Two new species of the genus Arrenurus from Pohnpei, Federated States of Micronesia (Acari: Hydrchnidia: Arrenuridae)

Treesearch

Harry Smit

2010-01-01

Few specimens of water mites have been collected from Pacific Island streams, especially higher elevation, head water streams. Uchida (1935, 1939) and Cook & Bright (1983) published 11 species of water mites from the Palau Islands, while Cook (1957) reported two Arrenurus species from the main island of Yap in the Caroline Island chain. Viets (...

Living in the tide of change: explaining Japanese subjective health from the socio-demographic change

PubMed Central

Hitokoto, Hidefumi; Tanaka-Matsumi, Junko

2014-01-01

Today, countries around the world are caught in the tide of change toward Gesellshaft, or individualistic socio-demographic condition. Recent investigations in Japan have suggested negative impacts of change on emotional and motivational aspects of the Japanese self (Norasakkunkit et al., 2012; Ogihara and Uchida, 2014). Building on previous findings, in Study 1, we measured socio-demographic change toward individualistic societal condition during 1990–2010—two decades marked by great economic recession—at the levels of prefecture and city using archival data. In Study 2, we tested whether Japanese adults' general health, satisfaction with life, self-esteem, and perceived social support were negatively predicted by the change using social survey. Results of hierarchical linear modeling showed small but unique negative effects of the change on several health measures, suggesting that this change had an impact on health, above and beyond individual personality traits, and demographics. Additionally, interdependent happiness, the type of cultural happiness grounded in interdependence of the self (Hitokoto and Uchida, 2014), showed an independent positive relationship with all aspects of health examined. Implications for health studies in changing socio-demographic condition are discussed in the context of Japanese society after economic crisis. PMID:25400604

New species of Rhorus Förster, 1869 (Hymenoptera: Ichneumonidae: Ctenopelmatinae) from South Korea.

PubMed

Kasparyan, D R; Choi, Jin-Kyung; Lee, Jong-Wook

2016-08-31

A new ichneumonid-species Rhorus koreensis sp. nov. is described from South Korea. Monoblastus jinjuensis Lee et Cha, 1993 described from South Korea is transferred to Rhorus (new combination). Only Rh. takagii (Uchida, 1931) is recorded previously from South Korea. Rhorus nigritarsis (Hedwig, 1956) is recorded for the first time from South Korea. A key to the four South Korean species are provided.

Capsule Depolymerase Overexpression Reduces Bacillus anthracis Virulence

DTIC Science & Technology

2010-01-01

protein that autocatalytically forms a heterodimer consisting of 35 kDa and 15 kDa subunits. CapD shares 32 % identity with the Bacillus subtilis GGT and 35...Immun 49, 291–297. Kimura, K., Tran, L. S., Uchida, I. & Itoh, Y. (2004). Characterization of Bacillus subtilis gamma-glutamyltransferase and its...Capsule depolymerase overexpression reduces Bacillus anthracis virulence Angelo Scorpio,3 Donald J. Chabot, William A. Day,4 Timothy A. Hoover and

Environmental and management influences on temporal variability of near saturated soil hydraulic properties.

PubMed

Bodner, G; Scholl, P; Loiskandl, W; Kaul, H-P

2013-08-01

Structural porosity is a decisive property for soil productivity and soil environmental functions. Hydraulic properties in the structural range vary over time in response to management and environmental influences. Although this is widely recognized, there are few field studies that determine dominant driving forces underlying hydraulic property dynamics. During a three year field experiment we measured temporal variability of soil hydraulic properties by tension infiltrometry. Soil properties were characterized by hydraulic conductivity, effective macroporosity and Kosugi's lognormal pore size distribution model. Management related influences comprised three soil cover treatment (mustard and rye vs. fallow) and an initial mechanical soil disturbance with a rotary harrow. Environmental driving forces were derived from meteorological and soil moisture data. Soil hydraulic parameters varied over time by around one order of magnitude. The coefficient of variation of soil hydraulic conductivity K(h) decreased from 69.5% at saturation to 42.1% in the more unsaturated range (- 10 cm pressure head). A slight increase in the Kosugi parameter showing pore heterogeneity was observed under the rye cover crop, reflecting an enhanced structural porosity. The other hydraulic parameters were not significantly influenced by the soil cover treatments. Seedbed preparation with a rotary harrow resulted in a fourfold increase in macroporosity and hydraulic conductivity next to saturation, and homogenized the pore radius distribution. Re-consolidation after mechanical loosening lasted over 18 months until the soil returned to its initial state. The post-tillage trend of soil settlement could be approximated by an exponential decay function. Among environmental factors, wetting-drying cycles were identified as dominant driving force explaining short term hydraulic property changes within the season (r 2  = 0.43 to 0.59). Our results suggested that beside considering average management induced changes in soil properties (e.g. cover crop introduction), a dynamic approach to hydrological modeling is required to capture over-seasonal (tillage driven) and short term (environmental driven) variability in hydraulic parameters.

Environmental and management influences on temporal variability of near saturated soil hydraulic properties☆

PubMed Central

Bodner, G.; Scholl, P.; Loiskandl, W.; Kaul, H.-P.

2013-01-01

Structural porosity is a decisive property for soil productivity and soil environmental functions. Hydraulic properties in the structural range vary over time in response to management and environmental influences. Although this is widely recognized, there are few field studies that determine dominant driving forces underlying hydraulic property dynamics. During a three year field experiment we measured temporal variability of soil hydraulic properties by tension infiltrometry. Soil properties were characterized by hydraulic conductivity, effective macroporosity and Kosugi's lognormal pore size distribution model. Management related influences comprised three soil cover treatment (mustard and rye vs. fallow) and an initial mechanical soil disturbance with a rotary harrow. Environmental driving forces were derived from meteorological and soil moisture data. Soil hydraulic parameters varied over time by around one order of magnitude. The coefficient of variation of soil hydraulic conductivity K(h) decreased from 69.5% at saturation to 42.1% in the more unsaturated range (− 10 cm pressure head). A slight increase in the Kosugi parameter showing pore heterogeneity was observed under the rye cover crop, reflecting an enhanced structural porosity. The other hydraulic parameters were not significantly influenced by the soil cover treatments. Seedbed preparation with a rotary harrow resulted in a fourfold increase in macroporosity and hydraulic conductivity next to saturation, and homogenized the pore radius distribution. Re-consolidation after mechanical loosening lasted over 18 months until the soil returned to its initial state. The post-tillage trend of soil settlement could be approximated by an exponential decay function. Among environmental factors, wetting-drying cycles were identified as dominant driving force explaining short term hydraulic property changes within the season (r2 = 0.43 to 0.59). Our results suggested that beside considering average management induced changes in soil properties (e.g. cover crop introduction), a dynamic approach to hydrological modeling is required to capture over-seasonal (tillage driven) and short term (environmental driven) variability in hydraulic parameters. PMID:24748683

Soil Water Characteristics of Cores from Low- and High-Centered Polygons, Barrow, Alaska, 2012

DOE Data Explorer

Graham, David; Moon, Ji-Won

2016-08-22

This dataset includes soil water characteristic curves for soil and permafrost in two representative frozen cores collected from a high-center polygon (HCP) and a low-center polygon (LCP) from the Barrow Environmental Observatory. Data include soil water content and soil water potential measured using the simple evaporation method for hydrological and biogeochemical simulations and experimental data analysis. Data can be used to generate a soil moisture characteristic curve, which can be fit to a variety of hydrological functions to infer critical parameters for soil physics. Considering the measured the soil water properties, the van Genuchten model predicted well the HCP, in contrast, the Kosugi model well fitted LCP which had more saturated condition.

A post-Tohoku earthquake review of earthquake probabilities in the Southern Kanto District, Japan

NASA Astrophysics Data System (ADS)

Somerville, Paul G.

2014-12-01

The 2011 Mw 9.0 Tohoku earthquake generated an aftershock sequence that affected a large part of northern Honshu, and has given rise to widely divergent forecasts of changes in earthquake occurrence probabilities in northern Honshu. The objective of this review is to assess these forecasts as they relate to potential changes in the occurrence probabilities of damaging earthquakes in the Kanto Region. It is generally agreed that the 2011 Mw 9.0 Tohoku earthquake increased the stress on faults in the southern Kanto district. Toda and Stein (Geophys Res Lett 686, 40: doi:10.1002, 2013) further conclude that the probability of earthquakes in the Kanto Corridor has increased by a factor of 2.5 for the time period 11 March 2013 to 10 March 2018 in the Kanto Corridor. Estimates of earthquake probabilities in a wider region of the Southern Kanto District by Nanjo et al. (Geophys J Int, doi:10.1093, 2013) indicate that any increase in the probability of earthquakes is insignificant in this larger region. Uchida et al. (Earth Planet Sci Lett 374: 81-91, 2013) conclude that the Philippine Sea plate the extends well north of the northern margin of Tokyo Bay, inconsistent with the Kanto Fragment hypothesis of Toda et al. (Nat Geosci, 1:1-6,2008), which attributes deep earthquakes in this region, which they term the Kanto Corridor, to a broken fragment of the Pacific plate. The results of Uchida and Matsuzawa (J Geophys Res 115:B07309, 2013)support the conclusion that fault creep in southern Kanto may be slowly relaxing the stress increase caused by the Tohoku earthquake without causing more large earthquakes. Stress transfer calculations indicate a large stress transfer to the Off Boso Segment as a result of the 2011 Tohoku earthquake. However, Ozawa et al. (J Geophys Res 117:B07404, 2012) used onshore GPS measurements to infer large post-Tohoku creep on the plate interface in the Off-Boso region, and Uchida and Matsuzawa (ibid.) measured similar large creep off the Boso Peninsula. Thus some of the large stress transfer may be undergoing aseismic release, consistent with pre-Tohoku geodetic data, so a large earthquake on the Off Boso segment may have a low probability.

An In Vitro Skin Equivalent for Evaluation of Skin Absorption of Compounds

DTIC Science & Technology

2008-12-01

1023-1033. Uchida, Y., M. Behne, D. Quiec, P. M. Elias, and W. M. Holleran, 2001: Vitamin C Stimulates Sphingolipid Production and Markers of...dermal fibroblasts and human keratinocytes, and conditions such as addition of ascorbic acid are being used to look at effects on morphogenesis...and Epiderm FT ® (Full thickness SE) (MatTek Corporation, Ashland MA, USA) (Bernard, F.- X., Barrault, C . et al. 2000;Boelsma, E., Gibbs, S. et al

Roles of the eye care workforce for task sharing in management of diabetic retinopathy in Cambodia

PubMed Central

Shah, Mufarriq; Ormsby, Gail M.; Noor, Ayesha; Chakrabarti, Rahul; Mörchen, Manfred; Islam, Fakir M Amirul; Harper, C Alex; Keeffe, Jill E

2018-01-01

AIM To identify the current roles of eye and health care workers in eye care delivery and investigate their potential roles in screening and detection for management of diabetic retinopathy (DR) through task sharing. METHODS Purposive sampling of 24 participants including health administrators, members from non-government organizations and all available eye care workers in Takeo province were recruited. This cross sectional mixed method study comprised a survey and in-depth interviews. Data were collected from medical records at Caritas Takeo Eye Hospital (CTEH) and Kiri Vong District Referral Hospital Vision Centre, and a survey and interviews with participants were done to explore the potential roles for task sharing in DR management. Qualitative data were transcribed into a text program and then entered into N-Vivo (version 10) software for data management and analysis. RESULTS From 2009 to 2012, a total of 105 178 patients were examined and 14 030 eye surgeries were performed in CTEH by three ophthalmologists supported by ophthalmic nurses in operating and eye examination for patients. Between January 2011 and September 2012, 151 patients (72 males) with retinal pathology including 125 (83%) with DR visited CTEH. In addition 170 patients with diabetes were referred to CTEH for eye examinations from Mo Po Tsyo screening programs for people with diabetes. Factors favouring task sharing included high demand for eye care services and scarcity of ophthalmologists. CONCLUSION Task sharing and team work for eye care services is functional. Participants favor the potential role of ophthalmic nurses in screening for DR through task sharing. PMID:29375999

Two new species of genus Ateleute Förster (Hymenoptera, Ichneumonidae, Cryptinae) with a key to the Oriental species

PubMed Central

Sheng, Mao-Ling; Broad, Gavin R.; Sun, Shu-Ping

2011-01-01

Abstract Three species of Ateleute Förster 1869 belonging to the tribe Cryptini of the subfamily Cryptinae (Hymenoptera, Ichneumonidae), collected from Jiangxi Province, China, are reported, of which two are new for science: Ateleute ferruginea Sheng, Broad & Sun, sp. n. and AAteleute zixiensis Sheng, Broad & Sun, sp. n. One, AAteleute densistriata (Uchida, 1955), was previously known from China and Japan. A key to the species of genus Ateleute known in the Oriental Region is provided. PMID:22287879

Compilation of NRL Publications on High Temperature Superconductivity.

DTIC Science & Technology

1987-01-01

Fig. 2. The upper critical field as a function of .R. Beasley: Phys. Rev 11(1979) 4545. temperature for Ial.8Sro.2Cu04 (left) and 10) A. Junod , A...commuication 10) T.P. Orlando. E.J. McNiff. Jr.. S. Foner. and M.R. Beasley: Fhys. Rev 9(1979) 4545.-,, 11) A. Junod . A. Bezinge. T. Graf. J.L. Jorda. J...of MRS meeting (Anaheim, i Uchida et al. Jpn. J. of Apph Phys. 26, L443 (1987). -s 1987; in press). 12. H. Junod et al. (preprint

Evaluation of AUC(0-4) predictive methods for cyclosporine in kidney transplant patients.

PubMed

Aoyama, Takahiko; Matsumoto, Yoshiaki; Shimizu, Makiko; Fukuoka, Masamichi; Kimura, Toshimi; Kokubun, Hideya; Yoshida, Kazunari; Yago, Kazuo

2005-05-01

Cyclosporine (CyA) is the most commonly used immunosuppressive agent in patients who undergo kidney transplantation. Dosage adjustment of CyA is usually based on trough levels. Recently, trough levels have been replacing the area under the concentration-time curve during the first 4 h after CyA administration (AUC(0-4)). The aim of this study was to compare the predictive values obtained using three different methods of AUC(0-4) monitoring. AUC(0-4) was calculated from 0 to 4 h in early and stable renal transplant patients using the trapezoidal rule. The predicted AUC(0-4) was calculated using three different methods: the multiple regression equation reported by Uchida et al.; Bayesian estimation for modified population pharmacokinetic parameters reported by Yoshida et al.; and modified population pharmacokinetic parameters reported by Cremers et al. The predicted AUC(0-4) was assessed on the basis of predictive bias, precision, and correlation coefficient. The predicted AUC(0-4) values obtained using three methods through measurement of three blood samples showed small differences in predictive bias, precision, and correlation coefficient. In the prediction of AUC(0-4) measurement of one blood sample from stable renal transplant patients, the performance of the regression equation reported by Uchida depended on sampling time. On the other hand, the performance of Bayesian estimation with modified pharmacokinetic parameters reported by Yoshida through measurement of one blood sample, which is not dependent on sampling time, showed a small difference in the correlation coefficient. The prediction of AUC(0-4) using a regression equation required accurate sampling time. In this study, the prediction of AUC(0-4) using Bayesian estimation did not require accurate sampling time in the AUC(0-4) monitoring of CyA. Thus Bayesian estimation is assumed to be clinically useful in the dosage adjustment of CyA.

Drug Transporter Protein Quantification of Immortalized Human Lung Cell Lines Derived from Tracheobronchial Epithelial Cells (Calu-3 and BEAS2-B), Bronchiolar-Alveolar Cells (NCI-H292 and NCI-H441), and Alveolar Type II-like Cells (A549) by Liquid Chromatography-Tandem Mass Spectrometry.

PubMed

Sakamoto, Atsushi; Matsumaru, Takehisa; Yamamura, Norio; Suzuki, Shinobu; Uchida, Yasuo; Tachikawa, Masanori; Terasaki, Tetsuya

2015-09-01

Understanding the mechanisms of drug transport in the human lung is an important issue in pulmonary drug discovery and development. For this purpose, there is an increasing interest in immortalized lung cell lines as alternatives to primary cultured lung cells. We recently reported the protein expression in human lung tissues and pulmonary epithelial cells in primary culture, (Sakamoto A, Matsumaru T, Yamamura N, Uchida Y, Tachikawa M, Ohtsuki S, Terasaki T. 2013. J Pharm Sci 102(9):3395-3406) whereas comprehensive quantification of protein expressions in immortalized lung cell lines is sparse. Therefore, the aim of the present study was to clarify the drug transporter protein expression of five commercially available immortalized lung cell lines derived from tracheobronchial cells (Calu-3 and BEAS2-B), bronchiolar-alveolar cells (NCI-H292 and NCI-H441), and alveolar type II cells (A549), by liquid chromatography-tandem mass spectrometry-based approaches. Among transporters detected, breast cancer-resistance protein in Calu-3, NCI-H292, NCI-H441, and A549 and OCTN2 in BEAS2-B showed the highest protein expression. Compared with data from our previous study,(Sakamoto A, Matsumaru T, Yamamura N, Uchida Y, Tachikawa M, Ohtsuki S, Terasaki T. 2013. J Pharm Sci 102(9):3395-3406) NCI-H441 was the most similar with primary lung cells from all regions in terms of protein expression of organic cation/carnitine transporter 1 (OCTN1). In conclusion, the protein expression profiles of transporters in five immortalized lung cell lines were determined, and these findings may contribute to a better understanding of drug transport in immortalized lung cell lines. © 2015 Wiley Periodicals, Inc. and the American Pharmacists Association.

Rapid assessment of injection practices in Cambodia, 2002

PubMed Central

Vong, Sirenda; Perz, Joseph F; Sok, Srun; Som, Seiharath; Goldstein, Susan; Hutin, Yvan; Tulloch, James

2005-01-01

Background Injection overuse and unsafe injection practices facilitate transmission of bloodborne pathogens such as hepatitis B virus (HBV), hepatitis C virus (HCV), and human immunodeficiency virus (HIV). Anecdotal reports of unsafe and unnecessary therapeutic injections and the high prevalence of HBV (8.0%), HCV (6.5%), and HIV (2.6%) infection in Cambodia have raised concern over injection safety. To estimate the magnitude and patterns of such practices, a rapid assessment of injection practices was conducted. Methods We surveyed a random sample of the general population in Takeo Province and convenience samples of prescribers and injection providers in Takeo Province and Phnom Penh city regarding injection-related knowledge, attitudes, and practices. Injection providers were observed administering injections. Data were collected using standardized methods adapted from the World Health Organization safe injection assessment guidelines. Results Among the general population sample (n = 500), the overall injection rate was 5.9 injections per person-year, with 40% of participants reporting receipt of ≥ 1 injection during the previous 6 months. Therapeutic injections, intravenous infusions, and immunizations accounted for 74%, 16% and 10% of injections, respectively. The majority (>85%) of injections were received in the private sector. All participants who recalled their last injection reported the injection was administered with a newly opened disposable syringe and needle. Prescribers (n = 60) reported that 47% of the total prescriptions they wrote included a therapeutic injection or infusion. Among injection providers (n = 60), 58% recapped the syringe after use and 13% did not dispose of the used needle and syringe appropriately. Over half (53%) of the providers reported a needlestick injury during the previous 12 months. Ninety percent of prescribers and injection providers were aware HBV, HCV, and HIV were transmitted through unsafe injection practices. Knowledge of HIV transmission through "dirty" syringes among the general population was also high (95%). Conclusion Our data suggest that Cambodia has one of the world's highest rates of overall injection usage, despite general awareness of associated infection risks. Although there was little evidence of reuse of needles and syringes, support is needed for interventions to address injection overuse, healthcare worker safety and appropriate waste disposal. PMID:15929800

Do the Infrared Emission Features Need UV Excitation? The PAH Model in UV-poor Reflection Nebulae

NASA Astrophysics Data System (ADS)

Li, A.; Draine, B. T.

2001-12-01

One of the major challenges of identifying the 3.3, 6.2, 7.7, 8.6, and 11.3μ m interstellar infrared emission bands with polycyclic aromatic hydrocarbon (PAH) molecules has been the recent detection of these bands in regions with little ultraviolet (UV) illumination since small, neutral PAH molecules have little or no absorption at visible wavelengths and thus are excited primarily by UV photons. The ``astronomical'' PAH model (Li & Draine 2001), incorporating the experimental result that the visual absorption edge shifts to longer wavelength upon ionization and/or as the PAH size increases (Allamandola, Hudgins, & Sandford 1999), is shown to be able to closely reproduce the observed infrared emission bands of vdB 133, a UV-poor reflection nebula (Uchida, Sellgren, & Werner 1998) as well as the 6.2, 7.7, and 11.3μ m band ratios of the UV-deficient ring in the Andromeda galaxy M31 (Pagani et al. 1999). It is also shown that ``astronomical'' PAHs can be heated sufficiently by a T eff=3000 K black-body to emit at 6.2, 7.7, 8.6, and 11.3μ m. Illustrative mid-IR emission spectra are calculated for reflection nebulae illuminated by cool stars with T eff=3600, 4500, 5000 K. These will allow comparison with future Space Infrared Telescope Facility (SIRTF) observations of vdB 135 (T eff=3600 K), vdB 47 (T eff=4500 K), and vdB 101 (T eff=5000 K) (Houck 2001). This research was supported in part by NASA grant NAG5-7030 and NSF grant AST-9619429. { References:} Allamandola, L.J., Hudgins, D.M., & Sandford, S.A. 1999, ApJ, 511, L115 Houck, J.R. 2001, SIRTF Observations of the Mid IR Features in Reflection Nebulae, {\\sf http://sirtf.caltech.edu/ROC/pid19} Li, A., & Draine, B.T. 2001, ApJ, 554, 778 Pagani, L., et al. 1999, A&A, 351, 447 Uchida, K.I., Sellgren, K., & Werner, M.W. 1998, ApJ, 493, L109

Super-PIRE: International Consortium for Proving Novel Superconducors

NASA Astrophysics Data System (ADS)

Uemura, Yasutomo

2012-02-01

The Super-PIRE project aims to study high-Tc cuprates, FeAs, heavy-ferimon and other unconventional superconductors by using neutron scattering, muon spin relaxation, X-ray scattering, optical conductivity, ARPES and STM measurements in international collaboration. The project includes US PI's Billinge, Pasupathy, Uemura (Columbia), amd Dai (UTK/ORNL), Project Patner (PP) Balatsky (LANL), and foreign PI's Uchida, Tajima, Maekawa, Eisaki (Japan), Hayden (UK), Wang (China), Luke (Canada), and about 40 additional ``Local Experts'' from institutions of the PI/PP's. In this talk, we introduce the organization of the project, initial scientific products including 4 papers published in Nature group journals, and the out-reach effort centered in organizing special graduate and undergraduate courses at Columbia recorded as voice-synchronized ppt presentations, and then broadcasted in a class-room of Tokyo University. Homepage address: http://www.phys.utk.edu/superpire/members.html

Analysis of water retention curve as a potential tool in comparing the effect of different soil management in two olive orchard in southern Spain

NASA Astrophysics Data System (ADS)

Guzmán, G.; Gómez, J. A.; Giráldez, J. V.

2010-05-01

Water soil erosion is one of the major concerns in agricultural areas in Southern Spain, and the use of cover crops has been recommended as an alternative to tillage to prevent, or mitigate, soil erosion. This change of soil management implies a progressive modification of soil chemical, biological and physical properties which to date, have been documented by a limited number of studies. In this communication we describe a methodology based on the modification of the water retention curves of intact cores, present the results obtained in two olive orchards in Southern Spain, and compare them with several chemical and physical properties measured simultaneously in the orchards. The experimental areas were located in Benacazón and Pedrera, Seville province in Southern Spain, and at each location two experimental plots were established. One of the plots was under traditional tillage management and the other under cover crop soil management. The slope at the plots was 12 and 4% respectively. Soil samples were taken at both plots differentiating between the inter tree areas and the under the olive canopy areas, between two different depths: 0-10 cm and 10-20 cm. These resulted in eight different sampling areas (2x2x2). Samples were taken three year after establishing the experiments. Water retention curves of soils were obtained as the average of replications per and using the Eijkelkamp Sand and Sand/Kaolin suction tables (0-500 hPa) and a Decagon's WP4-T dewpoint potentiometer (0-300•106 hPa). The latest was used to determine the residual water content. Experimental water retention curves were to two different models: van Genuchten (1980) and Kosugi (1994). Once modeling was done, the slope value of the curves at the inflexion point, proposed by Dexter (2004a, b, c) to estimate physical quality of soils, was calculated. This study presents and discusses the advantages and problems of the different approaches for determining the water retention curves, the potential of these curves to evaluate physical modifications of the soils, and compares them with the other soil properties measured at the experiments. References: Dexter, A. R. 2004. a.- Soil physical quality. Part I. Theory, effects of soil texture, density, and organic matter, and effects on root growth. Geoderma 120 (2004) 201-214. Dexter, A. R. 2004. b.- Soil physical quality. Part II. Friability, tillage, tilth and hardsetting. Geoderma 120 (2004) 215-225. Dexter, A. R. 2004. c.- Soil physical quality. Part III: Unsaturated hydraulic conductivity and general conclusions about S-theory. Geoderma 120 (2004) 227-239. Kosugi, K. 1994. Three-parameter lognormal distribution model for soil water retention. Water Resour. Re. 30: 891-901. van Genutchen, M.Th. A closed-form equation for predicting the hydraulic conductivity of unsaturated soils, Soil Science Society of America Journal, v.44, p.892-898,1980.

