinchero, Paolo; Selroos, Jan-Olof
2018-04-01
In sparsely fractured rock, the ubiquitous heterogeneity of the matrix, which has been observed in different laboratory and in situ experiments, has been shown to have a significant influence on retardation mechanisms that are of importance for the safety of deep geological repositories for nuclear waste. Here, we propose a conceptualisation of a typical heterogeneous granitic rock matrix based on micro-Discrete Fracture Networks (micro-DFN). Different sets of fractures are used to represent grain-boundary pores as well as micro fractures that transect different mineral grains. The micro-DFN model offers a great flexibility in the way inter- and intra-granular space is represented as the different parameters that characterise each fracture set can be fine tuned to represent samples of different characteristics. Here, the parameters of the model have been calibrated against experimental observations from granitic rock samples taken at Forsmark (Sweden) and different variant cases have been used to illustrate how the model can be tied to rock samples with different attributes. Numerical through-diffusion simulations have been carried out to infer the bulk properties of the model as well as to compare the computed mass flux with the experimental data from an analogous laboratory experiment. The general good agreement between the model results and the experimental observations shows that the model presented here is a reliable tool for the understanding of retardation mechanisms occurring at the mm-scale in the matrix.
Parametrization of DFTB3/3OB for Magnesium and Zinc for Chemical and Biological Applications
2015-01-01
We report the parametrization of the approximate density functional theory, DFTB3, for magnesium and zinc for chemical and biological applications. The parametrization strategy follows that established in previous work that parametrized several key main group elements (O, N, C, H, P, and S). This 3OB set of parameters can thus be used to study many chemical and biochemical systems. The parameters are benchmarked using both gas-phase and condensed-phase systems. The gas-phase results are compared to DFT (mostly B3LYP), ab initio (MP2 and G3B3), and PM6, as well as to a previous DFTB parametrization (MIO). The results indicate that DFTB3/3OB is particularly successful at predicting structures, including rather complex dinuclear metalloenzyme active sites, while being semiquantitative (with a typical mean absolute deviation (MAD) of ∼3–5 kcal/mol) for energetics. Single-point calculations with high-level quantum mechanics (QM) methods generally lead to very satisfying (a typical MAD of ∼1 kcal/mol) energetic properties. DFTB3/MM simulations for solution and two enzyme systems also lead to encouraging structural and energetic properties in comparison to available experimental data. The remaining limitations of DFTB3, such as the treatment of interaction between metal ions and highly charged/polarizable ligands, are also discussed. PMID:25178644
NASA Technical Reports Server (NTRS)
Hansman, R. J., Jr.
1982-01-01
The feasibility of computerized simulation of the physics of advanced microwave anti-icing systems, which preheat impinging supercooled water droplets prior to impact, was investigated. Theoretical and experimental work performed to create a physically realistic simulation is described. The behavior of the absorption cross section for melting ice particles was measured by a resonant cavity technique and found to agree with theoretical predictions. Values of the dielectric parameters of supercooled water were measured by a similar technique at lambda = 2.82 cm down to -17 C. The hydrodynamic behavior of accelerated water droplets was studied photograhically in a wind tunnel. Droplets were found to initially deform as oblate spheroids and to eventually become unstable and break up in Bessel function modes for large values of acceleration or droplet size. This confirms the theory as to the maximum stable droplet size in the atmosphere. A computer code which predicts droplet trajectories in an arbitrary flow field was written and confirmed experimentally. The results were consolidated into a simulation to study the heating by electromagnetic fields of droplets impinging onto an object such as an airfoil. It was determined that there is sufficient time to heat droplets prior to impact for typical parameter values. Design curves for such a system are presented.
NASA Astrophysics Data System (ADS)
Zhou, Yu; Cheng, Yan; Chen, Xiang-Rong; Hu, Cui-E.; Chen, Qi-Feng
2018-07-01
Topological insulators are always a hot topic owing to their various peculiar physical effects, which are useful in spintronics and quantum information processing. Herein, we systematically investigate the elastic, thermodynamic and lattice thermal conductivity of a new typical topological insulator LaAs by combining the first-principles approach and an iterative solution of the Boltzmann transport equation. The obtained elastic constants and other lattice structural parameters of LaAs are well consistent with the experimental and other theoretical results. For the first time, the lattice thermal conductivity (5.46 W/(m•K)) and mean free path (14.4 nm) of LaAs are obtained, which manifests that the LaAs is more likely to be a desirable thermoelectric material. It is noted that the obtained mode-averaged Grüneisen parameters by different ab initio simulation packages are very similar, suggesting that our results are rather responsible. From the phonon scattering rates of LaAs, we speculate that the reduction of acoustic-optical gap and the larger phonon scattering may jointly result in reduction of thermal conductivity for LaAs. Meanwhile, the temperature dependence curves of the lattice thermal conductivity, heat capacity and phonon mean free path are also presented. We expect our work can provide more information for further experimental studies.
NASA Astrophysics Data System (ADS)
Wells, M. A.; Samarasekera, I. V.; Brimacombe, J. K.; Hawbolt, E. B.; Lloyd, D. J.
1998-06-01
In Part II of this article, the experimental work undertaken to measure the effect of deformation parameters (temperature, strain, and strain rate) on the texture formation during hot deformation and the evolution during subsequent recrystallization is described. In addition, the isothermal kinetics of development of individual texture components were also determined. A neutron diffractometer was used to measure the texture in the as-hot-deformed aluminum samples, and the samples were then heat treated in a 400 °C salt bath for various lengths of time, with the texture being remeasured at various stages in the recrystallization process. Using data from the experimental program, the texture evolution during recrystallization was modeled by applying a modified form of the Avrami equation. Results indicated that, of the deformation parameters studied, textural development was most sensitive to the deformation temperature for both alloys. In addition, modeling results revealed that the Cu component ({112} <111>) was the first to recrystallize, typically followed by the S ({123} <634>) and Bs ({110} <112>) components. This is in agreement with earlier work which indicated that the Bs component was the hardest to recrystallize, possibly because it is able to deform on very few slip systems and, hence, the dislocation interaction may be low.
A mechanism of wave drag reduction in the thermal energy deposition experiments
DOE Office of Scientific and Technical Information (OSTI.GOV)
Markhotok, A., E-mail: amarhotk@phys.washington.edu
2015-06-15
Many experimental studies report reduced wave drag when thermal energy is deposited in the supersonic flow upstream of a body. Though a large amount of research on this topic has been accumulated, the exact mechanism of the drag reduction is still unknown. This paper is to fill the gap in the understanding connecting multiple stages of the observed phenomena with a single mechanism. The proposed model provides an insight on the origin of the chain of subsequent transformations in the flow leading to the reduction in wave drag, such as typical deformations of the front, changes in the gas pressuremore » and density in front of the body, the odd shapes of the deflection signals, and the shock wave extinction in the plasma area. The results of numerical simulation based on the model are presented for three types of plasma parameter distribution. The spherical and cylindrical geometry has been used to match the data with the experimental observations. The results demonstrate full ability of the model to exactly explain all the features observed in the drag reduction experiments. Analytical expressions used in the model allow separating out a number of adjustment parameters that can be used to optimize thermal energy input and thus achieve fundamentally lower drag values than that of conventional approaches.« less
NASA Astrophysics Data System (ADS)
Etesami, S. Alireza; Asadi, Ebrahim
2018-01-01
Availability of a reliable interatomic potential is one of the major challenges in utilizing molecular dynamics (MD) for simulations of metals at near the melting temperatures and melting point (MP). Here, we propose a novel approach to address this challenge in the concept of modified-embedded-atom (MEAM) interatomic potential; also, we apply the approach on iron, nickel, copper, and aluminum as case studies. We propose adding experimentally available high temperature elastic constants and MP of the element to the list of typical low temperature properties used for the development of MD interatomic potential parameters. We show that the proposed approach results in a reasonable agreement between the MD calculations of melting properties such as latent heat, expansion in melting, liquid structure factor, and solid-liquid interface stiffness and their experimental/computational counterparts. Then, we present the physical properties of mentioned elements near melting temperatures using the new MEAM parameters. We observe that the behavior of elastic constants, heat capacity and thermal linear expansion coefficient at room temperature compared to MP follows an empirical linear relation (α±β × MP) for transition metals. Furthermore, a linear relation between the tetragonal shear modulus and the enthalpy change from room temperature to MP is observed for face-centered cubic materials.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Abagnale, Carmelina, E-mail: c.abagnale@unina.it; Cardone, Massimo, E-mail: massimo.cardone@unina.it; Iodice, Paolo, E-mail: paolo.iodice@unina.it
2015-07-15
This paper describes the methodologies to appraise the power requests and environmental analysis of an electrically assisted bicycle under real driving conditions, also containing regulations and technical-science-related aspects. For this purpose, in this study, the on-road test program of an electrically assisted bicycle was executed in the urban area of Naples on different test tracks, so a general assessment about its driving behavior under several driving conditions was performed. The power requirements in different typical riding situations were estimated by a procedure based on the experimental kinematic parameters that characterize the driving dynamics collected during the real-life applications. An environmentalmore » analysis was also performed, with a methodology that takes into account the environmental assessment of a moped by measuring the experimental moped exhaust emissions of the regulated pollutants. Starting from the results acquired during the different test samples, besides, an assessment of the electric traction offered by this pedelec on the driving comfort was evaluated for different riding situations. - Highlights: • The power requirements of a pedelec in typical riding conditions were identified. • The estimated electricity consumption for battery recharging was defined. • An environmental valuation of the tested pedelec and of a moped was performed. • Emissions that could be saved utilizing a pedelec instead of a moped were derived.« less
Lytic phages obscure the cost of antibiotic resistance in Escherichia coli.
Tazzyman, Samuel J; Hall, Alex R
2015-03-17
The long-term persistence of antibiotic-resistant bacteria depends on their fitness relative to other genotypes in the absence of drugs. Outside the laboratory, viruses that parasitize bacteria (phages) are ubiquitous, but costs of antibiotic resistance are typically studied in phage-free experimental conditions. We used a mathematical model and experiments with Escherichia coli to show that lytic phages strongly affect the incidence of antibiotic resistance in drug-free conditions. Under phage parasitism, the likelihood that antibiotic-resistant genetic backgrounds spread depends on their initial frequency, mutation rate and intrinsic growth rate relative to drug-susceptible genotypes, because these parameters determine relative rates of phage-resistance evolution on different genetic backgrounds. Moreover, the average cost of antibiotic resistance in terms of intrinsic growth in the antibiotic-free experimental environment was small relative to the benefits of an increased mutation rate in the presence of phages. This is consistent with our theoretical work indicating that, under phage selection, typical costs of antibiotic resistance can be outweighed by realistic increases in mutability if drug resistance and hypermutability are genetically linked, as is frequently observed in clinical isolates. This suggests the long-term distribution of antibiotic resistance depends on the relative rates at which different lineages adapt to other types of selection, which in the case of phage parasitism is probably extremely common, as well as costs of resistance inferred by classical in vitro methods.
Lytic phages obscure the cost of antibiotic resistance in Escherichia coli
Tazzyman, Samuel J; Hall, Alex R
2015-01-01
The long-term persistence of antibiotic-resistant bacteria depends on their fitness relative to other genotypes in the absence of drugs. Outside the laboratory, viruses that parasitize bacteria (phages) are ubiquitous, but costs of antibiotic resistance are typically studied in phage-free experimental conditions. We used a mathematical model and experiments with Escherichia coli to show that lytic phages strongly affect the incidence of antibiotic resistance in drug-free conditions. Under phage parasitism, the likelihood that antibiotic-resistant genetic backgrounds spread depends on their initial frequency, mutation rate and intrinsic growth rate relative to drug-susceptible genotypes, because these parameters determine relative rates of phage-resistance evolution on different genetic backgrounds. Moreover, the average cost of antibiotic resistance in terms of intrinsic growth in the antibiotic-free experimental environment was small relative to the benefits of an increased mutation rate in the presence of phages. This is consistent with our theoretical work indicating that, under phage selection, typical costs of antibiotic resistance can be outweighed by realistic increases in mutability if drug resistance and hypermutability are genetically linked, as is frequently observed in clinical isolates. This suggests the long-term distribution of antibiotic resistance depends on the relative rates at which different lineages adapt to other types of selection, which in the case of phage parasitism is probably extremely common, as well as costs of resistance inferred by classical in vitro methods. PMID:25268496
Universally Sloppy Parameter Sensitivities in Systems Biology Models
Gutenkunst, Ryan N; Waterfall, Joshua J; Casey, Fergal P; Brown, Kevin S; Myers, Christopher R; Sethna, James P
2007-01-01
Quantitative computational models play an increasingly important role in modern biology. Such models typically involve many free parameters, and assigning their values is often a substantial obstacle to model development. Directly measuring in vivo biochemical parameters is difficult, and collectively fitting them to other experimental data often yields large parameter uncertainties. Nevertheless, in earlier work we showed in a growth-factor-signaling model that collective fitting could yield well-constrained predictions, even when it left individual parameters very poorly constrained. We also showed that the model had a “sloppy” spectrum of parameter sensitivities, with eigenvalues roughly evenly distributed over many decades. Here we use a collection of models from the literature to test whether such sloppy spectra are common in systems biology. Strikingly, we find that every model we examine has a sloppy spectrum of sensitivities. We also test several consequences of this sloppiness for building predictive models. In particular, sloppiness suggests that collective fits to even large amounts of ideal time-series data will often leave many parameters poorly constrained. Tests over our model collection are consistent with this suggestion. This difficulty with collective fits may seem to argue for direct parameter measurements, but sloppiness also implies that such measurements must be formidably precise and complete to usefully constrain many model predictions. We confirm this implication in our growth-factor-signaling model. Our results suggest that sloppy sensitivity spectra are universal in systems biology models. The prevalence of sloppiness highlights the power of collective fits and suggests that modelers should focus on predictions rather than on parameters. PMID:17922568
Universally sloppy parameter sensitivities in systems biology models.
Gutenkunst, Ryan N; Waterfall, Joshua J; Casey, Fergal P; Brown, Kevin S; Myers, Christopher R; Sethna, James P
2007-10-01
Quantitative computational models play an increasingly important role in modern biology. Such models typically involve many free parameters, and assigning their values is often a substantial obstacle to model development. Directly measuring in vivo biochemical parameters is difficult, and collectively fitting them to other experimental data often yields large parameter uncertainties. Nevertheless, in earlier work we showed in a growth-factor-signaling model that collective fitting could yield well-constrained predictions, even when it left individual parameters very poorly constrained. We also showed that the model had a "sloppy" spectrum of parameter sensitivities, with eigenvalues roughly evenly distributed over many decades. Here we use a collection of models from the literature to test whether such sloppy spectra are common in systems biology. Strikingly, we find that every model we examine has a sloppy spectrum of sensitivities. We also test several consequences of this sloppiness for building predictive models. In particular, sloppiness suggests that collective fits to even large amounts of ideal time-series data will often leave many parameters poorly constrained. Tests over our model collection are consistent with this suggestion. This difficulty with collective fits may seem to argue for direct parameter measurements, but sloppiness also implies that such measurements must be formidably precise and complete to usefully constrain many model predictions. We confirm this implication in our growth-factor-signaling model. Our results suggest that sloppy sensitivity spectra are universal in systems biology models. The prevalence of sloppiness highlights the power of collective fits and suggests that modelers should focus on predictions rather than on parameters.
Multi-pulse operation of a dissipative soliton fibre laser based on nonlinear polarisation rotation
DOE Office of Scientific and Technical Information (OSTI.GOV)
Yu, H L; Wang, X L; Zhou, P
We report an experimental observation of multiple dissipative soliton (DS) operation states in an all-normal-dispersion passively mode-locked Yb-doped fibre laser, including DS bound and oscillating states. In the bound state, multiple DSs up to 11 can coexist in the cavity. In the oscillating state, the DSs' movements are not purely random and three typical states are generalised and illustrated. A single-pulse mode-locked state is established at a high pump power by carefully adjusting the polarisation controllers. The broad spectrum indicates that it may be noise-like pulses, which can serve as a pump to generate a supercontinuum. (control of laser radiationmore » parameters)« less
The calculations of small molecular conformation energy differences by density functional method
NASA Astrophysics Data System (ADS)
Topol, I. A.; Burt, S. K.
1993-03-01
The differences in the conformational energies for the gauche (G) and trans(T) conformers of 1,2-difluoroethane and for myo-and scyllo-conformer of inositol have been calculated by local density functional method (LDF approximation) with geometry optimization using different sets of calculation parameters. It is shown that in the contrast to Hartree—Fock methods, density functional calculations reproduce the correct sign and value of the gauche effect for 1,2-difluoroethane and energy difference for both conformers of inositol. The results of normal vibrational analysis for1,2-difluoroethane showed that harmonic frequencies calculated in LDF approximation agree with experimental data with the accuracy typical for scaled large basis set Hartree—Fock calculations.
Powder metallurgy: Solid and liquid phase sintering of copper
NASA Technical Reports Server (NTRS)
Sheldon, Rex; Weiser, Martin W.
1993-01-01
Basic powder metallurgy (P/M) principles and techniques are presented in this laboratory experiment. A copper based system is used since it is relatively easy to work with and is commercially important. In addition to standard solid state sintering, small quantities of low melting metals such as tin, zinc, lead, and aluminum can be added to demonstrate liquid phase sintering and alloy formation. The Taguchi Method of experimental design was used to study the effect of particle size, pressing force, sintering temperature, and sintering time. These parameters can be easily changed to incorporate liquid phase sintering effects and some guidelines for such substitutions are presented. The experiment is typically carried out over a period of three weeks.
Cell-to-cell signaling through light: just a ghost of chance?
2013-01-01
Despite the large number of reports attributing the signaling between detached cell cultures to the electromagnetic phenomena, almost no report so far included a rigorous analysis of the possibility of such signaling. In this paper, we examine the physical feasibility of the electromagnetic communication between cells, especially through light, with regard to the ambient noise illumination. We compare theoretically attainable parameters of communication with experimentally obtained data of the photon emission from cells without a specially pronounced ability of bioluminescence. We show that the weak intensity of the emission together with an unfavorable signal-to-noise ratio, which is typical for natural conditions, represent an important obstacle to the signal detection by cells. PMID:24219796
On the origin of amplitude reduction mechanism in tapping mode atomic force microscopy
NASA Astrophysics Data System (ADS)
Keyvani, Aliasghar; Sadeghian, Hamed; Goosen, Hans; van Keulen, Fred
2018-04-01
The origin of amplitude reduction in Tapping Mode Atomic Force Microscopy (TM-AFM) is typically attributed to the shift in resonance frequency of the cantilever due to the nonlinear tip-sample interactions. In this paper, we present a different insight into the same problem which, besides explaining the amplitude reduction mechanism, provides a simple reasoning for the relationship between tip-sample interactions and operation parameters (amplitude and frequency). The proposed formulation, which attributes the amplitude reduction to an interference between the tip-sample and dither force, only deals with the linear part of the system; however, it fully agrees with experimental results and numerical solutions of the full nonlinear model of TM-AFM.
Effect of preheating on fatigue resistance of gears in spin induction coil hardening process
NASA Astrophysics Data System (ADS)
Kumar, Pawan; Aggarwal, M. L.
2018-02-01
Spin hardening inductors are typically used for fine-sized teeth gear geometry. With the proper selection of several design parameters, only the gear teeth can be case surface hardened without affecting the other surface of gear. Preheating may be done to reach an adapted high austenitizing temperature in the root circle to avoid overheating of the tooth tip during final heating. The effect of preheating of gear on control of compressive residual stresses and case hardening has been experimentally discussed in this paper. Present work is about analysing single frequency mode, preheat hardening treatment and compressive residual stresses field for hardening process of spur gear using spin hardening inductors.
Correlation parameters for the study of leeside heating on a lifting body at hypersonic speeds
NASA Technical Reports Server (NTRS)
Vidal, R. J.
1974-01-01
Leeside heating was studied with the aim of gaining some insight into: (1) the magnitude of the leeside heating rates and (2) the methods to be used to extrapolate wind tunnel leeside heating rates to the full scale flight condition. This study was based on existing experimental data obtained in a hypersonic shock tunnel on lifting body configurations that are typical of shuttle orbiter vehicles. Heat transfer was first measured on the windward side to determine the boundary layer type. Then the leeside heating was investigated with the classified boundary layer. Correlation data are given on the windward turbulent boundary layer, the windward laminar boundary layer, and the leeside surfaces.
Experimental investigations of argon and xenon ion sources
NASA Technical Reports Server (NTRS)
Kaufman, H. R.
1975-01-01
The multipole thruster was used to investigate the use of argon and xenon propellants as possible alternatives to the electric thruster propellants of mercury and cesium. The multipole approach was used because of its general high performance level. The design employed, using flat and cylindrical rolled sections of sheet metal, was selected for ease of fabrication, design, assembly, and modification. All testing was conducted in a vacuum facility and the pumping was accomplished by a 0.8 m diffusion pump together with liquid nitrogen cooled liner. Minimum discharge losses were in the 200-250 ev. ion range for both argon and xenon. Flatness parameters were typically in the 0.70-0.75 range.
Strain-induced chiral magnetic effect in Weyl semimetals
Cortijo, Alberto; Kharzeev, Dmitri; Landsteiner, Karl; ...
2016-12-19
Here, we argue that strain applied to a time-reversal and inversion breaking Weyl semimetal in a magnetic field can induce an electric current via the chiral magnetic effect. A tight-binding model is used to show that strain generically changes the locations in the Brillouin zone but also the energies of the band touching points (tips of the Weyl cones). Since axial charge in a Weyl semimetal can relax via intervalley scattering processes, the induced current will decay with a time scale given by the lifetime of a chiral quasiparticle. Lastly, we estimate the strength and lifetime of the current formore » typical material parameters and find that it should be experimentally observable.« less
Application of lab derived kinetic biodegradation parameters at the field scale
NASA Astrophysics Data System (ADS)
Schirmer, M.; Barker, J. F.; Butler, B. J.; Frind, E. O.
2003-04-01
Estimating the intrinsic remediation potential of an aquifer typically requires the accurate assessment of the biodegradation kinetics, the level of available electron acceptors and the flow field. Zero- and first-order degradation rates derived at the laboratory scale generally overpredict the rate of biodegradation when applied to the field scale, because limited electron acceptor availability and microbial growth are typically not considered. On the other hand, field estimated zero- and first-order rates are often not suitable to forecast plume development because they may be an oversimplification of the processes at the field scale and ignore several key processes, phenomena and characteristics of the aquifer. This study uses the numerical model BIO3D to link the laboratory and field scale by applying laboratory derived Monod kinetic degradation parameters to simulate a dissolved gasoline field experiment at Canadian Forces Base (CFB) Borden. All additional input parameters were derived from laboratory and field measurements or taken from the literature. The simulated results match the experimental results reasonably well without having to calibrate the model. An extensive sensitivity analysis was performed to estimate the influence of the most uncertain input parameters and to define the key controlling factors at the field scale. It is shown that the most uncertain input parameters have only a minor influence on the simulation results. Furthermore it is shown that the flow field, the amount of electron acceptor (oxygen) available and the Monod kinetic parameters have a significant influence on the simulated results. Under the field conditions modelled and the assumptions made for the simulations, it can be concluded that laboratory derived Monod kinetic parameters can adequately describe field scale degradation processes, if all controlling factors are incorporated in the field scale modelling that are not necessarily observed at the lab scale. In this way, there are no scale relationships to be found that link the laboratory and the field scale, accurately incorporating the additional processes, phenomena and characteristics, such as a) advective and dispersive transport of one or more contaminants, b) advective and dispersive transport and availability of electron acceptors, c) mass transfer limitations and d) spatial heterogeneities, at the larger scale and applying well defined lab scale parameters should accurately describe field scale processes.
Bubble Entropy: An Entropy Almost Free of Parameters.
Manis, George; Aktaruzzaman, Md; Sassi, Roberto
2017-11-01
Objective : A critical point in any definition of entropy is the selection of the parameters employed to obtain an estimate in practice. We propose a new definition of entropy aiming to reduce the significance of this selection. Methods: We call the new definition Bubble Entropy . Bubble Entropy is based on permutation entropy, where the vectors in the embedding space are ranked. We use the bubble sort algorithm for the ordering procedure and count instead the number of swaps performed for each vector. Doing so, we create a more coarse-grained distribution and then compute the entropy of this distribution. Results: Experimental results with both real and synthetic HRV signals showed that bubble entropy presents remarkable stability and exhibits increased descriptive and discriminating power compared to all other definitions, including the most popular ones. Conclusion: The definition proposed is almost free of parameters. The most common ones are the scale factor r and the embedding dimension m . In our definition, the scale factor is totally eliminated and the importance of m is significantly reduced. The proposed method presents increased stability and discriminating power. Significance: After the extensive use of some entropy measures in physiological signals, typical values for their parameters have been suggested, or at least, widely used. However, the parameters are still there, application and dataset dependent, influencing the computed value and affecting the descriptive power. Reducing their significance or eliminating them alleviates the problem, decoupling the method from the data and the application, and eliminating subjective factors. Objective : A critical point in any definition of entropy is the selection of the parameters employed to obtain an estimate in practice. We propose a new definition of entropy aiming to reduce the significance of this selection. Methods: We call the new definition Bubble Entropy . Bubble Entropy is based on permutation entropy, where the vectors in the embedding space are ranked. We use the bubble sort algorithm for the ordering procedure and count instead the number of swaps performed for each vector. Doing so, we create a more coarse-grained distribution and then compute the entropy of this distribution. Results: Experimental results with both real and synthetic HRV signals showed that bubble entropy presents remarkable stability and exhibits increased descriptive and discriminating power compared to all other definitions, including the most popular ones. Conclusion: The definition proposed is almost free of parameters. The most common ones are the scale factor r and the embedding dimension m . In our definition, the scale factor is totally eliminated and the importance of m is significantly reduced. The proposed method presents increased stability and discriminating power. Significance: After the extensive use of some entropy measures in physiological signals, typical values for their parameters have been suggested, or at least, widely used. However, the parameters are still there, application and dataset dependent, influencing the computed value and affecting the descriptive power. Reducing their significance or eliminating them alleviates the problem, decoupling the method from the data and the application, and eliminating subjective factors.
Wedge Experiment Modeling and Simulation for Reactive Flow Model Calibration
NASA Astrophysics Data System (ADS)
Maestas, Joseph T.; Dorgan, Robert J.; Sutherland, Gerrit T.
2017-06-01
Wedge experiments are a typical method for generating pop-plot data (run-to-detonation distance versus input shock pressure), which is used to assess an explosive material's initiation behavior. Such data can be utilized to calibrate reactive flow models by running hydrocode simulations and successively tweaking model parameters until a match between experiment is achieved. Typical simulations are performed in 1D and typically use a flyer impact to achieve the prescribed shock loading pressure. In this effort, a wedge experiment performed at the Army Research Lab (ARL) was modeled using CTH (SNL hydrocode) in 1D, 2D, and 3D space in order to determine if there was any justification in using simplified models. A simulation was also performed using the BCAT code (CTH companion tool) that assumes a plate impact shock loading. Results from the simulations were compared to experimental data and show that the shock imparted into an explosive specimen is accurately captured with 2D and 3D simulations, but changes significantly in 1D space and with the BCAT tool. The difference in shock profile is shown to only affect numerical predictions for large run distances. This is attributed to incorrectly capturing the energy fluence for detonation waves versus flat shock loading. Portions of this work were funded through the Joint Insensitive Munitions Technology Program.
Rosenblatt, Marcus; Timmer, Jens; Kaschek, Daniel
2016-01-01
Ordinary differential equation models have become a wide-spread approach to analyze dynamical systems and understand underlying mechanisms. Model parameters are often unknown and have to be estimated from experimental data, e.g., by maximum-likelihood estimation. In particular, models of biological systems contain a large number of parameters. To reduce the dimensionality of the parameter space, steady-state information is incorporated in the parameter estimation process. For non-linear models, analytical steady-state calculation typically leads to higher-order polynomial equations for which no closed-form solutions can be obtained. This can be circumvented by solving the steady-state equations for kinetic parameters, which results in a linear equation system with comparatively simple solutions. At the same time multiplicity of steady-state solutions is avoided, which otherwise is problematic for optimization. When solved for kinetic parameters, however, steady-state constraints tend to become negative for particular model specifications, thus, generating new types of optimization problems. Here, we present an algorithm based on graph theory that derives non-negative, analytical steady-state expressions by stepwise removal of cyclic dependencies between dynamical variables. The algorithm avoids multiple steady-state solutions by construction. We show that our method is applicable to most common classes of biochemical reaction networks containing inhibition terms, mass-action and Hill-type kinetic equations. Comparing the performance of parameter estimation for different analytical and numerical methods of incorporating steady-state information, we show that our approach is especially well-tailored to guarantee a high success rate of optimization. PMID:27243005
Rosenblatt, Marcus; Timmer, Jens; Kaschek, Daniel
2016-01-01
Ordinary differential equation models have become a wide-spread approach to analyze dynamical systems and understand underlying mechanisms. Model parameters are often unknown and have to be estimated from experimental data, e.g., by maximum-likelihood estimation. In particular, models of biological systems contain a large number of parameters. To reduce the dimensionality of the parameter space, steady-state information is incorporated in the parameter estimation process. For non-linear models, analytical steady-state calculation typically leads to higher-order polynomial equations for which no closed-form solutions can be obtained. This can be circumvented by solving the steady-state equations for kinetic parameters, which results in a linear equation system with comparatively simple solutions. At the same time multiplicity of steady-state solutions is avoided, which otherwise is problematic for optimization. When solved for kinetic parameters, however, steady-state constraints tend to become negative for particular model specifications, thus, generating new types of optimization problems. Here, we present an algorithm based on graph theory that derives non-negative, analytical steady-state expressions by stepwise removal of cyclic dependencies between dynamical variables. The algorithm avoids multiple steady-state solutions by construction. We show that our method is applicable to most common classes of biochemical reaction networks containing inhibition terms, mass-action and Hill-type kinetic equations. Comparing the performance of parameter estimation for different analytical and numerical methods of incorporating steady-state information, we show that our approach is especially well-tailored to guarantee a high success rate of optimization.
NASA Astrophysics Data System (ADS)
Anil Kumar, K. S.; Murigendrappa, S. M.; Kumar, Hemantha
2017-07-01
In the present study, optimum friction stir weld parameters such as plunge depth, tool rotation speed and traverse speed for butt weld of dissimilar aluminum alloy plates, typically 2024-T351 and 7075-T651, are investigated using a bottom-up approach. In the approach, optimum FSW parameters are achieved by varying any one parameter for every trial while remaining parameters are kept constant. The specimens are extracted from the friction stir-welded plates for studying the tensile, hardness and microstructure properties. Optimum friction stir weld individual parameters are selected based on the highest ultimate tensile strength of the friction stir-welded butt joint specimens produced by varying in each case one parameter and keeping the other two constant. The microstructure samples were investigated for presence of defects, grain refinement at the weld nugget (WN), bonding between the two materials and interface of WN, TMAZ (thermomechanically affected zone) of both advancing and retreating sides of the dissimilar joints using optical microscopy and scanning electron microscopy analyses. In the experimental investigations, the optimum FSW parameters such as plunge depth, 6.2 mm, rotation speed, 650 rpm and traverse speed of 150 mm/min result in ultimate tensile strength, 435 MPa, yield strength, 290 MPa, weld joint efficiency, 92% and maximum elongation, 13%. The microstructure of optimized sample in the WN region revealed alternate lamellae material flow pattern with better metallurgical properties, defect free and very fine equiaxed grain size of about 3-5 µm.
Barrera-Figueroa, Salvador; Rasmussen, Knud; Jacobsen, Finn
2009-10-01
Typically, numerical calculations of the pressure, free-field, and random-incidence response of a condenser microphone are carried out on the basis of an assumed displacement distribution of the diaphragm of the microphone; the conventional assumption is that the displacement follows a Bessel function. This assumption is probably valid at frequencies below the resonance frequency. However, at higher frequencies the movement of the membrane is heavily coupled with the damping of the air film between membrane and backplate and with resonances in the back chamber of the microphone. A solution to this problem is to measure the velocity distribution of the membrane by means of a non-contact method, such as laser vibrometry. The measured velocity distribution can be used together with a numerical formulation such as the boundary element method for estimating the microphone response and other parameters, e.g., the acoustic center. In this work, such a hybrid method is presented and examined. The velocity distributions of a number of condenser microphones have been determined using a laser vibrometer, and these measured velocity distributions have been used for estimating microphone responses and other parameters. The agreement with experimental data is generally good. The method can be used as an alternative for validating the parameters of the microphones determined by classical calibration techniques.
NASA Astrophysics Data System (ADS)
Zhuang, Jyun-Rong; Lee, Yee-Ting; Hsieh, Wen-Hsin; Yang, An-Shik
2018-07-01
Selective laser melting (SLM) shows a positive prospect as an additive manufacturing (AM) technique for fabrication of 3D parts with complicated structures. A transient thermal model was developed by the finite element method (FEM) to simulate the thermal behavior for predicting the time evolution of temperature field and melt pool dimensions of Ti6Al4V powder during SLM. The FEM predictions were then compared with published experimental measurements and calculation results for model validation. This study applied the design of experiment (DOE) scheme together with the response surface method (RSM) to conduct the regression analysis based on four processing parameters (exactly, the laser power, scanning speed, preheating temperature and hatch space) for predicting the dimensions of the melt pool in SLM. The preliminary RSM results were used to quantify the effects of those parameters on the melt pool size. The process window was further implemented via two criteria of the width and depth of the molten pool to screen impractical conditions of four parameters for including the practical ranges of processing parameters. The FEM simulations confirmed the good accuracy of the critical RSM models in the predictions of melt pool dimensions for three typical SLM working scenarios.
Demonstration of a vectorial optical field generator with adaptive close loop control.
Chen, Jian; Kong, Lingjiang; Zhan, Qiwen
2017-12-01
We experimentally demonstrate a vectorial optical field generator (VOF-Gen) with an adaptive close loop control. The close loop control capability is illustrated with the calibration of polarization modulation of the system. To calibrate the polarization ratio modulation, we generate 45° linearly polarized beam and make it propagate through a linear analyzer whose transmission axis is orthogonal to the incident beam. For the retardation calibration, circularly polarized beam is employed and a circular polarization analyzer with the opposite chirality is placed in front of the CCD as the detector. In both cases, the close loop control automatically changes the value of the corresponding calibration parameters in the pre-set ranges to generate the phase patterns applied to the spatial light modulators and records the intensity distribution of the output beam by the CCD camera. The optimized calibration parameters are determined corresponding to the minimum total intensity in each case. Several typical kinds of vectorial optical beams are created with and without the obtained calibration parameters, and the full Stokes parameter measurements are carried out to quantitatively analyze the polarization distribution of the generated beams. The comparisons among these results clearly show that the obtained calibration parameters could remarkably improve the accuracy of the polarization modulation of the VOF-Gen, especially for generating elliptically polarized beam with large ellipticity, indicating the significance of the presented close loop in enhancing the performance of the VOF-Gen.
NASA Astrophysics Data System (ADS)
Rielly, Matthew Robert
An existing numerical model (known as the Bergen code) is used to investigate finite amplitude ultrasound propagation through multiple layers of tissue-like media. This model uses a finite difference method to solve the nonlinear parabolic KZK wave equation. The code is modified to include an arbitrary frequency dependence of absorption and transmission effects for wave propagation across a plane interface at normal incidence. In addition the code is adapted to calculate the total intensity loss associated with the absorption of the fundamental and nonlinearly generated harmonics. Measurements are also taken of the axial nonlinear pressure field generated from a circular focused, 2.25 MHz source, through single and multiple layered tissue mimicking fluids, for source pressures in the range from 13 kPa to 310 kPa. Two tissue mimicking fluids are developed to provide acoustic properties similar to amniotic fluid and a typical soft tissue. The values of the nonlinearity parameter, sound velocity and frequency dependence of attenuation for both fluids are presented, and the measurement procedures employed to obtain these characteristics are described in detail. These acoustic parameters, together with the measured source conditions are used as input to the numerical model, allowing the experimental conditions to be simulated. Extensive comparisons are made between the model's predictions and the axial pressure field measurements. Results are presented in the frequency domain showing the fundamental and three subsequent harmonic amplitudes on axis, as a function of axial distance. These show that significant nonlinear distortion can occur through media with characteristics typical of tissue. Time domain waveform comparisons are also made. An excellent agreement is found between theory and experiment indicating that the model can be used to predict nonlinear ultrasound propagation through multiple layers of tissue-like media. The numerical code is also used to model the intensity loss through layered tissue mimics and results are presented illustrating the effects of altering the layered medium on the magnitude and spatial distribution of intensity loss.
Thermodynamic Derivation of the Activation Energy for Ice Nucleation
NASA Technical Reports Server (NTRS)
Barahona, D.
2015-01-01
Cirrus clouds play a key role in the radiative and hydrological balance of the upper troposphere. Their correct representation in atmospheric models requires an understanding of the microscopic processes leading to ice nucleation. A key parameter in the theoretical description of ice nucleation is the activation energy, which controls the flux of water molecules from the bulk of the liquid to the solid during the early stages of ice formation. In most studies it is estimated by direct association with the bulk properties of water, typically viscosity and self-diffusivity. As the environment in the ice-liquid interface may differ from that of the bulk, this approach may introduce bias in calculated nucleation rates. In this work a theoretical model is proposed to describe the transfer of water molecules across the ice-liquid interface. Within this framework the activation energy naturally emerges from the combination of the energy required to break hydrogen bonds in the liquid, i.e., the bulk diffusion process, and the work dissipated from the molecular rearrangement of water molecules within the ice-liquid interface. The new expression is introduced into a generalized form of classical nucleation theory. Even though no nucleation rate measurements are used to fit any of the parameters of the theory the predicted nucleation rate is in good agreement with experimental results, even at temperature as low as 190 K, where it tends to be underestimated by most models. It is shown that the activation energy has a strong dependency on temperature and a weak dependency on water activity. Such dependencies are masked by thermodynamic effects at temperatures typical of homogeneous freezing of cloud droplets; however, they may affect the formation of ice in haze aerosol particles. The new model provides an independent estimation of the activation energy and the homogeneous ice nucleation rate, and it may help to improve the interpretation of experimental results and the development of parameterizations for cloud formation.
Continuous welding of unidirectional fiber reinforced thermoplastic tape material
NASA Astrophysics Data System (ADS)
Schledjewski, Ralf
2017-10-01
Continuous welding techniques like thermoplastic tape placement with in situ consolidation offer several advantages over traditional manufacturing processes like autoclave consolidation, thermoforming, etc. However, still there is a need to solve several important processing issues before it becomes a viable economic process. Intensive process analysis and optimization has been carried out in the past through experimental investigation, model definition and simulation development. Today process simulation is capable to predict resulting consolidation quality. Effects of material imperfections or process parameter variations are well known. But using this knowledge to control the process based on online process monitoring and according adaption of the process parameters is still challenging. Solving inverse problems and using methods for automated code generation allowing fast implementation of algorithms on targets are required. The paper explains the placement technique in general. Process-material-property-relationships and typical material imperfections are described. Furthermore, online monitoring techniques and how to use them for a model based process control system are presented.
Fast machine-learning online optimization of ultra-cold-atom experiments.