Umbral oscillations as resonant modes of magneto-atmospheric waves. [in sunspots

NASA Technical Reports Server (NTRS)

Scheuer, M. A.; Thomas, J. H.

1981-01-01

Umbral oscillations in sunspots are identified as a resonant response of the umbral atmosphere to forcing by oscillatory convection in the subphotosphere. The full, linearized equations for magnetoatmospheric waves are solved numerically for a detailed model of the umbral atmosphere, for both forced and free oscillations. Resonant 'fast' modes are found, the lowest mode having a period of 153 s, typical of umbral oscillations. A comparison is made with a similar analysis by Uchida and Sakurai (1975), who calculated resonant modes using an approximate ('quasi-Alfven') form of the wave equations. Whereas both analyses give an appropriate value for the period of oscillation, several new features of the motion follow from the full equations. The resonant modes are due to upward reflection in the subphotosphere (due to increasing sound speed) and downward reflection in the photosphere and low chromosphere (due to increasing Alfven speed); downward reflection at the chromosphere-corona transition is unimportant for these modes.

KSC-98pc1560

NASA Image and Video Library

1998-11-07

STS-95 Payload Specialist Chiaki Mukai, M.D. (center), with the National Space Development Agency of Japan (NASDA), poses for a photograph with NASDA President Isao Uchida (left). Behind her at the right is a representative of the European Space Agency (ESA). Mukai was one of a crew of seven aboard orbiter Discovery, which landed at KSC at 12:04 p.m. EST, after a successful mission spanning nine days and 3.6 million miles. The other crew members are Mission Commander Curtis L. Brown Jr.; Pilot Steven W. Lindsey; Mission Specialists Stephen K. Robinson; Scott E. Parazynski and Pedro Duque of Spain, with the European Space Agency; and Payload Specialist John H. Glenn Jr., a senator from Ohio. The mission included research payloads such as the Spartan solar-observing deployable spacecraft, the Hubble Space Telescope Orbital Systems Test Platform, the International Extreme Ultraviolet Hitchhiker, as well as the SPACEHAB single module with experiments on space flight and the aging process

Niches and Interspecific Competitive Relationships of the Parasitoids, Microplitis prodeniae and Campoletis chlorldeae, of the Oriental Leafworm Moth, Spodoptera litura, in Tobacco

PubMed Central

Zhou, Zhong-Shi; Chen, Ze-Peng; Xu, Zai-Fu

2010-01-01

Both Microplitis prodeniae Rao and Chandry (Hymenoptera: Bracondidae) and Campoletis chlorideae Uchida (Hymenoptera: Ichnumonidae) are major parasitoids of Spodoptera litura (Fabricious) (Lepidoptera: Noctuidae) in tobacco, Nicotiana tabacum L. (Solanales: Solanaceae) at Nanxiong, Guangdong Province, South China. The niches and interspecific competition relationships of the two species were studied. The results show that the competition between the two species for spatial and food resources was very intense, and C. chlorideae was always dominant when the two species compete for spatial and food resources in different periods. Thus C. chlorideae may drive M. prodeniae away when they occupy the same spatial or food resource. The adaptability of C. chlorideae to the environment in the tobacco fields may be greater than that of M. prodeniae, so C. chlorideae can maintain a higher population compared to that of M. prodeniae. PMID:20575741

A survey for potentially zoonotic gastrointestinal parasites of dogs and pigs in Cambodia.

PubMed

Inpankaew, Tawin; Murrell, K Darwin; Pinyopanuwat, Nongnuch; Chhoun, Chamnan; Khov, Kuong; Sem, Tharin; Sorn, San; Muth, Sinuon; Dalsgaard, Anders

2015-12-01

There is little information available on parasites of zoonotic significance in Cambodia. In 2011, in an effort to obtain data on potentially zoonotic gastrointestinal parasites in domestic animals, 50 dogs and 30 pigs residing in 38 households located in Ang Svay Check village, Takeo province, Cambodia were examined for parasites from faecal samples. The samples were processed using the formalin-ethyl acetate concentration technique (FECT). Hookworms were the most common zoonotic parasite found in dogs (80.0%) followed by Echinostomes (18.0%). While, in pigs, Fasciolopsis buski was the most common zoonotic parasite (30.0%) followed by Ascaris suum (13.3%). This study provides baseline data on gastrointestinal parasites in dogs and pigs from Cambodia and underscores the importance of domestic animals as reservoir hosts for human parasites for Cambodian veterinary and public health agencies. Follow-up studies are required to further taxonomically characterize these dog and pig parasites and to determine their role in human parasites in this community.

COBALT: Development of a Platform to Flight Test Lander GN&C Technologies on Suborbital Rockets

NASA Technical Reports Server (NTRS)

Carson, John M., III; Seubert, Carl R.; Amzajerdian, Farzin; Bergh, Chuck; Kourchians, Ara; Restrepo, Carolina I.; Villapando, Carlos Y.; O'Neal, Travis V.; Robertson, Edward A.; Pierrottet, Diego;

Root induced changes of effective 1D hydraulic properties in a soil column.

PubMed

Scholl, P; Leitner, D; Kammerer, G; Loiskandl, W; Kaul, H-P; Bodner, G

Roots are essential drivers of soil structure and pore formation. This study aimed at quantifying root induced changes of the pore size distribution (PSD). The focus was on the extent of clogging vs. formation of pores during active root growth. Parameters of Kosugi's lognormal PSD model were determined by inverse estimation in a column experiment with two cover crops (mustard, rye) and an unplanted control. Pore dynamics were described using a convection-dispersion like pore evolution model. Rooted treatments showed a wider range of pore radii with increasing volumes of large macropores >500 μm and micropores <2.5 μm, while fine macropores, mesopores and larger micropores decreased. The non-rooted control showed narrowing of the PSD and reduced porosity over all radius classes. The pore evolution model accurately described root induced changes, while structure degradation in the non-rooted control was not captured properly. Our study demonstrated significant short term root effects with heterogenization of the pore system as dominant process of root induced structure formation. Pore clogging is suggested as a partial cause for reduced pore volume. The important change in micro- and large macropores however indicates that multiple mechanic and biochemical processes are involved in root-pore interactions.

Total colonoscopy detects early colorectal cancer more frequently than advanced colorectal cancer in patients with fecal occult blood.

PubMed

Ozaki, Takuji; Tokunaga, Akira; Chihara, Naoto; Yoshino, Masanori; Bou, Hideki; Ogata, Masao; Watanabe, Masanori; Suzuki, Hideyuki; Uchida, Eiji

2010-08-01

The efficacy of total colonoscopy following a positive result of the fecal occult blood test (FOBT) for the early detection of colorectal cancer and polyps was evaluated. A total of 1,491 patients with positive FOBT results underwent total colonoscopy at the Institute of Gastroenterology, Nippon Medical School, Musashi Kosugi Hospital, from April 2002 through July 2009. Abnormalities were found in 1,312 of the 1,491 patients (88.0%). Ninety-six of the 1,491 patients (6.4%) were found to have early cancer, but 59 patients (4.0%) were found to have advanced cancer. The early cancers were treated with endoscopic mucosal resection or endoscopic submucosal dissection in 81 patients, with laparoscopy-assisted colectomy in 10 patients, and with open surgery in 5 patients. Fifty-one of the 59 patients with advanced colorectal cancer underwent conventional open surgery, and 8 patients underwent laparoscopic surgery. The cancers detected were more likely to be early cancers than advanced cancers. In addition to malignancies, other abnormalities found included inner or external hemorrhoids, diverticula of the colon, ulcerative colitis, ischemic colitis, infectious colitis, and colorectal polyps. Our results show that a high percentage of lesions detected with total colonoscopy following a positive FOBT result are early colorectal cancers and polyps.

An electrostatic charge measurement of blowing snow particles focusing on collision frequency to the snow surface

NASA Astrophysics Data System (ADS)

Omiya, S.; Sato, A.

2010-12-01

Blowing snow particles are known to have an electrostatic charge. This charge may be a contributing factor in the formation of snow drifts and snow cornices and changing of the trajectory of blowing snow particles. These formations and phenomena can cause natural disaster such as an avalanche and a visibility deterioration, and obstruct transportation during winter season. Therefore, charging phenomenon of the blowing snow particles is an important issue in terms of not only precise understanding of the particle motion but disaster prevention. The primary factor of charge accumulation to the blowing snow particles is thought to be due to “saltation” of them. The “saltation” is one of movement forms of blowing snow: when the snow particles are transported by the wind, they repeat frictional collisions with the snow surface. In previous studies, charge-to-mass ratios measured in the field were approximately -50 to -10 μC/kg, and in the wind tunnel were approximately -0.8 to -0.1 μC/kg. While there were qualitatively consistent in sign, negative, there were huge gaps quantitatively between them. One reason of those gaps is speculated to be due to differences in fetch. In other words, the difference of the collision frequency of snow particles to the snow surface has caused the gaps. But it is merely a suggestion and that has not been confirmed. The purpose of this experiment is to measure the charge of blowing snow particles focusing on the collision frequency and clarify the relationship between them. Experiments were carried out in the cryogenic wind tunnel of Snow and Ice Research Center (NIED, JAPAN). A Faraday cage and an electrometer were used to measure the charge of snow particles. These experiments were conducted over the hard snow surface condition to prevent the erosion of the snow surface and the generation of new snow particles from the surface. The collision frequency of particle was controlled by changing the wind velocity (4.5 to 7 m/s) under the fixed fetch (12m). The number of collisions of particle was converted from the wind velocity using an equation obtained by Kosugi et al. (2004). Blowing snow particles tend to accumulate negative charges gradually with increase of the number of collisions to the snow surface. As a result, it is demonstrated that the gaps between the field values and the wind tunnel ones were due to difference of the collision frequency of snow particles. Assuming a logarithmic relationship as first approximation between the measured charges and the number of collisions, the charge-to-mass ratios will reach roughly the same value which was obtained in the field with several hundreds collisions. For instance, fetch is needed roughly 200m for blowing snow particles to gain -30 μC/kg under the following conditions: air temperature -20 degrees Celsius, wind velocity 7m/s and hard snow surface. REFERENCE: Kosugi et al., (2004): Dependence of drifting snow saltation length on snow surface hardness. Cold Reg. Sci. Technol., 39, 133-139.

KSC-98pc1556

NASA Image and Video Library

1998-11-07

Following touchdown at 12:04 p.m. EST at the Shuttle Landing Facility, the STS-95 crew leave the Crew Transport Vehicle where they are met by (left to right) a Spanish dignitary; Isao Uchida, president of the National Space Development Agency of Japan (NASDA); Center Director Roy Bridges; and NASA Administrator Daniel Goldin. The crew, from left to right, are Mission Commander Curtis L. Brown Jr. (shaking hands with Bridges); Pilot Steven W. Lindsey; Payload Specialist John H. Glenn Jr., a senator from Ohio and one of the original Mercury 7 astronauts; Mission Specialist Scott E. Parazynski; Mission Specialist Stephen K. Robinson; Payload Specialist Chiaki Mukai, with the National Space Development Agency of Japan (NASDA); and Mission Specialist Pedro Duque of Spain, with the European Space Agency (ESA). The successful mission lasted nine days and included research payloads such as the Spartan solar-observing deployable spacecraft, the Hubble Space Telescope Orbital Systems Test Platform, the International Extreme Ultraviolet Hitchhiker, as well as the SPACEHAB single module with experiments on space flight and the aging process

STS-95 Payload Specialist Mukai poses with NASDA president

NASA Technical Reports Server (NTRS)

1998-01-01

STS-95 Payload Specialist Chiaki Mukai, M.D. (center), with the National Space Development Agency of Japan (NASDA), poses for a photograph with NASDA President Isao Uchida (left). Behind her at the right is a representative of the European Space Agency (ESA). Mukai was one of a crew of seven aboard orbiter Discovery, which landed at KSC at 12:04 p.m. EST, after a successful mission spanning nine days and 3.6 million miles. The other crew members are Mission Commander Curtis L. Brown Jr.; Pilot Steven W. Lindsey; Mission Specialists Stephen K. Robinson; Scott E. Parazynski and Pedro Duque of Spain, with the European Space Agency; and Payload Specialist John H. Glenn Jr., senator from Ohio. The mission included research payloads such as the Spartan solar-observing deployable spacecraft, the Hubble Space Telescope Orbital Systems Test Platform, the International Extreme Ultraviolet Hitchhiker, as well as the SPACEHAB single module with experiments on space flight and the aging process.

Preliminary analysis of seismic anisotropy in the uppermost mantle beneath NW Pacific reveled by the Normal Oceanic Mantle project

NASA Astrophysics Data System (ADS)

Takeo, A.; Isse, T.; Nishida, K.; Kawakatsu, H.; Shiobara, H.; Sugioka, H.; Ito, A.; Utada, H.

2013-12-01

Seismic structure including anisotropy in the oceanic uppermost mantle is essential for understanding deformation related to plate tectonics. Recent reports of a sharp discontinuity between the high velocity LID and the low velocity zone (LVZ) especially emphasize the importance of observation in oceanic basins apart from ridges and hotspots for determining the structure including LID and LVZ. In this study, we analyzed records of four broadband ocean bottom seismometers (BBOBSs) deployed in the northwest of Shatsky Rise by the pilot observation of the Normal Oceanic Mantle (NOMan) project in 2010-2011. We first measured average phase velocities of surface waves at periods of 5-30 s by the ambient-noise cross correlation method. Based on the method of Takeo et al. (in prep. GJI), we analyzed fundamental- and first higher- mode Rayleigh waves and fundamental-mode Love wave simultaneously by waveform fitting after the correction of clock delay. At periods of 25-100 s, we measured phase velocities of fundamental-mode surface waves by the array analysis of teleseismic waveforms. We then determined one-dimensional radially anisotropic structure beneath the array by the method of Takeo et al. (2013, JGR). The obtained structure shows transition from LID to LVZ at depths of 50-80km, which is marginally consistent with the depth of ~80 km estimated by a receiver function analysis at WP2 station situated at east of the studies area (Kawakatsu et al., 2009). The velocity gradient in the LID is almost zero and inconsistent with the simple cooling model of homogeneous oceanic plate. The average intensity of S-wave radial anisotropy at depths of ~10-220 km is ~3% (VSH>VSV). We further estimated S-wave azimuthal anisotropy at depths of ~30-100 km by analyzing teleseismic fundamental-mode Rayleigh waves at periods of 25-50 s. The intensity of anisotropy is 2-3%. The fastest direction is about N35W, close to that of Sn-wave velocity around WP2 station obtained by a refraction survey (Shinohara et al., 2008), and indicates the presence of past mantle flow almost perpendicular to the ancient mid ocean ridge or the presence of current mantle flow parallel to the plate motion at depths of 30-100 km. We will further analyze new records after the recovery of 13 BBOBSs in August 2013 and will present more detailed structure around Shatsky Rise. BBOBS stations of pilot observation of NOMan project (white crosses), WP2 station (circle), isochrons (white lines). Black bars show the fastest directions of Rayleigh wave at periods of 25-50 s and the fastest direction of Sn-wave velocity (Shinohara et al. 2008).

Black tea aroma inhibited increase of salivary chromogranin-A after arithmetic tasks.

PubMed

Yoto, Ai; Fukui, Natsuki; Kaneda, Chisa; Torita, Shoko; Goto, Keiichi; Nanjo, Fumio; Yokogoshi, Hidehiko

2018-01-24

Growing attention has been paid to the effects of food flavor components on alleviating negative brain functions caused by stressful lifestyles. In this study, we investigated the alleviating effect of two kinds of black tea aromas on physical and psychological stress induced by the Uchida-Kraepelin test, based on salivary chromogranin-A (CgA) levels as a stress marker and subjective evaluations (Profile of Mood States). Compared with the water exposure control, inhaling black tea aroma (Darjeeling and Assam in this study) induced lower salivary CgA concentration levels after 30 min of mental stress load tasks. This anti-stress effect of black tea aroma did not differ between the two tea types even though the concentration of the anti-stress components in the Darjeeling tea aroma was higher than that in the Assam aroma. However, Darjeeling tea aroma tended to decrease the tension and/or anxiety score immediately after the first exposure. Inhaling black tea aroma may diminish stress levels caused by arithmetic mental stress tasks, and Darjeeling tea aroma tended to improve mood before mental stress load.

Voices from the front lines. Four leaders on the cross-border challeng they've faced.

PubMed

Minguet, Luc; Caride, Eduardo; Yamaguchi, Takeo; Tedjarati, Shane

2014-09-01

Executives on the front lines of managing across borders share their insights: Luc Minguet, of France's Michelin, talks about the importance of cultural training not just for managers taking on assignments abroad but also for local employees who work with colleagues from around the world. He describes how his own experience learning to communicate across cultures reflects the tire-maker's broader practices. Eduardo Caride, of Madrid-based Telefónica, explains how the relatively young multinational is investing in a diverse talent mix as it strives to become a truly global company. Whereas early on, leaders relied on exporting Spanish managers abroad, he notes, the street now runs both ways. Takeo Yamaguchi, of Japan's Hitachi, details his efforts to create standardized global HR systems and processes across the conglomerate's 948 separate companies. "Three years ago, we had no systematic way of tracking employees, evaluating performance, or identifying future leaders," Yamaguchi says. "Today we do." And Shane Tedjarati, from the United States' Honeywell, talks about how the industrial powerhouse is shifting its strategy toward new regions, such as China, India, vietnam, and Indonesia. "We call these markets 'high-growth regions' instead of emerging markets," says Tedjarati, "because they now account for more than half of Honeywell's total growth."

Geochemical evidences of methane hydrate dissociation in Alaskan Beaufort Margin during Holocene

NASA Astrophysics Data System (ADS)

Uchida, M.; Rella, S.; Kubota, Y.; Kumata, H.; Mantoku, K.; Nishino, S.; Itoh, M.

2017-12-01

Alaskan Beaufort margin bear large abundances of sub-sea and permafrost methane hydrate[Ruppel, 2016]. During the Last Glacial, previous reported direct and indirect evidences accumulated from geochemical data from marginal sea sediment suggests that methane episodically released from hydrate trapped in the seafloor sediments[Kennett et al., 2000; Uchida et al., 2006, 2008; Cook et al, 2011]. Here we analyzed stable isotopes of foraminifera and molecular marker derived from the activity of methanotrophic bacteria from piston cores collected by the 2010 R/V Mirai cruise in Alaskan Beaufort Margin. Our data showed highly depleted 13C compositions of benthic foraminifera, suggesting indirect records of enhanced incorporation of 13C-depleted CO2 formed by methanotrophic process that use 12C-enriched methane as their main source of carbon. This is the first evidence of methane hydrate dissociation in Alaskan margin. Here we discussed timing of signals of methane dissociation with variability of sea ice and intermediate Atlantic water temperature. The dissociation of methane hydrate in the Alaskan Margin may be modulated by Atlantic warm intermediate water warming. Our results suggest that Arctic marginal regions bearing large amount methane hydrate may be a profound effect on future warming climate changes.

Observation of Reconnection Features in the Chromosphere through a Chromospheric Jet Observed by SOT/Hinode

NASA Astrophysics Data System (ADS)

Singh, K. A. P.; Isobe, H.; Shibata, K.

2012-08-01

High-resolution observations from Solar Optical Telescope (SOT) onboard Hinode has shown number of jet-like structures in the solar chromosphere. One of the key features in the observations is the clear presence of tiny, inverted Y-shaped jets called Chromospheric Anemone Jets. These jets are supposed to be formed as a result of the magnetic reconnection, however, whether and how fast magnetic reconnection is realized in partially ionized, fully collisional chromosphere is poorly understood. In this paper, we report the observation of a well resolved jet phenomenon observed from SOT. The jets were found to recur at the same location. We observed multiple blobs ejected along the jet. The jets occur after the ejection of blobs. It is noticed that the brightness enhancements at the footpoint of the jet are related with the height of the jet. These features indicate an important role of plasmoid dynamics and intermittent nature of the chromospheric reconnection. The lifetime of the plasmoid is 30 s - 50 s. We noticed the undulations in chromospheric anemone jets. The evolution of a single jet is consistent with the Sweeping-Magnetic-Twist mechanism proposed by Shibata and Uchida (1986).

STS-87 crew and VIPs inspect the orbiter Columbia after landing

NASA Technical Reports Server (NTRS)

1997-01-01

STS-87 crew members regard the tiles underneath the orbiter Columbia shortly after its return to Runway 33 at Kennedy Space Center's Shuttle Landing Facility. Pointing to the tiles is the president of the National Space Development Agency (NASDA) of Japan, Isao Uchida, who is standing next to NASA Administrator Daniel Goldin. STS-87 Commander Kevin Kregel, at right, looks on as Pilot Steve Lindsey follows behind him to continue inspecting the orbiter. STS-87 concluded its mission with a main gear touchdown at 7:20:04 a.m. EST Dec. 5, drawing the 15-day, 16-hour and 34-minute-long mission of 6.5 million miles to a close. Also onboard the orbiter were Mission Specialists Winston Scott; Kalpana Chawla, Ph.D.; and Takao Doi, Ph.D., of NASDA; along with Payload Specialist Leonid Kadenyuk of the National Space Agency of Ukraine. During the 88th Space Shuttle mission, the crew performed experiments on the United States Microgravity Payload-4 and pollinated plants as part of the Collaborative Ukrainian Experiment. This was the 12th landing for Columbia at KSC and the 41st KSC landing in the history of the Space Shuttle program.

STS-87 crew greet VIPs after successful landing at KSC

NASA Technical Reports Server (NTRS)

1997-01-01

STS-87 Commander Kevin Kregel, center, shakes hands with the deputy director general of the National Space Agency of Ukraine (NSAU), Eduard Kuznetsov, at far right. Next to Kuznetsov is the Honorable Yuri Shcherbak, Ukraine's ambassador to the United States, standing with the president of the National Space Development Agency (NASDA) of Japan, Isao Uchida, and NASA Administrator Daniel Goldin (center). Approaching the VIPs from the left of the photo are Mission Specialists Kalpana Chawla, Ph.D., and Takao Doi, Ph.D., of NASDA. STS-87 concluded its mission with a main gear touchdown at 7:20:04 a.m. EST Dec. 5, at KSC's Shuttle Landing Facility Runway 33, drawing the 15-day, 16- hour and 34-minute-long mission of 6.5 million miles to a close. Also onboard the orbiter were Pilot Steven Lindsey; Mission Specialist Winston Scott; and Payload Specialist Leonid Kadenyuk of NSAU. During the 88th Space Shuttle mission, the crew performed experiments on the United States Microgravity Payload-4 and pollinated plants as part of the Collaborative Ukrainian Experiment. This was the 12th landing for Columbia at KSC and the 41st KSC landing in the history of the Space Shuttle program.