Wigley, P B; Everitt, P J; van den Hengel, A; Bastian, J W; Sooriyabandara, M A; McDonald, G D; Hardman, K S; Quinlivan, C D; Manju, P; Kuhn, C C N; Petersen, I R; Luiten, A N; Hope, J J; Robins, N P; Hush, M R
2016-05-16
We apply an online optimization process based on machine learning to the production of Bose-Einstein condensates (BEC). BEC is typically created with an exponential evaporation ramp that is optimal for ergodic dynamics with two-body s-wave interactions and no other loss rates, but likely sub-optimal for real experiments. Through repeated machine-controlled scientific experimentation and observations our 'learner' discovers an optimal evaporation ramp for BEC production. In contrast to previous work, our learner uses a Gaussian process to develop a statistical model of the relationship between the parameters it controls and the quality of the BEC produced. We demonstrate that the Gaussian process machine learner is able to discover a ramp that produces high quality BECs in 10 times fewer iterations than a previously used online optimization technique. Furthermore, we show the internal model developed can be used to determine which parameters are essential in BEC creation and which are unimportant, providing insight into the optimization process of the system.
Fast machine-learning online optimization of ultra-cold-atom experiments
Wigley, P. B.; Everitt, P. J.; van den Hengel, A.; Bastian, J. W.; Sooriyabandara, M. A.; McDonald, G. D.; Hardman, K. S.; Quinlivan, C. D.; Manju, P.; Kuhn, C. C. N.; Petersen, I. R.; Luiten, A. N.; Hope, J. J.; Robins, N. P.; Hush, M. R.
2016-01-01
We apply an online optimization process based on machine learning to the production of Bose-Einstein condensates (BEC). BEC is typically created with an exponential evaporation ramp that is optimal for ergodic dynamics with two-body s-wave interactions and no other loss rates, but likely sub-optimal for real experiments. Through repeated machine-controlled scientific experimentation and observations our ‘learner’ discovers an optimal evaporation ramp for BEC production. In contrast to previous work, our learner uses a Gaussian process to develop a statistical model of the relationship between the parameters it controls and the quality of the BEC produced. We demonstrate that the Gaussian process machine learner is able to discover a ramp that produces high quality BECs in 10 times fewer iterations than a previously used online optimization technique. Furthermore, we show the internal model developed can be used to determine which parameters are essential in BEC creation and which are unimportant, providing insight into the optimization process of the system. PMID:27180805
Modeling the atmospheric chemistry of TICs
NASA Astrophysics Data System (ADS)
Henley, Michael V.; Burns, Douglas S.; Chynwat, Veeradej; Moore, William; Plitz, Angela; Rottmann, Shawn; Hearn, John
2009-05-01
An atmospheric chemistry model that describes the behavior and disposition of environmentally hazardous compounds discharged into the atmosphere was coupled with the transport and diffusion model, SCIPUFF. The atmospheric chemistry model was developed by reducing a detailed atmospheric chemistry mechanism to a simple empirical effective degradation rate term (keff) that is a function of important meteorological parameters such as solar flux, temperature, and cloud cover. Empirically derived keff functions that describe the degradation of target toxic industrial chemicals (TICs) were derived by statistically analyzing data generated from the detailed chemistry mechanism run over a wide range of (typical) atmospheric conditions. To assess and identify areas to improve the developed atmospheric chemistry model, sensitivity and uncertainty analyses were performed to (1) quantify the sensitivity of the model output (TIC concentrations) with respect to changes in the input parameters and (2) improve, where necessary, the quality of the input data based on sensitivity results. The model predictions were evaluated against experimental data. Chamber data were used to remove the complexities of dispersion in the atmosphere.
Timescales and bottlenecks in miRNA-dependent gene regulation.
Hausser, Jean; Syed, Afzal Pasha; Selevsek, Nathalie; van Nimwegen, Erik; Jaskiewicz, Lukasz; Aebersold, Ruedi; Zavolan, Mihaela
2013-12-03
MiRNAs are post-transcriptional regulators that contribute to the establishment and maintenance of gene expression patterns. Although their biogenesis and decay appear to be under complex control, the implications of miRNA expression dynamics for the processes that they regulate are not well understood. We derived a mathematical model of miRNA-mediated gene regulation, inferred its parameters from experimental data sets, and found that the model describes well time-dependent changes in mRNA, protein and ribosome density levels measured upon miRNA transfection and induction. The inferred parameters indicate that the timescale of miRNA-dependent regulation is slower than initially thought. Delays in miRNA loading into Argonaute proteins and the slow decay of proteins relative to mRNAs can explain the typically small changes in protein levels observed upon miRNA transfection. For miRNAs to regulate protein expression on the timescale of a day, as miRNAs involved in cell-cycle regulation do, accelerated miRNA turnover is necessary.
A numerical procedure for transient free surface seepage through fracture networks
NASA Astrophysics Data System (ADS)
Jiang, Qinghui; Ye, Zuyang; Zhou, Chuangbing
2014-11-01
A parabolic variational inequality (PVI) formulation is presented for the transient free surface seepage problem defined for a whole fracture network. Because the seepage faces are specified as Signorini-type conditions, the PVI formulation can effectively eliminate the singularity of spillpoints that evolve with time. By introducing a continuous penalty function to replace the original Heaviside function, a finite element procedure based on the PVI formulation is developed to predict the transient free surface response in the fracture network. The effects of the penalty parameter on the solution precision are analyzed. A relative error formula for evaluating the flow losses at steady state caused by the penalty parameter is obtained. To validate the proposed method, three typical examples are solved. The solutions for the first example are compared with the experimental results. The results from the last two examples further demonstrate that the orientation, extent and density of fractures significantly affect the free surface seepage behavior in the fracture network.
Leakage current and capacitance characteristics of Si/SiO2/Si single-barrier varactor
NASA Astrophysics Data System (ADS)
Mamor, M.; Fu, Y.; Nur, O.; Willander, M.; Bengtsson, S.
We investigate, both experimentally and theoretically, current and capacitance (I-V/C-V) characteristics and the device performance of Si/SiO2/Si single-barrier varactor diodes (SBVs). Two diodes were fabricated with different SiO2 layer thicknesses using the state-of-the-art wafer bonding technique. The devices have very low leakage currents (about 5×10-2 and 1.8×10-2 mA/mm2) and intrinsic capacitance levels of typically 1.5 and 50 nF/mm2 for diodes with 5-nm and 20-nm oxide layers, respectively. With the present device physical parameters (25-mm2 device area, 760-μm modulation layer thickness and 1015-cm-3 doping level), the estimated cut-off frequency is about 5×107 Hz. With the physical parameters of the present existing III-V triplers, the cut-off frequency of our Si-based SBV can be as high as 0.5 THz.
Structural response of a rotating bladed disk to rotor whirl
NASA Technical Reports Server (NTRS)
Crawley, E. F.
1985-01-01
A set of high speed rotating whirl experiments were performed in the vacuum of the MIT Blowdown Compressor Facility on the MIT Aeroelastic Rotor, which is structurally typical of a modern high bypass ratio turbofan stage. These tests identified the natural frequencies of whirl of the rotor system by forcing its response using an electromagnetic shaker whirl excitation system. The excitation was slowly swept in frequency at constant amplitude for several constant rotor speeds in both a forward and backward whirl direction. The natural frequencies of whirl determined by these experiments were compared to those predicted by an analytical 6 DOF model of a flexible blade-rigid disk-flexible shaft rotor. The model is also presented in terms of nondimensional parameters in order to assess the importance of the interation between the bladed disk dynamics and the shaft-disk dynamics. The correlation between the experimental and predicted natural frequencies is reasonable, given the uncertainty involved in determining the stiffness parameters of the system.
Accurate Temperature Feedback Control for MRI-Guided, Phased Array HICU Endocavitary Therapy
NASA Astrophysics Data System (ADS)
Salomir, Rares; Rata, Mihaela; Cadis, Daniela; Lafon, Cyril; Chapelon, Jean Yves; Cotton, François; Bonmartin, Alain; Cathignol, Dominique
2007-05-01
Effective treatment of malignant tumours demands well controlled energy deposition in the region of interest. Generally, two major steps must be fulfilled: 1. pre-operative optimal planning of the thermal dosimetry and 2. per-operative active spatial-and-temporal control of the delivered thermal dose. The second issue is made possible by using fast MR thermometry data and adjusting on line the sonication parameters. This approach is addressed here in the particular case of the ultrasound therapy for endocavitary tumours (oesophagus, colon or rectum) with phased array cylindrical applicators of High Intensity Contact Ultrasound (HICU). Two specific methodological objectives have been defined for this study: 1. to implement a robust and effective temperature controller for the specific geometry of endocavitary HICU and 2. to determine the stability (ie convergence) domain of the controller with respect to possible errors affecting the empirical parameters of the underlying physical model. Experimental setup included a Philips 1.5T clinical MR scanner and a cylindrical phased array transducer (64 elements) driven by a computer-controlled multi-channel generator. Performance of the temperature controller was tested ex vivo on fresh meat samples with planar and slightly focused beams, for a temperature elevation range from 10°C to 30°C. During the steady state regime, typical error of the temperature mean value was inferior to 1%, while the typical standard deviation of the temperature was inferior to 2% (relative to the targeted temperature elevation). Further, the empirical parameters of the physical model have been deliberately set to erroneous values and the impact on the controller stability was evaluated. Excellent tolerance of the controller was demonstrated, as this one failed to performed stable feedback only in the extreme case of a strong underestimation for the ultrasound absorption parameter by a factor of 4 or more.
NASA Astrophysics Data System (ADS)
Bhatnagar, Promod K.; Gupta, Poonam; Singh, Laxman
2001-06-01
Chalcogenide based alloys find applications in a number of devices like optical memories, IR detectors, optical switches, photovoltaics, compound semiconductor heterosrtuctures etc. We have modified the Gurman's statistical thermodynamic model (STM) of binary covalent alloys. In the Gurman's model, entropy calculations are based on the number of structural units present. The need to modify this model arose due to the fact that it gives equal probability for all the tetrahedra present in the alloy. We have modified the Gurman's model by introducing the concept that the entropy is based on the bond arrangement rather than that on the structural units present. In the present work calculation based on this modification have been presented for optical properties, which find application in optical switching/memories, solar cells and other optical devices. It has been shown that the calculated optical parameters (for a typical case of GaxSe1-x) based on modified model are closer to the available experimental results. These parameters include refractive index, extinction coefficient, dielectric functions, optical band gap etc. GaxSe1-x has been found to be suitable for reversible optical memories also, where phase change (a yields c and vice versa) takes place at specified physical conditions. DTA/DSC studies also suggest the suitability of this material for optical switching/memory applications. We have also suggested possible use of GaxSe1-x (x = 0.4) in place of oxide layer in a Metal - Oxide - Semiconductor type solar cells. The new structure is Metal - Ga2Se3 - GaAs. The I-V characteristics and other parameters calculated for this structure are found to be much better than that for Si based solar cells. Maximum output power is obtained at the intermediate layer thickness approximately 40 angstroms for this typical solar cell.
Modified Mason number for charged paramagnetic colloidal suspensions
NASA Astrophysics Data System (ADS)
Du, Di; Hilou, Elaa; Biswal, Sibani Lisa
2016-06-01
The dynamics of magnetorheological fluids have typically been described by the Mason number, a governing parameter defined as the ratio between viscous and magnetic forces in the fluid. For most experimental suspensions of magnetic particles, surface forces, such as steric and electrostatic interactions, can significantly influence the dynamics. Here we propose a theory of a modified Mason number that accounts for surface forces and show that this modified Mason number is a function of interparticle distance. We demonstrate that this modified Mason number is accurate in describing the dynamics of a rotating pair of paramagnetic colloids of identical or mismatched sizes in either high or low salt solutions. The modified Mason number is confirmed to be pseudoconstant for particle pairs and particle chains undergoing a stable-metastable transition during rotation. The interparticle distance term can be calculated using theory or can be measured experimentally. This modified Mason number is more applicable to magnetorheological systems where surface forces are not negligible.
A novel biodegradable β-cyclodextrin-based hydrogel for the removal of heavy metal ions.
Huang, Zhanhua; Wu, Qinglin; Liu, Shouxin; Liu, Tian; Zhang, Bin
2013-09-12
A novel biodegradable β-cyclodextrin-based gel (CAM) was prepared and applied to the removal of Cd(2+), Pb(2+) and Cu(2+) ions from aqueous solutions. CAM hydrogel has a typical three-dimensional network structure, and showed excellent capability for the removal of heavy metal ions. The effect of different experimental parameters, such as initial pH, adsorbent dosage and initial metal ion concentration, were investigated. The adsorption isotherm data fitted well to the Freundlich model. The adsorption capacity was in the order Pb(2+)>Cu(2+)>Cd(2+) under the same experimental conditions. The maximum adsorption capacities for the metal ions in terms of mg/g of dry gel were 210.6 for Pb(2+), 116.41 for Cu(2+), and 98.88 for Cd(2+). The biodegradation efficiency of the resin reached 79.4% for Gloeophyllum trabeum. The high adsorption capacity and kinetics results indicate that CAM can be used as an alternative adsorbent to remove heavy metals from aqueous solution. Published by Elsevier Ltd.
Direct and full-scale experimental verifications towards ground-satellite quantum key distribution
NASA Astrophysics Data System (ADS)
Wang, Jian-Yu; Yang, Bin; Liao, Sheng-Kai; Zhang, Liang; Shen, Qi; Hu, Xiao-Fang; Wu, Jin-Cai; Yang, Shi-Ji; Jiang, Hao; Tang, Yan-Lin; Zhong, Bo; Liang, Hao; Liu, Wei-Yue; Hu, Yi-Hua; Huang, Yong-Mei; Qi, Bo; Ren, Ji-Gang; Pan, Ge-Sheng; Yin, Juan; Jia, Jian-Jun; Chen, Yu-Ao; Chen, Kai; Peng, Cheng-Zhi; Pan, Jian-Wei
2013-05-01
Quantum key distribution (QKD) provides the only intrinsically unconditional secure method for communication based on the principle of quantum mechanics. Compared with fibre-based demonstrations, free-space links could provide the most appealing solution for communication over much larger distances. Despite significant efforts, all realizations to date rely on stationary sites. Experimental verifications are therefore extremely crucial for applications to a typical low Earth orbit satellite. To achieve direct and full-scale verifications of our set-up, we have carried out three independent experiments with a decoy-state QKD system, and overcome all conditions. The system is operated on a moving platform (using a turntable), on a floating platform (using a hot-air balloon), and with a high-loss channel to demonstrate performances under conditions of rapid motion, attitude change, vibration, random movement of satellites, and a high-loss regime. The experiments address wide ranges of all leading parameters relevant to low Earth orbit satellites. Our results pave the way towards ground-satellite QKD and a global quantum communication network.
NASA Astrophysics Data System (ADS)
Menichetti, Roberto; Kanekal, Kiran H.; Kremer, Kurt; Bereau, Tristan
2017-09-01
The partitioning of small molecules in cell membranes—a key parameter for pharmaceutical applications—typically relies on experimentally available bulk partitioning coefficients. Computer simulations provide a structural resolution of the insertion thermodynamics via the potential of mean force but require significant sampling at the atomistic level. Here, we introduce high-throughput coarse-grained molecular dynamics simulations to screen thermodynamic properties. This application of physics-based models in a large-scale study of small molecules establishes linear relationships between partitioning coefficients and key features of the potential of mean force. This allows us to predict the structure of the insertion from bulk experimental measurements for more than 400 000 compounds. The potential of mean force hereby becomes an easily accessible quantity—already recognized for its high predictability of certain properties, e.g., passive permeation. Further, we demonstrate how coarse graining helps reduce the size of chemical space, enabling a hierarchical approach to screening small molecules.
Glass transition of charged particles in two-dimensional confinement.
Yazdi, Anoosheh; Heinen, Marco; Ivlev, Alexei; Löwen, Hartmut; Sperl, Matthias
2015-05-01
The glass transition of mesoscopic charged particles in two-dimensional confinement is studied by mode-coupling theory. We consider two types of effective interactions between the particles, corresponding to two different models for the distribution of surrounding ions that are integrated out in coarse-grained descriptions. In the first model, a planar monolayer of charged particles is immersed in an unbounded isotropic bath of ions, giving rise to an isotropically screened Debye-Hückel (Yukawa)-type effective interaction. The second, experimentally more relevant system is a monolayer of negatively charged particles that levitate atop a flat horizontal electrode, as frequently encountered in laboratory experiments with complex (dusty) plasmas. A steady plasma current toward the electrode gives rise to an anisotropic effective interaction potential between the particles, with an algebraically long-ranged in-plane decay. In a comprehensive parameter scan that covers the typical range of experimentally accessible plasma conditions, we calculate and compare the mode-coupling predictions for the glass transition in both kinds of systems.
Gas dynamics and mixture formation in swirled flows with precession of air flow
NASA Astrophysics Data System (ADS)
Tretyakov, V. V.; Sviridenkov, A. A.
2017-10-01
The effect of precessing air flow on the processes of mixture formation in the wake of the front winding devices of the combustion chambers is considered. Visual observations have shown that at different times the shape of the atomized jet is highly variable and has signs of precessing motion. The experimental data on the distribution of the velocity and concentration fields of the droplet fuel in the working volume of the flame tube of a typical combustion chamber are obtained. The method of calculating flows consisted in integrating the complete system of Reynolds equations written in Euler variables and closed with the two-parameter model of turbulence k-ε. Calculation of the concentration fields of droplet and vapor fuel is based on the use of models for disintegration into droplets of fuel jets, fragmentation of droplets and analysis of motion and evaporation of individual droplets in the air flow. Comparison of the calculation results with experimental data showed their good agreement.
PSYCHE Pure Shift NMR Spectroscopy.
Foroozandeh, Mohammadali; Morris, Gareth; Nilsson, Mathias
2018-03-13
Broadband homodecoupling techniques in NMR, also known as "pure shift" methods, aim to enhance spectral resolution by suppressing the effects of homonuclear coupling interactions to turn multiplet signals into singlets. Such techniques typically work by selecting a subset of "active" nuclear spins to observe, and selectively inverting the remaining, "passive", spins to reverse the effects of coupling. Pure Shift Yielded by Chirp Excitation (PSYCHE) is one such method; it is relatively recent, but has already been successfully implemented in a range of different NMR experiments. Paradoxically, PSYCHE is one of the trickiest of pure shift NMR techniques to understand but one of the easiest to use. Here we offer some insights into theoretical and practical aspects of the method, and into the effects and importance of the experimental parameters. Some recent improvements that enhance the spectral purity of PSYCHE spectra will be presented, and some experimental frameworks including examples in 1D and 2D NMR spectroscopy, for the implementation of PSYCHE will be introduced. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Studying action representation in children via motor imagery.
Gabbard, Carl
2009-12-01
The use of motor imagery is a widely used experimental paradigm for the study of cognitive aspects of action planning and control in adults. Furthermore, there are indications that motor imagery provides a window into the process of action representation. These notions complement internal model theory suggesting that such representations allow predictions (estimates) about the mapping of the self to parameters of the external world; processes that enable successful planning and execution of action. The ability to mentally represent action is important to the development of motor control. This paper presents a critical review of motor imagery research conducted with children (typically developing and special populations) with focus on its merits and possible shortcomings in studying action representation. Included in the review are age-related findings, possible brain structures involved, experimental paradigms, and recommendations for future work. The merits of this review are associated with the apparent increasing attraction for using and studying motor imagery to understand the developmental aspects of action processing in children.
NASA Astrophysics Data System (ADS)
Laville, Stéphane; Goueguel, Christian; Loudyi, Hakim; Vidal, François; Chaker, Mohamed; Sabsabi, Mohamad
2009-04-01
The combination of the laser-induced breakdown spectroscopy (LIBS) and laser-induced fluorescence (LIF) techniques was investigated to improve the limit of detection (LoD) of trace elements in solid matrices. The influence of the main experimental parameters on the LIF signal, namely the ablation fluence, the excitation energy, and the inter-pulse delay, was studied experimentally and a discussion of the results was presented. For illustrative purpose we considered detection of lead in brass samples. The plasma was produced by a Q-switched Nd:YAG laser and then re-excited by a nanosecond Optical Parametric Oscillator (OPO) laser. The experiments were performed in air at atmospheric pressure. We found out that the optimal conditions were obtained for our experimental set-up using relatively weak ablation fluence of 2-3 J/cm 2 and an inter-pulse delay of about 5-10 μs. Also, a few tens of microjoules was typically required to maximize the LIF signal. Using the LIBS-LIFS technique, a single-shot LoD for lead of about 1.5 part per million (ppm) was obtained while a value of 0.2 ppm was obtained after accumulating over 100 shots. These values represent an improvement of about two orders of magnitude with respect to LIBS.
Numerical investigation and experimental development on VM-PT cryocooler operating below 4 K
NASA Astrophysics Data System (ADS)
Zhang, Tong; Pan, Changzhao; Zhou, Yuan; Wang, Junjie
2016-12-01
Vuilleumier coupling pulse tube (VM-PT) cryocooler is a novel kind of cryocooler capable of attaining liquid helium temperature which had been experimentally verified. Depending on different coupling modes and phase shifters, VM-PT cryocooler can be designed in several configurations. This paper presents a numerical investigation on three typical types of VM-PT cryocoolers, which are gas-coupling mode with room temperature phase shifter (GCRP), gas-coupling mode with cold phase shifter (GCCP) and thermal-coupling mode with cold phase shifter (TCCP). Firstly, three configurations are optimized on operating parameters to attain lower no-load temperature. Then, based on the simulation results, distributions of acoustic power, enthalpy flow, pressure wave, and volume flow rate are presented and discussed to better understand the energy flow characteristics and coupling mechanism. Meanwhile, analyses of phase relationship and exergy loss are also performed. Furthermore, a GCCP experimental system with optimal comprehensive performance among three configurations was built and tested. Experimental results showed good consistency with the simulations. Finally, a no-load temperature of 3.39 K and cooling power of 9.75 mW at 4.2 K were obtained with a pressure ratio of 1.7, operating frequency of 1.22 Hz and mean pressure of 1.5 MPa.
Evaluation of punching shear strength of flat slabs supported on rectangular columns
NASA Astrophysics Data System (ADS)
Filatov, Valery
2018-03-01
The article presents the methodology and results of an analytical study of structural parameters influence on the value of punching force for the joint of columns and flat reinforced concrete slab. This design solution is typical for monolithic reinforced concrete girderless frames, which have a wide application in the construction of high-rise buildings. As the results of earlier studies show the punching shear strength of slabs at rectangular columns can be lower than at square columns with a similar length of the control perimeter. The influence of two structural parameters on the punching strength of the plate is investigated - the ratio of the side of the column cross-section to the effective depth of slab C/d and the ratio of the sides of the rectangular column Cmax/Cmin. According to the results of the study, graphs of reduction the control perimeter depending on the structural parameters are presented for columns square and rectangular cross-sections. Comparison of results obtained by proposed approach and MC2010 simplified method are shown, that proposed approach gives a more conservative estimate of the influence of the structural parameters. A significant influence of the considered structural parameters on punching shear strength of reinforced concrete slabs is confirmed by the results of experimental studies. The results of the study confirm the necessity of taking into account the considered structural parameters when calculating the punching shear strength of flat reinforced concrete slabs and further development of code design methods.
Systematic modelling and design evaluation of unperturbed tumour dynamics in xenografts.
Parra Guillen, Zinnia P Patricia; Mangas Sanjuan, Victor; Garcia-Cremades, Maria; Troconiz, Inaki F; Mo, Gary; Pitou, Celine; Iversen, Philip W; Wallin, Johan E
2018-04-24
Xenograft mice are largely used to evaluate the efficacy of oncological drugs during preclinical phases of drug discovery and development. Mathematical models provide a useful tool to quantitatively characterise tumour growth dynamics and also optimise upcoming experiments. To the best of our knowledge, this is the first report where unperturbed growth of a large set of tumour cell lines (n=28) has been systematically analysed using the model proposed by Simeoni in the context of non-linear mixed effect (NLME). Exponential growth was identified as the governing mechanism in the majority of the cell lines, with constant rate values ranging from 0.0204 to 0.203 day -1 No common patterns could be observed across tumour types, highlighting the importance of combining information from different cell lines when evaluating drug activity. Overall, typical model parameters were precisely estimated using designs where tumour size measurements were taken every two days. Moreover, reducing the number of measurement to twice per week, or even once per week for cell lines with low growth rates, showed little impact on parameter precision. However, in order to accurately characterise parameter variability (i.e. relative standard errors below 50%), a sample size of at least 50 mice is needed. This work illustrates the feasibility to systematically apply NLME models to characterise tumour growth in drug discovery and development, and constitutes a valuable source of data to optimise experimental designs by providing an a priori sampling window and minimising the number of samples required. The American Society for Pharmacology and Experimental Therapeutics.
Adaptive nodes enrich nonlinear cooperative learning beyond traditional adaptation by links.
Sardi, Shira; Vardi, Roni; Goldental, Amir; Sheinin, Anton; Uzan, Herut; Kanter, Ido
2018-03-23
Physical models typically assume time-independent interactions, whereas neural networks and machine learning incorporate interactions that function as adjustable parameters. Here we demonstrate a new type of abundant cooperative nonlinear dynamics where learning is attributed solely to the nodes, instead of the network links which their number is significantly larger. The nodal, neuronal, fast adaptation follows its relative anisotropic (dendritic) input timings, as indicated experimentally, similarly to the slow learning mechanism currently attributed to the links, synapses. It represents a non-local learning rule, where effectively many incoming links to a node concurrently undergo the same adaptation. The network dynamics is now counterintuitively governed by the weak links, which previously were assumed to be insignificant. This cooperative nonlinear dynamic adaptation presents a self-controlled mechanism to prevent divergence or vanishing of the learning parameters, as opposed to learning by links, and also supports self-oscillations of the effective learning parameters. It hints on a hierarchical computational complexity of nodes, following their number of anisotropic inputs and opens new horizons for advanced deep learning algorithms and artificial intelligence based applications, as well as a new mechanism for enhanced and fast learning by neural networks.
Compact continuum brain model for human electroencephalogram
NASA Astrophysics Data System (ADS)
Kim, J. W.; Shin, H.-B.; Robinson, P. A.
2007-12-01
A low-dimensional, compact brain model has recently been developed based on physiologically based mean-field continuum formulation of electric activity of the brain. The essential feature of the new compact model is a second order time-delayed differential equation that has physiologically plausible terms, such as rapid corticocortical feedback and delayed feedback via extracortical pathways. Due to its compact form, the model facilitates insight into complex brain dynamics via standard linear and nonlinear techniques. The model successfully reproduces many features of previous models and experiments. For example, experimentally observed typical rhythms of electroencephalogram (EEG) signals are reproduced in a physiologically plausible parameter region. In the nonlinear regime, onsets of seizures, which often develop into limit cycles, are illustrated by modulating model parameters. It is also shown that a hysteresis can occur when the system has multiple attractors. As a further illustration of this approach, power spectra of the model are fitted to those of sleep EEGs of two subjects (one with apnea, the other with narcolepsy). The model parameters obtained from the fittings show good matches with previous literature. Our results suggest that the compact model can provide a theoretical basis for analyzing complex EEG signals.
Surface deformation during an action potential in pearled cells
NASA Astrophysics Data System (ADS)
Mussel, Matan; Fillafer, Christian; Ben-Porath, Gal; Schneider, Matthias F.
2017-11-01
Electric pulses in biological cells (action potentials) have been reported to be accompanied by a propagating cell-surface deformation with a nanoscale amplitude. Typically, this cell surface is covered by external layers of polymer material (extracellular matrix, cell wall material, etc.). It was recently demonstrated in excitable plant cells (Chara braunii) that the rigid external layer (cell wall) hinders the underlying deformation. When the cell membrane was separated from the cell wall by osmosis, a mechanical deformation, in the micrometer range, was observed upon excitation of the cell. The underlying mechanism of this mechanical pulse has, to date, remained elusive. Herein we report that Chara cells can undergo a pearling instability, and when the pearled fragments were excited even larger and more regular cell shape changes were observed (˜10 -100 μ m in amplitude). These transient cellular deformations were captured by a curvature model that is based on three parameters: surface tension, bending rigidity, and pressure difference across the surface. In this paper these parameters are extracted by curve-fitting to the experimental cellular shapes at rest and during excitation. This is a necessary step to identify the mechanical parameters that change during an action potential.
Detection of damage in welded structure using experimental modal data
NASA Astrophysics Data System (ADS)
Abu Husain, N.; Ouyang, H.
2011-07-01
A typical automotive structure could contain thousands of spot weld joints that contribute significantly to the vehicle's structural stiffness and dynamic characteristics. However, some of these joints may be imperfect or even absent during the manufacturing process and they are also highly susceptible to damage due to operational and environmental conditions during the vehicle lifetime. Therefore, early detection and estimation of damage are important so necessary actions can be taken to avoid further problems. Changes in physical parameters due to existence of damage in a structure often leads to alteration of vibration modes; thus demonstrating the dependency between the vibration characteristics and the physical properties of structures. A sensitivity-based model updating method, performed using a combination of MATLAB and NASTRAN, has been selected for the purpose of this work. The updating procedure is regarded as parameter identification which aims to bring the numerical prediction to be as closely as possible to the measured natural frequencies and mode shapes data of the damaged structure in order to identify the damage parameters (characterised by the reductions in the Young's modulus of the weld patches to indicate the loss of material/stiffness at the damage region).
Stochastic dosimetry model for radon progeny in the rat lung.
Winkler-HeiI, R; Hofmann, W; Hussain, M
2014-07-01
The stochastic dosimetry model presented here considers the distinctly asymmetric, stochastic branching pattern reported in morphometric measurements. This monopodial structure suggests that an airway diameter is a more appropriate morphometric parameter to classify bronchial dose distributions for inhaled radon progeny than the commonly assigned airway generation numbers. Bronchial doses were calculated for the typical exposure conditions reported for the Pacific Northwest National Laboratory rat inhalation studies, yielding an average bronchial dose of 7.75 mGy WLM(-1). If plotted as functions of airway generations, the resulting dose distributions are highest in the central bronchial airways, while significantly decreasing towards peripheral generations. However, if plotted as functions of airway diameters, doses are much more uniformly distributed among bronchial airways. The comparison between rat and human lungs indicates that dose conversion coefficients for the rat lung are higher than the corresponding values for the human lung by a factor of 1.34 for the experimental PNNL exposure conditions, and of 1.25 for typical human indoor conditions. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.
Target discrimination strategies in optics detection
NASA Astrophysics Data System (ADS)
Sjöqvist, Lars; Allard, Lars; Henriksson, Markus; Jonsson, Per; Pettersson, Magnus
2013-10-01
Detection and localisation of optical assemblies used for weapon guidance or sniper rifle scopes has attracted interest for security and military applications. Typically a laser system is used to interrogate a scene of interest and the retro-reflected radiation is detected. Different system approaches for area coverage can be realised ranging from flood illumination to step-and-stare or continuous scanning schemes. Independently of the chosen approach target discrimination is a crucial issue, particularly if a complex scene such as in an urban environment and autonomous operation is considered. In this work target discrimination strategies in optics detection are discussed. Typical parameters affecting the reflected laser radiation from the target are the wavelength, polarisation properties, temporal effects and the range resolution. Knowledge about the target characteristics is important to predict the target discrimination capability. Two different systems were used to investigate polarisation properties and range resolution information from targets including e.g. road signs, optical reflexes, rifle sights and optical references. The experimental results and implications on target discrimination will be discussed. If autonomous operation is required target discrimination becomes critical in order to reduce the number of false alarms.
Optimization of diode-pumped doubly QML laser with neodymium-doped vanadate crystals at 1.34 μm
NASA Astrophysics Data System (ADS)
Zhang, Gang; Jiao, Zhiyong
2018-05-01
We present a theoretical model for a diode-pumped, 1.34 μm V3+:YAG laser that is equipped with an acoustic-optic modulator. The model includes the loss introduced by the acoustic-optic modulator combined with the physical properties of the laser resonator, the neodymium-doped vanadate crystals and the output coupler. The parameters are adjusted within a reasonable range to optimize the pulse output characteristics. A typical Q-switched and mode-locked Nd:Lu0.15Y0.85VO4 laser at 1.34 μm with acoustic-optic modulator and V3+:YAG is set up, and the experimental output characteristics are consistent with the theoretical simulation results.
NASA Astrophysics Data System (ADS)
Song, Jinghui; Yuan, Hui; Xia, Yunfeng; Kan, Weimin; Deng, Xiaowen; Liu, Shi; Liang, Wanlong; Deng, Jianhua
2018-03-01
This paper introduces the working principle and system constitution of the linear Fresnel solar lithium bromide absorption refrigeration cycle, and elaborates several typical structures of absorption refrigeration cycle, including single-effect, two-stage cycle and double-effect lithium bromide absorption refrigeration cycle A 1.n effect absorption chiller system based on the best parameters was introduced and applied to a linear Fresnel solar absorption chiller system. Through the field refrigerator performance test, the results show: Based on this heat cycle design and processing 1.n lithium bromide absorption refrigeration power up to 35.2KW, It can meet the theoretical expectations and has good flexibility and reliability, provides guidance for the use of solar thermal energy.
Three-body Coulomb problem probed by mapping the Bethe surface in ionizing ion-atom collisions.
Moshammer, R; Perumal, A; Schulz, M; Rodríguez, V D; Kollmus, H; Mann, R; Hagmann, S; Ullrich, J
2001-11-26
The three-body Coulomb problem has been explored in kinematically complete experiments on single ionization of helium by 100 MeV/u C(6+) and 3.6 MeV/u Au(53+) impact. Low-energy electron emission ( E(e)<150 eV) as a function of the projectile deflection theta(p) (momentum transfer), i.e., the Bethe surface [15], has been mapped with Delta theta(p)+/-25 nanoradian resolution at extremely large perturbations ( 3.6 MeV/u Au(53+)) where single ionization occurs at impact parameters of typically 10 times the He K-shell radius. The experimental data are not in agreement with state-of-the-art continuum distorted wave-eikonal initial state theory.
A vibration model for centrifugal contactors
NASA Astrophysics Data System (ADS)
Leonard, R. A.; Wasserman, M. O.; Wygmans, D. G.
1992-11-01
Using the transfer matrix method, we created the Excel worksheet 'Beam' for analyzing vibrations in centrifugal contactors. With this worksheet, a user can calculate the first natural frequency of the motor/rotor system for a centrifugal contactor. We determined a typical value for the bearing stiffness (k(sub B)) of a motor after measuring the k(sub B) value for three different motors. The k(sub B) value is an important parameter in this model, but it is not normally available for motors. The assumptions that we made in creating the Beam worksheet were verified by comparing the calculated results with those from a VAX computer program, BEAM IV. The Beam worksheet was applied to several contactor designs for which we have experimental data and found to work well.
Mastalerz, Maria; Gurba, L.W.
2001-01-01
This paper discusses nitrogen determination with the Cameca SX50 electron microprobe using PCO as an analyzing crystal. A set of conditions using differing accelerating voltages, beam currents, beam sizes, and counting times were tested to determine parameters that would give the most reliable nitrogen determination. The results suggest that, for the instrumentation used, 10 kV, current 20 nA, and a counting time of 20 s provides the most reliable nitrogen determination, with a much lower detection limit than the typical concentration of this element in coal. The study demonstrates that the electron microprobe technique can be used to determine the nitrogen content of coal macerals successfully and accurately. ?? 2001 Elsevier Science B.V. All rights reserved.
Electron-neutrino charged-current quasi-elastic scattering in MINERvA
NASA Astrophysics Data System (ADS)
Wolcott, Jeremy
2014-03-01
The electron-neutrino charged-current quasi-elastic (CCQE) cross-section on nuclei is an important input parameter to appearance-type neutrino oscillation experiments. Current experiments typically work from the muon neutrino CCQE cross-section and apply corrections from theoretical arguments to obtain a prediction for the electron neutrino CCQE cross-section, but to date there has been no precise experimental verification of these estimates at an energy scale appropriate to such experiments. We present the current status of a direct measurement of the electron neutrino CCQE differential cross-section as a function of the squared four-momentum transfer to the nucleus, Q2, in MINERvA. This talk will discuss event selection, background constraints, and the flux prediction used in the calculation.
NASA Astrophysics Data System (ADS)
Jiao, Sicheng; Zhang, Chengyan; Liu, Guancheng; Lu, Jiping; Tang, Shuiyuan
2017-08-01
A series of turning experiments have been carried out to study the effect of different cutting speed, feed rate and pre-tightening torque on residual stress distribution during turning of weak stiffness revolving parts. Surface residual stress and the peak residual compressive stress are selected from the typical residual stress distribution profile. The residual stress by turning was measured by X-ray diffraction method. In order to get the distribution of residual stress along depth direction, the specimens need to be etched layer by layer. From this investigation, it can be concluded that it is practicable to control the distribution of residual stress by changing the pre-tightening torque and cutting parameters during turning of weak stiffness revolving parts.
NASA Technical Reports Server (NTRS)
Stevens, N. J.
1979-01-01
Cases where the charged-particle environment acts on the spacecraft (e.g., spacecraft charging phenomena) and cases where a system on the spacecraft causes the interaction (e.g., high voltage space power systems) are considered. Both categories were studied in ground simulation facilities to understand the processes involved and to measure the pertinent parameters. Computer simulations are based on the NASA Charging Analyzer Program (NASCAP) code. Analytical models are developed in this code and verified against the experimental data. Extrapolation from the small test samples to space conditions are made with this code. Typical results from laboratory and computer simulations are presented for both types of interactions. Extrapolations from these simulations to performance in space environments are discussed.
Theoretical and experimental studies of reentry plasmas
NASA Technical Reports Server (NTRS)
Dunn, M. G.; Kang, S.
1973-01-01
A viscous shock-layer analysis was developed and used to calculate nonequilibrium-flow species distributions in the plasma layer of the RAM vehicle. The theoretical electron-density results obtained are in good agreement with those measured in flight. A circular-aperture flush-mounted antenna was used to obtain a comparison between theoretical and experimental antenna admittance in the presence of ionized boundary layers of low collision frequency. The electron-temperature and electron-density distributions in the boundary layer were independently measured. The antenna admittance was measured using a four-probe microwave reflectometer and these measured values were found to be in good agreement with those predicted. Measurements were also performed with another type of circular-aperture antenna and good agreement was obtained between the calculations and the experimental results. A theoretical analysis has been completed which permits calculation of the nonequilibrium, viscous shock-layer flow field for a sphere-cone body. Results are presented for two different bodies at several different altitudes illustrating the influences of bluntness and chemical nonequilibrium on several gas dynamic parameters of interest. Plane-wave transmission coefficients were calculated for an approximate space-shuttle body using a typical trajectory.
NASA Astrophysics Data System (ADS)
Tabourot, Laurent; Charleux, Ludovic; Balland, Pascale; Sène, Ndèye Awa; Andreasson, Eskil
2018-05-01
This paper is based on the hypothesis that introducing distribution of mechanical properties is beneficial for modeling all kinds of mechanical behavior, even of ordinary metallic materials. To bring proof of its admissibility, it has to be first shown that modeling based on this assertion is able to efficiently describe standard mechanical behavior of materials. Searching for typical study case, it has been assessed that at a low scale, yield stresses could be strongly distributed in ultrathin aluminum foils used in packaging industry, offering opportunities to identifying their distribution and showing its role on the mechanical properties. Considering initially reduced modeling allow to establish a valuable connection between the hardening curve and the distribution of local yield stresses. This serves for finding initial value of distribution parameters in a more sophisticated identification procedure. With finally limited number of representative classes of local yield stresses, concretely 3 is enough, it is shown that a 3D finite element simulation involving limited numbers of elements returns realistic behavior of an ultrathin aluminum foil exerted to tensile test, in reference to experimental results. This gives way to large possibilities in modeling in order to give back complex experimental evidence.