KSC-97PC1744

NASA Image and Video Library

1997-12-05

STS-87 Commander Kevin Kregel, center, shakes hands with the deputy director general of the National Space Agency of Ukraine (NSAU), Eduard Kuznetsov, at far right. Next to Kuznetsov is the Honorable Yuri Shcherbak, Ukraine's ambassador to the United States, standing with the president of the National Space Development Agency (NASDA) of Japan, Isao Uchida, and NASA Administrator Daniel Goldin (center). Approaching the VIPs from the left of the photo are Mission Specialists Kalpana Chawla, Ph.D., and Takao Doi, Ph.D., of NASDA. STS-87 concluded its mission with a main gear touchdown at 7:20:04 a.m. EST Dec. 5, at KSC's Shuttle Landing Facility Runway 33, drawing the 15-day, 16-hour and 34-minute-long mission of 6.5 million miles to a close. Also onboard the orbiter were Pilot Steven Lindsey; Mission Specialist Winston Scott; and Payload Specialist Leonid Kadenyuk of NSAU. During the 88th Space Shuttle mission, the crew performed experiments on the United States Microgravity Payload-4 and pollinated plants as part of the Collaborative Ukrainian Experiment. This was the 12th landing for Columbia at KSC and the 41st KSC landing in the history of the Space Shuttle program

Insight into the molecular and functional diversity of cnidarian neuropeptides.

PubMed

Takahashi, Toshio; Takeda, Noriyo

2015-01-23

Cnidarians are the most primitive animals to possess a nervous system. This phylum is composed of the classes Scyphozoa (jellyfish), Cubozoa (box jellyfish), and Hydrozoa (e.g., Hydra, Hydractinia), which make up the subphylum Medusozoa, as well as the class Anthozoa (sea anemones and corals). Neuropeptides have an early evolutionary origin and are already abundant in cnidarians. For example, from the cnidarian Hydra, a key model system for studying the peptides involved in developmental and physiological processes, we identified a wide variety of novel neuropeptides from Hydra magnipapillata (the Hydra Peptide Project). Most of these peptides act directly on muscle cells and induce contraction and relaxation. Some peptides are involved in cell differentiation and morphogenesis. In this review, we describe FMRFamide-like peptides (FLPs), GLWamide-family peptides, and the neuropeptide Hym-355; FPQSFLPRGamide. Several hundred FLPs have been isolated from invertebrate animals such as cnidarians. GLWamide-family peptides function as signaling molecules in muscle contraction, metamorphosis, and settlement in cnidarians. Hym-355; FPQSFLPRGamide enhances neuronal differentiation in Hydra. Recently, GLWamide-family peptides and Hym-355; FPQSFLPRGamide were shown to trigger oocyte maturation and subsequent spawning in the hydrozoan jellyfish Cytaeis uchidae. These findings suggest the importance of these neuropeptides in both developmental and physiological processes.

Prevalence of Intestinal Helminths among Inhabitants of Cambodia (2006-2011)

PubMed Central

Yong, Tai-Soon; Sohn, Woon-Mok; Eom, Keeseon S.; Jeoung, Hoo-Gn; Hoang, Eui-Hyug; Yoon, Cheong-Ha; Jung, Bong-Kwang; Lee, Soon-Hyung; Sinuon, Muth; Socheat, Duong

2014-01-01

In order to investigate the status of intestinal helminthic infections in Cambodia, epidemiological surveys were carried out on a national scale, including 19 provinces. A total of 32,201 fecal samples were collected from schoolchildren and adults between 2006 and 2011 and examined once by the Kato-Katz thick smear technique. The overall egg positive rate of intestinal helminths was 26.2%. The prevalence of hookworms was the highest (9.6%), followed by that of Opisthorchis viverrini/minute intestinal flukes (Ov/MIF) (5.7%), Ascaris lumbricoides (4.6%), and Trichuris trichiura (4.1%). Other types of parasites detected were Enterobius vermicularis (1.1%), Taenia spp. (0.4%), and Hymenolepis spp. (0.2%). The northwestern regions such as the Siem Reap, Oddar Meanchey, and Banteay Meanchey Provinces showed higher prevalences (17.4-22.3%) of hookworms than the other localities. The southwestern areas, including Koh Kong and Preah Sihanouk Provinces showed higher prevalences of A. lumbricoides (17.5-19.2%) and T. trichiura (6.1-21.0%). Meanwhile, the central and southern areas, in particular, Takeo and Kampong Cham Provinces, showed high prevalences of Ov/MIF (23.8-24.0%). The results indicate that a considerably high prevalence of intestinal helminths has been revealed in Cambodia, and thus sustained national parasite control projects are necessary to reduce morbidity due to parasitic infections in Cambodia. PMID:25548418

Prevalence of intestinal helminths among inhabitants of Cambodia (2006-2011).

PubMed

Yong, Tai-Soon; Chai, Jong-Yil; Sohn, Woon-Mok; Eom, Keeseon S; Jeoung, Hoo-Gn; Hoang, Eui-Hyug; Yoon, Cheong-Ha; Jung, Bong-Kwang; Lee, Soon-Hyung; Sinuon, Muth; Socheat, Duong

2014-12-01

In order to investigate the status of intestinal helminthic infections in Cambodia, epidemiological surveys were carried out on a national scale, including 19 provinces. A total of 32,201 fecal samples were collected from schoolchildren and adults between 2006 and 2011 and examined once by the Kato-Katz thick smear technique. The overall egg positive rate of intestinal helminths was 26.2%. The prevalence of hookworms was the highest (9.6%), followed by that of Opisthorchis viverrini/minute intestinal flukes (Ov/MIF) (5.7%), Ascaris lumbricoides (4.6%), and Trichuris trichiura (4.1%). Other types of parasites detected were Enterobius vermicularis (1.1%), Taenia spp. (0.4%), and Hymenolepis spp. (0.2%). The northwestern regions such as the Siem Reap, Oddar Meanchey, and Banteay Meanchey Provinces showed higher prevalences (17.4-22.3%) of hookworms than the other localities. The southwestern areas, including Koh Kong and Preah Sihanouk Provinces showed higher prevalences of A. lumbricoides (17.5-19.2%) and T. trichiura (6.1-21.0%). Meanwhile, the central and southern areas, in particular, Takeo and Kampong Cham Provinces, showed high prevalences of Ov/MIF (23.8-24.0%). The results indicate that a considerably high prevalence of intestinal helminths has been revealed in Cambodia, and thus sustained national parasite control projects are necessary to reduce morbidity due to parasitic infections in Cambodia.

Development and evaluation of a time-dependent radiographic technology by using a muon read out module

NASA Astrophysics Data System (ADS)

Kusagaya, T.; Uchida, T.; Tanaka, H. K. M.; Tanaka, M.

2012-04-01

We will present a real-time monitoring system for cosmic-ray muon radiography as an application of a readout module developed by T. Uchida et al [1,2]. The readout module was developed originally for probing the internal structure of volcanoes in 2008 [3]. Its features are small in size, low power consumption, and the capability to access remotely via Ethernet. The current statistics data of cosmic-ray muons can be read from a PC placed far from the module at anytime. By using this feature, we constructed a real-time monitoring system. As a test experiment, we observed fluid movement in a cylinder with a diameter of 112 meters water equivalent. In this work, we succeeded to resolve the fluid movement in the cylinder. We varied the fluid level inside the cylinder and measured the muon intensity. We found that the muon intensity correlates inversely with the fluid level: the muon intensity increases for the lower fluid level and decreases for the higher fluid level. Although the time resolution of muon radiography was sufficient to resolve changes in the fluid level, an adequate time window has to be chosen for different operating conditions. We anticipate that this system will be applicable to exploring high-speed phenomena in a gigantic object.

Molecular cloning and nucleotide sequences of the genes for two essential proteins constituting a novel enzyme system for heptaprenyl diphosphate synthesis.

PubMed

Koike-Takeshita, A; Koyama, T; Obata, S; Ogura, K

1995-08-04

The genes encoding two dissociable components essential for Bacillus stearothermophilus heptaprenyl diphosphate synthase (all-trans-hexparenyl-diphosphate:isopentenyl-diphosphate hexaprenyl-trans-transferase, EC 2.5.1.30) were cloned, and their nucleotide sequences were determined. Sequence analyses revealed the presence of three open reading frames within 2,350 base pairs, designated as ORF-1, ORF-2, and ORF-3 in order of nucleotide sequence, which encode proteins of 220, 234, and 323 amino acids, respectively. Deletion experiments have shown that expression of the enzymatic activity requires the presence of ORF-1 and ORF-3, but ORF-2 is not essential. As a result, this enzyme was proved genetically to consist of two different protein compounds with molecular masses of 25 kDa (Component I) and 36 kDa (Component II), encoded by two of the three tandem genes. The protein encoded by ORF-1 has no similarity to any protein so far registered. However, the protein encoded by ORF-3 shows a 32% similarity to the farnesyl diphosphate synthase of the same bacterium and has seven highly conserved regions that have been shown typical in prenyltransferases (Koyama, T., Obata, S., Osabe, M., Takeshita, A., Yokoyama, K., Uchida, M., Nishino, T., and Ogura, K. (1993) J. Biochem. (Tokyo) 113, 355-363).

Masticatory performance alters stress relief effect of gum chewing.

PubMed

Nishigawa, Keisuke; Suzuki, Yoshitaka; Matsuka, Yoshizo

2015-10-01

We evaluated the effects of gum chewing on the response to psychological stress induced by a calculation task and investigated the relationship between this response and masticatory performance. Nineteen healthy adult volunteers without dental problems undertook the Uchida-Kraepelin (UK) test (30 min of reiterating additions of one-digit numbers). Before and immediately after the test, saliva samples were collected from the sublingual area of the participants. Three min after the UK test, the participants were made to chew flavorless gum for 3 min, and the final saliva samples were collected 10 min after the UK test. The experiment was performed without gum chewing on a different day. Masticatory performance was evaluated using color-changing chewing gum. Salivary CgA levels at immediately and 10 min after the UK test were compared with and without gum chewing condition. Two-way repeated measures analysis of variance revealed significant interaction between gum chewing condition and changes in CgA levels during post 10 min UK test period. A significant correlation was found between changes in CgA levels and masticatory performance in all participants. Our results indicate that gum chewing may relieve stress responses; however, high masticatory performance is required to achieve this effect. Copyright © 2015 Japan Prosthodontic Society. Published by Elsevier Ltd. All rights reserved.

Insight into the Molecular and Functional Diversity of Cnidarian Neuropeptides

PubMed Central

Takahashi, Toshio; Takeda, Noriyo

2015-01-01

Cnidarians are the most primitive animals to possess a nervous system. This phylum is composed of the classes Scyphozoa (jellyfish), Cubozoa (box jellyfish), and Hydrozoa (e.g., Hydra, Hydractinia), which make up the subphylum Medusozoa, as well as the class Anthozoa (sea anemones and corals). Neuropeptides have an early evolutionary origin and are already abundant in cnidarians. For example, from the cnidarian Hydra, a key model system for studying the peptides involved in developmental and physiological processes, we identified a wide variety of novel neuropeptides from Hydra magnipapillata (the Hydra Peptide Project). Most of these peptides act directly on muscle cells and induce contraction and relaxation. Some peptides are involved in cell differentiation and morphogenesis. In this review, we describe FMRFamide-like peptides (FLPs), GLWamide-family peptides, and the neuropeptide Hym-355; FPQSFLPRGamide. Several hundred FLPs have been isolated from invertebrate animals such as cnidarians. GLWamide-family peptides function as signaling molecules in muscle contraction, metamorphosis, and settlement in cnidarians. Hym-355; FPQSFLPRGamide enhances neuronal differentiation in Hydra. Recently, GLWamide-family peptides and Hym-355; FPQSFLPRGamide were shown to trigger oocyte maturation and subsequent spawning in the hydrozoan jellyfish Cytaeis uchidae. These findings suggest the importance of these neuropeptides in both developmental and physiological processes. PMID:25625515

Offering integrated care for HIV/AIDS, diabetes and hypertension within chronic disease clinics in Cambodia.

PubMed

Janssens, B; Van Damme, W; Raleigh, B; Gupta, J; Khem, S; Soy Ty, K; Vun, Mc; Ford, N; Zachariah, R

2007-11-01

In Cambodia, care for people with HIV/AIDS (prevalence 1.9%) is expanding, but care for people with type II diabetes (prevalence 5-10%), arterial hypertension and other treatable chronic diseases remains very limited. We describe the experience and outcomes of offering integrated care for HIV/AIDS, diabetes and hypertension within the setting of chronic disease clinics. Chronic disease clinics were set up in the provincial referral hospitals of Siem Reap and Takeo, 2 provincial capitals in Cambodia. At 24 months of care, 87.7% of all HIV/AIDS patients were alive and in active follow-up. For diabetes patients, this proportion was 71%. Of the HIV/AIDS patients, 9.3% had died and 3% were lost to follow-up, while for diabetes this included 3 (0.1%) deaths and 28.9% lost to follow-up. Of all diabetes patients who stayed more than 3 months in the cohort, 90% were still in follow-up at 24 months. Over the first three years, the chronic disease clinics have demonstrated the feasibility of integrating care for HIV/AIDS with non-communicable chronic diseases in Cambodia. Adherence support strategies proved to be complementary, resulting in good outcomes. Services were well accepted by patients, and this has had a positive effect on HIV/AIDS-related stigma. This experience shows how care for HIV/AIDS patients can act as an impetus to tackle other common chronic diseases.

Effects of oral administration of caffeine and D-ribose on mental fatigue.

PubMed

Ataka, Suzuka; Tanaka, Masaaki; Nozaki, Satoshi; Mizuma, Hiroshi; Mizuno, Kei; Tahara, Tsuyoshi; Sugino, Tomohiro; Shirai, Tomoko; Kajimoto, Yoshitaka; Kuratsune, Hirohiko; Kajimoto, Osami; Watanabe, Yasuyoshi

2008-03-01

We examined the effects of administering two different candidate antifatigue substances, caffeine and D-ribose, on mental fatigue. In a double-blinded, placebo-controlled, three-way crossover design, 17 healthy volunteers were randomized to oral caffeine (200 mg/d), D-ribose (2000 mg/d), or placebo for 8 d. As fatigue-inducing mental tasks, subjects performed a 30-min Uchida-Kraepelin psychodiagnostic test and a 30-min advanced trail-making test on four occasions. During the tasks, the task performance of the caffeine group was better than that of the placebo group. However, after the fatigue-inducing tasks, although subjective perception of fatigue, motivation, or sleepiness was not significantly different, plasma branched-chain amino acid levels in the caffeine group were lower than those of the placebo group. Administration of D-ribose had no effect. Because plasma branched-chain amino acid levels are decreased by mental fatigue, these results suggest that administration of caffeine improved task performance through the enhancement of central nervous system activity without increasing the sensation of fatigue. However, further decreases in branched-chain amino acid levels indicate that caffeine might promote deeper fatigue than placebo. Unfortunately, research subsequent to our study design has shown that D-ribose dosing higher than we used is needed to see a clinical effect and therefore no conclusions can be made from this study as to the efficacy of D-ribose.

Ultrasound-guided transhepatic puncture of the hepatic veins for TIPS placement.

PubMed

Gazzera, C; Fonio, P; Gallesio, C; Camerano, F; Doriguzzi Breatta, A; Righi, D; Veltri, A; Gandini, G

2013-04-01

This retrospective analysis was carried out to assess the feasibility and results of transjugular intrahepatic portal systemic shunt (TIPS) performed with ultrasound (US)-guided percutaneous puncture of the hepatic veins. Over a period of 3 years, 153 patients were treated with TIPS at our centre. In eight cases, a percutaneous puncture of the middle (n=7) or right (n=1) hepatic vein was required because the hepatic vein ostium was not accessible. Indications for TIPS were bleeding (n=1), Budd-Chiari syndrome (n=1), ascites (n=2), reduced portal flow (n=1) and incomplete portal thrombosis (n=3). A 0.018-in. guidewire was anterogradely introduced into the hepatic vein to the inferior vena cava (IVC) through a 21-gauge needle. In the meantime, a 25-mm snare-loop catheter was introduced through the jugular access to retrieve the guidewire, achieving through-andthrough access. Then, a Rosch-Uchida set was used to place the TIPS with the traditional technique. Technical success was achieved in all patients. There was one case of stent thrombosis. One patient died of pulmonary oedema. Three patients were eligible for liver transplantation, whereas the others were excluded due to shunt thrombosis (n=1) and previous nonhepatic neoplasms (n=3). The percutaneous approach to hepatic veins is rapid and safe and may be useful for avoiding traumatic liver injuries.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Maynar, Manuel; Llorens, Rafael; Lopez-Sanchez, Carmen

Purpose. A method to create an extraluminal femoropopliteal bypass graft using endovascular techniques was evaluated in situ on cadaver extremities in an attempt to develop a minimally invasive alternative technique for the management of infrainguinal occlusive arterial disease. Methods. The endovascular placement of an extraluminal femoropopliteal bypass graft was undertaken in 5 cadaver legs. Following percutaneous access to the popliteal artery (PA) or common femoral artery (CFA), a Rosch-Uchida needle was used to perforate the vascular wall, followed by the creation of an extraluminal tract using a looped wire and catheter. Once the desired level was reached the needle wasmore » again used to perforate the vascular wall of the proximal superficial femoral artery (SFA) or PA depending on the access used. Self-expanding expanded polytetrafluoroethylene (ePTFE) stent-grafts were then deployed to establish the extraluminal femoropopliteal bypass connecting the two arterial puncture sites. Following dilatation of the stent-graft, angiography was performed to assess the endoprostheses and to look for contrast leaks. Results. Technical success was achieved in all 5 legs. Procedure time varied from 15 to 30 min. The angiographic studies performed immediately after completion of the bypass procedure showed patency of the grafts with no evidence of kinking or leakage in any of the cases. Conclusion. This study has proved that the endovascular placement of an extraluminal femoropopliteal bypass graft in human cadaver legs using endovascular techniques under fluoroscopic control is technically feasible.« less

Inferring rate and state friction parameters from a rupture model of the 1995 Hyogo-ken Nanbu (Kobe) Japan earthquake

USGS Publications Warehouse

Guatteri, Mariagiovanna; Spudich, P.; Beroza, G.C.

2001-01-01

We consider the applicability of laboratory-derived rate- and state-variable friction laws to the dynamic rupture of the 1995 Kobe earthquake. We analyze the shear stress and slip evolution of Ide and Takeo's [1997] dislocation model, fitting the inferred stress change time histories by calculating the dynamic load and the instantaneous friction at a series of points within the rupture area. For points exhibiting a fast-weakening behavior, the Dieterich-Ruina friction law, with values of dc = 0.01-0.05 m for critical slip, fits the stress change time series well. This range of dc is 10-20 times smaller than the slip distance over which the stress is released, Dc, which previous studies have equated with the slip-weakening distance. The limited resolution and low-pass character of the strong motion inversion degrades the resolution of the frictional parameters and suggests that the actual dc is less than this value. Stress time series at points characterized by a slow-weakening behavior are well fitted by the Dieterich-Ruina friction law with values of dc ??? 0.01-0.05 m. The apparent fracture energy Gc can be estimated from waveform inversions more stably than the other friction parameters. We obtain a Gc = 1.5??106 J m-2 for the 1995 Kobe earthquake, in agreement with estimates for previous earthquakes. From this estimate and a plausible upper bound for the local rock strength we infer a lower bound for Dc of about 0.008 m. Copyright 2001 by the American Geophysical Union.

Indirect estimation of the Convective Lognormal Transfer function model parameters for describing solute transport in unsaturated and undisturbed soil.

PubMed

Mohammadi, Mohammad Hossein; Vanclooster, Marnik

2012-05-01

Solute transport in partially saturated soils is largely affected by fluid velocity distribution and pore size distribution within the solute transport domain. Hence, it is possible to describe the solute transport process in terms of the pore size distribution of the soil, and indirectly in terms of the soil hydraulic properties. In this paper, we present a conceptual approach that allows predicting the parameters of the Convective Lognormal Transfer model from knowledge of soil moisture and the Soil Moisture Characteristic (SMC), parameterized by means of the closed-form model of Kosugi (1996). It is assumed that in partially saturated conditions, the air filled pore volume act as an inert solid phase, allowing the use of the Arya et al. (1999) pragmatic approach to estimate solute travel time statistics from the saturation degree and SMC parameters. The approach is evaluated using a set of partially saturated transport experiments as presented by Mohammadi and Vanclooster (2011). Experimental results showed that the mean solute travel time, μ(t), increases proportionally with the depth (travel distance) and decreases with flow rate. The variance of solute travel time σ²(t) first decreases with flow rate up to 0.4-0.6 Ks and subsequently increases. For all tested BTCs predicted solute transport with μ(t) estimated from the conceptual model performed much better as compared to predictions with μ(t) and σ²(t) estimated from calibration of solute transport at shallow soil depths. The use of μ(t) estimated from the conceptual model therefore increases the robustness of the CLT model in predicting solute transport in heterogeneous soils at larger depths. In view of the fact that reasonable indirect estimates of the SMC can be made from basic soil properties using pedotransfer functions, the presented approach may be useful for predicting solute transport at field or watershed scales. Copyright © 2012 Elsevier B.V. All rights reserved.

Indirect estimation of the Convective Lognormal Transfer function model parameters for describing solute transport in unsaturated and undisturbed soil

NASA Astrophysics Data System (ADS)

Mohammadi, Mohammad Hossein; Vanclooster, Marnik

2012-05-01

Solute transport in partially saturated soils is largely affected by fluid velocity distribution and pore size distribution within the solute transport domain. Hence, it is possible to describe the solute transport process in terms of the pore size distribution of the soil, and indirectly in terms of the soil hydraulic properties. In this paper, we present a conceptual approach that allows predicting the parameters of the Convective Lognormal Transfer model from knowledge of soil moisture and the Soil Moisture Characteristic (SMC), parameterized by means of the closed-form model of Kosugi (1996). It is assumed that in partially saturated conditions, the air filled pore volume act as an inert solid phase, allowing the use of the Arya et al. (1999) pragmatic approach to estimate solute travel time statistics from the saturation degree and SMC parameters. The approach is evaluated using a set of partially saturated transport experiments as presented by Mohammadi and Vanclooster (2011). Experimental results showed that the mean solute travel time, μt, increases proportionally with the depth (travel distance) and decreases with flow rate. The variance of solute travel time σ2t first decreases with flow rate up to 0.4-0.6 Ks and subsequently increases. For all tested BTCs predicted solute transport with μt estimated from the conceptual model performed much better as compared to predictions with μt and σ2t estimated from calibration of solute transport at shallow soil depths. The use of μt estimated from the conceptual model therefore increases the robustness of the CLT model in predicting solute transport in heterogeneous soils at larger depths. In view of the fact that reasonable indirect estimates of the SMC can be made from basic soil properties using pedotransfer functions, the presented approach may be useful for predicting solute transport at field or watershed scales.

Function of a Glutamine Synthetase-Like Protein in Bacterial Aniline Oxidation via γ-Glutamylanilide

PubMed Central

Ohara, Akira; Sakae, Shinji; Okamoto, Yasuhiro; Kitamura, Chitoshi; Kato, Dai-ichiro; Negoro, Seiji

2013-01-01

Acinetobacter sp. strain YAA has five genes (atdA1 to atdA5) involved in aniline oxidation as a part of the aniline degradation gene cluster. From sequence analysis, the five genes were expected to encode a glutamine synthetase (GS)-like protein (AtdA1), a glutamine amidotransferase-like protein (AtdA2), and an aromatic compound dioxygenase (AtdA3, AtdA4, and AtdA5) (M. Takeo, T. Fujii, and Y. Maeda, J. Ferment. Bioeng. 85:17-24, 1998). A recombinant Pseudomonas strain harboring these five genes quantitatively converted aniline into catechol, demonstrating that catechol is the major oxidation product from aniline. To elucidate the function of the GS-like protein AtdA1 in aniline oxidation, we purified it from recombinant Escherichia coli harboring atdA1. The purified AtdA1 protein produced gamma-glutamylanilide (γ-GA) quantitatively from aniline and l-glutamate in the presence of ATP and MgCl2. This reaction was identical to glutamine synthesis by GS, except for the use of aniline instead of ammonia as the substrate. Recombinant Pseudomonas strains harboring the dioxygenase genes (atdA3 to atdA5) were unable to degrade aniline but converted γ-GA into catechol, indicating that γ-GA is an intermediate to catechol and a direct substrate for the dioxygenase. Unexpectedly, a recombinant Pseudomonas strain harboring only atdA2 hydrolyzed γ-GA into aniline, reversing the γ-GA formation by AtdA1. Deletion of atdA2 from atdA1 to atdA5 caused γ-GA accumulation from aniline in recombinant Pseudomonas cells and inhibited the growth of a recombinant Acinetobacter strain on aniline, suggesting that AtdA2 prevents γ-GA accumulation that is harmful to the host cell. PMID:23893114

Function of a glutamine synthetase-like protein in bacterial aniline oxidation via γ-glutamylanilide.

PubMed

Takeo, Masahiro; Ohara, Akira; Sakae, Shinji; Okamoto, Yasuhiro; Kitamura, Chitoshi; Kato, Dai-ichiro; Negoro, Seiji

2013-10-01

Acinetobacter sp. strain YAA has five genes (atdA1 to atdA5) involved in aniline oxidation as a part of the aniline degradation gene cluster. From sequence analysis, the five genes were expected to encode a glutamine synthetase (GS)-like protein (AtdA1), a glutamine amidotransferase-like protein (AtdA2), and an aromatic compound dioxygenase (AtdA3, AtdA4, and AtdA5) (M. Takeo, T. Fujii, and Y. Maeda, J. Ferment. Bioeng. 85:17-24, 1998). A recombinant Pseudomonas strain harboring these five genes quantitatively converted aniline into catechol, demonstrating that catechol is the major oxidation product from aniline. To elucidate the function of the GS-like protein AtdA1 in aniline oxidation, we purified it from recombinant Escherichia coli harboring atdA1. The purified AtdA1 protein produced gamma-glutamylanilide (γ-GA) quantitatively from aniline and l-glutamate in the presence of ATP and MgCl2. This reaction was identical to glutamine synthesis by GS, except for the use of aniline instead of ammonia as the substrate. Recombinant Pseudomonas strains harboring the dioxygenase genes (atdA3 to atdA5) were unable to degrade aniline but converted γ-GA into catechol, indicating that γ-GA is an intermediate to catechol and a direct substrate for the dioxygenase. Unexpectedly, a recombinant Pseudomonas strain harboring only atdA2 hydrolyzed γ-GA into aniline, reversing the γ-GA formation by AtdA1. Deletion of atdA2 from atdA1 to atdA5 caused γ-GA accumulation from aniline in recombinant Pseudomonas cells and inhibited the growth of a recombinant Acinetobacter strain on aniline, suggesting that AtdA2 prevents γ-GA accumulation that is harmful to the host cell.

A call for action on disarmament and population.

PubMed

Fukuda, T

1994-08-01

Takeo Fukuda, former prime minister of Japan, opened the 12th session of the InterAction Council in Dresden, Germany, with a speech on June 7, 1994. The council has three priority concerns: world peace and disarmament; global problems of population increase, environmental degradation, resource and energy questions; and the question of activating the world economy. The cold war structure has crumbled, but stockpiled nuclear weapons still pose a threat to the world. Under such a situation, the role of multilateral organizations, particularly the UN, has become increasingly important. The world's political management henceforth should encompass North-South-East-West, the entire world, and multilateral institutions should be further strengthened. Special attention should be paid to the neglected North-South relations. The emergence of the mass-consumption society has generated the era of finite resources and environment. The rapidly increasing global population further complicates this issue. Unless the global problems of population, environment, resources, and energy are alleviated, the future for posterity is dubious. The population of the world is increasing by 100 million each year. It was 1.6 billion at the beginning of this century, but it is expected to increase to 6.4 billion at the end of the century, to 8 billion by the year 2020, and to 10 billion by 2050. Resources, energy, environment, and global population are mutually linked; the problem of balancing the rapidly increasing population and the food supply must be addressed. The hope is that the Food and Agriculture Organization will come up with measures to cope with this problem by forecasting the food supply and demand and population. The InterAction Council will hold its 13th session in Tokyo in 1995.

Takotsubo Cardiomyopathy

PubMed Central

Tiyyagura, Satish; Fuster, Valentin

2008-01-01

Background Takotsubo cardiomyopathy is a novel, yet well-described, reversible cardiomyopathy triggered by profound psychological or physical stress with a female predominance. Objective This review is designed to increase general clinician awareness about the diagnosis, incidence, pathogenesis, and therapies of this entity. Data Sources A complete search of multiple electronic databases (Pubmed, EMBASE, Science Citation Index) was carried out to identify all full-text, English-language articles published from 1980 to the present date and relevant to this review. Review Methods The following search terms were used: takotsubo cardiomyopathy, stress-induced cardiomyopathy, and left ventricular apical ballooning syndrome. Citation lists from identified articles were subsequently reviewed and pertinent articles were further identified. Results Takotsubo cardiomyopathy is typically characterized by the following: 1) acute onset of ischemic-like chest pain or dyspnea, 2) transient apical and mid-ventricular regional wall-motion abnormality, 3) minor elevation of cardiac biomarkers, 4) dynamic electrocardiographic changes, and 5) the absence of epicardial coronary artery disease. The pathogenesis of the syndrome is unknown but has mostly been associated with acute emotional or physiologic stressors. Dote, Sato, Tateishi, Uchida, Ishihara (J Cardiol. 21(2):203–214, 1991); Desmet, Adriaenssens, Dens (Heart. 89(9):1027–1031, Sep., 2003); Bybee, Kara, Prasad, et al. (Ann Intern Med. 141(11):858–865, Dec 7, 2004); Sharkey, Lesser, Zenovich, et al. (Circulation. 111(4):472–479, Feb 1, 2005) The short and long-term prognosis of these patients is overwhelmingly favorable and often only requires supportive therapy. Conclusion Whether an emotional or physical event precedes one’s symptoms, it is apparent that takotsubo cardiomyopathy case presentations mimic ST-segment elevation myocardial infarction, and thus is an important entity to be recognized by the medical community. PMID:18688681

Differential immunosuppression by Campoletis chlorideae eggs and ichnovirus in larvae of Helicoverpa armigera and Spodoptera exigua.

PubMed

Han, Li-Bin; Yin, Li-Hong; Huang, Ling-Qiao; Wang, Chen-Zhu

2015-09-01

The ichneumonid wasp, Campoletis chlorideae Uchida, successfully develops in the cotton bollworm Helicoverpa armigera (Hübner), but rarely survives in the beet armyworm Spodoptera exigua (Hübner) due to the encapsulation by host immunity. In this study, we investigated the role of C. chlorideae ichnovirus (CcIV) and eggs in the evasion of the host immune system. Washed eggs of different types, immature, mature, newly laid, or pretreated with protease K, were injected alone or with the calyx fluid containing CcIV into the larvae of H. armigera and S. exigua. In H. armigera, when injected with washed eggs alone, only 9.5% of the mature eggs were encapsulated at 24h post-injection. This is much lower than that of the immature eggs (100%), mature eggs pretreated with protease K (100%) and newly laid eggs (54.4%). No encapsulation was observed when the washed eggs were co-injected with calyx fluid at 24h post-injection. Conversely, the eggs in all treatments were encapsulated in S. exigua. Electron microscopic observations of parasitoid eggs showed structural differences between the surfaces of the mature and other kinds of eggs. The injected CcIV decreased the numbers of host hemocytes and suppressed the spreading ability of plasmatocytes and granulocytes in H. armigera, but had little effect on the hemocytes from S. exigua. In conclusion, the C. chlorideae egg provides a passive protection against encapsulation by itself, and CcIV supplies an active protection through disrupting host immune responses. These coordinated protections are host-specific, implying their role in host range determination. Copyright © 2015 Elsevier Inc. All rights reserved.

RNA editing enzyme ADAR2 is a mediator of neuropathic pain after peripheral nerve injury.

PubMed

Uchida, Hitoshi; Matsumura, Shinji; Okada, Shunpei; Suzuki, Tsutomu; Minami, Toshiaki; Ito, Seiji

2017-05-01

Transcriptional and post-translational regulations are important in peripheral nerve injury-induced neuropathic pain, but little is known about the role of post-transcriptional modification. Our objective was to determine the possible effect of adenosine deaminase acting on RNA (ADAR) enzymes, which catalyze post-transcriptional RNA editing, in tactile allodynia, a hallmark of neuropathic pain. Seven days after L5 spinal nerve transection (SNT) in adult mice, we found an increase in ADAR2 expression and a decrease in ADAR3 expression in the injured, but not in the uninjured, dorsal root ganglions (DRGs). These changes were accompanied by elevated levels of editing at the D site of the serotonin (5-hydroxytryptamine) 2C receptor (5-HT 2C R), at the I/V site of coatomer protein complex subunit α (COPA), and at the R/G site of AMPA receptor subunit GluA2 in the injured DRG. Compared to Adar2 +/+ /Gria2 R/R littermate controls, Adar2 -/- /Gria2 R/R mice completely lacked the increased editing of 5-HT 2C R, COPA, and GluA2 transcripts in the injured DRG and showed attenuated tactile allodynia after SNT. Furthermore, the antidepressant fluoxetine inhibited neuropathic allodynia after injury and reduced the COPA I/V site editing in the injured DRG. These findings suggest that ADAR2 is a mediator of injury-induced tactile allodynia and thus a potential therapeutic target for the treatment of neuropathic pain.-Uchida, H., Matsumura, S., Okada, S., Suzuki, T., Minami, T., Ito, S. RNA editing enzyme ADAR2 is a mediator of neuropathic pain after peripheral nerve injury. © FASEB.

A sulforaphane analogue that potently activates the Nrf2-dependent detoxification pathway.

PubMed

Morimitsu, Yasujiro; Nakagawa, Yoko; Hayashi, Kazuhiro; Fujii, Hiroyuki; Kumagai, Takeshi; Nakamura, Yoshimasa; Osawa, Toshihiko; Horio, Fumihiko; Itoh, Ken; Iida, Katsuyuki; Yamamoto, Masayuki; Uchida, Koji

2002-02-01

Exposure of cells to a wide variety of chemoprotective compounds confers resistance to a broad set of carcinogens. For a subset of the chemoprotective compounds, protection is generated by an increase in the abundance of the protective phase II detoxification enzymes, such as glutathione S-transferase (GST). We have recently developed a cell culture system, using rat liver epithelial RL 34 cells, that potently responds to the phenolic antioxidants resulting in the induction of GST activity (Kawamoto, Y., Nakamura, Y., Naito, Y., Torii, Y., Kumagai, T., Osawa, T., Ohigashi, H., Satoh, K., Imagawa, M., and Uchida, K. (2000) J. Biol. Chem. 275, 11291-11299.) In the present study, we investigated the phase II-inducing potency of an isothiocyanate compound in vitro and in vivo and examined a possible induction mechanism. Based on an extensive screening of vegetable extracts for GST inducer activity in RL34 cells, we found Japanese horseradish, wasabi (Wasabia japonica, syn. Eutrema wasabi), as the richest source and identified 6-methylsulfinylhexyl isothiocyanate (6-HITC), an analogue of sulforaphane (4-methylsulfinylbutyl isothiocyanate) isolated from broccoli, as the major GST inducer in wasabi. 6-HITC potently induced both class alpha GSTA1 and class pi GSTP1 isozymes in RL34 cells. In animal experiments, we found that 6-MSHI was rapidly absorbed into the body and induced hepatic phase II detoxification enzymes more potently than sulforaphane. The observations that (i) 6-HITC activated the antioxidant response element (ARE), (ii) 6-HITC induced nuclear localization of the transcription factor Nrf2 that binds to ARE, and (iii) the induction of phase II enzyme genes by 6-HITC was completely abrogated in the nrf2-deficient mice, suggest that 6-HITC is a potential activator of the Nrf2/ARE-dependent detoxification pathway.

Source parameters and rupture velocities of microearthquakes in western Nagano, Japan, determined using stopping phases

USGS Publications Warehouse

Imanishi, K.; Takeo, M.; Ellsworth, W.L.; Ito, H.; Matsuzawa, T.; Kuwahara, Y.; Iio, Y.; Horiuchi, S.; Ohmi, S.

2004-01-01

We use an inversion method based on stopping phases (Imanishi and Takeo, 2002) to estimate the source dimension, ellipticity, and rupture velocity of microearthquakes and investigate the scaling relationships between source parameters. We studied 25 earthquakes, ranging in size from M 1.3 to M 2.7, that occurred between May and August 1999 at the western Nagano prefecture, Japan, which is characterized by a high rate of shallow earthquakes. The data consist of seismograms recorded in an 800-m borehole and at 46 surface and 2 shallow borehole seismic stations whose spacing is a few kilometers. These data were recorded with a sampling frequency of 10 kHz. In particular, the 800-m-borehole data provide a wide frequency bandwidth with greatly reduced ground noise and coda wave amplitudes compared with surface recordings. High-frequency stopping phases appear in the body waves in Hilbert transform pairs and are readily detected on seismograms recorded in the 800-m borehole. After correcting both borehole and surface data for attenuation, we also measure the rise time, which is defined as the interval from the arrival time of the direct wave to the timing of the maximum amplitude in the displacement pulse. The differential time of the stopping phases and the rise times were used to obtain source parameters. We found that several microearthquakes propagated unilaterally, suggesting that all microearthquakes cannot be modeled as a simple circular crack model. Static stress drops range from approximately 0.1 to 2 MPa and do not vary with seismic moment. It seems that the breakdown in stress drop scaling seen in previous studies using surface data is simply an artifact of attenuation in the crust. The average value of rupture velocity does not depend on earthquake size and is similar to those reported for moderate and large earthquakes. It is likely that earthquakes are self-similar over a wide range of earthquake size and that the dynamics of small and large earthquakes are similar.

Observation and prediction of dynamic ground strains, tilts, and torsions caused by the Mw 6.0 2004 Parkfield, California, earthquake and aftershocks, derived from UPSAR array observations

USGS Publications Warehouse

Spudich, P.; Fletcher, Joe B.

2008-01-01

The 28 September 2004 Parkfield, California, earthquake (Mw 6.0) and four aftershocks (Mw 4.7-5.1) were recorded on 12 accelerograph stations of the U.S. Geological Survey Parkfield seismic array (UPSAR), an array of three-component accelerographs occupying an area of about 1 km2 located 8.8 km from the San Andreas fault. Peak horizontal acceleration and velocity at UPSAR during the mainshock were 0.45g and 27 cm/sec, respectively. We determined both time-varying and peak values of ground dilatations, shear strains, torsions, tilts, torsion rates, and tilt rates by applying a time-dependent geodetic analysis to the observed array displacement time series. Array-derived dilatations agree fairly well with point measurements made on high sample rate recordings of the Parkfield-area dilatometers (Johnston et al., 2006). Torsion Fourier amplitude spectra agree well with ground velocity spectra, as expected for propagating plane waves. A simple predictive relation, using the predicted peak velocity from the Boore-Atkinson ground-motion prediction relation (Boore and Atkinson, 2007) scaled by a phase velocity of 1 km/sec, predicts observed peak Parkfield and Chi-Chi rotations (Huang, 2003) well. However, rotation rates measured during Mw 5 Ito, Japan, events observed on a gyro sensor (Takeo, 1998) are factors of 5-60 greater than those predicted by our predictive relation. This discrepancy might be caused by a scale dependence in rotation, with rotations measured over a short baseline exceeding those measured over long baselines. An alternative hypothesis is that events having significant non-double-couple mechanisms, like the Ito events, radiate much stronger rotations than double-couple events. If this is true, then rotational observations might provide an important source of new information for monitoring seismicity in volcanic areas.

Broadband Seismic Studies at the Mallik Gas Hydrate Research Well

NASA Astrophysics Data System (ADS)

Sun, L. F.; Huang, J.; Lyons-Thomas, P.; Qian, W.; Milkereit, B.; Schmitt, D. R.

2005-12-01

The JAPEX/JNOC/GSC et al. Mallik 3L-38, 4L-38 and 5L-38 scientific wells were drilled in the MacKenzie Delta, NWT, Canada in early 2002 primarily for carrying out initial tests of the feasibility of producing methane gas from the large gas hydrate deposits there [1]. As part of this study, high resolution seismic profiles, a pseudo-3D single fold seismic volume and broadband (8~180Hz) multi-offset vertical seismic profiles (VSP) were acquired at the Mallik site. Here, we provide details on the acquisition program, present the results of the 2D field profile, and discuss the potential implications of these observations for the structure of the permafrost and gas hydrate zones. These zones have long been problematic in seismic imaging due to the lateral heterogeneities. Conventional seismic data processing usually assume a stratified, weak-contrast elastic earth model. However, in permafrost and gas hydrate zones this approximation often becomes invalid. This leads to seismic wave scattering caused by multi-scale perturbation of elastic properties. A 3D viscoelastic finite difference modeling algorithm was employed to simulate wave propagation in a medium with strong contrast. Parameters in this modeling analysis are based on the borehole geophysical log data. In addition, an uncorrelated Vibroseis VSP data set was studied to investigate frequency-dependent absorption and velocity dispersion. Our results indicate that scattering and velocity dispersion are important for a better understanding of attenuation mechanisms in heterogeneous permafrost and gas hydrate zones. [1] Dallimore, S.R., Collett, T.S., Uchida, T., and Weber, M., 2005, Overview of the science program for the Mallik 2002 Gas Hydrate Production Research Well Program; in Scientific Results from Mallik 2002 Gas Hydrate production Research Well Program, MacKenzie Delta, Northwest Territories, Canada, (ed.) S.R. Dallimore and T.S. Collett; Geological Survey of Canada, Bulletin 585, in press.

Amino Acid Substitutions in PB1 of Avian Influenza Viruses Influence Pathogenicity and Transmissibility in Chickens

PubMed Central

Suzuki, Yasushi; Uchida, Yuko; Tanikawa, Taichiro; Maeda, Naohiro; Takemae, Nobuhiro

2014-01-01

ABSTRACT Amino acid substitutions were introduced into avian influenza virus PB1 in order to characterize the interaction between polymerase activity and pathogenicity. Previously, we used recombinant viruses containing the hemagglutinin (HA) and neuraminidase (NA) genes from the highly pathogenic avian influenza virus (HPAIV) H5N1 strain and other internal genes from two low-pathogenicity avian influenza viruses isolated from chicken and wild-bird hosts (LP and WB, respectively) to demonstrate that the pathogenicity of highly pathogenic avian influenza viruses (HPAIVs) of subtype H5N1 in chickens is regulated by the PB1 gene (Y. Uchida et al., J. Virol. 86:2686–2695, 2012, doi:http://dx.doi.org/10.1128/JVI.06374-11). In the present study, we introduced a C38Y substitution into WB PB1 and demonstrated that this substitution increased both polymerase activity in DF-1 cells in vitro and the pathogenicity of the recombinant viruses in chickens. The V14A substitution in LP PB1 reduced polymerase activity but did not affect pathogenicity in chickens. Interestingly, the V14A substitution reduced viral shedding and transmissibility. These studies demonstrate that increased polymerase activity correlates directly with enhanced pathogenicity, while decreased polymerase activity does not always correlate with pathogenicity and requires further analysis. IMPORTANCE We identified 2 novel amino acid substitutions in the avian influenza virus PB1 gene that affect the characteristics of highly pathogenic avian influenza viruses (HPAIVs) of the H5N1 subtype, such as viral replication and polymerase activity in vitro and pathogenicity and transmissibly in chickens. An amino acid substitution at residue 38 in PB1 directly affected pathogenicity in chickens and was associated with changes in polymerase activity in vitro. A substitution at residue 14 reduced polymerase activity in vitro, while its effects on pathogenicity and transmissibility depended on the constellation of internal genes. PMID:25031333

The origin of high frequency radiation in earthquakes and the geometry of faulting

NASA Astrophysics Data System (ADS)

Madariaga, R.

2004-12-01

In a seminal paper of 1967 Kei Aki discovered the scaling law of earthquake spectra and showed that, among other things, the high frequency decay was of type omega-squared. This implies that high frequency displacement amplitudes are proportional to a characteristic length of the fault, and radiated energy scales with the cube of the fault dimension, just like seismic moment. Later in the seventies, it was found out that a simple explanation for this frequency dependence of spectra was that high frequencies were generated by stopping phases, waves emitted by changes in speed of the rupture front as it propagates along the fault, but this did not explain the scaling of high frequency waves with fault length. Earthquake energy balance is such that, ignoring attenuation, radiated energy is the change in strain energy minus energy released for overcoming friction. Until recently the latter was considered to be a material property that did not scale with fault size. Yet, in another classical paper Aki and Das estimated in the late 70s that energy release rate also scaled with earthquake size, because earthquakes were often stopped by barriers or changed rupture speed at them. This observation was independently confirmed in the late 90s by Ide and Takeo and Olsen et al who found that energy release rates for Kobe and Landers were in the order of a MJ/m2, implying that Gc necessarily scales with earthquake size, because if this was a material property, small earthquakes would never occur. Using both simple analytical and numerical models developed by Addia-Bedia and Aochi and Madariaga, we examine the consequence of these observations for the scaling of high frequency waves with fault size. We demonstrate using some classical results by Kostrov, Husseiny and Freund that high frequency energy flow measures energy release rate and is generated when ruptures change velocity (both direction and speed) at fault kinks or jogs. Our results explain why super shear ruptures are only observed when faults are relatively flat and smooth, and why complex geometry inhibits fast ruptures.

Geostatistical modelling of soil-transmitted helminth infection in Cambodia: do socioeconomic factors improve predictions?

PubMed

Karagiannis-Voules, Dimitrios-Alexios; Odermatt, Peter; Biedermann, Patricia; Khieu, Virak; Schär, Fabian; Muth, Sinuon; Utzinger, Jürg; Vounatsou, Penelope

2015-01-01

Soil-transmitted helminth infections are intimately connected with poverty. Yet, there is a paucity of using socioeconomic proxies in spatially explicit risk profiling. We compiled household-level socioeconomic data pertaining to sanitation, drinking-water, education and nutrition from readily available Demographic and Health Surveys, Multiple Indicator Cluster Surveys and World Health Surveys for Cambodia and aggregated the data at village level. We conducted a systematic review to identify parasitological surveys and made every effort possible to extract, georeference and upload the data in the open source Global Neglected Tropical Diseases database. Bayesian geostatistical models were employed to spatially align the village-aggregated socioeconomic predictors with the soil-transmitted helminth infection data. The risk of soil-transmitted helminth infection was predicted at a grid of 1×1km covering Cambodia. Additionally, two separate individual-level spatial analyses were carried out, for Takeo and Preah Vihear provinces, to assess and quantify the association between soil-transmitted helminth infection and socioeconomic indicators at an individual level. Overall, we obtained socioeconomic proxies from 1624 locations across the country. Surveys focussing on soil-transmitted helminth infections were extracted from 16 sources reporting data from 238 unique locations. We found that the risk of soil-transmitted helminth infection from 2000 onwards was considerably lower than in surveys conducted earlier. Population-adjusted prevalences for school-aged children from 2000 onwards were 28.7% for hookworm, 1.5% for Ascaris lumbricoides and 0.9% for Trichuris trichiura. Surprisingly, at the country-wide analyses, we did not find any significant association between soil-transmitted helminth infection and village-aggregated socioeconomic proxies. Based also on the individual-level analyses we conclude that socioeconomic proxies might not be good predictors at an aggregated large-scale analysis due to their large between- and within-village heterogeneity. Specific information of both the infection risk and potential predictors might be needed to obtain any existing association. The presented soil-transmitted helminth infection risk estimates for Cambodia can be used for guiding and evaluating control and elimination efforts. Copyright © 2014. Published by Elsevier B.V.

Distribution of stress drop, stiffness, and fracture energy over earthquake rupture zones

USGS Publications Warehouse

Fletcher, Joe B.; McGarr, A.

2006-01-01

Using information provided by slip models and the methodology of McGarr and Fletcher (2002), we map static stress drop, stiffness (k = ????/u, where ???? is static stress drop and u is slip), and fracture energy over the slip surface to investigate the earthquake rupture process and energy budget. For the 1994 M6.7 Northridge, 1992 M7.3 Landers, and 1995 M6.9 Kobe earthquakes, the distributions of static stress drop show strong heterogeneity, emphasizing the importance of asperities in the rupture process. Average values of static stress drop are 17, 11, and 4 Mpa for Northridge, Landers, and Kobe, respectively. These values are substantially higher than estimates based on simple crack models, suggesting that the failure process involves the rupture of asperities within the larger fault zone. Stress drop as a function of depth for the Northridge and Landers earthquakes suggests that stress drops are limited by crustal strength. For these two earthquakes, regions of high slip are surrounded by high values of stiffness. Particularly for the Northridge earthquake, the prominent patch of high slip in the central part of the fault is bordered by a ring of high stiffness and is consistent with expectations based on the failure of an asperity loaded at its edge due to exterior slip. Stiffness within an asperity is inversely related to its dimensions. Estimates of fracture energy, based on static stress drop, slip, and rupture speed, were used to investigate the nature of slip weakening at four locations near the hypocenter of the Kobe earthquake for comparison with independent results based on a dynamic model of this earthquake. One subfault updip and to the NE of the hypocenter has a fracture energy of 1.1 MJ/m2 and a slip-weakening distance, Dc, of 0.66 m. Right triangles, whose base and height are Dc and the dynamic stress drop, respectively, approximately overlie the slip-dependent stress given by Ide and Takeo (1997) for the same locations near the hypocenter. The total fracture energy for the Kobe earthquake, 3.7 ?? 1014 J, is about the same as the seismic energy (Ea = 3.2 ?? 1014 J.