Elsässer, Thilo; Brons, Stephan; Psonka, Katarzyna; Scholz, Michael; Gudowska-Nowak, Ewa; Taucher-Scholz, Gisela
2008-06-01
The investigation of fragment length distributions of plasmid DNA gives insight into the influence of localized energy distribution on the induction of DNA damage, particularly the clustering of double-strand breaks. We present an approach that determines the fragment length distributions of plasmid DNA after heavy-ion irradiation by using the Local Effect Model. We find a good agreement of our simulations with experimental fragment distributions derived from atomic force microscopy (AFM) studies by including experimental constraints typical for AFM. Our calculations reveal that by comparing the fragmentation in terms of fluence, we can uniquely distinguish the effect of different radiation qualities. For very high-LET irradiation using nickel or uranium ions, no difference between their fragment distributions can be expected for the same dose level. However, for carbon ions with an intermediate LET, the fragmentation pattern differs from the distribution for very high-LET particles. The results of the model calculations can be used to determine the optimal experimental parameters for a demonstration of the influence of track structure on primary radiation damage. Additionally, we compare the results of our model for two different plasmid geometries.
Song, Boqi; Peng, Limin; Fu, Feng; Liu, Meihong; Zhang, Houjiang
2016-01-01
Perforated wooden panels are typically utilized as a resonant sound absorbing material in indoor noise control. In this paper, the absorption properties of wooden panels perforated with tiny holes of 1–3 mm diameter were studied both experimentally and theoretically. The Maa-MPP (micro perforated panels) model and the Maa-Flex model were applied to predict the absorption regularities of finely perforated wooden panels. A relative impedance comparison and full-factorial experiments were carried out to verify the feasibility of the theoretical models. The results showed that the Maa-Flex model obtained good agreement with measured results. Control experiments and measurements of dynamic mechanical properties were carried out to investigate the influence of the wood characteristics. In this study, absorption properties were enhanced by sound-induced vibration. The relationship between the dynamic mechanical properties and the panel mass-spring vibration absorption was revealed. While the absorption effects of wood porous structure were not found, they were demonstrated theoretically by using acoustic wave propagation in a simplified circular pipe with a suddenly changed cross-section model. This work provides experimental and theoretical guidance for perforation parameter design. PMID:28774063
Garofalakis, I; Tsiros, I; Frangoudakis, A; Chronopoulos, K; Flouri, F
2006-01-01
This paper deals with an experimental study of various techniques that have been applied for soil disinfestation purposes under greenhouse conditions. Various meteorological parameters and soil temperatures were measured for four different experimental soil segments (three associated with different disinfestation techniques and one as a reference) at depths varying between 0-1 m and with a time interval of 5 min in a greenhouse located in the Agricultural University of Athens Campus, Greece. Results showed that plastic polyethylene films such as covers, metallic conductors or a combination of both were able to enhance heat transfer and temperature increase in greenhouse soil. For typical disinfestation conditions, the depth-averaged temperature values for plastic covers, metallic conductors, and the combination of both were found to be higher than those for the reference of about 5 degrees C, 12 degrees C and 15 micro C, respectively. Moreover, the remained population percentages 50 days after the initiation of the experiment were found to be 19.3%, 25.3%, 37.3% Kcat 94% of the initial population, for the combination of metallic conductors and plastic covers, metallic conductors, plastic cover, and for the reference, respectively.
NASA Astrophysics Data System (ADS)
Ocaña, J. L.; Morales, M.; Porro, J. A.; Iordachescu, D.; Díaz, M.; Ruiz de Lara, L.; Correa, C.
2011-05-01
Profiting by the increasing availability of laser sources delivering intensities above 109 W/cm2 with pulse energies in the range of several Joules and pulse widths in the range of nanoseconds, laser shock processing (LSP) is being consolidating as an effective technology for the improvement of surface mechanical and corrosion resistance properties of metals and is being developed as a practical process amenable to production engineering. The main acknowledged advantage of the laser shock processing technique consists on its capability of inducing a relatively deep compression residual stresses field into metallic alloy pieces allowing an improved mechanical behaviour, explicitly, the life improvement of the treated specimens against wear, crack growth and stress corrosion cracking. Following a short description of the theoretical/computational and experimental methods developed by the authors for the predictive assessment and experimental implementation of LSP treatments, experimental results on the residual stress profiles and associated surface properties modification successfully reached in typical materials (specifically Al and Ti alloys) under different LSP irradiation conditions are presented. In particular, the analysis of the residual stress profiles obtained under different irradiation parameters and the evaluation of the corresponding induced surface properties as roughness and wear resistance are presented.
Experimental approach for thermal parameters estimation during glass forming process
NASA Astrophysics Data System (ADS)
Abdulhay, B.; Bourouga, B.; Alzetto, F.; Challita, C.
2016-10-01
In this paper, an experimental device designed and developedto estimate thermal conditions at the Glass / piston contact interface is presented. This deviceis made of two parts: the upper part contains the piston made of metal and a heating device to raise the temperature of the piston up to 500 °C. The lower part is composed of a lead crucible and a glass sample. The assembly is provided with a heating system, an induction furnace of 6 kW for heating the glass up to 950 °C.The developed experimental procedure has permitted in a previous published study to estimate the Thermal Contact ResistanceTCR using the inverse technique developed by Beck [1]. The semi-transparent character of the glass has been taken into account by an additional radiative heat flux and an equivalent thermal conductivity. After the set-up tests, reproducibility experiments for a specific contact pressure have been carried outwith a maximum dispersion that doesn't exceed 6%. Then, experiments under different conditions for a specific glass forming process regarding the application (Packaging, Buildings and Automobile) were carried out. The objective is to determine, experimentallyfor each application,the typical conditions capable to minimize the glass temperature loss during the glass forming process.
Fault Lubrication and Earthquake Propagation in Thermally Unstable Rocks
NASA Astrophysics Data System (ADS)
de Paola, Nicola; Hirose, Takehiro; Mitchell, Tom; di Toro, Giulio; Viti, Cecilia; Shimamoto, Toshiko
2010-05-01
During earthquake propagation in thermally unstable rocks, the frictional heat generated can induce thermal reactions which lead to chemical and physical changes in the slip zone. We performed laboratory friction experiments on thermally unstable minerals (gypsum, dolomite and calcite) at about 1 m/s slip velocities, more than 1 m displacements and calculated temperature rise above 500 C degrees. These conditions are typical during the propagation of large earthquakes. The main findings of our experimental work are: 1) Dramatic fault weakening is characterized by a dynamic frictional strength drop up to 90% of the initial static value in the Byerlee's range. 2) Seismic source parameters, calculated from our experimental results, match those obtained by modelling of seismological data from the 1997 Cofliorito earthquake nucleated in carbonate rocks in Italy (i.e. same rocks used in the friction experiments). Fault lubrication observed during the experiments is controlled by the superposition of multiple, thermally-activated, slip weakening mechanisms (e.g., flash heating, thermal pressurization and nanoparticle lubrication). The integration of mechanical and CO2 emission data, temperature rise calculations and XRPD analyses suggests that flash heating is not the main dynamic slip weakening process. This process was likely inhibited very soon (t < 1s) for displacements d < 0.20 m, when intense grain size reduction by both cataclastic and chemical/thermal processes took place. Conversely, most of the dynamic weakening observed was controlled by thermal pressurization and nanoparticle lubrication processes. The dynamic shear strength of experimental faults was reduced when fluids (CO2, H2O) were trapped and pressurized within the slip zone, in accord with the effective normal stress principle. The fluids were not initially present in the slip zone, but were released by decarbonation (dolomite and Mg-rich calcite) and dehydration (gypsum) reactions, both activated by frictional heating during seismic slip. The dynamic weakening effects of nanoparticles (e.g. powder lubrication) are still unclear due to the poorly understood mechanical properties of nanoparticles at high velocities and temperatures, typical of seismic slip. The experimental results improve our understanding of the controls exerted on the dynamic frictional strength of faults by the coseismic operation of chemical (mineral decomposition) and physical (grain size reduction, fluids release and pressurization) processes. The estimation of this parameter is out of the range of seismological studies, although it controls the magnitude of the stress drop, the seismic fault heat flow and the relative partitioning of the earthquake energy budget, which are all controversial and still debated issues in the scientific community.
Fault Lubrication and Earthquake Propagation in Thermally Unstable Rocks
NASA Astrophysics Data System (ADS)
de Paola, N.; Hirose, T.; Mitchell, T. M.; di Toro, G.; Viti, C.; Shimamoto, T.
2009-12-01
During earthquake propagation in thermally unstable rocks, the frictional heat generated can induce thermal reactions which lead to chemical and physical changes in the slip zone. We performed laboratory friction experiments on thermally unstable minerals (gypsum, dolomite and calcite) at about 1 m/s slip velocities, more than 1 m displacements and calculated temperature rise above 500 C degrees. These conditions are typical during the propagation of large earthquakes. The main findings of our experimental work are: 1) Dramatic fault weakening is characterized by a dynamic frictional strength drop up to 90% of the initial static value in the Byerlee’s range. 2) Seismic source parameters, calculated from our experimental results, match those obtained by modelling of seismological data from the 1997 Cofliorito earthquake nucleated in carbonate rocks in Italy (i.e. same rocks used in the friction experiments). Fault lubrication observed during the experiments is controlled by the superposition of multiple, thermally-activated, slip weakening mechanisms (e.g., flash heating, thermal pressurization and nanoparticle lubrication). The integration of mechanical and CO2 emission data, temperature rise calculations and XRPD analyses suggests that flash heating is not the main dynamic slip weakening process. This process was likely inhibited very soon (t < 1s) for displacements d < 0.20 m, when intense grain size reduction by both cataclastic and chemical/thermal processes took place. Conversely, most of the dynamic weakening observed was controlled by thermal pressurization and nanoparticle lubrication processes. The dynamic shear strength of experimental faults was reduced when fluids (CO2, H2O) were trapped and pressurized within the slip zone, in accord with the effective normal stress principle. The fluids were not initially present in the slip zone, but were released by decarbonation (dolomite and Mg-rich calcite) and dehydration (gypsum) reactions, both activated by frictional heating during seismic slip. The dynamic weakening effects of nanoparticles (e.g. powder lubrication) are still unclear due to the poorly understood mechanical properties of nanoparticles at high velocities and temperatures, typical of seismic slip. The experimental results improve our understanding of the controls exerted on the dynamic frictional strength of faults by the coseismic operation of chemical (mineral decomposition) and physical (grain size reduction, fluids release and pressurization) processes. The estimation of this parameter is out of the range of seismological studies, although it controls the magnitude of the stress drop, the seismic fault heat flow and the relative partitioning of the earthquake energy budget, which are all controversial and still debated issues in the scientific community.
Yonai, Shunsuke; Matsufuji, Naruhiro; Akahane, Keiichi
2018-04-23
The aim of this work was to estimate typical dose equivalents to out-of-field organs during carbon-ion radiotherapy (CIRT) with a passive beam for prostate cancer treatment. Additionally, sensitivity analyses of organ doses for various beam parameters and phantom sizes were performed. Because the CIRT out-of-field dose depends on the beam parameters, the typical values of those parameters were determined from statistical data on the target properties of patients who received CIRT at the Heavy-Ion Medical Accelerator in Chiba (HIMAC). Using these typical beam-parameter values, out-of-field organ dose equivalents during CIRT for typical prostate treatment were estimated by Monte Carlo simulations using the Particle and Heavy-Ion Transport Code System (PHITS) and the ICRP reference phantom. The results showed that the dose decreased with distance from the target, ranging from 116 mSv in the testes to 7 mSv in the brain. The organ dose equivalents per treatment dose were lower than those either in 6-MV intensity-modulated radiotherapy or in brachytherapy with an Ir-192 source for organs within 40 cm of the target. Sensitivity analyses established that the differences from typical values were within ∼30% for all organs, except the sigmoid colon. The typical out-of-field organ dose equivalents during passive-beam CIRT were shown. The low sensitivity of the dose equivalent in organs farther than 20 cm from the target indicated that individual dose assessments required for retrospective epidemiological studies may be limited to organs around the target in cases of passive-beam CIRT for prostate cancer. Copyright © 2018 Associazione Italiana di Fisica Medica. Published by Elsevier Ltd. All rights reserved.
Elucidation of Iron Gettering Mechanisms in Boron-Implanted Silicon Solar Cells
Laine, Hannu S.; Vahanissi, Ville; Liu, Zhengjun; ...
2017-12-15
To facilitate cost-effective manufacturing of boron-implanted silicon solar cells as an alternative to BBr 3 diffusion, we performed a quantitative test of the gettering induced by solar-typical boron-implants with the potential for low saturation current density emitters (< 50 fA/cm 2). We show that depending on the contamination level and the gettering anneal chosen, such boron-implanted emitters can induce more than a 99.9% reduction in bulk iron point defect concentration. The iron point defect results as well as synchrotron-based Nano-X-ray-fluorescence investigations of iron precipitates formed in the implanted layer imply that, with the chosen experimental parameters, iron precipitation is themore » dominant gettering mechanism, with segregation-based gettering playing a smaller role. We reproduce the measured iron point defect and precipitate distributions via kinetics modeling. First, we simulate the structural defect distribution created by the implantation process, and then we model these structural defects as heterogeneous precipitation sites for iron. Unlike previous theoretical work on gettering via boron- or phosphorus-implantation, our model is free of adjustable simulation parameters. The close agreement between the model and experimental results indicates that the model successfully captures the necessary physics to describe the iron gettering mechanisms operating in boron-implanted silicon. Furthermore, this modeling capability allows high-performance, cost-effective implanted silicon solar cells to be designed.« less
NASA Astrophysics Data System (ADS)
Sun, Jiu-Xun; Cai, Ling-Cang; Wu, Qiang; Jin, Ke
2013-09-01
Based on the expansion and extension of the virial equation of state (EOS) of hard-sphere fluids solved by the Percus-Yevick integration equation, a universal cubic (UC) EOS is developed. The UC EOS is applied to model hard-sphere and Lennard-Jones (LJ) fluids, simple Ar and N2 liquids at low temperatures, and supercritical Ar and N2 fluids at high temperatures, as well as ten solids, respectively. The three parameters are determined for the hard-sphere fluid by fitting molecular dynamics (MD) simulation data of the third to eighth virial coefficients in the literature; for other fluids by fitting isothermal compression data; and for solids by using the Einstein model. The results show that the UC EOS gives better results than the Carnahan-Starling EOS for compressibility of hard-sphere fluids. The Helmholtz free energy and internal energy for LJ fluids are predicted and compared with MD simulation data. The calculated pressures for simple Ar and N2 liquids are compared with experimental data. The agreement is fairly good. Eight three-parameter EOSs are applied to describe isothermals of ten typical solids. It is shown that the UC EOS gives the best precision with correct behavior at high-pressure limitation. The UC EOS considering thermal effects is used to analytically evaluate the isobaric thermal expansivity and isothermal compressibility coefficients. The results are in good agreement with experimental data.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kaczmarski, Krzysztof; Guiochon, Georges A
The adsorption isotherms of selected compounds are our main source of information on the mechanisms of adsorption processes. Thus, the selection of the methods used to determine adsorption isotherm data and to evaluate the errors made is critical. Three chromatographic methods were evaluated, frontal analysis (FA), frontal analysis by characteristic point (FACP), and the pulse or perturbation method (PM), and their accuracies were compared. Using the equilibrium-dispersive (ED) model of chromatography, breakthrough curves of single components were generated corresponding to three different adsorption isotherm models: the Langmuir, the bi-Langmuir, and the Moreau isotherms. For each breakthrough curve, the best conventionalmore » procedures of each method (FA, FACP, PM) were used to calculate the corresponding data point, using typical values of the parameters of each isotherm model, for four different values of the column efficiency (N = 500, 1000, 2000, and 10,000). Then, the data points were fitted to each isotherm model and the corresponding isotherm parameters were compared to those of the initial isotherm model. When isotherm data are derived with a chromatographic method, they may suffer from two types of errors: (1) the errors made in deriving the experimental data points from the chromatographic records; (2) the errors made in selecting an incorrect isotherm model and fitting to it the experimental data. Both errors decrease significantly with increasing column efficiency with FA and FACP, but not with PM.« less
NASA Astrophysics Data System (ADS)
Merrem, A.; Bartzsch, S.; Laissue, J.; Oelfke, U.
2017-05-01
Microbeam Radiation Therapy is an innovative pre-clinical strategy which uses arrays of parallel, tens of micrometres wide kilo-voltage photon beams to treat tumours. These x-ray beams are typically generated on a synchrotron source. It was shown that these beam geometries allow exceptional normal tissue sparing from radiation damage while still being effective in tumour ablation. A final biological explanation for this enhanced therapeutic ratio has still not been found, some experimental data support an important role of the vasculature. In this work, the effect of microbeams on a normal microvascular network of the cerebral cortex was assessed in computer simulations and compared to the effect of homogeneous, seamless exposures at equal energy absorption. The anatomy of a cerebral microvascular network and the inflicted radiation damage were simulated to closely mimic experimental data using a novel probabilistic model of radiation damage to blood vessels. It was found that the spatial dose fractionation by microbeam arrays significantly decreased the vascular damage. The higher the peak-to-valley dose ratio, the more pronounced the sparing effect. Simulations of the radiation damage as a function of morphological parameters of the vascular network demonstrated that the distribution of blood vessel radii is a key parameter determining both the overall radiation damage of the vasculature and the dose-dependent differential effect of microbeam irradiation.
Elucidation of Iron Gettering Mechanisms in Boron-Implanted Silicon Solar Cells
DOE Office of Scientific and Technical Information (OSTI.GOV)
Laine, Hannu S.; Vahanissi, Ville; Liu, Zhengjun
To facilitate cost-effective manufacturing of boron-implanted silicon solar cells as an alternative to BBr 3 diffusion, we performed a quantitative test of the gettering induced by solar-typical boron-implants with the potential for low saturation current density emitters (< 50 fA/cm 2). We show that depending on the contamination level and the gettering anneal chosen, such boron-implanted emitters can induce more than a 99.9% reduction in bulk iron point defect concentration. The iron point defect results as well as synchrotron-based Nano-X-ray-fluorescence investigations of iron precipitates formed in the implanted layer imply that, with the chosen experimental parameters, iron precipitation is themore » dominant gettering mechanism, with segregation-based gettering playing a smaller role. We reproduce the measured iron point defect and precipitate distributions via kinetics modeling. First, we simulate the structural defect distribution created by the implantation process, and then we model these structural defects as heterogeneous precipitation sites for iron. Unlike previous theoretical work on gettering via boron- or phosphorus-implantation, our model is free of adjustable simulation parameters. The close agreement between the model and experimental results indicates that the model successfully captures the necessary physics to describe the iron gettering mechanisms operating in boron-implanted silicon. Furthermore, this modeling capability allows high-performance, cost-effective implanted silicon solar cells to be designed.« less
Branching instability in expanding bacterial colonies.
Giverso, Chiara; Verani, Marco; Ciarletta, Pasquale
2015-03-06
Self-organization in developing living organisms relies on the capability of cells to duplicate and perform a collective motion inside the surrounding environment. Chemical and mechanical interactions coordinate such a cooperative behaviour, driving the dynamical evolution of the macroscopic system. In this work, we perform an analytical and computational analysis to study pattern formation during the spreading of an initially circular bacterial colony on a Petri dish. The continuous mathematical model addresses the growth and the chemotactic migration of the living monolayer, together with the diffusion and consumption of nutrients in the agar. The governing equations contain four dimensionless parameters, accounting for the interplay among the chemotactic response, the bacteria-substrate interaction and the experimental geometry. The spreading colony is found to be always linearly unstable to perturbations of the interface, whereas branching instability arises in finite-element numerical simulations. The typical length scales of such fingers, which align in the radial direction and later undergo further branching, are controlled by the size parameters of the problem, whereas the emergence of branching is favoured if the diffusion is dominant on the chemotaxis. The model is able to predict the experimental morphologies, confirming that compact (resp. branched) patterns arise for fast (resp. slow) expanding colonies. Such results, while providing new insights into pattern selection in bacterial colonies, may finally have important applications for designing controlled patterns. © 2015 The Author(s) Published by the Royal Society. All rights reserved.
Magnetization transfer proportion: a simplified measure of dose response for polymer gel dosimetry.
Whitney, Heather M; Gochberg, Daniel F; Gore, John C
2008-12-21
The response to radiation of polymer gel dosimeters has most often been described by measuring the nuclear magnetic resonance transverse relaxation rate as a function of dose. This approach is highly dependent upon the choice of experimental parameters, such as the echo spacing time for Carr-Purcell-Meiboom-Gill-type pulse sequences, and is difficult to optimize in imaging applications where a range of doses are applied to a single gel, as is typical for practical uses of polymer gel dosimetry. Moreover, errors in computing dose can arise when there are substantial variations in the radiofrequency (B1) field or resonant frequency, as may occur for large samples. Here we consider the advantages of using magnetization transfer imaging as an alternative approach and propose the use of a simplified quantity, the magnetization transfer proportion (MTP), to assess doses. This measure can be estimated through two simple acquisitions and is more robust in the presence of some sources of system imperfections. It also has a dependence upon experimental parameters that is independent of dose, allowing simultaneous optimization at all dose levels. The MTP is shown to be less susceptible to B1 errors than are CPMG measurements of R2. The dose response can be optimized through appropriate choices of the power and offset frequency of the pulses used in magnetization transfer imaging.
NASA Astrophysics Data System (ADS)
Scales, Wayne; Bernhardt, Paul; McCarrick, Michael; Briczinski, Stanley; Mahmoudian, Alireza; Fu, Haiyang; Ranade Bordikar, Maitrayee; Samimi, Alireza
There has been significant interest in so-called narrowband Stimulated Electromagnetic Emission SEE over the past several years due to recent discoveries at the High Frequency Active Auroral Research Program HAARP facility near Gakone, Alaska. Narrowband SEE (NSEE) has been defined as spectral features in the SEE spectrum typically within 1 kHz of the transmitter (or pump) frequency. SEE is due to nonlinear processes leading to re-radiation at frequencies other than the pump wave frequency during heating the ionospheric plasma with high power HF radio waves. Although NSEE exhibits a richly complex structure, it has now been shown after a substantial number of observations at HAARP, that NSEE can be grouped into two basic classes. The first are those spectral features, associated with Stimulated Brillouin Scatter SBS, which typically occur when the pump frequency is not close to electron gyro-harmonic frequencies. Typically, these spectral features are within roughly 50 Hz of the pump wave frequency where it is to be noted that the O+ ion gyro-frequency is roughly 50 Hz. The second class of spectral features corresponds to the case when the pump wave frequency is typically within roughly 10 kHz of electron gyro-harmonic frequencies. In this case, spectral features ordered by harmonics of ion gyro-frequencies are typically observed, and termed Stimulated Ion Bernstein Scatter SIBS. There is also important parametric behavior on both classes of NSEE depending on the pump wave parameters including the field strength, antenna beam angle, and electron gyro-harmonic number. This presentation will first provide an overview of the recent NSEE experimental observations at HAARP. Both Stimulated Brillouin Scatter SBS and Stimulated Ion Bernstein Scatter SIBS observations will be discussed as well as their relationship to each other. Possible theoretical formulation in terms of parametric decay instabilities will be provided. Computer simulation model results will be presented to provide insight into associated higher order nonlinear effects including particle acceleration and wave-wave processes. Both theory and model results will be put into the context of the experimental observations. Finally, possible applications of NSEE will be pointed out including triggering diagnostics for artificial ionization layer formation, proton precipitation event diagnostics, and electron temperature measurements in the heated volume.
NASA Technical Reports Server (NTRS)
Taylor, Burt L , III; Oppenheimer, Frank L
1951-01-01
Experimental frequency-response characteristics of engine speed for a typical turbine-propeller engine are presented. These data were obtained by subjecting the engine to sinusoidal variations of fuel flow and propeller-blade-angle inputs. Correlation is made between these experimental data and analytical frequency-response characteristics obtained from a linear differential equation derived from steady-state torque-speed relations.
Explanation of the cw operation of the Er3+ 3-μm crystal laser
NASA Astrophysics Data System (ADS)
Pollnau, M.; Graf, Th.; Balmer, J. E.; Lüthy, W.; Weber, H. P.
1994-05-01
A computer simulation of the Er3+ 3-μm crystal laser considering the full rate-equation scheme up to the 4F7/2 level has been performed. The influence of the important system parameters on lasing and the interaction of these parameters has been clarified with multiple-parameter variations. Stimulated emission is fed mainly by up-conversion from the lower laser level and in many cases is reduced by the quenching of the lifetime of this level. However, also without up-conversion a set of parameters can be found that allows lasing. Up-conversion from the upper laser level is detrimental to stimulated emission but may be compensated by cross relaxation from the 4S3/2 level. For a typical experimental situation we started with the parameters of Er3+:LiYF4. In addition, the host materials Y3Al5O12 (YAG), YAlO3, Y3Sc2Al3O12 (YSGG), and BaY2F8, as well as the possibilities of codoping, are discussed. In view of the consideration of all excited levels up to 4F7/2, all lifetimes and branching ratios, ground-state depletion, excited-state absorption, three up-conversion processes as well as their inverse processes, stimulated emission, and a realistic resonator design, this is, to our knowledge, the most detailed investigation of the Er3+ 3-μm crystal laser performed so far.
Group Contribution Methods for Phase Equilibrium Calculations.
Gmehling, Jürgen; Constantinescu, Dana; Schmid, Bastian
2015-01-01
The development and design of chemical processes are carried out by solving the balance equations of a mathematical model for sections of or the whole chemical plant with the help of process simulators. For process simulation, besides kinetic data for the chemical reaction, various pure component and mixture properties are required. Because of the great importance of separation processes for a chemical plant in particular, a reliable knowledge of the phase equilibrium behavior is required. The phase equilibrium behavior can be calculated with the help of modern equations of state or g(E)-models using only binary parameters. But unfortunately, only a very small part of the experimental data for fitting the required binary model parameters is available, so very often these models cannot be applied directly. To solve this problem, powerful predictive thermodynamic models have been developed. Group contribution methods allow the prediction of the required phase equilibrium data using only a limited number of group interaction parameters. A prerequisite for fitting the required group interaction parameters is a comprehensive database. That is why for the development of powerful group contribution methods almost all published pure component properties, phase equilibrium data, excess properties, etc., were stored in computerized form in the Dortmund Data Bank. In this review, the present status, weaknesses, advantages and disadvantages, possible applications, and typical results of the different group contribution methods for the calculation of phase equilibria are presented.
Longhi, Daniel Angelo; Martins, Wiaslan Figueiredo; da Silva, Nathália Buss; Carciofi, Bruno Augusto Mattar; de Aragão, Gláucia Maria Falcão; Laurindo, João Borges
2017-01-02
In predictive microbiology, the model parameters have been estimated using the sequential two-step modeling (TSM) approach, in which primary models are fitted to the microbial growth data, and then secondary models are fitted to the primary model parameters to represent their dependence with the environmental variables (e.g., temperature). The Optimal Experimental Design (OED) approach allows reducing the experimental workload and costs, and the improvement of model identifiability because primary and secondary models are fitted simultaneously from non-isothermal data. Lactobacillus viridescens was selected to this study because it is a lactic acid bacterium of great interest to meat products preservation. The objectives of this study were to estimate the growth parameters of L. viridescens in culture medium from TSM and OED approaches and to evaluate both the number of experimental data and the time needed in each approach and the confidence intervals of the model parameters. Experimental data for estimating the model parameters with TSM approach were obtained at six temperatures (total experimental time of 3540h and 196 experimental data of microbial growth). Data for OED approach were obtained from four optimal non-isothermal profiles (total experimental time of 588h and 60 experimental data of microbial growth), two profiles with increasing temperatures (IT) and two with decreasing temperatures (DT). The Baranyi and Roberts primary model and the square root secondary model were used to describe the microbial growth, in which the parameters b and T min (±95% confidence interval) were estimated from the experimental data. The parameters obtained from TSM approach were b=0.0290 (±0.0020) [1/(h 0.5 °C)] and T min =-1.33 (±1.26) [°C], with R 2 =0.986 and RMSE=0.581, and the parameters obtained with the OED approach were b=0.0316 (±0.0013) [1/(h 0.5 °C)] and T min =-0.24 (±0.55) [°C], with R 2 =0.990 and RMSE=0.436. The parameters obtained from OED approach presented smaller confidence intervals and best statistical indexes than those from TSM approach. Besides, less experimental data and time were needed to estimate the model parameters with OED than TSM. Furthermore, the OED model parameters were validated with non-isothermal experimental data with great accuracy. In this way, OED approach is feasible and is a very useful tool to improve the prediction of microbial growth under non-isothermal condition. Copyright © 2016 Elsevier B.V. All rights reserved.
User Guidelines and Best Practices for CASL VUQ Analysis Using Dakota
DOE Office of Scientific and Technical Information (OSTI.GOV)
Adams, Brian M.; Coleman, Kayla; Gilkey, Lindsay N.
Sandia’s Dakota software (available at http://dakota.sandia.gov) supports science and engineering transformation through advanced exploration of simulations. Specifically it manages and analyzes ensembles of simulations to provide broader and deeper perspective for analysts and decision makers. This enables them to enhance understanding of risk, improve products, and assess simulation credibility. In its simplest mode, Dakota can automate typical parameter variation studies through a generic interface to a physics-based computational model. This can lend efficiency and rigor to manual parameter perturbation studies already being conducted by analysts. However, Dakota also delivers advanced parametric analysis techniques enabling design exploration, optimization, model calibration, riskmore » analysis, and quantification of margins and uncertainty with such models. It directly supports verification and validation activities. Dakota algorithms enrich complex science and engineering models, enabling an analyst to answer crucial questions of - Sensitivity: Which are the most important input factors or parameters entering the simulation, and how do they influence key outputs?; Uncertainty: What is the uncertainty or variability in simulation output, given uncertainties in input parameters? How safe, reliable, robust, or variable is my system? (Quantification of margins and uncertainty, QMU); Optimization: What parameter values yield the best performing design or operating condition, given constraints? Calibration: What models and/or parameters best match experimental data? In general, Dakota is the Consortium for Advanced Simulation of Light Water Reactors (CASL) delivery vehicle for verification, validation, and uncertainty quantification (VUQ) algorithms. It permits ready application of the VUQ methods described above to simulation codes by CASL researchers, code developers, and application engineers.« less
NASA Astrophysics Data System (ADS)
Yoon, Heonjun; Kim, Miso; Park, Choon-Su; Youn, Byeng D.
2018-01-01
Piezoelectric vibration energy harvesting (PVEH) has received much attention as a potential solution that could ultimately realize self-powered wireless sensor networks. Since most ambient vibrations in nature are inherently random and nonstationary, the output performances of PVEH devices also randomly change with time. However, little attention has been paid to investigating the randomly time-varying electroelastic behaviors of PVEH systems both analytically and experimentally. The objective of this study is thus to make a step forward towards a deep understanding of the time-varying performances of PVEH devices under nonstationary random vibrations. Two typical cases of nonstationary random vibration signals are considered: (1) randomly-varying amplitude (amplitude modulation; AM) and (2) randomly-varying amplitude with randomly-varying instantaneous frequency (amplitude and frequency modulation; AM-FM). In both cases, this study pursues well-balanced correlations of analytical predictions and experimental observations to deduce the relationships between the time-varying output performances of the PVEH device and two primary input parameters, such as a central frequency and an external electrical resistance. We introduce three correlation metrics to quantitatively compare analytical prediction and experimental observation, including the normalized root mean square error, the correlation coefficient, and the weighted integrated factor. Analytical predictions are in an excellent agreement with experimental observations both mechanically and electrically. This study provides insightful guidelines for designing PVEH devices to reliably generate electric power under nonstationary random vibrations.
Fermionology in the Kondo-Heisenberg model: the case of CeCoIn5
NASA Astrophysics Data System (ADS)
Zhong, Yin; Zhang, Lan; Lu, Han-Tao; Luo, Hong-Gang
2015-09-01
The Fermi surface of heavy electron systems plays a fundamental role in understanding their variety of puzzling phenomena, for example, quantum criticality, strange metal behavior, unconventional superconductivity and even enigmatic phases with yet unknown order parameters. The spectroscopy measurement of the typical heavy fermion superconductor CeCoIn5 has demonstrated multi-Fermi surface structure, which has not been studied in detail theoretically in a model system like the Kondo-Heisenberg model. In this work, we take a step toward such a theoretical model by revisiting the Kondo-Heisenberg model. It is found that the usual self-consistent calculation cannot reproduce the fermionology of the experimental observation of the system due to the sign binding between the hopping of the conduction electrons and the mean-field valence-bond order. To overcome such inconsistency, the mean-field valence-bond order is considered as a free/fitting parameter to correlate them with real-life experiments as performed in recent experiments [M.P. Allan, F. Massee, D.K. Morr, J. Van Dyke, A.W. Rost, A.P. Mackenzie, C. Petrovic, J.C. Davis, Nat. Phys. 9, 468 (2013); J. Van Dyke, F. Massee, M.P. Allan, J.C. Davis, C. Petrovic, D.K. Morr, Proc. Natl. Acad. Sci. 111, 11663 (2014)], which also explicitly reflects the intrinsic dispersion of local electrons observed in experimental measurements. Given the fermionology, the calculated effective mass enhancement, entropy, superfluid density and Knight shift are all in qualitative agreement with the experimental results of CeCoIn5, which confirms our assumption. Our result supports a d_{x^2 - y^2 }-wave pairing structure in the heavy fermion material CeCoIn5.
Meirovitch, Eva; Shapiro, Yury E.; Polimeno, Antonino; Freed, Jack H.
2009-01-01
15N-1H spin relaxation is a powerful method for deriving information on protein dynamics. The traditional method of data analysis is model-free (MF), where the global and local N-H motions are independent and the local geometry is simplified. The common MF analysis consists of fitting single-field data. The results are typically field-dependent, and multi-field data cannot be fit with standard fitting schemes. Cases where known functional dynamics has not been detected by MF were identified by us and others. Recently we applied to spin relaxation in proteins the Slowly Relaxing Local Structure (SRLS) approach which accounts rigorously for mode-mixing and general features of local geometry. SRLS was shown to yield MF in appropriate asymptotic limits. We found that the experimental spectral density corresponds quite well to the SRLS spectral density. The MF formulae are often used outside of their validity ranges, allowing small data sets to be force-fitted with good statistics but inaccurate best-fit parameters. This paper focuses on the mechanism of force-fitting and its implications. It is shown that MF force-fits the experimental data because mode-mixing, the rhombic symmetry of the local ordering and general features of local geometry are not accounted for. Combined multi-field multi-temperature data analyzed by MF may lead to the detection of incorrect phenomena, while conformational entropy derived from MF order parameters may be highly inaccurate. On the other hand, fitting to more appropriate models can yield consistent physically insightful information. This requires that the complexity of the theoretical spectral densities matches the integrity of the experimental data. As shown herein, the SRLS densities comply with this requirement. PMID:16821820
NASA Astrophysics Data System (ADS)
Deshayes, Yannick; Verdier, Frederic; Bechou, Laurent; Tregon, Bernard; Danto, Yves; Laffitte, Dominique; Goudard, Jean Luc
2004-09-01
High performance and high reliability are two of the most important goals driving the penetration of optical transmission into telecommunication systems ranging from 880 nm to 1550 nm. Lifetime prediction defined as the time at which a parameter reaches its maximum acceptable shirt still stays the main result in terms of reliability estimation for a technology. For optoelectronic emissive components, selection tests and life testing are specifically used for reliability evaluation according to Telcordia GR-468 CORE requirements. This approach is based on extrapolation of degradation laws, based on physics of failure and electrical or optical parameters, allowing both strong test time reduction and long-term reliability prediction. Unfortunately, in the case of mature technology, there is a growing complexity to calculate average lifetime and failure rates (FITs) using ageing tests in particular due to extremely low failure rates. For present laser diode technologies, time to failure tend to be 106 hours aged under typical conditions (Popt=10 mW and T=80°C). These ageing tests must be performed on more than 100 components aged during 10000 hours mixing different temperatures and drive current conditions conducting to acceleration factors above 300-400. These conditions are high-cost, time consuming and cannot give a complete distribution of times to failure. A new approach consists in use statistic computations to extrapolate lifetime distribution and failure rates in operating conditions from physical parameters of experimental degradation laws. In this paper, Distributed Feedback single mode laser diodes (DFB-LD) used for 1550 nm telecommunication network working at 2.5 Gbit/s transfer rate are studied. Electrical and optical parameters have been measured before and after ageing tests, performed at constant current, according to Telcordia GR-468 requirements. Cumulative failure rates and lifetime distributions are computed using statistic calculations and equations of drift mechanisms versus time fitted from experimental measurements.
Level density parameter behaviour at high excitation energy
NASA Astrophysics Data System (ADS)
D'Arrigo, A.; Giardina, G.; Taccone, A.
1991-06-01
We present a formalism to calculate the intrinsic (without collective effects) and effective (with collective effects) level density parameters over a wide range of excitation energy up to 180 MeV. The behaviour of aint and aeff as an energy function is shown for several typical nuclei (115Cd, 129Te, 148Pm, 173Yb, 192Ir and 248Cm). Moreover, local systematics of the parameter aeff as a function of the neutron number N, also for nuclei extremely far from the β-line, is shown for some typical nuclei (Rb, Pd, Sn, Ba and Hg) at excitation energies of 15, 80 and 150 MeV.
Analysis of uncertainties in Monte Carlo simulated organ dose for chest CT
NASA Astrophysics Data System (ADS)
Muryn, John S.; Morgan, Ashraf G.; Segars, W. P.; Liptak, Chris L.; Dong, Frank F.; Primak, Andrew N.; Li, Xiang
2015-03-01
In Monte Carlo simulation of organ dose for a chest CT scan, many input parameters are required (e.g., half-value layer of the x-ray energy spectrum, effective beam width, and anatomical coverage of the scan). The input parameter values are provided by the manufacturer, measured experimentally, or determined based on typical clinical practices. The goal of this study was to assess the uncertainties in Monte Carlo simulated organ dose as a result of using input parameter values that deviate from the truth (clinical reality). Organ dose from a chest CT scan was simulated for a standard-size female phantom using a set of reference input parameter values (treated as the truth). To emulate the situation in which the input parameter values used by the researcher may deviate from the truth, additional simulations were performed in which errors were purposefully introduced into the input parameter values, the effects of which on organ dose per CTDIvol were analyzed. Our study showed that when errors in half value layer were within ± 0.5 mm Al, the errors in organ dose per CTDIvol were less than 6%. Errors in effective beam width of up to 3 mm had negligible effect (< 2.5%) on organ dose. In contrast, when the assumed anatomical center of the patient deviated from the true anatomical center by 5 cm, organ dose errors of up to 20% were introduced. Lastly, when the assumed extra scan length was longer by 4 cm than the true value, dose errors of up to 160% were found. The results answer the important question: to what level of accuracy each input parameter needs to be determined in order to obtain accurate organ dose results.
Plasma characteristics of direct current enhanced cylindrical inductively coupled plasma source
NASA Astrophysics Data System (ADS)
Yue, HUA; Jian, SONG; Zeyu, HAO; Chunsheng, REN
2018-06-01
Experimental results of a direct current enhanced inductively coupled plasma (DCE-ICP) source which consists of a typical cylindrical ICP source and a plate-to-grid DC electrode are reported. With the use of this new source, the plasma characteristic parameters, namely, electron density, electron temperature and plasma uniformity, are measured by Langmuir floating double probe. It is found that DC discharge enhances the electron density and decreases the electron temperature, dramatically. Moreover, the plasma uniformity is obviously improved with the operation of DC and radio frequency (RF) hybrid discharge. Furthermore, the nonlinear enhancement effect of electron density with DC + RF hybrid discharge is confirmed. The presented observation indicates that the DCE-ICP source provides an effective method to obtain high-density uniform plasma, which is desirable for practical industrial applications.
Control of stacking loads in final waste disposal according to the borehole technique
DOE Office of Scientific and Technical Information (OSTI.GOV)
Feuser, W.; Barnert, E.; Vijgen, H.
1996-12-01
The semihydrostatic model has been developed in order to assess the mechanical toads acting on heat-generating ILW(Q) and HTGR fuel element waste packages to be emplaced in vertical boreholes according to the borehole technique in underground rock salt formations. For the experimental validation of the theory, laboratory test stands reduced in scale are set up to simulate the bottom section of a repository borehole. A comparison of the measurement results with the data computed by the model, a correlation between the test stand results, and a systematic determination of material-typical crushed salt parameters in a separate research project will servemore » to derive a set of characteristic equations enabling a description of real conditions in a future repository.« less
NASA Astrophysics Data System (ADS)
Røising, Henrik Schou; Simon, Steven H.
2018-03-01
Topological insulator surfaces in proximity to superconductors have been proposed as a way to produce Majorana fermions in condensed matter physics. One of the simplest proposed experiments with such a system is Majorana interferometry. Here we consider two possibly conflicting constraints on the size of such an interferometer. Coupling of a Majorana mode from the edge (the arms) of the interferometer to vortices in the center of the device sets a lower bound on the size of the device. On the other hand, scattering to the usually imperfectly insulating bulk sets an upper bound. From estimates of experimental parameters, we find that typical samples may have no size window in which the Majorana interferometer can operate, implying that a new generation of more highly insulating samples must be explored.
Matter-wave dark solitons in boxlike traps
NASA Astrophysics Data System (ADS)
Sciacca, M.; Barenghi, C. F.; Parker, N. G.
2017-01-01
Motivated by the experimental development of quasihomogeneous Bose-Einstein condensates confined in boxlike traps, we study numerically the dynamics of dark solitons in such traps at zero temperature. We consider the cases where the side walls of the box potential rise either as a power law or a Gaussian. While the soliton propagates through the homogeneous interior of the box without dissipation, it typically dissipates energy during a reflection from a wall through the emission of sound waves, causing a slight increase in the soliton's speed. We characterize this energy loss as a function of the wall parameters. Moreover, over multiple oscillations and reflections in the boxlike trap, the energy loss and speed increase of the soliton can be significant, although the decay eventually becomes stabilized when the soliton equilibrates with the ambient sound field.
Manipulations of core temperatures in ischemia-reperfusion lung injury in rabbits.
Chang, Hung; Huang, Kun-Lun; Li, Min-Hui; Hsu, Ching-Wang; Tsai, Shih-Hung; Chu, Shi-Jye
2008-01-01
The present study was designed to determine the effect of various core temperatures on acute lung injury induced by ischemia-reperfusion (I/R) in our isolated rabbit lung model. Typical acute lung injury was successfully induced by 30 min of ischemia followed by 90 min of reperfusion observation. The I/R elicited a significant increase in pulmonary arterial pressure, microvascular permeability (measured by using the capillary filtration coefficient, Kfc), Delta Kfc ratio, lung weight gain and the protein concentration of the bronchoalveolar lavage fluid. Mild hypothermia significantly attenuated acute lung injury induced by I/R, all parameters having decreased significantly (p<0.05); conversely, mild hyperthermia did not further exacerbate acute lung injury. These experimental data suggest that mild hypothermia significantly ameliorated acute lung injury induced by ischemia-reperfusion in rabbits.
Controllable high-fidelity quantum state transfer and entanglement generation in circuit QED.
Xu, Peng; Yang, Xu-Chen; Mei, Feng; Xue, Zheng-Yuan
2016-01-25
We propose a scheme to realize controllable quantum state transfer and entanglement generation among transmon qubits in the typical circuit QED setup based on adiabatic passage. Through designing the time-dependent driven pulses applied on the transmon qubits, we find that fast quantum sate transfer can be achieved between arbitrary two qubits and quantum entanglement among the qubits also can also be engineered. Furthermore, we numerically analyzed the influence of the decoherence on our scheme with the current experimental accessible systematical parameters. The result shows that our scheme is very robust against both the cavity decay and qubit relaxation, the fidelities of the state transfer and entanglement preparation process could be very high. In addition, our scheme is also shown to be insensitive to the inhomogeneous of qubit-resonator coupling strengths.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Zhang, Y. B.; Budai, J. D.; Tischler, J. Z.
How boundaries surrounding recrystallization grains migrate through the 3D network of dislocation boundaries in deformed crystalline materials is unknown and critical for the resulting recrystallized crystalline materials. Furthermore, by using X-ray Laue diffraction microscopy, we show for the first time the migration pattern of a typical recrystallization boundary through a well-characterized deformation matrix. The data provide a unique possibility to investigate effects of both boundary misorientation and plane normal on the migration, information which cannot be accessed with any other techniques. Our results show that neither of these two parameters can explain the observed migration behavior. Instead we suggest thatmore » the subdivision of the deformed microstructure ahead of the boundary plays the dominant role. Our experimental observations challenge the assumptions of existing recrystallization theories, and set the stage for determination of mobilities of recrystallization boundaries.« less
Meigal, Alexander Yu.; Miroshnichenko, German G.; Kuzmina, Anna P.; Rissanen, Saara M.; Georgiadis, Stefanos D.; Karjalainen, Pasi A.
2015-01-01
We compared a set of surface EMG (sEMG) parameters in several groups of schizophrenia (SZ, n = 74) patients and healthy controls (n = 11) and coupled them with the clinical data. sEMG records were quantified with spectral, mutual information (MI) based and recurrence quantification analysis (RQA) parameters, and with approximate and sample entropies (ApEn and SampEn). Psychotic deterioration was estimated with Positive and Negative Syndrome Scale (PANSS) and with the positive subscale of PANSS. Neuroleptic-induced parkinsonism (NIP) motor symptoms were estimated with Simpson-Angus Scale (SAS). Dyskinesia was measured with Abnormal Involuntary Movement Scale (AIMS). We found that there was no difference in values of sEMG parameters between healthy controls and drug-naïve SZ patients. The most specific group was formed of SZ patients who were administered both typical and atypical antipsychotics (AP). Their sEMG parameters were significantly different from those of SZ patients taking either typical or atypical AP or taking no AP. This may represent a kind of synergistic effect of these two classes of AP. For the clinical data we found that PANSS, SAS, and AIMS were not correlated to any of the sEMG parameters. Conclusion: with nonlinear parameters of sEMG it is possible to reveal NIP in SZ patients, and it may help to discriminate between different clinical groups of SZ patients. Combined typical and atypical AP therapy has stronger effect on sEMG than a therapy with AP of only one class. PMID:26217236
Meigal, Alexander Yu; Miroshnichenko, German G; Kuzmina, Anna P; Rissanen, Saara M; Georgiadis, Stefanos D; Karjalainen, Pasi A
2015-01-01
We compared a set of surface EMG (sEMG) parameters in several groups of schizophrenia (SZ, n = 74) patients and healthy controls (n = 11) and coupled them with the clinical data. sEMG records were quantified with spectral, mutual information (MI) based and recurrence quantification analysis (RQA) parameters, and with approximate and sample entropies (ApEn and SampEn). Psychotic deterioration was estimated with Positive and Negative Syndrome Scale (PANSS) and with the positive subscale of PANSS. Neuroleptic-induced parkinsonism (NIP) motor symptoms were estimated with Simpson-Angus Scale (SAS). Dyskinesia was measured with Abnormal Involuntary Movement Scale (AIMS). We found that there was no difference in values of sEMG parameters between healthy controls and drug-naïve SZ patients. The most specific group was formed of SZ patients who were administered both typical and atypical antipsychotics (AP). Their sEMG parameters were significantly different from those of SZ patients taking either typical or atypical AP or taking no AP. This may represent a kind of synergistic effect of these two classes of AP. For the clinical data we found that PANSS, SAS, and AIMS were not correlated to any of the sEMG parameters. with nonlinear parameters of sEMG it is possible to reveal NIP in SZ patients, and it may help to discriminate between different clinical groups of SZ patients. Combined typical and atypical AP therapy has stronger effect on sEMG than a therapy with AP of only one class.
A simplified approach to characterizing a kilovoltage source spectrum for accurate dose computation.
Poirier, Yannick; Kouznetsov, Alexei; Tambasco, Mauro
2012-06-01
To investigate and validate the clinical feasibility of using half-value layer (HVL) and peak tube potential (kVp) for characterizing a kilovoltage (kV) source spectrum for the purpose of computing kV x-ray dose accrued from imaging procedures. To use this approach to characterize a Varian® On-Board Imager® (OBI) source and perform experimental validation of a novel in-house hybrid dose computation algorithm for kV x-rays. We characterized the spectrum of an imaging kV x-ray source using the HVL and the kVp as the sole beam quality identifiers using third-party freeware Spektr to generate the spectra. We studied the sensitivity of our dose computation algorithm to uncertainties in the beam's HVL and kVp by systematically varying these spectral parameters. To validate our approach experimentally, we characterized the spectrum of a Varian® OBI system by measuring the HVL using a Farmer-type Capintec ion chamber (0.06 cc) in air and compared dose calculations using our computationally validated in-house kV dose calculation code to measured percent depth-dose and transverse dose profiles for 80, 100, and 125 kVp open beams in a homogeneous phantom and a heterogeneous phantom comprising tissue, lung, and bone equivalent materials. The sensitivity analysis of the beam quality parameters (i.e., HVL, kVp, and field size) on dose computation accuracy shows that typical measurement uncertainties in the HVL and kVp (±0.2 mm Al and ±2 kVp, respectively) source characterization parameters lead to dose computation errors of less than 2%. Furthermore, for an open beam with no added filtration, HVL variations affect dose computation accuracy by less than 1% for a 125 kVp beam when field size is varied from 5 × 5 cm(2) to 40 × 40 cm(2). The central axis depth dose calculations and experimental measurements for the 80, 100, and 125 kVp energies agreed within 2% for the homogeneous and heterogeneous block phantoms, and agreement for the transverse dose profiles was within 6%. The HVL and kVp are sufficient for characterizing a kV x-ray source spectrum for accurate dose computation. As these parameters can be easily and accurately measured, they provide for a clinically feasible approach to characterizing a kV energy spectrum to be used for patient specific x-ray dose computations. Furthermore, these results provide experimental validation of our novel hybrid dose computation algorithm. © 2012 American Association of Physicists in Medicine.
Implementation of EPICS based vacuum control system for variable energy cyclotron centre, Kolkata
NASA Astrophysics Data System (ADS)
Roy, Anindya; Bhole, R. B.; Nandy, Partha P.; Yadav, R. C.; Pal, Sarbajit; Roy, Amitava
2015-03-01
The vacuum system of the Room Temperature (K = 130) Cyclotron of Variable Energy Cyclotron Centre is comprised of vacuum systems of main machine and Beam Transport System. The vacuum control system is upgraded to a PLC based Automated system from the initial relay based Manual system. The supervisory control of the vacuum system is implemented in Experimental Physics and Industrial Control System (EPICS). An EPICS embedded ARM based vacuum gauge controller is developed to mitigate the requirement of vendor specific gauge controller for gauges and also for seamless integration of the gauge controllers with the control system. A set of MS-Windows ActiveX components with embedded EPICS Channel Access interface are developed to build operator interfaces with less complex programming and to incorporate typical Windows feature, e.g., user authentication, file handling, better fonts, colors, mouse actions etc. into the operator interfaces. The control parameters, monitoring parameters, and system interlocks of the system are archived in MySQL based EPICS MySQL Archiver developed indigenously. In this paper, we describe the architecture, the implementation details, and the performance of the system.
Migration of lymphocytes on fibronectin-coated surfaces: temporal evolution of migratory parameters
NASA Technical Reports Server (NTRS)
Bergman, A. J.; Zygourakis, K.; McIntire, L. V. (Principal Investigator)
1999-01-01
Lymphocytes typically interact with implanted biomaterials through adsorbed exogenous proteins. To provide a more complete characterization of these interactions, analysis of lymphocyte migration on adsorbed extracellular matrix proteins must accompany the commonly performed adhesion studies. We report here a comparison of the migratory and adhesion behavior of Jurkat cells (a T lymphoblastoid cell line) on tissue culture treated and untreated polystyrene surfaces coated with various concentrations of fibronectin. The average speed of cell locomotion showed a biphasic response to substrate adhesiveness for cells migrating on untreated polystyrene and a monotonic decrease for cells migrating on tissue culture-treated polystyrene. A modified approach to the persistent random walk model was implemented to determine the time dependence of cell migration parameters. The random motility coefficient showed significant increases with time when cells migrated on tissue culture-treated polystyrene surfaces, while it remained relatively constant for experiments with untreated polystyrene plates. Finally, a cell migration computer model was developed to verify our modified persistent random walk analysis. Simulation results suggest that our experimental data were consistent with temporally increasing random motility coefficients.
NASA Astrophysics Data System (ADS)
Colla, V.; Desanctis, M.; Dimatteo, A.; Lovicu, G.; Valentini, R.
2011-09-01
The purpose of the present work is the implementation and validation of a model able to predict the microstructure changes and the mechanical properties in the modern high-strength dual-phase steels after the continuous annealing process line (CAPL) and galvanizing (Galv) process. Experimental continuous cooling transformation (CCT) diagrams for 13 differently alloying dual-phase steels were measured by dilatometry from the intercritical range and were used to tune the parameters of the microstructural prediction module of the model. Mechanical properties and microstructural features were measured for more than 400 dual-phase steels simulating the CAPL and Galv industrial process, and the results were used to construct the mechanical model that predicts mechanical properties from microstructural features, chemistry, and process parameters. The model was validated and proved its efficiency in reproducing the transformation kinetic and mechanical properties of dual-phase steels produced by typical industrial process. Although it is limited to the dual-phase grades and chemical compositions explored, this model will constitute a useful tool for the steel industry.
Cavity Heating Experiments Supporting Shuttle Columbia Accident Investigation
NASA Technical Reports Server (NTRS)
Everhart, Joel L.; Berger, Karen T.; Bey, Kim S.; Merski, N. Ronald; Wood, William A.
2011-01-01
The two-color thermographic phosphor method has been used to map the local heating augmentation of scaled idealized cavities at conditions simulating the windward surface of the Shuttle Orbiter Columbia during flight STS-107. Two experiments initiated in support of the Columbia Accident Investigation were conducted in the Langley 20-Inch Mach 6 Tunnel. Generally, the first test series evaluated open (length-to-depth less than 10) rectangular cavity geometries proposed as possible damage scenarios resulting from foam and ice impact during launch at several discrete locations on the vehicle windward surface, though some closed (length-to-depth greater than 13) geometries were briefly examined. The second test series was designed to parametrically evaluate heating augmentation in closed rectangular cavities. The tests were conducted under laminar cavity entry conditions over a range of local boundary layer edge-flow parameters typical of re-entry. Cavity design parameters were developed using laminar computational predictions, while the experimental boundary layer state conditions were inferred from the heating measurements. An analysis of the aeroheating caused by cavities allowed exclusion of non-breeching damage from the possible loss scenarios being considered during the investigation.
Implementation of EPICS based vacuum control system for variable energy cyclotron centre, Kolkata.
Roy, Anindya; Bhole, R B; Nandy, Partha P; Yadav, R C; Pal, Sarbajit; Roy, Amitava
2015-03-01
The vacuum system of the Room Temperature (K = 130) Cyclotron of Variable Energy Cyclotron Centre is comprised of vacuum systems of main machine and Beam Transport System. The vacuum control system is upgraded to a PLC based Automated system from the initial relay based Manual system. The supervisory control of the vacuum system is implemented in Experimental Physics and Industrial Control System (EPICS). An EPICS embedded ARM based vacuum gauge controller is developed to mitigate the requirement of vendor specific gauge controller for gauges and also for seamless integration of the gauge controllers with the control system. A set of MS-Windows ActiveX components with embedded EPICS Channel Access interface are developed to build operator interfaces with less complex programming and to incorporate typical Windows feature, e.g., user authentication, file handling, better fonts, colors, mouse actions etc. into the operator interfaces. The control parameters, monitoring parameters, and system interlocks of the system are archived in MySQL based EPICS MySQL Archiver developed indigenously. In this paper, we describe the architecture, the implementation details, and the performance of the system.
A Parametric Geometry Computational Fluid Dynamics (CFD) Study Utilizing Design of Experiments (DOE)
NASA Technical Reports Server (NTRS)
Rhew, Ray D.; Parker, Peter A.
2007-01-01
Design of Experiments (DOE) techniques were applied to the Launch Abort System (LAS) of the NASA Crew Exploration Vehicle (CEV) parametric geometry Computational Fluid Dynamics (CFD) study to efficiently identify and rank the primary contributors to the integrated drag over the vehicles ascent trajectory. Typical approaches to these types of activities involve developing all possible combinations of geometries changing one variable at a time, analyzing them with CFD, and predicting the main effects on an aerodynamic parameter, which in this application is integrated drag. The original plan for the LAS study team was to generate and analyze more than1000 geometry configurations to study 7 geometric parameters. By utilizing DOE techniques the number of geometries was strategically reduced to 84. In addition, critical information on interaction effects among the geometric factors were identified that would not have been possible with the traditional technique. Therefore, the study was performed in less time and provided more information on the geometric main effects and interactions impacting drag generated by the LAS. This paper discusses the methods utilized to develop the experimental design, execution, and data analysis.
Electromagnetic flat sheet forming by spiral type actuator coil
NASA Astrophysics Data System (ADS)
Akbar, S.; Aleem, M. A.; Sarwar, M. N.; Zillohu, A. U.; Awan, M. S.; Haider, A.; Ahmad, Z.; Akhtar, S.; Farooque, M.
2016-08-01
Focus of present work is to develop a setup for high strain rate electromagnetic forming of thin aluminum sheets (0.5, 1.0, 1.5 and 2.0 mm) and optimization of forming parameters. Flat spiral coil of 99.9% pure Cu strip (2.5x8.0 mm) with self-inductance 11 μH, 13 no. of turns and resultant outer diameter of 130mm has been fabricated and was coupled to a capacitor bank of energy, voltage and capacitance of 9 kJ, 900 V and 22.8 mF, respectively. To optimize the coil design, a commercially available software FEMM-4.2 was used to simulate the electromagnetic field profile generated by the coils of different pitch but same number of turns. Results of electromagnetic field intensity proposed by simulation agree in close proximity with those of theoretical as well as experimental data. The calculation of electromagnetic force and magnetic couplings between the coil and metal sheet are made. Forming parameters were optimized for different sheet thicknesses. Electromagnetic field intensity's profile plays a principal role in forming of typical shapes and patterns in sheets.
Marshall, John W; Dahlstrom, Dean B; Powley, Kramer D
2011-06-01
To satisfy the Criminal Code of Canada's definition of a firearm, a barreled weapon must be capable of causing serious bodily injury or death to a person. Canadian courts have accepted the forensically established criteria of "penetration or rupture of an eye" as serious bodily injury. The minimal velocity of nonconventional ammunition required to penetrate the eye including airsoft projectiles has yet to be established. To establish minimal threshold requirements for eye penetration, empirical tests were conducted using a variety of airsoft projectiles. Using the data obtained from these tests, and previous research using "air gun" projectiles, an "energy density" parameter was calculated for the minimum penetration threshold of an eye. Airsoft guns capable of achieving velocities in excess of 99 m/s (325 ft/s) using conventional 6-mm airsoft ammunition will satisfy the forensically established criteria of "serious bodily injury." The energy density parameter for typical 6-mm plastic airsoft projectiles is 4.3 to 4.8 J/cm². This calculation also encompasses 4.5-mm steel BBs.
Williams, Loriann; Jackson, Carl P T; Choe, Noreen; Pelland, Lucie; Scott, Stephen H; Reynolds, James N
2014-01-01
Fetal alcohol spectrum disorder (FASD) is associated with a large number of cognitive and sensory-motor deficits. In particular, the accurate assessment of sensory-motor deficits in children with FASD is not always simple and relies on clinical assessment tools that may be coarse and subjective. Here we present a new approach: using robotic technology to accurately and objectively assess motor deficits of children with FASD in a center-out reaching task. A total of 152 typically developing children and 31 children with FASD, all aged between 5 and 18 were assessed using a robotic exoskeleton device coupled with a virtual reality projection system. Children made reaching movements to 8 peripheral targets in a random order. Reach trajectories were subsequently analyzed to extract 12 parameters that had been previously determined to be good descriptors of a reaching movement, and these parameters were compared for each child with FASD to a normative model derived from the performance of the typically developing population. Compared with typically developing children, the children with FASD were found to be significantly impaired on most of the parameters measured, with the greatest deficits found in initial movement direction error. Also, children with FASD tended to fail more parameters than typically developing children: 95% of typically developing children failed fewer than 3 parameters compared with 69% of children with FASD. These results were particularly pronounced for younger children. The current study has shown that robotic technology is a sensitive and powerful tool that provides increased specificity regarding the type of motor problems exhibited by children with FASD. The high frequency of motor deficits in children with FASD suggests that interventions aimed at stimulating and/or improving motor development should routinely be considered for this population. Copyright © 2013 by the Research Society on Alcoholism.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Altürk, Sümeyye, E-mail: sumeyye-alturk@hotmail.com; Avci, Davut, E-mail: davci@sakarya.edu.tr; Tamer, Ömer, E-mail: omertamer@sakarya.edu.tr
2016-03-25
It is well known that the practical applications of second-order and third-order nonlinear optical (NLO) materials have been reported in modern technology, such as optical data processing, transmission and storage, etc. In this respect, the linear and nonlinear optical parameters (the molecular static polarizability (α), and the first–order static hyperpolarizability (β{sub 0}), the second–order static hyperpolarizability (γ)), UV-vis spectra and HOMO and LUMO energies of 2-(1′-(4’’’-Methoxyphenyl)-5′-(thien-2″-yl)pyrrol-2′-yl)-1,3-benzothiazole were investigated by using the HSEh1PBE/6–311G(d,p) level of density functional theory. The UV–vis spectra were simulated using TD/HSEh1PBE/6– 311G(d,p) level, and the major contributions to the electronic transitions were obtained. The molecular hardness (η)more » and electronegativity (χ) parameters were also obtained by using molecular frontier orbital energies. The NLO parameters of the title compound were calculated, and obtained data were compared with that of para-Nitroaniline (pNA) which is a typical NLO material and the corresponding experimental data. Obtained data of the chromosphere display significant molecular second-and third-nonlinearity.« less
Potashev, Konstantin; Sharonova, Natalia; Breus, Irina
2014-07-01
Clustering was employed for the analysis of obtained experimental data set (42 plants in total) on seed germination in leached chernozem contaminated with kerosene. Among investigated plants were 31 cultivated plants from 11 families (27 species and 20 varieties) and 11 wild plant species from 7 families, 23 annual and 19 perennial/biannual plant species, 11 monocotyledonous and 31 dicotyledonous plants. Two-dimensional (two-parameter) clustering approach, allowing the estimation of tolerance of germinating seeds using a pair of independent parameters (С75%, V7%) was found to be most effective. These parameters characterized the ability of seeds to both withstand high concentrations of contaminants without the significant reduction of the germination, and maintain high germination rate within certain contaminant concentrations. The performed clustering revealed a number of plant features, which define the relation of a particular plant to a particular tolerance cluster; it has also demonstrated the possibility of generalizing the kerosene results for n-tridecane, which is one of the typical kerosene components. In contrast to the "manual" plant ranking based on the assessment of germination at discrete concentrations of the contaminant, the proposed clustering approach allowed a generalized characterization of the seed tolerance/sensitivity to hydrocarbon contaminants. Copyright © 2014 Elsevier B.V. All rights reserved.
Coupling effects on turning points of infectious diseases epidemics in scale-free networks.
Kim, Kiseong; Lee, Sangyeon; Lee, Doheon; Lee, Kwang Hyung
2017-05-31
Pandemic is a typical spreading phenomenon that can be observed in the human society and is dependent on the structure of the social network. The Susceptible-Infective-Recovered (SIR) model describes spreading phenomena using two spreading factors; contagiousness (β) and recovery rate (γ). Some network models are trying to reflect the social network, but the real structure is difficult to uncover. We have developed a spreading phenomenon simulator that can input the epidemic parameters and network parameters and performed the experiment of disease propagation. The simulation result was analyzed to construct a new marker VRTP distribution. We also induced the VRTP formula for three of the network mathematical models. We suggest new marker VRTP (value of recovered on turning point) to describe the coupling between the SIR spreading and the Scale-free (SF) network and observe the aspects of the coupling effects with the various of spreading and network parameters. We also derive the analytic formulation of VRTP in the fully mixed model, the configuration model, and the degree-based model respectively in the mathematical function form for the insights on the relationship between experimental simulation and theoretical consideration. We discover the coupling effect between SIR spreading and SF network through devising novel marker VRTP which reflects the shifting effect and relates to entropy.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Moler, Kathryn
2010-08-26
We present scanning SQUID microscopy data on the superconductors Sr{sub 2}RuO{sub 4} (T{sub c} = 1.5 K) and PrOs{sub 4}Sb{sub 12} (T{sub c} = 1.8 K). In both of these materials, superconductivity-related time-reversal symmetry-breaking fields have been observed by muon spin rotation; our aim was to visualize the structure of these fields. However in neither Sr{sub 2}RuO{sub 4} nor PrOs{sub 4}Sb{sub 12} do we observe spontaneous superconductivity-related magnetization. In Sr{sub 2}RuO{sub 4}, many experimental results have been interpreted on the basis of a p{sub x} {+-} ip{sub y} superconducting order parameter. This order parameter is expected to give spontaneous magneticmore » induction at sample edges and order parameter domain walls. Supposing large domains, our data restrict domain wall and edge fields to no more than {approx}0.1% and {approx}0.2% of the expected magnitude, respectively. Alternatively, if the magnetization is of the expected order, the typical domain size is limited to {approx}30 nm for random domains, or {approx} 500 nm for periodic domains.« less
Lytton, William W; Neymotin, Samuel A; Hines, Michael L
2008-06-30
In an effort to design a simulation environment that is more similar to that of neurophysiology, we introduce a virtual slice setup in the NEURON simulator. The virtual slice setup runs continuously and permits parameter changes, including changes to synaptic weights and time course and to intrinsic cell properties. The virtual slice setup permits shocks to be applied at chosen locations and activity to be sampled intra- or extracellularly from chosen locations. By default, a summed population display is shown during a run to indicate the level of activity and no states are saved. Simulations can run for hours of model time, therefore it is not practical to save all of the state variables. These, in any case, are primarily of interest at discrete times when experiments are being run: the simulation can be stopped momentarily at such times to save activity patterns. The virtual slice setup maintains an automated notebook showing shocks and parameter changes as well as user comments. We demonstrate how interaction with a continuously running simulation encourages experimental prototyping and can suggest additional dynamical features such as ligand wash-in and wash-out-alternatives to typical instantaneous parameter change. The virtual slice setup currently uses event-driven cells and runs at approximately 2 min/h on a laptop.
Thermodynamic description of Hofmeister effects on the LCST of thermosensitive polymers.
Heyda, Jan; Dzubiella, Joachim
2014-09-18
Cosolvent effects on protein or polymer collapse transitions are typically discussed in terms of a two-state free energy change that is strictly linear in cosolute concentration. Here we investigate in detail the nonlinear thermodynamic changes of the collapse transition occurring at the lower critical solution temperature (LCST) of the role-model polymer poly(N-isopropylacrylamide) [PNIPAM] induced by Hofmeister salts. First, we establish an equation, based on the second-order expansion of the two-state free energy in concentration and temperature space, which excellently fits the experimental LCST curves and enables us to directly extract the corresponding thermodynamic parameters. Linear free energy changes, grounded on generic excluded-volume mechanisms, are indeed found for strongly hydrated kosmotropes. In contrast, for weakly hydrated chaotropes, we find significant nonlinear changes related to higher order thermodynamic derivatives of the preferential interaction parameter between salts and polymer. The observed non-monotonic behavior of the LCST can then be understood from a not yet recognized sign change of the preferential interaction parameter with salt concentration. Finally, we find that solute partitioning models can possibly predict the linear free energy changes for the kosmotropes, but fail for chaotropes. Our findings cast strong doubt on their general applicability to protein unfolding transitions induced by chaotropes.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ewsuk, K.G.; Cochran, R.J.; Blackwell, B.F.
The properties and performance of a ceramic component is determined by a combination of the materials from which it was fabricated and how it was processed. Most ceramic components are manufactured by dry pressing a powder/binder system in which the organic binder provides formability and green compact strength. A key step in this manufacturing process is the removal of the binder from the powder compact after pressing. The organic binder is typically removed by a thermal decomposition process in which heating rate, temperature, and time are the key process parameters. Empirical approaches are generally used to design the burnout time-temperaturemore » cycle, often resulting in excessive processing times and energy usage, and higher overall manufacturing costs. Ideally, binder burnout should be completed as quickly as possible without damaging the compact, while using a minimum of energy. Process and computational modeling offer one means to achieve this end. The objective of this study is to develop an experimentally validated computer model that can be used to better understand, control, and optimize binder burnout from green ceramic compacts.« less
Mechanism and experimental research on ultra-precision grinding of ferrite
NASA Astrophysics Data System (ADS)
Ban, Xinxing; Zhao, Huiying; Dong, Longchao; Zhu, Xueliang; Zhang, Chupeng; Gu, Yawen
2017-02-01
Ultra-precision grinding of ferrite is conducted to investigate the removal mechanism. Effect of the accuracy of machine tool key components on grinding surface quality is analyzed. The surface generation model of ferrite ultra-precision grinding machining is established. In order to reveal the surface formation mechanism of ferrite in the process of ultraprecision grinding, furthermore, the scientific and accurate of the calculation model are taken into account to verify the grinding surface roughness, which is proposed. Orthogonal experiment is designed using the high precision aerostatic turntable and aerostatic spindle for ferrite which is a typical hard brittle materials. Based on the experimental results, the influence factors and laws of ultra-precision grinding surface of ferrite are discussed through the analysis of the surface roughness. The results show that the quality of ferrite grinding surface is the optimal parameters, when the wheel speed of 20000r/mm, feed rate of 10mm/min, grinding depth of 0.005mm, and turntable rotary speed of 5r/min, the surface roughness Ra can up to 75nm.
NASA Astrophysics Data System (ADS)
Machado, Kelly; Zanghi, Didier; Sarou-Kanian, Vincent; Cadars, Sylvian; Burbano, Mario; Salanne, Mathieu; Bessada, Catherine
In aluminum production, the electrolyte is a molten fluorides mixture typically around 1000°C. In order to have a better understanding of the industrial process, it is necessary to have a model which will describe the molten salts on a wide range of compositions and temperatures, to accurately cover all the combinations that may be encountered in an operating electrolysis vessel. The aim of this study is to describe the speciation in the electrolyte in terms of anionic species in the bulk materials far from electrodes. To determine the speciation in situ at high temperature in the absence of an electrical field, we develop an original approach combining experimental methods such as Nuclear Magnetic Resonance spectroscopy (NMR) at high temperature with Molecular Dynamics (MD) simulation coupled with first principle calculations based on Density Functional Theory (DFT). This approach allows the calculation of NMR parameters and the comparison with the experimental ones. It will be provide an additional validation and constraint of the model used for MD. We test this approach on the model NaF-AlF3 system.
Werley, Michael S; Jerome, Ann M; DeSoi, Darren J; Coggins, Christopher R E; Oldham, Michael J; McKinney, Willie J
2013-01-01
To comply with state requirements, cigarette manufacturers have added low-permeability bands to the cigarette paper. These bands can extinguish the cigarette when it is no longer being puffed by a smoker. This study was conducted to evaluate the toxicology resulting from the addition of different types of bands to experimental cigarettes. A battery of assays that are typically used in toxicology studies with cigarette smoke, namely smoke chemistry, in vitro mutagenicity and cytotoxicity, and inhalation studies with rats, were used to evaluate different band characteristics added to cigarette paper. Although differences in the amount of band material was associated with an increase in some metals measured in mainstream tobacco smoke, it was not dose responsive to any band design parameter (base paper permeability, band width, band spacing, band chalk amount, or citrate). Occasional, minor differences were produced by the different types of bands; overall, there was no increased toxicity. Although there were increases and decreases in some mainstream smoke constituents, the in vitro and in vivo testing performed demonstrated that low-permeability bands on cigarettes do not modify the toxicity of smoke inhaled by smokers.
NASA Astrophysics Data System (ADS)
Krylov, Viacheslav V.; Zotov, Oleg D.; Klain, Boris I.; Ushakova, Natalia V.; Kantserova, Nadezhda P.; Znobisheva, Anna V.; Izyumov, Yuri G.; Kuz'mina, Victoria V.; Morozov, Alexey A.; Lysenko, Liudmila A.; Nemova, Nina N.; Osipova, Elena A.
2014-04-01
Naturally occurring geomagnetic storms have been shown to correlate with changes in organisms' biological processes. Changes in the geomagnetic field during a geomagnetic storm are complex and contain both slow changes of the geomagnetic field with frequencies of up to 0.001 Hz, and various geomagnetic pulsations observed in general to be within the range of 0.001-5 Hz. Little is known about what frequency constituent of geomagnetic storms has the strongest effect on living organisms. This paper uses an experimental approach to demonstrate that organisms from different taxa principally respond to slow changes of the geomagnetic field corresponding with the main phase and the initial period of the recovery phase of a geomagnetic storm. Pc1 type pulsations, which are commonly regarded as biologically effective elements of geomagnetic disturbances, did not affect controlled parameters in our experiments. This paper may serve as a starting point for a thorough inquiry into the influence of slow fluctuations of the geomagnetic field on organisms.
Speech rate and fluency in children with phonological disorder.
Novaes, Priscila Maronezi; Nicolielo-Carrilho, Ana Paola; Lopes-Herrera, Simone Aparecida
2015-01-01
To identify and describe the speech rate and fluency of children with phonological disorder (PD) with and without speech-language therapy. Thirty children, aged 5-8 years old, both genders, were divided into three groups: experimental group 1 (G1) — 10 children with PD in intervention; experimental group 2 (G2) — 10 children with PD without intervention; and control group (CG) — 10 children with typical development. Speech samples were collected and analyzed according to parameters of specific protocol. The children in CG had higher number of words per minute compared to those in G1, which, in turn, performed better in this aspect compared to children in G2. Regarding the number of syllables per minute, the CG showed the best result. In this aspect, the children in G1 showed better results than those in G2. Comparing children's performance in the assessed groups regarding the tests, those with PD in intervention had higher time of speech sample and adequate speech rate, which may be indicative of greater auditory monitoring of their own speech as a result of the intervention.
Ion extraction capabilities of two-grid accelerator systems. M.S. Thesis
NASA Technical Reports Server (NTRS)
Rovang, D. C.; Wilbur, P. J.
1984-01-01
An experimental investigation into the ion extraction capabilities of two-grid accelerator systems common to electrostatic ion thrusters is described. This work resulted in a large body of experimental data which facilitates the selection of the accelerator system geometries and operating parameters necessary to maximize the extracted ion current. Results suggest that the impingement-limited perveance is not dramatically affected by reductions in screen hole diameter to 0.5 mm. Impingement-limited performance is shown to depend most strongly on grid separation distance, accelerator hole diameter ratio, the discharge-to-total accelerating voltage ratio, and the net-to-total accelerating voltage ratio. Results obtained at small grid separation ratios suggest a new grid operating condition where high beam current per hole levels are achieved at a specified net accelerating voltage. It is shown that this operating condition is realized at an optimum ratio of net-to-total accelerating voltage ratio which is typically quite high. The apparatus developed for this study is also shown to be well suited measuring the electron backstreaming and electrical breakdown characteristics of two-grid accelerator systems.
Speaker gender identification based on majority vote classifiers
NASA Astrophysics Data System (ADS)
Mezghani, Eya; Charfeddine, Maha; Nicolas, Henri; Ben Amar, Chokri
2017-03-01
Speaker gender identification is considered among the most important tools in several multimedia applications namely in automatic speech recognition, interactive voice response systems and audio browsing systems. Gender identification systems performance is closely linked to the selected feature set and the employed classification model. Typical techniques are based on selecting the best performing classification method or searching optimum tuning of one classifier parameters through experimentation. In this paper, we consider a relevant and rich set of features involving pitch, MFCCs as well as other temporal and frequency-domain descriptors. Five classification models including decision tree, discriminant analysis, nave Bayes, support vector machine and k-nearest neighbor was experimented. The three best perming classifiers among the five ones will contribute by majority voting between their scores. Experimentations were performed on three different datasets spoken in three languages: English, German and Arabic in order to validate language independency of the proposed scheme. Results confirm that the presented system has reached a satisfying accuracy rate and promising classification performance thanks to the discriminating abilities and diversity of the used features combined with mid-level statistics.
MICROANALYSIS OF MATERIALS USING SYNCHROTRON RADIATION.
DOE Office of Scientific and Technical Information (OSTI.GOV)
JONES,K.W.; FENG,H.
2000-12-01
High intensity synchrotron radiation produces photons with wavelengths that extend from the infrared to hard x rays with energies of hundreds of keV with uniquely high photon intensities that can be used to determine the composition and properties of materials using a variety of techniques. Most of these techniques represent extensions of earlier work performed with ordinary tube-type x-ray sources. The properties of the synchrotron source such as the continuous range of energy, high degree of photon polarization, pulsed beams, and photon flux many orders of magnitude higher than from x-ray tubes have made possible major advances in the possiblemore » chemical applications. We describe here ways that materials analyses can be made using the high intensity beams for measurements with small beam sizes and/or high detection sensitivity. The relevant characteristics of synchrotron x-ray sources are briefly summarized to give an idea of the x-ray parameters to be exploited. The experimental techniques considered include x-ray fluorescence, absorption, and diffraction. Examples of typical experimental apparatus used in these experiments are considered together with descriptions of actual applications.« less
Collective action problem in heterogeneous groups
Gavrilets, Sergey
2015-01-01
I review the theoretical and experimental literature on the collective action problem in groups whose members differ in various characteristics affecting individual costs, benefits and preferences in collective actions. I focus on evolutionary models that predict how individual efforts and fitnesses, group efforts and the amount of produced collective goods depend on the group's size and heterogeneity, as well as on the benefit and cost functions and parameters. I consider collective actions that aim to overcome the challenges from nature or win competition with neighbouring groups of co-specifics. I show that the largest contributors towards production of collective goods will typically be group members with the highest stake in it or for whom the effort is least costly, or those who have the largest capability or initial endowment. Under some conditions, such group members end up with smaller net pay-offs than the rest of the group. That is, they effectively behave as altruists. With weak nonlinearity in benefit and cost functions, the group effort typically decreases with group size and increases with within-group heterogeneity. With strong nonlinearity in benefit and cost functions, these patterns are reversed. I discuss the implications of theoretical results for animal behaviour, human origins and psychology. PMID:26503689
A latest developed all permanent magnet ECRIS for atomic physics research at IMP
DOE Office of Scientific and Technical Information (OSTI.GOV)
Sun, L.T.; Zhao, H.W.; Zhang, Z.M.
2006-03-15
Electron cyclotron resonance (ECR) ion sources have been used for atomic physics research for a long time. With the development of atomic physics research in the Institute of Modern Physics (IMP), additional high performance experimental facilities are required. A 300 kV high voltage (HV) platform has been under construction since 2003, and an all permanent magnet ECR ion source is supposed to be put on the platform. Lanzhou all permanent magnet ECR ion source No. 2 (LAPECR2) is a latest developed all permanent magnet ECRIS. It is a 900 kg weight and null-set 650 mmx562 mm outer dimension (magnetic body)more » ion source. The injection magnetic field of the source is 1.28 T and the extraction magnetic field is 1.07 T. This source is designed to be running at 14.5 GHz. The high magnetic field inside the plasma chamber enables the source to give good performances at 14.5 GHz. LAPECR2 source is now under commissioning in IMP. In this article, the typical parameters of the source LAPECR2 are listed, and the typical results of the preliminary commissioning are presented.« less
NASA Astrophysics Data System (ADS)
Rapoport, B. I.; Pavlenko, I.; Weyssow, B.; Carati, D.