Multi-millennial-scale climate variability in Antarctica during the past seven glacial periods

NASA Astrophysics Data System (ADS)

Kawamura, K.

2009-12-01

Climate variability on 1,000- to 10,000 -year timescales and associated interhemispheric seesaw during the last glacial period have been documented in a variety of paleoclimatic records. However, the frequency, magnitude, cause and prerequisites for the older glacial periods are still uncertain. We here present a new 720,000-year ice core record from Dome Fuji, East Antarctica. The agreement between the Dome Fuji and Dome C isotopic temperature records indicates homogeneous climate variability across the East Antarctic plateau throughout the past 720 kyr. By combining the two temperature proxy records, we identified persistent multi-millennial-scale Antarctic events over the past seven glacial periods. With a fully coupled atmosphere-ocean general circulation model, it is suggested that the prerequisite for the bipolar seesaw is the combination of a cold background climate and freshwater input into the northern North Atlantic. With our identification criteria, the mean repetition period of the large Antarctic events increased from 6 kyr in the older three glacial periods to 8 kyr in the younger four glacial periods. Low frequency variations (repetition period of >10 kyr) occur in the early parts of the last four glacial periods (i.e. after Mid-Brunhes climatic shift), suggesting a role of insolation forcing on the large bipolar events in the recent glacial periods. Dome Fuji Ice Core Project members (listed in alphabetical order): Ayako Abe-Ouchi, Yutaka Ageta, Shuji Aoki, Nobuhiko Azuma, Yoshiyuki Fujii, Koji Fujita, Shuji Fujita, Kotaro Fukui, Teruo Furukawa, Atsushi Furusaki, Kumiko Goto-Azuma, Ralf Greve, Motohiro Hirabayashi, Takeo Hondoh, Akira Hori, Shinichiro Horikawa, Kazuho Horiuchi, Makoto Igarashi, Yoshinori Iizuka, Takao Kameda, Kokichi Kamiyama, Hiroshi Kanda, Kenji Kawamura, Mika Kohno, Takayuki Kuramoto, Yuki Matsushi, Morihiro Miyahara, Takayuki Miyake, Atsushi Miyamoto, Hideaki Motoyama, Yasuo Nagashima, Yoshiki Nakayama, Takakiyo Nakazawa, Fumio Nakazawa, Fumihiko Nishio, Ichio Obinata, Rumi Ohgaito, Akira Oka, Junichi Okuyama, Frédéric Parrenin, Frank Pattyn, Fuyuki Saito, Takashi Saito, Takeshi Saito, Kimikazu Sasa, Yasuyuki Shibata, Kunio Shinbori, Keisuke Suzuki, Toshitaka Suzuki, Akiyoshi Takahashi, Shuhei Takahashi, Tsutomu Takahashi, Morimasa Takata, Michiko Tamari, Yoichi Tanaka, Yuki Tosaki, Ryu Uemura, Genta Watanabe, Okitsugu Watanabe, Tetsuhide Yamasaki, Kotaro Yokoyama, Takayasu Yoshimoto

Frequency-dependent moment release of very low frequency earthquakes in the Cascadia subduction zone

NASA Astrophysics Data System (ADS)

Takeo, A.; Houston, H.

2014-12-01

Episodic tremor and slip (ETS) has been observed in Cascadia subduction zone at two different time scales: tremor at a high-frequency range of 2-8 Hz and slow slip events at a geodetic time-scale of days-months. The intermediate time scale is needed to understand the source spectrum of slow earthquakes. Ghosh et al. (2014, IRIS abs) recently reported the presence of very low frequency earthquakes (VLFEs) in Cascadia. In southwest Japan, VLFEs are usually observed at a period range around 20-50 s, and coincide with tremors (e.g., Ito et al. 2007). In this study, we analyzed VLFEs in and around the Olympic Peninsula to confirm their presence and estimate their moment release. We first detected VLFE events by using broadband seismograms with a band-pass filter of 20-50 s. The preliminary result shows that there are at least 16 VLFE events with moment magnitudes of 3.2-3.7 during the M6.8 2010 ETS. The focal mechanisms are consistent with the thrust earthquakes at the subducting plate interface. To detect signals of VLFEs below noise level, we further stacked long-period waveforms at the peak timings of tremor amplitudes for tremors within a 10-15 km radius by using tremor catalogs in 2006-2010, and estimated the focal mechanisms for each tremor source region as done in southwest Japan (Takeo et al. 2010 GRL). As a result, VLFEs could be detected for almost the entire tremor source region at a period range of 20-50 s with average moment magnitudes in each 5-min tremor window of 2.4-2.8. Although the region is limited, we could also detect VLFEs at a period range of 50-100 s with average moment magnitudes of 3.0-3.2. The moment release at 50-100 s is 4-8 times larger than that at 20-50 s, roughly consistent with an omega-squared spectral model. Further study including tremor, slow slip events and characteristic activities, such as rapid tremor reversal and tremor streaks, will reveal the source spectrum of slow earthquakes in a broader time scale from 0.1 s to days.

Recovering the Full Afterslip Following the 2012 Mw 7.6 Nicoya, Costa Rica Earthquake

NASA Astrophysics Data System (ADS)

Hobbs, T. E.; Kyriakopoulos, C.; Newman, A. V.; Yao, D.; Dixon, T. H.; Protti, M.

2016-12-01

The nearfield deformation before, during and after major megathrust events, though they generate destructive earthquake shaking and tsunami waves, has proven difficult to observe due to the prohibitive cost of sea-floor geodesy. The Nicoya Peninsula in Costa Rica, however, is ideal for study as the seismogenic zone sits directly below the peninsula allowing for dense proximal instrumentation (18 continuous and 22 campaign GPS sites). Furthermore, rapid convergence of the Cocos and Caribbean plates results in M≥7 earthquakes approximately every 50-60 years, including the 2012 Mw 7.6 Nicoya event. By combining all available continuous GPS data with 3 postseismic GPS campaigns, we captured postseismic surface deformation on and around the Nicoya Peninsula. The main signal is nearly fault-normal trenchward motion of between 6 and 24 cm amongst 40 stations in the 3.5 years following the earthquake. By mid-2014 this signal diminishes, and by 2016 appears to have reversed. We invert the first 2.5 years to determine corresponding slip on a 3D interface that includes detailed microseismic structure [Kyriakopoulos et al., 2015]. Results show significant and well-resolved up- and downdip afterslip that terminates at the periphery of the 2012 coseismic rupture zone. The updip portion (up to 1.7 m) corresponds to about 1/3 the maximum coseismic slip and may be an important mechanism to address unrelieved interseismic locking [Feng et al., 2012]. Updip slip is concentrated in two patches at 15-25 km depth and correlates well with repeating aftershocks, which represent an independent measurement of continued slip activity in the updip afterslip region. Curiously, the downdip afterslip zone is devoid of repeating aftershocks, warranting further study of the relation between these supposedly linked phenomena [i.e. Uchida & Matsuzawa, 2013]. In coming years we expect to record accelerating landward motion as the subduction zone relocks. We intend to use these measurements to differentiate afterslip from the time-dependent, postseismic, viscous response of the mantle. Understanding nuanced postseismic behavior of the Nicoya peninsula may aid interpretation of more fragmented observations in areas with less dense instrumentation.

Dating of barite and anhydrite in sea-floor hydrothermal deposits in the Okinawa Trough

NASA Astrophysics Data System (ADS)

Taisei, F.; Toyoda, S.; Uchida, A.; Ishibashi, J. I.; Totsuka, S.; Shimada, K.; Nakai, S.

2016-12-01

Dating of submarine hydrothermal activities has been an important issue in the aspect of the ore formation (Urabe, 1995) and biological systems sustained by the chemical species arising from hydrothermal activities (Macdonald et al., 1980). For this purpose, dating methods using radioactive disequilibrium such as U-Th method (e.g. You and Bickle, 1998) for sulfide, 226Ra-210Pb and 228Ra-228Th (e.g. Noguchi et al., 2011), Ra/Ba, and ESR (Electron Spin Resonance) methods for barite (Okumura et al., 2010) have been employed. In this study, firstly, we will report the first successful dating results on anhydrite using 226Ra-210Pb and 228Ra-228Th methods. The anhydrite samples were taken from the Daiyon-Yonaguni knoll field and the Hatoma knoll field and the Iheya North Knoll field of the Okinawa Trough by research cruises operated by JAMSTEC. The anhydrite crystals were physically scratched out of the samples. 226Ra, 228Ra and daughter nuclei were measured in the same samples for the ESR method by the low background gamma ray spectrometry. From the activity ratios, disequilibrium ages were obtained to be about 7.3 years by 226Ra-210Pb method, and to be 0.6-2.5 years by 228Ra-228Th method. Secondly, the ESR ages of barite taken from hydrothermal areas in the Okinawa trough range from 4.1 to 16000 years, filling the age gap of the maximum age, 150 years, of 226Ra-210Pb method and the minimum age, several thousand years of U-Th method, being the most appropriate age range to discuss the evolution of the hydrothermal systems. Interestingly, the 226Ra-210Pb and 228Ra-228Th ages for the same samples are the same or younger than the ESR ages. As for the latter samples, the reason has already been discussed (Uchida et al., 2015) as the deposits had been formed by two or more hydrothermal events. In the present paper, the disequilibrium and ESR ages will be simulated with these multiple hydrothermal events so that the differences in the ages are explained.

Selenium extraction: development on extraction chromatographic resins compatible with Diffusive Gradient in Thin film (DGT)

NASA Astrophysics Data System (ADS)

Rad, S.; Dirks-Fandrei, C.; Happel, S. A.; Bombard, A.; Cary, L.

2016-12-01

Measurement of Selenium is of importance regarding public health as the ratio between beneficial daily intake and toxicity is rather low [1], [2]. Also from the radiological perspective, Se-79 as a long-lived fission nuclide (T1/2=2.8x105y) with high mobility in environment, is of concern regarding waste management and decommissioning [3], [4]. Due to the existence of different oxidation states Selenium has a complex speciation chemistry which makes extraction and separation schemes not straightforward. The aim of this research is to develop extraction methods for Selenium based on extraction chromatographic resins allowing for the extraction of Se(VI), as well as Se(IV), from water samples for later use on DGT (Diffusive Gradients in Thin films) devices. Extraction chromatographic resins have been tested and characterized for Se and other elements. For Se(VI) a commercially available Aliquat 336 based extraction chromatographic resin (TEVA resin[5]) was found to be most suitable, for Se(IV) a newly developed extraction chromatographic resin based on Piazselenol chemistry was found to be most effective, data on the selectivity of this resin will be presented. The extraction of Se(IV) and Se(VI) by these resins was tested on water sampled in Lille City, where a high Se spatial variability has been observed. Concentrations in groundwater can reach 30µg/L as a consequence; most Se-contaminated wells are no longer exploited by the water operators. One of the applications of this development is to be able to measure Se concentrations insitu in contaminated areas including very complex object such as hyporheic zone. [1] Cary L. et al. Applied Geochemistry 48 (2014) 70-82 [2] Chen C. et al. Biological Trace Element Research Vols. 71-72 (1999) 131-138 [3] http://www.irsn.fr/FR/Larecherche/publications-documentation/fiches-radionucleides/Documents/environnement/Selenium_Se79_v2.pdf last access 03/03/2016 [4] Uchida et al. WM2009 Conference, March 1-5, 2009, Phoenix, AZ [5] Horwitz P. et al. Analytica Chimica Acta 310 (1995) 63-78

Strong carbon sink of monsoon tropical seasonal forest in Southern Vietnam

NASA Astrophysics Data System (ADS)

Deshcherevskaya, Olga; Anichkin, Alexandr; Avilov, Vitaly; Duy Dinh, Ba; Luu Do, Phong; Huan Tran, Cong; Kurbatova, Julia

2014-05-01

Comparison between anthropogenic emission of carbon dioxide and atmospheric carbon pool change displays that only half of emitted CO2 remains in air, leaving so-called 'missing sink' of carbon. Terrestrial biosphere and ocean accumulate each about a half of this value (Gifford, 1994). Forest biomes play the decisive role in 'missing sink' because of high primary production flux and large carbon pool. Almost all the sink belongs to boreal forests, because warming and wetting coupled with increasing CO2 concentration and N deposition gives more favorable conditions for boreal ecosystems. On the contrary, tropical climate changes effect on forests is not obvious, probably cause more drought conditions; tropical forests suffer from 1.2 % per year area reduction and disturbance. Whether primary tropical forests act as carbon sink is still unclear. Biomass inventories at 146 forest plots across all the tropics in 1987-1997 revealed low carbon sink in humid forests biomass of 49 (29-66; 95% C.I.) g C m-2 year-1 on average (Malhi, 2010). Estimates for undisturbed African forests are close to global (Ciais et al., 2008). Eddy covariance (EC) observations with weak-turbulence correction in Amazonia reveal near-zero or small negative (i.e. sink) balance (Clark, 2004). Three EC sites in SE Asia primary forests give near-zero balance again (Saigusa et al., 2008; Kosugi et al., 2012). There are two main groups of explanations of moderate tropical carbon sink: (a) recovering of large-disturbance in the past or (b) response to current atmospheric changes: increase of CO2 concentration and/or climate change. So, strong carbon accumulation is not common for primary tropical forests. In this context sink of 402 g C m-2 in 2012 at EC station of Nam Cat Tien (NCT), Southern Vietnam (N 11°27', E 107°24', 134 m a.s.l.) in primary monsoon tropical forest looks questionably. EC instrument set at NCT consists of CSAT3 sonic anemometer and LI-7500A open-path gas analyzer. All the standard EC procedures were applied to the raw 10-Hz data, including time-lag compensation, block average, WPL-correction, planar fit, low- and high-frequency corrections etc. in EddyPro software (LI-COR Inc., USA). Calculated fluxes with bad quality flags (more than 6 of 9) were excluded. Spikes due to rains, instrument malfunction were removed too. Storage of CO2 from the surface to the measurement level which is very significant in tall tropical forest was added to the flux. Then low-turbulence correction was applied with u*-threshold of 0.178 m s-1. After these steps only 43 % of 30-min data of 2012 still presented, so the rate of gaps was 57 % (mainly at night and in rains). Data were gapfilled using on-line tool at the web-site of Max-Plank Institute, Germany and Flux-Analysis Tool, Japan. Different gap-filling procedures (non-linear regressions, look-up tables, model evaluation, artificial gaps-method) as well as u*-threshold shifting from 0 to 0.25 resulted in drift of 2012 net carbon exchange total from -296 to -612 g C m-2 (strong carbon sink still remain). Unfortunately, the situation of more then 50 % of gaps in CO2 flux is usual for tropical EC stations because of frequent calm nights. So, a gap-filling algorithm is extremely important for evaluation of long-term totals. We found for Vietnamese data that even few spikes which were not removed before gap-filling can change all-year total by up to 20-50 g m-2 year-1. Especially 'powerful' are big positive values at night in rare-occurred good turbulence. Possibly these values are physical. But they influence regressions in look-up table method dramatically because amount of data in peak of rainy season in night-time is too small. So, the gap-filling algorithm happened to be very sensitive to spikes. Additionally, striking was the fact that storage of CO2 appeared to be the main factor influencing 1-year totals after gap-filling procedure. Taking storage into account shifted the 2012 sum from +182 to -402 g m-2 year-1, from carbon source to the strong sink. Storage total for all the year was near-zero, but in our case including of storage resulted in gap-filling regression changes with corresponding change in total carbon balance. Probably the only way for proper net carbon balance evaluation for NCT site is chamber-measurements of night respiration of different ecosystem components, as used at Pasoh EC station, Malaysia. Ciais P., Piao S.L., Cadule P., Friedlingstein P., & Chedin A. Variability and recent trends in the African carbon balance. Biogeosciences Discussions, 5(4), 2008. Pp. 3497-3532. Clark D.A. Sources or sinks? The responses of tropical forests to current and future climate and atmospheric composition. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 359(1443), 2004. Pp. 477-491. Gifford, R. M. (1994). The global carbon cycle: a viewpoint on the missing sink. Functional Plant Biology, 21(1), 1-15. Kosugi Y., Takanashi S., Tani M., Ohkubo S., Matsuo N., Itoh M., Noguchi S. & Nik A.R. Effect of inter-annual climate variability on evapotranspiration and canopy CO2 exchange of a tropical rainforest in Peninsular Malaysia. Journal of forest research, 17(3), 2012. Pp. 227-240. Malhi, Y. (2010). The carbon balance of tropical forest regions, 1990-2005. Current Opinion in Environmental Sustainability, 2(4), 237-244. Saigusa, N., Yamamoto, S., Hirata, R., Ohtani, Y., Ide, R., Asanuma, J., ... & Wang, H. (2008). Temporal and spatial variations in the seasonal patterns of CO2 flux in boreal, temperate, and tropical forests in East Asia. Agricultural and forest meteorology, 148(5), 700-713.

Pacific Array of, by and for Global Deep Earth Research

NASA Astrophysics Data System (ADS)

Kawakatsu, H.

2016-12-01

Recent advances in ocean bottom geophysical observations, together with advances in the analysis methodology, have now enabled us to resolve the regional 1-D structure of the entire lithosphere- asthenosphere system (LAS), from the surface to a depth of ˜200km, including seismic anisotropy (azimuthal), with deployments of ˜10-15 BBOBSs & OBEMs each for a year or so (Takeo et al, 2013, 2016; Baba et al., 2013; Lin et al. 2016). Thus the in-situ characterization of the physical properties of the entire oceanic LAS without a priori assumption for the shallow-most structure, the assumption often made for global studies, has become possible. We are now entering a new stage that a large scale array experiment in the ocean (e.g., Pacific Array: http://gachon.eri.u-tokyo.ac.jp/ hitosi/PArray/) has become approachable: having 10-15 BBOBSs as an array unit for a 1-2-year deployment, and repeating such deployments in a leap-frog way or concurrently (an array of arrays) for a decade or so would enable us to cover a large portion of the Pacific basin. Such array observations not only by giving regional constraints on the 1-D structure (including seismic anisotropy), but also by sharing waveform data for global scale waveform tomography (e.g., Fichtner et al. 2010; French et al. 2013; Zhu & Tromp 2013), would drastically increase our knowledge of how plate tectonics works beneath oceanic basins, as well as of the large scale picture of the interior of the Earth. For such an array of arrays to be realized, international collaboration seems essential. If three or four countries collaborate together, it may be achieved within a 10-year time frame that makes this concept attractive. It is also essential that global seismology, geodynamics, and deep earth (GSGD) communities work closely with the ocean science community for Pacific Array to be realized, as they would get most benefit from it. While unit array deployments may have their own scientific goals, it is important that they are planned to fit within a larger international Pacific Array structure. The GSGD community should take a lead in providing such an umbrella, as well as stimulating collaborations between different disciplines .

Anatomy of a lava dome using muon radiography and electrical resistivity tomography

NASA Astrophysics Data System (ADS)

Lenat, J.

2011-12-01

For the TOMUVOL Collaboration Previous works (e.g. Tanaka et al., 2008) have demonstrated the capacity of muon radiography techniques to image the internal structure of volcanoes. The method is based on the attenuation of the flux of high energy atmospheric muons through a volcanic edifice, which is measured by a muon telescope installed at some distance from the volcano. The telescope is composed of three parallel matrices of detectors in order to record the angle of incidence of the muons. The aperture of the telescope and its resolution are determined by the distance between the matrices, their surface and their segmentation. TOMUVOL is a project, involving astroparticle and particle physicists and volcanologists, aimed at developing muon tomography of volcanoes. The ultimate goal is to construct autonomous, portable, remote controlled muon telescopes to study and monitor active volcanoes. A first experiment has been carried out on a large, 11000-year-old, trachytic dome, the Puy de Dôme, located in the French Central Massif. The telescope system is derived from particle physics experiments. The sensors are glass resistive plate chambers. The telescope has two 1 m2 and one 1/6 m2 planes. It is located 2 km away from the summit of Puy de Dôme (elevation 1465 m), at 868 m in elevation, Signals have been accumulated during several months. A high resolution LiDAR digital terrain model has been used in computing a density model of the dome, averaged along the path of the muons through the dome. In parallel, an electrical resistivity section of the dome has been obtained using a long (2.2 km) line of electrodes. The internal structure of the dome is thus described with two physical parameters (density and resistivity). This allows us to analyse jointly the results of the two types of measurements. At the time of writing, a new muon radiography campaign is being carried out from a different viewpoint. This is the first step towards a tomographic image of the volcano's internal structure. Reference: Tanaka, H. K. M., T. Nakano, S. Takahashi, J. Yoshida, M. Takeo, J. Oikawa, T. Ohminato, Y. Aoki, E. Koyama, H. Tsuji, H. Ohshima, T. Maekawa, H. Watanabe, and K. Niwa, Radiographic imaging below a volcanic crater floor with cosmic-ray muons, Am. J. Sci., 308, 843-850, 2008.

Characteristics of broadband slow earthquakes explained by a Brownian model

NASA Astrophysics Data System (ADS)

Ide, S.; Takeo, A.

2017-12-01

Brownian slow earthquake (BSE) model (Ide, 2008; 2010) is a stochastic model for the temporal change of seismic moment release by slow earthquakes, which can be considered as a broadband phenomena including tectonic tremors, low frequency earthquakes, and very low frequency (VLF) earthquakes in the seismological frequency range, and slow slip events in geodetic range. Although the concept of broadband slow earthquake may not have been widely accepted, most of recent observations are consistent with this concept. Then, we review the characteristics of slow earthquakes and how they are explained by BSE model. In BSE model, the characteristic size of slow earthquake source is represented by a random variable, changed by a Gaussian fluctuation added at every time step. The model also includes a time constant, which divides the model behavior into short- and long-time regimes. In nature, the time constant corresponds to the spatial limit of tremor/SSE zone. In the long-time regime, the seismic moment rate is constant, which explains the moment-duration scaling law (Ide et al., 2007). For a shorter duration, the moment rate increases with size, as often observed for VLF earthquakes (Ide et al., 2008). The ratio between seismic energy and seismic moment is constant, as shown in Japan, Cascadia, and Mexico (Maury et al., 2017). The moment rate spectrum has a section of -1 slope, limited by two frequencies corresponding to the above time constant and the time increment of the stochastic process. Such broadband spectra have been observed for slow earthquakes near the trench axis (Kaneko et al., 2017). This spectrum also explains why we can obtain VLF signals by stacking broadband seismograms relative to tremor occurrence (e.g., Takeo et al., 2010; Ide and Yabe, 2014). The fluctuation in BSE model can be non-Gaussian, as far as the variance is finite, as supported by the central limit theorem. Recent observations suggest that tremors and LFEs are spatially characteristic, rather than random (Rubin and Armbruster, 2013; Bostock et al., 2015). Since even spatially characteristic source must be activated randomly in time, moment release from these sources are compatible to the fluctuation in BSE model. Therefore, BSE model contains the model of Gomberg et al. (2016), which suggests that the cluster of LFEs makes VLF signals, as a special case.

Statistical analysis of 16-year phase velocity distribution of mesospheric and ionospheric waves in airglow images: Comparison between Rikubetsu and Shigaraki, Japan

NASA Astrophysics Data System (ADS)

Tsuchiya, S.; Shiokawa, K.; Fujinami, H.; Otsuka, Y.; Nakamura, T.; Yamamoto, M.