2002-11-01
Recent studies of ion and electron transport indicate that the safety factor profile, q(r), affects internal transport barrier (ITB) formation in magnetic confinement devices [1, 2]. These studies are consistent with experimental observations that low shear suppresses magnetic island interaction and associated stochasticity when the ITB is formed [3]. In this sense the position and quality of the ITB depend on the stochasticity of the magnetic field, and can be controlled by q(r). This study explores effects of the q-profile on magnetic field stochasticity using two-dimensional mapping techniques. Q-profiles typical of ITB experiments are incorporated into Hamiltonian maps to investigate the relation between magnetic field stochasticity and ITB parameters predicted by other models. It is shown that the mapping technique generates results consistent with these predictions, and suggested that Hamiltonian mappings can be useful as simple and computationally inexpensive approximation methods for describing the magnetic field in ITB experiments. 1. I. Voitsekhovitch et al. 29th EPS Conference on Plasma Physics and Controlled Fusion (2002). O-4.04. 2. G.M.D. Hogeweij et al. Nucl. Fusion. 38 (1998): 1881. 3. K.A. Razumova et al. Plasma Phys. Contr. Fusion. 42 (2000): 973.
Time-Dependent Behavior of Diabase and a Nonlinear Creep Model
NASA Astrophysics Data System (ADS)
Yang, Wendong; Zhang, Qiangyong; Li, Shucai; Wang, Shugang
2014-07-01
Triaxial creep tests were performed on diabase specimens from the dam foundation of the Dagangshan hydropower station, and the typical characteristics of creep curves were analyzed. Based on the test results under different stress levels, a new nonlinear visco-elasto-plastic creep model with creep threshold and long-term strength was proposed by connecting an instantaneous elastic Hooke body, a visco-elasto-plastic Schiffman body, and a nonlinear visco-plastic body in series mode. By introducing the nonlinear visco-plastic component, this creep model can describe the typical creep behavior, which includes the primary creep stage, the secondary creep stage, and the tertiary creep stage. Three-dimensional creep equations under constant stress conditions were deduced. The yield approach index (YAI) was used as the criterion for the piecewise creep function to resolve the difficulty in determining the creep threshold value and the long-term strength. The expression of the visco-plastic component was derived in detail and the three-dimensional central difference form was given. An example was used to verify the credibility of the model. The creep parameters were identified, and the calculated curves were in good agreement with the experimental curves, indicating that the model is capable of replicating the physical processes.
Energy dissipation in quasi-linear viscoelastic tissues, cells, and extracellular matrix.
Babaei, Behzad; Velasquez-Mao, A J; Pryse, Kenneth M; McConnaughey, William B; Elson, Elliot L; Genin, Guy M
2018-05-21
Characterizing how a tissue's constituents give rise to its viscoelasticity is important for uncovering how hidden timescales underlie multiscale biomechanics. These constituents are viscoelastic in nature, and their mechanics must typically be assessed from the uniaxial behavior of a tissue. Confounding the challenge is that tissue viscoelasticity is typically associated with nonlinear elastic responses. Here, we experimentally assessed how fibroblasts and extracellular matrix (ECM) within engineered tissue constructs give rise to the nonlinear viscoelastic responses of a tissue. We applied a constant strain rate, "triangular-wave" loading and interpreted responses using the Fung quasi-linear viscoelastic (QLV) material model. Although the Fung QLV model has several well-known weaknesses, it was well suited to the behaviors of the tissue constructs, cells, and ECM tested. Cells showed relatively high damping over certain loading frequency ranges. Analysis revealed that, even in cases where the Fung QLV model provided an excellent fit to data, the the time constant derived from the model was not in general a material parameter. Results have implications for design of protocols for the mechanical characterization of biological materials, and for the mechanobiology of cells within viscoelastic tissues. Copyright © 2018. Published by Elsevier Ltd.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Pestehe, S. J., E-mail: sjpest@tabrizu.ac.ir; Mohammadnejad, M.; Research Institute for Applied Physics and Astronomy, University of Tabriz, Tabriz
A theoretical model is developed to study the signals from a typical dynamic Faraday cup, and using this model the output signals from this structure are obtained. A detailed discussion on the signal structure, using different experimental conditions, is also given. It is argued that there is a possibility of determining the total charge of the generated ion pulse, the maximum velocity of the ions, ion velocity distribution, and the number of ion species for mixed working gases, under certain conditions. In addition, the number of different ionization stages, the number of different pinches in one shot, and the numbermore » of different existing acceleration mechanisms can also be determined provided that the mentioned conditions being satisfied. An experiment is carried out on the Filippov type 90 kJ Sahand plasma focus using Ar as the working gas at the pressure of 0.25 Torr. The data from a typical shot are fitted to a signal from the model and the total charge of the related energetic ion pulse is deduced using the values of the obtained fit parameters. Good agreement between the obtained amount of the total charge and the values obtained during other experiments on the same plasma focus device is observed.« less
Truong, Thang; Boshra, Hani; Embury-Hyatt, Carissa; Nfon, Charles; Gerdts, Volker; Tikoo, Suresh; Babiuk, Lorne A.; Kara, Pravesh; Chetty, Thireshni; Mather, Arshad; Wallace, David B.; Babiuk, Shawn
2014-01-01
Peste des petits ruminants (PPR) is a viral disease which primarily affects small ruminants, causing significant economic losses for the livestock industry in developing countries. It is endemic in Saharan and sub-Saharan Africa, the Middle East and the Indian sub-continent. The primary hosts for peste des petits ruminants virus (PPRV) are goats and sheep; however recent models studying the pathology, disease progression and viremia of PPRV have focused primarily on goat models. This study evaluates the tissue tropism and pathogenesis of PPR following experimental infection of sheep and goats using a quantitative time-course study. Upon infection with a virulent strain of PPRV, both sheep and goats developed clinical signs and lesions typical of PPR, although sheep displayed milder clinical disease compared to goats. Tissue tropism of PPRV was evaluated by real-time RT-PCR and immunohistochemistry. Lymph nodes, lymphoid tissue and digestive tract organs were the predominant sites of virus replication. The results presented in this study provide models for the comparative evaluation of PPRV pathogenesis and tissue tropism in both sheep and goats. These models are suitable for the establishment of experimental parameters necessary for the evaluation of vaccines, as well as further studies into PPRV-host interactions. PMID:24498032
Moored offshore structures - evaluation of forces in elastic mooring lines
NASA Astrophysics Data System (ADS)
Crudu, L.; Obreja, D. C.; Marcu, O.
2016-08-01
In most situations, the high frequency motions of the floating structure induce important effects in the mooring lines which affect also the motions of the structure. The experience accumulated during systematic experimental tests and calculations, carried out for different moored floating structures, showed a complex influence of various parameters on the dynamic effects. Therefore, it was considered that a systematic investigation is necessary. Due to the complexity of hydrodynamics aspects of offshore structures behaviour, experimental tests are practically compulsory in order to be able to properly evaluate and then to validate their behaviour in real sea. Moreover the necessity to carry out hydrodynamic tests is often required by customers, classification societies and other regulatory bodies. Consequently, the correct simulation of physical properties of the complex scaled models becomes a very important issue. The paper is investigating such kind of problems identifying the possible simplification, generating different approaches. One of the bases of the evaluation has been found consideringtheresults of systematic experimental tests on the dynamic behaviour of a mooring chain reproduced at five different scales. Dynamic effects as well as the influences of the elasticity simulation for 5 different scales are evaluated together. The paper presents systematic diagrams and practical results for a typical moored floating structure operating as pipe layer based on motion evaluations and accelerations in waves.
Truong, Thang; Boshra, Hani; Embury-Hyatt, Carissa; Nfon, Charles; Gerdts, Volker; Tikoo, Suresh; Babiuk, Lorne A; Kara, Pravesh; Chetty, Thireshni; Mather, Arshad; Wallace, David B; Babiuk, Shawn
2014-01-01
Peste des petits ruminants (PPR) is a viral disease which primarily affects small ruminants, causing significant economic losses for the livestock industry in developing countries. It is endemic in Saharan and sub-Saharan Africa, the Middle East and the Indian sub-continent. The primary hosts for peste des petits ruminants virus (PPRV) are goats and sheep; however recent models studying the pathology, disease progression and viremia of PPRV have focused primarily on goat models. This study evaluates the tissue tropism and pathogenesis of PPR following experimental infection of sheep and goats using a quantitative time-course study. Upon infection with a virulent strain of PPRV, both sheep and goats developed clinical signs and lesions typical of PPR, although sheep displayed milder clinical disease compared to goats. Tissue tropism of PPRV was evaluated by real-time RT-PCR and immunohistochemistry. Lymph nodes, lymphoid tissue and digestive tract organs were the predominant sites of virus replication. The results presented in this study provide models for the comparative evaluation of PPRV pathogenesis and tissue tropism in both sheep and goats. These models are suitable for the establishment of experimental parameters necessary for the evaluation of vaccines, as well as further studies into PPRV-host interactions.
Jaskolla, Thorsten W; Karas, Michael
2011-06-01
This work experimentally verifies and proves the two long since postulated matrix-assisted laser desorption/ionization (MALDI) analyte protonation pathways known as the Lucky Survivor and the gas phase protonation model. Experimental differentiation between the predicted mechanisms becomes possible by the use of deuterated matrix esters as MALDI matrices, which are stable under typical sample preparation conditions and generate deuteronated reagent ions, including the deuterated and deuteronated free matrix acid, only upon laser irradiation in the MALDI process. While the generation of deuteronated analyte ions proves the gas phase protonation model, the detection of protonated analytes by application of deuterated matrix compounds without acidic hydrogens proves the survival of analytes precharged from solution in accordance with the predictions from the Lucky Survivor model. The observed ratio of the two analyte ionization processes depends on the applied experimental parameters as well as the nature of analyte and matrix. Increasing laser fluences and lower matrix proton affinities favor gas phase protonation, whereas more quantitative analyte protonation in solution and intramolecular ion stabilization leads to more Lucky Survivors. The presented results allow for a deeper understanding of the fundamental processes causing analyte ionization in MALDI and may alleviate future efforts for increasing the analyte ion yield.
Quantitative comparison of PZT and CMUT probes for photoacoustic imaging: Experimental validation.
Vallet, Maëva; Varray, François; Boutet, Jérôme; Dinten, Jean-Marc; Caliano, Giosuè; Savoia, Alessandro Stuart; Vray, Didier
2017-12-01
Photoacoustic (PA) signals are short ultrasound (US) pulses typically characterized by a single-cycle shape, often referred to as N-shape. The spectral content of such wideband signals ranges from a few hundred kilohertz to several tens of megahertz. Typical reception frequency responses of classical piezoelectric US imaging transducers, based on PZT technology, are not sufficiently broadband to fully preserve the entire information contained in PA signals, which are then filtered, thus limiting PA imaging performance. Capacitive micromachined ultrasonic transducers (CMUT) are rapidly emerging as a valid alternative to conventional PZT transducers in several medical ultrasound imaging applications. As compared to PZT transducers, CMUTs exhibit both higher sensitivity and significantly broader frequency response in reception, making their use attractive in PA imaging applications. This paper explores the advantages of the CMUT larger bandwidth in PA imaging by carrying out an experimental comparative study using various CMUT and PZT probes from different research laboratories and manufacturers. PA acquisitions are performed on a suture wire and on several home-made bimodal phantoms with both PZT and CMUT probes. Three criteria, based on the evaluation of pure receive impulse response, signal-to-noise ratio (SNR) and contrast-to-noise ratio (CNR) respectively, have been used for a quantitative comparison of imaging results. The measured fractional bandwidths of the CMUT arrays are larger compared to PZT probes. Moreover, both SNR and CNR are enhanced by at least 6 dB with CMUT technology. This work highlights the potential of CMUT technology for PA imaging through qualitative and quantitative parameters.
42. ARAIII Prototype assembly and evaluation building ARA630 interior. Typical ...
42. ARA-III Prototype assembly and evaluation building ARA-630 interior. Typical view room partitions. Ineel photo no. 3-28. - Idaho National Engineering Laboratory, Army Reactors Experimental Area, Scoville, Butte County, ID
Effect of processing parameters on FDM process
NASA Astrophysics Data System (ADS)
Chari, V. Srinivasa; Venkatesh, P. R.; Krupashankar, Dinesh, Veena
2018-04-01
This paper focused on the process parameters on fused deposition modeling (FDM). Infill, resolution, temperature are the process variables considered for experimental studies. Compression strength, Hardness test microstructure are the outcome parameters, this experimental study done based on the taguchi's L9 orthogonal array is used. Taguchi array used to build the 9 different models and also to get the effective output results on the under taken parameters. The material used for this experimental study is Polylactic Acid (PLA).
von Hansen, Yann; Mehlich, Alexander; Pelz, Benjamin; Rief, Matthias; Netz, Roland R
2012-09-01
The thermal fluctuations of micron-sized beads in dual trap optical tweezer experiments contain complete dynamic information about the viscoelastic properties of the embedding medium and-if present-macromolecular constructs connecting the two beads. To quantitatively interpret the spectral properties of the measured signals, a detailed understanding of the instrumental characteristics is required. To this end, we present a theoretical description of the signal processing in a typical dual trap optical tweezer experiment accounting for polarization crosstalk and instrumental noise and discuss the effect of finite statistics. To infer the unknown parameters from experimental data, a maximum likelihood method based on the statistical properties of the stochastic signals is derived. In a first step, the method can be used for calibration purposes: We propose a scheme involving three consecutive measurements (both traps empty, first one occupied and second empty, and vice versa), by which all instrumental and physical parameters of the setup are determined. We test our approach for a simple model system, namely a pair of unconnected, but hydrodynamically interacting spheres. The comparison to theoretical predictions based on instantaneous as well as retarded hydrodynamics emphasizes the importance of hydrodynamic retardation effects due to vorticity diffusion in the fluid. For more complex experimental scenarios, where macromolecular constructs are tethered between the two beads, the same maximum likelihood method in conjunction with dynamic deconvolution theory will in a second step allow one to determine the viscoelastic properties of the tethered element connecting the two beads.
Scintillation light from cosmic-ray muons in liquid argon
DOE Office of Scientific and Technical Information (OSTI.GOV)
Whittington, Denver Wade; Mufson, S.; Howard, B.
2016-05-01
This paper reports the results of an experiment to directly measure the time-resolved scintillation signal from the passage of cosmic-ray muons through liquid argon. Scintillation light from these muons is of value to studies of weakly-interacting particles in neutrino experiments and dark matter searches. The experiment was carried out at the TallBo dewar facility at Fermilab using prototype light guide detectors and electronics developed for the Deep Underground Neutrino Experiment. Two models are presented for the time structure of the scintillation light, a phenomenological model and a physically-motivated model. Both models find tT = 1:52 ms for the decay timemore » constant of the Ar 2 triplet state. These models also show that the identification of the “early” light fraction in the phenomenological model, FE 25% of the signal, with the total light from singlet decays is an underestimate. The total fraction of singlet light is FS 36%, where the increase over FE is from singlet light emitted by the wavelength shifter through processes with long decay constants. The models were further used to compute the experimental particle identification parameter Fprompt, the fraction of light coming in a short time window after the trigger compared with the light in the total recorded waveform. The models reproduce quite well the typical experimental value 0.3 found by dark matter and double b-decay experiments, which suggests this parameter provides a robust metric for discriminating electrons and muons from more heavily ionizing particles.« less
Andrzejewska, Anna; Kaczmarski, Krzysztof; Guiochon, Georges
2009-02-13
The adsorption isotherms of selected compounds are our main source of information on the mechanisms of adsorption processes. Thus, the selection of the methods used to determine adsorption isotherm data and to evaluate the errors made is critical. Three chromatographic methods were evaluated, frontal analysis (FA), frontal analysis by characteristic point (FACP), and the pulse or perturbation method (PM), and their accuracies were compared. Using the equilibrium-dispersive (ED) model of chromatography, breakthrough curves of single components were generated corresponding to three different adsorption isotherm models: the Langmuir, the bi-Langmuir, and the Moreau isotherms. For each breakthrough curve, the best conventional procedures of each method (FA, FACP, PM) were used to calculate the corresponding data point, using typical values of the parameters of each isotherm model, for four different values of the column efficiency (N=500, 1000, 2000, and 10,000). Then, the data points were fitted to each isotherm model and the corresponding isotherm parameters were compared to those of the initial isotherm model. When isotherm data are derived with a chromatographic method, they may suffer from two types of errors: (1) the errors made in deriving the experimental data points from the chromatographic records; (2) the errors made in selecting an incorrect isotherm model and fitting to it the experimental data. Both errors decrease significantly with increasing column efficiency with FA and FACP, but not with PM.
Application of Low-Cost Fixed-Wing UAV for Inland Lakes Shoreline Investigation
NASA Astrophysics Data System (ADS)
Templin, Tomasz; Popielarczyk, Dariusz; Kosecki, Rafał
2017-10-01
One of the most important factors that influences the performance of geomorphologic parameters on urban lakes is the water level. It fluctuates periodically, causing shoreline changes. It is especially significant for typical environmental studies like bathymetric surveys, morphometric parameters calculation, sediment depth changes, thermal structure, water quality monitoring, etc. In most reservoirs, it can be obtained from digitized historical maps or plans or directly measured using the instruments such as: geodetic total station, GNSS receivers, UAV with different sensors, satellite and aerial photos, terrestrial and airborne light detection and ranging, or others. Today one of the most popular measuring platforms, increasingly applied in many applications is UAV. Unmanned aerial system can be a cheap, easy to use, on-demand technology for gathering remote sensing data. Our study presents a reliable methodology for shallow lake shoreline investigation with the use of a low-cost fixed-wing UAV system. The research was implemented on a small, eutrophic urban inland reservoir located in the northern part of Poland—Lake Suskie. The geodetic TS, and RTK/GNSS measurements, hydroacoustic soundings and experimental aerial mapping were conducted by the authors in 2012-2015. The article specifically describes the UAV system used for experimental measurements, the obtained results and the accuracy analysis. Final conclusions demonstrate that even a low-cost fixed-wing UAV can provide an excellent tool for accurately surveying a shallow lake shoreline and generate valuable geoinformation data collected definitely faster than when traditional geodetic methods are employed.
Shrinking microbubbles with microfluidics: mathematical modelling to control microbubble sizes.
Salari, A; Gnyawali, V; Griffiths, I M; Karshafian, R; Kolios, M C; Tsai, S S H
2017-11-29
Microbubbles have applications in industry and life-sciences. In medicine, small encapsulated bubbles (<10 μm) are desirable because of their utility in drug/oxygen delivery, sonoporation, and ultrasound diagnostics. While there are various techniques for generating microbubbles, microfluidic methods are distinguished due to their precise control and ease-of-fabrication. Nevertheless, sub-10 μm diameter bubble generation using microfluidics remains challenging, and typically requires expensive equipment and cumbersome setups. Recently, our group reported a microfluidic platform that shrinks microbubbles to sub-10 μm diameters. The microfluidic platform utilizes a simple microbubble-generating flow-focusing geometry, integrated with a vacuum shrinkage system, to achieve microbubble sizes that are desirable in medicine, and pave the way to eventual clinical uptake of microfluidically generated microbubbles. A theoretical framework is now needed to relate the size of the microbubbles produced and the system's input parameters. In this manuscript, we characterize microbubbles made with various lipid concentrations flowing in solutions that have different interfacial tensions, and monitor the changes in bubble size along the microfluidic channel under various vacuum pressures. We use the physics governing the shrinkage mechanism to develop a mathematical model that predicts the resulting bubble sizes and elucidates the dominant parameters controlling bubble sizes. The model shows a good agreement with the experimental data, predicting the resulting microbubble sizes under different experimental input conditions. We anticipate that the model will find utility in enabling users of the microfluidic platform to engineer bubbles of specific sizes.
Substantial Integration of Typical Educational Games into Extended Curricula
ERIC Educational Resources Information Center
Clark, Douglas B.; Tanner-Smith, Emily; Hostetler, Andrew; Fradkin, Aryah; Polikov, Vadim
2018-01-01
Much research focuses on what might be possible with digital games in the classroom. This study focuses on what is currently probable and typical. It uses a controlled quasi-experimental design to compare outcomes for students of 13 teachers in 10 diverse urban, suburban, and rural schools. The teachers integrated a set of 55 typical educational…
Selection of meteorological conditions to apply in an Ecotron facility
NASA Astrophysics Data System (ADS)
Leemans, Vincent; De Cruz, Lesley; Dumont, Benjamin; Hamdi, Rafiq; Delaplace, Pierre; Heinesh, Bernard; Garré, Sarah; Verheggen, François; Theodorakopoulos, Nicolas; Longdoz, Bernard
2017-04-01
This presentation aims to propose a generic method to produce meteorological input data that is useful for climate research infrastructures such as an Ecotron, where researchers will face the need to generate representative actual or future climatic conditions. Depending on the experimental objectives and the research purposes, typical conditions or more extreme values such as dry or wet climatic scenarios might be requested. Four variables were considered here, the near-surface air temperature, the near-surface relative humidity, the cloud cover and precipitation. The meteorological datasets, among which a specific meteorological year can be picked up, are produced by the ALARO-0 model from the RMIB (Royal Meteorological Institute of Belgium). Two future climate scenarios (RCP 4.5 and 8.5) and two time periods (2041-2070 and 2071-2100) were used as well as a historical run of the model (1981-2010) which is used as a reference. When the data from a historical run were compared to the observed historical data, biases were noticed. A linear correction was proposed for all the variables except for precipitation, for which a non-linear correction (using a power function) was chosen to maintain a zero-precipitation occurrences. These transformations were able to remove most of the differences between the observed and historical run of the model for the means and for the standard deviations. For the relative humidity, because of non-linearities, only one half of the average bias was corrected and a different path might have to be chosen. For the selection of a meteorological year, a position and a dispersion parameter have been proposed to characterise each meteorological year for each variable. For precipitation, a third parameter quantifying the importance of dry and wet periods has been defined. In order to select a specific climate, for each of these nine parameters the experimenter should provide a percentile and a weight to prioritize the importance of each variable in the process of a global climate selection. The proposed algorithm computed the weighted distance for each year between the parameters and the point representing the position of the percentile in the nine-dimensional space. The five closest values were then selected and represented in different graphs. The proposed method is able to provide a decision aid in the selection of the meteorological conditions to be generated within an Ecotron. However, with a limited number of years available in each case (thirty years for each RCP and each time period), there is no perfect match and the ultimate trade-off will be the responsibility of the researcher. For typical years, close to the median, the relative frequency is higher and the trade-off is more easy than for more extreme years where the relative frequency is low.
Self-powered electrospinning apparatus based on a hand-operated Wimshurst generator
NASA Astrophysics Data System (ADS)
Han, Wen-Peng; Huang, Yuan-Yuan; Yu, Miao; Zhang, Jun-Cheng; Yan, Xu; Yu, Gui-Feng; Zhang, Hong-Di; Yan, Shi-Ying; Long, Yun-Ze
2015-03-01
A conventional electrospinning setup cannot work without a plug (electricity supply). In this article, we report a self-powered electrospinning setup based on a hand-operated Wimshurst generator. The new device has better applicability and portability than a typical conventional electrospinning setup because it is lightweight and can work without an external power supply. Experimental parameters of the apparatus such as the minimum number of handle turns to generate enough energy to spin, rotation speed of the handle and electrospinning distance were investigated. Different polymers such as polystyrene (PS), poly(vinylidene fluoride) (PVDF), polycaprolactone (PCL) and polylactic acid (PLA) were electrospun into ultrathin fibers successfully by this apparatus. The stability, reliability, and repeatability of the new apparatus demonstrate that it can be used as not only a demonstrator for an electrospinning process, but also a beneficial complement to conventional electrospinning especially where or when without a power supply, and may be used in wound healing and rapid hemostasis, etc.A conventional electrospinning setup cannot work without a plug (electricity supply). In this article, we report a self-powered electrospinning setup based on a hand-operated Wimshurst generator. The new device has better applicability and portability than a typical conventional electrospinning setup because it is lightweight and can work without an external power supply. Experimental parameters of the apparatus such as the minimum number of handle turns to generate enough energy to spin, rotation speed of the handle and electrospinning distance were investigated. Different polymers such as polystyrene (PS), poly(vinylidene fluoride) (PVDF), polycaprolactone (PCL) and polylactic acid (PLA) were electrospun into ultrathin fibers successfully by this apparatus. The stability, reliability, and repeatability of the new apparatus demonstrate that it can be used as not only a demonstrator for an electrospinning process, but also a beneficial complement to conventional electrospinning especially where or when without a power supply, and may be used in wound healing and rapid hemostasis, etc. Electronic supplementary information (ESI) available: The video of the electrospinning process by this new self-powered electrospinning apparatus and the vivid details were recorded by a high-speed digital video camera. See DOI: 10.1039/c5nr00387c
NASA Astrophysics Data System (ADS)
Xie, Weichang; Hagemeier, Sebastian; Bischoff, Jörg; Mastylo, Rostyslav; Manske, Eberhard; Lehmann, Peter
2017-06-01
Optical profilers are mature instruments used in research and industry to study surface topography features. Although the corresponding standards are based on simple step height measurements, in practical applications these instruments are often used to study the fidelity of surface topography. In this context it is well-known that in certain situations a surface profile obtained by an optical profiler will differ from the real profile. With respect to practical applications such deviations often occur in the vicinity of steep walls and in cases of high aspect ratio. In this contribution we compare the transfer characteristics of different 3D optical profiler principles, namely white-light interferometry, focus sensing, and confocal microscopy. Experimental results demonstrate that the transfer characteristics do not only depend on the parameters of the optical measurement system (e. g. wavelength and coherence of light, numerical aperture, evaluated signal feature, polarization) but also on the properties of the measuring object such as step height, aspect ratio, material properties and homogeneity, rounding and steepness of the edges, surface roughness. As a result, typical artefacts such as batwings occur for certain parameter combinations, particularly at certain height-to-wavelength ratio (HWR) values. Understanding of the mechanisms behind these phenomena enables to reduce them by an appropriate parameter adaption. However, it is not only the edge artefacts, but also the position of an edge that may be changed due to the properties of the measuring object. In order to investigate the relevant effects theoretically, several models are introduced. These are based on either an extension of Richards-Wolf modeling or rigorous coupled wave analysis (RCWA). Although these models explain the experimental effects quite well they suffer from different limitations, so that a quantitative correspondence of theoretical modeling and experimental results is hard to achieve. Nevertheless, these models are used to study the characteristics of the measured signals occurring at edges of different step height compared to signals occurring at plateaus. Moreover, a special calibration sample with continuous step height variation was developed to reduce the impact of unknown sample properties. We analyzed the signals in both, the spatial and the spatial frequency domain, and found systematic signal changes that will be discussed. As a consequence, these simulations will help to interpret measurement results appropriately and to improve them by proper parameter settings and calibration and finally to increase the edge detection accuracy.
SYNCHROTRON ORIGIN OF THE TYPICAL GRB BAND FUNCTION—A CASE STUDY OF GRB 130606B
DOE Office of Scientific and Technical Information (OSTI.GOV)
Zhang, Bin-Bin; Briggs, Michael S.; Uhm, Z. Lucas
2016-01-10
We perform a time-resolved spectral analysis of GRB 130606B within the framework of a fast-cooling synchrotron radiation model with magnetic field strength in the emission region decaying with time, as proposed by Uhm and Zhang. The data from all time intervals can be successfully fit by the model. The same data can be equally well fit by the empirical Band function with typical parameter values. Our results, which involve only minimal physical assumptions, offer one natural solution to the origin of the observed GRB spectra and imply that, at least some, if not all, Band-like GRB spectra with typical Bandmore » parameter values can indeed be explained by synchrotron radiation.« less
Reason, emotion and decision-making: risk and reward computation with feeling.
Quartz, Steven R
2009-05-01
Many models of judgment and decision-making posit distinct cognitive and emotional contributions to decision-making under uncertainty. Cognitive processes typically involve exact computations according to a cost-benefit calculus, whereas emotional processes typically involve approximate, heuristic processes that deliver rapid evaluations without mental effort. However, it remains largely unknown what specific parameters of uncertain decision the brain encodes, the extent to which these parameters correspond to various decision-making frameworks, and their correspondence to emotional and rational processes. Here, I review research suggesting that emotional processes encode in a precise quantitative manner the basic parameters of financial decision theory, indicating a reorientation of emotional and cognitive contributions to risky choice.
NASA Astrophysics Data System (ADS)
Gajewski, Andrzej; Kolenderski, Piotr L.
2016-10-01
There are several problems that must be solved in order to increase the distance of quantum communication protocols based on photons as an information carriers. One of them is the dispersion, whose effects can be minimized by engineering spectral properties of transmitted photons. In particular, it is expected that positively correlated photon pairs can be very useful. We present the full characterization of a source of single photon pairs at a telecom wavelength based on type II spontaneous parametric down conversion (SPDC) process in a beta-barium borate (BBO) crystal. In the type II process, a pump photon, which is polarized extraordinarily, splits in a nonlinear medium into signal and idler photons, which are polarized perpendicularly to each other. In order for the process to be efficient a phase matching condition must be fulfilled. These conditions originate from momentum and energy conservation rules and put severe restrictions on source parameters. Seemingly, these conditions force the photon pair to be negatively correlated in their spectral domain. However, it is possible to achieve positive correlation for pulsed pumping. The experimentally available degrees of freedom of a source are the width of the pumping beam, the collected modes' widths, the length of the nonlinear crystal and the duration of the pumping pulse. In our numerical model we use the following figures of merit: the pair production rate, the efficiency of photon coupling into a single mode fiber, the spectral correlation of the coupled photon pair. The last one is defined as the Pearson correlation parameter for a joint spectral distribution. The aim here is to find the largest positive spectral correlation and the highest coupling efficiency. By resorting to the numerical model Ref. [1] we showed in Ref. [2], that by careful adjustment of the pump's and the collected modes' characteristics, one can optimize any of the source's parameters. Our numerical outcomes conform to the experimental results presented in Refs [3,4]. Here we investigate typical, experimentally available source parameters: the widths of the pump beam and collected modes ranging from 20μm to 500m, the crystal length ranging from 1mm to 7.5mm while the pulse duration is set to 50fs, 100fs or 150fs. We achieve the correlation coefficient value as high as approximately 0.8, or - for different values of parameters - coupling efficiency equal to 0.76.
NASA Astrophysics Data System (ADS)
Muguercia, Ivan
Hazardous radioactive liquid waste is the legacy of more than 50 years of plutonium production associated with the United States' nuclear weapons program. It is estimated that more than 245,000 tons of nitrate wastes are stored at facilities such as the single-shell tanks (SST) at the Hanford Site in the state of Washington, and the Melton Valley storage tanks at Oak Ridge National Laboratory (ORNL) in Tennessee. In order to develop an innovative, new technology for the destruction and immobilization of nitrate-based radioactive liquid waste, the United State Department of Energy (DOE) initiated the research project which resulted in the technology known as the Nitrate to Ammonia and Ceramic (NAC) process. However, inasmuch as the nitrate anion is highly mobile and difficult to immobilize, especially in relatively porous cement-based grout which has been used to date as a method for the immobilization of liquid waste, it presents a major obstacle to environmental clean-up initiatives. Thus, in an effort to contribute to the existing body of knowledge and enhance the efficacy of the NAC process, this research involved the experimental measurement of the rheological and heat transfer behaviors of the NAC product slurry and the determination of the optimal operating parameters for the continuous NAC chemical reaction process. Test results indicate that the NAC product slurry exhibits a typical non-Newtonian flow behavior. Correlation equations for the slurry's rheological properties and heat transfer rate in a pipe flow have been developed; these should prove valuable in the design of a full-scale NAC processing plant. The 20-percent slurry exhibited a typical dilatant (shear thickening) behavior and was in the turbulent flow regime due to its lower viscosity. The 40-percent slurry exhibited a typical pseudoplastic (shear thinning) behavior and remained in the laminar flow regime throughout its experimental range. The reactions were found to be more efficient in the lower temperature range investigated. With respect to leachability, the experimental final NAC ceramic waste form is comparable to the final product of vitrification, the technology chosen by DOE to treat these wastes. As the NAC process has the potential of reducing the volume of nitrate-based radioactive liquid waste by as much as 70 percent, it not only promises to enhance environmental remediation efforts but also effect substantial cost savings.
Preserved reward outcome processing in ASD as revealed by event-related potentials.
McPartland, James C; Crowley, Michael J; Perszyk, Danielle R; Mukerji, Cora E; Naples, Adam J; Wu, Jia; Mayes, Linda C
2012-05-31
Problems with reward system function have been posited as a primary difficulty in autism spectrum disorders. The current study examined an electrophysiological marker of feedback monitoring, the feedback-related negativity (FRN), during a monetary reward task. The study advanced prior understanding by focusing exclusively on a developmental sample, applying rigorous diagnostic characterization and introducing an experimental paradigm providing more subtly different feedback valence (reward versus non-reward instead of reward versus loss). Twenty-six children with autism spectrum disorder and 28 typically developing peers matched on age and full-scale IQ played a guessing game resulting in monetary gain ("win") or neutral outcome ("draw"). ERP components marking early visual processing (N1, P2) and feedback appraisal (FRN) were contrasted between groups in each condition, and their relationships to behavioral measures of social function and dysfunction, social anxiety, and autism symptomatology were explored. FRN was observed on draw trials relative to win trials. Consistent with prior research, children with ASD exhibited a FRN to suboptimal outcomes that was comparable to typical peers. ERP parameters were unrelated to behavioral measures. Results of the current study indicate typical patterns of feedback monitoring in the context of monetary reward in ASD. The study extends prior findings of normative feedback monitoring to a sample composed exclusively of children and demonstrates that, as in typical development, individuals with autism exhibit a FRN to suboptimal outcomes, irrespective of neutral or negative valence. Results do not support a pervasive problem with reward system function in ASD, instead suggesting any dysfunction lies in more specific domains, such as social perception, or in response to particular feedback-monitoring contexts, such as self-evaluation of one's errors.
Jing, Nan; Li, Chuang; Chong, Yaqin
2017-01-20
An estimation method for indirectly observable parameters for a typical low dynamic vehicle (LDV) is presented. The estimation method utilizes apparent magnitude, azimuth angle, and elevation angle to estimate the position and velocity of a typical LDV, such as a high altitude balloon (HAB). In order to validate the accuracy of the estimated parameters gained from an unscented Kalman filter, two sets of experiments are carried out to obtain the nonresolved photometric and astrometric data. In the experiments, a HAB launch is planned; models of the HAB dynamics and kinematics and observation models are built to use as time update and measurement update functions, respectively. When the HAB is launched, a ground-based optoelectronic detector is used to capture the object images, which are processed using aperture photometry technology to obtain the time-varying apparent magnitude of the HAB. Two sets of actual and estimated parameters are given to clearly indicate the parameter differences. Two sets of errors between the actual and estimated parameters are also given to show how the estimated position and velocity differ with respect to the observation time. The similar distribution curve results from the two scenarios, which agree within 3σ, verify that nonresolved photometric and astrometric data can be used to estimate the indirectly observable state parameters (position and velocity) for a typical LDV. This technique can be applied to small and dim space objects in the future.
Probabilistic Analysis of Pattern Formation in Monotonic Self-Assembly
Moore, Tyler G.; Garzon, Max H.; Deaton, Russell J.
2015-01-01
Inspired by biological systems, self-assembly aims to construct complex structures. It functions through piece-wise, local interactions among component parts and has the potential to produce novel materials and devices at the nanoscale. Algorithmic self-assembly models the product of self-assembly as the output of some computational process, and attempts to control the process of assembly algorithmically. Though providing fundamental insights, these computational models have yet to fully account for the randomness that is inherent in experimental realizations, which tend to be based on trial and error methods. In order to develop a method of analysis that addresses experimental parameters, such as error and yield, this work focuses on the capability of assembly systems to produce a pre-determined set of target patterns, either accurately or perhaps only approximately. Self-assembly systems that assemble patterns that are similar to the targets in a significant percentage are “strong” assemblers. In addition, assemblers should predominantly produce target patterns, with a small percentage of errors or junk. These definitions approximate notions of yield and purity in chemistry and manufacturing. By combining these definitions, a criterion for efficient assembly is developed that can be used to compare the ability of different assembly systems to produce a given target set. Efficiency is a composite measure of the accuracy and purity of an assembler. Typical examples in algorithmic assembly are assessed in the context of these metrics. In addition to validating the method, they also provide some insight that might be used to guide experimentation. Finally, some general results are established that, for efficient assembly, imply that every target pattern is guaranteed to be assembled with a minimum common positive probability, regardless of its size, and that a trichotomy exists to characterize the global behavior of typical efficient, monotonic self-assembly systems in the literature. PMID:26421616
A New Strategy in Observer Modeling for Greenhouse Cucumber Seedling Growth
Qiu, Quan; Zheng, Chenfei; Wang, Wenping; Qiao, Xiaojun; Bai, He; Yu, Jingquan; Shi, Kai
2017-01-01
State observer is an essential component in computerized control loops for greenhouse-crop systems. However, the current accomplishments of observer modeling for greenhouse-crop systems mainly focus on mass/energy balance, ignoring physiological responses of crops. As a result, state observers for crop physiological responses are rarely developed, and control operations are typically made based on experience rather than actual crop requirements. In addition, existing observer models require a large number of parameters, leading to heavy computational load and poor application feasibility. To address these problems, we present a new state observer modeling strategy that takes both environmental information and crop physiological responses into consideration during the observer modeling process. Using greenhouse cucumber seedlings as an instance, we sample 10 physiological parameters of cucumber seedlings at different time point during the exponential growth stage, and employ them to build growth state observers together with 8 environmental parameters. Support vector machine (SVM) acts as the mathematical tool for observer modeling. Canonical correlation analysis (CCA) is used to select the dominant environmental and physiological parameters in the modeling process. With the dominant parameters, simplified observer models are built and tested. We conduct contrast experiments with different input parameter combinations on simplified and un-simplified observers. Experimental results indicate that physiological information can improve the prediction accuracies of the growth state observers. Furthermore, the simplified observer models can give equivalent or even better performance than the un-simplified ones, which verifies the feasibility of CCA. The current study can enable state observers to reflect crop requirements and make them feasible for applications with simplified shapes, which is significant for developing intelligent greenhouse control systems for modern greenhouse production. PMID:28848565
A New Strategy in Observer Modeling for Greenhouse Cucumber Seedling Growth.
Qiu, Quan; Zheng, Chenfei; Wang, Wenping; Qiao, Xiaojun; Bai, He; Yu, Jingquan; Shi, Kai
2017-01-01
State observer is an essential component in computerized control loops for greenhouse-crop systems. However, the current accomplishments of observer modeling for greenhouse-crop systems mainly focus on mass/energy balance, ignoring physiological responses of crops. As a result, state observers for crop physiological responses are rarely developed, and control operations are typically made based on experience rather than actual crop requirements. In addition, existing observer models require a large number of parameters, leading to heavy computational load and poor application feasibility. To address these problems, we present a new state observer modeling strategy that takes both environmental information and crop physiological responses into consideration during the observer modeling process. Using greenhouse cucumber seedlings as an instance, we sample 10 physiological parameters of cucumber seedlings at different time point during the exponential growth stage, and employ them to build growth state observers together with 8 environmental parameters. Support vector machine (SVM) acts as the mathematical tool for observer modeling. Canonical correlation analysis (CCA) is used to select the dominant environmental and physiological parameters in the modeling process. With the dominant parameters, simplified observer models are built and tested. We conduct contrast experiments with different input parameter combinations on simplified and un-simplified observers. Experimental results indicate that physiological information can improve the prediction accuracies of the growth state observers. Furthermore, the simplified observer models can give equivalent or even better performance than the un-simplified ones, which verifies the feasibility of CCA. The current study can enable state observers to reflect crop requirements and make them feasible for applications with simplified shapes, which is significant for developing intelligent greenhouse control systems for modern greenhouse production.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Zhou, X., E-mail: zhouxuan12@mails.thu.edu.cn; Zeng, R.; Zhuang, C.
2015-06-15
Leader discharge is one of the main phases in long air gap breakdown, which is characterized by high temperature and high conductivity. It is of great importance to determine thermal characteristics of leader discharges. In this paper, a long-optical-path Mach-Zehnder interferometer was set up to measure the thermal parameters (thermal diameter, gas density, and gas temperature) of positive leader discharges in atmospheric air. IEC standard positive switching impulse voltages were applied to a near-one-meter point-plane air gap. Filamentary channels with high gas temperature and low density corresponding to leader discharges were observed as significant distortions in the interference fringe images.more » Typical diameters of the entire heated channel range from 1.5 mm to 3.5 mm with an average expansion velocity of 6.7 m/s. In contrast, typical diameters of the intensely heated region with a sharp gas density reduction range from 0.4 mm to 1.1 mm, about one third of the entire heated channel. The radial distribution of the gas density is calculated from the fringe displacements by performing an Abel inverse transform. The typical calculated gas density reduction in the center of a propagating leader channel is 80% to 90%, corresponding to a gas temperature of 1500 K to 3000 K based on the ideal gas law. Leaders tend to terminate if the central temperature is below 1500 K.« less
Ecophysiological parameters for Pacific Northwest trees.
Amy E. Hessl; Cristina Milesi; Michael A. White; David L. Peterson; Robert E. Keane
2004-01-01
We developed a species- and location-specific database of published ecophysiological variables typically used as input parameters for biogeochemical models of coniferous and deciduous forested ecosystems in the Western United States. Parameters are based on the requirements of Biome-BGC, a widely used biogeochemical model that was originally parameterized for the...
Crack curving in a ductile pressurized fuselage
NASA Astrophysics Data System (ADS)
Lam, Paul W.
Moire interferometry was used to study crack tip displacement fields of a biaxially loaded cruciform type 0.8mm thick 2024-T3 aluminum specimen with various tearstrap reinforcement configurations: Unreinforced, Bonded, Bonded+Riveted, and Machined Pad-up. A program was developed using the commercially available code Matlab to derive strain, stress, and integral parameters from the experimental displacements. An FEM model of the crack tip area, with experimental displacements as boundary conditions, was used to validate FEM calculations of crack tip parameters. The results indicate that T*-integral parameter reaches a value of approximately 120 MPa-m0.5 during stable crack propagation which agrees with previously published values for straight cracks in the same material. The approximate computation method employed in this study uses a partial contour around the crack tip that neglects the contribution from the portion behind the crack tip where there is significant unloading. Strain distributions around the crack tip were obtained from experimental displacements and indicate that Maximum Principal Strain or Equivalent Strain can predict the direction of crack propagation, and is generally comparable with predictions using the Erdogan-Sih and Kosai-Ramulu-Kobayashi criteria. The biaxial tests to failure showed that the Machined Pad-up specimen carried the highest load, with the Bonded specimen next, at 78% of the Machined Pad-up value. The Bonded+Riveted specimen carried a lower load than the Bonded, at 67% of the Machined Pad-up value, which was the same as that carried by the Unreinforced specimen. The tearstraps of the bonded specimens remained intact after the specimen failed while the integrally machined reinforcement broke with the specimen. FEM studies were also made of skin flapping in typical Narrow and Wide-body fuselage sections, both containing the same crack path from a full-scale fatigue test of a Narrow-body fuselage. Results indicate that the magnitude of CTOA and CTOD depends on the structural geometry, and including plasticity increases the crack tip displacements. An estimate of the strain in the skin flaps at the crack tip may indicate the tendency for flapping. Out-of-plane effects become significant as the crack propagates and curves.
Systematic parameter estimation in data-rich environments for cell signalling dynamics
Nim, Tri Hieu; Luo, Le; Clément, Marie-Véronique; White, Jacob K.; Tucker-Kellogg, Lisa
2013-01-01
Motivation: Computational models of biological signalling networks, based on ordinary differential equations (ODEs), have generated many insights into cellular dynamics, but the model-building process typically requires estimating rate parameters based on experimentally observed concentrations. New proteomic methods can measure concentrations for all molecular species in a pathway; this creates a new opportunity to decompose the optimization of rate parameters. Results: In contrast with conventional parameter estimation methods that minimize the disagreement between simulated and observed concentrations, the SPEDRE method fits spline curves through observed concentration points, estimates derivatives and then matches the derivatives to the production and consumption of each species. This reformulation of the problem permits an extreme decomposition of the high-dimensional optimization into a product of low-dimensional factors, each factor enforcing the equality of one ODE at one time slice. Coarsely discretized solutions to the factors can be computed systematically. Then the discrete solutions are combined using loopy belief propagation, and refined using local optimization. SPEDRE has unique asymptotic behaviour with runtime polynomial in the number of molecules and timepoints, but exponential in the degree of the biochemical network. SPEDRE performance is comparatively evaluated on a novel model of Akt activation dynamics including redox-mediated inactivation of PTEN (phosphatase and tensin homologue). Availability and implementation: Web service, software and supplementary information are available at www.LtkLab.org/SPEDRE Supplementary information: Supplementary data are available at Bioinformatics online. Contact: LisaTK@nus.edu.sg PMID:23426255
Dynamic Stability Analysis of Blunt Body Entry Vehicles Using Time-Lagged Aftbody Pitching Moments
NASA Technical Reports Server (NTRS)
Kazemba, Cole D.; Braun, Robert D.; Schoenenberger, Mark; Clark, Ian G.
2013-01-01
This analysis defines an analytic model for the pitching motion of blunt bodies during atmospheric entry. The proposed model is independent of the pitch damping sum coefficient present in the standard formulation of the equations of motion describing pitch oscillations of a decelerating blunt body, instead using the principle of a time-lagged aftbody moment as the forcing function for oscillation divergence. Four parameters, all with intuitive physical relevance, are introduced to fully define the aftbody moment and the associated time delay. It is shown that the dynamic oscillation responses typical to blunt bodies can be produced using hysteresis of the aftbody moment in place of the pitch damping coefficient. The approach used in this investigation is shown to be useful in understanding the governing physical mechanisms for blunt body dynamic stability and in guiding vehicle and mission design requirements. A validation case study using simulated ballistic range test data is conducted. From this, parameter identification is carried out through the use of a least squares optimizing routine. Results show good agreement with the limited existing literature for the parameters identified, suggesting that the model proposed could be validated by an experimental ballistic range test series. The trajectories produced by the identified parameters were found to match closely those from the MER ballistic range tests for a wide array of initial conditions and can be identified with a reasonable number of ballistic range shots and computational effort.
A Bayesian approach for parameter estimation and prediction using a computationally intensive model
Higdon, Dave; McDonnell, Jordan D.; Schunck, Nicolas; ...
2015-02-05
Bayesian methods have been successful in quantifying uncertainty in physics-based problems in parameter estimation and prediction. In these cases, physical measurements y are modeled as the best fit of a physics-based modelmore » $$\\eta (\\theta )$$, where θ denotes the uncertain, best input setting. Hence the statistical model is of the form $$y=\\eta (\\theta )+\\epsilon ,$$ where $$\\epsilon $$ accounts for measurement, and possibly other, error sources. When nonlinearity is present in $$\\eta (\\cdot )$$, the resulting posterior distribution for the unknown parameters in the Bayesian formulation is typically complex and nonstandard, requiring computationally demanding computational approaches such as Markov chain Monte Carlo (MCMC) to produce multivariate draws from the posterior. Although generally applicable, MCMC requires thousands (or even millions) of evaluations of the physics model $$\\eta (\\cdot )$$. This requirement is problematic if the model takes hours or days to evaluate. To overcome this computational bottleneck, we present an approach adapted from Bayesian model calibration. This approach combines output from an ensemble of computational model runs with physical measurements, within a statistical formulation, to carry out inference. A key component of this approach is a statistical response surface, or emulator, estimated from the ensemble of model runs. We demonstrate this approach with a case study in estimating parameters for a density functional theory model, using experimental mass/binding energy measurements from a collection of atomic nuclei. Lastly, we also demonstrate how this approach produces uncertainties in predictions for recent mass measurements obtained at Argonne National Laboratory.« less
Manipulating perceptual parameters in a continuous performance task.
Shalev, Nir; Humphreys, Glyn; Demeyere, Nele
2018-02-01
Sustained attention (SA) is among the most studied faculties of human cognition, and thought to be crucial for many aspects of behavior. Measuring SA often relies on performance on a continuous, low-demanding task. Such continuous performance tasks (CPTs) have many variations, and sustained attention is typically estimated based on variability in reaction times. While relying on reaction times may be useful in some cases, it can pose a challenge when working with clinical populations. To increase interpersonal variability in task parameters that do not rely on speed, researchers have increased demands for memory and response inhibition. These approaches, however, may be confounded when used to assess populations that suffer from multiple cognitive deficits. In the current study, we propose a new approach for increasing task variability by increasing the attentional demands. In order to do so, we created a new variation of a CPT - a masked version, where inattention is more likely to cause misidentifying a target. After establishing that masking indeed decreases target detection, we further investigated which task parameter may influence response biases. To do so, we contrasted two versions of the CPT with different target/distractor ratio. We then established how perceptual parameters can be controlled independently in a CPT. Following the experimental manipulations, we tested the MCCPT with aging controls and chronic stroke patients to assure the task can be used with target populations. The results confirm the MCCPT as a task providing high sensitivity without relying on reaction speed, and feasible for patients.
VESGEN Software for Mapping and Quantification of Vascular Regulators
NASA Technical Reports Server (NTRS)
Parsons-Wingerter, Patricia A.; Vickerman, Mary B.; Keith, Patricia A.
2012-01-01
VESsel GENeration (VESGEN) Analysis is an automated software that maps and quantifies effects of vascular regulators on vascular morphology by analyzing important vessel parameters. Quantification parameters include vessel diameter, length, branch points, density, and fractal dimension. For vascular trees, measurements are reported as dependent functions of vessel branching generation. VESGEN maps and quantifies vascular morphological events according to fractal-based vascular branching generation. It also relies on careful imaging of branching and networked vascular form. It was developed as a plug-in for ImageJ (National Institutes of Health, USA). VESGEN uses image-processing concepts of 8-neighbor pixel connectivity, skeleton, and distance map to analyze 2D, black-and-white (binary) images of vascular trees, networks, and tree-network composites. VESGEN maps typically 5 to 12 (or more) generations of vascular branching, starting from a single parent vessel. These generations are tracked and measured for critical vascular parameters that include vessel diameter, length, density and number, and tortuosity per branching generation. The effects of vascular therapeutics and regulators on vascular morphology and branching tested in human clinical or laboratory animal experimental studies are quantified by comparing vascular parameters with control groups. VESGEN provides a user interface to both guide and allow control over the users vascular analysis process. An option is provided to select a morphological tissue type of vascular trees, network or tree-network composites, which determines the general collections of algorithms, intermediate images, and output images and measurements that will be produced.
Dynamics of a neuron model in different two-dimensional parameter-spaces
NASA Astrophysics Data System (ADS)
Rech, Paulo C.
2011-03-01
We report some two-dimensional parameter-space diagrams numerically obtained for the multi-parameter Hindmarsh-Rose neuron model. Several different parameter planes are considered, and we show that regardless of the combination of parameters, a typical scenario is preserved: for all choice of two parameters, the parameter-space presents a comb-shaped chaotic region immersed in a large periodic region. We also show that exist regions close these chaotic region, separated by the comb teeth, organized themselves in period-adding bifurcation cascades.
76 FR 32073 - Investing in Innovation Fund
Federal Register 2010, 2011, 2012, 2013, 2014
2011-06-03
... that the current evidence requirements established in the 2010 i3 NFP focus too heavily on experimental and quasi-experimental studies that are typically possible only for more mature organizations and...
Probing the underlying physics of ejecta production from shocked Sn samples
NASA Astrophysics Data System (ADS)
Zellner, M. B.; McNeil, W. Vogan; Hammerberg, J. E.; Hixson, R. S.; Obst, A. W.; Olson, R. T.; Payton, J. R.; Rigg, P. A.; Routley, N.; Stevens, G. D.; Turley, W. D.; Veeser, L.; Buttler, W. T.
2008-06-01
This effort investigates the underlying physics of ejecta production for high explosive (HE) shocked Sn surfaces prepared with finishes typical to those roughened by tool marks left from machining processes. To investigate the physical mechanisms of ejecta production, we compiled and re-examined ejecta data from two experimental campaigns [W. S. Vogan et al., J. Appl. Phys. 98, 113508 (1998); M. B. Zellner et al., ibid. 102, 013522 (2007)] to form a self-consistent data set spanning a large parameter space. In the first campaign, ejecta created upon shock release at the back side of HE shocked Sn samples were characterized for samples with varying surface finishes but at similar shock-breakout pressures PSB. In the second campaign, ejecta were characterized for HE shocked Sn samples with a constant surface finish but at varying PSB.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Sharma, V.K.; Patel, A.S.; Sharma, A.
This paper presents the design of magnetic coil for relativistic magnetron (RM) for LIA (Linear Induction Accelerator)-400 systems. Vacuum improves the efficiency of RM for HPM generation. Magnetic field in RM is very critical parameter and should be nearly constant in the active region. Typical coils are helical in nature, which have multi turns of varying radius. Magnetic field calculation of such coils with basic equations of Helmholtz coils or solenoid with mean radius can only give estimation. Field computational softwares like CST require small mesh size and boundary at very far so consume large memory and take very muchmore » time. Helical coils are simplified such that the basic law of magnetic field calculation i.e. Bio-Savart law can be applied with less complexity. Pairs of spiral coils have been analyzed for magnetic field and Lorenz's force. The approach is field experimentally validated. (author)« less
Photogrammetry Applied to Wind Tunnel Testing
NASA Technical Reports Server (NTRS)
Liu, Tian-Shu; Cattafesta, L. N., III; Radeztsky, R. H.; Burner, A. W.
2000-01-01
In image-based measurements, quantitative image data must be mapped to three-dimensional object space. Analytical photogrammetric methods, which may be used to accomplish this task, are discussed from the viewpoint of experimental fluid dynamicists. The Direct Linear Transformation (DLT) for camera calibration, used in pressure sensitive paint, is summarized. An optimization method for camera calibration is developed that can be used to determine the camera calibration parameters, including those describing lens distortion, from a single image. Combined with the DLT method, this method allows a rapid and comprehensive in-situ camera calibration and therefore is particularly useful for quantitative flow visualization and other measurements such as model attitude and deformation in production wind tunnels. The paper also includes a brief description of typical photogrammetric applications to temperature- and pressure-sensitive paint measurements and model deformation measurements in wind tunnels.
An Energy-Based Hysteresis Model for Magnetostrictive Transducers
NASA Technical Reports Server (NTRS)
Calkins, F. T.; Smith, R. C.; Flatau, A. B.
1997-01-01
This paper addresses the modeling of hysteresis in magnetostrictive transducers. This is considered in the context of control applications which require an accurate characterization of the relation between input currents and strains output by the transducer. This relation typically exhibits significant nonlinearities and hysteresis due to inherent properties of magnetostrictive materials. The characterization considered here is based upon the Jiles-Atherton mean field model for ferromagnetic hysteresis in combination with a quadratic moment rotation model for magnetostriction. As demonstrated through comparison with experimental data, the magnetization model very adequately quantifies both major and minor loops under various operating conditions. The combined model can then be used to accurately characterize output strains at moderate drive levels. The advantages to this model lie in the small number (six) of required parameters and the flexibility it exhibits in a variety of operating conditions.
Sivamani, Seralathan; T, Micha Premkumar; Sohail, Mohammed; T, Mohan; V, Hariram
2017-12-01
Performance and load testing data of a three bladed two stage LENZ type vertical axis wind turbine from the experiments conducted in an open environment condition at Hindustan Institute of Technology and Science, Chennai (location 23.2167°N, 72.6833°E) are presented here. Low-wind velocity ranging from 2 to 11 m/s is available everywhere irrespective of climatic seasons and this data provides the support to the researchers using numerical tool to validate and develop an enhanced Lenz type design. Raw data obtained during the measurements are processed and presented in the form so as to compare with other typical outputs. The data is measured at different wind speeds prevalent in the open field condition ranging from 3 m/s to 9 m/s.
Tutorial on Fourier space coverage for scattering experiments, with application to SAR
NASA Astrophysics Data System (ADS)
Deming, Ross W.
2010-04-01
The Fourier Diffraction Theorem relates the data measured during electromagnetic, optical, or acoustic scattering experiments to the spatial Fourier transform of the object under test. The theorem is well-known, but since it is based on integral equations and complicated mathematical expansions, the typical derivation may be difficult for the non-specialist. In this paper, the theorem is derived and presented using simple geometry, plus undergraduatelevel physics and mathematics. For practitioners of synthetic aperture radar (SAR) imaging, the theorem is important to understand because it leads to a simple geometric and graphical understanding of image resolution and sampling requirements, and how they are affected by radar system parameters and experimental geometry. Also, the theorem can be used as a starting point for imaging algorithms and motion compensation methods. Several examples are given in this paper for realistic scenarios.
Xu, Xiaolun; Li, Yongqian; Wang, Binbin; Zhou, Zili
2015-10-01
The resonance characteristics of plasmonic metamaterials absorbers (PMAs) are strongly dependent on geometric parameters. A resistor-inductor-capacitor (RLC) circuit model has been extended to predict the resonance wavelengths and the bandwidths of multiple magnetic polaritons modes in PMAs. For a typical metallic-dielectric-metallic structure absorber working in the infrared region, the developed model describes the correlation between the resonance characteristics and the dimensional sizes. In particular, the RLC model is suitable for not only the fundamental resonance mode, but also for the second- and third-order resonance modes. The prediction of the resonance characteristics agrees fairly well with those calculated by the finite-difference time-domain simulation and the experimental results. The developed RLC model enables the facilitation of designing multi-band PMAs for infrared radiation detectors and thermal emitters.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Nekkab, M., E-mail: mohammed-nekkab@yahoo.com; LESIMS laboratory, Physics Department, Faculty of Sciences, University of Setif 1, 19000 Setif; Kahoul, A.
The analytical methods based on X-ray fluorescence are advantageous for practical applications in a variety of fields including atomic physics, X-ray fluorescence surface chemical analysis and medical research and so the accurate fluorescence yields (ω{sub K}) are required for these applications. In this contribution we report a new parameters for calculation of K-shell fluorescence yields (ω{sub K}) of elements in the range of 11≤Z≤30. The experimental data are interpolated by using the famous analytical function (ω{sub k}/(1−ω{sub k})){sup 1/q} (were q=3, 3.5 and 4) vs Z to deduce the empirical K-shell fluorescence yields. A comparison is made between the resultsmore » of the procedures followed here and those theoretical and other semi-empirical fluorescence yield values. Reasonable agreement was typically obtained between our result and other works.« less
On the use of video projectors for three-dimensional scanning
NASA Astrophysics Data System (ADS)
Juarez-Salazar, Rigoberto; Diaz-Ramirez, Victor H.; Robledo-Sanchez, Carlos; Diaz-Gonzalez, Gerardo
2017-08-01
Structured light projection is one of the most useful methods for accurate three-dimensional scanning. Video projectors are typically used as the illumination source. However, because video projectors are not designed for structured light systems, some considerations such as gamma calibration must be taken into account. In this work, we present a simple method for gamma calibration of video projectors. First, the experimental fringe patterns are normalized. Then, the samples of the fringe patterns are sorted in ascending order. The sample sorting leads to a simple three-parameter sine curve that is fitted using the Gauss-Newton algorithm. The novelty of this method is that the sorting process removes the effect of the unknown phase. Thus, the resulting gamma calibration algorithm is significantly simplified. The feasibility of the proposed method is illustrated in a three-dimensional scanning experiment.
Quantum state engineering using one-dimensional discrete-time quantum walks
NASA Astrophysics Data System (ADS)
Innocenti, Luca; Majury, Helena; Giordani, Taira; Spagnolo, Nicolò; Sciarrino, Fabio; Paternostro, Mauro; Ferraro, Alessandro
2017-12-01
Quantum state preparation in high-dimensional systems is an essential requirement for many quantum-technology applications. The engineering of an arbitrary quantum state is, however, typically strongly dependent on the experimental platform chosen for implementation, and a general framework is still missing. Here we show that coined quantum walks on a line, which represent a framework general enough to encompass a variety of different platforms, can be used for quantum state engineering of arbitrary superpositions of the walker's sites. We achieve this goal by identifying a set of conditions that fully characterize the reachable states in the space comprising walker and coin and providing a method to efficiently compute the corresponding set of coin parameters. We assess the feasibility of our proposal by identifying a linear optics experiment based on photonic orbital angular momentum technology.
An experimental investigation of the interior noise control effects of propeller synchrophasing
NASA Technical Reports Server (NTRS)
Jones, J. D.; Fuller, C. R.
1986-01-01
A simplified cylindrical model of an aircraft fuselage is used to investigate the mechanisms of interior noise suppression using synchrophasing techniques. This investigation allows isolation of important parameters to define the characteristics of synchrophasing. The optimum synchrophase angle for maximum noise reduction is found for several interior microphone positions with pure tone source excitation. Noise reductions of up to 30 dB are shown for some microphone positions, however, overall reductions are less. A computer algorithm is developed to decompose the cylinder vibration into modal components over a wide range of synchrophase angles. The circumferential modal response of the shell vibration is shown to govern the transmission of sound into the cylinder rather than localized transmission. As well as investigating synchrophasing, the interior sound field due to sources typical of propellers has been measured and discussed.
NASA Astrophysics Data System (ADS)
Neubecker, R.; Oppo, G.-L.; Thuering, B.; Tschudi, T.
1995-07-01
The use of liquid-crystal light valves (LCLV's) as nonlinear elements in diffractive optical systems with feedback leads to the formation of a variety of optical patterns. The spectrum of possible spatial instabilities is shown to be even richer when the LCLV's capability for polarization modulation is utilized and internal threshold and saturation effects are considered. We derive a model for the feedback system based on a realistic description of the LCLV's internal function and coupling to a polarizer. Thresholds of pattern formation are compared to the common Kerr-type approximation and show transitions involving rolls, squares, hexagons, and tiled patterns. Numerical and experimental results confirm our theoretical predictions and unveil how patterns and their typical length scales can be easily controlled by changes of the parameters.
Controllable high-fidelity quantum state transfer and entanglement generation in circuit QED
Xu, Peng; Yang, Xu-Chen; Mei, Feng; Xue, Zheng-Yuan
2016-01-01
We propose a scheme to realize controllable quantum state transfer and entanglement generation among transmon qubits in the typical circuit QED setup based on adiabatic passage. Through designing the time-dependent driven pulses applied on the transmon qubits, we find that fast quantum sate transfer can be achieved between arbitrary two qubits and quantum entanglement among the qubits also can also be engineered. Furthermore, we numerically analyzed the influence of the decoherence on our scheme with the current experimental accessible systematical parameters. The result shows that our scheme is very robust against both the cavity decay and qubit relaxation, the fidelities of the state transfer and entanglement preparation process could be very high. In addition, our scheme is also shown to be insensitive to the inhomogeneous of qubit-resonator coupling strengths. PMID:26804326
How surface functional groups influence fracturation in nanofluids droplets dry-outs
NASA Astrophysics Data System (ADS)
Brutin, David; Carle, Florian
2012-11-01
We report an experimental investigation of the drying of a deposited droplets of nanofluids with different surface functional groups. For identical nano-particles diameter, material and concentration, identical drying conditions, the substrate and the functional groups at the nano-particles surface are changed. Both flow motion, adhesion, gelation and fracturation occur during the evaporation of this complex matter leading to different final typical patterns. The differences in between the patterns are explained based on the surface chemical potential. Crack shapes and wavelengths are globally proportional to the electrical charges carried at the nano- particles surface which is a new parameter to implement in existing predicting models. Presently only the colloid concentration and softness and the deposit thickness are used (Allain and Limat, 1995). The authors gratefully acknowledge the help and the fruitful discussions raised with J.B. Lang.
Photon merging and splitting in electromagnetic field inhomogeneities
NASA Astrophysics Data System (ADS)
Gies, Holger; Karbstein, Felix; Seegert, Nico
2016-04-01
We investigate photon merging and splitting processes in inhomogeneous, slowly varying electromagnetic fields. Our study is based on the three-photon polarization tensor following from the Heisenberg-Euler effective action. We put special emphasis on deviations from the well-known constant field results, also revisiting the selection rules for these processes. In the context of high-intensity laser facilities, we analytically determine compact expressions for the number of merged/split photons as obtained in the focal spots of intense laser beams. For the parameter range of typical petawatt class laser systems as pump and probe, we provide estimates for the numbers of signal photons attainable in an actual experiment. The combination of frequency upshifting, polarization dependence and scattering off the inhomogeneities renders photon merging an ideal signature for the experimental exploration of nonlinear quantum vacuum properties.
Calculation of K-shell fluorescence yields for low-Z elements
NASA Astrophysics Data System (ADS)
Nekkab, M.; Kahoul, A.; Deghfel, B.; Aylikci, N. Küp; Aylikçi, V.
2015-03-01
The analytical methods based on X-ray fluorescence are advantageous for practical applications in a variety of fields including atomic physics, X-ray fluorescence surface chemical analysis and medical research and so the accurate fluorescence yields (ωK) are required for these applications. In this contribution we report a new parameters for calculation of K-shell fluorescence yields (ωK) of elements in the range of 11≤Z≤30. The experimental data are interpolated by using the famous analytical function (ωk/(1 -ωk)) 1 /q (were q=3, 3.5 and 4) vs Z to deduce the empirical K-shell fluorescence yields. A comparison is made between the results of the procedures followed here and those theoretical and other semi-empirical fluorescence yield values. Reasonable agreement was typically obtained between our result and other works.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Prost, Lionel; Carneiro, Jean-Paul; Shemyakin, Alexander
In a Low Energy Beam Transport line (LEBT), the emittance growth due to the beam's own space charge is typically suppressed by way of neutralization from either electrons or ions, which originate from ionization of the background gas. In cases where the beam is chopped, the neutralization pattern changes throughout the beginning of the pulse, causing the Twiss parameters to differ significantly from their steady state values, which, in turn, may result in beam losses downstream. For a modest beam perveance, there is an alternative solution, in which the beam is kept un-neutralized in the portion of the LEBT thatmore » contains the chopper. The emittance can be nearly preserved if the transition to the un-neutralized section occurs where the beam exhibits low transverse tails. This report discusses the experimental realization of such a scheme at Fermilab's PXIE, where low beam emittance dilution was demonstrated« less
NASA Astrophysics Data System (ADS)
Danilin, A. I.; Chernyavsky, A. Zh.; Danilin, S. A.; Neverov, V. V.; Voroh, D. A.; Blagin, E. V.
2018-03-01
New methods and means for monitoring working condition of the rotating elements of steam compressor unit such as blade ring of the impeller and gears of multiplier are considered. Blade control is carried out by the signalling device of pre-emergency deformation of impeller blades. Control of the gears condition is carried out by apparatus system which allows to analyse change of the signal form caused by the gears wear. Influence of the wear types on the typical information parameters of the analysed signals is described. Technical characteristics of the devices and experimental research results are presented. Described control systems allow to detect deviations equal to 1-2% from initial condition. Application of such systems gives the opportunity to improve fault diagnosis and maintenance in 2-3 times.
Melo, Roberta Michelon; Mota, Helena Bolli; Berti, Larissa Cristina
2017-06-08
This study used acoustic and articulatory analyses to characterize the contrast between alveolar and velar stops with typical speech data, comparing the parameters (acoustic and articulatory) of adults and children with typical speech development. The sample consisted of 20 adults and 15 children with typical speech development. The analyzed corpus was organized through five repetitions of each target-word (/'kap ə/, /'tapə/, /'galo/ e /'daɾə/). These words were inserted into a carrier phrase and the participant was asked to name them spontaneously. Simultaneous audio and video data were recorded (tongue ultrasound images). The data was submitted to acoustic analyses (voice onset time; spectral peak and burst spectral moments; vowel/consonant transition and relative duration measures) and articulatory analyses (proportion of significant axes of the anterior and posterior tongue regions and description of tongue curves). Acoustic and articulatory parameters were effective to indicate the contrast between alveolar and velar stops, mainly in the adult group. Both speech analyses showed statistically significant differences between the two groups. The acoustic and articulatory parameters provided signals to characterize the phonic contrast of speech. One of the main findings in the comparison between adult and child speech was evidence of articulatory refinement/maturation even after the period of segment acquisition.
NASA Astrophysics Data System (ADS)
Spector, A. A.; Yuan, D.; Somers, S.; Grayson, W. L.
2018-04-01
Stem cells play a key role in the healthy development and maintenance of organisms. They are also critically important in medical treatments of various diseases. It has been recently demonstrated that the mechanical factors such as forces, adhesion, stiffness, relaxation, etc. have significant effects on stem cell functions. Under physiological conditions, cells (stem cells) in muscles, heart, and blood vessels are under the action of externally applied strains. We consider the stem cell microenvironment and performance associated with their conversion (differentiation) into skeletal muscle cells. Two problems are studied by using mathematical models whose parameters are then optimized by fitting experiments. First, we present our analysis of the process of stem cell differentiation under the application of cyclic unidirectional strain. This process is interpreted as a transition through several (six) stages where each of them is defined in terms of expression of a set of factors typical to skeletal muscle cells. The stem cell evolution toward muscle cells is described by a system of nonlinear ODEs. The parameters of the model are determined by fitting the experimental data on the time course of expression of the factors under consideration. Second, we analyse the mechanical (relaxation) properties of a scaffold that serves as the microenvironment for stem cells differentiation into skeletal muscle cells. This scaffold (surrounded by a liquid solution) is composed of unidirectional fibers with pores between them. The relaxation properties of the scaffold are studied in an experiment where a long cylindrical specimen is loaded by the application of ramp displacement until the strain reaches a prescribed value. The magnitude of the corresponding load is recorded. The specimen is considered as transversely isotropic poroelastic cylinder whose force relaxation is associated with liquid diffusion through the pores. An analytical solution for the total force applied to the cylinder in terms of the mechanical properties of the scaffold (longitudinal and lateral Young’s moduli, two Poisson’s ratios, and typical time of liquid diffusion) is used. The number of constant is then reduced to three by estimating the longitudinal Young’s modulus and one of Poisson’s ratios from an earlier experiment. Finally, three remaining parameters are estimated by fitting the relaxation curve corresponding to strain rate of loading of 0.01 s‑1. The developed mathematical solution is then tested by comparing the theoretical and experimental results for another strain rate of 0.0025 s‑1. The scaffold relaxation properties can be important for differentiation of stem cells inside the pores.
Sims, Lee B; Frieboes, Hermann B; Steinbach-Rankins, Jill M
2018-01-01
A variety of drug-delivery platforms have been employed to deliver therapeutic agents across cervicovaginal mucus (CVM) and the vaginal mucosa, offering the capability to increase the longevity and retention of active agents to treat infections of the female reproductive tract (FRT). Nanoparticles (NPs) have been shown to improve retention, diffusion, and cell-specific targeting via specific surface modifications, relative to other delivery platforms. In particular, polymeric NPs represent a promising option that has shown improved distribution through the CVM. These NPs are typically fabricated from nontoxic, non-inflammatory, US Food and Drug Administration-approved polymers that improve biocompatibility. This review summarizes recent experimental studies that have evaluated NP transport in the FRT, and highlights research areas that more thoroughly and efficiently inform polymeric NP design, including mathematical modeling. An overview of the in vitro, ex vivo, and in vivo NP studies conducted to date - whereby transport parameters are determined, extrapolated, and validated - is presented first. The impact of different NP design features on transport through the FRT is summarized, and gaps that exist due to the limitations of iterative experimentation alone are identified. The potential of mathematical modeling to complement the characterization and evaluation of diffusion and transport of delivery vehicles and active agents through the CVM and mucosa is discussed. Lastly, potential advancements combining experimental and mathematical knowledge are suggested to inform next-generation NP designs, such that infections in the FRT may be more effectively treated.
NASA Astrophysics Data System (ADS)
Danilin, A. I.; Chernyavskiy, A. Zh; Danilin, S. A.; Blagin, E. V.
2018-01-01
This article deals with non-contact exploitation control method based on the treatment of the radio wave signal reflected from controlled gear teeth and its advantages in comparison with traditional methods of gear teeth control. Justification of necessity to use such control method during multiplier gears condition determination during its exploitation is given. Also this article deals with influence of different types of gear wear on typical information parameters of analyzed signals. Disadvantages of the method which are the impossibility of determination of certain types of wear are also taken into account. Certain stages of the development of mathematical model for interaction of first converter with controlled surface. Suggested mathematical model uses only the laws of geometric optics without taking wave processes into account but considering first converter direction diagram influence during its interaction with controlled surface. Structural scheme of developed experimental system for gears teeth condition control for steam compressor. Operation of the experimental system of gear control is given on the base of structural scheme. Core of the developed device is microcontroller STM32 which treat the information received from the sensors as well as connection with computer. Certain elements of the experimental control system as well as its components are described separately. Photos of experimental unit for control for control method development in laboratory conditions are presented. Design of the first converter is given in short.
Decadal water quality variations at three typical basins of Mekong, Murray and Yukon
NASA Astrophysics Data System (ADS)
Khan, Afed U.; Jiang, Jiping; Wang, Peng
2018-02-01
Decadal distribution of water quality parameters is essential for surface water management. Decadal distribution analysis was conducted to assess decadal variations in water quality parameters at three typical watersheds of Murray, Mekong and Yukon. Right distribution shifts were observed for phosphorous and nitrogen parameters at the Mekong watershed monitoring sites while left shifts were noted at the Murray and Yukon monitoring sites. Nutrients pollution increases with time at the Mekong watershed while decreases at the Murray and Yukon watershed monitoring stations. The results implied that watershed located in densely populated developing area has higher risk of water quality deterioration in comparison to thinly populated developed area. The present study suggests best management practices at watershed scale to modulate water pollution.
Code of Federal Regulations, 2011 CFR
2011-07-01
... 40 Protection of Environment 12 2011-07-01 2009-07-01 true Can I conduct short-term experimental... I conduct short-term experimental production runs that cause parameters to deviate from operating limits? With the approval of the Administrator, you may conduct short-term experimental production runs...
Code of Federal Regulations, 2010 CFR
2010-07-01
... 40 Protection of Environment 12 2010-07-01 2010-07-01 true Can I conduct short-term experimental... I conduct short-term experimental production runs that cause parameters to deviate from operating limits? With the approval of the Administrator, you may conduct short-term experimental production runs...
Parametric study of the swimming performance of a fish robot propelled by a flexible caudal fin.
Low, K H; Chong, C W
2010-12-01
In this paper, we aim to study the swimming performance of fish robots by using a statistical approach. A fish robot employing a carangiform swimming mode had been used as an experimental platform for the performance study. The experiments conducted aim to investigate the effect of various design parameters on the thrust capability of the fish robot with a flexible caudal fin. The controllable parameters associated with the fin include frequency, amplitude of oscillation, aspect ratio and the rigidity of the caudal fin. The significance of these parameters was determined in the first set of experiments by using a statistical approach. A more detailed parametric experimental study was then conducted with only those significant parameters. As a result, the parametric study could be completed with a reduced number of experiments and time spent. With the obtained experimental result, we were able to understand the relationship between various parameters and a possible adjustment of parameters to obtain a higher thrust. The proposed statistical method for experimentation provides an objective and thorough analysis of the effects of individual or combinations of parameters on the swimming performance. Such an efficient experimental design helps to optimize the process and determine factors that influence variability.
Vinnakota, Kalyan C; Beard, Daniel A; Dash, Ranjan K
2009-01-01
Identification of a complex biochemical system model requires appropriate experimental data. Models constructed on the basis of data from the literature often contain parameters that are not identifiable with high sensitivity and therefore require additional experimental data to identify those parameters. Here we report the application of a local sensitivity analysis to design experiments that will improve the identifiability of previously unidentifiable model parameters in a model of mitochondrial oxidative phosphorylation and tricaboxylic acid cycle. Experiments were designed based on measurable biochemical reactants in a dilute suspension of purified cardiac mitochondria with experimentally feasible perturbations to this system. Experimental perturbations and variables yielding the most number of parameters above a 5% sensitivity level are presented and discussed.
NASA Astrophysics Data System (ADS)
Langenbach, K.; Heilig, M.; Horsch, M.; Hasse, H.
2018-03-01
A new method for predicting homogeneous bubble nucleation rates of pure compounds from vapor-liquid equilibrium (VLE) data is presented. It combines molecular dynamics simulation on the one side with density gradient theory using an equation of state (EOS) on the other. The new method is applied here to predict bubble nucleation rates in metastable liquid carbon dioxide (CO2). The molecular model of CO2 is taken from previous work of our group. PC-SAFT is used as an EOS. The consistency between the molecular model and the EOS is achieved by adjusting the PC-SAFT parameters to VLE data obtained from the molecular model. The influence parameter of density gradient theory is fitted to the surface tension of the molecular model. Massively parallel molecular dynamics simulations are performed close to the spinodal to compute bubble nucleation rates. From these simulations, the kinetic prefactor of the hybrid nucleation theory is estimated, whereas the nucleation barrier is calculated from density gradient theory. This enables the extrapolation of molecular simulation data to the whole metastable range including technically relevant densities. The results are tested against available experimental data and found to be in good agreement. The new method does not suffer from typical deficiencies of classical nucleation theory concerning the thermodynamic barrier at the spinodal and the bubble size dependence of surface tension, which is typically neglected in classical nucleation theory. In addition, the density in the center of critical bubbles and their surface tension is determined as a function of their radius. The usual linear Tolman correction to the capillarity approximation is found to be invalid.
Langenbach, K; Heilig, M; Horsch, M; Hasse, H
2018-03-28
A new method for predicting homogeneous bubble nucleation rates of pure compounds from vapor-liquid equilibrium (VLE) data is presented. It combines molecular dynamics simulation on the one side with density gradient theory using an equation of state (EOS) on the other. The new method is applied here to predict bubble nucleation rates in metastable liquid carbon dioxide (CO 2 ). The molecular model of CO 2 is taken from previous work of our group. PC-SAFT is used as an EOS. The consistency between the molecular model and the EOS is achieved by adjusting the PC-SAFT parameters to VLE data obtained from the molecular model. The influence parameter of density gradient theory is fitted to the surface tension of the molecular model. Massively parallel molecular dynamics simulations are performed close to the spinodal to compute bubble nucleation rates. From these simulations, the kinetic prefactor of the hybrid nucleation theory is estimated, whereas the nucleation barrier is calculated from density gradient theory. This enables the extrapolation of molecular simulation data to the whole metastable range including technically relevant densities. The results are tested against available experimental data and found to be in good agreement. The new method does not suffer from typical deficiencies of classical nucleation theory concerning the thermodynamic barrier at the spinodal and the bubble size dependence of surface tension, which is typically neglected in classical nucleation theory. In addition, the density in the center of critical bubbles and their surface tension is determined as a function of their radius. The usual linear Tolman correction to the capillarity approximation is found to be invalid.