2017-12-01

A new spectral analysis technique has been developed to obtain power spectra in the horizontal phase velocity by using the 3-D Fast Fourier Transform [Matsuda et al., JGR, 2014]. Takeo et al. (JGR, 2017) studied spectral parameters of atmospheric gravity waves (AGWs) in the mesopause region and medium-scale traveling ionospheric disturbances (MSTIDs) in the thermosphere over 16 years by using airglow images at wavelengths of 557.7 nm (emission altitudes: 90-100 km) and 630.0 nm (200-300 km) obtained at Shigaraki (34.8N, 136.1E), Japan. In this study, we have applied the same spectral analysis technique to the 557.7 nm and 630.0-nm airglow images obtained at Rikubetsu (43.5N, 143.8E), Japan, for 16 years from 1999 to 2014. We compared spectral features of AGWs and MSTIDs over 16 years observed at Shigaraki and Rikubetsu, which are separated by 1,174 km. The propagation direction of mesospheric AGWs seen in 557.7-nm airglow images is northeastward in summer and southwestward in winter at both Shigaraki and Rikubetsu, probably due to wind filtering of these waves by the mesospheric jet. In winter, the propagation direction of AGWs gradually shifted from southwestward to northwestward as time progresses from evening to morning at both stations. We suggest that this local-time shift of propagation direction can also be explained by the wind filtering effect. The propagation direction of AGWs changed from southwestward to northeastward at Rikubetsu on the day of the reversal of eastward zonal wind at 60N and 10 hPa (about 35 km in altitude) by the stratospheric sudden warming (SSW), while such a SSW-associated change was not identified at Shigaraki, indicating that the effect of SSW wind reversal reached only to the Rikubetsu latitudes. For MSTIDs, there is a negative correlation between yearly variation of powers spectral density and F10.7 flux and propagation direction is southwestward in all season at both Shigaraki and Rikubetsu. This negative correlation can be explained by considering the linear growth rate of the Perkins instability which is a cause of the nighttime MSTIDs.

Optimised Combined Angular and Energy Dispersive Diffraction at the PSICHE Beam Line of the SOLEIL Synchrotron for Fast, High Q-range Structure Determination at High Pressure and Temperature.

NASA Astrophysics Data System (ADS)

King, A.; Guignot, N.; Boulard, E.; Deslandes, J. P.; Clark, A. N.; Morard, G.; Itié, J. P.

2017-12-01

Synchrotron diffraction is an ideal technique for investigating materials at high pressure and temperature, because the penetrating nature of high-energy X-rays allows measurements to be made inside pressure cells or sample environments. Wang et al. described the CAESAR acquisition strategy, in which energy and angular dispersive techniques are combined to produce an instrument particularly suitable for quantitative measurements from samples inside high-pressure apparati [1]. The PSICHE beam line of the SOLEIL Synchrotron is equipped with such a CAESAR system. Uniquely, this system allows energy dispersive diffraction spectra to be acquired at scattering angles between -5 and +30 degrees two theta, while maintaining a sphere of confusion at the measurement position in the order of 10 microns. The slits used to define the scattering angle act as Soller slits and select the diffracted volume, separating the sample from its environment. By developing an optimised acquisition strategy we are able to obtain data covering a very wide Q range (to 160nm-1 or more), while minimising the total acquisition time (one hour per complete acquisition). In addition, the 2D nature (angle and energy) of the acquired dataset enables the effective incident spectrum to be efficiently determined with no addition measurements, in order to normalise the acquired data. The resulting profile of scattered intensity as a function of Q is suitable for Fourier transform analysis of liquid or amorphous structures. PSICHE is a multi technique beam line, with a part of the beam time dedicated to parallel beam absorption and phase contrast radiography and tomography [2]. Examples will be given to show how these techniques can be combined with diffraction techniques to greatly enrich studies of materials at extreme conditions. [1] Wang, Y., Uchida, T., Von Dreele, R., Rivers, M. L., Nishiyama, N., Funakoshi, K., Nozawa, A., and Keneko, H., J. Appl. Crystallogr. 37, 947 (2004). [2] King, A., Guignot, N., Zerbino, P., Boulard, E., Desjardins, K., Bourdessoule, M., Leclerq, N., Le, S., Renaud, G., Cerato, M., Bornert, M., Lenoir, N., Delzon, S., Perrillat, J.-P., Legodec, Y., Itié, J.-P. Rev. Sci. Instrum. 87, 093704 (2016).

Activity of Small Repeating Earthquakes along Izu-Bonin and Ryukyu Trenches

NASA Astrophysics Data System (ADS)

Hibino, K.; Matsuzawa, T.; Uchida, N.; Nakamura, W.; Matsushima, T.

2014-12-01

There are several subduction systems near the Japanese islands. The 2011 Mw9.0 Tohoku-oki megathrust earthquake occurred at the NE Japan (Tohoku) subduction zone. We have revealed a complementary relation between the slip areas for huge earthquakes and small repeating earthquakes (REs) in Tohoku. Investigations of REs in these subduction zones and the comparison with Tohoku area are important for revealing generation mechanism of megathrust earthquakes. Our target areas are Izu-Bonin and Ryukyu subduction zones, which appear to generate no large interplate earthquake. To investigate coupling of plate boundary in these regions, we estimated spatial distribution of slip rate by using REs. We use seismograms from the High Sensitivity Seismograph Network (Hi-net), Full Range Seismograph Network of Japan (F-net), and permanent seismic stations of Japan Meteorological Agency (JMA), Tohoku University, University of Tokyo, and Kagoshima University from 8 May 2003 (Izu-Bonin) and 14 July 2005 (Ryukyu) to 31 December 2012 to detect REs along the two trenches, by using similarity of seismograms. We mainly follow the procedure adopted in Uchida and Matsuzawa (2013) that studied REs in Tohoku area to compare our results with the REs in Tohoku. We find that the RE distribution along the Ryukyu trench shows two bands parallel to the trench axis. This feature is similar to the pattern in Tohoku where relatively large earthquakes occur between the bands. Along the Izu-Bonin trench, on the other hand, we find much fewer REs than in Tohoku or Ryukyu subduction zones and only one along-trench RE band, which corresponds to the area where the subducting Pacific plate contacts with the crust of the Philippine Sea plate. We also estimate average slip rate and coupling coefficient by using an empirical relationship between seismic moment and slip for REs (Nadeau and Johnson, 1998) and relative plate motion model. As a result, we find interplate slip rate in the deeper band is higher than shallower one along the Ryukyu trench suggesting larger locking along the shallower band. This feature is also similar to the pattern in the NE Japan. Our results indicate that the Ryukyu subduction zone is very similar to the NE Japan subduction zone, while the Izu-Bonin subduction zone appears to be different from the other two zones according to the RE analyses.

Fracture structures of active Nojima fault, Japan, revealed by borehole televiewer imaging

NASA Astrophysics Data System (ADS)

Nishiwaki, T.; Lin, A.

2017-12-01

Most large intraplate earthquakes occur as slip on mature active faults, any investigation of the seismic faulting process and assessment of seismic hazards require an understanding of the nature of active fault damage zones as seismogenic source. In this study, we focus on the fracture structures of the Nojima Fault (NF) that triggered the 1995 Kobe Mw 7.2 earthquake using ultrasonic borehole televiewer (BHTV) images from a borehole wall. The borehole used in this study was drilled throughout the NF at 1000 m in depth by a science project of Drilling into Fault Damage Zone(DFDZ) in 2016 (Lin, 2016; Miyawaki et al., 2016). In the depth of <230 m of the borehole, the rocks are composed of weak consolidated sandstone and conglomerate of the Plio-Pleistocene Osaka-Group and mudstone and sandstone of the Miocene Kobe Group. The basement rock in the depth of >230 m consist of pre-Neogene granitic rock. Based on the observations of cores and analysis of the BHTV images, the main fault plane was identified at a depth of 529.3 m with a 15 cm thick fault gouge zone and a damage zone of 100 m wide developed in the both sides of the main fault plane. Analysis of the BHTV images shows that the fractures are concentrated in two groups: N45°E (Group-1), parallel to the general trend of the NF, and another strikes N70°E (Group-2), oblique to the fault with an angle of 20°. It is well known that Riedel shear structures are common within strike-slip fault zones. Previous studies show that the NF is a right-lateral strike-slip fault with a minor thrust component, and that the fault damage zone is characterized by Riedel shear structures dominated by Y shears (main faults), R shears and P foliations (Lin, 2001). We interpret that the fractures of Group (1) correspond to Y Riedel fault shears, and those of Group (2) are R shears. Such Riedel shear structures indicate that the NF is a right-lateral strike-slip fault which is activated under a regional stress field oriented to the direction close to east-west, coincident with that inferred from geophysical observations (Tsukahara et al., 2001), seismic inversion results (Katao, 1997) and geological structures (Lin, 2001).Katao et al., 1997. J. Phys. Earth, 45, 105.Lin, 2016. AGU, Fall Meeting.Lin, 2001. J. Struc. Geo., 23, 1167.Miyawaki and Uchida, 2016. AGU, Fall Meeting.Tsukahara et al., 2001. Isl. Arc, 10, 261.

Movement of Water Through the Chalk Unsaturated zone

NASA Astrophysics Data System (ADS)

Butler, A.; Ireson, A.; Wheater, H.; Mathias, S.; Finch, J.

2006-12-01

Despite many decades study, quantification of water movement through the Chalk unsaturated zone has proved difficult, due to its particular properties. Chalk comprises a fine grained porous matrix intersected by a fracture network. In much of the unsaturated zone, for most of the time, matric potentials remain between -20 and -0.5 m. Thus the matrix is largely saturated by capillary action, and the fractures are largely de-watered. Therefore, debate has often focussed on the importance of the fractures, as compared with the matrix, for the movement of water. Recently, Mathias et al. (J Hydrol., in press) and Brouyère (J Contam Hydrol,82:195-219,2006) have (independently) proposed an Equivalent Continuum Model, ECM, for the Chalk. This assumes that the fractures can be treated as a porous medium and that the fracture and matrix domains can be treated as a single domain i.e. an equivalent continuum. This requires that the fractures and matrix are in pressure equilibrium, and whilst the theoretical basis for this assumption is reasonable, it has not been demonstrated empirically. In addition, Mathias et al. have demonstrated the importance of rainfall attenuation in the near surface weathered and soil zones of the Chalk for attenuating flow. As part of a national research initiative into groundwater dominated catchments, an extensive field monitoring programme has been implemented at two Chalk catchments in Berkshire (UK). This includes comprehensive soil moisture measurements (water content and matric potential), an extensive network of piezometers and observation wells measuring water table response, and the direct measurement of actual evaporation as well as standard meteorological variables, including rainfall. Using the Kosugi (WRR,32:2697-2703,1996) relationships for soil water retention and hydraulic conductivity a methodology for characterising vertical variation in hydraulic properties from competent chalk at depth through weathered rock to surface soil has been developed using data from one of the above catchments. The model was defined by nine parameters, five of which were identified a priori from observed soil moisture characteristic curves at various elevations, the remaining four by calibration of the numerical model to detailed time series datasets. Effects of parameter identifiability were explored using Monte Carlo analysis. Using a performance criterion based on fitting to matric potentials at a range of depths (from 20 cm to 4 m) over a calendar year, the set of acceptable results appears to support the ECM representation and indicates that fractures in the near- surface competent and weathered rock play an important role in the storage and release of groundwater recharge, whereas the rock matrix is crucial for its transmission to a water table tens of metres below. This conclusion has helped to resolve the debate on the respective roles of fractures and matrix in unsaturated water movement in the Chalk. Furthermore, the model simulations indicate that groundwater recharge can occur continually throughout the year. This helps to explain the apparently enhanced groundwater yields calculated during drought conditions compared with results obtained from pumping tests. It also indicates that current recharge models for the Chalk may need to be revised.

Apportioning carbon sources of authigenic carbonate of extremely 13C-depleted foraminifera from the western North Pacific sediments: Implication from the coupled 13C and 14C isotopic mass balance approach

NASA Astrophysics Data System (ADS)

Uchida, M.; Ohkushi, K.; Ahagon, N.; Kimoto, K.; Inagaki, F.; Shibata, Y.

2005-12-01

Recently, Uchida et al. (G-cubed, 2004) and Ohkushi et al. (G-cubed, 2005) interprete /delta 13C variations of planktonic and benthic foraminifera found in Last Glacial sediments in off Shimokita Peninsula and Tokachi as evidence for periodic releases of methane, arising from the dissociation of methane hydrate, and its subsequent oxidation in bottom- and/or surface-water environments. According to recent observations of anomalous bottom-simulating reflections, northwest Pacific marginal sediments around Japan main islands bear large abundances of methane hydrate. In this study, analyzed piston cores (42° 21.42' N, 144° 13.36' E) at a water depth 1066-m was retrieved from the off Tokachi continental slope in the Oyashio current region, where recently is found to bear immense amounts of methane hydrate. The piston core covered past 22 ka with high-resolution. Here we showed that carbon isotope signals indicated that planktonic and benthic foraminifera in several glacial sediment layers in the core were highly depleted in13 C; both the planktonic and benthic foraminiferal /delta 13C values ranged from about -10/permil to -2/permil. Most foraminiferal tests in these horizons were brown as a result of postdepositional alteration. Foraminiferal oxygen isotopes fluctuated abnormally in the glacial sediment layers, showing small (about 0.5/permil) positive shifts relative to normal glacial values. We attributed the positive shifts to authigenic carbonate formation in the foraminiferal tests. In order to decipher the relation between foraminifera carbon isotopic signal and methane release from the seafloor, we have apportioned carbon sources (methane from methane hydrate or not) of foraminiferal carbon isotopic anomalies using dual mass balance isotopic model (14C/ 12C and 13C/ 12C). It has been suggested that sulfate-dependent anaerobic methane oxidation (AOM) dominates carbon oxidation and attendant authigenic carbonate precipitation to foraminifera. To this assumption, we have quantified the relative contributions of dissolved carbon dioxide (/SigmaCO/_2) from oxidation of methane in anomaly foraminifera. At the layer of 17,840 years cal. age with planktonic foraminifera of dual isotopic data (/delta 13C: -8.1/permil and /Delta 14C: -847/permil) , relative contribution of carbon from authigenic carbonate was 17 percent of total carbonate and its /delta 13C was -48.1/permil, suggesting indirect records of enhanced incorporation of 13C-depleted CO2 formed by anaerobic methane oxidation process that use 12C-enriched methane as their main source of carbon. Moreover, biomarker and phylogenetic compositions were investigated in the light of the past activity of methanotrophic bacteria in the oxic-anoxic interface in the overlying water column and/or surface sediment. Mg/Ca ratios were also analyzed to evaluate foraminiferal 13C depleted carbonate precipitation in comparison with authigenic carbonate produced in the cold seep environment. In the conference, we discuss about what mechanism contribute to authigenic carbon precipitation in terms with carbon source with 13C-depleted foraminifera.

Direct measurement of the breakdown slip from near-fault strong motion data

NASA Astrophysics Data System (ADS)

Cruz-Atienza, V. M.; Olsen, K. B.; Dalguer, L. A.

2007-12-01

Obtaining reliable estimates of the frictional behaviour on earthquake faults is a fundamental task, particularly the breakdown slip Dc, which has an important role on rupture propagation through the earthquake energy budget. Several studies have attempted to estimate Dc indirectly from kinematical analysis of fault ruptures (e.g., Ide and Takeo, JGR, 1997). However, such estimates are complicated because of both the limited band-width of the observed seismograms used to image the rupture process and the rapid decay of high frequencies with distance from the fault. Mikumo et al. (BSSA, 2003) proposed a method to estimate Dc on the fault plane as the slip at the time of the peak sliprate function (Dc'). Fukuyama and Mikumo (GRL, 2007) proposed to extend this method beyond the fault plane, by estimating Dc as twice the rake-parallel particle displacement at the time of the peak particle velocity. The factor of two arises from an equal amount of opposite displacement on either side of the fault. They concluded that such method allows reliable Dc' estimates with negligible dependence on the perpendicular distance from the fault, and used it to obtain Dc' estimates for the 2000 M6.6 Tottori (0.3 m) and the 2002 M7.9 Denali (2.5 m) earthquakes. The study by Fukuyama and Mikumo was based on simple two-dimensional Green's functions in a homogeneous full space for an anti-plane kinematic crack, and suffers from three fundamental omissions: 1) the free surface and heterogeneous structure, 2) the finiteness of the rupture surface and 3) the dynamic rupture complexity of real 3D earthquakes. Here, we re-examine the methodology proposed by Fukuyama and Mikumo by means of a more realistic approach. We use spontaneous rupture propagation simulated by a recently developed and highly accurate approach, namely the staggered-grid split-node (SGSN) method in a fourth-order staggered- grid finite difference method (Dalguer and Day, JGR, 2007). We assume a vertical strike-slip fault governed by both linear and non-linear slip-weakening friction laws. Our results show that both the free surface and the stopping phases strongly affect Dc estimates. The particle motion recorded by surface instruments is amplified roughly by a factor of two due to the presence of the free surface. As a consequence, the method by Fukuyama and Mikumo over-estimates Dc when applied to strong motion data recorded on the earth's surface. Moreover, contrary to the results by Fukuyama and Mikumo, we observe a strong distance-dependence of the Dc estimates perpendicular to the fault. This variation includes a minimum near the fault, increasing up to about 140% of the target Dc value at a distance 2-3 km from the fault. At further distances from the fault the Dc estimate decreases to about 60% of the target value 10 km away. This distance dependence of the Dc estimate is presumably caused mainly by stopping phases propagating from the fault boundaries. Simulations in heterogeneous media including a low-velocity layer, intrinsic attenuation (Q) and stochastic initial stress conditions allow us to asses the reliability and uncertainty involved in the method proposed by Fukuyama and Mikumo. Dc estimates under these realistic conditions are important but remain below a factor of two in most of the cases we have analyzed. In summary, the accuracy of the method is strongly affected by the presence of the free surface, finite fault extent, and likely by complexity in the velocity structure and rupture propagation.

Preface: Introductory Remarks: Linear Scaling Methods

NASA Astrophysics Data System (ADS)

Bowler, D. R.; Fattebert, J.-L.; Gillan, M. J.; Haynes, P. D.; Skylaris, C.-K.

2008-07-01

It has been just over twenty years since the publication of the seminal paper on molecular dynamics with ab initio methods by Car and Parrinello [1], and the contribution of density functional theory (DFT) and the related techniques to physics, chemistry, materials science, earth science and biochemistry has been huge. Nevertheless, significant improvements are still being made to the performance of these standard techniques; recent work suggests that speed improvements of one or even two orders of magnitude are possible [2]. One of the areas where major progress has long been expected is in O(N), or linear scaling, DFT, in which the computer effort is proportional to the number of atoms. Linear scaling DFT methods have been in development for over ten years [3] but we are now in an exciting period where more and more research groups are working on these methods. Naturally there is a strong and continuing effort to improve the efficiency of the methods and to make them more robust. But there is also a growing ambition to apply them to challenging real-life problems. This special issue contains papers submitted following the CECAM Workshop 'Linear-scaling ab initio calculations: applications and future directions', held in Lyon from 3-6 September 2007. A noteworthy feature of the workshop is that it included a significant number of presentations involving real applications of O(N) methods, as well as work to extend O(N) methods into areas of greater accuracy (correlated wavefunction methods, quantum Monte Carlo, TDDFT) and large scale computer architectures. As well as explicitly linear scaling methods, the conference included presentations on techniques designed to accelerate and improve the efficiency of standard (that is non-linear-scaling) methods; this highlights the important question of crossover—that is, at what size of system does it become more efficient to use a linear-scaling method? As well as fundamental algorithmic questions, this brings up implementation questions relating to parallelization (particularly with multi-core processors starting to dominate the market) and inherent scaling and basis sets (in both normal and linear scaling codes). For now, the answer seems to lie between 100-1,000 atoms, though this depends on the type of simulation used among other factors. Basis sets are still a problematic question in the area of electronic structure calculations. The linear scaling community has largely split into two camps: those using relatively small basis sets based on local atomic-like functions (where systematic convergence to the full basis set limit is hard to achieve); and those that use necessarily larger basis sets which allow convergence systematically and therefore are the localised equivalent of plane waves. Related to basis sets is the study of Wannier functions, on which some linear scaling methods are based and which give a good point of contact with traditional techniques; they are particularly interesting for modelling unoccupied states with linear scaling methods. There are, of course, as many approaches to linear scaling solution for the density matrix as there are groups in the area, though there are various broad areas: McWeeny-based methods, fragment-based methods, recursion methods, and combinations of these. While many ideas have been in development for several years, there are still improvements emerging, as shown by the rich variety of the talks below. Applications using O(N) DFT methods are now starting to emerge, though they are still clearly not trivial. Once systems to be simulated cross the 10,000 atom barrier, only linear scaling methods can be applied, even with the most efficient standard techniques. One of the most challenging problems remaining, now that ab initio methods can be applied to large systems, is the long timescale problem. Although much of the work presented was concerned with improving the performance of the codes, and applying them to scientificallyimportant problems, there was another important theme: extending functionality. The search for greater accuracy has given an implementation of density functional designed to model van der Waals interactions accurately as well as local correlation, TDDFT and QMC and GW methods which, while not explicitly O(N), take advantage of localisation. All speakers at the workshop were invited to contribute to this issue, but not all were able to do this. Hence it is useful to give a complete list of the talks presented, with the names of the sessions; however, many talks fell within more than one area. This is an exciting time for linear scaling methods, which are already starting to contribute significantly to important scientific problems. Applications to nanostructures and biomolecules A DFT study on the structural stability of Ge 3D nanostructures on Si(001) using CONQUEST Tsuyoshi Miyazaki, D R Bowler, M J Gillan, T Otsuka and T Ohno Large scale electronic structure calculation theory and several applications Takeo Fujiwara and Takeo Hoshi ONETEP:Linear-scaling DFT with plane waves Chris-Kriton Skylaris, Peter D Haynes, Arash A Mostofi, Mike C Payne Maximally-localised Wannier functions as building blocks for large-scale electronic structure calculations Arash A Mostofi and Nicola Marzari A linear scaling three dimensional fragment method for ab initio calculations Lin-Wang Wang, Zhengji Zhao, Juan Meza Peta-scalable reactive Molecular dynamics simulation of mechanochemical processes Aiichiro Nakano, Rajiv K. Kalia, Ken-ichi Nomura, Fuyuki Shimojo and Priya Vashishta Recent developments and applications of the real-space multigrid (RMG) method Jerzy Bernholc, M Hodak, W Lu, and F Ribeiro Energy minimisation functionals and algorithms CONQUEST: A linear scaling DFT Code David R Bowler, Tsuyoshi Miyazaki, Antonio Torralba, Veronika Brazdova, Milica Todorovic, Takao Otsuka and Mike Gillan Kernel optimisation and the physical significance of optimised local orbitals in the ONETEP code Peter Haynes, Chris-Kriton Skylaris, Arash Mostofi and Mike Payne A miscellaneous overview of SIESTA algorithms Jose M Soler Wavelets as a basis set for electronic structure calculations and electrostatic problems Stefan Goedecker Wavelets as a basis set for linear scaling electronic structure calculationsMark Rayson O(N) Krylov subspace method for large-scale ab initio electronic structure calculations Taisuke Ozaki Linear scaling calculations with the divide-and-conquer approach and with non-orthogonal localized orbitals Weitao Yang Toward efficient wavefunction based linear scaling energy minimization Valery Weber Accurate O(N) first-principles DFT calculations using finite differences and confined orbitals Jean-Luc Fattebert Linear-scaling methods in dynamics simulations or beyond DFT and ground state properties An O(N) time-domain algorithm for TDDFT Guan Hua Chen Local correlation theory and electronic delocalization Joseph Subotnik Ab initio molecular dynamics with linear scaling: foundations and applications Eiji Tsuchida Towards a linear scaling Car-Parrinello-like approach to Born-Oppenheimer molecular dynamics Thomas Kühne, Michele Ceriotti, Matthias Krack and Michele Parrinello Partial linear scaling for quantum Monte Carlo calculations on condensed matter Mike Gillan Exact embedding of local defects in crystals using maximally localized Wannier functions Eric Cancès Faster GW calculations in larger model structures using ultralocalized nonorthogonal Wannier functions Paolo Umari Other approaches for linear-scaling, including methods formetals Partition-of-unity finite element method for large, accurate electronic-structure calculations of metals John E Pask and Natarajan Sukumar Semiclassical approach to density functional theory Kieron Burke Ab initio transport calculations in defected carbon nanotubes using O(N) techniques Blanca Biel, F J Garcia-Vidal, A Rubio and F Flores Large-scale calculations with the tight-binding (screened) KKR method Rudolf Zeller Acknowledgments We gratefully acknowledge funding for the workshop from the UK CCP9 network, CECAM and the ESF through the PsiK network. DRB, PDH and CKS are funded by the Royal Society. References [1] Car R and Parrinello M 1985 Phys. Rev. Lett. 55 2471 [2] Kühne T D, Krack M, Mohamed F R and Parrinello M 2007 Phys. Rev. Lett. 98 066401 [3] Goedecker S 1999 Rev. Mod. Phys. 71 1085

Measuring ecosystem functioning of soil mega-aggregates produced by soil/litter mix-feeding animals

NASA Astrophysics Data System (ADS)

Kaneko, N.