Emmerink, Peggy M J; Van Den Eijnden, Regina J J M; Ter Bogt, Tom F M; Vanwesenbeeck, Ine
2017-01-01
Sexual assertiveness is an issue of interest in the context of gender equality and sexual health. This study investigated the social tuning hypothesis that encountering a gender-traditional partner would lead to stronger gender-typical behavior, i.e., respectively, higher and lower levels of taking sexual initiative among men and women. Participants ( N = 271) read a vignette describing a romantic partner, who was either presented as gender-traditional or not, followed by a sexual scenario. Subsequently, participants were asked about their expectations toward their own sexual initiative taking. Results showed a significant 'target gender-traditionality × participant gender × participant gender-typicality (masculinity/femininity)' interaction meaning that less gender-typical men were more likely to initiate sexual contact in the experimental, compared to the control condition. Men low in masculine characteristics showed higher initiative taking in response to a gender-traditional target female. We conclude that less gender-typical men seem to employ more social tuning toward their sexual partner, whereas more gender-typical men seem to adhere to their gender-typical behavior regardless of perceived partner characteristics. These results were not seen among the women in the sample. These findings are a starting point for the further development of experimental investigations regarding the gendered nature of both sexual initiative taking and sexual assertiveness in general.
Emmerink, Peggy M. J.; Van Den Eijnden, Regina J. J. M.; Ter Bogt, Tom F. M.; Vanwesenbeeck, Ine
2017-01-01
Sexual assertiveness is an issue of interest in the context of gender equality and sexual health. This study investigated the social tuning hypothesis that encountering a gender-traditional partner would lead to stronger gender-typical behavior, i.e., respectively, higher and lower levels of taking sexual initiative among men and women. Participants (N = 271) read a vignette describing a romantic partner, who was either presented as gender-traditional or not, followed by a sexual scenario. Subsequently, participants were asked about their expectations toward their own sexual initiative taking. Results showed a significant ‘target gender-traditionality × participant gender × participant gender-typicality (masculinity/femininity)’ interaction meaning that less gender-typical men were more likely to initiate sexual contact in the experimental, compared to the control condition. Men low in masculine characteristics showed higher initiative taking in response to a gender-traditional target female. We conclude that less gender-typical men seem to employ more social tuning toward their sexual partner, whereas more gender-typical men seem to adhere to their gender-typical behavior regardless of perceived partner characteristics. These results were not seen among the women in the sample. These findings are a starting point for the further development of experimental investigations regarding the gendered nature of both sexual initiative taking and sexual assertiveness in general. PMID:28203216
NASA Astrophysics Data System (ADS)
Liberini, Mariacira; Esposito, Sara; Reshad, Kambitz; Previtali, Barbara; Viola, Marco; Squillace, Antonino
2016-10-01
Every manufacturing process leaves on the surface of the piece a typical "technology signature". In particular, the laser welding leaves a feature at the edge of the weld bead called "undercut". In this work an experimental campaign has been conducted on Ti6Al4V butt joints. In particular a Central Composite Design (CCD) with the central point repeated three times has been investigated. In the CCD there are two factors (power and speed of the fiber laser) and five levels for each factor. This paper deals with the investigation about the correlation between the severity of the undercut and the process parameters of the laser welding. In particular, through the confocal microscopy, the original geometry of the joint was accurately acquired and rebuilt in order to make a FEM model and simulate the mechanical behavior using Ansys14.5. Moreover, response surfaces and level curves were carried out to understand and predict the depth and the width of the undercut starting from the power and the speed of the laser. At last a mathematic and geometry regression was performed in order to find a unique conical curve that interpolates all the different undercuts and that varies its parameters according to the process parameters. It is established that the process with higher speed minimizes and optimizes the undercut in the joints.
NASA Astrophysics Data System (ADS)
Bobkov, V. P.
2015-02-01
Some general matters concerned with description of burnout in channels are outlined. Data obtained from experimental investigations on critical heat fluxes (CHF) in different channels, CHF data banks, the main determining parameters, CHF basic dependences, and a system of correction functions are discussed. Two methods for estimating the CHF description errors are analyzed. The influence of operating parameters, transverse sizes of channels, and conditions at their inlet are analyzed. The effects of heat-transfer surface shape and heat supply arrangement are considered for concentric annular channels. The notions of a thermal boundary layer and an elementary thermal cell during burnout in channels with an intricate cross section are defined. New notions for describing CHF in rod assemblies are introduced: bundle effect, thermal misalignment, assembly-section-averaged and local parameters (for an elementary cell), cell-wise CHF analysis in bundles, and standard and nonstandard cells. Possible influence of wall thermophysical properties on CHF in dense assemblies and other effects are considered. Thermal interaction of nonequivalent cells and the effect of heat supply arrangement over the cell perimeter are analyzed. Special attention is paid to description of the effect the heat release nonuniformity along the channels has on CHF. Objectives to be pursued by studies of CHF in channels of different cross-section shapes are formulated.
The interplay between QSAR/QSPR studies and partial order ranking and formal concept analyses.
Carlsen, Lars
2009-04-17
The often observed scarcity of physical-chemical and well as toxicological data hampers the assessment of potentially hazardous chemicals released to the environment. In such cases Quantitative Structure-Activity Relationships/Quantitative Structure-Property Relationships (QSAR/QSPR) constitute an obvious alternative for rapidly, effectively and inexpensively generatng missing experimental values. However, typically further treatment of the data appears necessary, e.g., to elucidate the possible relations between the single compounds as well as implications and associations between the various parameters used for the combined characterization of the compounds under investigation. In the present paper the application of QSAR/QSPR in combination with Partial Order Ranking (POR) methodologies will be reviewed and new aspects using Formal Concept Analysis (FCA) will be introduced. Where POR constitutes an attractive method for, e.g., prioritizing a series of chemical substances based on a simultaneous inclusion of a range of parameters, FCA gives important information on the implications associations between the parameters. The combined approach thus constitutes an attractive method to a preliminary assessment of the impact on environmental and human health by primary pollutants or possibly by a primary pollutant well as a possible suite of transformation subsequent products that may be both persistent in and bioaccumulating and toxic. The present review focus on the environmental - and human health impact by residuals of the rocket fuel 1,1-dimethylhydrazine (heptyl) and its transformation products as an illustrative example.
Effect of Various Parameters on Evolution of 2D Free Jets and their Associated Entrainment Rates
NASA Astrophysics Data System (ADS)
Amin, Mazyar; Dabiri, Dana; Navaz, Homayun
2006-11-01
Refrigerated vertical display cases are extensively used in supermarkets and grocery stores. Cold air is supplied vertically across the open face of the display case from the top, creating a cold air curtain acting as a barrier to separate the cold air within the case from the warm ambient air. Typically, 70-80% of the load on these vertical display cases is due to cooling of infiltrated warm ambient air. Our goal is to understand parameters affecting warm air infiltration into the case so as to minimize the cooling load. Towards this end, steady state behavior of 2D vertical air jets at Reynolds numbers 2,000 to 10,000 with low and high turbulence intensities (0% &10%) at the nozzle exit are experimentally and computationally investigated both within a quiescent ambient and next to an open cavity. Four different velocity profile shapes (top-hat, parabola, skewed parabola and linear) at the jet exit are also studied to determine profile effects on the evolution of and entrainment into the jet. Results will be presented to show the effect of these parameters on the total entrainment into the jet, as well as the variation of entrainment across the jet at different downstream locations. The results of this work can help better understand how to design air curtains as a buffer to minimize infiltration into open refrigerated vertical display cases.
A 125 GeV fat Higgs at large tan β
Menon, Arjun; Raj, Nirmal
2015-12-02
In this paper, we study the viability of regions of large tan β within the frame-work of Fat Higgs/λ-SUSY Models. We compute the one-loop effective potential to find the corrections to the Higgs boson mass due to the heavy non-standard Higgs bosons. As the tree level contribution to the Higgs boson mass is suppressed at large tan β, these one-loop corrections are crucial to raising the Higgs boson mass to the measured LHC value. By raising the Higgsino and singlino mass parameters, typical electroweak precision constraints can also be avoided. We illustrate these new regions of Fat Higgs/λ-SUSY parameter spacemore » by finding regions of large tan β that are consistent with all experimental constraints including direct dark matter detection experiments, relic density limits and the invisible decay width of the Z boson. We find that there exist regions around λ = 1.25, tan β = 50 and a uniform psuedo-scalar 4 TeV ≲ M A ≲ 8 TeV which are consistent will all present phenomenological constraints. In this region the dark matter relic abundance and direct detection limits are satisfied by a lightest neutralino that is mostly bino or singlino. As an interesting aside we also find a region of low tan β and small singlino mass parameter where a well-tempered neutralino avoids all cosmological and direct detection constraints.« less
A 125 GeV fat Higgs at large tan β
DOE Office of Scientific and Technical Information (OSTI.GOV)
Menon, Arjun; Raj, Nirmal
In this paper, we study the viability of regions of large tan β within the frame-work of Fat Higgs/λ-SUSY Models. We compute the one-loop effective potential to find the corrections to the Higgs boson mass due to the heavy non-standard Higgs bosons. As the tree level contribution to the Higgs boson mass is suppressed at large tan β, these one-loop corrections are crucial to raising the Higgs boson mass to the measured LHC value. By raising the Higgsino and singlino mass parameters, typical electroweak precision constraints can also be avoided. We illustrate these new regions of Fat Higgs/λ-SUSY parameter spacemore » by finding regions of large tan β that are consistent with all experimental constraints including direct dark matter detection experiments, relic density limits and the invisible decay width of the Z boson. We find that there exist regions around λ = 1.25, tan β = 50 and a uniform psuedo-scalar 4 TeV ≲ M A ≲ 8 TeV which are consistent will all present phenomenological constraints. In this region the dark matter relic abundance and direct detection limits are satisfied by a lightest neutralino that is mostly bino or singlino. As an interesting aside we also find a region of low tan β and small singlino mass parameter where a well-tempered neutralino avoids all cosmological and direct detection constraints.« less
NASA Astrophysics Data System (ADS)
Daniell, R. E.; Strickland, D. J.; Decker, D. T.; Jasperse, J. R.; Carlson, H. C., Jr.
1985-04-01
The possible use of satellite ultraviolet measurements to deduce the ionospheric electron density profile (EDP) on a global basis is discussed. During 1984 comparisons were continued between the hybrid daytime ionospheric model and the experimental observations. These comparison studies indicate that: (1) the essential features of the EDP and certain UV emissions can be modelled; (2) the models are sufficiently sensitive to input parameters to yield poor agreement with observations when typical input values are used; (3) reasonable adjustments of the parameters can produce excellent agreement between theory and data for either EDP or airglow but not both; and (4) the qualitative understanding of the relationship between two input parameters (solar flux and neutral densities) and the model EDP and airglow features has been verified. The development of a hybrid dynamic model for the nighttime midlatitude ionosphere has been initiated. This model is similar to the daytime hybrid model, but uses the sunset EDP as an initial value and calculates the EDP as a function of time through the night. In addition, a semiempirical model has been developed, based on the assumption that the nighttime EDP is always well described by a modified Chapman function. This model has great simplicity and allows the EDP to be inferred in a straightforward manner from optical observations. Comparisons with data are difficult, however, because of the low intensity of the nightglow.
Laboratory reconnection experiments
NASA Astrophysics Data System (ADS)
Grulke, Olaf
Laboratory experiments dedicated for the study of magnetic reconnection have been contributed considerably to a more detailed understanding of the involved processes. Their strength is to disentangle parameter dependencies, to diagnose in detail the plasma and field response, and to form an excellent testbed for the validation of numerical simulations. In the present paper recent results obtained from the new cylindrical reconnection experiment VINETA II are presented. The experimental setup allows to independently vary plasma parameters, reconnection drive strength/timescale, and current sheet amplitude. Current research objectives focus on two major scientific issues: Guide field effects on magnetic reconnection and the evolution of electromagnetic fluctuations. The superimposed homogeneous magnetic guide field has a strong influence on the spatiotemporal evolution of the current sheet, predominantly due to magnetic pitch angle effects, which leads to a strong elongation of the sheet along the separatrices and results in axial gradients of the reconnection rates. Within the current sheet, incoherent electromagnetic fluctuations are observed. Their magnetic signature is characterized by a broad spectrum somewhat centered around the lower-hybrid frequency and extremely short spatial correlation lengths being typically smaller than the local ion sound radius. The fluctuation amplitude correlates with the local current density and, thus, for low guide fields, displays also axial gradients. Despite the quantitatively different parameter regime and geometry the basic fluctuation properties are in good agreement with studies conducted at the MRX experiment (PPPL).
NASA Astrophysics Data System (ADS)
Hassanimatin, M. M.; Tavassoli, S. H.
2018-05-01
A combination of electrical spark and laser induced breakdown spectroscopy (LIBS), which is called spark assisted LIBS (SA-LIBS), has shown its capability in plasma spectral emission enhancement. The aim of this paper is a detailed study of plasma emission to determine the effect of plasma and experimental parameters on increasing the spectral signal. An enhancement ratio of SA-LIBS spectral lines compared with LIBS is theoretically introduced. The parameters affecting the spectral enhancement ratio including ablated mass, plasma temperature, the lifetime of neutral and ionic spectral lines, plasma volume, and electron density are experimentally investigated and discussed. By substitution of the effective parameters, the theoretical spectral enhancement ratio is calculated and compared with the experimental one. Two samples of granite as a dielectric and aluminum as a metal at different laser pulse energies are studied. There is a good agreement between the calculated and the experimental enhancement ratio.
Code of Federal Regulations, 2013 CFR
2013-07-01
... 40 Protection of Environment 13 2013-07-01 2012-07-01 true Can I conduct short-term experimental... Plan § 63.2990 Can I conduct short-term experimental production runs that cause parameters to deviate from operating limits? With the approval of the Administrator, you may conduct short-term experimental...
Experimental and analytical determination of stability parameters for a balloon tethered in a wind
NASA Technical Reports Server (NTRS)
Redd, L. T.; Bennett, R. M.; Bland, S. R.
1973-01-01
Experimental and analytical techniques for determining stability parameters for a balloon tethered in a steady wind are described. These techniques are applied to a particular 7.64-meter-long balloon, and the results are presented. The stability parameters of interest appear as coefficients in linearized stability equations and are derived from the various forces and moments acting on the balloon. In several cases the results from the experimental and analytical techniques are compared and suggestions are given as to which techniques are the most practical means of determining values for the stability parameters.
Theoretical and experimental determination of K - and L -shell x-ray relaxation parameters in Ni
NASA Astrophysics Data System (ADS)
Guerra, M.; Sampaio, J. M.; Parente, F.; Indelicato, P.; Hönicke, P.; Müller, M.; Beckhoff, B.; Marques, J. P.; Santos, J. P.
2018-04-01
Fluorescence yields (FY) for the Ni K and L shells were determined by a theoretical and an experimental group within the framework of the International Initiative on X-ray Fundamental Parameters (FPs) collaboration. Coster-Kronig (CK) parameters were also measured for the L shell of Ni. Theoretical calculations of the same parameters were performed using the Dirac-Fock method, including relativistic and QED corrections. The experimental values for the FY and CK were determined at the PTB laboratory in the synchrotron radiation facility BESSY II, Berlin, Germany, and are compared to the corresponding calculated values.
Dideriksen, Jakob L.; Negro, Francesco; Enoka, Roger M.
2012-01-01
Motoneurons receive synaptic inputs from tens of thousands of connections that cause membrane potential to fluctuate continuously (synaptic noise), which introduces variability in discharge times of action potentials. We hypothesized that the influence of synaptic noise on force steadiness during voluntary contractions is limited to low muscle forces. The hypothesis was examined with an analytical description of transduction of motor unit spike trains into muscle force, a computational model of motor unit recruitment and rate coding, and experimental analysis of interspike interval variability during steady contractions with the abductor digiti minimi muscle. Simulations varied contraction force, level of synaptic noise, size of motor unit population, recruitment range, twitch contraction times, and level of motor unit short-term synchronization. Consistent with the analytical derivations, simulations and experimental data showed that force variability at target forces above a threshold was primarily due to low-frequency oscillations in neural drive, whereas the influence of synaptic noise was almost completely attenuated by two low-pass filters, one related to convolution of motoneuron spike trains with motor unit twitches (temporal summation) and the other attributable to summation of single motor unit forces (spatial summation). The threshold force above which synaptic noise ceased to influence force steadiness depended on recruitment range, size of motor unit population, and muscle contractile properties. This threshold was low (<10% of maximal force) for typical values of these parameters. Results indicate that motor unit recruitment and muscle properties of a typical muscle are tuned to limit the influence of synaptic noise on force steadiness to low forces and that the inability to produce a constant force during stronger contractions is mainly attributable to the common low-frequency oscillations in motoneuron discharge rates. PMID:22423000
How incorporation of scents could enhance immersive virtual experiences
Ischer, Matthieu; Baron, Naëm; Mermoud, Christophe; Cayeux, Isabelle; Porcherot, Christelle; Sander, David; Delplanque, Sylvain
2014-01-01
Under normal everyday conditions, senses all work together to create experiences that fill a typical person's life. Unfortunately for behavioral and cognitive researchers who investigate such experiences, standard laboratory tests are usually conducted in a nondescript room in front of a computer screen. They are very far from replicating the complexity of real world experiences. Recently, immersive virtual reality (IVR) environments became promising methods to immerse people into an almost real environment that involves more senses. IVR environments provide many similarities to the complexity of the real world and at the same time allow experimenters to constrain experimental parameters to obtain empirical data. This can eventually lead to better treatment options and/or new mechanistic hypotheses. The idea that increasing sensory modalities improve the realism of IVR environments has been empirically supported, but the senses used did not usually include olfaction. In this technology report, we will present an odor delivery system applied to a state-of-the-art IVR technology. The platform provides a three-dimensional, immersive, and fully interactive visualization environment called “Brain and Behavioral Laboratory—Immersive System” (BBL-IS). The solution we propose can reliably deliver various complex scents during different virtual scenarios, at a precise time and space and without contamination of the environment. The main features of this platform are: (i) the limited cross-contamination between odorant streams with a fast odor delivery (< 500 ms), (ii) the ease of use and control, and (iii) the possibility to synchronize the delivery of the odorant with pictures, videos or sounds. How this unique technology could be used to investigate typical research questions in olfaction (e.g., emotional elicitation, memory encoding or attentional capture by scents) will also be addressed. PMID:25101017
NASA Astrophysics Data System (ADS)
Dangelmayr, Martin A.; Reimus, Paul W.; Johnson, Raymond H.; Clay, James T.; Stone, James J.
2018-06-01
This research assesses the ability of a GC SCM to simulate uranium transport under variable geochemical conditions typically encountered at uranium in-situ recovery (ISR) sites. Sediment was taken from a monitoring well at the SRH site at depths 192 and 193 m below ground and characterized by XRD, XRF, TOC, and BET. Duplicate column studies on the different sediment depths, were flushed with synthesized restoration waters at two different alkalinities (160 mg/l CaCO3 and 360 mg/l CaCO3) to study the effect of alkalinity on uranium mobility. Uranium breakthrough occurred 25% - 30% earlier in columns with 360 mg/l CaCO3 over columns fed with 160 mg/l CaCO3 influent water. A parameter estimation program (PEST) was coupled to PHREEQC to derive site densities from experimental data. Significant parameter fittings were produced for all models, demonstrating that the GC SCM approach can model the impact of carbonate on uranium in flow systems. Derived site densities for the two sediment depths were between 141 and 178 μmol-sites/kg-soil, demonstrating similar sorption capacities despite heterogeneity in sediment mineralogy. Model sensitivity to alkalinity and pH was shown to be moderate compared to fitted site densities, when calcite saturation was allowed to equilibrate. Calcite kinetics emerged as a potential source of error when fitting parameters in flow conditions. Fitted results were compared to data from previous batch and column studies completed on sediments from the Smith-Ranch Highland (SRH) site, to assess variability in derived parameters. Parameters from batch experiments were lower by a factor of 1.1 to 3.4 compared to column studies completed on the same sediments. The difference was attributed to errors in solid-solution ratios and the impact of calcite dissolution in batch experiments. Column studies conducted at two different laboratories showed almost an order of magnitude difference in fitted site densities suggesting that experimental methodology may play a bigger role in column sorption behavior than actual sediment heterogeneity. Our results demonstrate the necessity for ISR sites to remove residual pCO2 and equilibrate restoration water with background geochemistry to reduce uranium mobility. In addition, the observed variability between fitted parameters on the same sediments highlights the need to provide standardized guidelines and methodology for regulators and industry when the GC SCM approach is used for ISR risk assessments.
Dangelmayr, Martin A; Reimus, Paul W; Johnson, Raymond H; Clay, James T; Stone, James J
2018-06-01
This research assesses the ability of a GC SCM to simulate uranium transport under variable geochemical conditions typically encountered at uranium in-situ recovery (ISR) sites. Sediment was taken from a monitoring well at the SRH site at depths 192 and 193 m below ground and characterized by XRD, XRF, TOC, and BET. Duplicate column studies on the different sediment depths, were flushed with synthesized restoration waters at two different alkalinities (160 mg/l CaCO 3 and 360 mg/l CaCO 3 ) to study the effect of alkalinity on uranium mobility. Uranium breakthrough occurred 25% - 30% earlier in columns with 360 mg/l CaCO 3 over columns fed with 160 mg/l CaCO 3 influent water. A parameter estimation program (PEST) was coupled to PHREEQC to derive site densities from experimental data. Significant parameter fittings were produced for all models, demonstrating that the GC SCM approach can model the impact of carbonate on uranium in flow systems. Derived site densities for the two sediment depths were between 141 and 178 μmol-sites/kg-soil, demonstrating similar sorption capacities despite heterogeneity in sediment mineralogy. Model sensitivity to alkalinity and pH was shown to be moderate compared to fitted site densities, when calcite saturation was allowed to equilibrate. Calcite kinetics emerged as a potential source of error when fitting parameters in flow conditions. Fitted results were compared to data from previous batch and column studies completed on sediments from the Smith-Ranch Highland (SRH) site, to assess variability in derived parameters. Parameters from batch experiments were lower by a factor of 1.1 to 3.4 compared to column studies completed on the same sediments. The difference was attributed to errors in solid-solution ratios and the impact of calcite dissolution in batch experiments. Column studies conducted at two different laboratories showed almost an order of magnitude difference in fitted site densities suggesting that experimental methodology may play a bigger role in column sorption behavior than actual sediment heterogeneity. Our results demonstrate the necessity for ISR sites to remove residual pCO2 and equilibrate restoration water with background geochemistry to reduce uranium mobility. In addition, the observed variability between fitted parameters on the same sediments highlights the need to provide standardized guidelines and methodology for regulators and industry when the GC SCM approach is used for ISR risk assessments. Copyright © 2018 Elsevier B.V. All rights reserved.
Kityk, A V
2014-07-15
A long-range-corrected time-dependent density functional theory (LC-TDDFT) in combination with polarizable continuum model (PCM) have been applied to study charge transfer (CT) optical absorption and fluorescence emission energies basing on parameterized LC-BLYP xc-potential. The molecule of 4-(9-acridyl)julolidine selected for this study represents typical CT donor-acceptor dye with strongly solvent dependent optical absorption and fluorescence emission spectra. The result of calculations are compared with experimental spectra reported in the literature to derive an optimal value of the model screening parameter ω. The first absorption band appears to be quite well predictable within DFT/TDDFT/PCM with the screening parameter ω to be solvent independent (ω ≈ 0.245 Bohr(-1)) whereas the fluorescence emission exhibits a strong dependence on the range separation with ω-value varying on a rising solvent polarity from about 0.225 to 0.151 Bohr(-1). Dipolar properties of the initial state participating in the electronic transition have crucial impact on the effective screening. Copyright © 2014 Elsevier B.V. All rights reserved.
Development of Magnetorheological Resistive Exercise Device for Rowing Machine
Žiliukas, Pranas
2016-01-01
Training equipment used by professional sportsmen has a great impact on their sport performance. Most universal exercisers may help only to improve the general physical condition due to the specific kinematics and peculiar resistance generated by their loading units. Training of effective techniques and learning of psychomotor skills are possible only when exercisers conform to the movements and resistance typical for particular sports kinematically and dynamically. Methodology of developing a magnetorheological resistive exercise device for generating the desired law of passive resistance force and its application in a lever-type rowing machine are described in the paper. The structural parameters of a controllable hydraulic cylinder type device were found by means of the computational fluid dynamics simulation performed by ANSYS CFX software. Parameters describing the magnetorheological fluid as non-Newtonian were determined by combining numerical and experimental research of the resistance force generated by the original magnetorheological damper. A structural scheme of the device control system was developed and the variation of the strength of magnetic field that affects the magnetorheological fluid circulating in the device was determined, ensuring a variation of the resistance force on the oar handle adequate for the resistance that occurs during a real boat rowing stroke. PMID:27293479
Development of Magnetorheological Resistive Exercise Device for Rowing Machine.
Grigas, Vytautas; Šulginas, Anatolijus; Žiliukas, Pranas
2015-01-01
Training equipment used by professional sportsmen has a great impact on their sport performance. Most universal exercisers may help only to improve the general physical condition due to the specific kinematics and peculiar resistance generated by their loading units. Training of effective techniques and learning of psychomotor skills are possible only when exercisers conform to the movements and resistance typical for particular sports kinematically and dynamically. Methodology of developing a magnetorheological resistive exercise device for generating the desired law of passive resistance force and its application in a lever-type rowing machine are described in the paper. The structural parameters of a controllable hydraulic cylinder type device were found by means of the computational fluid dynamics simulation performed by ANSYS CFX software. Parameters describing the magnetorheological fluid as non-Newtonian were determined by combining numerical and experimental research of the resistance force generated by the original magnetorheological damper. A structural scheme of the device control system was developed and the variation of the strength of magnetic field that affects the magnetorheological fluid circulating in the device was determined, ensuring a variation of the resistance force on the oar handle adequate for the resistance that occurs during a real boat rowing stroke.
Optimising the inactivation of grape juice spoilage organisms by pulse electric fields.
Marsellés-Fontanet, A Robert; Puig, Anna; Olmos, Paola; Mínguez-Sanz, Santiago; Martín-Belloso, Olga
2009-04-15
The effect of some pulsed electric field (PEF) processing parameters (electric field strength, pulse frequency and treatment time), on a mixture of microorganisms (Kloeckera apiculata, Saccharomyces cerevisiae, Lactobacillus plantarum, Lactobacillus hilgardii and Gluconobacter oxydans) typically present in grape juice and wine were evaluated. An experimental design based on response surface methodology (RSM) was used and results were also compared with those of a factorially designed experiment. The relationship between the levels of inactivation of microorganisms and the energy applied to the grape juice was analysed. Yeast and bacteria were inactivated by the PEF treatments, with reductions that ranged from 2.24 to 3.94 log units. All PEF parameters affected microbial inactivation. Optimal inactivation of the mixture of spoilage microorganisms was predicted by the RSM models at 35.0 kV cm(-1) with 303 Hz pulse width for 1 ms. Inactivation was greater for yeasts than for bacteria, as was predicted by the RSM. The maximum efficacy of the PEF treatment for inactivation of microorganisms in grape juice was observed around 1500 MJ L(-1) for all the microorganisms investigated. The RSM could be used in the fruit juice industry to optimise the inactivation of spoilage microorganisms by PEF.
A full-scale STOVL ejector experiment
NASA Technical Reports Server (NTRS)
Barankiewicz, Wendy S.
1993-01-01
The design and development of thrust augmenting short take-off and vertical landing (STOVL) ejectors has typically been an iterative process. In this investigation, static performance tests of a full-scale vertical lift ejector were performed at primary flow temperatures up to 1560 R (1100 F). Flow visualization (smoke generators, yarn tufts and paint dots) was used to assess inlet flowfield characteristics, especially around the primary nozzle and end plates. Performance calculations are presented for ambient temperatures close to 480 R (20 F) and 535 R (75 F) which simulate 'seasonal' aircraft operating conditions. Resulting thrust augmentation ratios are presented as functions of nozzle pressure ratio and temperature. Full-scale experimental tests such as this are expensive, and difficult to implement at engine exhaust temperatures. For this reason the utility of using similarity principles -- in particular, the Munk and Prim similarity principle for isentropic flow -- was explored. At different primary temperatures, exit pressure contours are compared for similarity. A nondimensional flow parameter is then shown to eliminate primary nozzle temperature dependence and verify similarity between the hot and cold flow experiments. Under the assumption that an appropriate similarity principle can be established, then properly chosen performance parameters should be similar for both hot flow and cold flow model tests.
Model Fit to Experimental Data for Foam-Assisted Deep Vadose Zone Remediation
DOE Office of Scientific and Technical Information (OSTI.GOV)
Roostapour, A.; Lee, G.; Zhong, Lirong
2014-01-15
Foam has been regarded as a promising means of remeidal amendment delivery to overcome subsurface heterogeneity in subsurface remediation processes. This study investigates how a foam model, developed by Method of Characteristics and fractional flow analysis in the companion paper of Roostapour and Kam (2012), can be applied to make a fit to a set of existing laboratory flow experiments (Zhong et al., 2009) in an application relevant to deep vadose zone remediation. This study reveals a few important insights regarding foam-assisted deep vadose zone remediation: (i) the mathematical framework established for foam modeling can fit typical flow experiments matchingmore » wave velocities, saturation history , and pressure responses; (ii) the set of input parameters may not be unique for the fit, and therefore conducting experiments to measure basic model parameters related to relative permeability, initial and residual saturations, surfactant adsorption and so on should not be overlooked; and (iii) gas compressibility plays an important role for data analysis, thus should be handled carefully in laboratory flow experiments. Foam kinetics, causing foam texture to reach its steady-state value slowly, may impose additional complications.« less
Misichronis, Konstantinos; Chen, Jihua; Imel, Adam; ...
2017-03-15
A series of linear diblock copolymers containing polystyrene (PS) and poly(1,3-cyclohexadiene) (PCHD) with high 1,4-microstructure (>87%) was synthesized by anionic polymerization and high vacuum techniques. Microphase separation in the bulk was examined in this paper by transmission electron microscopy (TEM) and small-angle X-ray scattering (SAXS) and compared to computational analysis of the predicted morphological phase diagram for this system. Because of the high conformational asymmetry between PS and PCHD, these materials self-assemble into typical morphologies expected for linear diblock copolymer systems and atypical structures. Rheological measurements were conducted and revealed order–disorder transition temperatures (T ODT), for the first time formore » PS-b-PCHD copolymers, resulting in a working expression for the effective interaction parameter χ eff = 32/T – 0.016. Furthermore, we performed computational studies that coincide with the experimental results. Finally, these copolymers exhibit well-ordered structures even at high temperatures (~260 °C) therefore providing a better insight concerning their microphase separation at the nanoscale which is important for their potential use in nanotechnology and/or nanolithography applications.« less
Fractional order implementation of Integral Resonant Control - A nanopositioning application.
San-Millan, Andres; Feliu-Batlle, Vicente; Aphale, Sumeet S
2017-10-04
By exploiting the co-located sensor-actuator arrangement in typical flexure-based piezoelectric stack actuated nanopositioners, the polezero interlacing exhibited by their axial frequency response can be transformed to a zero-pole interlacing by adding a constant feed-through term. The Integral Resonant Control (IRC) utilizes this unique property to add substantial damping to the dominant resonant mode by the use of a simple integrator implemented in closed loop. IRC used in conjunction with an integral tracking scheme, effectively reduces positioning errors introduced by modelling inaccuracies or parameter uncertainties. Over the past few years, successful application of the IRC control technique to nanopositioning systems has demonstrated performance robustness, easy tunability and versatility. The main drawback has been the relatively small positioning bandwidth achievable. This paper proposes a fractional order implementation of the classical integral tracking scheme employed in tandem with the IRC scheme to deliver damping and tracking. The fractional order integrator introduces an additional design parameter which allows desired pole-placement, resulting in superior closed loop bandwidth. Simulations and experimental results are presented to validate the theory. A 250% improvement in the achievable positioning bandwidth is observed with proposed fractional order scheme. Copyright © 2017. Published by Elsevier Ltd.
Bayesian multivariate Poisson abundance models for T-cell receptor data.
Greene, Joshua; Birtwistle, Marc R; Ignatowicz, Leszek; Rempala, Grzegorz A
2013-06-07
A major feature of an adaptive immune system is its ability to generate B- and T-cell clones capable of recognizing and neutralizing specific antigens. These clones recognize antigens with the help of the surface molecules, called antigen receptors, acquired individually during the clonal development process. In order to ensure a response to a broad range of antigens, the number of different receptor molecules is extremely large, resulting in a huge clonal diversity of both B- and T-cell receptor populations and making their experimental comparisons statistically challenging. To facilitate such comparisons, we propose a flexible parametric model of multivariate count data and illustrate its use in a simultaneous analysis of multiple antigen receptor populations derived from mammalian T-cells. The model relies on a representation of the observed receptor counts as a multivariate Poisson abundance mixture (m PAM). A Bayesian parameter fitting procedure is proposed, based on the complete posterior likelihood, rather than the conditional one used typically in similar settings. The new procedure is shown to be considerably more efficient than its conditional counterpart (as measured by the Fisher information) in the regions of m PAM parameter space relevant to model T-cell data. Copyright © 2013 Elsevier Ltd. All rights reserved.
Mode conversion in three ion species ICRF heating scenario
NASA Astrophysics Data System (ADS)
Lin, Y.; Edlund, E.; Ennever, P.; Porkolab, M.; Wright, J.; Wukitch, S.
2016-10-01
Three-ion species ICRF heating has been studied on Alcator C-Mod and on JET. It has been shown to heat the plasma and generate energetic particles. In a typical three-ion scenario, the plasma consists of 60-70% D, 30-40% H and a trace level (1% or less) of 3He. This species mixture creates two hybrid resonances (D-3He and 3He-H) in the plasma, in the vicinity of the 3He IC resonance (on both sides). The fast wave can undergo mode conversion (MC) to ion Bernstein waves and ion cyclotron waves at the two hybrid resonances. A phase contrast imaging (PCI) system has been used to measure the RF waves in the three-ion heating experiment. The experimentally measured MC locations and the separating distance between the two MC regions help to determine the concentration of the three species. The PCI signal amplitudes for the RF waves are found to be sensitive to RF and plasma parameters, including PRF, Te, ne and also the species mix concentration. The parameter dependences found in the experiment will be compared with ICRF code simulations. Supported by USDoE Awards DE-FC02-99ER54512 and DE-FG02-94-ER54235.
Initiating heavy-atom-based phasing by multi-dimensional molecular replacement.
Pedersen, Bjørn Panyella; Gourdon, Pontus; Liu, Xiangyu; Karlsen, Jesper Lykkegaard; Nissen, Poul
2016-03-01
To obtain an electron-density map from a macromolecular crystal the phase problem needs to be solved, which often involves the use of heavy-atom derivative crystals and concomitant heavy-atom substructure determination. This is typically performed by dual-space methods, direct methods or Patterson-based approaches, which however may fail when only poorly diffracting derivative crystals are available. This is often the case for, for example, membrane proteins. Here, an approach for heavy-atom site identification based on a molecular-replacement parameter matrix (MRPM) is presented. It involves an n-dimensional search to test a wide spectrum of molecular-replacement parameters, such as different data sets and search models with different conformations. Results are scored by the ability to identify heavy-atom positions from anomalous difference Fourier maps. The strategy was successfully applied in the determination of a membrane-protein structure, the copper-transporting P-type ATPase CopA, when other methods had failed to determine the heavy-atom substructure. MRPM is well suited to proteins undergoing large conformational changes where multiple search models should be considered, and it enables the identification of weak but correct molecular-replacement solutions with maximum contrast to prime experimental phasing efforts.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Fast, Ivan; Bosbach, Dirk; Aksyutina, Yuliya
A requisite for the official approval of the safe final disposal of SNF is a comprehensive specification and declaration of the nuclear inventory in SNF by the waste supplier. In the verification process both the values of the radionuclide (RN) activities and their uncertainties are required. Burn-up (BU) calculations based on typical and generic reactor operational parameters do not encompass any possible uncertainties observed in real reactor operations. At the same time, the details of the irradiation history are often not well known, which complicates the assessment of declared RN inventories. Here, we have compiled a set of burnup calculationsmore » accounting for the operational history of 339 published or anonymized real PWR fuel assemblies (FA). These histories were used as a basis for a 'SRP analysis', to provide information about the range of the values of the associated secondary reactor parameters (SRP's). Hence, we can calculate the realistic variation or spectrum of RN inventories. SCALE 6.1 has been employed for the burn-up calculations. The results have been validated using experimental data from the online database - SFCOMPO-1 and -2. (authors)« less
Stabilization of photon collapse and revival dynamics by a non-Markovian phonon bath
NASA Astrophysics Data System (ADS)
Carmele, Alexander; Knorr, Andreas; Milde, Frank
2013-10-01
Solid state-based light emitters such as semiconductor quantum dots (QDs) have been demonstrated to be versatile candidates to study the fundamentals of light-matter interaction. In contrast to optics with isolated atomic systems, in the solid-state dissipative processes are induced by the inherent coupling to the environment and are typically perceived as a major obstacle toward stable performances in experiments and applications. In this theoretical model study we show that this is not necessarily the case. In fact, in certain parameter regimes, the memory of the solid-state environment can enhance coherent quantum optical effects. In particular, we demonstrate that the non-Markovian coupling to an incoherent phonon bath can exhibit a stabilizing effect on the coherent QD cavity-quantum electrodynamics by inhibiting irregular oscillations and allowing for regular collapse and revival patterns. For self-assembled GaAs/InAs QDs at low photon numbers we predict dynamics that deviate dramatically from the well-known atomic Jaynes-Cummings model. Even if the required sample parameters are not yet available in recent experimental achievements, we believe our proposal opens the way to a systematic and deliberate design of photon quantum effects via specifically engineered solid-state environments.
Towards Structural Analysis of Audio Recordings in the Presence of Musical Variations
NASA Astrophysics Data System (ADS)
Müller, Meinard; Kurth, Frank
2006-12-01
One major goal of structural analysis of an audio recording is to automatically extract the repetitive structure or, more generally, the musical form of the underlying piece of music. Recent approaches to this problem work well for music, where the repetitions largely agree with respect to instrumentation and tempo, as is typically the case for popular music. For other classes of music such as Western classical music, however, musically similar audio segments may exhibit significant variations in parameters such as dynamics, timbre, execution of note groups, modulation, articulation, and tempo progression. In this paper, we propose a robust and efficient algorithm for audio structure analysis, which allows to identify musically similar segments even in the presence of large variations in these parameters. To account for such variations, our main idea is to incorporate invariance at various levels simultaneously: we design a new type of statistical features to absorb microvariations, introduce an enhanced local distance measure to account for local variations, and describe a new strategy for structure extraction that can cope with the global variations. Our experimental results with classical and popular music show that our algorithm performs successfully even in the presence of significant musical variations.
Fluctuations of radio occultation signals in sounding the Earth's atmosphere
NASA Astrophysics Data System (ADS)
Kan, Valery; Gorbunov, Michael E.; Sofieva, Viktoria F.
2018-02-01
We discuss the relationships that link the observed fluctuation spectra of the amplitude and phase of signals used for the radio occultation sounding of the Earth's atmosphere, with the spectra of atmospheric inhomogeneities. Our analysis employs the approximation of the phase screen and of weak fluctuations. We make our estimates for the following characteristic inhomogeneity types: (1) the isotropic Kolmogorov turbulence and (2) the anisotropic saturated internal gravity waves. We obtain the expressions for the variances of the amplitude and phase fluctuations of radio occultation signals as well as their estimates for the typical parameters of inhomogeneity models. From the GPS/MET observations, we evaluate the spectra of the amplitude and phase fluctuations in the altitude interval from 4 to 25 km in the middle and polar latitudes. As indicated by theoretical and experimental estimates, the main contribution into the radio signal fluctuations comes from the internal gravity waves. The influence of the Kolmogorov turbulence is negligible. We derive simple relationships that link the parameters of internal gravity waves and the statistical characteristics of the radio signal fluctuations. These results may serve as the basis for the global monitoring of the wave activity in the stratosphere and upper troposphere.
NASA Astrophysics Data System (ADS)
Fernandez, Eduardo; Borelli, Noah; Cappelli, Mark; Gascon, Nicolas
2003-10-01
Most current Hall thruster simulation efforts employ either 1D (axial), or 2D (axial and radial) codes. These descriptions crucially depend on the use of an ad-hoc perpendicular electron mobility. Several models for the mobility are typically invoked: classical, Bohm, empirically based, wall-induced, as well as combinations of the above. Experimentally, it is observed that fluctuations and electron transport depend on axial distance and operating parameters. Theoretically, linear stability analyses have predicted a number of unstable modes; yet the nonlinear character of the fluctuations and/or their contribution to electron transport remains poorly understood. Motivated by these observations, a 2D code in the azimuthal and axial coordinates has been written. In particular, the simulation self-consistently calculates the azimuthal disturbances resulting in fluctuating drifts, which in turn (if properly correlated with plasma density disturbances) result in fluctuation-driven electron transport. The characterization of the turbulence at various operating parameters and across the channel length is also the object of this study. A description of the hybrid code used in the simulation as well as the initial results will be presented.
Initiating heavy-atom-based phasing by multi-dimensional molecular replacement
Pedersen, Bjørn Panyella; Gourdon, Pontus; Liu, Xiangyu; Karlsen, Jesper Lykkegaard; Nissen, Poul
2016-01-01
To obtain an electron-density map from a macromolecular crystal the phase problem needs to be solved, which often involves the use of heavy-atom derivative crystals and concomitant heavy-atom substructure determination. This is typically performed by dual-space methods, direct methods or Patterson-based approaches, which however may fail when only poorly diffracting derivative crystals are available. This is often the case for, for example, membrane proteins. Here, an approach for heavy-atom site identification based on a molecular-replacement parameter matrix (MRPM) is presented. It involves an n-dimensional search to test a wide spectrum of molecular-replacement parameters, such as different data sets and search models with different conformations. Results are scored by the ability to identify heavy-atom positions from anomalous difference Fourier maps. The strategy was successfully applied in the determination of a membrane-protein structure, the copper-transporting P-type ATPase CopA, when other methods had failed to determine the heavy-atom substructure. MRPM is well suited to proteins undergoing large conformational changes where multiple search models should be considered, and it enables the identification of weak but correct molecular-replacement solutions with maximum contrast to prime experimental phasing efforts. PMID:26960131
Implementation of EPICS based vacuum control system for variable energy cyclotron centre, Kolkata
DOE Office of Scientific and Technical Information (OSTI.GOV)
Roy, Anindya, E-mail: r-ani@vecc.gov.in; Bhole, R. B.; Nandy, Partha P.
2015-03-15
The vacuum system of the Room Temperature (K = 130) Cyclotron of Variable Energy Cyclotron Centre is comprised of vacuum systems of main machine and Beam Transport System. The vacuum control system is upgraded to a PLC based Automated system from the initial relay based Manual system. The supervisory control of the vacuum system is implemented in Experimental Physics and Industrial Control System (EPICS). An EPICS embedded ARM based vacuum gauge controller is developed to mitigate the requirement of vendor specific gauge controller for gauges and also for seamless integration of the gauge controllers with the control system. A setmore » of MS-Windows ActiveX components with embedded EPICS Channel Access interface are developed to build operator interfaces with less complex programming and to incorporate typical Windows feature, e.g., user authentication, file handling, better fonts, colors, mouse actions etc. into the operator interfaces. The control parameters, monitoring parameters, and system interlocks of the system are archived in MySQL based EPICS MySQL Archiver developed indigenously. In this paper, we describe the architecture, the implementation details, and the performance of the system.« less
A novel chaos-based image encryption algorithm using DNA sequence operations
NASA Astrophysics Data System (ADS)
Chai, Xiuli; Chen, Yiran; Broyde, Lucie
2017-01-01
An image encryption algorithm based on chaotic system and deoxyribonucleic acid (DNA) sequence operations is proposed in this paper. First, the plain image is encoded into a DNA matrix, and then a new wave-based permutation scheme is performed on it. The chaotic sequences produced by 2D Logistic chaotic map are employed for row circular permutation (RCP) and column circular permutation (CCP). Initial values and parameters of the chaotic system are calculated by the SHA 256 hash of the plain image and the given values. Then, a row-by-row image diffusion method at DNA level is applied. A key matrix generated from the chaotic map is used to fuse the confused DNA matrix; also the initial values and system parameters of the chaotic system are renewed by the hamming distance of the plain image. Finally, after decoding the diffused DNA matrix, we obtain the cipher image. The DNA encoding/decoding rules of the plain image and the key matrix are determined by the plain image. Experimental results and security analyses both confirm that the proposed algorithm has not only an excellent encryption result but also resists various typical attacks.
An improved swarm optimization for parameter estimation and biological model selection.
Abdullah, Afnizanfaizal; Deris, Safaai; Mohamad, Mohd Saberi; Anwar, Sohail
2013-01-01
One of the key aspects of computational systems biology is the investigation on the dynamic biological processes within cells. Computational models are often required to elucidate the mechanisms and principles driving the processes because of the nonlinearity and complexity. The models usually incorporate a set of parameters that signify the physical properties of the actual biological systems. In most cases, these parameters are estimated by fitting the model outputs with the corresponding experimental data. However, this is a challenging task because the available experimental data are frequently noisy and incomplete. In this paper, a new hybrid optimization method is proposed to estimate these parameters from the noisy and incomplete experimental data. The proposed method, called Swarm-based Chemical Reaction Optimization, integrates the evolutionary searching strategy employed by the Chemical Reaction Optimization, into the neighbouring searching strategy of the Firefly Algorithm method. The effectiveness of the method was evaluated using a simulated nonlinear model and two biological models: synthetic transcriptional oscillators, and extracellular protease production models. The results showed that the accuracy and computational speed of the proposed method were better than the existing Differential Evolution, Firefly Algorithm and Chemical Reaction Optimization methods. The reliability of the estimated parameters was statistically validated, which suggests that the model outputs produced by these parameters were valid even when noisy and incomplete experimental data were used. Additionally, Akaike Information Criterion was employed to evaluate the model selection, which highlighted the capability of the proposed method in choosing a plausible model based on the experimental data. In conclusion, this paper presents the effectiveness of the proposed method for parameter estimation and model selection problems using noisy and incomplete experimental data. This study is hoped to provide a new insight in developing more accurate and reliable biological models based on limited and low quality experimental data.
Trame, MN; Lesko, LJ
2015-01-01
A systems pharmacology model typically integrates pharmacokinetic, biochemical network, and systems biology concepts into a unifying approach. It typically consists of a large number of parameters and reaction species that are interlinked based upon the underlying (patho)physiology and the mechanism of drug action. The more complex these models are, the greater the challenge of reliably identifying and estimating respective model parameters. Global sensitivity analysis provides an innovative tool that can meet this challenge. CPT Pharmacometrics Syst. Pharmacol. (2015) 4, 69–79; doi:10.1002/psp4.6; published online 25 February 2015 PMID:27548289
Chen, Mingjun; Liu, Henan; Cheng, Jian; Yu, Bo; Fang, Zhen
2017-07-01
In order to achieve the deterministic finishing of optical components with concave surfaces of a curvature radius less than 10 mm, a novel magnetorheological finishing (MRF) process using a small ball-end permanent-magnet polishing head with a diameter of 4 mm is introduced. The characteristics of material removal in the proposed MRF process are studied. The model of the material removal function for the proposed MRF process is established based on the three-dimensional hydrodynamics analysis and Preston's equation. The shear stress on the workpiece surface is calculated by means of resolving the presented mathematical model using a numerical solution method. The analysis result reveals that the material removal in the proposed MRF process shows a positive dependence on shear stress. Experimental research is conducted to investigate the effect of processing parameters on the material removal rate and improve the surface accuracy of a typical rotational symmetrical optical component. The experimental results show that the surface accuracy of the finished component of K9 glass material has been improved to 0.14 μm (PV) from the initial 0.8 μm (PV), and the finished surface roughness Ra is 0.0024 μm. It indicates that the proposed MRF process can be used to achieve the deterministic removal of surface material and perform the nanofinishing of small curvature radius concave surfaces.
A constitutive model for the mechanical characterization of the plantar fascia.
Natali, Arturo N; Pavan, Piero G; Stecco, Carla
2010-10-01
A constitutive model is proposed to describe the mechanical behavior of the plantar fascia. The mechanical characterization of the plantar fascia regards the role in the foot biomechanics and it is involved in many alterations of its functional behavior, both of mechanical and nonmechanical origin. The structural conformation of the plantar fascia in its middle part is characterized by the presence of collagen fibers reinforcing the tissue along a preferential orientation, which is that supporting the major loading. According to this anatomical evidence, the tissue is described by developing an isotropic fiber-reinforced constitutive model and since the elastic response of the fascia is here considered, the constitutive model is based on the theory of hyperelasticity. The model is consistent with a kinematical description of large strains mechanical behavior, which is typical of soft tissues. A fitting procedure of the constitutive model is implemented making use of experimental curves taken from the literature and referring to specimens of human plantar fascia. A satisfactory fitting of the tensile behavior of the plantar fascia has been performed, showing that the model correctly interprets the mechanical behavior of the tissue in the light of comparison to experimental data at disposal. A critical analysis of the model with respect to the problem of the identification of the constitutive parameters is proposed as the basis for planning a future experimental investigation of mechanical behavior of the plantar fascia.
NASA Astrophysics Data System (ADS)
Wang, M.; Cole, M. O. T.; Keogh, P. S.
2017-11-01
A new approach for the recovery of contact-free levitation of a rotor supported by active magnetic bearings (AMB) is assessed through control strategy design, system modelling and experimental verification. The rotor is considered to make contact with a touchdown bearing (TDB), which may lead to entrapment in a bi-stable nonlinear response. A linear matrix inequality (LMI) based gain-scheduling H∞ control technique is introduced to recover the rotor to a contact-free state. The controller formulation involves a time-varying effective stiffness parameter, which can be evaluated in terms of forces transmitted through the TDB. Rather than measuring these forces directly, an observer is introduced with a model of the base structure to transform base acceleration signals using polytopic coordinates for controller adjustment. Force transmission to the supporting base structure will occur either through an AMB alone without contact, or through the AMB and TDB with contact and this must be accounted for in the observer design. The controller is verified experimentally in terms of (a) non-contact robust stability and vibration suppression performance; (b) control action for contact-free recovery at typical running speeds with various unbalance and TDB misalignment conditions; and (c) coast-down experimental tests. The results demonstrate the effectiveness of the AMB control action whenever it operates within its dynamic load capacity.
Lithium Battery Transient Response as a Diagnostic Tool
NASA Astrophysics Data System (ADS)
Denisov, E.; Nigmatullin, R.; Evdokimov, Y.; Timergalina, G.
2018-05-01
Lithium batteries are currently used as the main energy storage for electronic devices. Progress in the field of portable electronic devices is significantly determined by the improvement of their weight/dimensional characteristics and specific capacity. In addition to the high reliability required of lithium batteries, in some critical applications proper diagnostics are required. Corresponding techniques allow prediction and prevention of operation interruption and avoidance of expensive battery replacement, and also provide additional benefits. Many effective diagnostic methods have been suggested; however, most of them require expensive experimental equipment, as well as interruption or strong perturbation of the operating mode. In the framework of this investigation, a simple diagnostic method based on analysis of transient processes is proposed. The transient response is considered as a reaction to an applied load variation that typically corresponds to normal operating conditions for most real applications. The transient response contains the same information as the impedance characteristic for the system operating in linear mode. Taking into account the large number of publications describing the impedance response associated with diagnostic methods, it can be assumed that the transient response contains a sufficient amount of information for creation of effective diagnostic systems. The proposed experimental installation is based on a controlled load, providing current variation, measuring equipment, and data processing electronics. It is proposed to use the second exponent parameters U 2 and β to estimate the state of charge for secondary lithium batteries. The proposed method improves the accuracy and reliability of a set of quantitative parameters associated with electrochemical energy sources.
Microphysically Derived Expressions for Rate-and-State Friction Parameters, a, b, and Dc
NASA Astrophysics Data System (ADS)
Chen, Jianye; Niemeijer, A. R.; Spiers, Christopher J.
2017-12-01
Rate-and-state friction (RSF) laws are extensively applied in fault mechanics but have a largely empirical basis reflecting only limited understanding of the underlying physical mechanisms. We recently proposed a microphysical model describing the frictional behavior of a granular fault gouge undergoing deformation in terms of granular flow accompanied by thermally activated creep and intergranular sliding at grain contacts. Numerical solutions reproduced typical experimental results well. Here we extend our model to obtain physically meaningful, analytical expressions for the steady state frictional strength and standard RSF parameters, a, b, and Dc. The frictional strength contains two components, namely, grain boundary friction and friction due to intergranular dilatation. The expressions obtained for a and b linearly reflect the rate dependence of these two terms. Dc scales with slip band thickness and varies only slightly with velocity. The values of a, b, and Dc predicted show quantitative agreement with previous experimental results, and inserting their values into classical RSF laws gives simulated friction behavior that is consistent with the predictions of our numerically implemented model for small departures from steady state. For large velocity steps, the model produces mixed RSF behavior that falls between the Slowness and Slip laws, for example, with an intermediate equivalent slip(-weakening) distance d0. Our model possesses the interesting property not only that a and b are velocity dependent but also that Dc and d0 scale differently from classical RSF models, potentially explaining behaviour seen in many hydrothermal friction experiments and having substantial implications for natural fault friction.
Sandoval-Perez, Angelica; Pluhackova, Kristyna; Böckmann, Rainer A
2017-05-09
Molecular dynamics (MD) simulations offer the possibility to study biological processes at high spatial and temporal resolution often not reachable by experiments. Corresponding biomolecular force field parameters have been developed for a wide variety of molecules ranging from inorganic ligands and small organic molecules over proteins and lipids to nucleic acids. Force fields have typically been parametrized and validated on thermodynamic observables and structural characteristics of individual compounds, e.g. of soluble proteins or lipid bilayers. Less strictly, due to the added complexity and missing experimental data to compare to, force fields have hardly been tested on the properties of mixed systems, e.g. on protein-lipid systems. Their selection and combination for mixed systems is further complicated by the partially differing parametrization strategies. Additionally, the presence of other compounds in the system may shift the subtle balance of force field parameters. Here, we assessed the protein-lipid interactions as described in the four atomistic force fields GROMOS54a7, CHARMM36 and the two force field combinations Amber14sb/Slipids and Amber14sb/Lipid14. Four observables were compared, focusing on the membrane-water interface: the conservation of the secondary structure of transmembrane proteins, the positioning of transmembrane peptides relative to the lipid bilayer, the insertion depth of side chains of unfolded peptides absorbed at the membrane interface, and the ability to reproduce experimental insertion energies of Wimley-White peptides at the membrane interface. Significant differences between the force fields were observed that affect e.g. membrane insertion depths and tilting of transmembrane peptides.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Lai, King C.; Liu, Da-Jiang; Thiel, Patricia A.
Diffusion coefficients, D N, for 2D vacancy nanopits are compared with those for 2D homoepitaxial adatom nanoislands on metal(100) surfaces, focusing on the variation of DN with size, N. Here, N is measured in missing atoms for pits and adatoms for islands. Analysis of D N is based on kinetic Monte Carlo simulations of a tailored stochastic lattice-gas model, where pit and island diffusion are mediated by periphery diffusion, i.e., by edge atom hopping. Precise determination of D N versus N for typical parameters reveals a cyclical variation with an overall decrease in magnitude for increasing moderate O(10 2) ≤more » N ≤ O(10 3). Monotonic decay, D N~ N -β, is found for N ≥ O(10 2) with effective exponents, β = β eff, for both pits and islands, both well below the macroscopic value of βmacro = 3/2. D N values for vacancy pits are significantly lower (higher) than for adatom islands for moderate N in the case of low (high) kink rounding barrier. However, D N values for pits and islands slowly merge, and β eff → 3/2 for sufficiently large N. The latter feature is expected from continuum Langevin formulations appropriate for large sizes. Finally, we compare predictions from our model incorporating appropriate energetic parameters for Ag(100) with different sets of experimental data for diffusivity at 300 K, including assessment of β eff, for experimentally observed sizes N from ~100 to ~1000.« less
A dynamic experimental study on the evaporative cooling performance of porous building materials
NASA Astrophysics Data System (ADS)
Zhang, Yu; Zhang, Lei; Meng, Qinglin; Feng, Yanshan; Chen, Yuanrui
2017-08-01
Conventional outdoor dynamic and indoor steady-state experiments have certain limitations in regard to investigating the evaporative cooling performance of porous building materials. The present study investigated the evaporative cooling performance of a porous building material using a special wind tunnel apparatus. First, the composition and control principles of the wind tunnel environment control system were elucidated. Then, the meteorological environment on a typical summer day in Guangzhou was reproduced in the wind tunnel and the evaporation process and thermal parameters of specimens composed of a porous building material were continuously measured. Finally, the experimental results were analysed to evaluate the accuracy of the wind tunnel environment control system, the heat budget of the external surface of the specimens and the total thermal resistance of the specimens and its uncertainty. The analysis results indicated that the normalized root-mean-square error between the measured value of each environmental parameter in the wind tunnel test section and the corresponding value input into the environment control system was <4%, indicating that the wind tunnel apparatus had relatively high accuracy in reproducing outdoor meteorological environments. In addition, the wet specimen could cumulatively consume approximately 80% of the shortwave radiation heat during the day, thereby reducing the temperature of the external surface and the heat flow on the internal surface of the specimen. Compared to the dry specimen, the total thermal resistance of the wet specimen was approximately doubled, indicating that the evaporation process of the porous building material could significantly improve the thermal insulation performance of the specimen.
Lai, King C.; Liu, Da-Jiang; Thiel, Patricia A.; ...
2018-02-22
Diffusion coefficients, D N, for 2D vacancy nanopits are compared with those for 2D homoepitaxial adatom nanoislands on metal(100) surfaces, focusing on the variation of DN with size, N. Here, N is measured in missing atoms for pits and adatoms for islands. Analysis of D N is based on kinetic Monte Carlo simulations of a tailored stochastic lattice-gas model, where pit and island diffusion are mediated by periphery diffusion, i.e., by edge atom hopping. Precise determination of D N versus N for typical parameters reveals a cyclical variation with an overall decrease in magnitude for increasing moderate O(10 2) ≤more » N ≤ O(10 3). Monotonic decay, D N~ N -β, is found for N ≥ O(10 2) with effective exponents, β = β eff, for both pits and islands, both well below the macroscopic value of βmacro = 3/2. D N values for vacancy pits are significantly lower (higher) than for adatom islands for moderate N in the case of low (high) kink rounding barrier. However, D N values for pits and islands slowly merge, and β eff → 3/2 for sufficiently large N. The latter feature is expected from continuum Langevin formulations appropriate for large sizes. Finally, we compare predictions from our model incorporating appropriate energetic parameters for Ag(100) with different sets of experimental data for diffusivity at 300 K, including assessment of β eff, for experimentally observed sizes N from ~100 to ~1000.« less
Huang, Yu; Guo, Feng; Li, Yongling; Liu, Yufeng
2015-01-01
Parameter estimation for fractional-order chaotic systems is an important issue in fractional-order chaotic control and synchronization and could be essentially formulated as a multidimensional optimization problem. A novel algorithm called quantum parallel particle swarm optimization (QPPSO) is proposed to solve the parameter estimation for fractional-order chaotic systems. The parallel characteristic of quantum computing is used in QPPSO. This characteristic increases the calculation of each generation exponentially. The behavior of particles in quantum space is restrained by the quantum evolution equation, which consists of the current rotation angle, individual optimal quantum rotation angle, and global optimal quantum rotation angle. Numerical simulation based on several typical fractional-order systems and comparisons with some typical existing algorithms show the effectiveness and efficiency of the proposed algorithm. PMID:25603158
Li, Linglong; Yang, Yaodong; Zhang, Dawei; ...
2018-03-30
Exploration of phase transitions and construction of associated phase diagrams are of fundamental importance for condensed matter physics and materials science alike, and remain the focus of extensive research for both theoretical and experimental studies. For the latter, comprehensive studies involving scattering, thermodynamics, and modeling are typically required. We present a new approach to data mining multiple realizations of collective dynamics, measured through piezoelectric relaxation studies, to identify the onset of a structural phase transition in nanometer-scale volumes, that is, the probed volume of an atomic force microscope tip. Machine learning is used to analyze the multidimensional data sets describingmore » relaxation to voltage and thermal stimuli, producing the temperature-bias phase diagram for a relaxor crystal without the need to measure (or know) the order parameter. The suitability of the approach to determine the phase diagram is shown with simulations based on a two-dimensional Ising model. Finally, these results indicate that machine learning approaches can be used to determine phase transitions in ferroelectrics, providing a general, statistically significant, and robust approach toward determining the presence of critical regimes and phase boundaries.« less
On-line Bayesian model updating for structural health monitoring
NASA Astrophysics Data System (ADS)
Rocchetta, Roberto; Broggi, Matteo; Huchet, Quentin; Patelli, Edoardo
2018-03-01
Fatigue induced cracks is a dangerous failure mechanism which affects mechanical components subject to alternating load cycles. System health monitoring should be adopted to identify cracks which can jeopardise the structure. Real-time damage detection may fail in the identification of the cracks due to different sources of uncertainty which have been poorly assessed or even fully neglected. In this paper, a novel efficient and robust procedure is used for the detection of cracks locations and lengths in mechanical components. A Bayesian model updating framework is employed, which allows accounting for relevant sources of uncertainty. The idea underpinning the approach is to identify the most probable crack consistent with the experimental measurements. To tackle the computational cost of the Bayesian approach an emulator is adopted for replacing the computationally costly Finite Element model. To improve the overall robustness of the procedure, different numerical likelihoods, measurement noises and imprecision in the value of model parameters are analysed and their effects quantified. The accuracy of the stochastic updating and the efficiency of the numerical procedure are discussed. An experimental aluminium frame and on a numerical model of a typical car suspension arm are used to demonstrate the applicability of the approach.
Protein Denaturation on p-T Axes--Thermodynamics and Analysis.
Smeller, László
2015-01-01
Proteins are essential players in the vast majority of molecular level life processes. Since their structure is in most cases substantial for their correct function, study of their structural changes attracted great interest in the past decades. The three dimensional structure of proteins is influenced by several factors including temperature, pH, presence of chaotropic and cosmotropic agents, or presence of denaturants. Although pressure is an equally important thermodynamic parameter as temperature, pressure studies are considerably less frequent in the literature, probably due to the technical difficulties associated to the pressure studies. Although the first steps in the high-pressure protein study have been done 100 years ago with Bridgman's ground breaking work, the field was silent until the modern spectroscopic techniques allowed the characterization of the protein structural changes, while the protein was under pressure. Recently a number of proteins were studied under pressure, and complete pressure-temperature phase diagrams were determined for several of them. This review summarizes the thermodynamic background of the typical elliptic p-T phase diagram, its limitations and the possible reasons for deviations of the experimental diagrams from the theoretical one. Finally we show some examples of experimentally determined pressure-temperature phase diagrams.
2014-01-01
Background Support vector regression (SVR) and Gaussian process regression (GPR) were used for the analysis of electroanalytical experimental data to estimate diffusion coefficients. Results For simulated cyclic voltammograms based on the EC, Eqr, and EqrC mechanisms these regression algorithms in combination with nonlinear kernel/covariance functions yielded diffusion coefficients with higher accuracy as compared to the standard approach of calculating diffusion coefficients relying on the Nicholson-Shain equation. The level of accuracy achieved by SVR and GPR is virtually independent of the rate constants governing the respective reaction steps. Further, the reduction of high-dimensional voltammetric signals by manual selection of typical voltammetric peak features decreased the performance of both regression algorithms compared to a reduction by downsampling or principal component analysis. After training on simulated data sets, diffusion coefficients were estimated by the regression algorithms for experimental data comprising voltammetric signals for three organometallic complexes. Conclusions Estimated diffusion coefficients closely matched the values determined by the parameter fitting method, but reduced the required computational time considerably for one of the reaction mechanisms. The automated processing of voltammograms according to the regression algorithms yields better results than the conventional analysis of peak-related data. PMID:24987463
Modeling interfacial area transport in multi-fluid systems
DOE Office of Scientific and Technical Information (OSTI.GOV)
Yarbro, Stephen Lee
1996-11-01
Many typical chemical engineering operations are multi-fluid systems. They are carried out in distillation columns (vapor/liquid), liquid-liquid contactors (liquid/liquid) and other similar devices. An important parameter is interfacial area concentration, which determines the rate of interfluid heat, mass and momentum transfer and ultimately, the overall performance of the equipment. In many cases, the models for determining interfacial area concentration are empirical and can only describe the cases for which there is experimental data. In an effort to understand multiphase reactors and the mixing process better, a multi-fluid model has been developed as part of a research effort to calculate interfacialmore » area transport in several different types of in-line static mixers. For this work, the ensemble-averaged property conservation equations have been derived for each fluid and for the mixture. These equations were then combined to derive a transport equation for the interfacial area concentration. The final, one-dimensional model was compared to interfacial area concentration data from two sizes of Kenics in-line mixer, two sizes of concurrent jet and a Tee mixer. In all cases, the calculated and experimental data compared well with the highest scatter being with the Tee mixer comparison.« less
Phase retrieval with tunable phase transfer function based on the transport of intensity equation
NASA Astrophysics Data System (ADS)
Martinez-Carranza, J.; Stepien, P.; Kozacki, T.
2017-06-01
Recovering phase information with Deterministic approaches as the Transport of Intensity Equation (TIE) has recently emerged as an alternative tool to the interferometric techniques because it is experimentally easy to implement and provides fast and accurate results. Moreover, the potential of employing partially coherent illumination (PCI) in such techniques allow obtaining high quality phase reconstructions providing that the estimation of the corresponding Phase Transfer Function (PTF) is carried out correctly. Hence, accurate estimation of the PTF requires that the physical properties of the optical system are well known. Typically, these parameters are assumed constant in all the set of measurements, which might not be optimal. In this work, we proposed the use of an amplitude Spatial Light Modulator (aSLM) for tuning the degree of coherence of the optical system. The aSLM will be placed at the Fourier plane of the optical system, and then, band pass filters will be displayed. This methodology will perform amplitude modulation of the propagated field and as a result, the state of coherence of the optical system can be modified. Theoretical and experimental results that validate our proposed technique will be shown.
Prasolova, L A; Trut, L N; Os'kina, I N; Gulevich, R G; Pliusnina, I Z; Vsevolodov, E B; Latypov, I F
2006-01-01
The effect of methyl supplements to the diet of pregnant homozygous (AAHH) female rats with agouti coat color mated with homozygous (aahh) males on the phenotypic modification of the coat color of their heterozygous offspring (AaHh) has been studied. Comparative morphological analysis of the main parameters of hair that determine coat color, including the total length of hairs of different types and the length of the upper black (eumelanin) and light (pheomelanin) parts of awn hairs has been performed. The pattern of pigment granule distribution among hair layers has been analyzed. The melanin content of the hair has been determined using electron spin resonance (ESR). Although all offspring have a typical agouti coat color (alternating black and light portions of hair), 39% of them have a darker coat color than control and other experimental rats have. The main differences between the offspring with darkened and standard coat colors are accounted for by the ratio between the eumelanin and pheomelanin portions of awn hairs. In darkened offspring, this ratio is significantly higher than in control rats. The possible mechanisms of the phenotypic modification of agouti coat color in experimental animals are discussed.
Preventive strength training improves working ergonomics during welding.
Krüger, Karsten; Petermann, Carmen; Pilat, Christian; Schubert, Emil; Pons-Kühnemann, Jörn; Mooren, Frank C
2015-01-01
To investigate the effect of a preventive strength training program on cardiovascular, metabolic and muscular strains during welding. Welders are one of the occupation groups which typically have to work in extended forced postures which are known to be an important reason for musculoskeletal disorders. Subjects (exercise group) accomplished a 12-week strength training program, while another group served as controls (control group). Pre and post training examinations included the measurements of the one repetition maximum and an experimental welding test. Local muscle activities were analysed by surface electromyography. Furthermore, heart rate, blood pressure, lactate and rating of perceived exertion were examined. In the exercise group, strength training lead to a significant increase of one repetition maximum in all examined muscles (p<.05). During the experimental welding test muscle activities of trunk and shoulder muscles and arm muscles were significantly reduced in the exercise group after intervention (p<.05). While no changes of neither cardiovascular nor metabolic parameters were found, subjects of the exercise group rated a significantly decreased rate of perceived exertion welding (p<.05). Effects of strength training can be translated in an improved working ergonomics and tolerance against the exposure to high physical demands at work.
NASA Astrophysics Data System (ADS)
Doerr, Stefan; Santin, Cristina; Reardon, James; Mataix-Solera, Jorge; Stoof, Cathelijne; Bryant, Rob; Miesel, Jessica; Badia, David
2017-04-01
Heat transfer from the combustion of ground fuels and soil organic matter during vegetation fires can cause substantial changes to the physical, chemical and biological characteristics of soils. Numerous studies have investigated the effects of wildfires and prescribed burns on soil properties based either on field samples or using laboratory experiments. Critical thresholds for changes in soil properties, however, have been determined largely based on laboratory heating experimentation. These experimental approaches have been criticized for being inadequate for reflecting the actual heating patterns soil experienced in vegetation fires, which remain poorly understood. To address this research gap, this study reviews existing and evaluates new field data on key soil heating parameters determined during wildfires and prescribed burns from a wide range of environments. The results highlight the high spatial and temporal variability in soil heating patters not only between, but also within fires. Most wildfires and prescribed burns are associated with heat pulses that are much shorter than those typically applied in laboratory studies, which can lead to erroneous conclusions when results from laboratory studies are used to predict fire impacts on soils in the field.
Permutation inference for the general linear model
Winkler, Anderson M.; Ridgway, Gerard R.; Webster, Matthew A.; Smith, Stephen M.; Nichols, Thomas E.
2014-01-01
Permutation methods can provide exact control of false positives and allow the use of non-standard statistics, making only weak assumptions about the data. With the availability of fast and inexpensive computing, their main limitation would be some lack of flexibility to work with arbitrary experimental designs. In this paper we report on results on approximate permutation methods that are more flexible with respect to the experimental design and nuisance variables, and conduct detailed simulations to identify the best method for settings that are typical for imaging research scenarios. We present a generic framework for permutation inference for complex general linear models (glms) when the errors are exchangeable and/or have a symmetric distribution, and show that, even in the presence of nuisance effects, these permutation inferences are powerful while providing excellent control of false positives in a wide range of common and relevant imaging research scenarios. We also demonstrate how the inference on glm parameters, originally intended for independent data, can be used in certain special but useful cases in which independence is violated. Detailed examples of common neuroimaging applications are provided, as well as a complete algorithm – the “randomise” algorithm – for permutation inference with the glm. PMID:24530839
A Statistical Physics Perspective to Understand Social Visual Attention in Autism Spectrum Disorder.
Liberati, Alessio; Fadda, Roberta; Doneddu, Giuseppe; Congiu, Sara; Javarone, Marco A; Striano, Tricia; Chessa, Alessandro
2017-08-01
This study investigated social visual attention in children with Autism Spectrum Disorder (ASD) and with typical development (TD) in the light of Brockmann and Geisel's model of visual attention. The probability distribution of gaze movements and clustering of gaze points, registered with eye-tracking technology, was studied during a free visual exploration of a gaze stimulus. A data-driven analysis of the distribution of eye movements was chosen to overcome any possible methodological problems related to the subjective expectations of the experimenters about the informative contents of the image in addition to a computational model to simulate group differences. Analysis of the eye-tracking data indicated that the scanpaths of children with TD and ASD were characterized by eye movements geometrically equivalent to Lévy flights. Children with ASD showed a higher frequency of long saccadic amplitudes compared with controls. A clustering analysis revealed a greater dispersion of eye movements for these children. Modeling of the results indicated higher values of the model parameter modulating the dispersion of eye movements for children with ASD. Together, the experimental results and the model point to a greater dispersion of gaze points in ASD.
Computer Simulation of Fracture in Aerogels
NASA Technical Reports Server (NTRS)
Good, Brian S.
2006-01-01
Aerogels are of interest to the aerospace community primarily for their thermal properties, notably their low thermal conductivities. While the gels are typically fragile, recent advances in the application of conformal polymer layers to these gels has made them potentially useful as lightweight structural materials as well. In this work, we investigate the strength and fracture behavior of silica aerogels using a molecular statics-based computer simulation technique. The gels' structure is simulated via a Diffusion Limited Cluster Aggregation (DLCA) algorithm, which produces fractal structures representing experimentally observed aggregates of so-called secondary particles, themselves composed of amorphous silica primary particles an order of magnitude smaller. We have performed multi-length-scale simulations of fracture in silica aerogels, in which the interaction b e e n two secondary particles is assumed to be described by a Morse pair potential parameterized such that the potential range is much smaller than the secondary particle size. These Morse parameters are obtained by atomistic simulation of models of the experimentally-observed amorphous silica "bridges," with the fracture behavior of these bridges modeled via molecular statics using a Morse/Coulomb potential for silica. We consider the energetics of the fracture, and compare qualitative features of low-and high-density gel fracture.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Li, Linglong; Yang, Yaodong; Zhang, Dawei
Exploration of phase transitions and construction of associated phase diagrams are of fundamental importance for condensed matter physics and materials science alike, and remain the focus of extensive research for both theoretical and experimental studies. For the latter, comprehensive studies involving scattering, thermodynamics, and modeling are typically required. We present a new approach to data mining multiple realizations of collective dynamics, measured through piezoelectric relaxation studies, to identify the onset of a structural phase transition in nanometer-scale volumes, that is, the probed volume of an atomic force microscope tip. Machine learning is used to analyze the multidimensional data sets describingmore » relaxation to voltage and thermal stimuli, producing the temperature-bias phase diagram for a relaxor crystal without the need to measure (or know) the order parameter. The suitability of the approach to determine the phase diagram is shown with simulations based on a two-dimensional Ising model. Finally, these results indicate that machine learning approaches can be used to determine phase transitions in ferroelectrics, providing a general, statistically significant, and robust approach toward determining the presence of critical regimes and phase boundaries.« less
High resolution through-the-wall radar image based on beamspace eigenstructure subspace methods
NASA Astrophysics Data System (ADS)
Yoon, Yeo-Sun; Amin, Moeness G.
2008-04-01
Through-the-wall imaging (TWI) is a challenging problem, even if the wall parameters and characteristics are known to the system operator. Proper target classification and correct imaging interpretation require the application of high resolution techniques using limited array size. In inverse synthetic aperture radar (ISAR), signal subspace methods such as Multiple Signal Classification (MUSIC) are used to obtain high resolution imaging. In this paper, we adopt signal subspace methods and apply them to the 2-D spectrum obtained from the delay-andsum beamforming image. This is in contrast to ISAR, where raw data, in frequency and angle, is directly used to form the estimate of the covariance matrix and array response vector. Using beams rather than raw data has two main advantages, namely, it improves the signal-to-noise ratio (SNR) and can correctly image typical indoor extended targets, such as tables and cabinets, as well as point targets. The paper presents both simulated and experimental results using synthesized and real data. It compares the performance of beam-space MUSIC and Capon beamformer. The experimental data is collected at the test facility in the Radar Imaging Laboratory, Villanova University.
Quantum simulation of the integer factorization problem: Bell states in a Penning trap
NASA Astrophysics Data System (ADS)
Rosales, Jose Luis; Martin, Vicente
2018-03-01
The arithmetic problem of factoring an integer N can be translated into the physics of a quantum device, a result that supports Pólya's and Hilbert's conjecture to demonstrate Riemann's hypothesis. The energies of this system, being univocally related to the factors of N , are the eigenvalues of a bounded Hamiltonian. Here we solve the quantum conditions and show that the histogram of the discrete energies, provided by the spectrum of the system, should be interpreted in number theory as the relative probability for a prime to be a factor candidate of N . This is equivalent to a quantum sieve that is shown to require only o (ln√{N}) 3 energy measurements to solve the problem, recovering Shor's complexity result. Hence the outcome can be seen as a probability map that a pair of primes solve the given factorization problem. Furthermore, we show that a possible embodiment of this quantum simulator corresponds to two entangled particles in a Penning trap. The possibility to build the simulator experimentally is studied in detail. The results show that factoring numbers, many orders of magnitude larger than those computed with experimentally available quantum computers, is achievable using typical parameters in Penning traps.
Electronic Polarizability and the Effective Pair Potentials of Water
Leontyev, I. V.; Stuchebrukhov, A. A.
2014-01-01
Employing the continuum dielectric model for electronic polarizability, we have developed a new consistent procedure for parameterization of the effective nonpolarizable potential of liquid water. The model explains the striking difference between the value of water dipole moment μ~3D reported in recent ab initio and experimental studies with the value μeff~2.3D typically used in the empirical potentials, such as TIP3P or SPC/E. It is shown that the consistency of the parameterization scheme can be achieved if the magnitude of the effective dipole of water is understood as a scaled value μeff=μ∕εel, where εel =1.78 is the electronic (high-frequency) dielectric constant of water, and a new electronic polarization energy term, missing in the previous theories, is included. The new term is evaluated by using Kirkwood - Onsager theory. The new scheme is fully consistent with experimental data on enthalpy of vaporization, density, diffusion coefficient, and static dielectric constant. The new theoretical framework provides important insights into the nature of the effective parameters, which is crucial when the computational models of liquid water are used for simulations in different environments, such as proteins, or for interaction with solutes. PMID:25383062
An investigation of conducted and radiated emissions from a hollow-cathode plasma contactor
NASA Astrophysics Data System (ADS)
Buchholtz, Brett W.; Wilbur, Paul J.
1993-07-01
An investigation conducted on the electrical interference induced by the operation of a hollow-cathode plasma contractor in a ground-based facility is described. The types of electrical interference, or noise, which are important to Space Station Freedom designers are classified as either conducted or radiated emissions. The procedures required to perform conducted and radiated emission measurements on a plasma contactor are examined. The experimental data obtained are typically examined in the frequency domain (i.e. amplitudes of the noise fluctuations versus frequency). Results presented indicate the conducted emissions, which are the current fluctuations from the contactor into the space station wiring, are affected by operating parameters such as expellant flow rate and discharge current. The radiated emissions, which are the electromagnetic waves induced and emitted by the contactor, appear to be influenced by the contactor emission current. Other experimental results suggest possible sources which are responsible for the observed noise. For example, the influence of the plasma environment downstream from the contactor on noise emission levels is described. In addition, a brief discussion is given on the correlation between conducted and radiated emissions and the mechanisms through which both are influenced by the plasma downstream of the contactor.
An investigation of conducted and radiated emissions from a hollow-cathode plasma contactor
NASA Technical Reports Server (NTRS)
Buchholtz, Brett W.; Wilbur, Paul J.
1993-01-01
An investigation conducted on the electrical interference induced by the operation of a hollow-cathode plasma contractor in a ground-based facility is described. The types of electrical interference, or noise, which are important to Space Station Freedom designers are classified as either conducted or radiated emissions. The procedures required to perform conducted and radiated emission measurements on a plasma contactor are examined. The experimental data obtained are typically examined in the frequency domain (i.e. amplitudes of the noise fluctuations versus frequency). Results presented indicate the conducted emissions, which are the current fluctuations from the contactor into the space station wiring, are affected by operating parameters such as expellant flow rate and discharge current. The radiated emissions, which are the electromagnetic waves induced and emitted by the contactor, appear to be influenced by the contactor emission current. Other experimental results suggest possible sources which are responsible for the observed noise. For example, the influence of the plasma environment downstream from the contactor on noise emission levels is described. In addition, a brief discussion is given on the correlation between conducted and radiated emissions and the mechanisms through which both are influenced by the plasma downstream of the contactor.