2009-04-01

Some soil animals are soil/litter mix-feeders. They are known to produce long-lasting soil structures (e.g. casts and molting chamber), and these structures will modify resource availability and environmental conditions for plants and soil organisms. Good examples are epigeic Megascolecid earthworms (Uchida et al., 2004) and Xystodesmid millipeds (Toyota et al., 2006), both found in Japan. In this study we examined chemical, physical and biological properties of soil focusing on multi-functioning of aggregates made by these animals. Since 2003, we manipulated densities of epigeic earthworms in a field encloser (35 m2) (three replications) at a cool temperate forest in Japan. At a no-worm (NW) treatment, all the worms have been collected every year by hand. At the same place, we prepared a control treatment in an encloser (Closed control; CC) and outside the encloser (Open control; OC). We examined surface soil and plant growth after 5-years field manipulation of oak dominated forest. Growth of two Liliaceae forest floor herbs; Smilacina japonica and Polygonatum odoratum, and oak (Quercus crispula) seedlings and canopy oak trees were recorded. Reduction of aggregates after elimination of earthworms was observed in a field condition. The manipulation site showed decreased soil pH, Ca, Mg, and P concentration and total carbon storage was also reduced. There was a negative significant correlation between casts abundance and soil NH4-N, and a positive significance was observed between casts abundance and growth of S. japonica, and oak seedlings. Radial growth of canopy oak trees was decreased at NW treatment compared to CC and OC. Leaf N contents of oak seedling at NW were significantly lower in NW, but canopy oak trees did not show any difference in leaf-N. Although S. japonica and P. odoratum were both found in a same forest floor, S. japonica is known as nutrient limited plants in spring, whereas P. odoratum is light limited. Oak seedlings are depending early growth on their seed nutrient, and the canopy oak trees seem to be nutrient limited. Thus in this forest, the nutrient condition mediated by earthworm activity was a strong factor influencing plant species-specific growth and this correlation was clear when we used the cast abundance as an independent factor but it was not clear when we used the worm abundance or biomass for explanation variables. In laboratory incubations, fresh casts of earthworm Metaphire hilgendorfi contained higher NH4-N which was mostly nitrified within 4-weeks. The 4-weeks aged casts of the earthworm and millipede Parafontaria laminata emitted significantly more N2O whereas the modified soil had strong CH4 acidification capacity. Therefore the animal effects on greenhouse effect gas should be evaluated for CO2, N2O and CH4 at the same time. We then confirmed that megaaggregates, probably cast origin, tended to contain more carbon than fine soil. Combining our data from various study sites in Japan, the amount of carbon contained in megaaggregates (> 2 mm) in 0-5 cm layer ranged from 200 to 1000 g C per m2. Animal feeding activities maintained substantial amount of surface soil aggregates. Therefore, the activity of soil/litter mix feeders can be linked to the carbon dynamics by evaluating worm's soil engineering effect.

PREFACE: Tenth International Conference on Topics in Astroparticle and Underground Physics (TAUP2007)

NASA Astrophysics Data System (ADS)

Inoue, Kunio; Suzuki, Atsuto; Mitsui, Tadao

2008-07-01

The tenth meeting of the TAUP Workshop Series, TAUP 2007, was organized by the Research Center for Neutrino Science, Tohoku University. In TAUP 2007 all the various aspects of Astroparticle Physics have been covered, from Cosmology and Dark Constituents, to Gravitational Waves, to Neutrino Physics and Astrophysics, to High Energy Astrophysics, to Cosmic Rays and Gamma-Rays Astronomy. New and important scientific results were presented and debated in the plenary review talks and in a very large number of contributions in topical parallel sessions. As editors of these proceedings, we hope that this volume, which contains most of the talks and contributions presented at TAUP 2007, will provide a detailed state-of-the-art account of the various facets of Astroparticle Physics. We thank all the invited speakers, conveners, and contributors who made this possible. Full coverage of the transparencies presented at the conference can be found on the website http://www.awa.tohoku.ac.jp/taup2007. The TAUP 2007 Organizing Committee thanks IUPAP/PaNAGIC, Sendai Tourism and Convention Bureau, COE program: Exploring New Science by Bridging Particle-Matter Hierarchy, SEIKO EG&G, and REPIC corporation for sponsoring the Conference, and Sendai Civic Auditorium, where the meeting was held, for their hospitality. We wish to thank Alessandro Bottino, Junpei Shirai, Fumihiko Suekane, David Sinclair, Takaaki Kajita, Takeo Moroi, Masaki Mori, Masahiro Kawasaki, Yoshihito Gando, Sei Yoshida, Kyoko Tamae, Sanshiro Enomoto, Alexandre Kozlov, Yasuhiro Kishimoto, Itaru Shimizu, Kengo Nakamura, Haruo Ikeda, and Kyo Nakajima for their invaluable contribution in the scientific shaping of the conference and in the preparation of the present volume. The Organizing Committee is grateful to the members of the International Advisory Committee and of the TAUP Steering Committee for assistance and advice on the scientific program. Very special thanks are due to Ms Rika Bizen, Mr Fujio Miura, Ms Akemi Otsuka, and Ms Yuri Endo, our workshop secretaries, for their continuous and excellent work in the organization of the conference, and to Ms Chiyo Itoh, and Ms Machiko Mizutani, for their invaluable assistance during the conference. We also gratefully thank the technical staff: Tomoaki Takayama, Hiromitsu Hanada, Takashi Nakajima, for their invaluable help. As announced at the end of the conference, TAUP 2009 will be held in Gran Sasso, Italy, hosted by the Istituto Nazionale di Fisica Nucleare (INFN) with the chair of Professor Eugenio Coccia. Kunio Inoue, Atsuto Suzuki and Tadao Mitsui COMMITTEES TAUP Steering Committee F T Avignone U South Carolina B C Barish CALTECH E Bellotti U Milano/INFN J Bernabéu U Valencia A Bottino (chair) U Torino/INFN V de Alfaro U Torino/INFN T Kajita ICRR U Tokyo C W Kim Johns Hopkins Univ /KIAS E Lorenz U München V Matveev INR Moskow J Morales U Zaragoza D Sinclair U Carleton M Spiro IN2P3 TAUP 2007 International Advisory Committee J J Aubert CNRS Marseille M Baldo-Ceolin U Padova/INFN V Berezinsky INFN-LNGS/INR L Bergström U Stockholm R Bernabei U Roma Tor Vergata/INFN A Bettini U Padova/INFN S Bilenky JINR Dubna D O Caldwell U C Santa Barbara E Coccia INFN-LNGS/U Roma Tor Vergata J Cronin U Chicago A Dar Technion Haifa G Domogatsky INR Moscow H Ejiri U Osaka J Ellis CERN E Fernández IFAE Barcelona E Fiorini U Milano/INFN G Fogli U Bari/INFN T Gaisser U Delaware G Gelmini UCLA G Gerbier CEA Saclay F Halzen U Wisconsin W Haxton U Washington T Kirsten MPI Heidelberg L Maiani U Roma/INFN A McDonald Queen's U K Nakamura KEK E Peterson U Minneapolis R Petronzio INFN/U Roma Tor Vergata G Raffelt MPI München R Rebolo IAC Tenerife L Resvanis U Athens P Salati U Savoie/LAPTH Annecy A Smirnov ICTP Trieste N Spooner U Sheffield S Ting MIT/CERN Y Totsuka U Tokyo M S Turner FNAL/U Chicago J W F Valle IFIC Valencia D Vignaud APC Paris F von Feilitzsch T U München G Zatsepin INR Moscow TAUP 2007 Organizing Committee A Bottino U Torino/INFN D Sinclair U Carleton T Kajita ICRR, U Tokyo A Suzuki (co-chair) KEK/Tohoku U K Inoue (co-chair) RCNS, Tohoku U J Shirai RCNS, Tohoku U F Suekane RCNS, Tohoku U T Mitsui (scientific secretary) RCNS, Tohoku U T Moroi Tohoku U M Mori ICRR, U Tokyo M Kawasaki ICRR, U Tokyo

EDITORIAL: Northern Hemisphere high latitude climate and environmental change

NASA Astrophysics Data System (ADS)

Groisman, Pavel; Soja, Amber

2007-10-01

High Northern Hemisphere latitudes are undergoing rapid and significant change associated with climate warming. Climatic change in this region interacts with and affects the rate of the global change through atmospheric circulation, biogeophysical, and biogeochemical feedbacks. Changes in the surface energy balance, hydrologic cycle, and carbon budget feedback to regional and global weather and climate systems. Two-thirds of the Northern Hemisphere high latitude land mass resides in Northern Eurasia (~20% of the global land mass), and this region has undergone sweeping socio-economic change throughout the 20th century. How this carbon-rich, cold region component of the Earth system functions as a regional entity and interacts with and feeds back to the greater global system is to a large extent unknown. To mitigate the deficiencies in understanding these feedbacks, which may in turn hamper our understanding of the global change rates and patterns, an initiative was formed. Three years ago the Northern Eurasia Earth Science Partnership Initiative (NEESPI) was established to address large-scale and long-term manifestations of climate and environmental change in this region. The NEESPI Science Plan and its Executive Summary have been published at the NEESPI web site (neespi.org). Since 2004, NEESPI participants have been able to seed several waves of research proposals to international and national funding agencies and institutions and also contribute to the International Polar Year. Currently, NEESPI is widely recognized and endorsed by several Earth System Science Partnership (ESSP) programmes and projects: the International Geosphere and Biosphere Programme, the World Climate Research Programme through the Global Energy and Water Cycle Experiment and Climate and Cryosphere Projects, the Global Water System Project, Global Carbon Project, Global Land Project, and the Integrated Land Ecosystem—Atmosphere Processes Study. Through NEESPI, more than 100 individually funded projects (always with international participation) in the United States, Russian Federation, China, European Union, Japan, and Canada have been mutually united to explore the scientifically significant Northern Eurasian region. NEESPI scientists have been quite productive during the past two years (2005 2006) publishing more than 200 books, book chapters, and papers in refereed journals. NEESPI sessions at international conferences are open to everyone who works on environmental and climate change problems in Northern Eurasia and the circumpolar boreal zone. This thematic issue brings together articles from the authors who presented their latest results at the Annual Fall American Geophysical Union Meeting in San Francisco (December 2006). The research letters in this issue are preceded by two editorial papers (Leptoukh et al and Sherstyukov et al) devoted to informational support of research in the NEESPI domain that is critical to the success of the Initiative. The following papers are quite diverse and are assembled into five groups devoted to studies of climate and hydrology, land cover and land use, the biogeochemical cycle and its feedbacks, the cryosphere, and human dimensions in the NEESPI domain and the circumpolar boreal zone. Focus on Northern Hemisphere High Latitude Climate and Environmental Change Contents The articles below represent the first accepted contributions and further additions will appear in the near future. Editorials NASA NEESPI Data and Services Center for Satellite Remote Sensing Information Gregory Leptoukh, Ivan Csiszar, Peter Romanov, Suhung Shen, Tatiana Loboda and Irina Gerasimov NEESPI Science and Data Support Center for Hydrometeorological Information in Obninsk, Russia B G Sherstyukov, V N Razuvaev, O N Bulygina and P Ya Groisman Climate and hydrology Changes in the fabric of the Arctic's greenhouse blanket Jennifer A Francis and Elias Hunter Spatial variations of summer precipitation trends in South Korea, 1973 2005 Heejun Chang and Won-Tae Kwon Land cover and land use Responses of the circumpolar boreal forest to 20th century climate variability Andrea H Lloyd and Andrew G Bunn The biogeochemical cycle and its feedbacks Sphagnum peatland development at their southern climatic range inWest Siberia: trends and peat accumulation patterns Anna Peregon, Masao Uchida and Yasuyuki Shibata Methane emissions from western Siberian wetlands: heterogeneity and sensitivity to climate change T J Bohn, D P Lettenmaier, K Sathulur, L C Bowling, E Podest, K C McDonald and T Friborg The cryosphere Potential feedback of thawing permafrost to the global climate system through methane emission O A Anisimov Glacier changes in the Siberian Altai Mountains, Ob river basin, (1952 2006) estimated with high resolution imagery A B Surazakov, V B Aizen, E M Aizen and S A Nikitin Human dimensions Food and water security in a changing arctic climate Daniel M White, S Craig Gerlach, Philip Loring, Amy C Tidwell and Molly C Chambers

[Preventive measures against tuberculosis in working facilities and companies].

PubMed

Suzuki, Kiminori; Satou, Ken

2007-03-01

The health care program in working facilities and companies have played a significant part in prevention of tuberculosis. However, the ordinary national tuberculosis survey policy was abolished in April, 2005 and the tuberculosis survey for salary-earners is on the brink of drastic change. In this symposium the current status of the prevailing survey of tuberculosis in working facilities and companies was reviewed and the future direction of the tuberculosis survey in comparison to that in lung cancer survey was discussed. 1. Epidemiological trends of tuberculosis from the tuberculosis surveillance data: Masako OHMORI (Research Institute of Tuberculosis, Japan Anti-Tuberculosis Association). The estimated rate of tuberculosis case discovery by periodical mass screening in the working facilities was 0.033% and it was higher than that in general adult population. The detection rate of tuberculosis in nurses who suffered from tuberculosis reached 40.4% by an aid of mass X-ray screening and 8.7% by contact tracing. The risk of onset of the disease was 4.3 times higher nurses than in general at the same years of age. The importance of infection control measures in the medical facilities was emphasized. 2. Current status and problems in tuberculosis control in a large-sized company: Yusuke NAKAOKA (Department of Occupational Health, Osaka Railway Hospital, West Japan Railway Company). Some preventive modalities against TB such as periodical medical check-up and awareness programs have been done for the purpose of prevention in our company. The prevalence of the disease has significantly reduced in number. The specific circumstances in large-sized company should be taken into consideration, and it is important for company workers and health professionals to recognize their roles in preventing the infectious disease. 3. Are there any differences between clinical cases and control people working for small-sized companies in the onset of tuberculosis?: Osamu NAKASHIMA, Kohei IMOTO (Taito Health Center, Tokyo) and Toru MORI (Research Institute of Tuberculosis, JATA). We surveyed environmental conditions in working places and domestic conditions of employees who were working for small-sized companies located in Taito ward, based on written questionnaires. The companies were selected as those which had the patients of tuberculosis in the past one-year period, and the number of employees was less than ten. Compared with control people, TB patients had more frequent smoking habit (p < 0.05), and tended to have been less exposed to the sunshine at their residency and to have nutritionally poor meals and deficits of their meals. These results suggest that these factors alone or in combination may contribute to accelerated onset of tuberculosis. 4. Current status and problems in tuberculosis management among high prevalence population and in health check-up for personnel with unspecified and high occupational contact with tuberculosis patients: Hidetoshi IGARI (Division of Control and Treatment of Infectious Diseases, Chiba University Hospital), Kiminori SUZUKI (Chiba Foundation for Health Promotion and Disease Prevention). Tuberculosis prevalence is as high as 500-1500 per 100,000 peoples among the homeless and construction workers living in "Hanba", a bunkhouse. We surveyed their medical conditions through periodical or extraperiodical health check-up. We retrospectively analyzed some medical factors contributing to successful treatment of the disease. Hospital admission and enhancement of counseling opportunities were two factors leading to the success of the treatment. The ambulance attendants have a significant possibility to contact patients with TB and are high at risk of acquiring the infection. As there are often limited information on TB in patients in an emergency condition, it is difficult to protect themselves from its contagion properly. Periodical and extraperiodical health check-up is important for these personnel and application of QuantiFERON-TB 2nd generation to the personnel is new and useful for diagnosis of the latent tuberculosis infection. 5. A role of chest X-ray examination for lung cancer detection among company workers: Takeo TESHIMA (Koseikan Clinic, Miyagi Branch, Japan Anti-Tuberculosis Association). Detection rates of lung cancer in company workers and in general population under the age of 60 years were compared. Chest X-ray survey was done using 10 cm x 10 cm indirect chest X-ray films of the chest. The detection rates of lung cancer in patients with definite or suspicious diagnosis in 265,620 company workers were 2.3 and 2.6 per 100,000, respectively. On the other hand the rates were 9.9 and 8.8 per 100,000 in a general population of 811,391. Twenty-four percent of patients with suspicious diagnosis were eventually made a definite diagnosis. The corrected detection rate reached to 21.0 for male patients and 8.3 for female patients and 12.1 totally. The detection rates of lung cancer in company workers and in general population under the age of 60 years exceeded the rate of pulmonary tuberculosis. Chest X-ray examination for the detection of lung cancer and pulmonary tuberculosis is still recommended under various working and social circumstances.

EDITORIAL: Invited papers from ISAMMA 2010 (Sendai, Japan, 12-16 July 2010) Invited papers from ISAMMA 2010 (Sendai, Japan, 12-16 July 2010)

NASA Astrophysics Data System (ADS)

Takahashi, M.; Saito, H.

2011-02-01

This cluster issue of Journal of Physics D: Applied Physics contains a collection of papers based on invited talks given at the 2nd International Symposium on Advanced Magnetic Materials and Applications 2010 (ISAMMA 2010) held from 12-16 July 2010 in Sendai, Japan. ISAMMA is the first consolidated symposium of three independent symposia held in the Asian region. ISPMM (International Symposium on Physics of Magnetic Materials) of Japan started in 1987 in Sendai, and was held six times: Beijing (1992), Seoul (1995), Sendai (1998), Taipei (2001) and Singapore (2005). ISAMT (International Symposium of Advanced Magnetic Technology) of Taiwan and SOMMA (International Symposium on Magnetic Materials and Applications) of Korea both began in 1999 and were each held five times up to 2005. ISAMMA was established as a new international symposium which will be held every three years in Asia. The concept of this unified international symposium was mainly led by Professor M Takahashi, Conference Chair of ISAMMA 2010. The first memorial symposium, ISAMMA 2007, was held in Jeju Island, Korea, during the period from 28 May to 1 June 2007. The main purpose and scope of ISAMMA is to provide an opportunity for scientists and engineers from all over the world to meet in Asia to discuss recent advances in the study of magnetic materials and their physics, spin-related phenomena and materials. The categories of ISAMMA 2010 were: fundamental properties of magnetic materials; hard/soft magnetic materials and applications; spintronics materials and devices; structured materials; multi functional magnetic materials; spin dynamics and micromagnetics; magnetic storage; materials for applications (sensors, high-frequency, power, and bio/medical devices); magnetic imaging and characterization. The scientific programme began on Tuesday 13 July 2010 with the opening remark by the Symposium Chairman. The conference was attended by 511 participants from 23 countries, with about 40 per cent from overseas. The programme involved 4 plenary talks, 37 invited talks, 85 contributed talks and 352 posters. All submitted papers were reviewed in order to meet the standards of Journal of Physics D: Applied Physics and Journal of Physics: Conference Series. We are grateful to all participants for their valuable contributions and active discussions. We gratefully acknowledge the financial support of 17 Japanese companies and 7 Japanese foundations. Invited papers from ISAMMA 2010 Contents Current status and recent topics of rare-earth permanent magnets S Sugimoto Alloying effect on the magnetic properties of RFeB-type bulk magnets H W Chang, C C Hsieh, J Y Gan, Y T Cheng, M F Shih and W C Chang Coercivity distributions in Nd-Fe-B sintered magnets produced by the grain boundary diffusion process H Nakamura, K Hirota, T Ohashi and T Minowa Recent progress in high Bs Fe-based nanocrystalline soft magnetic alloys M Ohta and Y Yoshizawa Electric-field effects on magnetic anisotropy in Pd/Fe/Pd(0 0 1) surface Shinya Haraguchi, Masahito Tsujikawa, Junpei Gotou and Tatsuki Oda Gate modulation of spin precession in a semiconductor channel Hyun Cheol Koo, Jae Hyun Kwon, Jonghwa Eom, Joonyeon Chang, Suk Hee Han and Mark Johnson Ferromagnetic resonance of epitaxial Fe nanodots grown on MgO measured using coplanar waveguides M Mizuguchi and K Takanashi Switching phase diagrams of current-induced magnetization switching in asymmetric MgO-based magnetic tunnel junctions Seung-Young Park, Jae-Ho Han, Se-Chung Oh, Jang-Eun Lee, Kyung-Tae Nam, Hyun-Woo Lee, Younghun Jo and Kyung-Jin Lee Temperature dependence of spin-dependent transport properties of Co2MnSi-based current-perpendicular-to-plane magnetoresistive devices Y Sakuraba, K Izumi, S Bosu, K Saito and K Takanashi Adsorbate-induced spin-polarization enhancement of Fe3O4(0 0 1) A Pratt, M Kurahashi, X Sun and Y Yamauchi Antiferromagnetic coupling between spinel ferrite and α-Fe layers in Fe3-δO4/MgO/Fe(0 0 1) epitaxial films Hideto Yanagihara, Yuta Toyoda and Eiji Kita Monte Carlo simulations of the magnetocaloric effect in magnetic Ni-Mn-X (X = Ga, In) Heusler alloys V D Buchelnikov, V V Sokolovskiy, S V Taskaev, V V Khovaylo, A A Aliev, L N Khanov, A B Batdalov, P Entel, H Miki and T Takagi Changes in electronic states and magnetic free energy in La1-zCez(FexSi1-x)13 magnetic refrigerants A Fujita, S Fujieda and K Fukamichi Garnet composite films with Au particles fabricated by repetitive formation for enhancement of Faraday effect H Uchida, Y Mizutani, Y Nakai, A A Fedyanin and M Inoue Control of magnetic domain wall displacement using spin current in small in-plane magnetic field in Permalloy nanowires Yoshihiko Togawa, Takashi Kimura, Ken Harada, Akira Tonomura and Yoshichika Otani Magnetic-field tunable transmittance in a ferrofluid-filled silicon nitride photonic crystal slab H M Lee, L Horng and J C Wu Evaluation of a miniature magnetostrictive actuator using Galfenol under tensile stress Toshiyuki Ueno, Hidemitsu Miura and Sotoshi Yamada Sub-nm resolution depth profiling of the magnetic structure of thin films by the depth-resolved x-ray magnetic circular dichroism technique K Amemiya and M Sakamaki

PREFACE: Selected contributions from the 3rd Theory Meets Industry International Workshop, TMI2009 (Nagoya, Japan, 11-13 November 2009) Selected contributions from the 3rd Theory Meets Industry International Workshop, TMI2009 (Nagoya, Japan, 11-13 November 2009)

NASA Astrophysics Data System (ADS)

Tanaka, Isao; Hafner, Jürgen; Wimmer, Erich; Asahi, Ryoji

2010-09-01

The structures, physicochemical and thermodynamic properties of materials are becoming increasingly amenable to treatment by first-principles (ab initio) quantum mechanical simulations. Calculations containing a few hundred atoms are now routine, thanks to improvements in computer technology and computational techniques. Schemes to determine electronic structures more accurately and to treat more complex systems continue to be developed. A growing number of scientists and engineers are becoming aware of the power of these approaches. By applying these new computational tools, materials science and technology is expected to enter a new era of accelerated progress and efficiency. In 1998 the first workshop entitled 'Theory Meets Industry' (TMI) was held at the Vienna University of Technology. The aim of the workshop was to direct the potential of the ab initio simulation codes developed in academia towards the necessities arising from industrial research. Over the next decade, significant advances in ab initio methodology and its application to academic and industrial research were achieved. It was thus considered timely to hold a second TMI workshop in 2007, again in Vienna. The contributions from academia concentrated on a wide range of new developments in ab initio simulations, as well as on applications at the forefront of materials research. Speakers from the industrial sector also emphasized the progress made in successfully applying ab initiotechniques to key areas of modern technology. The proceedings were published in Journal of Physics: Condensed Matter as a special issue (volume 20, number 6, 2008), which was included in the 'Top papers 2008 showcase' of that journal. Following the notable success of the first two workshops, it was decided that the third TMI workshop would be held outside Europe. Holding the workshop in Japan was intended to increase awareness of theoretical materials science and foster further international collaboration in this field. Lectures and poster presentations were thus solicited from leading international academic and industrial researchers. The large audience that attended responded to the high quality of the talks with pertinent questions and lively discussions. The third workshop, TMI2009, was held over three days from 11-13 November, 2009, at the Nagoya International Center, Nagoya, Japan. Invited talks were given by 23 speakers from 9 countries from both the academic and industry sectors. The speakers were Ryoji Asahi (Toyota Central R&D Labs, Japan), Tomas Bucko (University of Vienna, Austria), Gábor Csányi (University of Cambridge, UK), Alessandro De Vita (King's College London, UK), Bernard Delley (Paul Scherrer Institute, Switzerland), Christophe Domain (EDF, France), George Fitzgerald (Accelrys, USA), Takeo Fujiwara (University of Tokyo, Japan), Jürgen Hafner (University of Vienna, Austria), Masaya Ishida (Sumitomo Chemicals, Japan), Werner Janse Van Rensburg (Sasol Technology, South Africa), Masanori Kohyama (AIST, Japan), Takao Kotani (Tottori University, Japan), Georg Kresse (University of Vienna, Austria), Katsuyuki Matsunaga (Kyoto University, Japan), Stefan Müller (University of Erlangen-Nuremberg, Germany), Shin-ichiro Nakamura (Mitsubishi Chemicals, Japan), Fumiyasu Oba (Kyoto University, Japan), Tamio Oguchi (Hiroshima University, Japan), Pascal Raybaud (IFP, France), Isao Tanaka (Kyoto University/JFCC, Japan), Göran Wahnström (Chalmers University of Technology, Sweden), and Erich Wimmer (Materials Design Inc., USA). There were 40 poster presentations in total. The workshop was attended by approximately 120 participants with approximately 50 per cent from industry. The invited talks covered advances in ab initio solid-state calculations and their practical use in industry. Presentations outlining the progress made in treating large and complex systems, as well as more accurate and efficient calculation methods, were given from the theory side. Examples of the use of ab initiocalculations for research and development of a wide variety of materials were presented from the application side. These included materials for fuel cells, solar cells, lithium batteries, heterogeneous catalysts, oxide semiconductors, bioceramics, light-emitting devices, and many others. It is clear that the gap between theory and application is becoming ever narrower, and collaboration between industry and academia is now de rigueur. Some researchers in industry use ab initio tools every day as part of their research and development activities. The language gap between industry and theory is also narrowing, as shown by the active discussions between presenters and audience. TMI2009 was a satellite meeting of the 2nd International Symposium on Advanced Microscopy and Theoretical Calculations (AMTC2), held from 24-26 June, 2010, in Nagoya, Japan. The AMTC series of meetings was organized to commemorate the establishment of the Nanostructures Research Laboratory (NSRL) at the Japan Fine Ceramics Center (JFCC), and as a daughter event of EXPO 2005 Aichi, Japan. We would like to express our thanks to all the staff of the NSRL who helped run the workshop and contributed immeasurably to its success. Financial support for the workshop from the Grant-in-Aid for Scientific Research on Priority Areas 'Nano Materials Science for Atomic-Scale Modification' from the Ministry of Education, Culture, Sports and Technology (MEXT) and Psi-k Network is also gratefully acknowledged. All submitted papers in this special issue were reviewed in order to meet the high standards of Journal of Physics: Condensed Matter. We are grateful to the many anonymous referees who made this possible. Last but not least, we would also like to thank all invited and poster contributors (especially those who accepted the burden of writing a full paper), and the Institute of Physics for their help in the preparation of this special issue.

A baseline analysis of the distribution, host-range, and severity of the rust Puccinia Psidii in the Hawaiian islands, 2005-2010

USGS Publications Warehouse

Anderson, Robert C.

2012-01-01

Puccinia psidii was first described by Winter (1884) on guava (Psidium guajava L.) in Brazil. The rust is still a major pest of native guava in Brazil and is often referred to as “guava rust” internationally. It is unusual among rust fungi because of its broad and ever-expanding host-range within the Myrtaceae plant family (Simpson et al. 2006). The pathogen is regarded as a major threat to Eucalyptus plantations and other Myrtaceae worldwide (Coutinho et al. 1998, Grgurinovic et al. 2006, Glen et al. 2007). Infections of leaves and meristems are particularly severe on susceptible seedlings, cuttings, young trees, and coppice, causing plants to be stunted and multi-branched, inhibiting normal growth and development, and sometimes causing death to young seedlings (Booth et al. 2000, Rayachhetry et al. 2001). The fungus has expanded its host-range in Brazil, affecting both native and introduced Myrtaceae (Coutinho et al. 1998).

Since its discovery in 1884, P. psidii has continually been discovered to have an expanding host-range within the Myrtaceae, affecting hosts throughout much of South and Central America and the Caribbean. Spreading out originally from Brazil in 1884, the fungus has been reported on hosts in the following countries (first record in parentheses): Paraguay (1884), Uruguay (1889), Ecuador (1891), Colombia (1913), Puerto Rico (1913), Cuba (1926), Dominican Republic (1933), Venezuela (1934), Jamaica (1936), Argentina (1946), Dominica (1948), Trinidad and Tobago (1951), Guatemala (1968), United States (Florida; 1977), Mexico (1981), El Salvador (1987), and Costa Rica (1998) (Simpson et al. 2006). It is possible that P. psidii was present in El Salvador and Costa Rica prior to 1980, but was not reported until 1987 and 1998, respectively.

Until recently, Puccinia psidii was restricted to the Neotropics, Mexico, and the state of Florida in the United States. While the rust has been present in Florida for over 30 years, only recently has it spread westward. Although possibly present earlier, P. psidii was found in California in November 2005 in a nursery in San Diego County on Myrtus communis and documented by a report in a nursery newsletter (Mellano 2006). Puccinia psidii was first found in Hawai`i on a young plant of `ōhi`a (Metrosideros polymorpha) in April 2005, in a nursery on the island of O`ahu (Killgore and Heu 2005; Uchida et al. 2006). The fungus subsequently spread to most islands of the Hawaiian chain, infecting `ōhi`a and other myrtaceous hosts (Hauff 2006, Anderson et al. 2007). P. psidii was first found in Japan in May 2007 on cultivated `ōhi`a (Kawanishi et al. 2009).

Most recently, a rust identified as Uredo rangelii was discovered in April 2010 in New South Wales, Australia (Carnegie et al. 2010). This rust is closely related to Puccinia psidii and is part of the guava rust complex described by Simpson et al. (2006). Although treated as a separate species by Simpson et al. (2006), many authors now consider U. rangelii a synonym for U. psidii, which is the anamorph (asexual stage) of P. psidii, and therefore, the same species (Glen et al. 2007, Carnegie et al. 2010). Because of the large diversity of native Myrtaceae present in Australia, the number of Myrtaceae hosts attacked by species of the guava rust complex will likely grow now that U. rangelii has arrived and is spreading in the country. As of this writing (June 2011), 94 species of Myrtaceae have been identified as hosts of U. rangelii in the states of New South Wales and Queensland. Damage is severe on nearly one-third of the species affected, and 16 of these species are threatened or endangered native species (Secretary of Australia, May 2011).

The presence of Puccinia psidii in Hawai`i is particularly alarming for at least two reasons: (1) M. polymorpha is the dominant overstory tree of the native forest, and (2) P. psidii is now established in the Pacific region, where numerous Myrtaceae species are native. Native ecosystems in Hawai`i and the Pacific could be seriously affected by the spread of P. psidii, as both native and introduced Myrtaceae are significant components of many different plant communities throughout the region (Glen et al. 2007). Because the guava rust complex (i.e., P. psidii and U. rangelii) now attacks well over 100 species of Myrtaceae worldwide, it is currently a priority for international quarantine and import restrictions in an effort to prevent further spread among Australasian and Pacific Myrtaceae.

Several different studies have been done to determine what degree of genetic variation exists between isolates of Puccinia psidii from many different host plants and many different locations (Langrell et al. 2008, Kawanishi et al. 2009, Kadooka 2010, Graça et al. 2011). So far, all of these studies have shown that all of the Hawaiian samples tested so far have had the same genetic composition. Given that the P. psidii strain in Hawai`i has continually been shown for over five years to lack genetic variation at microsatellite marker sites (which are believed to undergo relatively rapid genetic change), a baseline evaluation of incidence and severity should be especially valuable to provide comparisons with future conditions.

Worldwide, 23 Neotropical species in 11 genera and 59 Australasian and Pacific species in 13 genera had been recorded as hosts of Puccinia psidii before 2010 (Simpson et al. 2006, Anderson et al. 2007). Of those 82 species known to be hosts elsewhere, 42 are cultivated or naturalized in Hawai`i. Because of its wide host-range and aggressive pathogenicity, rust disease caused by P. psidii poses a considerable disease threat to many native and cultivated Myrtaceae throughout the world (Coutinho et al. 1998, Booth et al. 2000, Simpson et al. 2006). However, there are few reports comparing the severity of rust infection on native, introduced, and cultivated Myrtaceae (Rayachhetry et al. 2001, Perez et al. 2010). Since government agencies and the public are concerned about the extent of the rust movement within and to Hawai`i (Loope and La Rosa 2008, Loope 2010), there is a need to better understand the incidence, severity, and distribution of P. psidii in Hawai`i. To address that need, this research project was initiated to survey forests, surrounding plant communities, botanical gardens, and commercial nurseries to detect the presence and severity of P. psidii rust infections throughout Hawai`i on plants in the Myrtaceae family. This study provides a baseline on the host distribution and severity to compare current and future impacts of rust infections caused by P. psidii on native, naturalized, and cultivated Myrtaceae in Hawai`i.

EDITORIAL: Ongoing climatic change in Northern Eurasia: justification for expedient research

NASA Astrophysics Data System (ADS)

Groisman, Pavel; Soja, Amber J.

2009-12-01

A brief overview of the ongoing climatic and environmental changes in Northern Eurasia serves as an editorial introduction to this, the second, special Northern Eurasia Earth Science Partnership Initiative (NEESPI) focus issue of Environmental Research Letters. Climatic changes in Northern Eurasia over the last hundred years are reflected in numerous atmospheric and terrestrial variables. Many of these are noticeably significant above the confidence level for 'weather' or other (fire regime, ecosystem change) noise and thus should be further investigated in order to adapt to their impacts. In this focus issue, we introduce assorted studies of different aspects of contemporary change in Northern Eurasia. Most of these have been presented at one of the NEESPI workshops (for more information see neespi.org) and/or American Geophysical Union and European Geosciences Union NEESPI open sessions during the past year. These studies are diverse, representing the diversity of climates and ecosystems across Northern Eurasia. Some of these are focused on smaller spatial scales and/or address only specific aspects of the global change implications across the subcontinent. But the feeling (and observational evidence) that these changes have already been quite rapid and can have global implications inspires us to bring this suite of papers to the readers' attention. See the PDF for the full text of the editorial. Focus on Climatic and Environmental Change in Northern Eurasia Contents Preface Northern Eurasia Earth Science Partnership Initiative Pavel Groisman and Amber J Soja Editorial Siberia integrated regional study: Multidisciplinary investigations of interrelation between Siberia environment dynamics and global climate change E P Gordov and E A Vaganov Studies of the energy and water cycles in Northern Eurasia Comparison and evaluation of gridded radiation products across northern Eurasia T J Troy and E F Wood Reanalysis data underestimate significant changes in growing season weather in Kazakhstan C K Wright, K M de Beurs, Z K Akhmadieva, P Y Groisman and G M Henebry Climate change in Inner Mongolia from 1955 to 2005—trends at regional, biome and local scales N Lu, B Wilske, J Ni, R John and J Chen Application of the Snowmelt Runoff model in the Kuban river basin using MODIS satellite images M V Georgievsky Record Russian river discharge in 2007 and the limits of analysis A I Shiklomanov and R B Lammers Paleoclimatic reconstructions for the south of Valdai Hills (European Russia) as paleo-analogs of possible regional vegetation changes under global warming E Novenko, A Olchev, O Desherevskaya and I Zuganova Diagnosis of the record discharge of Arctic-draining Eurasian rivers in 2007 Michael A Rawlins, Mark C Serreze, Ronny Schroeder, Xiangdong Zhang and Kyle C McDonald Studies of the cryosphere in Northern Eurasia Groundwater storage changes in arctic permafrost watersheds from GRACE and in situ measurements Reginald R Muskett and Vladimir E Romanovsky Changes in snow cover over Northern Eurasia in the last few decades O N Bulygina, V N Razuvaev and N N Korshunova Modeling sub-sea permafrost in the East Siberian Arctic Shelf: the Dmitry Laptev Strait D Nicolsky and N Shakhova Snow cover basal ice layer changes over Northern Eurasia since 1966 Olga N Bulygina, Pavel Ya Groisman, Vyacheslav N Razuvaev and Vladimir F Radionov Snow cover and permafrost evolution in Siberia as simulated by the MGO regional climate model in the 20th and 21st centuries I M Shkolnik, E D Nadyozhina, T V Pavlova, E K Molkentin and A A Semioshina Studies of the biosphere in Northern Eurasia The influence of regional surface soil moisture anomalies on forest fires in Siberia observed from satellites A Bartsch, H Balzter and C George Change and persistence in land surface phenologies of the Don and Dnieper river basins V Kovalskyy and G M Henebry Effects of climatic changes on carbon dioxide and water vapor fluxes in boreal forest ecosystems of European part of Russia A Olchev, E Novenko, O Desherevskaya, K Krasnorutskaya and J Kurbatova The effects of climate, permafrost and fire on vegetation change in Siberia in a changing climate N M Tchebakova, E Parfenova and A J Soja An image-based inventory of the spatial structure of West Siberian wetlands A Peregon, S Maksyutov and Y Yamagata Modeling of the carbon dioxide fluxes in European Russia peat bogs J Kurbatova, C Li, F Tatarinov, A Varlagin, N Shalukhina and A Olchev Feedbacks of windthrow for Norway spruce and Scots pine stands under changing climate O Panferov, C Doering, E Rauch, A Sogachev and B Ahrends Reconstruction and prediction of climate and vegetation change in the Holocene in the Altai-Sayan mountains, Central Asia N M Tchebakova, T A Blyakharchuk and E I Parfenova Simulating the effects of soil organic nitrogen and grazing on arctic tundra vegetation dynamics on the Yamal Peninsula, Russia Qin Yu, Howard Epstein and Donald Walker Possible decline of the carbon sink in the Mongolian Plateau during the 21st century Y Lu, Q Zhuang, G Zhou, A Sirin, J Melillo and D Kicklighter The frequency of forest fires in Scots pine stands of Tuva, Russia G A Ivanova, V A Ivanov, E A Kukavskaya and A J Soja Lateral extension in Sphagnum mires along the southern margin of the boreal region, Western Siberia A Peregon, M Uchida and Y Yamagata Evaluating the sensitivity of Eurasian forest biomass to climate change using a dynamic vegetation model J K Shuman and H H Shugart Studies of socioeconomic processes in Northern Eurasia Comparing patterns of ecosystem service consumption and perceptions of range management between ethnic herders in Inner Mongolia and Mongolia L Zhen, B Ochirbat, Y Lv, Y J Wei, X L Liu, J Q Chen, Z J Yao and F Li Land cover/land use change in semi-arid Inner Mongolia: 1992-2004 Ranjeet John, Jiquan Chen, Nan Lu and Burkhard Wilske Spatial and temporal patterns of greenness on the Yamal Peninsula, Russia: interactions of ecological and social factors affecting the Arctic normalized difference vegetation index D A Walker, M O Leibman, H E Epstein, B C Forbes, U S Bhatt, M K Raynolds, J C Comiso, A A Gubarkov, A V Khomutov, G J Jia, E Kaarlejarvi, J O Kaplan, T Kumpula, P Kuss, G Matyshak, N G Moskalenko, P Orekhov, V E Romanovsky, N G Ukraientseva and Q Yu Methods of surface monitoring from space A bio-optical algorithm for the remote estimation of the chlorophyll-a concentration in case 2 waters Anatoly A Gitelson, Daniela Gurlin, Wesley J Moses and Tadd Barrow Estimation of chlorophyll-a concentration in case II waters using MODIS and MERIS data—successes and challenges W J Moses, A A Gitelson, S Berdnikov and V Povazhnyy Dual scale trend analysis for evaluating climatic and anthropogenic effects on the vegetated land surface in Russia and Kazakhstan K M de Beurs, C K Wright and G M Henebry Satellite microwave remote sensing of North Eurasian inundation dynamics: development of coarse-resolution products and comparison with high-resolution synthetic aperture radar data R Schroeder, M A Rawlins, K C McDonald, E Podest, R Zimmermann and M Kueppers

Japan-China Joint Medical Workshop on Drug Discoveries and Therapeutics 2008: The need of Asian pharmaceutical researchers' cooperation.

PubMed

Nakata, M; Tang, W

2008-10-01

The Japan-China Joint Medical Workshop on Drug Discoveries and Therapeutics 2008 (JCMWDDT 2008) was held from September 29 to October 1, 2008 at The University of Tokyo, Tokyo, Japan. JCMWDDT is an international workshop that is mainly organized by Asian editorial members of Drug Discoveries & Therapeutics (http://www.ddtjournal.com/home) for the purpose of promoting research exchanges in the field of drug discovery and therapeutic. This year's JCMWDDT is the second workshop and focused particularly on novel development and technological innovation of anti-influenza agents. The workshop began with an announcement by the Japanese Co-chairperson, Dr. Sekimizu (Department of Microbiology, Graduate School of Pharmaceutical Sciences, The University of Tokyo, Japan; Editorin- Chief of Drug Discoveries & Therapeutics, DDT) followed by a speech by the Chinese Co-chairperson, Dr. Wenfang Xu (School of Pharmaceutical Sciences, Shandong University, Shandong, China; Editor in China Office of DDT), with additional speeches by Dr. Norio Matsuki (The University of Tokyo, Japan; Editor of DDT) and Dr. Guanhua Du (Chinese Academy of Medical Science, China; Editor of DDT). Fifty-nine titles were presented in 6 specialized sessions (Research Advances in Drug Discoveries and Therapeutics, Drug Synthesis/Clinical Therapeutics, Medicinal Chemistry/Natural Products, Anti-influenza Drugs, Anti-infection/antiviral Drugs, Biochemistry/Molecular Biology /Pharmacology) and a poster session (Drug Discov Ther 2008; 2, Suppl; available at http://www.ddtjournal.com/Announce/index.htm). An annual outbreak of avian influenza in Asian countries including China and Japan has sparked fears that the virus will mutate and then cause an epidemic in humans. Therefore, Asian researchers need to work together to control this infection. This year's JCMWDDT helped provide an opportunity to reiterate the crucial role of medicinal chemistry in conquering influenza and created an environment for cooperative research in Asian countries. (reported on October 1st, with grateful thanks to all participants) Main program Session I. Research Advances in Drug Discoveries and Therapeutics ● Design, synthesis and preliminary activity assay of influenza virus neuraminidase inhibitors by Wenfang Xu (Shandong University, China) ● Infection disease models with silkworms to evaluate the therapeutic effects of drug candidates by Kazuhisa Sekimizu (The University of Tokyo, Japan) ● Japan's governmental approaches to facilitate drug development process by Makoto Shimoaraiso (Ministry of Foreign Affairs of Japan, Japan) ● Effective detection of the epidermal growth factor receptor mutation by the peptide nucleic acid-locked nucleic acid PCR Clamp by Sakuo Hoshi (The University of Tokyo Hospital, Japan) ● Design and synthesis of p53-MDM2 binding inhibitors by Yongzhou Hu (Zhejiang University, China) Session II. Drug Synthesis/Clinical Therapeutics ● Pharmacogenomics-based clinical studies using a novel fully-automated genotyping system by Setsuo Hasegawa (Sekino Clinical Pharmacology Clinic, Japan) ● Synthesis and biological evaluation of pentacyclic triterpenes as anti-tumor agents by Hongbin Sun (China Pharmaceutical University, China) ● Drug discovery and therapeutics using silkworm as experimental animal by Yasuyuki Ogata (The University of Tokyo, Japan) ● Novel selective estrogen recetpor modulators (SERMs) with unusual structure and biological activities by Haibing Zhou (Wuhan University, China) Session III. Medicinal Chemistry/Natural Products ● Synthesis and properties of isonucleosides incorporated oligonucleotides by Zhenjun Yang (Peking University, China) ● Isolation of antiviral compounds from plant resources using silkworm bioassay by Yutaka Orihara (The University of Tokyo, Japan) ● Synthesis and structural modifcation of tasiamide and the effect of these modifications on in vitro anticancer activity by Yingxia Li (Ocean University of China, China) ● Spirohexalines A and B, novel undecaprenyl pyrophosphate inhibitors produced by Penicillium sp. FKI-3368 by Junji Inokoshi (Kitasato University, Japan) ● Nosokomycins, novel anti-MRSA antibiotics, produced by Streptomyces sp. K04-0144 by OR. Uchida (Kitasato University, Japan) ● In vivo screening for antimicrobial activity of Thai Herbal Medicines using silkworm model by Santad Chanprapaph (Chulalongkorn University, Thailand) ● Novel electrochemical sensor of nitric oxide for screening anti-aging Traditional Chinese Medicine by Zilin Chen (Wuhan University, China) ● Polysacchride from green tea purified by silkworm muscle contraction assay induces innate immunity by increasing the expression of various inflammatory cytokine mRNA in human leukocytes by Saphala Dhital (The University of Tokyo, Japan) Session IV. Anti-influenza Drugs ● Structure-activity relationship of flavonoids as influenza virus neuraminidase inhibitors and their in vitro anti-viral activities by Guanhua Du (Chinese Academy of Medical Sciences and Peking Union Medical College, China) ● Mechanisms and consequences of phagocytosis of influenza virus-infected cells by Yoshinobu Nakanishi (Kanazawa University, Japan) ● Nuclear export inhibitors; a possible target for novel anti-influenza viral drugs by Ken Watanabe (Nagasaki University, Japan) ● Catalytic asymmetric synthesis of oseltamivir phosphate directing toward its stable worldwide supply by Motomu Kanai (The University of Tokyo, Japan) ● Clinical effects of probiotic bifidobacterium in the prevention of influenza virus infections and allergic diseases by Jin-zhong Xiao (Morinaga Milk Industry Co., Ltd., Japan) ● Production of anti-influenza PR8-scFv using a phage display by Normaiza Zamri (Tokai University, Japan) Session V. Anti-infection/Antiviral Drugs ● Emerging infectious diseases and anti-viral drugs: Urgent need to develop effective drugs which cause less resistant virus by Nobuyuki Kobayashi (Nagasaki University, Japan) ● Design, synthesis and antiviral evaluation of novel heterocyclic compounds as HIV-1 NNRTIs by Xinyong Liu (Shandong University, China) ● Antiviral drug screening from microbial products by Eisaku Tsujii (Astellas Pharma Inc., Japan) ● Viral factors that determine the natural course of chronic hepatitis B viral infection by Hiroshi Yotsuyanagi (The University of Tokyo, Japan) ● Effect of andrographolide derivatives having α-glucosidase inhibition, on HBsAg, HBeAg secretion in HepG2 2.2.15 cells by Hongmin Liu (Zhengzhou University, China) ● Current and future antiviral therapy for influenza by Hideki Asanuma (Tokai University, Japan) ● Establishment of an HIV-based pseudotyping system as a safe model for screening inhibitors on bird flu H5N1 entry by Ying Guo (Peking Union Medical Collegee Chinese Academy of Medical Sciences, China) ● Strategy of discovery for novel antibiotics using silkworm infection model by Hiroshi Hamamoto (The University of Tokyo, Japan) ● Potent neuraminidase inhibitors and anti-inflammatory substances from Chaenomeles speciosa by Li Zhang (Chinese Academy of Medical Sciences and Peking Union Medical College, China) ● High-throughput screening assay for hepatitis C virus helicase inhibitors using fluorescence-quenching phenomenon by Hidenori Tani (Waseda University and National Institute of Advanced Industrial Science and Technology, Japan) Session VI. Biochemistry/Molecular Biology/Pharmacology ● A novel conjugate of low-molecular-weight heparin and Cu,Zn-superoxide dismutase: Study on its mechanism in preventing brain reperfusion injury after ischemia in gerbils by Fengshan Wang (Shandong University, China) ● A novel gene fudoh in SCCmec region regulates the colony spreading ability and virulence in Staphylococcus aureus by Chikara Kaito (The University of Tokyo, Japan) ● Water soluble fluorescent boronic acid sensors for tumor cell-surface saccharide by Hao Fang (Shandong Unviersity, China) ● Molecular characterization of the biosynthetic enzyme for the biotechnological production of tetrahydrocannabinol, the active constituent of marijuana by Futoshi Taura (Kyushu University, Japan) ● Galloyl cyclic-imide derivative CH1104I inhibits tumor invasion via suppressing matrix metalloproteinase activity by Xianjun Qu (Shandong University, China) ● Neuroprotection by inhibition of GAPDH-MAO B mediated cell death induced by ethanol by Xiao-Ming Ou (University of Mississippi Medical Center, USA).